Query 045145
Match_columns 270
No_of_seqs 119 out of 138
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 10:16:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045145.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045145hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03180 reversibly glycosylat 100.0 7.7E-91 1.7E-95 649.6 19.3 270 1-270 3-303 (346)
2 PF03214 RGP: Reversibly glyco 100.0 3.1E-87 6.6E-92 624.3 17.6 269 1-270 1-304 (348)
3 PF03385 DUF288: Protein of un 99.8 9.4E-22 2E-26 186.3 5.3 66 201-266 1-67 (390)
4 PF00535 Glycos_transf_2: Glyc 98.9 4.9E-10 1.1E-14 89.3 2.3 80 12-91 1-94 (169)
5 cd06437 CESA_CaSu_A2 Cellulose 98.9 8.4E-09 1.8E-13 89.9 9.6 79 10-90 2-102 (232)
6 cd06433 GT_2_WfgS_like WfgS an 98.9 1.9E-09 4.1E-14 89.3 4.2 80 12-91 1-91 (202)
7 cd06420 GT2_Chondriotin_Pol_N 98.8 4.3E-09 9.3E-14 87.2 3.4 88 13-107 1-104 (182)
8 PRK10073 putative glycosyl tra 98.8 6.7E-09 1.5E-13 97.6 5.1 81 10-90 7-100 (328)
9 cd02520 Glucosylceramide_synth 98.8 1.5E-08 3.3E-13 86.5 6.9 81 10-90 2-101 (196)
10 cd06442 DPM1_like DPM1_like re 98.8 4.7E-09 1E-13 89.8 3.7 87 13-106 1-102 (224)
11 cd06427 CESA_like_2 CESA_like_ 98.8 9.8E-09 2.1E-13 90.4 5.6 82 10-91 2-100 (241)
12 cd06421 CESA_CelA_like CESA_Ce 98.8 1.1E-08 2.5E-13 87.8 5.5 81 10-90 2-99 (234)
13 cd04196 GT_2_like_d Subfamily 98.7 9.5E-09 2.1E-13 86.7 4.9 79 12-90 1-94 (214)
14 cd02522 GT_2_like_a GT_2_like_ 98.7 1.6E-08 3.6E-13 86.3 5.8 80 11-90 1-87 (221)
15 COG0463 WcaA Glycosyltransfera 98.7 1.8E-08 3.8E-13 78.3 4.4 82 9-91 3-98 (291)
16 cd02510 pp-GalNAc-T pp-GalNAc- 98.7 1.4E-08 3E-13 92.7 4.5 80 12-91 1-99 (299)
17 PRK10063 putative glycosyl tra 98.7 2.1E-08 4.6E-13 90.6 5.1 81 10-90 2-97 (248)
18 cd02525 Succinoglycan_BP_ExoA 98.7 2.2E-08 4.7E-13 86.4 4.9 89 10-105 1-104 (249)
19 PLN02726 dolichyl-phosphate be 98.7 1.6E-08 3.4E-13 89.6 4.1 90 1-90 1-108 (243)
20 cd06434 GT2_HAS Hyaluronan syn 98.7 3.3E-08 7.2E-13 85.3 6.0 82 10-91 1-93 (235)
21 cd02511 Beta4Glucosyltransfera 98.6 2.8E-08 6E-13 87.6 4.7 81 10-90 1-86 (229)
22 cd04195 GT2_AmsE_like GT2_AmsE 98.6 1.4E-08 3E-13 85.7 2.1 79 12-90 1-95 (201)
23 cd06423 CESA_like CESA_like is 98.6 3E-08 6.5E-13 78.6 3.6 78 13-90 1-93 (180)
24 PRK10018 putative glycosyl tra 98.6 5.7E-08 1.2E-12 89.9 5.5 82 10-91 6-101 (279)
25 cd04192 GT_2_like_e Subfamily 98.6 5.7E-08 1.2E-12 82.8 4.5 86 13-105 1-105 (229)
26 PF13641 Glyco_tranf_2_3: Glyc 98.6 1.3E-07 2.8E-12 81.5 6.2 198 10-244 2-221 (228)
27 cd04184 GT2_RfbC_Mx_like Myxoc 98.5 1.5E-07 3.3E-12 79.2 6.2 81 10-90 2-98 (202)
28 cd06439 CESA_like_1 CESA_like_ 98.5 1E-07 2.2E-12 83.5 5.2 81 10-90 30-124 (251)
29 cd04186 GT_2_like_c Subfamily 98.5 1.2E-07 2.6E-12 76.3 5.1 78 13-90 1-89 (166)
30 cd06913 beta3GnTL1_like Beta 1 98.5 5.1E-08 1.1E-12 84.2 3.2 78 13-90 1-99 (219)
31 cd04179 DPM_DPG-synthase_like 98.5 9.6E-08 2.1E-12 79.1 3.2 78 13-90 1-94 (185)
32 cd04185 GT_2_like_b Subfamily 98.4 2.6E-07 5.7E-12 78.3 4.9 78 13-90 1-94 (202)
33 cd06435 CESA_NdvC_like NdvC_li 98.4 3.2E-07 7E-12 79.6 5.3 78 12-90 1-99 (236)
34 TIGR03472 HpnI hopanoid biosyn 98.4 2.5E-07 5.5E-12 88.0 4.7 90 10-107 42-151 (373)
35 cd04187 DPM1_like_bac Bacteria 98.4 2.5E-07 5.3E-12 77.3 3.7 78 13-90 1-95 (181)
36 PF10111 Glyco_tranf_2_2: Glyc 98.4 3.8E-07 8.3E-12 83.6 5.2 87 12-105 1-111 (281)
37 PRK11204 N-glycosyltransferase 98.4 3.6E-07 7.7E-12 87.3 4.9 81 10-90 55-149 (420)
38 cd06438 EpsO_like EpsO protein 98.4 3.5E-07 7.5E-12 77.2 4.2 78 13-90 1-96 (183)
39 TIGR03469 HonB hopene-associat 98.4 3.5E-07 7.7E-12 87.4 4.4 84 8-91 39-149 (384)
40 PRK10714 undecaprenyl phosphat 98.3 4.9E-07 1.1E-11 85.1 4.9 85 7-91 4-106 (325)
41 cd04188 DPG_synthase DPG_synth 98.3 3.6E-07 7.7E-12 78.5 3.6 78 13-90 1-97 (211)
42 PRK13915 putative glucosyl-3-p 98.3 5.7E-07 1.2E-11 84.2 4.5 82 9-90 31-131 (306)
43 cd02526 GT2_RfbF_like RfbF is 98.3 7.2E-07 1.6E-11 77.1 4.5 78 13-90 1-90 (237)
44 PRK14583 hmsR N-glycosyltransf 98.3 7.4E-07 1.6E-11 86.8 4.8 81 10-90 76-170 (444)
45 TIGR03111 glyc2_xrt_Gpos1 puta 98.2 9.5E-07 2.1E-11 86.1 4.6 89 10-105 50-154 (439)
46 PTZ00260 dolichyl-phosphate be 98.2 8E-07 1.7E-11 84.0 3.9 82 10-91 71-178 (333)
47 PRK11498 bcsA cellulose syntha 98.2 2.3E-06 4.9E-11 90.5 5.5 81 10-90 261-354 (852)
48 cd06436 GlcNAc-1-P_transferase 98.1 3.6E-06 7.9E-11 72.0 4.7 78 13-90 1-104 (191)
49 cd02514 GT13_GLCNAC-TI GT13_GL 98.0 6.5E-06 1.4E-10 78.7 4.6 81 11-91 2-113 (334)
50 TIGR03030 CelA cellulose synth 97.9 2E-05 4.4E-10 81.7 5.8 81 10-90 132-243 (713)
51 cd04190 Chitin_synth_C C-termi 97.6 6.9E-05 1.5E-09 66.8 4.7 66 13-90 1-88 (244)
52 cd00761 Glyco_tranf_GTA_type G 97.6 8.3E-05 1.8E-09 57.3 3.9 78 13-90 1-92 (156)
53 KOG2977 Glycosyltransferase [G 97.5 5.2E-05 1.1E-09 71.4 2.4 77 10-88 68-170 (323)
54 cd04191 Glucan_BSP_ModH Glucan 97.4 0.00025 5.4E-09 64.9 5.0 81 11-91 1-111 (254)
55 COG1215 Glycosyltransferases, 97.4 0.00015 3.2E-09 68.8 3.6 83 9-91 54-153 (439)
56 TIGR01556 rhamnosyltran L-rham 97.3 0.00038 8.2E-09 62.8 4.9 74 17-90 2-88 (281)
57 COG1216 Predicted glycosyltran 97.1 0.00099 2.1E-08 61.6 5.7 88 9-105 3-107 (305)
58 PRK14716 bacteriophage N4 adso 96.7 0.0014 3E-08 66.0 4.0 83 9-91 66-174 (504)
59 KOG2978 Dolichol-phosphate man 96.2 0.0014 3E-08 59.0 0.2 82 9-90 3-103 (238)
60 PRK05454 glucosyltransferase M 96.1 0.013 2.8E-07 61.3 6.8 83 8-90 123-235 (691)
61 cd00218 GlcAT-I Beta1,3-glucur 95.1 0.021 4.5E-07 52.2 3.4 99 11-118 3-129 (223)
62 KOG1476 Beta-1,3-glucuronyltra 94.4 0.059 1.3E-06 51.6 4.8 101 8-117 86-214 (330)
63 PLN02458 transferase, transfer 93.8 0.057 1.2E-06 52.0 3.4 99 11-118 114-236 (346)
64 PRK11234 nfrB bacteriophage N4 92.4 0.11 2.5E-06 54.6 3.5 82 10-91 64-171 (727)
65 PF13733 Glyco_transf_7N: N-te 89.5 0.5 1.1E-05 40.2 4.1 70 8-91 46-127 (136)
66 PRK14503 mannosyl-3-phosphogly 89.1 0.54 1.2E-05 46.1 4.5 81 9-90 51-175 (393)
67 PRK15489 nfrB bacteriophage N4 88.5 0.6 1.3E-05 49.2 4.7 83 9-91 71-179 (703)
68 TIGR02460 osmo_MPGsynth mannos 88.3 0.65 1.4E-05 45.3 4.5 81 9-90 50-174 (381)
69 PF09488 Osmo_MPGsynth: Mannos 88.2 0.47 1E-05 46.4 3.4 81 9-90 50-174 (381)
70 PF13704 Glyco_tranf_2_4: Glyc 87.1 0.54 1.2E-05 35.8 2.6 72 19-91 2-87 (97)
71 cd00899 b4GalT Beta-4-Galactos 86.9 1.5 3.2E-05 40.0 5.7 69 9-91 2-82 (219)
72 PF03071 GNT-I: GNT-I family; 84.5 0.58 1.3E-05 46.7 2.0 82 10-91 94-207 (434)
73 KOG3738 Predicted polypeptide 80.7 1.7 3.7E-05 43.5 3.6 81 11-91 126-220 (559)
74 PF03360 Glyco_transf_43: Glyc 78.3 1.3 2.8E-05 40.1 1.8 83 28-119 5-112 (207)
75 PRK14502 bifunctional mannosyl 77.2 2.1 4.5E-05 45.2 3.1 82 9-91 55-180 (694)
76 COG4092 Predicted glycosyltran 76.7 4.3 9.3E-05 38.7 4.8 42 57-105 71-117 (346)
77 PF13712 Glyco_tranf_2_5: Glyc 74.5 7.2 0.00016 34.9 5.5 62 14-90 3-69 (217)
78 KOG3916 UDP-Gal:glucosylcerami 74.0 7.7 0.00017 37.9 5.9 73 5-91 147-231 (372)
79 PF11316 Rhamno_transf: Putati 62.7 11 0.00024 34.5 4.2 86 32-124 57-166 (234)
80 PF01762 Galactosyl_T: Galacto 58.3 6.9 0.00015 33.8 2.0 48 164-214 139-187 (195)
81 PF11051 Mannosyl_trans3: Mann 55.6 11 0.00024 34.8 3.0 60 33-92 31-107 (271)
82 KOG3737 Predicted polypeptide 42.5 15 0.00032 37.0 1.7 81 11-91 157-256 (603)
83 PF13506 Glyco_transf_21: Glyc 29.0 41 0.00089 28.9 2.2 127 70-231 25-152 (175)
84 COG2943 MdoH Membrane glycosyl 27.3 97 0.0021 32.6 4.7 83 8-91 143-256 (736)
85 KOG3736 Polypeptide N-acetylga 26.0 43 0.00092 34.9 2.0 82 10-91 143-242 (578)
86 KOG4074 Leucine zipper nuclear 21.9 44 0.00094 32.5 1.1 43 203-257 214-262 (383)
No 1
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=100.00 E-value=7.7e-91 Score=649.61 Aligned_cols=270 Identities=81% Similarity=1.465 Sum_probs=262.8
Q ss_pred CCCCCCCCCCeeEEEecccCHHHHHHhhcccCCeeEEEEecCCCccceeccCCCCc----------------CcCCCcch
Q 045145 1 MAQSPPLKDDLDIVIPTIRSLDFLEMWRPFFEPYHLIIIQDGDPTEVIRVPDGFDY----------------DCISYLDS 64 (270)
Q Consensus 1 ~~~~~~~~~~i~IVItTin~p~~L~~~~~~l~~~~lIVV~D~~tp~~~~l~~~~~~----------------~~lpf~~~ 64 (270)
|+++++++++++||||||++++||+.|++.|+++|+|+|.|+...+..+.++||++ ++|||+++
T Consensus 3 ~~~~~~~~~evdIVi~TI~~~~fL~~~r~~l~~~h~iiV~d~D~~~~~~~~~G~d~~vy~r~d~~~~Lg~~~~~Ip~~~~ 82 (346)
T PLN03180 3 VSPAPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKEIKVPEGFDYELYNRNDINRILGPKASCISFKDS 82 (346)
T ss_pred CccCCCCCCcceEEEeccCchhHHHHHHHhcCcccEEEEecCCcccceeccCCCceeecCHHHHHhhhcccccccccCcc
Confidence 57889999999999999999999999999999999999999999999999999887 67999999
Q ss_pred hhhhhhhheeccceEEEecCCccccCCCCCccchhhhhhhhcccc---------------CCCcccCCccccccCCccce
Q 045145 65 ACRCFAFLISKKKYIFTIDDDCFVAKDPSGKEINALAQHLQNLLT---------------DEADFVRGYPFSLREGVPTA 129 (270)
Q Consensus 65 arRN~GyL~A~a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~nl~~---------------~~~~wpRG~Pl~~~~g~~~~ 129 (270)
+|||||||+|+++|||++||||+|++++.|+.+|+++||+.||.+ ++++||||||||+|+|++++
T Consensus 83 a~R~fGyL~s~~~yivsiDDD~~Pa~d~~g~~i~~~~qH~~NL~~pstp~~fNtLYdp~r~g~~fvRGYPfS~R~gv~va 162 (346)
T PLN03180 83 ACRCFGYLVSKKKYIFTIDDDCFVAKDPSGKLINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGVPTA 162 (346)
T ss_pred cchhhhheeecceEEEEECCCCCCCCCCccccccHHHHHHHhcCCCCCCceeecccccCccCCcccCCCCccccCCcceE
Confidence 999999999999999999999999999999999999999998654 47999999999999999999
Q ss_pred eeeccccCCCCCCccccccCCCcccccccCceeecCCCceeeccchhhhhhhhhccchhhheecCCCCcccchhhHHHHH
Q 045145 130 VSHGRWLNIPDYDAPTQLVKPRERNSRYVDAVMTIPKGSLFPMCAMNLAFNRELIGPAIYFALTGNGQPIGRYDDMWAGW 209 (270)
Q Consensus 130 iqqGL~~~~PDvDAi~rl~~~~~~~~~f~~~~v~l~~gt~~P~nsqNt~f~r~a~gpa~~~~~~~~~~~~~R~~DIwrgy 209 (270)
||||||+|+|||||||||+++.+++++|++++||+|.|||+||||||||||||++|||||+++|++|+.++|++|||+||
T Consensus 163 iS~GLWln~PD~DA~t~l~k~~e~~t~yvdavvtip~gt~~pv~~~NlAF~ReligPA~y~g~m~~g~~i~R~dDiWsG~ 242 (346)
T PLN03180 163 VSHGLWLNIPDYDAPTQLVKPLERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGW 242 (346)
T ss_pred EecccccCCCcccchhhhccchhccceecccEEeccCCCEeecccchhhhhhhhcchhheecccCCCCcccchhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceEEecCeEEecCCCCcccchHhhhccccccccHHHHhhcCCCCCCCcCC
Q 045145 210 RVKVVCDHLNLGVKTGLPYVWHNKASNPFVNLKKEYNGLFWQEEIIPFFQSLVLPKECTTA 270 (270)
Q Consensus 210 ~~qri~~~~G~~v~f~~P~v~~~r~h~~l~Dl~~E~~~~~~~~~i~~fl~~~~l~~~~~~~ 270 (270)
|+|+||+|+|++|++|.|+|+|+|.||+|+||++|++|++++|+|++|||+++||++|+|+
T Consensus 243 c~K~i~dhLG~gVktG~Pyv~h~k~~n~~~dL~~E~~Gi~l~E~i~~ff~~~~l~~~a~t~ 303 (346)
T PLN03180 243 CAKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQSVRLPKEAVTV 303 (346)
T ss_pred HHHHHHHHhCcceecCCceEecCCcccHHHHHHhhccCeechHHHHHHHHhccCCcccCcH
Confidence 9999999999999999999999999999999999999999999999999999999999984
No 2
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=100.00 E-value=3.1e-87 Score=624.29 Aligned_cols=269 Identities=64% Similarity=1.146 Sum_probs=258.2
Q ss_pred CCCCCCCCCCeeEEEeccc-CH-HHHHHhhcccCCeeEEEEecCCCccceeccCCCCc---------------CcCCCcc
Q 045145 1 MAQSPPLKDDLDIVIPTIR-SL-DFLEMWRPFFEPYHLIIIQDGDPTEVIRVPDGFDY---------------DCISYLD 63 (270)
Q Consensus 1 ~~~~~~~~~~i~IVItTin-~p-~~L~~~~~~l~~~~lIVV~D~~tp~~~~l~~~~~~---------------~~lpf~~ 63 (270)
||+ +|+++|++|||+|++ +. +||+.|++.|++||||||.|+..++.+++|+||++ .+|||++
T Consensus 1 ~~~-~~~~~~~divi~~~~~~l~~~~~~wr~~~~~~hliiv~d~~~~~~~~~p~g~~~~~y~~~di~~~lg~~~~i~~~~ 79 (348)
T PF03214_consen 1 MSL-EILDDEVDIVIPALRPNLTDFLEEWRPFFSPYHLIIVQDPDPNEEIKVPEGFDYEVYNRNDIERVLGAKTLIPFKG 79 (348)
T ss_pred CCc-ccccCcccEEeecccccHHHHHHHHHHhhcceeEEEEeCCCccccccCCcccceeeecHhhHHhhcCCcccccccc
Confidence 777 999999999999999 88 99999999999999999999999999999999998 7899999
Q ss_pred hhhhhhhhheeccceEEEecCCccccCCCCCccchhhhhhhhcccc---------------CCCcccCCccccccCCccc
Q 045145 64 SACRCFAFLISKKKYIFTIDDDCFVAKDPSGKEINALAQHLQNLLT---------------DEADFVRGYPFSLREGVPT 128 (270)
Q Consensus 64 ~arRN~GyL~A~a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~nl~~---------------~~~~wpRG~Pl~~~~g~~~ 128 (270)
++|||||||+|+++|||++||||+|++|+.|.+++.++||+.|+.+ ++++||||||||+|+|+++
T Consensus 80 ~a~R~fGyL~s~~~yivsiDDD~~P~~D~~g~~~~~v~qh~~~~~~~st~~~fNtLyd~~~e~~~f~RGyPfS~Regv~~ 159 (348)
T PF03214_consen 80 DACRNFGYLVSKKDYIVSIDDDCLPAKDDFGTHIDAVAQHVENLSTPSTPFFFNTLYDPYREGADFPRGYPFSLREGVDT 159 (348)
T ss_pred cchhhhHhhhcccceEEEEccccccccCCccceehhhhccceeeeccCchhhhhhhcccccccCcccCCCCcccccCCce
Confidence 9999999999999999999999999999999999999999987533 5789999999999999999
Q ss_pred eeeeccccCCCCCCccccccCCCcccccccCceeecCCCceeeccchhhhhhhhhccchhhheecCCCCcccchh---hH
Q 045145 129 AVSHGRWLNIPDYDAPTQLVKPRERNSRYVDAVMTIPKGSLFPMCAMNLAFNRELIGPAIYFALTGNGQPIGRYD---DM 205 (270)
Q Consensus 129 ~iqqGL~~~~PDvDAi~rl~~~~~~~~~f~~~~v~l~~gt~~P~nsqNt~f~r~a~gpa~~~~~~~~~~~~~R~~---DI 205 (270)
+++||||+|+|||||||||+++.+++.+|+++++|+|+|||+|||||||||+||++||+||+.+|+.|+.++|++ ||
T Consensus 160 ~~s~GLWln~PD~DA~t~l~~~~~r~~~~~d~~~~~p~gt~~pv~s~NlAf~Relip~~~~~~~~~~~~~~~R~d~~gDI 239 (348)
T PF03214_consen 160 AASAGLWLNVPDLDAPTQLVKPTERNTRYVDAVLTIPRGTYLPVCSMNLAFDRELIPPAYYFPMMGNGWGIGRFDRFGDI 239 (348)
T ss_pred eeecccccCCcccchhhhhccchhccccccCceEEecCCCEeecccchhhhhhhhcChheecccccCCCcccccccchhH
Confidence 999999999999999999999999999999999999999999999999999999998888877788888888888 99
Q ss_pred HHHHHHHHHHHHcCCceEEecCeEEecCCCCcccchHhhhccccccccHHHHhhcCCCCCCCcCC
Q 045145 206 WAGWRVKVVCDHLNLGVKTGLPYVWHNKASNPFVNLKKEYNGLFWQEEIIPFFQSLVLPKECTTA 270 (270)
Q Consensus 206 wrgy~~qri~~~~G~~v~f~~P~v~~~r~h~~l~Dl~~E~~~~~~~~~i~~fl~~~~l~~~~~~~ 270 (270)
|+|||+|+||+|+|++|+||.|+|+|+++|++|+||++|++|++++|+|++|||++++|++|+++
T Consensus 240 WsG~f~k~~~d~Lg~~V~~G~P~v~H~~a~~~~~dL~~E~~Gi~l~E~i~~f~q~v~Ls~~A~t~ 304 (348)
T PF03214_consen 240 WSGYFLKVICDHLGHGVKTGLPYVWHNKAHNAFDDLKKEVPGIELNEDILPFFQSVKLSKTAVTV 304 (348)
T ss_pred HHHHHHHHHHHHcCCccccCCceEEecCCCchHHHHHhhccchhhHHHHHHHHhccCCCcccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999874
No 3
>PF03385 DUF288: Protein of unknown function, DUF288; InterPro: IPR005049 This is a protein family of unknown function.
Probab=99.84 E-value=9.4e-22 Score=186.35 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=64.5
Q ss_pred chhhHHHHHHHHHHHHHcCCceEEecCeEEecCC-CCcccchHhhhccccccccHHHHhhcCCCCCC
Q 045145 201 RYDDMWAGWRVKVVCDHLNLGVKTGLPYVWHNKA-SNPFVNLKKEYNGLFWQEEIIPFFQSLVLPKE 266 (270)
Q Consensus 201 R~~DIwrgy~~qri~~~~G~~v~f~~P~v~~~r~-h~~l~Dl~~E~~~~~~~~~i~~fl~~~~l~~~ 266 (270)
|++|||||||+|||||.+|++|+|+||+|+|.|| |+||+||++|+++|+.+++|++||++|+++.+
T Consensus 1 RvTDIWRSY~aQRLLW~~G~~VsF~PpnV~Q~RNaHdYLkDF~DEk~LY~~sG~LV~FL~~W~~~~~ 67 (390)
T PF03385_consen 1 RVTDIWRSYWAQRLLWLSGGTVSFVPPNVVQFRNAHDYLKDFKDEKDLYEDSGRLVEFLHEWRCSKG 67 (390)
T ss_pred CchhHHHHHHHHHHHHHcCCeEEEcCCceeecccccccccchHHHHHHHHhHHHHHHHHHhcCCCCC
Confidence 8999999999999999999999999999999999 99999999999999999999999999999864
No 4
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=98.92 E-value=4.9e-10 Score=89.29 Aligned_cols=80 Identities=25% Similarity=0.403 Sum_probs=60.9
Q ss_pred eEEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCCC-----Cc----CcCCCcchhhhhhhhheeccc
Q 045145 12 DIVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGF-----DY----DCISYLDSACRCFAFLISKKK 77 (270)
Q Consensus 12 ~IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~-----~~----~~lpf~~~arRN~GyL~A~a~ 77 (270)
||||||||+++.|+++++++ ..+|+|||+|++++++.+.++.+ .+ ..-.....+.+|.|+..|.++
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n~g~~~~~n~~~~~a~~~ 80 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQTDPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPENLGFSAARNRGIKHAKGE 80 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHHSGCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCCSHHHHHHHHHHHH--SS
T ss_pred CEEEEeeCCHHHHHHHHHHHhhccCCCEEEEEecccccccccccccccccccccccccccccccccccccccccccccee
Confidence 79999999998888888866 47899999999999888765443 22 112235789999999999999
Q ss_pred eEEEecCCccccCC
Q 045145 78 YIFTIDDDCFVAKD 91 (270)
Q Consensus 78 yI~~~DDDc~P~~~ 91 (270)
||+++|+|+++.++
T Consensus 81 ~i~~ld~D~~~~~~ 94 (169)
T PF00535_consen 81 YILFLDDDDIISPD 94 (169)
T ss_dssp EEEEEETTEEE-TT
T ss_pred EEEEeCCCceEcHH
Confidence 99999999999884
No 5
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=98.90 E-value=8.4e-09 Score=89.85 Aligned_cols=79 Identities=15% Similarity=0.271 Sum_probs=59.3
Q ss_pred CeeEEEecccCHHHHHHhhcccC-------CeeEEEEecCCCccceeccC---------CCCc------CcCCCcchhhh
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFFE-------PYHLIIIQDGDPTEVIRVPD---------GFDY------DCISYLDSACR 67 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l~-------~~~lIVV~D~~tp~~~~l~~---------~~~~------~~lpf~~~arR 67 (270)
.++||||+||..+.|.++++++. .+++|||+| ++-.+.+... +..+ +..++ +...+
T Consensus 2 ~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~G~-k~~a~ 79 (232)
T cd06437 2 MVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVEEYAAQGVNIKHVRRADRTGY-KAGAL 79 (232)
T ss_pred ceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHHHHhhcCCceEEEECCCCCCC-chHHH
Confidence 48999999999999999998772 368999988 6555543322 1122 22334 34568
Q ss_pred hhhhheeccceEEEecCCccccC
Q 045145 68 CFAFLISKKKYIFTIDDDCFVAK 90 (270)
Q Consensus 68 N~GyL~A~a~yI~~~DDDc~P~~ 90 (270)
|.|+-.|+++||+++|.|+.+.+
T Consensus 80 n~g~~~a~~~~i~~~DaD~~~~~ 102 (232)
T cd06437 80 AEGMKVAKGEYVAIFDADFVPPP 102 (232)
T ss_pred HHHHHhCCCCEEEEEcCCCCCCh
Confidence 99999999999999999999987
No 6
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.86 E-value=1.9e-09 Score=89.29 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=64.4
Q ss_pred eEEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCCCCc------CcCCCcchhhhhhhhheeccceEE
Q 045145 12 DIVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGFDY------DCISYLDSACRCFAFLISKKKYIF 80 (270)
Q Consensus 12 ~IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~~~------~~lpf~~~arRN~GyL~A~a~yI~ 80 (270)
+|||||||+++.|++++.++ .++|+|||+|+++.++.+.+..+.- ..-......++|.|+..|+++||+
T Consensus 1 sivi~~~n~~~~l~~~l~sl~~q~~~~~evivvDd~s~d~~~~~~~~~~~~~~~~~~~~~~g~~~a~n~~~~~a~~~~v~ 80 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGGSTDGTVDIIKKYEDKITYWISEPDKGIYDAMNKGIALATGDIIG 80 (202)
T ss_pred CEEEeccchHHHHHHHHHHHHhCCCCCceEEEEeCCCCccHHHHHHHhHhhcEEEEecCCcCHHHHHHHHHHHcCCCEEE
Confidence 68999999999999888866 3689999999999988766544311 112234578899999999999999
Q ss_pred EecCCccccCC
Q 045145 81 TIDDDCFVAKD 91 (270)
Q Consensus 81 ~~DDDc~P~~~ 91 (270)
++|+|+.+.++
T Consensus 81 ~ld~D~~~~~~ 91 (202)
T cd06433 81 FLNSDDTLLPG 91 (202)
T ss_pred EeCCCcccCch
Confidence 99999999884
No 7
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=98.77 E-value=4.3e-09 Score=87.23 Aligned_cols=88 Identities=24% Similarity=0.389 Sum_probs=68.4
Q ss_pred EEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCCC------Cc-----CcCCCcchhhhhhhhheecc
Q 045145 13 IVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGF------DY-----DCISYLDSACRCFAFLISKK 76 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~------~~-----~~lpf~~~arRN~GyL~A~a 76 (270)
||||+||+++.|+++++++ ..+|+|||+|+++..+.+....+ .+ ..-++...+.+|.|+-.|.+
T Consensus 1 ivip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~a~g 80 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLNQSILPFEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIAAAKG 80 (182)
T ss_pred CEEeecCChHHHHHHHHHHHhccCCCCEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHHHhcC
Confidence 6999999999899888877 37899999999988765544321 11 22345567789999999999
Q ss_pred ceEEEecCCccccCCCCCccchhhhhhhhcc
Q 045145 77 KYIFTIDDDCFVAKDPSGKEINALAQHLQNL 107 (270)
Q Consensus 77 ~yI~~~DDDc~P~~~~~g~~~d~v~~h~~nl 107 (270)
+||+++|+|+.+.+ +++++++..+
T Consensus 81 ~~i~~lD~D~~~~~-------~~l~~~~~~~ 104 (182)
T cd06420 81 DYLIFIDGDCIPHP-------DFIADHIELA 104 (182)
T ss_pred CEEEEEcCCcccCH-------HHHHHHHHHh
Confidence 99999999999977 5776666444
No 8
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.77 E-value=6.7e-09 Score=97.64 Aligned_cols=81 Identities=19% Similarity=0.265 Sum_probs=65.6
Q ss_pred CeeEEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCCCC-----c---CcCCCcchhhhhhhhheecc
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGFD-----Y---DCISYLDSACRCFAFLISKK 76 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~~-----~---~~lpf~~~arRN~GyL~A~a 76 (270)
.++||||+||..+.|++|++++ .++|+|||+|++|..+.++.+.+. + ..-.....++||.|.-.|.+
T Consensus 7 ~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi~~~n~G~~~arN~gl~~a~g 86 (328)
T PRK10073 7 KLSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQANAGVSVARNTGLAVATG 86 (328)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhCCCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEECCCCChHHHHHHHHHhCCC
Confidence 5999999999999999999877 489999999999988776554321 1 11122356789999999999
Q ss_pred ceEEEecCCccccC
Q 045145 77 KYIFTIDDDCFVAK 90 (270)
Q Consensus 77 ~yI~~~DDDc~P~~ 90 (270)
+||.|+|+|....+
T Consensus 87 ~yi~flD~DD~~~p 100 (328)
T PRK10073 87 KYVAFPDADDVVYP 100 (328)
T ss_pred CEEEEECCCCccCh
Confidence 99999999999877
No 9
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=98.77 E-value=1.5e-08 Score=86.53 Aligned_cols=81 Identities=14% Similarity=0.092 Sum_probs=59.8
Q ss_pred CeeEEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCCC-------Cc------CcCCCc-chhhhhhh
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGF-------DY------DCISYL-DSACRCFA 70 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~-------~~------~~lpf~-~~arRN~G 70 (270)
+++||||+||....|+++++++ +.+|+|||+|+++.++.+.++.+ .+ ...+.. +....|.|
T Consensus 2 ~vsviip~~n~~~~l~~~L~sl~~q~~~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~n~g 81 (196)
T cd02520 2 GVSILKPLCGVDPNLYENLESFFQQDYPKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGINPKVNNLIKG 81 (196)
T ss_pred CeEEEEecCCCCccHHHHHHHHHhccCCCeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHHHHHH
Confidence 4899999999886677777765 47999999999998877654321 11 112221 22345789
Q ss_pred hheeccceEEEecCCccccC
Q 045145 71 FLISKKKYIFTIDDDCFVAK 90 (270)
Q Consensus 71 yL~A~a~yI~~~DDDc~P~~ 90 (270)
+-.|.++|++++|+|+.+.+
T Consensus 82 ~~~a~~d~i~~~D~D~~~~~ 101 (196)
T cd02520 82 YEEARYDILVISDSDISVPP 101 (196)
T ss_pred HHhCCCCEEEEECCCceECh
Confidence 98889999999999999866
No 10
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=98.77 E-value=4.7e-09 Score=89.78 Aligned_cols=87 Identities=15% Similarity=0.179 Sum_probs=65.9
Q ss_pred EEEecccCHHHHHHhhccc------CCeeEEEEecCCCccceeccCCC----C---c--CcCCCcchhhhhhhhheeccc
Q 045145 13 IVIPTIRSLDFLEMWRPFF------EPYHLIIIQDGDPTEVIRVPDGF----D---Y--DCISYLDSACRCFAFLISKKK 77 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l------~~~~lIVV~D~~tp~~~~l~~~~----~---~--~~lpf~~~arRN~GyL~A~a~ 77 (270)
||||+||.++.|+++++++ ..+|+|||+|+++..+.++.+.+ + + ..-......++|.|+..|.++
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~n~G~~~a~n~g~~~a~gd 80 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALKGIDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGKRGLGSAYIEGFKAARGD 80 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhcCCCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCCCCChHHHHHHHHHHcCCC
Confidence 6999999998888877755 47899999999998887654432 1 1 112233568899999999999
Q ss_pred eEEEecCCccccCCCCCccchhhhhhhhc
Q 045145 78 YIFTIDDDCFVAKDPSGKEINALAQHLQN 106 (270)
Q Consensus 78 yI~~~DDDc~P~~~~~g~~~d~v~~h~~n 106 (270)
||+++|+|+.+.+ +.+...+..
T Consensus 81 ~i~~lD~D~~~~~-------~~l~~l~~~ 102 (224)
T cd06442 81 VIVVMDADLSHPP-------EYIPELLEA 102 (224)
T ss_pred EEEEEECCCCCCH-------HHHHHHHHH
Confidence 9999999999877 455555543
No 11
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=98.77 E-value=9.8e-09 Score=90.45 Aligned_cols=82 Identities=12% Similarity=0.200 Sum_probs=65.1
Q ss_pred CeeEEEecccCHHHHHHhhcccC-------CeeEEEEecCCCccceeccCCCC------cCc----CCCcchhhhhhhhh
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFFE-------PYHLIIIQDGDPTEVIRVPDGFD------YDC----ISYLDSACRCFAFL 72 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l~-------~~~lIVV~D~~tp~~~~l~~~~~------~~~----lpf~~~arRN~GyL 72 (270)
.++||||+||..+.|.++++++. .+|+|||+|+++..+.++++.+. +.. -......++|.|+.
T Consensus 2 ~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~~G~~~a~n~g~~ 81 (241)
T cd06427 2 VYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQPRTKPKACNYALA 81 (241)
T ss_pred eEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCCCCchHHHHHHHHH
Confidence 48999999999988888887662 37999999999998887665432 111 12234689999999
Q ss_pred eeccceEEEecCCccccCC
Q 045145 73 ISKKKYIFTIDDDCFVAKD 91 (270)
Q Consensus 73 ~A~a~yI~~~DDDc~P~~~ 91 (270)
.|+++||+++|+|+.+.++
T Consensus 82 ~a~gd~i~~~DaD~~~~~~ 100 (241)
T cd06427 82 FARGEYVVIYDAEDAPDPD 100 (241)
T ss_pred hcCCCEEEEEcCCCCCChH
Confidence 9999999999999999883
No 12
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=98.75 E-value=1.1e-08 Score=87.76 Aligned_cols=81 Identities=12% Similarity=0.147 Sum_probs=62.9
Q ss_pred CeeEEEecccCH-HHHHHhhccc-----CC--eeEEEEecCCCccceeccCCCCc---------CcCCCcchhhhhhhhh
Q 045145 10 DLDIVIPTIRSL-DFLEMWRPFF-----EP--YHLIIIQDGDPTEVIRVPDGFDY---------DCISYLDSACRCFAFL 72 (270)
Q Consensus 10 ~i~IVItTin~p-~~L~~~~~~l-----~~--~~lIVV~D~~tp~~~~l~~~~~~---------~~lpf~~~arRN~GyL 72 (270)
.++||||+||+. +.|+++++++ +. |++|||+|+++.++.++.+++.. ..-.-.+.+..|.|+-
T Consensus 2 ~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 81 (234)
T cd06421 2 TVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEYGYRYLTRPDNRHAKAGNLNNALA 81 (234)
T ss_pred ceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhcccCceEEEeCCCCCCcHHHHHHHHH
Confidence 489999999975 7888888766 34 89999999999998877665421 1111113445799998
Q ss_pred eeccceEEEecCCccccC
Q 045145 73 ISKKKYIFTIDDDCFVAK 90 (270)
Q Consensus 73 ~A~a~yI~~~DDDc~P~~ 90 (270)
.|.++||+++|+|+.+.+
T Consensus 82 ~a~~d~i~~lD~D~~~~~ 99 (234)
T cd06421 82 HTTGDFVAILDADHVPTP 99 (234)
T ss_pred hCCCCEEEEEccccCcCc
Confidence 889999999999999987
No 13
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.75 E-value=9.5e-09 Score=86.68 Aligned_cols=79 Identities=14% Similarity=0.134 Sum_probs=61.4
Q ss_pred eEEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCCCC------c----CcCCCcchhhhhhhhheecc
Q 045145 12 DIVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGFD------Y----DCISYLDSACRCFAFLISKK 76 (270)
Q Consensus 12 ~IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~~------~----~~lpf~~~arRN~GyL~A~a 76 (270)
+|||||||+.+.|+++++++ +++|+|||+|+++.++.++++.+. . ..-........|.|+..|.+
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~~q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~n~g~~~~~g 80 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSILAQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNLGVARNFESLLQAADG 80 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCccHHHHHHHHHHhCCC
Confidence 69999999999898888766 378999999999988876654321 1 11122345667789888899
Q ss_pred ceEEEecCCccccC
Q 045145 77 KYIFTIDDDCFVAK 90 (270)
Q Consensus 77 ~yI~~~DDDc~P~~ 90 (270)
+||+++|+|+...+
T Consensus 81 ~~v~~ld~Dd~~~~ 94 (214)
T cd04196 81 DYVFFCDQDDIWLP 94 (214)
T ss_pred CEEEEECCCcccCh
Confidence 99999999999877
No 14
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.73 E-value=1.6e-08 Score=86.26 Aligned_cols=80 Identities=13% Similarity=0.194 Sum_probs=64.1
Q ss_pred eeEEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCCCCc--CcCCCcchhhhhhhhheeccceEEEec
Q 045145 11 LDIVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGFDY--DCISYLDSACRCFAFLISKKKYIFTID 83 (270)
Q Consensus 11 i~IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~~~--~~lpf~~~arRN~GyL~A~a~yI~~~D 83 (270)
++||||+||.++.|+++++++ ..+++|||+|+++.++.++...... -..+-.....+|.|+..|.++||+++|
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~~q~~~~~evivvdd~s~d~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~~~i~~~D 80 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEIIVVDGGSTDGTVAIARSAGVVVISSPKGRARQMNAGAAAARGDWLLFLH 80 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHHhccCCCcEEEEEeCCCCccHHHHHhcCCeEEEeCCcCHHHHHHHHHHhccCCEEEEEc
Confidence 589999999998888877765 3689999999999888876655333 112233567889999999999999999
Q ss_pred CCccccC
Q 045145 84 DDCFVAK 90 (270)
Q Consensus 84 DDc~P~~ 90 (270)
+|+.+.+
T Consensus 81 ~D~~~~~ 87 (221)
T cd02522 81 ADTRLPP 87 (221)
T ss_pred CCCCCCh
Confidence 9999976
No 15
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.69 E-value=1.8e-08 Score=78.31 Aligned_cols=82 Identities=17% Similarity=0.232 Sum_probs=65.1
Q ss_pred CCeeEEEecccCHHHHHHhhcccC-----CeeEEEEecCCCccceeccCCCC-----c----CcCCCcchhhhhhhhhee
Q 045145 9 DDLDIVIPTIRSLDFLEMWRPFFE-----PYHLIIIQDGDPTEVIRVPDGFD-----Y----DCISYLDSACRCFAFLIS 74 (270)
Q Consensus 9 ~~i~IVItTin~p~~L~~~~~~l~-----~~~lIVV~D~~tp~~~~l~~~~~-----~----~~lpf~~~arRN~GyL~A 74 (270)
-+++|||||||+...|.++++++. .+|+|||+|+++-.+.+....+. . ..-.......+|.|+.++
T Consensus 3 ~~~siiip~~n~~~~l~~~l~s~~~q~~~~~eiivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (291)
T COG0463 3 PKVSVVIPTYNEEEYLPEALESLLNQTYKDFEIIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERNGGLGAARNAGLEYA 82 (291)
T ss_pred ccEEEEEeccchhhhHHHHHHHHHhhhhcceEEEEEeCCCCCChHHHHHHHhhhcceEEEeecccCCChHHHHHhhHHhc
Confidence 468999999999988888888663 47999999999988776544322 1 112344678899999999
Q ss_pred ccceEEEecCCccccCC
Q 045145 75 KKKYIFTIDDDCFVAKD 91 (270)
Q Consensus 75 ~a~yI~~~DDDc~P~~~ 91 (270)
.++|+.++|.|.. .+.
T Consensus 83 ~~~~~~~~d~d~~-~~~ 98 (291)
T COG0463 83 RGDYIVFLDADDQ-HPP 98 (291)
T ss_pred cCCEEEEEccCCC-CCH
Confidence 9999999999999 775
No 16
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=98.69 E-value=1.4e-08 Score=92.72 Aligned_cols=80 Identities=10% Similarity=-0.051 Sum_probs=62.1
Q ss_pred eEEEecccCH-HHHHHhhcccC-------CeeEEEEecCCCccceeccCC---------CCc--CcCCCcchhhhhhhhh
Q 045145 12 DIVIPTIRSL-DFLEMWRPFFE-------PYHLIIIQDGDPTEVIRVPDG---------FDY--DCISYLDSACRCFAFL 72 (270)
Q Consensus 12 ~IVItTin~p-~~L~~~~~~l~-------~~~lIVV~D~~tp~~~~l~~~---------~~~--~~lpf~~~arRN~GyL 72 (270)
||||||||.. +.|++|++++. .+|||||+|+++..+.+.... +.+ ..-.....+.+|.|..
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~ 80 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAGAR 80 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHHHH
Confidence 6999999999 99999988772 359999999998877654311 111 1123345678999999
Q ss_pred eeccceEEEecCCccccCC
Q 045145 73 ISKKKYIFTIDDDCFVAKD 91 (270)
Q Consensus 73 ~A~a~yI~~~DDDc~P~~~ 91 (270)
.|.++||+|+|+|+.+.++
T Consensus 81 ~A~gd~i~fLD~D~~~~~~ 99 (299)
T cd02510 81 AATGDVLVFLDSHCEVNVG 99 (299)
T ss_pred HccCCEEEEEeCCcccCcc
Confidence 9999999999999999763
No 17
>PRK10063 putative glycosyl transferase; Provisional
Probab=98.68 E-value=2.1e-08 Score=90.63 Aligned_cols=81 Identities=6% Similarity=0.105 Sum_probs=63.5
Q ss_pred CeeEEEecccCHHHHHHhhccc--------CCeeEEEEecCCCccceeccCCCC----cCc--CC-Ccchhhhhhhhhee
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFF--------EPYHLIIIQDGDPTEVIRVPDGFD----YDC--IS-YLDSACRCFAFLIS 74 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l--------~~~~lIVV~D~~tp~~~~l~~~~~----~~~--lp-f~~~arRN~GyL~A 74 (270)
+++|||||||..+.|+++++++ ..+|+|||+|+|+-.+.++++++. +.. .+ .-.++++|.|.-.|
T Consensus 2 ~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~~~i~~i~~~~~G~~~A~N~Gi~~a 81 (248)
T PRK10063 2 LLSVITVAFRNLEGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGIFNLRFVSEPDNGIYDAMNKGIAMA 81 (248)
T ss_pred eEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhcccCCEEEEECCCCCHHHHHHHHHHHc
Confidence 5899999999998888877765 258999999999998887665532 211 11 13557899999999
Q ss_pred ccceEEEecCCccccC
Q 045145 75 KKKYIFTIDDDCFVAK 90 (270)
Q Consensus 75 ~a~yI~~~DDDc~P~~ 90 (270)
.++||+++|.|....+
T Consensus 82 ~g~~v~~ld~DD~~~~ 97 (248)
T PRK10063 82 QGRFALFLNSGDIFHQ 97 (248)
T ss_pred CCCEEEEEeCCcccCc
Confidence 9999999998777766
No 18
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=98.68 E-value=2.2e-08 Score=86.41 Aligned_cols=89 Identities=15% Similarity=0.242 Sum_probs=66.6
Q ss_pred CeeEEEecccCHHHHHHhhccc-------CCeeEEEEecCCCccceeccCCCC-----c---CcCCCcchhhhhhhhhee
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFF-------EPYHLIIIQDGDPTEVIRVPDGFD-----Y---DCISYLDSACRCFAFLIS 74 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l-------~~~~lIVV~D~~tp~~~~l~~~~~-----~---~~lpf~~~arRN~GyL~A 74 (270)
.++|||||||+++.|.++++++ ..+++|||+|+++.++.+..+++. + ..-......++|.|+-.|
T Consensus 1 ~~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~~~~~a~N~g~~~a 80 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPKRIQSAGLNIGIRNS 80 (249)
T ss_pred CEEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCCCCchHHHHHHHHHh
Confidence 3799999999998888877766 257999999999887765543322 1 111122456799999999
Q ss_pred ccceEEEecCCccccCCCCCccchhhhhhhh
Q 045145 75 KKKYIFTIDDDCFVAKDPSGKEINALAQHLQ 105 (270)
Q Consensus 75 ~a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~ 105 (270)
.++|++++|+|+.+.+ +++++.+.
T Consensus 81 ~~d~v~~lD~D~~~~~-------~~l~~~~~ 104 (249)
T cd02525 81 RGDIIIRVDAHAVYPK-------DYILELVE 104 (249)
T ss_pred CCCEEEEECCCccCCH-------HHHHHHHH
Confidence 9999999999999876 46655543
No 19
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=98.67 E-value=1.6e-08 Score=89.58 Aligned_cols=90 Identities=12% Similarity=0.132 Sum_probs=64.8
Q ss_pred CCCCCCCCCCeeEEEecccCHHHHHHhhcc-------cCCeeEEEEecCCCccceeccCCC----C---cC----cCCCc
Q 045145 1 MAQSPPLKDDLDIVIPTIRSLDFLEMWRPF-------FEPYHLIIIQDGDPTEVIRVPDGF----D---YD----CISYL 62 (270)
Q Consensus 1 ~~~~~~~~~~i~IVItTin~p~~L~~~~~~-------l~~~~lIVV~D~~tp~~~~l~~~~----~---~~----~lpf~ 62 (270)
|+...-..-+++||||+||..+.|+.+++. ...+|+|||+|+++..+.++...+ + +. .-...
T Consensus 1 ~~~~~~~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n~G 80 (243)
T PLN02726 1 MEAPGEGAMKYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLG 80 (243)
T ss_pred CCCCCCCCceEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCCC
Confidence 344444455799999999988665554432 337899999999998887665432 1 11 11123
Q ss_pred chhhhhhhhheeccceEEEecCCccccC
Q 045145 63 DSACRCFAFLISKKKYIFTIDDDCFVAK 90 (270)
Q Consensus 63 ~~arRN~GyL~A~a~yI~~~DDDc~P~~ 90 (270)
..++.|.|+..|.++||+++|+|+.+.+
T Consensus 81 ~~~a~n~g~~~a~g~~i~~lD~D~~~~~ 108 (243)
T PLN02726 81 LGTAYIHGLKHASGDFVVIMDADLSHHP 108 (243)
T ss_pred HHHHHHHHHHHcCCCEEEEEcCCCCCCH
Confidence 4678899999999999999999999866
No 20
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=98.67 E-value=3.3e-08 Score=85.34 Aligned_cols=82 Identities=13% Similarity=0.199 Sum_probs=62.8
Q ss_pred CeeEEEecccCH-HHHHHhhcccC---CeeEEEEecCCCccceecc---CCCC-c---CcCCCcchhhhhhhhheeccce
Q 045145 10 DLDIVIPTIRSL-DFLEMWRPFFE---PYHLIIIQDGDPTEVIRVP---DGFD-Y---DCISYLDSACRCFAFLISKKKY 78 (270)
Q Consensus 10 ~i~IVItTin~p-~~L~~~~~~l~---~~~lIVV~D~~tp~~~~l~---~~~~-~---~~lpf~~~arRN~GyL~A~a~y 78 (270)
.++||||+||.+ +.|++|++++. .+++|||+|+++.++.+.+ .... + ..-.......+|.|+..|.++|
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~~~eiivvdd~s~d~~~~~l~~~~~~~~~~v~~~~~~g~~~a~n~g~~~a~~d~ 80 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQKPLEIIVVTDGDDEPYLSILSQTVKYGGIFVITVPHPGKRRALAEGIRHVTTDI 80 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCCCCEEEEEeCCCChHHHHHHHhhccCCcEEEEecCCCChHHHHHHHHHHhCCCE
Confidence 479999999998 99999998663 6899999999998877653 1111 1 0001124566788999999999
Q ss_pred EEEecCCccccCC
Q 045145 79 IFTIDDDCFVAKD 91 (270)
Q Consensus 79 I~~~DDDc~P~~~ 91 (270)
|+++|+||.+.++
T Consensus 81 v~~lD~D~~~~~~ 93 (235)
T cd06434 81 VVLLDSDTVWPPN 93 (235)
T ss_pred EEEECCCceeChh
Confidence 9999999999983
No 21
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.64 E-value=2.8e-08 Score=87.57 Aligned_cols=81 Identities=16% Similarity=0.202 Sum_probs=66.8
Q ss_pred CeeEEEecccCHHHHHHhhcccCCe--eEEEEecCCCccceeccCCCCc---CcCCCcchhhhhhhhheeccceEEEecC
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFFEPY--HLIIIQDGDPTEVIRVPDGFDY---DCISYLDSACRCFAFLISKKKYIFTIDD 84 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l~~~--~lIVV~D~~tp~~~~l~~~~~~---~~lpf~~~arRN~GyL~A~a~yI~~~DD 84 (270)
+++|||+|||..+.|++|++++..+ |+|||+|++|..+.++...++. ..-.......||.|...|.++||+++|.
T Consensus 1 ~isvii~~~Ne~~~l~~~l~sl~~~~~eiivvD~gStD~t~~i~~~~~~~v~~~~~~g~~~~~n~~~~~a~~d~vl~lDa 80 (229)
T cd02511 1 TLSVVIITKNEERNIERCLESVKWAVDEIIVVDSGSTDRTVEIAKEYGAKVYQRWWDGFGAQRNFALELATNDWVLSLDA 80 (229)
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhcccCEEEEEeCCCCccHHHHHHHcCCEEEECCCCChHHHHHHHHHhCCCCEEEEEeC
Confidence 4799999999999999999988654 9999999999988877665444 2211224588999999999999999999
Q ss_pred CccccC
Q 045145 85 DCFVAK 90 (270)
Q Consensus 85 Dc~P~~ 90 (270)
|..+.+
T Consensus 81 D~~~~~ 86 (229)
T cd02511 81 DERLTP 86 (229)
T ss_pred CcCcCH
Confidence 999877
No 22
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=98.62 E-value=1.4e-08 Score=85.66 Aligned_cols=79 Identities=10% Similarity=0.143 Sum_probs=59.6
Q ss_pred eEEEecccCH--HHHHHhhccc-----CCeeEEEEecCC-CccceeccCC----CCcCcC----CCcchhhhhhhhheec
Q 045145 12 DIVIPTIRSL--DFLEMWRPFF-----EPYHLIIIQDGD-PTEVIRVPDG----FDYDCI----SYLDSACRCFAFLISK 75 (270)
Q Consensus 12 ~IVItTin~p--~~L~~~~~~l-----~~~~lIVV~D~~-tp~~~~l~~~----~~~~~l----pf~~~arRN~GyL~A~ 75 (270)
+|||||||.. +.|+++++++ .++++|||+|++ +..+.++.+. .++..+ .-....++|.|+..|.
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~~i~~i~~~~n~G~~~a~N~g~~~a~ 80 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLPLKVVPLEKNRGLGKALNEGLKHCT 80 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCCcEEEEEECCCCchhHHHHHHHHHhcCCeEEEEcCccccHHHHHHHHHHhcC
Confidence 6999999975 6899999877 368999999998 5555544332 222111 1123678999999999
Q ss_pred cceEEEecCCccccC
Q 045145 76 KKYIFTIDDDCFVAK 90 (270)
Q Consensus 76 a~yI~~~DDDc~P~~ 90 (270)
++||+++|+|+++.+
T Consensus 81 gd~i~~lD~Dd~~~~ 95 (201)
T cd04195 81 YDWVARMDTDDISLP 95 (201)
T ss_pred CCEEEEeCCccccCc
Confidence 999999999999987
No 23
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=98.61 E-value=3e-08 Score=78.57 Aligned_cols=78 Identities=13% Similarity=0.224 Sum_probs=61.6
Q ss_pred EEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCCCC------c----CcCCCcchhhhhhhhheeccc
Q 045145 13 IVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGFD------Y----DCISYLDSACRCFAFLISKKK 77 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~~------~----~~lpf~~~arRN~GyL~A~a~ 77 (270)
|||||||+++.|.++++++ ..+++|||+|+++..+.+....+. . ..-......++|.|+..+.++
T Consensus 1 Viip~~n~~~~l~~~l~sl~~q~~~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~~~~~ 80 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKENGGKAGALNAGLRHAKGD 80 (180)
T ss_pred CeecccChHHHHHHHHHHHHhCCCCceEEEEEeCCCccchHHHHHHHhccccceEEEEEecccCCchHHHHHHHHhcCCC
Confidence 6899999998888888766 378999999999988776543321 1 112233678899999999999
Q ss_pred eEEEecCCccccC
Q 045145 78 YIFTIDDDCFVAK 90 (270)
Q Consensus 78 yI~~~DDDc~P~~ 90 (270)
||+++|+|+.+.+
T Consensus 81 ~i~~~D~D~~~~~ 93 (180)
T cd06423 81 IVVVLDADTILEP 93 (180)
T ss_pred EEEEECCCCCcCh
Confidence 9999999999977
No 24
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.59 E-value=5.7e-08 Score=89.89 Aligned_cols=82 Identities=21% Similarity=0.220 Sum_probs=60.7
Q ss_pred CeeEEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccce--eccCC-----CCc--CcCCCcchhhhhhhhheec
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVI--RVPDG-----FDY--DCISYLDSACRCFAFLISK 75 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~--~l~~~-----~~~--~~lpf~~~arRN~GyL~A~ 75 (270)
.++|||||||..+.|++++.++ ++||+|||+|+++..+. +..+. +.+ ..-....++++|.|.-.|.
T Consensus 6 ~VSVIip~yN~~~~l~~~l~Svl~Qt~~~~EiIVVDDgS~~~~~~~~~~~~~~~~ri~~i~~~~n~G~~~a~N~gi~~a~ 85 (279)
T PRK10018 6 LISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQ 85 (279)
T ss_pred EEEEEEEeCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHcC
Confidence 4999999999998888877654 58999999999983111 11111 111 1122335688999999999
Q ss_pred cceEEEecCCccccCC
Q 045145 76 KKYIFTIDDDCFVAKD 91 (270)
Q Consensus 76 a~yI~~~DDDc~P~~~ 91 (270)
++||.++|+|....++
T Consensus 86 g~~I~~lDaDD~~~p~ 101 (279)
T PRK10018 86 GEYITGIDDDDEWTPN 101 (279)
T ss_pred CCEEEEECCCCCCCcc
Confidence 9999999999998773
No 25
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.57 E-value=5.7e-08 Score=82.77 Aligned_cols=86 Identities=19% Similarity=0.333 Sum_probs=64.1
Q ss_pred EEEecccCHHHHHHhhccc-----CC--eeEEEEecCCCccceeccC------CCCcCcCC----Cc--chhhhhhhhhe
Q 045145 13 IVIPTIRSLDFLEMWRPFF-----EP--YHLIIIQDGDPTEVIRVPD------GFDYDCIS----YL--DSACRCFAFLI 73 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l-----~~--~~lIVV~D~~tp~~~~l~~------~~~~~~lp----f~--~~arRN~GyL~ 73 (270)
|||||||+++.|+++++++ .. +|+|||+|+++..+.++.. ...+..+. .. ....+|.|.-.
T Consensus 1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~~~~~g~~~a~n~g~~~ 80 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSRVSISGKKNALTTAIKA 80 (229)
T ss_pred CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccCcccchhHHHHHHHHHH
Confidence 6999999999899988877 34 8999999999888776543 11121121 11 33567888888
Q ss_pred eccceEEEecCCccccCCCCCccchhhhhhhh
Q 045145 74 SKKKYIFTIDDDCFVAKDPSGKEINALAQHLQ 105 (270)
Q Consensus 74 A~a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~ 105 (270)
|.++||+++|+|+.+.+ +.+++.+.
T Consensus 81 ~~~d~i~~~D~D~~~~~-------~~l~~l~~ 105 (229)
T cd04192 81 AKGDWIVTTDADCVVPS-------NWLLTFVA 105 (229)
T ss_pred hcCCEEEEECCCcccCH-------HHHHHHHH
Confidence 88999999999999987 56666554
No 26
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=98.55 E-value=1.3e-07 Score=81.50 Aligned_cols=198 Identities=16% Similarity=0.184 Sum_probs=92.6
Q ss_pred CeeEEEecccCHHHHHHhhcccC-----CeeEEEEecCCCccceeccCC----C---CcCcCCC-------cchhhhhhh
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFFE-----PYHLIIIQDGDPTEVIRVPDG----F---DYDCISY-------LDSACRCFA 70 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l~-----~~~lIVV~D~~tp~~~~l~~~----~---~~~~lpf-------~~~arRN~G 70 (270)
.++||||+||.++.|.++++++. +++++||+|+++.++.+..++ + .+..++. ......|.|
T Consensus 2 ~v~Vvip~~~~~~~l~~~l~sl~~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~n~~ 81 (228)
T PF13641_consen 2 RVSVVIPAYNEDDVLRRCLESLLAQDYPRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARALNEA 81 (228)
T ss_dssp -EEEE--BSS-HHHHHHHHHHHTTSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHHHHHH
T ss_pred EEEEEEEecCCHHHHHHHHHHHHcCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHHHHHH
Confidence 38999999999988888888773 789999999998887653321 1 1111111 123456888
Q ss_pred hheeccceEEEecCCccccCCCCCccchhhhhhhhccccCCCcccCCccccccCCccceeeeccccCCCCCCccccccCC
Q 045145 71 FLISKKKYIFTIDDDCFVAKDPSGKEINALAQHLQNLLTDEADFVRGYPFSLREGVPTAVSHGRWLNIPDYDAPTQLVKP 150 (270)
Q Consensus 71 yL~A~a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~nl~~~~~~wpRG~Pl~~~~g~~~~iqqGL~~~~PDvDAi~rl~~~ 150 (270)
+-.+.++||+++|+|+.+.+ +++.+-+..+...+..+.-|- ..-.++=-.+.++..-
T Consensus 82 ~~~~~~d~i~~lD~D~~~~p-------~~l~~~~~~~~~~~~~~v~~~----------------~~~~~~~~~~~~~~~~ 138 (228)
T PF13641_consen 82 LAAARGDYILFLDDDTVLDP-------DWLERLLAAFADPGVGAVGGP----------------VFPDNDRNWLTRLQDL 138 (228)
T ss_dssp HHH---SEEEEE-SSEEE-C-------HHHHHHHHHHHBSS--EEEEE----------------EEETTCCCEEEE-TT-
T ss_pred HHhcCCCEEEEECCCcEECH-------HHHHHHHHHHHhCCCCeEeee----------------EeecCCCCHHHHHHHH
Confidence 88888999999999999977 465543333311111110000 0001111112222111
Q ss_pred C--cccccccCceeecCCCceeeccchhhhhhhhhccchhhheecCCCCcccchhhHHHHHHHHHHHHHcCCceEEec-C
Q 045145 151 R--ERNSRYVDAVMTIPKGSLFPMCAMNLAFNRELIGPAIYFALTGNGQPIGRYDDMWAGWRVKVVCDHLNLGVKTGL-P 227 (270)
Q Consensus 151 ~--~~~~~f~~~~v~l~~gt~~P~nsqNt~f~r~a~gpa~~~~~~~~~~~~~R~~DIwrgy~~qri~~~~G~~v~f~~-P 227 (270)
. .....+.. ..-+.+ ..++++.|.+|.|++| -.+- .++ .....+|..-+.-+. ..|+.+.+.+ .
T Consensus 139 ~~~~~~~~~~~--~~~~~~-~~~~~G~~~~~rr~~~-~~~g--~fd---~~~~~eD~~l~~r~~----~~G~~~~~~~~~ 205 (228)
T PF13641_consen 139 FFARWHLRFRS--GRRALG-VAFLSGSGMLFRRSAL-EEVG--GFD---PFILGEDFDLCLRLR----AAGWRIVYAPDA 205 (228)
T ss_dssp -S-EETTTS-T--T-B-----S-B--TEEEEEHHHH-HHH---S-----SSSSSHHHHHHHHHH----HTT--EEEEEEE
T ss_pred HHhhhhhhhhh--hhcccc-eeeccCcEEEEEHHHH-HHhC--CCC---CCCcccHHHHHHHHH----HCCCcEEEECCc
Confidence 0 00011111 112223 3667899999999999 4431 111 123347875443333 3999999976 3
Q ss_pred eEEecCCCCcccchHhh
Q 045145 228 YVWHNKASNPFVNLKKE 244 (270)
Q Consensus 228 ~v~~~r~h~~l~Dl~~E 244 (270)
.|+|. .+..++++.++
T Consensus 206 ~v~~~-~~~~~~~~~~q 221 (228)
T PF13641_consen 206 LVYHE-EPSSLKAFFKQ 221 (228)
T ss_dssp EEEE---SSSTHHHHHH
T ss_pred EEEEe-CCCCHHHHHHH
Confidence 35555 33446666544
No 27
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=98.54 E-value=1.5e-07 Score=79.21 Aligned_cols=81 Identities=17% Similarity=0.151 Sum_probs=60.9
Q ss_pred CeeEEEecccCH-HHHHHhhccc-----CCeeEEEEecCCCcccee-ccCC-------CCcCcCC--Ccchhhhhhhhhe
Q 045145 10 DLDIVIPTIRSL-DFLEMWRPFF-----EPYHLIIIQDGDPTEVIR-VPDG-------FDYDCIS--YLDSACRCFAFLI 73 (270)
Q Consensus 10 ~i~IVItTin~p-~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~-l~~~-------~~~~~lp--f~~~arRN~GyL~ 73 (270)
+++||||+||+. +.|++++.++ ..+|+|||+|+++..+.+ +.+. ..+-..+ -.....+|.|+-.
T Consensus 2 ~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~ 81 (202)
T cd04184 2 LISIVMPVYNTPEKYLREAIESVRAQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREENGGISAATNSALEL 81 (202)
T ss_pred eEEEEEecccCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccCCCHHHHHHHHHHh
Confidence 489999999998 9898888766 368999999999875432 2221 1111111 1235779999999
Q ss_pred eccceEEEecCCccccC
Q 045145 74 SKKKYIFTIDDDCFVAK 90 (270)
Q Consensus 74 A~a~yI~~~DDDc~P~~ 90 (270)
|.++||.++|+|+.+.+
T Consensus 82 a~~d~i~~ld~D~~~~~ 98 (202)
T cd04184 82 ATGEFVALLDHDDELAP 98 (202)
T ss_pred hcCCEEEEECCCCcCCh
Confidence 99999999999999987
No 28
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=98.54 E-value=1e-07 Score=83.51 Aligned_cols=81 Identities=12% Similarity=0.169 Sum_probs=64.1
Q ss_pred CeeEEEecccCHHHHHHhhcccC-----C--eeEEEEecCCCccceeccCCCC---c----CcCCCcchhhhhhhhheec
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFFE-----P--YHLIIIQDGDPTEVIRVPDGFD---Y----DCISYLDSACRCFAFLISK 75 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l~-----~--~~lIVV~D~~tp~~~~l~~~~~---~----~~lpf~~~arRN~GyL~A~ 75 (270)
.++||||+||+.+.|+++++++. . +|+|||+|+++..+.++...+. + ..-.......+|.|+..|.
T Consensus 30 ~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~v~~i~~~~~~g~~~a~n~gi~~a~ 109 (251)
T cd06439 30 TVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADKGVKLLRFPERRGKAAALNRALALAT 109 (251)
T ss_pred EEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhCcEEEEEcCCCCChHHHHHHHHHHcC
Confidence 49999999999988888877652 3 8999999999988876655432 2 1112335677899999999
Q ss_pred cceEEEecCCccccC
Q 045145 76 KKYIFTIDDDCFVAK 90 (270)
Q Consensus 76 a~yI~~~DDDc~P~~ 90 (270)
++||+++|+|+.+.+
T Consensus 110 ~d~i~~lD~D~~~~~ 124 (251)
T cd06439 110 GEIVVFTDANALLDP 124 (251)
T ss_pred CCEEEEEccccCcCH
Confidence 999999999999976
No 29
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.53 E-value=1.2e-07 Score=76.30 Aligned_cols=78 Identities=14% Similarity=0.214 Sum_probs=62.6
Q ss_pred EEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCCCC--c----CcCCCcchhhhhhhhheeccceEEE
Q 045145 13 IVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGFD--Y----DCISYLDSACRCFAFLISKKKYIFT 81 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~~--~----~~lpf~~~arRN~GyL~A~a~yI~~ 81 (270)
||||+||+++.|++++.++ ..+++|||+|+++.++.+....+. + ..-.......+|.|+-.|.++||++
T Consensus 1 vii~~~~~~~~l~~~l~sl~~~~~~~~~iiivdd~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~n~~~~~~~~~~i~~ 80 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRELFPEVRLIRNGENLGFGAGNNQGIREAKGDYVLL 80 (166)
T ss_pred CEEEecCCHHHHHHHHHHHHhccCCCeEEEEEECCCCchHHHHHHHhCCCeEEEecCCCcChHHHhhHHHhhCCCCEEEE
Confidence 6899999999998888877 368999999999988766543321 1 1223446788999999999999999
Q ss_pred ecCCccccC
Q 045145 82 IDDDCFVAK 90 (270)
Q Consensus 82 ~DDDc~P~~ 90 (270)
+|+|+.+.+
T Consensus 81 ~D~D~~~~~ 89 (166)
T cd04186 81 LNPDTVVEP 89 (166)
T ss_pred ECCCcEECc
Confidence 999999977
No 30
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=98.53 E-value=5.1e-08 Score=84.19 Aligned_cols=78 Identities=14% Similarity=0.170 Sum_probs=60.9
Q ss_pred EEEecccCHHHHHHhhccc-----C-CeeEEEEecCCCccceeccCCCC-------cC------cCC--Ccchhhhhhhh
Q 045145 13 IVIPTIRSLDFLEMWRPFF-----E-PYHLIIIQDGDPTEVIRVPDGFD-------YD------CIS--YLDSACRCFAF 71 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l-----~-~~~lIVV~D~~tp~~~~l~~~~~-------~~------~lp--f~~~arRN~Gy 71 (270)
||||+||..+.|++|++++ . .+|+|||+|+++..+.++.+.+. +. ..+ -.-..+||.|.
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N~g~ 80 (219)
T cd06913 1 IILPVHNGEQWLDECLESVLQQDFEGTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKNQAI 80 (219)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCCCCCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCCCccHHHHHHHHH
Confidence 6999999999999998877 2 58999999999988876554321 10 011 12356889999
Q ss_pred heeccceEEEecCCccccC
Q 045145 72 LISKKKYIFTIDDDCFVAK 90 (270)
Q Consensus 72 L~A~a~yI~~~DDDc~P~~ 90 (270)
..|.++||.++|+|..+.+
T Consensus 81 ~~a~gd~i~~lD~D~~~~~ 99 (219)
T cd06913 81 AQSSGRYLCFLDSDDVMMP 99 (219)
T ss_pred HhcCCCEEEEECCCccCCh
Confidence 9999999999999999877
No 31
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.47 E-value=9.6e-08 Score=79.13 Aligned_cols=78 Identities=15% Similarity=0.228 Sum_probs=61.0
Q ss_pred EEEecccCHHHHHHhhccc-------CCeeEEEEecCCCccceeccCCCCc---------CcCCCcchhhhhhhhheecc
Q 045145 13 IVIPTIRSLDFLEMWRPFF-------EPYHLIIIQDGDPTEVIRVPDGFDY---------DCISYLDSACRCFAFLISKK 76 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l-------~~~~lIVV~D~~tp~~~~l~~~~~~---------~~lpf~~~arRN~GyL~A~a 76 (270)
||||+||.++.|++++.++ ..+|+|||+|+++..+.+....+.. ..-.....+++|.|+..|.+
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G~~~a~n~g~~~a~g 80 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFGKGAAVRAGFKAARG 80 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCCccHHHHHHHHHhcC
Confidence 6899999998888777755 2799999999998887764432111 12223467899999999999
Q ss_pred ceEEEecCCccccC
Q 045145 77 KYIFTIDDDCFVAK 90 (270)
Q Consensus 77 ~yI~~~DDDc~P~~ 90 (270)
+||+++|+|+.+.+
T Consensus 81 d~i~~lD~D~~~~~ 94 (185)
T cd04179 81 DIVVTMDADLQHPP 94 (185)
T ss_pred CEEEEEeCCCCCCH
Confidence 99999999999876
No 32
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.43 E-value=2.6e-07 Score=78.29 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=58.7
Q ss_pred EEEecccCHHHHHHhhcccC-----CeeEEEEecCCCccceeccCCCC----c----CcCCCcchhhhhhhhhee---cc
Q 045145 13 IVIPTIRSLDFLEMWRPFFE-----PYHLIIIQDGDPTEVIRVPDGFD----Y----DCISYLDSACRCFAFLIS---KK 76 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l~-----~~~lIVV~D~~tp~~~~l~~~~~----~----~~lpf~~~arRN~GyL~A---~a 76 (270)
|||||||+++.|+.+++++. .+++|||+|+++..+.+....+. + ..-....+..+|.|+..| .+
T Consensus 1 viI~~~n~~~~l~~~l~sl~~q~~~~~eiiivD~~s~d~t~~~~~~~~~~~~i~~~~~~~n~g~~~~~n~~~~~a~~~~~ 80 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALLAQTRPPDHIIVIDNASTDGTAEWLTSLGDLDNIVYLRLPENLGGAGGFYEGVRRAYELGY 80 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHHhccCCCceEEEEECCCCcchHHHHHHhcCCCceEEEECccccchhhHHHHHHHHHhccCC
Confidence 68999999999999988773 67999999999988877654322 1 111122345677777765 48
Q ss_pred ceEEEecCCccccC
Q 045145 77 KYIFTIDDDCFVAK 90 (270)
Q Consensus 77 ~yI~~~DDDc~P~~ 90 (270)
+|++++|+|+.+.+
T Consensus 81 d~v~~ld~D~~~~~ 94 (202)
T cd04185 81 DWIWLMDDDAIPDP 94 (202)
T ss_pred CEEEEeCCCCCcCh
Confidence 99999999999987
No 33
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=98.42 E-value=3.2e-07 Score=79.56 Aligned_cols=78 Identities=15% Similarity=0.236 Sum_probs=58.2
Q ss_pred eEEEecccCH-HHHHHhhccc-----CCeeEEEEecCCCccce-e----ccCC----CCc----CcCCCcchhhhhhhhh
Q 045145 12 DIVIPTIRSL-DFLEMWRPFF-----EPYHLIIIQDGDPTEVI-R----VPDG----FDY----DCISYLDSACRCFAFL 72 (270)
Q Consensus 12 ~IVItTin~p-~~L~~~~~~l-----~~~~lIVV~D~~tp~~~-~----l~~~----~~~----~~lpf~~~arRN~GyL 72 (270)
|||||+||.. +.|+++++++ +.+|+|||+|+++..+. + +..+ +.+ +..++ ...++|.|+-
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~~G~-~~~a~n~g~~ 79 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGA-KAGALNYALE 79 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCCcEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCC-chHHHHHHHH
Confidence 6999999985 8899988876 36899999999986652 2 2111 111 22344 3567899998
Q ss_pred eec--cceEEEecCCccccC
Q 045145 73 ISK--KKYIFTIDDDCFVAK 90 (270)
Q Consensus 73 ~A~--a~yI~~~DDDc~P~~ 90 (270)
.|. ++||+++|+|+.+.+
T Consensus 80 ~a~~~~d~i~~lD~D~~~~~ 99 (236)
T cd06435 80 RTAPDAEIIAVIDADYQVEP 99 (236)
T ss_pred hcCCCCCEEEEEcCCCCcCH
Confidence 876 699999999999987
No 34
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=98.40 E-value=2.5e-07 Score=87.95 Aligned_cols=90 Identities=16% Similarity=0.097 Sum_probs=61.9
Q ss_pred CeeEEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCC----C---Cc----C--cCCC--cchhhhhh
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDG----F---DY----D--CISY--LDSACRCF 69 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~----~---~~----~--~lpf--~~~arRN~ 69 (270)
.++||||++|..+.|++|++++ +.+|+||++|+++-.+.++.+. + .+ . ..+. +..++.|
T Consensus 42 ~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K~~~l~~- 120 (373)
T TIGR03472 42 PVSVLKPLHGDEPELYENLASFCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHGPNRKVSNLIN- 120 (373)
T ss_pred CeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCCCChHHHHHHH-
Confidence 4999999999988888888876 4689999999887766554322 1 11 1 1122 1223333
Q ss_pred hhheeccceEEEecCCccccCCCCCccchhhhhhhhcc
Q 045145 70 AFLISKKKYIFTIDDDCFVAKDPSGKEINALAQHLQNL 107 (270)
Q Consensus 70 GyL~A~a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~nl 107 (270)
++-.|+++||+++|+||.+.+ |++++-+..+
T Consensus 121 ~~~~a~ge~i~~~DaD~~~~p-------~~L~~lv~~~ 151 (373)
T TIGR03472 121 MLPHARHDILVIADSDISVGP-------DYLRQVVAPL 151 (373)
T ss_pred HHHhccCCEEEEECCCCCcCh-------hHHHHHHHHh
Confidence 455678999999999999977 5665544444
No 35
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.39 E-value=2.5e-07 Score=77.32 Aligned_cols=78 Identities=15% Similarity=0.198 Sum_probs=59.2
Q ss_pred EEEecccCHHHHHHhhccc--------CCeeEEEEecCCCccceeccCCC-----Cc----CcCCCcchhhhhhhhheec
Q 045145 13 IVIPTIRSLDFLEMWRPFF--------EPYHLIIIQDGDPTEVIRVPDGF-----DY----DCISYLDSACRCFAFLISK 75 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l--------~~~~lIVV~D~~tp~~~~l~~~~-----~~----~~lpf~~~arRN~GyL~A~ 75 (270)
|||||||..+.|.++++++ ..+|+|||+|+++.++.+....+ .+ ..-.+...+++|.|...|.
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n~G~~~a~n~g~~~a~ 80 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRNFGQQAALLAGLDHAR 80 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCCCCcHHHHHHHHHhcC
Confidence 6899999997777665543 36899999999998876544321 11 1223446788899999999
Q ss_pred cceEEEecCCccccC
Q 045145 76 KKYIFTIDDDCFVAK 90 (270)
Q Consensus 76 a~yI~~~DDDc~P~~ 90 (270)
++||+++|+|+.+.+
T Consensus 81 ~d~i~~~D~D~~~~~ 95 (181)
T cd04187 81 GDAVITMDADLQDPP 95 (181)
T ss_pred CCEEEEEeCCCCCCH
Confidence 999999999999866
No 36
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=98.38 E-value=3.8e-07 Score=83.55 Aligned_cols=87 Identities=18% Similarity=0.385 Sum_probs=64.7
Q ss_pred eEEEecccCH------HHHHHhhccc------CCeeEEEEecCCCccce----eccCC--CC-c-----CcCCCcchhhh
Q 045145 12 DIVIPTIRSL------DFLEMWRPFF------EPYHLIIIQDGDPTEVI----RVPDG--FD-Y-----DCISYLDSACR 67 (270)
Q Consensus 12 ~IVItTin~p------~~L~~~~~~l------~~~~lIVV~D~~tp~~~----~l~~~--~~-~-----~~lpf~~~arR 67 (270)
|||||..++. +-|+.|+..+ .++++|||+|++..+.- ++.+. +. + ...+|..+.+|
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~~~~f~~a~ar 80 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDNGEPFSRAKAR 80 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCCCCCcCHHHHH
Confidence 6999999876 3344445544 37899999999987741 12222 22 1 23468899999
Q ss_pred hhhhheeccceEEEecCCccccCCCCCccchhhhhhhh
Q 045145 68 CFAFLISKKKYIFTIDDDCFVAKDPSGKEINALAQHLQ 105 (270)
Q Consensus 68 N~GyL~A~a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~ 105 (270)
|+|...|.++||+|+|.||++.+ ++++..+.
T Consensus 81 N~g~~~A~~d~l~flD~D~i~~~-------~~i~~~~~ 111 (281)
T PF10111_consen 81 NIGAKYARGDYLIFLDADCIPSP-------DFIEKLLN 111 (281)
T ss_pred HHHHHHcCCCEEEEEcCCeeeCH-------HHHHHHHH
Confidence 99999999999999999999988 56666655
No 37
>PRK11204 N-glycosyltransferase; Provisional
Probab=98.37 E-value=3.6e-07 Score=87.28 Aligned_cols=81 Identities=16% Similarity=0.255 Sum_probs=64.0
Q ss_pred CeeEEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCCC----C-c---C-cCCCcchhhhhhhhheec
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGF----D-Y---D-CISYLDSACRCFAFLISK 75 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~----~-~---~-~lpf~~~arRN~GyL~A~ 75 (270)
.++||||+||..+.++++++++ +.+|+|||+|++++++.+..+.+ + + . .-.-.+..++|.|.-.|.
T Consensus 55 ~vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~Gka~aln~g~~~a~ 134 (420)
T PRK11204 55 GVSILVPCYNEGENVEETISHLLALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAENQGKANALNTGAAAAR 134 (420)
T ss_pred CEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCCCCHHHHHHHHHHHcC
Confidence 4899999999998888888765 36899999999999887654321 1 1 1 111236678899999999
Q ss_pred cceEEEecCCccccC
Q 045145 76 KKYIFTIDDDCFVAK 90 (270)
Q Consensus 76 a~yI~~~DDDc~P~~ 90 (270)
++|++++|+|+.+.+
T Consensus 135 ~d~i~~lDaD~~~~~ 149 (420)
T PRK11204 135 SEYLVCIDGDALLDP 149 (420)
T ss_pred CCEEEEECCCCCCCh
Confidence 999999999999987
No 38
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=98.37 E-value=3.5e-07 Score=77.19 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=59.0
Q ss_pred EEEecccCHHHHHHhhccc-------CCeeEEEEecCCCccceeccCCCCc------CcCCCcchhhhhhhhheec----
Q 045145 13 IVIPTIRSLDFLEMWRPFF-------EPYHLIIIQDGDPTEVIRVPDGFDY------DCISYLDSACRCFAFLISK---- 75 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l-------~~~~lIVV~D~~tp~~~~l~~~~~~------~~lpf~~~arRN~GyL~A~---- 75 (270)
||||+||..+.|.++++++ ..+|+|||+|+++..+.++...+.. ..-......++|.|+..|.
T Consensus 1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~~~~~~~~~~~~~~~gk~~aln~g~~~a~~~~~ 80 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARAAGATVLERHDPERRGKGYALDFGFRHLLNLAD 80 (183)
T ss_pred CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHHcCCeEEEeCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 6999999998777777765 2479999999999888876544322 1112235567888887663
Q ss_pred -cceEEEecCCccccC
Q 045145 76 -KKYIFTIDDDCFVAK 90 (270)
Q Consensus 76 -a~yI~~~DDDc~P~~ 90 (270)
++|++++|.|+.+.+
T Consensus 81 ~~d~v~~~DaD~~~~p 96 (183)
T cd06438 81 DPDAVVVFDADNLVDP 96 (183)
T ss_pred CCCEEEEEcCCCCCCh
Confidence 899999999999988
No 39
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=98.36 E-value=3.5e-07 Score=87.40 Aligned_cols=84 Identities=12% Similarity=0.162 Sum_probs=64.3
Q ss_pred CCCeeEEEecccCHHHHHHhhcccC------CeeEEEEecCCCccceeccCCC--------Cc---C--cCC--Cc-chh
Q 045145 8 KDDLDIVIPTIRSLDFLEMWRPFFE------PYHLIIIQDGDPTEVIRVPDGF--------DY---D--CIS--YL-DSA 65 (270)
Q Consensus 8 ~~~i~IVItTin~p~~L~~~~~~l~------~~~lIVV~D~~tp~~~~l~~~~--------~~---~--~lp--f~-~~a 65 (270)
.-+++||||++|..+.|++|++++. .+|+|||+|+++..+.++.+.+ .+ . ..| +. +..
T Consensus 39 ~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~~ 118 (384)
T TIGR03469 39 WPAVVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGWSGKLW 118 (384)
T ss_pred CCCEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCCcchHH
Confidence 3359999999999999999998772 5899999999998887654322 11 1 111 21 334
Q ss_pred hhhhhhheec-----cceEEEecCCccccCC
Q 045145 66 CRCFAFLISK-----KKYIFTIDDDCFVAKD 91 (270)
Q Consensus 66 rRN~GyL~A~-----a~yI~~~DDDc~P~~~ 91 (270)
+.|.|+..|+ ++||+++|+||.+.++
T Consensus 119 A~n~g~~~A~~~~~~gd~llflDaD~~~~p~ 149 (384)
T TIGR03469 119 AVSQGIAAARTLAPPADYLLLTDADIAHGPD 149 (384)
T ss_pred HHHHHHHHHhccCCCCCEEEEECCCCCCChh
Confidence 6889999998 9999999999999873
No 40
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=98.34 E-value=4.9e-07 Score=85.09 Aligned_cols=85 Identities=18% Similarity=0.192 Sum_probs=63.0
Q ss_pred CCCCeeEEEecccCHHHHHHhhccc--------CCeeEEEEecCCCccceeccCCC----C--c----CcCCCcchhhhh
Q 045145 7 LKDDLDIVIPTIRSLDFLEMWRPFF--------EPYHLIIIQDGDPTEVIRVPDGF----D--Y----DCISYLDSACRC 68 (270)
Q Consensus 7 ~~~~i~IVItTin~p~~L~~~~~~l--------~~~~lIVV~D~~tp~~~~l~~~~----~--~----~~lpf~~~arRN 68 (270)
...+++||||+||..+.|..+++.+ .++|+|||+|+++-.++++...+ + + ..-.+-..++.|
T Consensus 4 ~~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n~G~~~A~~ 83 (325)
T PRK10714 4 PIKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRNYGQHSAIM 83 (325)
T ss_pred CCCeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCCCCHHHHHH
Confidence 3456999999999886555555433 37899999999998887754221 1 1 122344567888
Q ss_pred hhhheeccceEEEecCCccccCC
Q 045145 69 FAFLISKKKYIFTIDDDCFVAKD 91 (270)
Q Consensus 69 ~GyL~A~a~yI~~~DDDc~P~~~ 91 (270)
.|+..|.++|++++|+|+...++
T Consensus 84 ~G~~~A~gd~vv~~DaD~q~~p~ 106 (325)
T PRK10714 84 AGFSHVTGDLIITLDADLQNPPE 106 (325)
T ss_pred HHHHhCCCCEEEEECCCCCCCHH
Confidence 99999999999999999997663
No 41
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=98.34 E-value=3.6e-07 Score=78.48 Aligned_cols=78 Identities=18% Similarity=0.153 Sum_probs=60.0
Q ss_pred EEEecccCHHHHHHhhccc---------CCeeEEEEecCCCccceeccCCC----C----c--CcCCCcchhhhhhhhhe
Q 045145 13 IVIPTIRSLDFLEMWRPFF---------EPYHLIIIQDGDPTEVIRVPDGF----D----Y--DCISYLDSACRCFAFLI 73 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l---------~~~~lIVV~D~~tp~~~~l~~~~----~----~--~~lpf~~~arRN~GyL~ 73 (270)
||||+||..+.|++|++++ ..+|+|||+|+++..+.++...+ + + ..-.....++.|.|+..
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~~~g~~~ 80 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPKNRGKGGAVRAGMLA 80 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcccCCCcHHHHHHHHHH
Confidence 6999999887776666544 37899999999998887654332 1 1 11223467888999999
Q ss_pred eccceEEEecCCccccC
Q 045145 74 SKKKYIFTIDDDCFVAK 90 (270)
Q Consensus 74 A~a~yI~~~DDDc~P~~ 90 (270)
|.++||+++|+|+...+
T Consensus 81 a~gd~i~~ld~D~~~~~ 97 (211)
T cd04188 81 ARGDYILFADADLATPF 97 (211)
T ss_pred hcCCEEEEEeCCCCCCH
Confidence 99999999999999877
No 42
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=98.31 E-value=5.7e-07 Score=84.23 Aligned_cols=82 Identities=10% Similarity=0.142 Sum_probs=61.1
Q ss_pred CCeeEEEecccCHHHHHHhhcccC-------CeeEEEEecCCCccceeccCCCCc------Cc---CCCc--chhhhhhh
Q 045145 9 DDLDIVIPTIRSLDFLEMWRPFFE-------PYHLIIIQDGDPTEVIRVPDGFDY------DC---ISYL--DSACRCFA 70 (270)
Q Consensus 9 ~~i~IVItTin~p~~L~~~~~~l~-------~~~lIVV~D~~tp~~~~l~~~~~~------~~---lpf~--~~arRN~G 70 (270)
-+++||||+||..+.|.++++++. .+|+|||+|+++-.+.++..++.. .. .+.+ ...+.|.|
T Consensus 31 ~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~Gkg~A~~~g 110 (306)
T PRK13915 31 RTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAAGARVVSREEILPELPPRPGKGEALWRS 110 (306)
T ss_pred CCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHhcchhhcchhhhhccccCCCHHHHHHHH
Confidence 359999999999877777766552 479999999999888766544322 11 1222 44667889
Q ss_pred hheeccceEEEecCCcc-ccC
Q 045145 71 FLISKKKYIFTIDDDCF-VAK 90 (270)
Q Consensus 71 yL~A~a~yI~~~DDDc~-P~~ 90 (270)
+..|.++||+++|+|+. +.+
T Consensus 111 ~~~a~gd~vv~lDaD~~~~~p 131 (306)
T PRK13915 111 LAATTGDIVVFVDADLINFDP 131 (306)
T ss_pred HHhcCCCEEEEEeCccccCCH
Confidence 88889999999999997 444
No 43
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=98.29 E-value=7.2e-07 Score=77.10 Aligned_cols=78 Identities=8% Similarity=0.003 Sum_probs=60.2
Q ss_pred EEEecccCH-HHHHHhhcccC--CeeEEEEecCCCccceeccCC--CCc----CcCCCcchhhhhhhhheecc---ceEE
Q 045145 13 IVIPTIRSL-DFLEMWRPFFE--PYHLIIIQDGDPTEVIRVPDG--FDY----DCISYLDSACRCFAFLISKK---KYIF 80 (270)
Q Consensus 13 IVItTin~p-~~L~~~~~~l~--~~~lIVV~D~~tp~~~~l~~~--~~~----~~lpf~~~arRN~GyL~A~a---~yI~ 80 (270)
+||||||.. +.|++|++++. .+++|||+|++++++....+. -.+ ..-......++|.|+..|.+ +||+
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q~~~iivvDn~s~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~N~g~~~a~~~~~d~v~ 80 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQVDKVVVVDNSSGNDIELRLRLNSEKIELIHLGENLGIAKALNIGIKAALENGADYVL 80 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhccCCEEEEEeCCCCccHHHHhhccCCcEEEEECCCceehHHhhhHHHHHHHhCCCCEEE
Confidence 489999999 99999999874 589999999988776544331 111 11122367889999999876 9999
Q ss_pred EecCCccccC
Q 045145 81 TIDDDCFVAK 90 (270)
Q Consensus 81 ~~DDDc~P~~ 90 (270)
++|+|+.+.+
T Consensus 81 ~lD~D~~~~~ 90 (237)
T cd02526 81 LFDQDSVPPP 90 (237)
T ss_pred EECCCCCcCH
Confidence 9999999987
No 44
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=98.28 E-value=7.4e-07 Score=86.77 Aligned_cols=81 Identities=16% Similarity=0.169 Sum_probs=63.1
Q ss_pred CeeEEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCCC-------Cc--CcCCCcchhhhhhhhheec
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGF-------DY--DCISYLDSACRCFAFLISK 75 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~-------~~--~~lpf~~~arRN~GyL~A~ 75 (270)
.++||||+||....++++++++ +++|+|||+|+++.++.+..+++ .+ ..-.-.++..+|.|...|.
T Consensus 76 ~vsViIP~yNE~~~i~~~l~sll~q~yp~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~n~Gka~AlN~gl~~a~ 155 (444)
T PRK14583 76 LVSILVPCFNEGLNARETIHAALAQTYTNIEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAHNQGKAIALRMGAAAAR 155 (444)
T ss_pred cEEEEEEeCCCHHHHHHHHHHHHcCCCCCeEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCCCCCHHHHHHHHHHhCC
Confidence 4999999999997787777765 47899999999998876544321 11 1112236778899999999
Q ss_pred cceEEEecCCccccC
Q 045145 76 KKYIFTIDDDCFVAK 90 (270)
Q Consensus 76 a~yI~~~DDDc~P~~ 90 (270)
++|++++|+|+.+.+
T Consensus 156 ~d~iv~lDAD~~~~~ 170 (444)
T PRK14583 156 SEYLVCIDGDALLDK 170 (444)
T ss_pred CCEEEEECCCCCcCH
Confidence 999999999999988
No 45
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=98.24 E-value=9.5e-07 Score=86.06 Aligned_cols=89 Identities=21% Similarity=0.211 Sum_probs=66.7
Q ss_pred CeeEEEecccCHHHHHHhhcccC-------CeeEEEEecCCCccceeccCC-------CCcCcC--CCcchhhhhhhhhe
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFFE-------PYHLIIIQDGDPTEVIRVPDG-------FDYDCI--SYLDSACRCFAFLI 73 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l~-------~~~lIVV~D~~tp~~~~l~~~-------~~~~~l--pf~~~arRN~GyL~ 73 (270)
.++||||+||..+.|.++++++. .+|+|||+|+++.++.+..+. ..+..+ .-..+.++|.|.-.
T Consensus 50 ~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~~~~~~~Gka~AlN~gl~~ 129 (439)
T TIGR03111 50 DITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRYMNSDQGKAKALNAAIYN 129 (439)
T ss_pred CEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 49999999999999998888762 368999999999888654321 111111 12356778999999
Q ss_pred eccceEEEecCCccccCCCCCccchhhhhhhh
Q 045145 74 SKKKYIFTIDDDCFVAKDPSGKEINALAQHLQ 105 (270)
Q Consensus 74 A~a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~ 105 (270)
|.++||+++|.|+.|.+ |++++.+.
T Consensus 130 s~g~~v~~~DaD~~~~~-------d~L~~l~~ 154 (439)
T TIGR03111 130 SIGKYIIHIDSDGKLHK-------DAIKNMVT 154 (439)
T ss_pred ccCCEEEEECCCCCcCh-------HHHHHHHH
Confidence 99999999999999977 46654443
No 46
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=98.24 E-value=8e-07 Score=84.02 Aligned_cols=82 Identities=30% Similarity=0.420 Sum_probs=61.7
Q ss_pred CeeEEEecccCHHHHHHhhccc----C---------CeeEEEEecCCCccceeccCCC---------CcC----cCCCcc
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFF----E---------PYHLIIIQDGDPTEVIRVPDGF---------DYD----CISYLD 63 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l----~---------~~~lIVV~D~~tp~~~~l~~~~---------~~~----~lpf~~ 63 (270)
.++||||+||..+.|+++++.+ . .+|+|||+|+|+..+.++...+ ++. ......
T Consensus 71 ~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~N~G~ 150 (333)
T PTZ00260 71 DLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLRNKGK 150 (333)
T ss_pred EEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCCCCCh
Confidence 4999999999886666655533 1 6899999999999888754322 121 122346
Q ss_pred hhhhhhhhheeccceEEEecCCccccCC
Q 045145 64 SACRCFAFLISKKKYIFTIDDDCFVAKD 91 (270)
Q Consensus 64 ~arRN~GyL~A~a~yI~~~DDDc~P~~~ 91 (270)
.++.|.|+..|.++||+++|.|+....+
T Consensus 151 ~~A~~~Gi~~a~gd~I~~~DaD~~~~~~ 178 (333)
T PTZ00260 151 GGAVRIGMLASRGKYILMVDADGATDID 178 (333)
T ss_pred HHHHHHHHHHccCCEEEEEeCCCCCCHH
Confidence 6788899999999999999999987663
No 47
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=98.15 E-value=2.3e-06 Score=90.47 Aligned_cols=81 Identities=15% Similarity=0.161 Sum_probs=63.1
Q ss_pred CeeEEEecccCH-HHHHHhhccc-------CCeeEEEEecCCCccceeccCCCCc-----CcCCCcchhhhhhhhheecc
Q 045145 10 DLDIVIPTIRSL-DFLEMWRPFF-------EPYHLIIIQDGDPTEVIRVPDGFDY-----DCISYLDSACRCFAFLISKK 76 (270)
Q Consensus 10 ~i~IVItTin~p-~~L~~~~~~l-------~~~~lIVV~D~~tp~~~~l~~~~~~-----~~lpf~~~arRN~GyL~A~a 76 (270)
.++|+|||||.+ +.+++.+.++ +.+|++|+||+++++..++.+++++ +.-.-.++...|.|.-.+++
T Consensus 261 ~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~la~~~~v~yI~R~~n~~gKAGnLN~aL~~a~G 340 (852)
T PRK11498 261 TVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQEVGVKYIARPTHEHAKAGNINNALKYAKG 340 (852)
T ss_pred cEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHHHHHHCCcEEEEeCCCCcchHHHHHHHHHhCCC
Confidence 499999999988 6666555433 2589999999999998877766555 11122345677899999999
Q ss_pred ceEEEecCCccccC
Q 045145 77 KYIFTIDDDCFVAK 90 (270)
Q Consensus 77 ~yI~~~DDDc~P~~ 90 (270)
|||+++|.|++|.+
T Consensus 341 EyIavlDAD~ip~p 354 (852)
T PRK11498 341 EFVAIFDCDHVPTR 354 (852)
T ss_pred CEEEEECCCCCCCh
Confidence 99999999999988
No 48
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=98.10 E-value=3.6e-06 Score=71.98 Aligned_cols=78 Identities=10% Similarity=0.159 Sum_probs=59.5
Q ss_pred EEEecccCHHHHHHhhccc----CCeeEEEEecCCCccceeccC-CC---CcCcC-------CCcchhhhhhhhheec--
Q 045145 13 IVIPTIRSLDFLEMWRPFF----EPYHLIIIQDGDPTEVIRVPD-GF---DYDCI-------SYLDSACRCFAFLISK-- 75 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l----~~~~lIVV~D~~tp~~~~l~~-~~---~~~~l-------pf~~~arRN~GyL~A~-- 75 (270)
||||+||..+.|+++++++ ..+++|||+|+++..+.+... .. .+..+ .-....++|.|+-.+.
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~~~~~~eIivvdd~S~D~t~~~~~~~~~~~~v~~i~~~~~~~~~Gk~~aln~g~~~~~~~ 80 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLRNKPNFLVLVIDDASDDDTAGIVRLAITDSRVHLLRRHLPNARTGKGDALNAAYDQIRQI 80 (191)
T ss_pred CEEeccccHHHHHHHHHHHHhCCCCeEEEEEECCCCcCHHHHHhheecCCcEEEEeccCCcCCCCHHHHHHHHHHHHhhh
Confidence 6999999998888888866 368999999999998887665 11 11111 1235678899987764
Q ss_pred ---------cceEEEecCCccccC
Q 045145 76 ---------KKYIFTIDDDCFVAK 90 (270)
Q Consensus 76 ---------a~yI~~~DDDc~P~~ 90 (270)
++||+++|.|+.+.+
T Consensus 81 ~~~~g~~~~~d~v~~~DaD~~~~~ 104 (191)
T cd06436 81 LIEEGADPERVIIAVIDADGRLDP 104 (191)
T ss_pred ccccccCCCccEEEEECCCCCcCH
Confidence 379999999999988
No 49
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.99 E-value=6.5e-06 Score=78.75 Aligned_cols=81 Identities=22% Similarity=0.310 Sum_probs=56.9
Q ss_pred eeEEEecccCHHHHHHhhcccC-------CeeEEEEecCCCccceeccCCC--Cc-----CcCCCcc------------h
Q 045145 11 LDIVIPTIRSLDFLEMWRPFFE-------PYHLIIIQDGDPTEVIRVPDGF--DY-----DCISYLD------------S 64 (270)
Q Consensus 11 i~IVItTin~p~~L~~~~~~l~-------~~~lIVV~D~~tp~~~~l~~~~--~~-----~~lpf~~------------~ 64 (270)
+.|||.+||+|+.|++++++|. .++|+|.+||+.+++.+....+ .+ .....+. -
T Consensus 2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~i 81 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYRI 81 (334)
T ss_pred cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhhHH
Confidence 5699999999999999988772 6789999999988766554333 22 1111111 1
Q ss_pred h-----hhhhhhheeccceEEEecCCccccCC
Q 045145 65 A-----CRCFAFLISKKKYIFTIDDDCFVAKD 91 (270)
Q Consensus 65 a-----rRN~GyL~A~a~yI~~~DDDc~P~~~ 91 (270)
+ +.|.++-.+..+++|++||||.+.++
T Consensus 82 a~hyk~aln~vF~~~~~~~vIILEDDl~~sPd 113 (334)
T cd02514 82 ARHYKWALTQTFNLFGYSFVIILEDDLDIAPD 113 (334)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCccCHh
Confidence 1 34444433348999999999999994
No 50
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=97.85 E-value=2e-05 Score=81.71 Aligned_cols=81 Identities=14% Similarity=0.131 Sum_probs=57.1
Q ss_pred CeeEEEecccCH-HHHHHhhccc-----C--CeeEEEEecCCCcccee------------------ccCCCCc-----Cc
Q 045145 10 DLDIVIPTIRSL-DFLEMWRPFF-----E--PYHLIIIQDGDPTEVIR------------------VPDGFDY-----DC 58 (270)
Q Consensus 10 ~i~IVItTin~p-~~L~~~~~~l-----~--~~~lIVV~D~~tp~~~~------------------l~~~~~~-----~~ 58 (270)
.++|||||||.+ +.+++++.++ + .+|++|++|++|-.+.+ +.+++++ +.
T Consensus 132 ~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v~yi~r~~ 211 (713)
T TIGR03030 132 TVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVNYITRPR 211 (713)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcCcEEEECCC
Confidence 499999999987 6666665544 1 58999999998765421 1112222 11
Q ss_pred CCCcchhhhhhhhheeccceEEEecCCccccC
Q 045145 59 ISYLDSACRCFAFLISKKKYIFTIDDDCFVAK 90 (270)
Q Consensus 59 lpf~~~arRN~GyL~A~a~yI~~~DDDc~P~~ 90 (270)
-.-.++...|.|+-.|.++||+++|.|+.|.+
T Consensus 212 n~~~KAgnLN~al~~a~gd~Il~lDAD~v~~p 243 (713)
T TIGR03030 212 NVHAKAGNINNALKHTDGELILIFDADHVPTR 243 (713)
T ss_pred CCCCChHHHHHHHHhcCCCEEEEECCCCCcCh
Confidence 11224455789998899999999999999988
No 51
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=97.62 E-value=6.9e-05 Score=66.83 Aligned_cols=66 Identities=12% Similarity=0.102 Sum_probs=50.9
Q ss_pred EEEecccCH-HHHHHhhccc-----C----------CeeEEEEecCCCccceeccCCCCcCcCCCcch------hhhhhh
Q 045145 13 IVIPTIRSL-DFLEMWRPFF-----E----------PYHLIIIQDGDPTEVIRVPDGFDYDCISYLDS------ACRCFA 70 (270)
Q Consensus 13 IVItTin~p-~~L~~~~~~l-----~----------~~~lIVV~D~~tp~~~~l~~~~~~~~lpf~~~------arRN~G 70 (270)
||||.||.. ..|++++.++ + .+|+|||+|+++-.. - -+.+ ...|.|
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d~~-----------~-gk~~~~~~~~~~~~~~ 68 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIKKN-----------R-GKRDSQLWFFNYFCRV 68 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccccc-----------C-cchHHHHHHHHHHHHH
Confidence 689999985 7888877765 3 579999999998711 0 1222 234777
Q ss_pred hheeccceEEEecCCccccC
Q 045145 71 FLISKKKYIFTIDDDCFVAK 90 (270)
Q Consensus 71 yL~A~a~yI~~~DDDc~P~~ 90 (270)
+..|+++||+++|.|+.+.+
T Consensus 69 ~~~a~~e~i~~~DaD~~~~~ 88 (244)
T cd04190 69 LFPDDPEFILLVDADTKFDP 88 (244)
T ss_pred hhcCCCCEEEEECCCCcCCH
Confidence 77889999999999999988
No 52
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=97.56 E-value=8.3e-05 Score=57.32 Aligned_cols=78 Identities=17% Similarity=0.329 Sum_probs=59.9
Q ss_pred EEEecccCHHHHHHhhccc-----CCeeEEEEecCCCccceeccCCCC-----c----CcCCCcchhhhhhhhheeccce
Q 045145 13 IVIPTIRSLDFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGFD-----Y----DCISYLDSACRCFAFLISKKKY 78 (270)
Q Consensus 13 IVItTin~p~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~~-----~----~~lpf~~~arRN~GyL~A~a~y 78 (270)
||||++++++.|+..+.++ ..++++|++|++++++.+...++. . ..-+......+|.|+..+..+|
T Consensus 1 iii~~~~~~~~l~~~l~s~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ 80 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEENQGLAAARNAGLKAARGEY 80 (156)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCccceEEEEEeCCCCccHHHHHHHHHhcCCCeEEEEecCCCChHHHHHHHHHHhcCCE
Confidence 6899999998787777655 278999999999888776443221 1 3334456677888888888999
Q ss_pred EEEecCCccccC
Q 045145 79 IFTIDDDCFVAK 90 (270)
Q Consensus 79 I~~~DDDc~P~~ 90 (270)
++++|+|+.+.+
T Consensus 81 v~~~d~D~~~~~ 92 (156)
T cd00761 81 ILFLDADDLLLP 92 (156)
T ss_pred EEEECCCCccCc
Confidence 999999999877
No 53
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=97.50 E-value=5.2e-05 Score=71.36 Aligned_cols=77 Identities=22% Similarity=0.368 Sum_probs=57.3
Q ss_pred CeeEEEecccCH----HHHHHhhcccC---------CeeEEEEecCCCccceeccCCCC--c-----------CcCCCcc
Q 045145 10 DLDIVIPTIRSL----DFLEMWRPFFE---------PYHLIIIQDGDPTEVIRVPDGFD--Y-----------DCISYLD 63 (270)
Q Consensus 10 ~i~IVItTin~p----~~L~~~~~~l~---------~~~lIVV~D~~tp~~~~l~~~~~--~-----------~~lpf~~ 63 (270)
.++||||+||.+ ..|+.+...|+ .||+|||+||++-.+.++.-++. + ...|- +
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~~a~k~s~K~~~d~irV~~l~~nrgK-G 146 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVEVALKFSRKLGDDNIRVIKLKKNRGK-G 146 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHHHHHHHHHHcCcceEEEeehhccCCC-C
Confidence 589999999977 56777766552 78999999999999887553321 1 22332 3
Q ss_pred hhhhhhhhheeccceEEEecCCccc
Q 045145 64 SACRCFAFLISKKKYIFTIDDDCFV 88 (270)
Q Consensus 64 ~arRN~GyL~A~a~yI~~~DDDc~P 88 (270)
.|.| .|.|.|+++||.|.|.|.--
T Consensus 147 gAvR-~g~l~~rG~~ilfadAdGaT 170 (323)
T KOG2977|consen 147 GAVR-KGMLSSRGQKILFADADGAT 170 (323)
T ss_pred ccee-hhhHhccCceEEEEcCCCCc
Confidence 3444 89999999999999998754
No 54
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=97.36 E-value=0.00025 Score=64.86 Aligned_cols=81 Identities=14% Similarity=0.160 Sum_probs=51.8
Q ss_pred eeEEEecccCH-HHHHHhhcc----c------CCeeEEEEecCCCcccee--------c----cCCCCc------CcCCC
Q 045145 11 LDIVIPTIRSL-DFLEMWRPF----F------EPYHLIIIQDGDPTEVIR--------V----PDGFDY------DCISY 61 (270)
Q Consensus 11 i~IVItTin~p-~~L~~~~~~----l------~~~~lIVV~D~~tp~~~~--------l----~~~~~~------~~lpf 61 (270)
++|+||+||.+ +.|...+.+ + +.+|++|++|+++|+.+. + +....+ .-.++
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~r~~~~g~ 80 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADHFDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRRENTGR 80 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCceEEEEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCCCCc
Confidence 58999999966 544444432 1 478999999999987531 1 112222 33445
Q ss_pred cchhhhhhhhhe-eccceEEEecCCccccCC
Q 045145 62 LDSACRCFAFLI-SKKKYIFTIDDDCFVAKD 91 (270)
Q Consensus 62 ~~~arRN~GyL~-A~a~yI~~~DDDc~P~~~ 91 (270)
|..+..++=... |..+||+.+|.|..|.++
T Consensus 81 Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~ 111 (254)
T cd04191 81 KAGNIADFCRRWGSRYDYMVVLDADSLMSGD 111 (254)
T ss_pred cHHHHHHHHHHhCCCCCEEEEEeCCCCCCHH
Confidence 444444422211 457999999999999983
No 55
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.36 E-value=0.00015 Score=68.76 Aligned_cols=83 Identities=17% Similarity=0.301 Sum_probs=64.5
Q ss_pred CCeeEEEecccCH-HHHHHhhccc-----CCeeEEEEecCCCccceeccCCC------CcCcC-----CCcchhhhhhhh
Q 045145 9 DDLDIVIPTIRSL-DFLEMWRPFF-----EPYHLIIIQDGDPTEVIRVPDGF------DYDCI-----SYLDSACRCFAF 71 (270)
Q Consensus 9 ~~i~IVItTin~p-~~L~~~~~~l-----~~~~lIVV~D~~tp~~~~l~~~~------~~~~l-----pf~~~arRN~Gy 71 (270)
-.++|+||+||.+ +.+++++.++ +.+|++||+|+++.++.+..+.. .+..+ .-.+...-|.|+
T Consensus 54 p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gK~~al~~~l 133 (439)
T COG1215 54 PKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYPEKKNGGKAGALNNGL 133 (439)
T ss_pred CceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEEeccccCccchHHHHHHH
Confidence 5799999999977 4999999877 35799999999999988765432 12111 112467777888
Q ss_pred heeccceEEEecCCccccCC
Q 045145 72 LISKKKYIFTIDDDCFVAKD 91 (270)
Q Consensus 72 L~A~a~yI~~~DDDc~P~~~ 91 (270)
-.|++++++.+|.|..|.+|
T Consensus 134 ~~~~~d~V~~~DaD~~~~~d 153 (439)
T COG1215 134 KRAKGDVVVILDADTVPEPD 153 (439)
T ss_pred hhcCCCEEEEEcCCCCCChh
Confidence 88889999999999999983
No 56
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=97.26 E-value=0.00038 Score=62.80 Aligned_cols=74 Identities=11% Similarity=0.043 Sum_probs=52.3
Q ss_pred cccC-HHHHHHhhcccC--CeeEEEEecCCCcc-ce-eccCCCC-cCcC--C--Ccchhhhhhhhhee---ccceEEEec
Q 045145 17 TIRS-LDFLEMWRPFFE--PYHLIIIQDGDPTE-VI-RVPDGFD-YDCI--S--YLDSACRCFAFLIS---KKKYIFTID 83 (270)
Q Consensus 17 Tin~-p~~L~~~~~~l~--~~~lIVV~D~~tp~-~~-~l~~~~~-~~~l--p--f~~~arRN~GyL~A---~a~yI~~~D 83 (270)
|||. .+.|+.|++++. .+++|||+|+++.+ .. ++.+..+ +..+ + .-.+.++|.|.-+| .++||+++|
T Consensus 2 tyn~~~~~l~~~l~sl~~q~~~iiVVDN~S~~~~~~~~~~~~~~~i~~i~~~~N~G~a~a~N~Gi~~a~~~~~d~i~~lD 81 (281)
T TIGR01556 2 TFNPDLEHLGELITSLPKQVDRIIAVDNSPHSDQPLKNARLRGQKIALIHLGDNQGIAGAQNQGLDASFRRGVQGVLLLD 81 (281)
T ss_pred ccCccHHHHHHHHHHHHhcCCEEEEEECcCCCcHhHHHHhccCCCeEEEECCCCcchHHHHHHHHHHHHHCCCCEEEEEC
Confidence 8896 688999988874 67999999997643 22 2222211 1112 1 12467899998877 479999999
Q ss_pred CCccccC
Q 045145 84 DDCFVAK 90 (270)
Q Consensus 84 DDc~P~~ 90 (270)
+|+.|.+
T Consensus 82 ~D~~~~~ 88 (281)
T TIGR01556 82 QDSRPGN 88 (281)
T ss_pred CCCCCCH
Confidence 9999987
No 57
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=97.06 E-value=0.00099 Score=61.61 Aligned_cols=88 Identities=13% Similarity=0.205 Sum_probs=62.8
Q ss_pred CCeeEEEecccCHHHHHHhhcccC-----CeeEEEEecCCCccceeccCCC---Cc------CcCCCcchhhhhhhhhee
Q 045145 9 DDLDIVIPTIRSLDFLEMWRPFFE-----PYHLIIIQDGDPTEVIRVPDGF---DY------DCISYLDSACRCFAFLIS 74 (270)
Q Consensus 9 ~~i~IVItTin~p~~L~~~~~~l~-----~~~lIVV~D~~tp~~~~l~~~~---~~------~~lpf~~~arRN~GyL~A 74 (270)
-++++||.|||+++.+..|+.++. ..++|+|+++++..+.+..... ++ .-+||... =|.|..+|
T Consensus 3 ~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~s~d~~~~~~~~~~~~~v~~i~~~~NlG~agg--~n~g~~~a 80 (305)
T COG1216 3 PKISIIIVTYNRGEDLVECLASLAAQTYPDDVIVVVDNGSTDGSLEALKARFFPNVRLIENGENLGFAGG--FNRGIKYA 80 (305)
T ss_pred cceEEEEEecCCHHHHHHHHHHHhcCCCCCcEEEEccCCCCCCCHHHHHhhcCCcEEEEEcCCCccchhh--hhHHHHHH
Confidence 468999999999999999998773 4466678999988887554332 22 44666544 35666666
Q ss_pred ccc---eEEEecCCccccCCCCCccchhhhhhhh
Q 045145 75 KKK---YIFTIDDDCFVAKDPSGKEINALAQHLQ 105 (270)
Q Consensus 75 ~a~---yI~~~DDDc~P~~~~~g~~~d~v~~h~~ 105 (270)
.++ |++++++|..+.+ +++++.++
T Consensus 81 ~~~~~~~~l~LN~D~~~~~-------~~l~~ll~ 107 (305)
T COG1216 81 LAKGDDYVLLLNPDTVVEP-------DLLEELLK 107 (305)
T ss_pred hcCCCcEEEEEcCCeeeCh-------hHHHHHHH
Confidence 544 9999999988777 46655554
No 58
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=96.72 E-value=0.0014 Score=65.98 Aligned_cols=83 Identities=13% Similarity=0.179 Sum_probs=61.4
Q ss_pred CCeeEEEecccCHHHHHHhhccc------CCeeEEEEecCCCccceeccCC----CC-c------CcCCCcchhhhhhhh
Q 045145 9 DDLDIVIPTIRSLDFLEMWRPFF------EPYHLIIIQDGDPTEVIRVPDG----FD-Y------DCISYLDSACRCFAF 71 (270)
Q Consensus 9 ~~i~IVItTin~p~~L~~~~~~l------~~~~lIVV~D~~tp~~~~l~~~----~~-~------~~lpf~~~arRN~Gy 71 (270)
..++|+||.||..+.++++++++ ++++++|++|++++++.+..+. ++ + ..-|..+..+-|.|+
T Consensus 66 p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~~~eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv~~~~gp~~Ka~aLN~~l 145 (504)
T PRK14716 66 KRIAIFVPAWREADVIGRMLEHNLATLDYENYRIFVGTYPNDPATLREVDRLAARYPRVHLVIVPHDGPTSKADCLNWIY 145 (504)
T ss_pred CceEEEEeccCchhHHHHHHHHHHHcCCCCCeEEEEEECCCChhHHHHHHHHHHHCCCeEEEEeCCCCCCCHHHHHHHHH
Confidence 45899999999987777777642 4789999999999887654432 21 1 223455777888887
Q ss_pred hee------cc---ceEEEecCCccccCC
Q 045145 72 LIS------KK---KYIFTIDDDCFVAKD 91 (270)
Q Consensus 72 L~A------~a---~yI~~~DDDc~P~~~ 91 (270)
-.+ .+ +||+++|.|+.+.++
T Consensus 146 ~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd 174 (504)
T PRK14716 146 QAIFAFERERGIRFAIIVLHDAEDVIHPL 174 (504)
T ss_pred HHHHHhhhhcCCCcCEEEEEcCCCCcCcc
Confidence 543 23 999999999999984
No 59
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=96.18 E-value=0.0014 Score=59.04 Aligned_cols=82 Identities=15% Similarity=0.249 Sum_probs=50.9
Q ss_pred CCeeEEEecccCHHHHH---Hhhc-cc----CCeeEEEEecCCCccceeccCCCC-------cCcCCCcc----hhhhhh
Q 045145 9 DDLDIVIPTIRSLDFLE---MWRP-FF----EPYHLIIIQDGDPTEVIRVPDGFD-------YDCISYLD----SACRCF 69 (270)
Q Consensus 9 ~~i~IVItTin~p~~L~---~~~~-~l----~~~~lIVV~D~~tp~~~~l~~~~~-------~~~lpf~~----~arRN~ 69 (270)
.+.+|++||||..+-|. ++.. .+ ..||+|||||+++--+.+..+.+. +-.+|-.+ ..+=-.
T Consensus 3 ~kYsvilPtYnEk~Nlpi~~~li~~~~~e~~~~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l~pR~~klGLgtAy~h 82 (238)
T KOG2978|consen 3 IKYSVILPTYNEKENLPIITRLIAKYMSEEGKKYEIIIVDDASPDGTQEVAKALQKIYGEDNILLKPRTKKLGLGTAYIH 82 (238)
T ss_pred cceeEEeccccCCCCCeeeHHHHHhhhhhhcCceEEEEEeCCCCCccHHHHHHHHHHhCCCcEEEEeccCcccchHHHHh
Confidence 47899999999553222 2111 12 389999999999776665443311 11122221 122233
Q ss_pred hhheeccceEEEecCCccccC
Q 045145 70 AFLISKKKYIFTIDDDCFVAK 90 (270)
Q Consensus 70 GyL~A~a~yI~~~DDDc~P~~ 90 (270)
|+-.|.++||+.+|.|-.-++
T Consensus 83 gl~~a~g~fiviMDaDlsHhP 103 (238)
T KOG2978|consen 83 GLKHATGDFIVIMDADLSHHP 103 (238)
T ss_pred hhhhccCCeEEEEeCccCCCc
Confidence 555678999999999988666
No 60
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=96.09 E-value=0.013 Score=61.26 Aligned_cols=83 Identities=11% Similarity=0.168 Sum_probs=55.9
Q ss_pred CCCeeEEEecccCH-----HHHHHhhccc------CCeeEEEEecCCCccceecc--------CCC----Cc---CcCCC
Q 045145 8 KDDLDIVIPTIRSL-----DFLEMWRPFF------EPYHLIIIQDGDPTEVIRVP--------DGF----DY---DCISY 61 (270)
Q Consensus 8 ~~~i~IVItTin~p-----~~L~~~~~~l------~~~~lIVV~D~~tp~~~~l~--------~~~----~~---~~lpf 61 (270)
...++||||+||.. +.|+.+++++ +++|++|++|+++|+.+... +.+ .+ ....=
T Consensus 123 ~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R~~n 202 (691)
T PRK05454 123 EARTAILMPIYNEDPARVFAGLRAMYESLAATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRRRRN 202 (691)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEECCcC
Confidence 44699999999965 3577766644 36899999999999976421 111 11 11111
Q ss_pred cchhhhhhhhhee----ccceEEEecCCccccC
Q 045145 62 LDSACRCFAFLIS----KKKYIFTIDDDCFVAK 90 (270)
Q Consensus 62 ~~~arRN~GyL~A----~a~yI~~~DDDc~P~~ 90 (270)
.+..+-|++.... ..||++.+|-|..+.+
T Consensus 203 ~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~ 235 (691)
T PRK05454 203 VGRKAGNIADFCRRWGGAYDYMVVLDADSLMSG 235 (691)
T ss_pred CCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCH
Confidence 1335557775543 3499999999999988
No 61
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=95.06 E-value=0.021 Score=52.22 Aligned_cols=99 Identities=16% Similarity=0.235 Sum_probs=65.3
Q ss_pred eeEEEecccCH---HHHHHhhccc---CCeeEEEEecCC--CccceeccCCCC--cCcC-----------CCcchhhhhh
Q 045145 11 LDIVIPTIRSL---DFLEMWRPFF---EPYHLIIIQDGD--PTEVIRVPDGFD--YDCI-----------SYLDSACRCF 69 (270)
Q Consensus 11 i~IVItTin~p---~~L~~~~~~l---~~~~lIVV~D~~--tp~~~~l~~~~~--~~~l-----------pf~~~arRN~ 69 (270)
|-+|-|||.++ ..|-++...| ++.+-|||.|+. ||+..+++.+.+ |.++ .-+....||.
T Consensus 3 i~vVTPTy~R~~Q~~~LtRLa~TL~lVp~l~WIVVEd~~~~t~~va~lL~~sgl~y~HL~~~~~~~~~~~~~rg~~qRn~ 82 (223)
T cd00218 3 IYVVTPTYARPVQKAELTRLAHTLRLVPPLHWIVVEDSEEKTPLVAELLRRSGLMYTHLNAKTPSDPTWLKPRGVEQRNL 82 (223)
T ss_pred EEEECCCCccchhhHHHHHHHHHHhcCCceEEEEEeCCCCCCHHHHHHHHHcCCceEEeccCCCCCcccCCcccHHHHHH
Confidence 45778899999 4666666655 699999999987 555666665433 3222 2235567887
Q ss_pred hhheec-------cceEEEecCCccccCCCCCccchhhhhhhhccccCCCcccCCc
Q 045145 70 AFLISK-------KKYIFTIDDDCFVAKDPSGKEINALAQHLQNLLTDEADFVRGY 118 (270)
Q Consensus 70 GyL~A~-------a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~nl~~~~~~wpRG~ 118 (270)
|.-+=+ .-.+||.||||.= + +++|++ +++.. .-.+||=|+
T Consensus 83 AL~~ir~~~~~~~~GVVyFADDdN~Y-s------l~lF~e-mR~i~-~vg~WPVgl 129 (223)
T cd00218 83 ALRWIREHLSAKLDGVVYFADDDNTY-D------LELFEE-MRKIK-RVGVWPVGL 129 (223)
T ss_pred HHHHHHhccccCcceEEEEccCCCcc-c------HHHHHH-HhccC-eeeEEEeee
Confidence 765332 4689999999963 3 356654 54443 345888887
No 62
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]
Probab=94.38 E-value=0.059 Score=51.58 Aligned_cols=101 Identities=19% Similarity=0.271 Sum_probs=67.4
Q ss_pred CCCeeEEEecccCH---HHHHHhhccc---CCeeEEEEecCC--CccceeccCC--CCc------CcCCCc---chhhhh
Q 045145 8 KDDLDIVIPTIRSL---DFLEMWRPFF---EPYHLIIIQDGD--PTEVIRVPDG--FDY------DCISYL---DSACRC 68 (270)
Q Consensus 8 ~~~i~IVItTin~p---~~L~~~~~~l---~~~~lIVV~D~~--tp~~~~l~~~--~~~------~~lpf~---~~arRN 68 (270)
..-|-||-|||+++ ..|-++...| ++.+.|||.|+. +|+.-.+++. +.| ..-+|+ +--.||
T Consensus 86 ~~~iivVTPTY~R~~q~~~LtRlanTL~~V~nLhWIVVEd~~~~~p~v~~~L~rtgl~ythl~~~t~~~~~~~rg~~qRn 165 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRPVQAAELTRLANTLRLVPNLHWIVVEDGEGTTPEVSGILRRTGLPYTHLVHKTPMGYKARRGWEQRN 165 (330)
T ss_pred CccEEEEcccccchhHHHHHHHHHHHHhhcCCeeEEEEecCCCCCHHHHHHHHHcCCceEEEeccCCCCCccccchhHHH
Confidence 34467888999999 4566665555 589999999984 6666666643 444 222232 445688
Q ss_pred hhhheec---------cceEEEecCCccccCCCCCccchhhhhhhhccccCCCcccCC
Q 045145 69 FAFLISK---------KKYIFTIDDDCFVAKDPSGKEINALAQHLQNLLTDEADFVRG 117 (270)
Q Consensus 69 ~GyL~A~---------a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~nl~~~~~~wpRG 117 (270)
.|..+-+ --.+||.||||.= .++.+++ ++|.. .-.+||=|
T Consensus 166 ~aL~~ir~~~~~~~~~~GVVyFADDdN~Y-------dleLF~e-iR~v~-~~gvWpVg 214 (330)
T KOG1476|consen 166 MALRWIRSRILRHHKLEGVVYFADDDNTY-------DLELFEE-IRNVK-KFGVWPVG 214 (330)
T ss_pred HHHHHHHHhcccccccceEEEEccCCcch-------hHHHHHH-Hhccc-eeeeEeee
Confidence 8766443 3689999999984 2456666 66654 34589988
No 63
>PLN02458 transferase, transferring glycosyl groups
Probab=93.78 E-value=0.057 Score=52.03 Aligned_cols=99 Identities=11% Similarity=0.120 Sum_probs=62.7
Q ss_pred eeEEEeccc-CH---HHHHHhhccc---C-CeeEEEEecCC-CccceeccCC--CCcCcCCC---------cchhhhhhh
Q 045145 11 LDIVIPTIR-SL---DFLEMWRPFF---E-PYHLIIIQDGD-PTEVIRVPDG--FDYDCISY---------LDSACRCFA 70 (270)
Q Consensus 11 i~IVItTin-~p---~~L~~~~~~l---~-~~~lIVV~D~~-tp~~~~l~~~--~~~~~lpf---------~~~arRN~G 70 (270)
|-||-|||. ++ ..|-++...| + +.+.|||.|+. ++++-+++.+ +.|.++.+ +....||.|
T Consensus 114 IivVTPTY~rR~~Q~a~LTRLahTL~lVp~pL~WIVVEd~~~t~~va~lLrrsGl~y~HL~~k~~~~~~~~r~~~QRN~A 193 (346)
T PLN02458 114 VIIVTPISTKDRYQGVLLRRLANTLRLVPPPLLWIVVEGQSDSEEVSEMLRKTGIMYRHLVFKENFTDPEAELDHQRNLA 193 (346)
T ss_pred EEEECCCCCCcchhHHHHHHHHHHHhcCCCCceEEEEeCCCCCHHHHHHHHHcCCceEEeccCCCCCCccchhHHHHHHH
Confidence 566778897 67 4677766655 4 79999999987 4554555544 33322222 123458888
Q ss_pred hheec----cceEEEecCCccccCCCCCccchhhhhhhhccccCCCcccCCc
Q 045145 71 FLISK----KKYIFTIDDDCFVAKDPSGKEINALAQHLQNLLTDEADFVRGY 118 (270)
Q Consensus 71 yL~A~----a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~nl~~~~~~wpRG~ 118 (270)
.-+=. .-.+||.||||.= .++++++ +++.. .-.+||=|+
T Consensus 194 L~~IR~h~l~GVVyFADDdNtY-------sl~LFeE-mR~ik-~vG~WPVGl 236 (346)
T PLN02458 194 LRHIEHHKLSGIVHFAGLSNVY-------DLDFFDE-IRDIE-VFGTWPMAL 236 (346)
T ss_pred HHHHHhcCcCceEEEccCCCcc-------cHHHHHH-HhcCc-eeeecceEE
Confidence 76443 5789999999983 2356643 43333 245898887
No 64
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=92.39 E-value=0.11 Score=54.63 Aligned_cols=82 Identities=12% Similarity=0.080 Sum_probs=56.0
Q ss_pred CeeEEEecccCHHHHHHhhccc------CCeeEEEEecCCCccceeccCC----CC---c----CcCCCcchhhhhhhhh
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFF------EPYHLIIIQDGDPTEVIRVPDG----FD---Y----DCISYLDSACRCFAFL 72 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l------~~~~lIVV~D~~tp~~~~l~~~----~~---~----~~lpf~~~arRN~GyL 72 (270)
.++|+||.||....+....+.+ ++++++++.|.+++.+.+..+. ++ . ..-|-.+..+-|.|+.
T Consensus 64 ~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~~eI~vi~~~nD~~T~~~~~~l~~~~p~~~~v~~~~~g~~gKa~aLN~~l~ 143 (727)
T PRK11234 64 PLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPATQADVDAVCARFPNVHKVVCARPGPTSKADCLNNVLD 143 (727)
T ss_pred CEEEEEecCcchhhHHHHHHHHHHhCCCCCeEEEEEecCCChhHHHHHHHHHHHCCCcEEEEeCCCCCCCHHHHHHHHHH
Confidence 4899999999886555554432 4789999987777766544332 11 1 1113457888888887
Q ss_pred ee-------c--cceEEEecCCccccCC
Q 045145 73 IS-------K--KKYIFTIDDDCFVAKD 91 (270)
Q Consensus 73 ~A-------~--a~yI~~~DDDc~P~~~ 91 (270)
.+ . .+.++.+|.||.|.++
T Consensus 144 ~~~~~e~~~~~~~~vvvi~DAD~~v~pd 171 (727)
T PRK11234 144 AITQFERSANFAFAGFILHDAEDVISPM 171 (727)
T ss_pred HHHhhhcccCCcccEEEEEcCCCCCChh
Confidence 76 2 2457779999999994
No 65
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=89.51 E-value=0.5 Score=40.21 Aligned_cols=70 Identities=19% Similarity=0.303 Sum_probs=48.8
Q ss_pred CCCeeEEEecccCHHHHHHhhcccC--------CeeEEEEecCCCccceeccCCCCcCcCCCcchhhhhhhhheec----
Q 045145 8 KDDLDIVIPTIRSLDFLEMWRPFFE--------PYHLIIIQDGDPTEVIRVPDGFDYDCISYLDSACRCFAFLISK---- 75 (270)
Q Consensus 8 ~~~i~IVItTin~p~~L~~~~~~l~--------~~~lIVV~D~~tp~~~~l~~~~~~~~lpf~~~arRN~GyL~A~---- 75 (270)
..++.||||--++.+-|..++..+. .|++.||-=. ...+|+.+.-.|+||+.|.
T Consensus 46 ~~kvAiIIPyRdR~~hL~~fl~~l~~~L~rQ~~~y~I~vieQ~--------------~~~~FNRg~L~NvGf~eA~~~~~ 111 (136)
T PF13733_consen 46 RHKVAIIIPYRDREEHLRIFLPHLHPFLQRQQLDYRIFVIEQV--------------DNGPFNRGKLMNVGFLEALKDDD 111 (136)
T ss_dssp S-EEEEEEEESS-HHHHHHHHHHHHHHHHHTT-EEEEEEEEE---------------SSS---HHHHHHHHHHHHHHHS-
T ss_pred ccceEEEEEeCCHHHHHHHHHHHHHHHHhhCcceEEEEEEeec--------------cCCCCchhhhhhHHHHHHhhccC
Confidence 4568999998888876666665442 6677777432 2467999999999999995
Q ss_pred cceEEEecCCccccCC
Q 045145 76 KKYIFTIDDDCFVAKD 91 (270)
Q Consensus 76 a~yI~~~DDDc~P~~~ 91 (270)
.++++|=|-|-+|..+
T Consensus 112 ~dc~ifHDVDllP~~~ 127 (136)
T PF13733_consen 112 FDCFIFHDVDLLPEND 127 (136)
T ss_dssp -SEEEEE-TTEEESBT
T ss_pred CCEEEEecccccccCC
Confidence 5899999999999885
No 66
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=89.11 E-value=0.54 Score=46.06 Aligned_cols=81 Identities=17% Similarity=0.308 Sum_probs=55.5
Q ss_pred CCeeEEEeccc-CHHHHHHhhcccC-CeeEEEEecCCC-ccce-e----ccC--------------C-----------CC
Q 045145 9 DDLDIVIPTIR-SLDFLEMWRPFFE-PYHLIIIQDGDP-TEVI-R----VPD--------------G-----------FD 55 (270)
Q Consensus 9 ~~i~IVItTin-~p~~L~~~~~~l~-~~~lIVV~D~~t-p~~~-~----l~~--------------~-----------~~ 55 (270)
++..||||..+ ++..|+.++.+.+ ++-+|||...+. |.+. + ++. + -+
T Consensus 51 ~~mAIVVP~KdE~l~lleGVL~gIPh~c~iIvVSNS~r~~~d~f~~E~dlv~~f~~~t~r~~i~vHQkDp~la~Af~~aG 130 (393)
T PRK14503 51 GRMAIVVPVKNERLKLLEGVLKGIPHECPIIVVSNSKREPPDRFKLEVDLVRHFYRLTQRPIIIVHQKDPGLAEALKEAG 130 (393)
T ss_pred hCcEEEEEcCCCchhHHhhHhhcCCCCCeEEEEeCCCCCCchHHHHHHHHHHHHHhhhcCceEEEEcCCHHHHHHHHHcC
Confidence 45789999999 5599999999996 888999999875 3332 1 110 0 11
Q ss_pred c-CcCCCcchhhhh-------hhhheec---cceEEEecCCccccC
Q 045145 56 Y-DCISYLDSACRC-------FAFLISK---KKYIFTIDDDCFVAK 90 (270)
Q Consensus 56 ~-~~lpf~~~arRN-------~GyL~A~---a~yI~~~DDDc~P~~ 90 (270)
| ..+. .+...|| +|.|.|+ ++||=|+|.||+..+
T Consensus 131 yp~il~-~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyiPG 175 (393)
T PRK14503 131 YPYILD-ENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYIPG 175 (393)
T ss_pred ChhhhC-CCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCCCc
Confidence 1 2222 2233333 6788776 799999999999876
No 67
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=88.53 E-value=0.6 Score=49.21 Aligned_cols=83 Identities=10% Similarity=0.138 Sum_probs=58.5
Q ss_pred CCeeEEEecccCHHHHHHhhccc------CCeeEEE---EecCCCccceeccC-CCCc-------CcCCCcchhhhhhhh
Q 045145 9 DDLDIVIPTIRSLDFLEMWRPFF------EPYHLII---IQDGDPTEVIRVPD-GFDY-------DCISYLDSACRCFAF 71 (270)
Q Consensus 9 ~~i~IVItTin~p~~L~~~~~~l------~~~~lIV---V~D~~tp~~~~l~~-~~~~-------~~lpf~~~arRN~Gy 71 (270)
..++|+||.||..+.+.++.+++ +.++++| ++|+.|.+..+-.. .++. +.-|-.+..|-|.|+
T Consensus 71 ~~vsIlVPa~nE~~VI~~~v~~ll~~ldYp~~~I~v~~~~nD~~T~~~~~~~~~~~p~~~~v~~~~~gp~gKa~ALN~~l 150 (703)
T PRK15489 71 QPLAIMVPAWKEYDVIAKMIENMLATLDYRRYVIFVGTYPNDAETITEVERMRRRYKRLVRVEVPHDGPTCKADCLNWII 150 (703)
T ss_pred CceEEEEeCCCcHHHHHHHHHHHHhcCCCCCeEEEEEecCCCccHHHHHHHHhccCCcEEEEEcCCCCCCCHHHHHHHHH
Confidence 45899999999998777777753 3789998 57776666543222 2221 334556889999888
Q ss_pred hee-------ccc--eEEEecCCccccCC
Q 045145 72 LIS-------KKK--YIFTIDDDCFVAKD 91 (270)
Q Consensus 72 L~A-------~a~--yI~~~DDDc~P~~~ 91 (270)
..+ ..+ .++..|.|+.|.++
T Consensus 151 ~~~~~~e~~~~~~fa~vvi~DAEd~~~P~ 179 (703)
T PRK15489 151 QAIFRYEAGHGIEFAGVILHDSEDVLHPL 179 (703)
T ss_pred HHHHhhhhhccCccceEEEEcCCCCCChh
Confidence 765 123 38899999999995
No 68
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=88.31 E-value=0.65 Score=45.28 Aligned_cols=81 Identities=19% Similarity=0.311 Sum_probs=55.4
Q ss_pred CCeeEEEeccc-CHHHHHHhhcccC-CeeEEEEecCCC-ccce-e----ccC--------------C-----------CC
Q 045145 9 DDLDIVIPTIR-SLDFLEMWRPFFE-PYHLIIIQDGDP-TEVI-R----VPD--------------G-----------FD 55 (270)
Q Consensus 9 ~~i~IVItTin-~p~~L~~~~~~l~-~~~lIVV~D~~t-p~~~-~----l~~--------------~-----------~~ 55 (270)
++..||||..+ ++..|+.++.+.+ ++-+|||...+. |.+. + ++. + -+
T Consensus 50 ~~maIVVP~KdE~l~lleGVL~gIPh~c~iIvVSNS~r~~~d~f~~E~d~~~~f~~~t~r~~i~vHQkDp~la~Af~~~g 129 (381)
T TIGR02460 50 GKTAIVVPVKNEKLHLLEGVLSGIPHECPIIIVSNSKREPPDRFKMEVDLIRHFSNLTHRKIIIIHQKDPALAEAFKEVG 129 (381)
T ss_pred hCcEEEEEcCCCchhHHhhHhhcCCCCCeEEEEeCCCCCChhHHHHHHHHHHHHHHhhcCceEEEEcCCHHHHHHHHHcC
Confidence 45789999999 5599999999996 888999999875 3332 1 110 0 11
Q ss_pred c-CcCCCcchhhhh-------hhhheec---cceEEEecCCccccC
Q 045145 56 Y-DCISYLDSACRC-------FAFLISK---KKYIFTIDDDCFVAK 90 (270)
Q Consensus 56 ~-~~lpf~~~arRN-------~GyL~A~---a~yI~~~DDDc~P~~ 90 (270)
+ +.+.- +...|| +|.|.|+ ++||=|+|.||+..+
T Consensus 130 y~~il~~-~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyiPG 174 (381)
T TIGR02460 130 YTSILGE-NGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYFPG 174 (381)
T ss_pred chhhhCC-CCceecCcchHHHHHHHHHHHhCCceEeEeecccCCCc
Confidence 1 22222 222333 6778776 799999999999866
No 69
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=88.21 E-value=0.47 Score=46.37 Aligned_cols=81 Identities=19% Similarity=0.303 Sum_probs=47.1
Q ss_pred CCeeEEEeccc-CHHHHHHhhcccC-CeeEEEEecCCC-ccce-e----ccC--------------C-----------CC
Q 045145 9 DDLDIVIPTIR-SLDFLEMWRPFFE-PYHLIIIQDGDP-TEVI-R----VPD--------------G-----------FD 55 (270)
Q Consensus 9 ~~i~IVItTin-~p~~L~~~~~~l~-~~~lIVV~D~~t-p~~~-~----l~~--------------~-----------~~ 55 (270)
++..||||..| ++..|+.++.+.+ ++-+|||...+. |.+. + ++. + -+
T Consensus 50 ~~maIVVP~KnE~l~lleGVL~gIPh~C~IIvVSNS~r~~~d~f~~E~d~l~~f~~~t~r~~~~vHQkDp~lA~Af~~aG 129 (381)
T PF09488_consen 50 SKMAIVVPCKNEKLKLLEGVLSGIPHDCLIIVVSNSSREPVDRFKMEVDLLKHFCRLTRRQIIIVHQKDPGLAEAFKEAG 129 (381)
T ss_dssp TTEEEEEEESS--HHHHHHHHHCS-TTSEEEEEE---CSSSCHHHHHHHHHHHHHHHCT--EEEEETT-HHHHHHHHHTT
T ss_pred hCcEEEEECCCCchhhhhhhhhcCCCCCeEEEEECCCCCCccHHHHHHHHHHHHHHhhcCceEEEecCCHHHHHHHHHcC
Confidence 46789999999 5599999999996 788888888775 2222 1 110 0 11
Q ss_pred c-CcCCCcchhhhh-------hhhheec---cceEEEecCCccccC
Q 045145 56 Y-DCISYLDSACRC-------FAFLISK---KKYIFTIDDDCFVAK 90 (270)
Q Consensus 56 ~-~~lpf~~~arRN-------~GyL~A~---a~yI~~~DDDc~P~~ 90 (270)
+ +.+.-++. .|| +|.|.|+ ++||=|+|.||+..+
T Consensus 130 y~~il~~~g~-VR~GKgEGMiiGillAk~~g~~YVGFvDADNyiPG 174 (381)
T PF09488_consen 130 YPEILDEDGL-VRNGKGEGMIIGILLAKAPGKRYVGFVDADNYIPG 174 (381)
T ss_dssp --TTB-TTSS-B-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS-HH
T ss_pred cHHHhCCCCc-eecCchHHHHHHHHHHHhcCCceEeEeeccCCCcc
Confidence 1 22322222 343 6788776 799999999999766
No 70
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=87.15 E-value=0.54 Score=35.77 Aligned_cols=72 Identities=18% Similarity=0.273 Sum_probs=44.7
Q ss_pred cCHHHHHHhhcccC--Ce-eEEEEecCCCccceeccCCCCc-----CcCCCcchhhhhhhhh------eeccceEEEecC
Q 045145 19 RSLDFLEMWRPFFE--PY-HLIIIQDGDPTEVIRVPDGFDY-----DCISYLDSACRCFAFL------ISKKKYIFTIDD 84 (270)
Q Consensus 19 n~p~~L~~~~~~l~--~~-~lIVV~D~~tp~~~~l~~~~~~-----~~lpf~~~arRN~GyL------~A~a~yI~~~DD 84 (270)
|....|..|+.... ++ +++|++|+++..+.+++.++.- ...|++....+ ..++ +..++|++++|-
T Consensus 2 ne~~~L~~wl~~~~~lG~d~i~i~d~~s~D~t~~~l~~~~~v~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~dWvl~~D~ 80 (97)
T PF13704_consen 2 NEADYLPEWLAHHLALGVDHIYIYDDGSTDGTREILRALPGVGIIRWVDPYRDERRQ-RAWRNALIERAFDADWVLFLDA 80 (97)
T ss_pred ChHHHHHHHHHHHHHcCCCEEEEEECCCCccHHHHHHhCCCcEEEEeCCCccchHHH-HHHHHHHHHhCCCCCEEEEEee
Confidence 44466777766332 23 7999999999998876655332 22344432211 2222 124799999999
Q ss_pred CccccCC
Q 045145 85 DCFVAKD 91 (270)
Q Consensus 85 Dc~P~~~ 91 (270)
|-+....
T Consensus 81 DEfl~~~ 87 (97)
T PF13704_consen 81 DEFLVPP 87 (97)
T ss_pred eEEEecC
Confidence 9987664
No 71
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=86.90 E-value=1.5 Score=40.04 Aligned_cols=69 Identities=16% Similarity=0.301 Sum_probs=54.2
Q ss_pred CCeeEEEecccCHHHHHHhhcccC--------CeeEEEEecCCCccceeccCCCCcCcCCCcchhhhhhhhheec----c
Q 045145 9 DDLDIVIPTIRSLDFLEMWRPFFE--------PYHLIIIQDGDPTEVIRVPDGFDYDCISYLDSACRCFAFLISK----K 76 (270)
Q Consensus 9 ~~i~IVItTin~p~~L~~~~~~l~--------~~~lIVV~D~~tp~~~~l~~~~~~~~lpf~~~arRN~GyL~A~----a 76 (270)
.++.||||-.++.+-|..+++.+. ++.+.|+-=. ...+|+.+...|+||+.|. .
T Consensus 2 ~~~aiivpyr~R~~~l~~~l~~~~~~L~rq~~~~~i~vi~Q~--------------~~~~FNR~~llNvG~~~a~k~~~~ 67 (219)
T cd00899 2 HKVAIIVPFRNRFEHLLIFLPHLHPFLQRQQLDYRIFVIEQV--------------GNFRFNRAKLLNVGFLEALKDGDW 67 (219)
T ss_pred cceEEEEecCCHHHHHHHHHHHHHHHHHhcCCcEEEEEEEec--------------CCccchhhhhhhHHHHHHhhcCCc
Confidence 468999999999877777777553 5677666422 2467999999999999995 3
Q ss_pred ceEEEecCCccccCC
Q 045145 77 KYIFTIDDDCFVAKD 91 (270)
Q Consensus 77 ~yI~~~DDDc~P~~~ 91 (270)
+|++|=|-|=+|..+
T Consensus 68 dc~i~hDVDllP~~~ 82 (219)
T cd00899 68 DCFIFHDVDLLPEND 82 (219)
T ss_pred cEEEEecccccccCc
Confidence 689999999999885
No 72
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=84.52 E-value=0.58 Score=46.70 Aligned_cols=82 Identities=20% Similarity=0.272 Sum_probs=46.4
Q ss_pred CeeEEEecccCHHHHHHhhccc-------CCeeEEEEecCCCccceeccCCCC--c--------CcC---C----Ccchh
Q 045145 10 DLDIVIPTIRSLDFLEMWRPFF-------EPYHLIIIQDGDPTEVIRVPDGFD--Y--------DCI---S----YLDSA 65 (270)
Q Consensus 10 ~i~IVItTin~p~~L~~~~~~l-------~~~~lIVV~D~~tp~~~~l~~~~~--~--------~~l---p----f~~~a 65 (270)
.+-|+|-++|||+.|++|+.+| +.+.+||-+|++.+++.++...+. + ..+ | +.+|-
T Consensus 94 ~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~vi~~y~~~v~~i~~~~~~~i~~~~~~~~~~~y~ 173 (434)
T PF03071_consen 94 VIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEVIKSYGDQVTYIQHPDFSPITIPPKEKKFKGYY 173 (434)
T ss_dssp ---EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHHHHGGGGGSEEEE-S--S-----TT-GGGHHHH
T ss_pred cceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHHHHHhhhhheeeecCCcCCceeCcccccccchH
Confidence 4788899999999999998866 478999999999888776554442 1 111 1 11111
Q ss_pred hhhhhhhee--------ccceEEEecCCccccCC
Q 045145 66 CRCFAFLIS--------KKKYIFTIDDDCFVAKD 91 (270)
Q Consensus 66 rRN~GyL~A--------~a~yI~~~DDDc~P~~~ 91 (270)
+=+.-|-+| ..+.+|.+.||..+.+|
T Consensus 174 ~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPD 207 (434)
T PF03071_consen 174 KIARHYKWALSQVFNKFKYSSVIILEDDLEISPD 207 (434)
T ss_dssp HHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TT
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEecCcccCcc
Confidence 111223223 14779999999999994
No 73
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=80.67 E-value=1.7 Score=43.47 Aligned_cols=81 Identities=11% Similarity=0.090 Sum_probs=53.0
Q ss_pred eeEEEecccCH--HHHHHhhcccC------CeeEEEEecCC-CccceeccCCCCc-CcC----CCcchhhhhhhhheecc
Q 045145 11 LDIVIPTIRSL--DFLEMWRPFFE------PYHLIIIQDGD-PTEVIRVPDGFDY-DCI----SYLDSACRCFAFLISKK 76 (270)
Q Consensus 11 i~IVItTin~p--~~L~~~~~~l~------~~~lIVV~D~~-tp~~~~l~~~~~~-~~l----pf~~~arRN~GyL~A~a 76 (270)
.+||||.-|.. ..|.-+..-|. =.|+|.|||.+ .|++..++.+..- .++ -----.-|+.|--.|.+
T Consensus 126 TsviITfHNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dped~~~L~ri~kvr~LRN~~ReGLirSRvrGAdvA~a 205 (559)
T KOG3738|consen 126 TSVIITFHNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPEDGKLLKRIPKVRVLRNNEREGLIRSRVRGADVAQA 205 (559)
T ss_pred ceEEEEeccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChHHHHHHhhhheeeeecccchhhhhhhhccccccccc
Confidence 67888887755 45555544442 23999999998 6776655443211 111 00022447778888899
Q ss_pred ceEEEecCCccccCC
Q 045145 77 KYIFTIDDDCFVAKD 91 (270)
Q Consensus 77 ~yI~~~DDDc~P~~~ 91 (270)
.|+-|+|-.|....+
T Consensus 206 ~vltFLDSHcEvN~~ 220 (559)
T KOG3738|consen 206 TVLTFLDSHCEVNEG 220 (559)
T ss_pred eEEEEEecceeecch
Confidence 999999999998775
No 74
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.
Probab=78.29 E-value=1.3 Score=40.08 Aligned_cols=83 Identities=17% Similarity=0.222 Sum_probs=44.6
Q ss_pred hcccCCeeEEEEecCCCccc--eeccCC--CCcCc--------------CCCcchhhhhhhhheec-------cceEEEe
Q 045145 28 RPFFEPYHLIIIQDGDPTEV--IRVPDG--FDYDC--------------ISYLDSACRCFAFLISK-------KKYIFTI 82 (270)
Q Consensus 28 ~~~l~~~~lIVV~D~~tp~~--~~l~~~--~~~~~--------------lpf~~~arRN~GyL~A~-------a~yI~~~ 82 (270)
+...++.+-|||.|+..... -+++.+ +.|.+ ..-+....||.|+-+-. .-.+||.
T Consensus 5 L~~V~~l~WIVVEd~~~~~~~v~~lL~~sgl~y~hL~~~~p~~~~~~~~~~~rg~~qRn~AL~~ir~~~~~~~~GVVyFa 84 (207)
T PF03360_consen 5 LRHVPPLHWIVVEDSEETTPLVARLLRRSGLPYTHLNVKTPSNFKDPRWIKPRGVHQRNAALRWIRNNANHRLDGVVYFA 84 (207)
T ss_dssp HTTSSSEEEEEEESSSS--HHHHHHHHHHTSEEEEEE----HHHH-------TSHHHHHHHHHHHHSTTTSSS-EEEEE-
T ss_pred hhcCCceEEEEEeCCCCCCHHHHHHHHHcCCceeEEecCCccccccccccccccHHHHHHHHHHHHhcccCCCCcEEEEC
Confidence 33456889999999886555 334433 22211 12335668898876433 5789999
Q ss_pred cCCccccCCCCCccchhhhhhhhccccCCCcccCCcc
Q 045145 83 DDDCFVAKDPSGKEINALAQHLQNLLTDEADFVRGYP 119 (270)
Q Consensus 83 DDDc~P~~~~~g~~~d~v~~h~~nl~~~~~~wpRG~P 119 (270)
||||.=. +..+++ ++... .-.+||=|+-
T Consensus 85 DDdNtYd-------l~LF~e-mR~~k-~vgvWPVG~v 112 (207)
T PF03360_consen 85 DDDNTYD-------LRLFDE-MRKTK-RVGVWPVGLV 112 (207)
T ss_dssp -TTSEE--------HHHHHH-HCT-S-SEEE--EEEE
T ss_pred CCCCeee-------HHHHHH-HHhhh-cccceeecee
Confidence 9999842 355654 44333 3468998873
No 75
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=77.15 E-value=2.1 Score=45.21 Aligned_cols=82 Identities=17% Similarity=0.351 Sum_probs=55.2
Q ss_pred CCeeEEEeccc-CHHHHHHhhcccC-CeeEEEEecCCC-c-ccee----ccC--------------C-----------CC
Q 045145 9 DDLDIVIPTIR-SLDFLEMWRPFFE-PYHLIIIQDGDP-T-EVIR----VPD--------------G-----------FD 55 (270)
Q Consensus 9 ~~i~IVItTin-~p~~L~~~~~~l~-~~~lIVV~D~~t-p-~~~~----l~~--------------~-----------~~ 55 (270)
++..||||..+ ++..|+.++.+.+ ++-+|||...+. | +-++ ++. + -+
T Consensus 55 ~~~aivvp~k~e~~~~~~gvl~~ip~~c~ii~vsns~r~~~d~~~~e~~~~~~~~~~~~~~~~~vhq~dp~~a~a~~~~g 134 (694)
T PRK14502 55 KKMAIVLPIKDEDLKVFEGVLSGIPHDCLMIVISNSSKQEVDNFKNEKDIVNRFCRITHRQAIVVHQKNPELANAIADAG 134 (694)
T ss_pred hCcEEEEEcCCCchhHHhhHhhcCCCCCeEEEEeCCCCCchHHHHHHHHHHHHHHHhhcCceEEEEcCCHHHHHHHHHcC
Confidence 35789999999 5599999999996 888889998874 2 2221 110 0 11
Q ss_pred c-CcCCCcchhhhh-------hhhheec---cceEEEecCCccccCC
Q 045145 56 Y-DCISYLDSACRC-------FAFLISK---KKYIFTIDDDCFVAKD 91 (270)
Q Consensus 56 ~-~~lpf~~~arRN-------~GyL~A~---a~yI~~~DDDc~P~~~ 91 (270)
| +.++- +...|| +|.|.|+ ++||=|+|.||+..+.
T Consensus 135 ~~~~~~~-~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny~pg~ 180 (694)
T PRK14502 135 YPELLGE-DGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNYIPGA 180 (694)
T ss_pred ChhhhCC-CCceecCcchHHHHHHHHHHhcCCceEeEeeccCCCCch
Confidence 1 22322 222333 6788776 7999999999997653
No 76
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=76.69 E-value=4.3 Score=38.75 Aligned_cols=42 Identities=19% Similarity=0.340 Sum_probs=34.2
Q ss_pred CcCCCcc-hhhhhhhhheec----cceEEEecCCccccCCCCCccchhhhhhhh
Q 045145 57 DCISYLD-SACRCFAFLISK----KKYIFTIDDDCFVAKDPSGKEINALAQHLQ 105 (270)
Q Consensus 57 ~~lpf~~-~arRN~GyL~A~----a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~ 105 (270)
+.-||.+ ..|||.|--+|. .+||.|+|-||.-.. |.+++|++
T Consensus 71 s~~~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~-------dnF~k~l~ 117 (346)
T COG4092 71 SPEPFASETICANNGADYSHEKCESNLVLFLDVDCFGSS-------DNFAKMLS 117 (346)
T ss_pred CCccccchhhhhhccchhhhccccccEEEEEeccccccH-------HHHHHHHH
Confidence 4456666 899999999996 899999999999865 46777764
No 77
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=74.49 E-value=7.2 Score=34.89 Aligned_cols=62 Identities=21% Similarity=0.228 Sum_probs=41.8
Q ss_pred EEecccCHHHHHHhhcccC-----CeeEEEEecCCCccceeccCCCCcCcCCCcchhhhhhhhheeccceEEEecCCccc
Q 045145 14 VIPTIRSLDFLEMWRPFFE-----PYHLIIIQDGDPTEVIRVPDGFDYDCISYLDSACRCFAFLISKKKYIFTIDDDCFV 88 (270)
Q Consensus 14 VItTin~p~~L~~~~~~l~-----~~~lIVV~D~~tp~~~~l~~~~~~~~lpf~~~arRN~GyL~A~a~yI~~~DDDc~P 88 (270)
||+-+|+++.+++|++.++ ..++|-+...... ..-++.=|.|...|+++|++|+.+|...
T Consensus 3 iI~c~n~~~~~~~~~~~i~~~~~~~~~~i~i~~~~~~---------------~s~~~~yN~a~~~a~~~ylvflHqDv~i 67 (217)
T PF13712_consen 3 IIICVNDEELYEECLRSIKRLIGPPGELIEIDNVRNA---------------KSMAAAYNEAMEKAKAKYLVFLHQDVFI 67 (217)
T ss_dssp EEEEES-HHHHHHHHHHHHHTT--TEEEEEEE-SSS----------------S-TTTHHHHHGGG--SSEEEEEETTEE-
T ss_pred EEEEECCHHHHHHHHHHHHhhCCCCceEEEEeccCCC---------------cCHHHHHHHHHHhCCCCEEEEEeCCeEE
Confidence 5677899988888888663 6677666553211 2445667888888999999999999998
Q ss_pred cC
Q 045145 89 AK 90 (270)
Q Consensus 89 ~~ 90 (270)
..
T Consensus 68 ~~ 69 (217)
T PF13712_consen 68 IN 69 (217)
T ss_dssp SS
T ss_pred cc
Confidence 76
No 78
>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]
Probab=73.99 E-value=7.7 Score=37.94 Aligned_cols=73 Identities=16% Similarity=0.218 Sum_probs=56.7
Q ss_pred CCCCCCeeEEEecccCHHHHHHhhcccC--------CeeEEEEecCCCccceeccCCCCcCcCCCcchhhhhhhhheecc
Q 045145 5 PPLKDDLDIVIPTIRSLDFLEMWRPFFE--------PYHLIIIQDGDPTEVIRVPDGFDYDCISYLDSACRCFAFLISKK 76 (270)
Q Consensus 5 ~~~~~~i~IVItTin~p~~L~~~~~~l~--------~~~lIVV~D~~tp~~~~l~~~~~~~~lpf~~~arRN~GyL~A~a 76 (270)
+.-..++.||||-=++-+-|..++..|. +|.+.||-- . ..-||+-+.--|+||+.|-+
T Consensus 147 C~ar~kvAIIIPfR~Re~HL~~~l~~LhP~LqrQrL~y~iyVieQ------------~--g~~~FNRakL~NVGf~eAlk 212 (372)
T KOG3916|consen 147 CQARHKVAIIIPFRNREEHLRYLLHHLHPFLQRQRLDYRIYVIEQ------------A--GNKPFNRAKLLNVGFLEALK 212 (372)
T ss_pred CCccceeEEEeecccHHHHHHHHHHHhhHHHHhhhhceeEEEEEe------------c--CCCcccHHHhhhhHHHHHHH
Confidence 3344579999998888887777776553 677777743 2 35789999999999999964
Q ss_pred ----ceEEEecCCccccCC
Q 045145 77 ----KYIFTIDDDCFVAKD 91 (270)
Q Consensus 77 ----~yI~~~DDDc~P~~~ 91 (270)
+..||=|-|-+|..|
T Consensus 213 d~~wdCfIFHDVDllPenD 231 (372)
T KOG3916|consen 213 DYGWDCFIFHDVDLLPEND 231 (372)
T ss_pred hcCCCEEEEecccccccCC
Confidence 778899999999886
No 79
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=62.70 E-value=11 Score=34.50 Aligned_cols=86 Identities=21% Similarity=0.292 Sum_probs=47.7
Q ss_pred CCeeEEEEecCCCcccee-----ccCCCC-c--CcCCCc-c-hhhhhh--hhheeccceEEEe--cCCccccCCCCCccc
Q 045145 32 EPYHLIIIQDGDPTEVIR-----VPDGFD-Y--DCISYL-D-SACRCF--AFLISKKKYIFTI--DDDCFVAKDPSGKEI 97 (270)
Q Consensus 32 ~~~~lIVV~D~~tp~~~~-----l~~~~~-~--~~lpf~-~-~arRN~--GyL~A~a~yI~~~--DDDc~P~~~~~g~~~ 97 (270)
++|++||+-|..+|+.+. +.+.++ + ...|-. + .++|.+ +.....+++++.+ |||=....
T Consensus 57 ~dF~~lv~~~~~~P~~~~~rL~~l~~~~p~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~RLDdDDAl~~------- 129 (234)
T PF11316_consen 57 QDFTWLVLFDDDLPEPYRERLRDLLADYPQFRIVFRPPGPHRDAMRRAINAARRDGADPVLQFRLDDDDALHR------- 129 (234)
T ss_pred CCeEEEEEECCCCCHHHHHHHHHHhccCCCcEEEecCCchHHHHHHHHHhhhccCCCCEEEEEEECCcchhhH-------
Confidence 499999999999999863 334443 1 111111 1 122222 2223346777766 77666555
Q ss_pred hhhhhh---hhc---ccc-C---CCcccCCccccccC
Q 045145 98 NALAQH---LQN---LLT-D---EADFVRGYPFSLRE 124 (270)
Q Consensus 98 d~v~~h---~~n---l~~-~---~~~wpRG~Pl~~~~ 124 (270)
||+++= ... |.. + .-.|+|||=++..+
T Consensus 130 dFV~rlr~~a~~~~~l~~~~~~~ai~f~~Gy~~~~~~ 166 (234)
T PF11316_consen 130 DFVARLRRAAADLRPLQPKQRPVAIDFNRGYVLRLSD 166 (234)
T ss_pred HHHHHHHHHHHhccccccCCCcEEEEeCCceEEEecC
Confidence 576532 211 221 1 24899999885543
No 80
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=58.26 E-value=6.9 Score=33.76 Aligned_cols=48 Identities=19% Similarity=0.384 Sum_probs=30.2
Q ss_pred cCCCceeeccc-hhhhhhhhhccchhhheecCCCCcccchhhHHHHHHHHHH
Q 045145 164 IPKGSLFPMCA-MNLAFNRELIGPAIYFALTGNGQPIGRYDDMWAGWRVKVV 214 (270)
Q Consensus 164 l~~gt~~P~ns-qNt~f~r~a~gpa~~~~~~~~~~~~~R~~DIwrgy~~qri 214 (270)
.|.+.|-|+|+ .--++.++++ .-++.... -...+..+|++=|.|++++
T Consensus 139 y~~~~yP~y~~G~~yvls~~~v-~~i~~~~~--~~~~~~~eDv~iGi~~~~~ 187 (195)
T PF01762_consen 139 YPDDYYPPYCSGGGYVLSSDVV-KRIYKASS--HTPFFPLEDVFIGILAEKL 187 (195)
T ss_pred cccccCCCcCCCCeEEecHHHH-HHHHHHhh--cCCCCCchHHHHHHHHHHC
Confidence 45566666665 4445566666 55442221 1256889999999999864
No 81
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=55.59 E-value=11 Score=34.84 Aligned_cols=60 Identities=23% Similarity=0.280 Sum_probs=41.9
Q ss_pred CeeEEEEecCC-CccceeccC------CCCc------CcCC--Cc--chhhhhhhhheeccceEEEecCCccccCCC
Q 045145 33 PYHLIIIQDGD-PTEVIRVPD------GFDY------DCIS--YL--DSACRCFAFLISKKKYIFTIDDDCFVAKDP 92 (270)
Q Consensus 33 ~~~lIVV~D~~-tp~~~~l~~------~~~~------~~lp--f~--~~arRN~GyL~A~a~yI~~~DDDc~P~~~~ 92 (270)
+.||+.-++.. +++..+.+. .+|. +..+ +. ++..|-++.+++..+=++++|-|++|..++
T Consensus 31 PIEI~~~~~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~~~~~~~~~~~~K~lA~l~ssFeevllLDaD~vpl~~p 107 (271)
T PF11051_consen 31 PIEIIYPGDDDLSKEFCEKLLPDQDVWFVDASCVIDPDYLGKSFSKKGFQNKWLALLFSSFEEVLLLDADNVPLVDP 107 (271)
T ss_pred CEEEEeCCccccCHHHHHHHhhhhhhheecceEEeeccccccccccCCchhhhhhhhhCCcceEEEEcCCcccccCH
Confidence 77999997333 444443332 2333 1121 23 888999999999998899999999999874
No 82
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=42.45 E-value=15 Score=37.04 Aligned_cols=81 Identities=14% Similarity=0.098 Sum_probs=51.9
Q ss_pred eeEEEecccCH-HHHHHhhcc-cC------CeeEEEEecCCCccceec-cCC----CCcCcCCCc------chhhhhhhh
Q 045145 11 LDIVIPTIRSL-DFLEMWRPF-FE------PYHLIIIQDGDPTEVIRV-PDG----FDYDCISYL------DSACRCFAF 71 (270)
Q Consensus 11 i~IVItTin~p-~~L~~~~~~-l~------~~~lIVV~D~~tp~~~~l-~~~----~~~~~lpf~------~~arRN~Gy 71 (270)
.||||..-|.. ..|-+-..+ +. =-|+|.|||-+..+..+- ++. |+=-..-|+ -..+|++|-
T Consensus 157 ~SVviVFHNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKehLkekLDeYv~~fnGlVkV~Rne~REGLI~aRSiGA 236 (603)
T KOG3737|consen 157 SSVVIVFHNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKEHLKEKLDEYVKLFNGLVKVFRNERREGLIQARSIGA 236 (603)
T ss_pred ceEEEEEecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCccHHHHHHHHHHHHHhcCEEEEEecchhhhhhhhhccch
Confidence 57888888866 434333222 21 239999999998887531 111 100011122 346788999
Q ss_pred heeccceEEEecCCccccCC
Q 045145 72 LISKKKYIFTIDDDCFVAKD 91 (270)
Q Consensus 72 L~A~a~yI~~~DDDc~P~~~ 91 (270)
.-|.++.|+|+|..|.+..+
T Consensus 237 ~~atGeV~ifLDAHCEVntN 256 (603)
T KOG3737|consen 237 QKATGEVLIFLDAHCEVNTN 256 (603)
T ss_pred hhccccEEEEEecceeeecc
Confidence 88999999999999998775
No 83
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=29.03 E-value=41 Score=28.86 Aligned_cols=127 Identities=19% Similarity=0.193 Sum_probs=64.3
Q ss_pred hhhe-eccceEEEecCCccccCCCCCccchhhhhhhhccccCCCcccCCccccccCCccceeeeccccCCCCCCcccccc
Q 045145 70 AFLI-SKKKYIFTIDDDCFVAKDPSGKEINALAQHLQNLLTDEADFVRGYPFSLREGVPTAVSHGRWLNIPDYDAPTQLV 148 (270)
Q Consensus 70 GyL~-A~a~yI~~~DDDc~P~~~~~g~~~d~v~~h~~nl~~~~~~wpRG~Pl~~~~g~~~~iqqGL~~~~PDvDAi~rl~ 148 (270)
||-. |+.+||++.|+|..+.+ +.+++-+..|...+...+-|+|+-... .|+|... .+.+.
T Consensus 25 ~~~~~a~~d~~~~~DsDi~v~p-------~~L~~lv~~l~~p~vglVt~~~~~~~~-------~~~~~~l---~~~~~-- 85 (175)
T PF13506_consen 25 GLEAGAKYDYLVISDSDIRVPP-------DYLRELVAPLADPGVGLVTGLPRGVPA-------RGFWSRL---EAAFF-- 85 (175)
T ss_pred HHHhhCCCCEEEEECCCeeECH-------HHHHHHHHHHhCCCCcEEEecccccCC-------cCHHHHH---HHHHH--
Confidence 4555 78899999999999988 466555544543233333444432211 1222211 01110
Q ss_pred CCCcccccccCceeecCCCceeeccchhhhhhhhhccchhhheecCCCCcccchhhHHHHHHHHHHHHHcCCceEEecCe
Q 045145 149 KPRERNSRYVDAVMTIPKGSLFPMCAMNLAFNRELIGPAIYFALTGNGQPIGRYDDMWAGWRVKVVCDHLNLGVKTGLPY 228 (270)
Q Consensus 149 ~~~~~~~~f~~~~v~l~~gt~~P~nsqNt~f~r~a~gpa~~~~~~~~~~~~~R~~DIwrgy~~qri~~~~G~~v~f~~P~ 228 (270)
.|...++..-.| .-..+++-.+|.|+++ =.+ .+.-. -.-.-.+| |..-+.+++.|+.|.+.+-.
T Consensus 86 -------~~~~~~~~a~~~-~~~~~G~~m~~rr~~L-~~~-GG~~~--l~~~ladD----~~l~~~~~~~G~~v~~~~~~ 149 (175)
T PF13506_consen 86 -------NFLPGVLQALGG-APFAWGGSMAFRREAL-EEI-GGFEA--LADYLADD----YALGRRLRARGYRVVLSPYP 149 (175)
T ss_pred -------hHHHHHHHHhcC-CCceecceeeeEHHHH-HHc-ccHHH--HhhhhhHH----HHHHHHHHHCCCeEEEcchh
Confidence 011111101112 3346777788888888 222 11100 00112333 56678889999999998744
Q ss_pred EEe
Q 045145 229 VWH 231 (270)
Q Consensus 229 v~~ 231 (270)
+.+
T Consensus 150 v~~ 152 (175)
T PF13506_consen 150 VVQ 152 (175)
T ss_pred eee
Confidence 443
No 84
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=27.32 E-value=97 Score=32.57 Aligned_cols=83 Identities=11% Similarity=0.238 Sum_probs=48.6
Q ss_pred CCCeeEEEeccc-CH-HHHH---Hhhccc------CCeeEEEEecCCCccceeccCC---------CCcCcCCCcchhhh
Q 045145 8 KDDLDIVIPTIR-SL-DFLE---MWRPFF------EPYHLIIIQDGDPTEVIRVPDG---------FDYDCISYLDSACR 67 (270)
Q Consensus 8 ~~~i~IVItTin-~p-~~L~---~~~~~l------~~~~lIVV~D~~tp~~~~l~~~---------~~~~~lpf~~~arR 67 (270)
.....|++|+|| ++ ..+. ...+++ +.|.+.|..|+..|+-. +.|+ .+-..--|--..||
T Consensus 143 ~hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg~~~~FD~FVLSDs~dpdia-lAEq~a~~~l~~e~~g~~~ifYRrRr~ 221 (736)
T COG2943 143 LHRTAILMPIYNEDVNRVFAGLRATYESLAATGHAEHFDFFVLSDSRDPDIA-LAEQKAWAELCRELGGEGNIFYRRRRR 221 (736)
T ss_pred ccceeEEeeccccCHHHHHHHHHHHHHHHHhhCCcccceEEEEcCCCCchhh-hhHHHHHHHHHHHhCCCCceeeehHhh
Confidence 344899999999 55 2333 333333 58999999999998853 2221 00011223333444
Q ss_pred hhhhhee-----------ccceEEEecCCccccCC
Q 045145 68 CFAFLIS-----------KKKYIFTIDDDCFVAKD 91 (270)
Q Consensus 68 N~GyL~A-----------~a~yI~~~DDDc~P~~~ 91 (270)
|.|=-.- .-+|.+.+|.|..-.++
T Consensus 222 n~~RKaGNIaDfcrRwG~~Y~~MlVLDADSvMtgd 256 (736)
T COG2943 222 NVKRKAGNIADFCRRWGSAYSYMLVLDADSVMTGD 256 (736)
T ss_pred hhcccccCHHHHHHHhCcccceEEEeecccccCch
Confidence 5443211 13888899998887663
No 85
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=26.03 E-value=43 Score=34.93 Aligned_cols=82 Identities=11% Similarity=0.049 Sum_probs=53.5
Q ss_pred CeeEEEecccCH-HHHHHhhccc----C---CeeEEEEecCCCccceecc-CC----CCc---CcCCCc--chhhhhhhh
Q 045145 10 DLDIVIPTIRSL-DFLEMWRPFF----E---PYHLIIIQDGDPTEVIRVP-DG----FDY---DCISYL--DSACRCFAF 71 (270)
Q Consensus 10 ~i~IVItTin~p-~~L~~~~~~l----~---~~~lIVV~D~~tp~~~~l~-~~----~~~---~~lpf~--~~arRN~Gy 71 (270)
..+|||..+|.. ..|-+-..+. + --|+|.|+|.+.-+.+..+ +. +.. -...-+ -..+|.+|.
T Consensus 143 ~~Svii~f~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~~~Ld~y~k~~~~v~i~r~~~R~GLIrARl~GA 222 (578)
T KOG3736|consen 143 TTSVIIIFHNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHLKDKLEEYVKRFSKVRILRTKKREGLIRARLLGA 222 (578)
T ss_pred CCceEEEEecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhhhhhhHHHHhhhcceeEEeecchhhhHHHHhhhh
Confidence 368888888855 4443322222 1 2299999999987775321 11 100 111112 457889999
Q ss_pred heeccceEEEecCCccccCC
Q 045145 72 LISKKKYIFTIDDDCFVAKD 91 (270)
Q Consensus 72 L~A~a~yI~~~DDDc~P~~~ 91 (270)
..|.++.++|+|.-|.....
T Consensus 223 ~~A~geVL~FLDsHcE~n~g 242 (578)
T KOG3736|consen 223 SMATGEVLTFLDSHCEVNVG 242 (578)
T ss_pred hhhhchheeeeecceeEecC
Confidence 99999999999999998775
No 86
>KOG4074 consensus Leucine zipper nuclear factor [Function unknown]
Probab=21.90 E-value=44 Score=32.46 Aligned_cols=43 Identities=26% Similarity=0.385 Sum_probs=30.1
Q ss_pred hhHHHH-HHHHHH-HHHcCCceEEecCeEEecCCCCcccchHhhhccccc----cccHHHH
Q 045145 203 DDMWAG-WRVKVV-CDHLNLGVKTGLPYVWHNKASNPFVNLKKEYNGLFW----QEEIIPF 257 (270)
Q Consensus 203 ~DIwrg-y~~qri-~~~~G~~v~f~~P~v~~~r~h~~l~Dl~~E~~~~~~----~~~i~~f 257 (270)
+|+||+ |.|+++ |+++-- .||++++++..+-+..+. +.+|.+|
T Consensus 214 cdVWrsKFLAssVm~dELt~------------~~~~l~q~l~~~~e~~kq~~vaT~~i~e~ 262 (383)
T KOG4074|consen 214 CDVWRSKFLASSVMCDELTS------------KNEYLLQTLVGIQEAVKQKNVATDEISEF 262 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHh------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999 667776 677643 279999999887766543 4445544
Done!