Query 045149
Match_columns 118
No_of_seqs 102 out of 1105
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 10:19:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045149.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045149hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03185 GST_C_Tau GST_C family 99.8 7.1E-18 1.5E-22 107.9 11.9 105 5-109 20-125 (126)
2 cd03184 GST_C_Omega GST_C fami 99.7 1.3E-17 2.8E-22 107.1 8.7 105 4-109 17-123 (124)
3 cd03201 GST_C_DHAR GST_C famil 99.7 3.2E-17 6.9E-22 105.2 10.3 103 4-108 15-119 (121)
4 cd03190 GST_C_ECM4_like GST_C 99.7 2.9E-17 6.3E-22 107.9 9.4 109 4-112 20-131 (142)
5 KOG0406 Glutathione S-transfer 99.7 1.1E-16 2.3E-21 112.1 12.2 103 13-115 123-227 (231)
6 cd03198 GST_C_CLIC GST_C famil 99.7 4.5E-16 9.7E-21 101.5 10.6 103 4-108 12-133 (134)
7 cd03203 GST_C_Lambda GST_C fam 99.6 1.4E-15 3.1E-20 97.3 8.0 82 23-107 34-119 (120)
8 cd03186 GST_C_SspA GST_N famil 99.6 3.9E-15 8.4E-20 92.9 9.4 86 5-96 20-106 (107)
9 TIGR00862 O-ClC intracellular 99.6 8.6E-15 1.9E-19 103.6 11.8 94 15-110 119-231 (236)
10 cd03196 GST_C_5 GST_C family, 99.6 8.5E-15 1.8E-19 93.0 8.7 79 15-97 37-115 (115)
11 PF00043 GST_C: Glutathione S- 99.6 8.1E-15 1.7E-19 89.4 7.1 71 16-91 25-95 (95)
12 cd03207 GST_C_8 GST_C family, 99.6 3.2E-14 7E-19 88.1 8.5 77 13-97 24-100 (103)
13 cd03188 GST_C_Beta GST_C famil 99.6 1.8E-14 4E-19 90.2 7.5 74 17-97 41-114 (114)
14 cd03209 GST_C_Mu GST_C family, 99.5 4.8E-14 1E-18 90.0 8.6 78 15-98 31-108 (121)
15 cd03187 GST_C_Phi GST_C family 99.5 5.1E-14 1.1E-18 88.8 7.8 78 14-96 40-117 (118)
16 cd03183 GST_C_Theta GST_C fami 99.5 1.5E-13 3.3E-18 87.9 8.2 78 14-97 40-120 (126)
17 cd03177 GST_C_Delta_Epsilon GS 99.5 1.9E-13 4.2E-18 86.7 8.3 78 14-97 33-110 (118)
18 PRK09481 sspA stringent starva 99.5 2.6E-13 5.7E-18 94.1 9.3 84 14-102 122-205 (211)
19 cd03210 GST_C_Pi GST_C family, 99.5 2.1E-13 4.5E-18 87.8 8.0 78 15-98 31-111 (126)
20 cd03178 GST_C_Ure2p_like GST_C 99.5 8.6E-14 1.9E-18 87.3 6.1 78 14-97 35-112 (113)
21 cd03191 GST_C_Zeta GST_C famil 99.5 3.2E-13 7E-18 85.9 8.5 73 20-99 45-119 (121)
22 cd03180 GST_C_2 GST_C family, 99.5 3.5E-13 7.5E-18 83.9 8.2 69 17-93 41-110 (110)
23 cd03204 GST_C_GDAP1 GST_C fami 99.5 3E-13 6.6E-18 85.6 7.8 77 13-93 23-111 (111)
24 cd03182 GST_C_GTT2_like GST_C 99.5 3.1E-13 6.7E-18 85.3 7.8 73 15-93 45-117 (117)
25 cd03206 GST_C_7 GST_C family, 99.5 4.3E-13 9.4E-18 82.8 8.0 73 14-93 28-100 (100)
26 cd03189 GST_C_GTT1_like GST_C 99.5 4.7E-13 1E-17 84.7 7.8 67 18-91 53-119 (119)
27 cd03208 GST_C_Alpha GST_C fami 99.4 7E-13 1.5E-17 86.7 8.3 70 23-98 43-114 (137)
28 PF13410 GST_C_2: Glutathione 99.4 2.6E-13 5.7E-18 78.4 5.4 68 15-86 2-69 (69)
29 cd03181 GST_C_EFB1gamma GST_C 99.4 4.6E-13 9.9E-18 85.2 6.6 82 15-100 36-117 (123)
30 PLN02817 glutathione dehydroge 99.4 2.4E-12 5.3E-17 92.6 10.6 87 21-109 173-261 (265)
31 PLN02378 glutathione S-transfe 99.4 2E-12 4.3E-17 90.0 9.2 86 18-105 117-205 (213)
32 PRK13972 GSH-dependent disulfi 99.4 1.2E-12 2.6E-17 91.0 7.4 74 16-97 129-203 (215)
33 PRK10542 glutathionine S-trans 99.4 1.5E-12 3.4E-17 89.2 7.8 73 18-97 123-195 (201)
34 PLN02473 glutathione S-transfe 99.4 7.8E-13 1.7E-17 91.6 6.3 77 17-97 133-209 (214)
35 TIGR01262 maiA maleylacetoacet 99.4 3E-12 6.5E-17 88.3 8.2 73 20-99 130-204 (210)
36 PRK11752 putative S-transferas 99.4 1.6E-12 3.5E-17 93.3 6.9 81 18-98 177-257 (264)
37 PLN02395 glutathione S-transfe 99.3 4.2E-12 9.1E-17 88.0 7.5 79 16-98 131-209 (215)
38 PRK10357 putative glutathione 99.3 8.2E-12 1.8E-16 85.8 8.5 79 17-100 123-201 (202)
39 cd03202 GST_C_etherase_LigE GS 99.3 7.2E-12 1.6E-16 80.5 7.5 68 17-89 56-123 (124)
40 cd03194 GST_C_3 GST_C family, 99.3 1E-11 2.3E-16 78.7 7.9 69 19-97 41-112 (114)
41 PTZ00057 glutathione s-transfe 99.3 6.2E-12 1.3E-16 86.9 6.8 73 19-97 123-197 (205)
42 cd03179 GST_C_1 GST_C family, 99.3 1.4E-11 3E-16 76.1 7.0 68 14-88 38-105 (105)
43 cd00299 GST_C_family Glutathio 99.3 3E-11 6.6E-16 73.3 7.5 70 14-87 31-100 (100)
44 cd03195 GST_C_4 GST_C family, 99.3 1.4E-11 3E-16 78.1 6.1 72 16-97 39-111 (114)
45 cd03193 GST_C_Metaxin GST_C fa 99.3 5.1E-12 1.1E-16 76.3 3.9 72 15-88 15-88 (88)
46 PRK10387 glutaredoxin 2; Provi 99.2 4.9E-11 1.1E-15 82.2 5.6 68 18-94 141-208 (210)
47 cd03200 GST_C_JTV1 GST_C famil 99.2 1.3E-10 2.8E-15 71.6 6.6 58 22-89 38-95 (96)
48 COG0625 Gst Glutathione S-tran 99.2 1.8E-10 3.9E-15 79.7 7.8 73 15-94 127-199 (211)
49 cd03192 GST_C_Sigma_like GST_C 99.1 1E-10 2.3E-15 72.3 5.6 69 14-87 34-104 (104)
50 PF14497 GST_C_3: Glutathione 99.1 1.3E-10 2.8E-15 71.6 4.4 68 14-89 30-99 (99)
51 PRK15113 glutathione S-transfe 99.0 7.6E-10 1.7E-14 76.9 6.6 73 17-99 135-208 (214)
52 cd03205 GST_C_6 GST_C family, 99.0 1.1E-09 2.4E-14 67.3 6.6 67 14-87 32-98 (98)
53 COG0435 ECM4 Predicted glutath 99.0 2.5E-10 5.5E-15 81.6 2.9 91 7-97 191-284 (324)
54 cd03211 GST_C_Metaxin2 GST_C f 99.0 8.5E-10 1.8E-14 71.2 5.1 72 16-88 54-126 (126)
55 KOG4420 Uncharacterized conser 99.0 5E-09 1.1E-13 74.5 9.0 89 15-105 201-293 (325)
56 TIGR02182 GRXB Glutaredoxin, G 98.9 7.4E-10 1.6E-14 76.9 4.0 67 18-94 140-207 (209)
57 cd03212 GST_C_Metaxin1_3 GST_C 98.9 3.6E-09 7.8E-14 69.2 6.9 73 16-89 61-134 (137)
58 KOG0867 Glutathione S-transfer 98.9 5.8E-09 1.3E-13 73.5 8.0 83 13-99 127-209 (226)
59 cd03197 GST_C_mPGES2 GST_C fam 98.9 1E-08 2.3E-13 67.8 7.3 63 22-89 82-145 (149)
60 KOG2903 Predicted glutathione 98.8 3.1E-09 6.7E-14 75.6 2.1 86 11-97 194-286 (319)
61 KOG1422 Intracellular Cl- chan 98.7 6.8E-08 1.5E-12 66.7 6.9 87 20-108 124-214 (221)
62 PLN02907 glutamate-tRNA ligase 98.7 4.8E-08 1E-12 78.7 6.6 66 23-92 94-159 (722)
63 KOG1695 Glutathione S-transfer 98.6 2.2E-07 4.8E-12 64.6 6.3 72 21-97 125-198 (206)
64 KOG0868 Glutathione S-transfer 98.3 2.4E-06 5.2E-11 58.0 5.4 72 22-100 135-208 (217)
65 KOG4244 Failed axon connection 98.2 6.3E-07 1.4E-11 64.0 1.6 70 18-89 202-272 (281)
66 PF14834 GST_C_4: Glutathione 97.7 0.00012 2.6E-09 46.4 5.2 70 18-97 42-112 (117)
67 KOG3027 Mitochondrial outer me 97.5 0.00026 5.6E-09 49.3 5.0 76 13-89 171-247 (257)
68 PF04399 Glutaredoxin2_C: Glut 97.3 0.00052 1.1E-08 44.7 4.4 66 18-93 58-124 (132)
69 KOG3029 Glutathione S-transfer 97.2 0.0017 3.6E-08 47.3 6.2 64 21-89 290-354 (370)
70 cd03199 GST_C_GRX2 GST_C famil 97.0 0.0036 7.9E-08 40.5 6.3 65 19-93 60-125 (128)
71 KOG3028 Translocase of outer m 96.7 0.0038 8.3E-08 45.8 4.9 70 17-89 161-233 (313)
72 PF11801 Tom37_C: Tom37 C-term 93.0 0.37 7.9E-06 32.6 5.5 36 24-59 113-152 (168)
73 COG2999 GrxB Glutaredoxin 2 [P 89.5 0.89 1.9E-05 31.3 4.4 65 19-93 142-207 (215)
74 KOG1147 Glutamyl-tRNA syntheta 84.3 0.8 1.7E-05 36.6 2.2 59 23-85 92-150 (712)
75 COG3396 Uncharacterized conser 61.6 20 0.00044 26.1 4.4 79 1-89 62-143 (265)
76 KOG1668 Elongation factor 1 be 52.4 10 0.00023 27.0 1.7 55 25-90 10-64 (231)
77 COG3253 ywfI Predicted heme pe 36.1 71 0.0015 22.9 3.8 33 20-52 191-226 (230)
78 PF07182 DUF1402: Protein of u 31.6 74 0.0016 23.4 3.4 22 39-60 173-194 (303)
79 cd06891 PX_Vps17p The phosphoi 26.3 44 0.00095 22.0 1.4 17 78-94 112-128 (140)
80 PF10414 CysG_dimeriser: Siroh 25.1 1.2E+02 0.0026 16.3 2.9 9 81-89 28-36 (60)
81 PF08020 DUF1706: Protein of u 24.8 2.3E+02 0.0049 19.1 5.2 28 37-65 34-62 (166)
82 PRK15371 effector protein YopJ 23.9 1.1E+02 0.0024 22.7 3.2 37 20-57 24-60 (287)
83 PF03421 YopJ: YopJ Serine/Thr 21.7 1.2E+02 0.0026 20.6 2.9 36 22-58 2-37 (177)
84 TIGR02978 phageshock_pspC phag 21.6 69 0.0015 20.5 1.6 33 16-48 81-114 (121)
85 COG1826 TatA Sec-independent p 21.6 1.7E+02 0.0037 17.6 3.3 33 46-88 4-36 (94)
86 PF07862 Nif11: Nitrogen fixat 21.0 1.4E+02 0.003 15.3 2.8 31 78-108 4-37 (49)
87 cd07993 LPLAT_DHAPAT-like Lyso 20.8 2.1E+02 0.0045 19.4 4.0 20 38-57 22-42 (205)
88 PHA01817 hypothetical protein 20.5 82 0.0018 23.7 2.0 45 5-49 210-255 (479)
89 COG2879 Uncharacterized small 20.2 1.4E+02 0.0031 16.9 2.5 17 76-92 21-38 (65)
90 PRK10697 DNA-binding transcrip 20.2 65 0.0014 20.6 1.3 33 16-48 78-111 (118)
No 1
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.78 E-value=7.1e-18 Score=107.89 Aligned_cols=105 Identities=36% Similarity=0.579 Sum_probs=84.2
Q ss_pred hHHHHhhc-CchHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHH
Q 045149 5 VAVWRMFH-SNRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAW 83 (118)
Q Consensus 5 ~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w 83 (118)
|++..++. .++..+...+.+...++.+|+.|++++|++|+++|+|||++++.+.|+.......+.+.++.+.+|+|.+|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w 99 (126)
T cd03185 20 PAGRKVLAAKGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAW 99 (126)
T ss_pred HHHHHHHccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHH
Confidence 45555555 55566678888999999999999888999999999999999999888754333333332234679999999
Q ss_pred HHHHhcCchhhhcCCChhHHHHHHHH
Q 045149 84 FEIFKKAPVIEENLPDQDGISLFFKR 109 (118)
Q Consensus 84 ~~r~~~~p~v~~~~~~~~~~~~~~~~ 109 (118)
+++|.++|+++++++..+..++++++
T Consensus 100 ~~~~~~~p~~~~~~~~~~~~~~~~~~ 125 (126)
T cd03185 100 AERFLELEAVKEVLPDRDKLVEFAKA 125 (126)
T ss_pred HHHHHhccHHHHhCCCHHHHHHHHHh
Confidence 99999999999999998888887664
No 2
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.74 E-value=1.3e-17 Score=107.06 Aligned_cols=105 Identities=23% Similarity=0.441 Sum_probs=83.6
Q ss_pred hhHHHHhhcCchHHHHHHHHHHHHHHHHHhhcCC--CceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHH
Q 045149 4 GVAVWRMFHSNRDQESRMKAILEMLQTIEEHGLR--EKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLN 81 (118)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~ 81 (118)
.++.++.+..++..++..+.+...+..+|+.|++ ++|++|+++|+|||++++.+.++.......+. .+..+++|+|.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~-~~~~~~~p~l~ 95 (124)
T cd03184 17 VSAFYKLLGAPSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGY-EFPLDRFPKLK 95 (124)
T ss_pred hHHHHHHHhccccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccc-cCCcccChHHH
Confidence 3455566554556678888999999999999974 89999999999999999888776543222221 12346899999
Q ss_pred HHHHHHhcCchhhhcCCChhHHHHHHHH
Q 045149 82 AWFEIFKKAPVIEENLPDQDGISLFFKR 109 (118)
Q Consensus 82 ~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 109 (118)
+|+++|.++|+++.++++.+.++++++.
T Consensus 96 ~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 123 (124)
T cd03184 96 KWMDAMKEDPAVQAFYTDTEIHAEFLKS 123 (124)
T ss_pred HHHHHhccChHHHHHhCCHHHHHHHHhc
Confidence 9999999999999999999999998874
No 3
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.74 E-value=3.2e-17 Score=105.24 Aligned_cols=103 Identities=15% Similarity=0.297 Sum_probs=81.3
Q ss_pred hhHHHHhhcCchHHHHHHHHHHHHHHHHHhhcCC-CceeecCCCChHHHHHHHHHHHHHHHHH-HhcCCCCCCCCCCcHH
Q 045149 4 GVAVWRMFHSNRDQESRMKAILEMLQTIEEHGLR-EKIFHGDKIGLLDIAFGSMLYWLQILED-IVGVQLFDPHKFPGLN 81 (118)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~f~~G~~~t~aDi~~~~~~~~~~~~~~-~~~~~~~~~~~~p~L~ 81 (118)
.|..++++......++..+++...+..||..|++ ++||+||++|+|||++++.+.++..... ..+..+ ++.+|+|.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~--~~~~P~l~ 92 (121)
T cd03201 15 FSTFVGFLKSKDSNDGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSV--PESLTSVK 92 (121)
T ss_pred HHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCC--cccchHHH
Confidence 5678888883333366778899999999999984 7999999999999999998766543211 123322 36899999
Q ss_pred HHHHHHhcCchhhhcCCChhHHHHHHH
Q 045149 82 AWFEIFKKAPVIEENLPDQDGISLFFK 108 (118)
Q Consensus 82 ~w~~r~~~~p~v~~~~~~~~~~~~~~~ 108 (118)
+|++||.+||+|+.++++.+++++.++
T Consensus 93 ~w~~rl~~rps~~~t~~~~~~~~~~~~ 119 (121)
T cd03201 93 SYMKALFSRESFVKTKAEKEDVIAGWA 119 (121)
T ss_pred HHHHHHHCCchhhhcCCCHHHHHHHhc
Confidence 999999999999999999888887765
No 4
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.73 E-value=2.9e-17 Score=107.94 Aligned_cols=109 Identities=14% Similarity=0.197 Sum_probs=85.2
Q ss_pred hhHHHHhhc--CchHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHH-HHhcCCCCCCCCCCcH
Q 045149 4 GVAVWRMFH--SNRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILE-DIVGVQLFDPHKFPGL 80 (118)
Q Consensus 4 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~-~~~~~~~~~~~~~p~L 80 (118)
+|+.++++. +++..++..+.+...|+.+|+.|++++|++|+++|+|||++++.+.++.... ..........++||+|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L 99 (142)
T cd03190 20 NNGVYKAGFATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNL 99 (142)
T ss_pred hhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchH
Confidence 456677755 6677788889999999999999998999999999999999998876543211 1111111112489999
Q ss_pred HHHHHHHhcCchhhhcCCChhHHHHHHHHHHH
Q 045149 81 NAWFEIFKKAPVIEENLPDQDGISLFFKRRRE 112 (118)
Q Consensus 81 ~~w~~r~~~~p~v~~~~~~~~~~~~~~~~~~~ 112 (118)
.+|++||.++|+++++....+...+|++++++
T Consensus 100 ~~w~~r~~~~P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 100 WNYLRRLYQNPGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred HHHHHHHhcCchHhhhcCHHHHHHHHHhhcCC
Confidence 99999999999999998888888889988754
No 5
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=1.1e-16 Score=112.12 Aligned_cols=103 Identities=29% Similarity=0.535 Sum_probs=90.1
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcC-CCceeecCCCChHHHHHHHHH-HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcC
Q 045149 13 SNRDQESRMKAILEMLQTIEEHGL-REKIFHGDKIGLLDIAFGSML-YWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKA 90 (118)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~le~~L~-~~~f~~G~~~t~aDi~~~~~~-~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~ 90 (118)
.++..+.+.+++...|..+|+.|. +++||+|+++|++||++.+.+ .|........+.+.+..+++|+|.+|++||.++
T Consensus 123 ~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~ 202 (231)
T KOG0406|consen 123 GGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKED 202 (231)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcC
Confidence 457888899999999999999998 889999999999999998666 566555555555666678999999999999999
Q ss_pred chhhhcCCChhHHHHHHHHHHHHhh
Q 045149 91 PVIEENLPDQDGISLFFKRRREKWL 115 (118)
Q Consensus 91 p~v~~~~~~~~~~~~~~~~~~~~~~ 115 (118)
|+|++++++.++++++++.+++.+.
T Consensus 203 ~~V~~~~p~~e~~~e~~~~~~~~~~ 227 (231)
T KOG0406|consen 203 EAVKAVLPDSEKVVEFMKKYRQGSP 227 (231)
T ss_pred hhHHhhcCCHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998754
No 6
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.69 E-value=4.5e-16 Score=101.45 Aligned_cols=103 Identities=17% Similarity=0.248 Sum_probs=79.5
Q ss_pred hhHHHHhhc--CchHHHHHHHHHHHHHHHHHhhcCC----------------CceeecCCCChHHHHHHHHHHHHHHHHH
Q 045149 4 GVAVWRMFH--SNRDQESRMKAILEMLQTIEEHGLR----------------EKIFHGDKIGLLDIAFGSMLYWLQILED 65 (118)
Q Consensus 4 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~le~~L~~----------------~~f~~G~~~t~aDi~~~~~~~~~~~~~~ 65 (118)
.|.+..++. .++..+...+.+...|..||..|++ ++|++|+++|+|||.+++.+.++.....
T Consensus 12 f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~ 91 (134)
T cd03198 12 FAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAK 91 (134)
T ss_pred HHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 344555555 3455566777899999999999976 6799999999999999998876643221
Q ss_pred -HhcCCCCCCCCCCcHHHHHHHHhcCchhhhcCCChhHHHHHHH
Q 045149 66 -IVGVQLFDPHKFPGLNAWFEIFKKAPVIEENLPDQDGISLFFK 108 (118)
Q Consensus 66 -~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~~~~~~~~~~~~~ 108 (118)
..+..+ +++||+|.+|++|+.+||+++++++..+.++..++
T Consensus 92 ~~~g~~i--~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~~ 133 (134)
T cd03198 92 KYRNFEI--PADLTGLWRYLKNAYQREEFTNTCPADQEIELAYK 133 (134)
T ss_pred hhcCCCc--cccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHhc
Confidence 124433 36899999999999999999999988877776553
No 7
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.64 E-value=1.4e-15 Score=97.26 Aligned_cols=82 Identities=22% Similarity=0.347 Sum_probs=66.2
Q ss_pred HHHHHHHHHHhhcC---CCceeecCCCChHHHHHHHHHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhcCC
Q 045149 23 AILEMLQTIEEHGL---REKIFHGDKIGLLDIAFGSMLYWLQIL-EDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEENLP 98 (118)
Q Consensus 23 ~~~~~l~~le~~L~---~~~f~~G~~~t~aDi~~~~~~~~~~~~-~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~~~ 98 (118)
++...++.||+.|+ +++|++| ++|+|||++++.+.++... ....+.++ .+++|+|.+|+++|.++|+++++.+
T Consensus 34 ~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~--~~~~P~l~~W~~~~~~rp~~~~~~~ 110 (120)
T cd03203 34 EAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDI--TEGRPNLAAWIEEMNKIEAYTQTKQ 110 (120)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccc--cccCcHHHHHHHHHhcchHHHhHcC
Confidence 45667788888886 5899999 9999999999988766432 22344443 2589999999999999999999999
Q ss_pred ChhHHHHHH
Q 045149 99 DQDGISLFF 107 (118)
Q Consensus 99 ~~~~~~~~~ 107 (118)
+.+++++++
T Consensus 111 ~~~~~~~~~ 119 (120)
T cd03203 111 DPQELLDLA 119 (120)
T ss_pred CHHHHHhhh
Confidence 999999875
No 8
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.63 E-value=3.9e-15 Score=92.87 Aligned_cols=86 Identities=19% Similarity=0.296 Sum_probs=68.7
Q ss_pred hHHHHhhc-CchHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHH
Q 045149 5 VAVWRMFH-SNRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAW 83 (118)
Q Consensus 5 ~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w 83 (118)
|+...++. .++..+...+.+...+..+|+.|++++|++|+++|+|||++++.+.++. ..+.++ .+.+|+|.+|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~----~~~~~~--~~~~p~l~~w 93 (107)
T cd03186 20 PLVDTIEKGRKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLP----ALGIEL--PKQAKPLKDY 93 (107)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHH----HcCCCC--cccchHHHHH
Confidence 44555555 4666677888899999999999999999999999999999998875443 124333 2479999999
Q ss_pred HHHHhcCchhhhc
Q 045149 84 FEIFKKAPVIEEN 96 (118)
Q Consensus 84 ~~r~~~~p~v~~~ 96 (118)
+++|.+||+++.+
T Consensus 94 ~~~~~~rpa~~~~ 106 (107)
T cd03186 94 MERVFARDSFQKS 106 (107)
T ss_pred HHHHHCCHHHHHh
Confidence 9999999999875
No 9
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.62 E-value=8.6e-15 Score=103.63 Aligned_cols=94 Identities=18% Similarity=0.329 Sum_probs=78.0
Q ss_pred hHHHHHHHHHHHHHHHHHhhcC------------------CCceeecCCCChHHHHHHHHHHHHHHH-HHHhcCCCCCCC
Q 045149 15 RDQESRMKAILEMLQTIEEHGL------------------REKIFHGDKIGLLDIAFGSMLYWLQIL-EDIVGVQLFDPH 75 (118)
Q Consensus 15 ~~~~~~~~~~~~~l~~le~~L~------------------~~~f~~G~~~t~aDi~~~~~~~~~~~~-~~~~~~~~~~~~ 75 (118)
...++..+++...+..||+.|. +++||+|+++|+|||++++.+.++..+ ....++++ ++
T Consensus 119 ~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i--~~ 196 (236)
T TIGR00862 119 EANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDI--PA 196 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCc--cc
Confidence 3445555668899999999986 579999999999999999999887654 23446554 57
Q ss_pred CCCcHHHHHHHHhcCchhhhcCCChhHHHHHHHHH
Q 045149 76 KFPGLNAWFEIFKKAPVIEENLPDQDGISLFFKRR 110 (118)
Q Consensus 76 ~~p~L~~w~~r~~~~p~v~~~~~~~~~~~~~~~~~ 110 (118)
+||+|.+|++++.++|+|+.++|+.+.++..+...
T Consensus 197 ~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~ 231 (236)
T TIGR00862 197 EFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADV 231 (236)
T ss_pred cCchHHHHHHHHhccchHHhhCCChHHHHHHHHHH
Confidence 99999999999999999999999999998877765
No 10
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.60 E-value=8.5e-15 Score=93.05 Aligned_cols=79 Identities=20% Similarity=0.359 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhh
Q 045149 15 RDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIE 94 (118)
Q Consensus 15 ~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~ 94 (118)
++.+...+.+...+..+|+.|++++|++|+++|+|||++++.+.|+.... ...++.++||+|.+|+++|.++|+++
T Consensus 37 ~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~----~~~~~~~~~P~L~~w~~r~~~rpa~~ 112 (115)
T cd03196 37 ESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVD----PKWFDQSPYPRLRRWLNGFLASPLFS 112 (115)
T ss_pred ccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhh----hcccCcccCHHHHHHHHHHHcChHHH
Confidence 35777888999999999999998899999999999999998776654311 11122368999999999999999998
Q ss_pred hcC
Q 045149 95 ENL 97 (118)
Q Consensus 95 ~~~ 97 (118)
+++
T Consensus 113 ~~~ 115 (115)
T cd03196 113 KIM 115 (115)
T ss_pred hhC
Confidence 763
No 11
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.58 E-value=8.1e-15 Score=89.38 Aligned_cols=71 Identities=31% Similarity=0.505 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCc
Q 045149 16 DQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAP 91 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p 91 (118)
.+++...++...|..+|+.|++++|++||++|+||+++++.+.|+... +.... .++||+|.+|++||.+||
T Consensus 25 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 25 MVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERL----GPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHH----TTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHh----CCCcc-cccCHHHHHHHHHHHcCC
Confidence 556677888899999999999999999999999999999999887653 22222 268999999999999997
No 12
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.56 E-value=3.2e-14 Score=88.13 Aligned_cols=77 Identities=17% Similarity=0.329 Sum_probs=65.4
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCch
Q 045149 13 SNRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPV 92 (118)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~ 92 (118)
.++..+...+++...++.+|..|++++|++|+++|+|||++++.+.|.... + .+ +.+|+|.+|++++.++|+
T Consensus 24 ~~~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~----~--~~--~~~p~l~~w~~~~~~~p~ 95 (103)
T cd03207 24 EEPARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF----G--LL--PERPAFDAYIARITDRPA 95 (103)
T ss_pred CcchhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc----C--CC--CCChHHHHHHHHHHcCHH
Confidence 455567778889999999999999889999999999999999888886431 2 22 479999999999999999
Q ss_pred hhhcC
Q 045149 93 IEENL 97 (118)
Q Consensus 93 v~~~~ 97 (118)
++.+.
T Consensus 96 ~~~~~ 100 (103)
T cd03207 96 FQRAA 100 (103)
T ss_pred HHHHh
Confidence 99875
No 13
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.56 E-value=1.8e-14 Score=90.25 Aligned_cols=74 Identities=19% Similarity=0.350 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhc
Q 045149 17 QESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEEN 96 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~ 96 (118)
.+...+.+...+..+|+.|++++|++|+++|+|||++++.+.|+.. .+ ++.+++|+|.+|+++|.++|+++++
T Consensus 41 ~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~---~~~~~~p~l~~w~~~~~~~p~~k~~ 113 (114)
T cd03188 41 KAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPG----VG---LDLSDWPNLAAYLARVAARPAVQAA 113 (114)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhh----cC---CChhhChHHHHHHHHHHhCHHhHhh
Confidence 4556677889999999999988999999999999999988877532 12 2235899999999999999999875
Q ss_pred C
Q 045149 97 L 97 (118)
Q Consensus 97 ~ 97 (118)
+
T Consensus 114 ~ 114 (114)
T cd03188 114 L 114 (114)
T ss_pred C
Confidence 3
No 14
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.54 E-value=4.8e-14 Score=90.02 Aligned_cols=78 Identities=21% Similarity=0.314 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhh
Q 045149 15 RDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIE 94 (118)
Q Consensus 15 ~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~ 94 (118)
...+...+.+...+..+|+.|++++|++|+++|+||+++++.+.|+... +...+ ++||+|.+|++||.++|+++
T Consensus 31 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~----~~~~~--~~~P~l~~~~~rv~~~p~vk 104 (121)
T cd03209 31 KLKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIF----EPDCL--DAFPNLKDFLERFEALPKIS 104 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHh----Ccccc--ccChHHHHHHHHHHHCHHHH
Confidence 3445566778889999999999889999999999999999888887531 11222 48999999999999999999
Q ss_pred hcCC
Q 045149 95 ENLP 98 (118)
Q Consensus 95 ~~~~ 98 (118)
+++.
T Consensus 105 ~~~~ 108 (121)
T cd03209 105 AYMK 108 (121)
T ss_pred HHHh
Confidence 8764
No 15
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.53 E-value=5.1e-14 Score=88.82 Aligned_cols=78 Identities=19% Similarity=0.241 Sum_probs=62.4
Q ss_pred chHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchh
Q 045149 14 NRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVI 93 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v 93 (118)
+...+...+.+...++.+|+.|++++|++|+++|+|||++++++.++... +.. ...+++|+|.+|+++|.++|++
T Consensus 40 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~----~~~-~~~~~~p~l~~~~~~~~~~p~~ 114 (118)
T cd03187 40 EAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMAT----PFA-KLFDSRPHVKAWWEDISARPAW 114 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHc----cch-hhhhcCchHHHHHHHHHhCHHH
Confidence 34455667788999999999999889999999999999999888765421 111 1134799999999999999999
Q ss_pred hhc
Q 045149 94 EEN 96 (118)
Q Consensus 94 ~~~ 96 (118)
+++
T Consensus 115 ~~~ 117 (118)
T cd03187 115 KKV 117 (118)
T ss_pred Hhh
Confidence 865
No 16
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.50 E-value=1.5e-13 Score=87.94 Aligned_cols=78 Identities=19% Similarity=0.279 Sum_probs=61.9
Q ss_pred chHHHHHHHHHHHHHHHHHhh-cCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhc--C
Q 045149 14 NRDQESRMKAILEMLQTIEEH-GLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKK--A 90 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~-L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~--~ 90 (118)
++..+...+.+...+..+|+. +++++|++|+++|+|||++++.+.|... .+.+. .+++|+|.+|+++|.+ |
T Consensus 40 ~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~----~~~~~--~~~~p~l~~w~~~~~~~~~ 113 (126)
T cd03183 40 PEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEA----AGYDV--FEGRPKLAAWRKRVKEAGN 113 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHh----cCCcc--cccCchHHHHHHHHHHhcc
Confidence 445566777899999999997 4557899999999999999887766532 23322 3589999999999999 9
Q ss_pred chhhhcC
Q 045149 91 PVIEENL 97 (118)
Q Consensus 91 p~v~~~~ 97 (118)
|+++++.
T Consensus 114 p~~~~~~ 120 (126)
T cd03183 114 PLFDEAH 120 (126)
T ss_pred hhHHHHH
Confidence 9998754
No 17
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.49 E-value=1.9e-13 Score=86.68 Aligned_cols=78 Identities=24% Similarity=0.410 Sum_probs=64.6
Q ss_pred chHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchh
Q 045149 14 NRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVI 93 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v 93 (118)
+...+...+++...+..+|+.|++++|++|+++|+|||++++++.|+... .+. +.+.+|+|.+|+++|.++|++
T Consensus 33 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~---~~~---~~~~~p~l~~w~~~~~~~p~~ 106 (118)
T cd03177 33 AEPPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEAL---LPL---DLSKYPNVRAWLERLKALPPY 106 (118)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHh---cCC---ChhhCchHHHHHHHHHcccch
Confidence 34556677889999999999998889999999999999999988887421 222 234799999999999999999
Q ss_pred hhcC
Q 045149 94 EENL 97 (118)
Q Consensus 94 ~~~~ 97 (118)
++..
T Consensus 107 ~~~~ 110 (118)
T cd03177 107 EEAN 110 (118)
T ss_pred HHHH
Confidence 9854
No 18
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.49 E-value=2.6e-13 Score=94.13 Aligned_cols=84 Identities=15% Similarity=0.240 Sum_probs=67.8
Q ss_pred chHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchh
Q 045149 14 NRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVI 93 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v 93 (118)
++..+...+.+...+..+|+.|.+++|++|+++|+||+++++.+.++.. .+.++. .+.||+|.+|++|+.+||++
T Consensus 122 ~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~----~~~~~~-~~~~p~l~~w~~~~~~rp~~ 196 (211)
T PRK09481 122 ASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPV----LGIELS-GPGAKELKGYMTRVFERDSF 196 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHh----cCCCCC-CCCChhHHHHHHHHhccHHH
Confidence 4455667778888999999999989999999999999999988766532 233332 25799999999999999999
Q ss_pred hhcCCChhH
Q 045149 94 EENLPDQDG 102 (118)
Q Consensus 94 ~~~~~~~~~ 102 (118)
++++.+.++
T Consensus 197 ~~~~~~~~~ 205 (211)
T PRK09481 197 LASLTEAER 205 (211)
T ss_pred HHHcCHHHH
Confidence 998876544
No 19
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.48 E-value=2.1e-13 Score=87.76 Aligned_cols=78 Identities=23% Similarity=0.311 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCC---CceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCc
Q 045149 15 RDQESRMKAILEMLQTIEEHGLR---EKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAP 91 (118)
Q Consensus 15 ~~~~~~~~~~~~~l~~le~~L~~---~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p 91 (118)
...+...+.+...+..+|+.|++ ++|++|+++|+||+++++.+.|+... +... .++||+|.+|++||.++|
T Consensus 31 ~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~----~~~~--~~~~P~l~~~~~rv~~~p 104 (126)
T cd03210 31 AGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL----APGC--LDAFPLLKAFVERLSARP 104 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh----ChHh--hhcChHHHHHHHHHHhCc
Confidence 44556667788999999999963 58999999999999999888887431 1112 258999999999999999
Q ss_pred hhhhcCC
Q 045149 92 VIEENLP 98 (118)
Q Consensus 92 ~v~~~~~ 98 (118)
+|+++..
T Consensus 105 ~v~~~~~ 111 (126)
T cd03210 105 KLKAYLE 111 (126)
T ss_pred HHHHHHh
Confidence 9998764
No 20
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.48 E-value=8.6e-14 Score=87.32 Aligned_cols=78 Identities=17% Similarity=0.339 Sum_probs=63.6
Q ss_pred chHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchh
Q 045149 14 NRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVI 93 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v 93 (118)
+...+.....+...++.+|+.|++++|++|+++|+|||++++.+.|.... +.+. .+++|+|.+|+++|.++|++
T Consensus 35 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~~~p~~ 108 (113)
T cd03178 35 PYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWI----GIDD--LDDFPNVKRWLDRIAARPAV 108 (113)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhc----cccc--hhhchHHHHHHHHHhhCHHH
Confidence 33455677888999999999999889999999999999998888776421 2221 35899999999999999999
Q ss_pred hhcC
Q 045149 94 EENL 97 (118)
Q Consensus 94 ~~~~ 97 (118)
++++
T Consensus 109 ~~~~ 112 (113)
T cd03178 109 QRGL 112 (113)
T ss_pred HHhc
Confidence 9864
No 21
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.48 E-value=3.2e-13 Score=85.86 Aligned_cols=73 Identities=23% Similarity=0.281 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHhhcC--CCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhcC
Q 045149 20 RMKAILEMLQTIEEHGL--REKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEENL 97 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~--~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~~ 97 (118)
..+.+...+..+|..|+ +++|++|+++|+|||++++.+.|+.. .+. +.+.+|+|.+|++|+.++|+++++.
T Consensus 45 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~----~~~---~~~~~p~l~~w~~~~~~~p~~~~~~ 117 (121)
T cd03191 45 YRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARR----FGV---DLSPYPTIARINEACLELPAFQAAH 117 (121)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHH----hCC---CcccCcHHHHHHHHHHhChhHHHhC
Confidence 44567889999999997 45799999999999999998877643 122 2358999999999999999999986
Q ss_pred CC
Q 045149 98 PD 99 (118)
Q Consensus 98 ~~ 99 (118)
+.
T Consensus 118 ~~ 119 (121)
T cd03191 118 PD 119 (121)
T ss_pred cC
Confidence 53
No 22
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.47 E-value=3.5e-13 Score=83.91 Aligned_cols=69 Identities=19% Similarity=0.522 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHH-HHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchh
Q 045149 17 QESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLY-WLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVI 93 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~-~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v 93 (118)
.+...+.+...++.+|+.|++++|++|+++|+|||++++.+. |.. .+ +..++||+|.+|+++|.++|+|
T Consensus 41 ~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~-----~~---~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 41 IAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFE-----LP---IERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHH-----cc---cccccCchHHHHHHHHHhCCCC
Confidence 455677899999999999998899999999999999988763 431 11 1246899999999999999975
No 23
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.47 E-value=3e-13 Score=85.59 Aligned_cols=77 Identities=25% Similarity=0.325 Sum_probs=61.2
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcCCC----------ceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCC--CCCCCCcH
Q 045149 13 SNRDQESRMKAILEMLQTIEEHGLRE----------KIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLF--DPHKFPGL 80 (118)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~le~~L~~~----------~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~--~~~~~p~L 80 (118)
+.+..+...+++...+..||..|.++ +|++|+++|+|||++++.+.|+... +.+.- ....||+|
T Consensus 23 ~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~----~~~~~~~~~~~~P~l 98 (111)
T cd03204 23 NVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL----GLSRRYWGNGKRPNL 98 (111)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc----CccccccccccChHH
Confidence 34556788899999999999999754 5999999999999999988887531 22210 02479999
Q ss_pred HHHHHHHhcCchh
Q 045149 81 NAWFEIFKKAPVI 93 (118)
Q Consensus 81 ~~w~~r~~~~p~v 93 (118)
.+|++||.+||+|
T Consensus 99 ~~w~~rv~aRpsf 111 (111)
T cd03204 99 EAYFERVLQRESF 111 (111)
T ss_pred HHHHHHHHcCCCC
Confidence 9999999999985
No 24
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.47 E-value=3.1e-13 Score=85.26 Aligned_cols=73 Identities=18% Similarity=0.309 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchh
Q 045149 15 RDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVI 93 (118)
Q Consensus 15 ~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v 93 (118)
+..++....+...+..+|+.|++++|++||++|+|||++++.+.|+.. .+.++ ...+|+|.+|++++.++|+|
T Consensus 45 ~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~----~~~~~--~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 45 EWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKV----VKLRV--PEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHh----cCCCC--ccccHHHHHHHHHHHhccCC
Confidence 345667788999999999999988999999999999999998887643 23332 35899999999999999975
No 25
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.46 E-value=4.3e-13 Score=82.80 Aligned_cols=73 Identities=21% Similarity=0.361 Sum_probs=59.9
Q ss_pred chHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchh
Q 045149 14 NRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVI 93 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v 93 (118)
+...+....++...+..+|+.|++++|++|+++|+|||.+++++.|... .+ +..+++|+|.+|++||.++|++
T Consensus 28 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~----~~---~~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 28 PLDKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPE----GG---VDLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhc----cC---CChhhCcHHHHHHHHHHhCcCC
Confidence 3356677889999999999999988999999999999998887765421 11 2245899999999999999975
No 26
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.45 E-value=4.7e-13 Score=84.74 Aligned_cols=67 Identities=22% Similarity=0.263 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCc
Q 045149 18 ESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAP 91 (118)
Q Consensus 18 ~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p 91 (118)
+.....+...++.+|+.|++++|++|+++|+|||++++.+.|+.. .+. ..+++|+|.+|++|+.++|
T Consensus 53 ~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~----~~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 53 GFINPELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALA----RGP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHhHHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHH----cCc---ccccCchHHHHHHHHhcCC
Confidence 345567888999999999989999999999999999988888643 121 2458999999999999987
No 27
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.44 E-value=7e-13 Score=86.70 Aligned_cols=70 Identities=21% Similarity=0.255 Sum_probs=57.3
Q ss_pred HHHHHHHHHHhhcC--CCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhcCC
Q 045149 23 AILEMLQTIEEHGL--REKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEENLP 98 (118)
Q Consensus 23 ~~~~~l~~le~~L~--~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~~~ 98 (118)
.+...+..+|..|+ +++|++|+++|+||+++++.+.|+... .... .+.||+|.+|++|+.++|++++++.
T Consensus 43 ~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~----~~~~--l~~~P~l~~~~~rv~~~P~vk~~~~ 114 (137)
T cd03208 43 AKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEEL----DPSL--LSDFPLLQAFKTRISNLPTIKKFLQ 114 (137)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHh----chhh--hccChHHHHHHHHHHcCHHHHHHHh
Confidence 34678999999997 678999999999999999888886431 1112 2489999999999999999998763
No 28
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.44 E-value=2.6e-13 Score=78.41 Aligned_cols=68 Identities=26% Similarity=0.492 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHH
Q 045149 15 RDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEI 86 (118)
Q Consensus 15 ~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r 86 (118)
...+++.+.+...++.+|+.|++++|++|+++|+||+.+++.+.++..... +..+ .+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~--~~~~--~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGP--DFDL--LEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTH--TCCH--HTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCc--CcCc--cccCHHHHHHHhC
Confidence 456788899999999999999999999999999999999999988765311 1122 3689999999987
No 29
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.43 E-value=4.6e-13 Score=85.16 Aligned_cols=82 Identities=18% Similarity=0.375 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhh
Q 045149 15 RDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIE 94 (118)
Q Consensus 15 ~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~ 94 (118)
...+...+.+...++.+|+.|++++|++|+++|+|||++++.+.|+.... .+... .+.+|+|.+|++++.++|+++
T Consensus 36 ~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~--~~~~~--~~~~p~l~~w~~~~~~~p~~~ 111 (123)
T cd03181 36 KSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYV--FDKEW--RAKYPNVTRWFNTVVNQPIFK 111 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHH--cCHHH--HHhChHHHHHHHHHHcCHHHH
Confidence 45566778889999999999998899999999999999998888764311 11111 247999999999999999999
Q ss_pred hcCCCh
Q 045149 95 ENLPDQ 100 (118)
Q Consensus 95 ~~~~~~ 100 (118)
+++.+.
T Consensus 112 ~~~~~~ 117 (123)
T cd03181 112 AVFGEV 117 (123)
T ss_pred HHcCCC
Confidence 987543
No 30
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.42 E-value=2.4e-12 Score=92.57 Aligned_cols=87 Identities=16% Similarity=0.282 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHhhcC-CCceeecCCCChHHHHHHHHHHHHHHHHH-HhcCCCCCCCCCCcHHHHHHHHhcCchhhhcCC
Q 045149 21 MKAILEMLQTIEEHGL-REKIFHGDKIGLLDIAFGSMLYWLQILED-IVGVQLFDPHKFPGLNAWFEIFKKAPVIEENLP 98 (118)
Q Consensus 21 ~~~~~~~l~~le~~L~-~~~f~~G~~~t~aDi~~~~~~~~~~~~~~-~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~~~ 98 (118)
.+.+...+..+|+.|+ +++|++|+++|+|||++++.+.++..... ..++++ .+.||+|.+|+++|.++|+++.+.+
T Consensus 173 ~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i--~~~~P~L~~w~~ri~~rps~~~~~~ 250 (265)
T PLN02817 173 EQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSV--PDSLPFVKSYMKNIFSMESFVKTRA 250 (265)
T ss_pred HHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc--cccCHHHHHHHHHHhcchhHhhcCC
Confidence 3567788999999997 47999999999999999998876643211 123333 3589999999999999999999998
Q ss_pred ChhHHHHHHHH
Q 045149 99 DQDGISLFFKR 109 (118)
Q Consensus 99 ~~~~~~~~~~~ 109 (118)
..+.+++.++.
T Consensus 251 ~~~~~~~~~~~ 261 (265)
T PLN02817 251 LPEDVIAGWRP 261 (265)
T ss_pred CHHHHHHHhHh
Confidence 87777776653
No 31
>PLN02378 glutathione S-transferase DHAR1
Probab=99.41 E-value=2e-12 Score=90.01 Aligned_cols=86 Identities=17% Similarity=0.359 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHhhcC--CCceeecCCCChHHHHHHHHHHHHHHHHH-HhcCCCCCCCCCCcHHHHHHHHhcCchhh
Q 045149 18 ESRMKAILEMLQTIEEHGL--REKIFHGDKIGLLDIAFGSMLYWLQILED-IVGVQLFDPHKFPGLNAWFEIFKKAPVIE 94 (118)
Q Consensus 18 ~~~~~~~~~~l~~le~~L~--~~~f~~G~~~t~aDi~~~~~~~~~~~~~~-~~~~~~~~~~~~p~L~~w~~r~~~~p~v~ 94 (118)
+...+.+...+..+|+.|+ +++|++||++|+||+++++.+.++..... ..+.+. .++||+|.+|+++|.+||+++
T Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~--~~~~p~l~~w~~~~~~rpa~~ 194 (213)
T PLN02378 117 DGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSV--PESFPHVHNYMKTLFSLDSFE 194 (213)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCc--hhHhHHHHHHHHHHhcCCCee
Confidence 3445677788999999997 57899999999999999998877543211 112222 358999999999999999999
Q ss_pred hcCCChhHHHH
Q 045149 95 ENLPDQDGISL 105 (118)
Q Consensus 95 ~~~~~~~~~~~ 105 (118)
++++.....+.
T Consensus 195 ~~~~~~~~~~~ 205 (213)
T PLN02378 195 KTKTEEKYVIS 205 (213)
T ss_pred cccCChHHHHH
Confidence 99877765554
No 32
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.39 E-value=1.2e-12 Score=90.98 Aligned_cols=74 Identities=16% Similarity=0.323 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHH-HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhh
Q 045149 16 DQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSML-YWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIE 94 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~-~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~ 94 (118)
..+...+.+...+..+|..|++++|++|+++|+|||++++.+ .|.. .+ ++.++||+|.+|++||.+||+++
T Consensus 129 ~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~-----~~---~~~~~~P~l~~w~~r~~~rp~~~ 200 (215)
T PRK13972 129 AIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTR-----QR---IDLAMYPAVKNWHERIRSRPATG 200 (215)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhh-----cC---CcchhCHHHHHHHHHHHhCHHHH
Confidence 344555678889999999999889999999999999987766 3331 12 22468999999999999999998
Q ss_pred hcC
Q 045149 95 ENL 97 (118)
Q Consensus 95 ~~~ 97 (118)
++.
T Consensus 201 ~~~ 203 (215)
T PRK13972 201 QAL 203 (215)
T ss_pred HHH
Confidence 765
No 33
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.39 E-value=1.5e-12 Score=89.20 Aligned_cols=73 Identities=15% Similarity=0.271 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhcC
Q 045149 18 ESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEENL 97 (118)
Q Consensus 18 ~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~~ 97 (118)
+...+.+...+..+|..|++++|++|+++|+|||++++.+.|... .+. +.+.+|+|.+|+++|.++|++++++
T Consensus 123 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~----~~~---~~~~~p~l~~w~~~~~~~p~~k~~~ 195 (201)
T PRK10542 123 PTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYA----VKL---NLEGLEHIAAYMQRVAERPAVAAAL 195 (201)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhc----cCC---CcccchHHHHHHHHHHcCHHHHHHH
Confidence 445667888999999999988999999999999999888877632 122 2358999999999999999999875
No 34
>PLN02473 glutathione S-transferase
Probab=99.39 E-value=7.8e-13 Score=91.64 Aligned_cols=77 Identities=16% Similarity=0.229 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhc
Q 045149 17 QESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEEN 96 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~ 96 (118)
.+.....+...++.+|+.|++++|++||++|+||+++++.+.|........ .. .++||+|.+|++|+.+||+++++
T Consensus 133 ~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~--~~--~~~~P~l~~w~~~~~~~p~~~~~ 208 (214)
T PLN02473 133 VEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLS--GL--VTSRENLNRWWNEISARPAWKKL 208 (214)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccH--HH--HhcCHHHHHHHHHHhcChhhHHH
Confidence 344556788899999999998899999999999999998887753211111 11 25899999999999999999986
Q ss_pred C
Q 045149 97 L 97 (118)
Q Consensus 97 ~ 97 (118)
.
T Consensus 209 ~ 209 (214)
T PLN02473 209 M 209 (214)
T ss_pred H
Confidence 5
No 35
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.37 E-value=3e-12 Score=88.32 Aligned_cols=73 Identities=19% Similarity=0.250 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHhhcCC--CceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhcC
Q 045149 20 RMKAILEMLQTIEEHGLR--EKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEENL 97 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~~--~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~~ 97 (118)
..+.+...|+.+|+.|++ ++|++|+++|+|||++++.+.|+... +. +.++||+|.+|+++|.+||++++++
T Consensus 130 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~----~~---~~~~~p~l~~~~~~~~~rp~~~~~~ 202 (210)
T TIGR01262 130 YQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERF----GV---DLTPYPTLRRIAAALAALPAFQRAH 202 (210)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHc----CC---CcccchHHHHHHHHHhcCHHHHHhC
Confidence 445688899999999975 56999999999999999988776421 22 2358999999999999999999987
Q ss_pred CC
Q 045149 98 PD 99 (118)
Q Consensus 98 ~~ 99 (118)
++
T Consensus 203 ~~ 204 (210)
T TIGR01262 203 PE 204 (210)
T ss_pred cc
Confidence 54
No 36
>PRK11752 putative S-transferase; Provisional
Probab=99.37 E-value=1.6e-12 Score=93.33 Aligned_cols=81 Identities=12% Similarity=0.165 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhcC
Q 045149 18 ESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEENL 97 (118)
Q Consensus 18 ~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~~ 97 (118)
+...+++...|..+|+.|++++||+|+++|+|||++++.+.++...........++.+.||+|.+|+++|.+||++++++
T Consensus 177 ~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~ 256 (264)
T PRK11752 177 NRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGR 256 (264)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHH
Confidence 44456678899999999998899999999999999988776653210000011123468999999999999999999876
Q ss_pred C
Q 045149 98 P 98 (118)
Q Consensus 98 ~ 98 (118)
.
T Consensus 257 ~ 257 (264)
T PRK11752 257 I 257 (264)
T ss_pred h
Confidence 4
No 37
>PLN02395 glutathione S-transferase
Probab=99.34 E-value=4.2e-12 Score=87.95 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhh
Q 045149 16 DQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEE 95 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~ 95 (118)
..+...+.+...++.+|+.|++++|++|+++|+||+++++++.|... ..+.. ...+.+|+|.+|++++.++|++++
T Consensus 131 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~---~~~~~-~~~~~~p~L~~w~~~~~~rp~~k~ 206 (215)
T PLN02395 131 VIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVG---PIGKA-YLIKDRKHVSAWWDDISSRPAWKE 206 (215)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhc---ccchh-hhhccCchHHHHHHHHHcChHHHH
Confidence 34556677888999999999988999999999999998887766521 11110 113579999999999999999998
Q ss_pred cCC
Q 045149 96 NLP 98 (118)
Q Consensus 96 ~~~ 98 (118)
++.
T Consensus 207 ~~~ 209 (215)
T PLN02395 207 VLA 209 (215)
T ss_pred HHH
Confidence 753
No 38
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.33 E-value=8.2e-12 Score=85.80 Aligned_cols=79 Identities=16% Similarity=0.141 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhc
Q 045149 17 QESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEEN 96 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~ 96 (118)
.+...+.+...|..+|+.|.+++ ++||++|+|||++++.+.|+.... .+... ..+||+|.+|++|+.+||+++++
T Consensus 123 ~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~--~~~~~--~~~~p~l~~~~~~i~~rp~~~~~ 197 (202)
T PRK10357 123 LLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRR--VAPGW--CVDRPHLVKLVENLFQRESFART 197 (202)
T ss_pred HHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcc--cCcch--hhcChHHHHHHHHHhcChhhhhc
Confidence 34566778899999999998777 999999999999999888764310 01111 24799999999999999999998
Q ss_pred CCCh
Q 045149 97 LPDQ 100 (118)
Q Consensus 97 ~~~~ 100 (118)
.|+.
T Consensus 198 ~~~~ 201 (202)
T PRK10357 198 EPPK 201 (202)
T ss_pred CCCC
Confidence 8763
No 39
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.33 E-value=7.2e-12 Score=80.55 Aligned_cols=68 Identities=15% Similarity=0.206 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhc
Q 045149 17 QESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKK 89 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~ 89 (118)
.++..+.+...++.+|+.|++++|++|+++|+||++++..+.|.... .+.++ .+.+|+|.+|++||.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~---~~~~~--~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIV---SPFPL--LEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHc---Ccccc--cccCChHHHHHHHHhc
Confidence 45677788999999999999999999999999999998888776431 13333 3589999999999976
No 40
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.32 E-value=1e-11 Score=78.69 Aligned_cols=69 Identities=16% Similarity=0.254 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHhhc---CCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhh
Q 045149 19 SRMKAILEMLQTIEEHG---LREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEE 95 (118)
Q Consensus 19 ~~~~~~~~~l~~le~~L---~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~ 95 (118)
...+.+...+..+|..+ ++++|++|| +|+||+++++++.|... .+. + ..|+|.+|++||.++|++++
T Consensus 41 ~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~----~~~---~--~~P~l~~~~~rv~~rPsv~~ 110 (114)
T cd03194 41 AVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRT----YGL---P--LSPAAQAYVDALLAHPAMQE 110 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHH----cCC---C--CCHHHHHHHHHHHCCHHHHH
Confidence 34444445555555544 567899999 99999999988888642 122 2 23999999999999999997
Q ss_pred cC
Q 045149 96 NL 97 (118)
Q Consensus 96 ~~ 97 (118)
.+
T Consensus 111 ~~ 112 (114)
T cd03194 111 WI 112 (114)
T ss_pred HH
Confidence 64
No 41
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.31 E-value=6.2e-12 Score=86.95 Aligned_cols=73 Identities=18% Similarity=0.151 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHhhcCC--CceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhc
Q 045149 19 SRMKAILEMLQTIEEHGLR--EKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEEN 96 (118)
Q Consensus 19 ~~~~~~~~~l~~le~~L~~--~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~ 96 (118)
...+.+...+..+|+.|++ ++|++|+++|+||+++++.+.++... .+. +.++||+|.+|++||.++|+++++
T Consensus 123 ~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~---~~~---~l~~~P~l~~~~~r~~~~P~~k~y 196 (205)
T PTZ00057 123 FLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETK---YPN---SLKNFPLLKAHNEFISNLPNIKNY 196 (205)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHh---Chh---hhccChhHHHHHHHHHhChHHHHH
Confidence 3446678889999999964 48999999999999998887775421 121 235899999999999999999987
Q ss_pred C
Q 045149 97 L 97 (118)
Q Consensus 97 ~ 97 (118)
+
T Consensus 197 ~ 197 (205)
T PTZ00057 197 I 197 (205)
T ss_pred H
Confidence 6
No 42
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.29 E-value=1.4e-11 Score=76.07 Aligned_cols=68 Identities=21% Similarity=0.299 Sum_probs=55.9
Q ss_pred chHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHh
Q 045149 14 NRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFK 88 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~ 88 (118)
++..+...+++...++.+|..|++++|++|+++|+|||++++++.|+.. .+ ++.+++|+|.+|++++.
T Consensus 38 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~----~~---~~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 38 AEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADE----GG---FDLADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccc----cC---CChHhCccHHHHHHhhC
Confidence 4555678888999999999999888999999999999999988887632 12 22357999999999874
No 43
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.27 E-value=3e-11 Score=73.33 Aligned_cols=70 Identities=26% Similarity=0.496 Sum_probs=56.5
Q ss_pred chHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHH
Q 045149 14 NRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIF 87 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~ 87 (118)
++..+...+.+...++.||+.|++++|++|+++|+||+++++++.|+.......+ + .+.+|+|.+|.++|
T Consensus 31 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~--~--~~~~p~l~~~~~~~ 100 (100)
T cd00299 31 EAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLG--L--LDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhh--h--hccCccHHHHHHhC
Confidence 4556777888999999999999989999999999999999999988754321111 1 35899999999875
No 44
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.27 E-value=1.4e-11 Score=78.06 Aligned_cols=72 Identities=17% Similarity=0.130 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcC-CCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhh
Q 045149 16 DQESRMKAILEMLQTIEEHGL-REKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIE 94 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~-~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~ 94 (118)
..+...+.+.+.+..+|..|+ +++|++| .+|+||+++++++.|... .|.++ + |++.+|.+||.+||+|+
T Consensus 39 ~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~----~g~~l---~--p~l~ay~~r~~~rPa~~ 108 (114)
T cd03195 39 LSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVL----NGDPV---P--ERLRDYARRQWQRPSVQ 108 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHH----cCCCC---C--HHHHHHHHHHHCCHHHH
Confidence 445677788888999999995 5589999 599999999999988754 24332 2 99999999999999999
Q ss_pred hcC
Q 045149 95 ENL 97 (118)
Q Consensus 95 ~~~ 97 (118)
+..
T Consensus 109 ~~~ 111 (114)
T cd03195 109 AWL 111 (114)
T ss_pred HHH
Confidence 864
No 45
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.27 E-value=5.1e-12 Score=76.32 Aligned_cols=72 Identities=17% Similarity=0.119 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCCcHHHHHHHHh
Q 045149 15 RDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQL--FDPHKFPGLNAWFEIFK 88 (118)
Q Consensus 15 ~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~--~~~~~~p~L~~w~~r~~ 88 (118)
....+..+++...++.+|+.|++++|++|+++|+|||++++.+.|+... ..+... ...+++|+|.+|++||.
T Consensus 15 ~~~~~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~--~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 15 TLTREIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYA--PLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhc--CCCChHHHHHHHhCcHHHHHHHHhC
Confidence 3445677888999999999999999999999999999999888776421 000000 01247999999999974
No 46
>PRK10387 glutaredoxin 2; Provisional
Probab=99.17 E-value=4.9e-11 Score=82.24 Aligned_cols=68 Identities=15% Similarity=0.163 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhh
Q 045149 18 ESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIE 94 (118)
Q Consensus 18 ~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~ 94 (118)
++..+.+...|..+|..|++ +|++|+++|+||+++++.+.|+... .+ ++ .+|+|.+|++||.+||++.
T Consensus 141 ~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~---~~---~~--~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 141 PGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLV---KG---IE--WPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceee---cC---CC--CCHHHHHHHHHHHHHhCCC
Confidence 35567888899999999986 9999999999999999988887431 11 22 4699999999999999874
No 47
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.16 E-value=1.3e-10 Score=71.63 Aligned_cols=58 Identities=16% Similarity=0.217 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhc
Q 045149 22 KAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKK 89 (118)
Q Consensus 22 ~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~ 89 (118)
+++...+..+|+.|++++|++|+++|+|||++++.+.+. +. ..+.+|+|.+|++||.+
T Consensus 38 ~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~~-------~~---~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 38 KEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQT-------GL---ASAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHHc-------cc---ccccChHHHHHHHHHHh
Confidence 455678889999999999999999999999998776542 11 23579999999999976
No 48
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=1.8e-10 Score=79.73 Aligned_cols=73 Identities=25% Similarity=0.468 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhh
Q 045149 15 RDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIE 94 (118)
Q Consensus 15 ~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~ 94 (118)
...+...+.+...+..+|..|++++|++|+++|+||+.+++.+.|+.. .+.. .+.+|+|.+|++|+.++|++.
T Consensus 127 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~----~~~~---~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 127 AALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLAL----LGEE---LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhh----cCcc---cccChHHHHHHHHHHcCCchh
Confidence 445667788999999999999999999999999999999988887543 1211 257999999999999999954
No 49
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.15 E-value=1e-10 Score=72.30 Aligned_cols=69 Identities=26% Similarity=0.286 Sum_probs=53.6
Q ss_pred chHHHHHHHHHHHHHHHHHhhcCC--CceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHH
Q 045149 14 NRDQESRMKAILEMLQTIEEHGLR--EKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIF 87 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~--~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~ 87 (118)
++..+...+.+...+..+|+.|.+ ++|++|+++|+||+++++.+.|+... +... ..+.||+|.+|++|+
T Consensus 34 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~----~~~~-~~~~~p~l~~~~~~~ 104 (104)
T cd03192 34 EKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYL----DPKL-LLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhh----Cchh-hHHhChhHHHHHHhC
Confidence 344556677788899999999976 89999999999999999988887432 1111 034799999999885
No 50
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.10 E-value=1.3e-10 Score=71.62 Aligned_cols=68 Identities=26% Similarity=0.453 Sum_probs=50.3
Q ss_pred chHHHHHHHHHHHHHHHHHhhcCCCc--eeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhc
Q 045149 14 NRDQESRMKAILEMLQTIEEHGLREK--IFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKK 89 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~--f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~ 89 (118)
+...+...+++...+..+|+.|+++. ||+|+++|+||+++++.+..+.. .+ + +.+||+|.+|++||.+
T Consensus 30 ~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~------~~-~-~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 30 EASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRW------AD-F-PKDYPNLVRWYERIEE 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHC------CH-H-TTTCHHHHHHHHHHHT
T ss_pred hhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhh------cc-c-ccccHHHHHHHHhhcC
Confidence 34556677888999999999997655 99999999999998887643321 11 1 1589999999999964
No 51
>PRK15113 glutathione S-transferase; Provisional
Probab=99.03 E-value=7.6e-10 Score=76.92 Aligned_cols=73 Identities=15% Similarity=0.103 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCC-CceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhh
Q 045149 17 QESRMKAILEMLQTIEEHGLR-EKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEE 95 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~-~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~ 95 (118)
.+...+.+...+..+|+.|++ ++|++|+ +|+|||++++.+.|+.. .+.. -.|+|.+|++||.+||++++
T Consensus 135 ~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~----~~~~-----~~p~l~~~~~r~~~rp~~~~ 204 (214)
T PRK15113 135 SEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVL----HGDE-----VPERLADYATFQWQRASVQR 204 (214)
T ss_pred cHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHH----cCCC-----CCHHHHHHHHHHhcCHHHHH
Confidence 355667788999999999974 5799996 99999999988877642 2221 12999999999999999998
Q ss_pred cCCC
Q 045149 96 NLPD 99 (118)
Q Consensus 96 ~~~~ 99 (118)
+...
T Consensus 205 ~~~~ 208 (214)
T PRK15113 205 WLAL 208 (214)
T ss_pred HHHH
Confidence 7643
No 52
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.03 E-value=1.1e-09 Score=67.31 Aligned_cols=67 Identities=24% Similarity=0.348 Sum_probs=52.4
Q ss_pred chHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHH
Q 045149 14 NRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIF 87 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~ 87 (118)
+...+...+.+...+..+|..|++++| +++|+|||++++.+.|..... .+... .++||+|.+|++||
T Consensus 32 ~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~--~~~~~--~~~~p~l~~w~~rm 98 (98)
T cd03205 32 QPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRH--PDLDW--RAAHPALAAWYARF 98 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHc--cCcch--hhhChHHHHHHHhC
Confidence 345667788899999999999988888 999999999999988874311 11111 35899999999986
No 53
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.99 E-value=2.5e-10 Score=81.57 Aligned_cols=91 Identities=19% Similarity=0.292 Sum_probs=73.8
Q ss_pred HHHh-hc-CchHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHH-HhcCCCCCCCCCCcHHHH
Q 045149 7 VWRM-FH-SNRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILED-IVGVQLFDPHKFPGLNAW 83 (118)
Q Consensus 7 ~~~~-~~-~~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~-~~~~~~~~~~~~p~L~~w 83 (118)
+++. |. +++.++++.+.+...|+.||..|+++.|++||++|-||+-+++.+-++..+.. +..+++-.-.+||+|..|
T Consensus 191 VYk~GFA~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~y 270 (324)
T COG0435 191 VYKAGFATTQEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGY 270 (324)
T ss_pred eeeecccchHHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHH
Confidence 3444 45 88999999999999999999999999999999999999999998876654322 233332111369999999
Q ss_pred HHHHhcCchhhhcC
Q 045149 84 FEIFKKAPVIEENL 97 (118)
Q Consensus 84 ~~r~~~~p~v~~~~ 97 (118)
...+.+.|+|.++.
T Consensus 271 Lr~LYq~pg~~~T~ 284 (324)
T COG0435 271 LRDLYQLPGFAETV 284 (324)
T ss_pred HHHHhcCccccccc
Confidence 99999999999886
No 54
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.99 E-value=8.5e-10 Score=71.20 Aligned_cols=72 Identities=14% Similarity=0.100 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHH-HhcCCCCCCCCCCcHHHHHHHHh
Q 045149 16 DQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILED-IVGVQLFDPHKFPGLNAWFEIFK 88 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~-~~~~~~~~~~~~p~L~~w~~r~~ 88 (118)
..++..+.+...++.|+..|++++||+||++|.+|+.+++++.++..... ....... ..+||||.+|.+||.
T Consensus 54 ~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~-~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 54 TLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEK-VKKYSNLLAFCRRIE 126 (126)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHH-HHhCcHHHHHHHhcC
Confidence 55667778889999999999999999999999999999988766542100 0011111 248999999999973
No 55
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=98.98 E-value=5e-09 Score=74.53 Aligned_cols=89 Identities=19% Similarity=0.236 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCC----CceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcC
Q 045149 15 RDQESRMKAILEMLQTIEEHGLR----EKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKA 90 (118)
Q Consensus 15 ~~~~~~~~~~~~~l~~le~~L~~----~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~ 90 (118)
...++...++...|+.+|..|.+ ..|++|+.+|+||+.+++++.++..+--... .....+.|||.+|+.|+..|
T Consensus 201 s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~--yw~~gsrpnle~Yf~rvrrR 278 (325)
T KOG4420|consen 201 SYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKK--YWEDGSRPNLESYFERVRRR 278 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHH--hcccCCCccHHHHHHHHHhh
Confidence 34566677788888999999865 6899999999999999999988765321111 12234789999999999999
Q ss_pred chhhhcCCChhHHHH
Q 045149 91 PVIEENLPDQDGISL 105 (118)
Q Consensus 91 p~v~~~~~~~~~~~~ 105 (118)
+++.+..++.-..+.
T Consensus 279 ~sf~kvlg~~fnilr 293 (325)
T KOG4420|consen 279 FSFRKVLGDIFNILR 293 (325)
T ss_pred hHHHHhhhhHHHHHH
Confidence 999999877654444
No 56
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.95 E-value=7.4e-10 Score=76.90 Aligned_cols=67 Identities=13% Similarity=0.198 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC-cHHHHHHHHhcCchhh
Q 045149 18 ESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFP-GLNAWFEIFKKAPVIE 94 (118)
Q Consensus 18 ~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p-~L~~w~~r~~~~p~v~ 94 (118)
++..+.+...|+.+|..|++++|++| ++|+|||++++.+.|+... + .+ .+| +|.+|++||.+++++.
T Consensus 140 ~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~----~--~~---~~p~~l~~w~~Ri~ar~~~~ 207 (209)
T TIGR02182 140 PGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLV----A--GI---NWPSRVADYLDNMSKKSKVP 207 (209)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeee----c--CC---CCChHHHHHHHHHHHHhCCC
Confidence 35567788899999999999999965 6999999999888776421 0 11 367 9999999999988764
No 57
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.95 E-value=3.6e-09 Score=69.23 Aligned_cols=73 Identities=16% Similarity=0.065 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHH-HhcCCCCCCCCCCcHHHHHHHHhc
Q 045149 16 DQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILED-IVGVQLFDPHKFPGLNAWFEIFKK 89 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~-~~~~~~~~~~~~p~L~~w~~r~~~ 89 (118)
..++..+++...+..||+.|++++||+||++|++|+.+++++..+..... ...... ...++|||.+|.+||.+
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~-~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQN-HLKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHH-HHHHCcHHHHHHHHHHH
Confidence 45667778888999999999999999999999999999887755432000 000000 12589999999999975
No 58
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.93 E-value=5.8e-09 Score=73.47 Aligned_cols=83 Identities=22% Similarity=0.321 Sum_probs=65.9
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCch
Q 045149 13 SNRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPV 92 (118)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~ 92 (118)
.....++...++...++.+|..|.++.|+.|+++|+||+.+.+.+..+.. . ... ..+..++|++.+|++++.++|+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~-~-~~~--~~~~~~~p~v~~W~~~~~~~P~ 202 (226)
T KOG0867|consen 127 NPTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQG-K-FAT--EKDFEKYPKVARWYERIQKRPA 202 (226)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhH-h-hhh--hhhhhhChHHHHHHHHHHhCcc
Confidence 34566778889999999999999999999999999999999887766531 1 111 1235699999999999999999
Q ss_pred hhhcCCC
Q 045149 93 IEENLPD 99 (118)
Q Consensus 93 v~~~~~~ 99 (118)
.++..+.
T Consensus 203 ~~e~~~~ 209 (226)
T KOG0867|consen 203 YEEANEK 209 (226)
T ss_pred HHHHHHH
Confidence 8876543
No 59
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.88 E-value=1e-08 Score=67.79 Aligned_cols=63 Identities=17% Similarity=0.197 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhhc-CCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhc
Q 045149 22 KAILEMLQTIEEHG-LREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKK 89 (118)
Q Consensus 22 ~~~~~~l~~le~~L-~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~ 89 (118)
+.+...++..-+.+ ++++|++|+++|+|||++++.+..+..+ .+.+ +..+||+|.+|++||.+
T Consensus 82 ~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~---~~~~--Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 82 EWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGH---PAFK--DMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHh---cccc--chhhCcCHHHHHHHHHH
Confidence 34444443332334 5678999999999999998887655432 1220 34589999999999986
No 60
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.77 E-value=3.1e-09 Score=75.55 Aligned_cols=86 Identities=15% Similarity=0.275 Sum_probs=68.6
Q ss_pred hc-CchHHHHHHHHHHHHHHHHHhhcCCCc--eeecCCCChHHHHHHHHHHHHHHHHH-HhcC--CCCCCCCCCcHHHHH
Q 045149 11 FH-SNRDQESRMKAILEMLQTIEEHGLREK--IFHGDKIGLLDIAFGSMLYWLQILED-IVGV--QLFDPHKFPGLNAWF 84 (118)
Q Consensus 11 ~~-~~~~~~~~~~~~~~~l~~le~~L~~~~--f~~G~~~t~aDi~~~~~~~~~~~~~~-~~~~--~~~~~~~~p~L~~w~ 84 (118)
|. +++.++...+.+.+.|+.+|+.|+++. |++|+++|.|||.+++.+-++.-+.. +..+ ..+ .++||+|..|.
T Consensus 194 FA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~i-r~~Yp~l~~~l 272 (319)
T KOG2903|consen 194 FAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTI-RDEYPNLHNWL 272 (319)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhh-hccCcHHHHHH
Confidence 44 789999999999999999999998654 88999999999999887765543322 2222 222 46899999999
Q ss_pred HHHhc-CchhhhcC
Q 045149 85 EIFKK-APVIEENL 97 (118)
Q Consensus 85 ~r~~~-~p~v~~~~ 97 (118)
+++.. .|++..+.
T Consensus 273 k~iY~~~~~~~~Tt 286 (319)
T KOG2903|consen 273 KNIYWNIPGFSSTT 286 (319)
T ss_pred HHHHhhccchhhcc
Confidence 99987 89998775
No 61
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=98.70 E-value=6.8e-08 Score=66.70 Aligned_cols=87 Identities=18% Similarity=0.293 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHhhcCC---CceeecCCCChHHHHHHHHHHHHHHHHHH-hcCCCCCCCCCCcHHHHHHHHhcCchhhh
Q 045149 20 RMKAILEMLQTIEEHGLR---EKIFHGDKIGLLDIAFGSMLYWLQILEDI-VGVQLFDPHKFPGLNAWFEIFKKAPVIEE 95 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~~---~~f~~G~~~t~aDi~~~~~~~~~~~~~~~-~~~~~~~~~~~p~L~~w~~r~~~~p~v~~ 95 (118)
..+.+...|..|++.|+. ++|+.||++|+||+.+.|-++.+...... .++++ ++.+++|.+|++.+.++.++..
T Consensus 124 ~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~I--P~~lt~V~rYl~~~ya~d~F~~ 201 (221)
T KOG1422|consen 124 LEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEI--PASLTGVWRYLKNAYARDEFTN 201 (221)
T ss_pred HHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCC--chhhhHHHHHHHHHHhHHHhhc
Confidence 334577788999999973 89999999999999999988776654443 45555 6799999999999999999999
Q ss_pred cCCChhHHHHHHH
Q 045149 96 NLPDQDGISLFFK 108 (118)
Q Consensus 96 ~~~~~~~~~~~~~ 108 (118)
+.+..+.++..+.
T Consensus 202 tcp~d~ei~~~y~ 214 (221)
T KOG1422|consen 202 TCPADQEIILAYA 214 (221)
T ss_pred CCchHHHHHHhhh
Confidence 9988776665443
No 62
>PLN02907 glutamate-tRNA ligase
Probab=98.68 E-value=4.8e-08 Score=78.72 Aligned_cols=66 Identities=15% Similarity=0.139 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCch
Q 045149 23 AILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPV 92 (118)
Q Consensus 23 ~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~ 92 (118)
.+...+..+|.+|++++||+|+++|+|||++++.+..... .+.+... .+.||+|.+|+++|.++|+
T Consensus 94 ~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~--~~~~~~~--~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 94 EFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQ--RWESLRK--SKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhh--hhhcccc--cccCHHHHHHHHHHHhCCC
Confidence 3556789999999989999999999999999877644311 1111111 3589999999999999999
No 63
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.56 E-value=2.2e-07 Score=64.65 Aligned_cols=72 Identities=24% Similarity=0.310 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhhcC--CCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhcC
Q 045149 21 MKAILEMLQTIEEHGL--REKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEENL 97 (118)
Q Consensus 21 ~~~~~~~l~~le~~L~--~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~~ 97 (118)
.......+..++..|. ++.|++||++|+||++++.++..+... ...+. .+.+|+|.++.+|+.++|.+++.+
T Consensus 125 ~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~---~~~~~--~~~~P~L~a~~~kv~~~p~ik~~i 198 (206)
T KOG1695|consen 125 LPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEEL---LDPSA--LDHFPKLKAFKERVSSIPNIKKYL 198 (206)
T ss_pred ccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHh---cCchh--hccChHHHHHHHHHhcCchHHHHH
Confidence 3355667888888885 467999999999999988777655331 11222 247899999999999999999865
No 64
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.26 E-value=2.4e-06 Score=58.03 Aligned_cols=72 Identities=18% Similarity=0.288 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHhhcC--CCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhcCCC
Q 045149 22 KAILEMLQTIEEHGL--REKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEENLPD 99 (118)
Q Consensus 22 ~~~~~~l~~le~~L~--~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~~~~ 99 (118)
.-+-..|..||+.|+ .++|-+||.+|+||+++.+.+.-..+ ++ +|.+.||.+.+..+.+.+.|+|+.+-|+
T Consensus 135 ~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~r------f~-vdl~PYPti~ri~e~l~elpaFq~ahP~ 207 (217)
T KOG0868|consen 135 HFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANR------FH-VDLTPYPTITRINEELAELPAFQAAHPD 207 (217)
T ss_pred HHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhh------cc-ccCCcCchHHHHHHHHHhCHHHHhcCCC
Confidence 446779999999995 57899999999999999988765433 21 3557899999999999999999988765
Q ss_pred h
Q 045149 100 Q 100 (118)
Q Consensus 100 ~ 100 (118)
.
T Consensus 208 n 208 (217)
T KOG0868|consen 208 N 208 (217)
T ss_pred C
Confidence 3
No 65
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=98.19 E-value=6.3e-07 Score=63.97 Aligned_cols=70 Identities=21% Similarity=0.215 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHhc
Q 045149 18 ESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQIL-EDIVGVQLFDPHKFPGLNAWFEIFKK 89 (118)
Q Consensus 18 ~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~-~~~~~~~~~~~~~~p~L~~w~~r~~~ 89 (118)
++..+.+.+-|..+++.|++++|+.||++|-+|+.+|..+..+... .... .+++ ..++|+|..|.+|+++
T Consensus 202 ~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~YP~~~~i-~d~l-e~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 202 AEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYYPFRSHI-SDLL-EGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheeccCCCcH-HHHH-hhhchHHHHHHHHHHH
Confidence 3455667888999999999999999999999999988877543211 0000 1223 3689999999999998
No 66
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=97.69 E-value=0.00012 Score=46.36 Aligned_cols=70 Identities=19% Similarity=0.151 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHhhcC-CCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcCchhhhc
Q 045149 18 ESRMKAILEMLQTIEEHGL-REKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKAPVIEEN 96 (118)
Q Consensus 18 ~~~~~~~~~~l~~le~~L~-~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~p~v~~~ 96 (118)
+++...+.+.+...+..|. +++|++|+ +|+||..+.+++.++.. .|.+ -.+.+..|.++.-++|+|++.
T Consensus 42 ~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ml~Rl~~----~gd~-----vP~~l~~Ya~~qwqrpsVQ~W 111 (117)
T PF14834_consen 42 EAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLALMLNRLVT----YGDP-----VPERLADYAERQWQRPSVQRW 111 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHHHHHHHHT----TT---------HHHHHHHHHHHT-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHHHHHHHHH----cCCC-----CCHHHHHHHHHHHCCHHHHHH
Confidence 4555666777778888886 57899987 99999999999987742 1221 246999999999999999976
Q ss_pred C
Q 045149 97 L 97 (118)
Q Consensus 97 ~ 97 (118)
+
T Consensus 112 l 112 (117)
T PF14834_consen 112 L 112 (117)
T ss_dssp H
T ss_pred H
Confidence 4
No 67
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.49 E-value=0.00026 Score=49.28 Aligned_cols=76 Identities=13% Similarity=0.184 Sum_probs=55.9
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCCcHHHHHHHHhc
Q 045149 13 SNRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLF-DPHKFPGLNAWFEIFKK 89 (118)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~-~~~~~p~L~~w~~r~~~ 89 (118)
.+...++..+++...+..|+.+|+..+||.|+.+|-+|..+|.++.-+.... ..+..+- ...+|++|.++-+|+.+
T Consensus 171 ~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~-Lpn~ela~~lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 171 DDKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTR-LPNMELANILKKYSNLLEFCRRIEQ 247 (257)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhc-CCcHHHHHHHHHhHHHHHHHHHHHH
Confidence 5677888999999999999999999999999999999999888775432210 0000000 01478888888888765
No 68
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.29 E-value=0.00052 Score=44.68 Aligned_cols=66 Identities=20% Similarity=0.333 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-CcHHHHHHHHhcCchh
Q 045149 18 ESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKF-PGLNAWFEIFKKAPVI 93 (118)
Q Consensus 18 ~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~-p~L~~w~~r~~~~p~v 93 (118)
++...++...|..+|..+.......| ++|+-||.+|++++-+.. ..|+ .| |+|.+|+++|.+.-.|
T Consensus 58 ~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Lti---vkgi------~~P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 58 PELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTI---VKGI------QWPPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCT---CTTS---------HHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhh---ccCC------cCCHHHHHHHHHHHHHcCC
Confidence 45667788888889988875554444 999999999999876632 2332 34 6999999999885444
No 69
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=97.16 E-value=0.0017 Score=47.35 Aligned_cols=64 Identities=9% Similarity=0.146 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhhc-CCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhc
Q 045149 21 MKAILEMLQTIEEHG-LREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKK 89 (118)
Q Consensus 21 ~~~~~~~l~~le~~L-~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~ 89 (118)
.+++.+..+..-..| ++++|++|+++++||+.++.++.-+..+..... .+ .--++..|+-||..
T Consensus 290 Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afkd--~~---q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 290 REHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFKD--CL---QNTSIGEWYYRMEA 354 (370)
T ss_pred HHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHHH--HH---hcchHHHHHHHHHH
Confidence 344555555444455 579999999999999999988876665543322 22 35789999999876
No 70
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.02 E-value=0.0036 Score=40.52 Aligned_cols=65 Identities=18% Similarity=0.312 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-CcHHHHHHHHhcCchh
Q 045149 19 SRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKF-PGLNAWFEIFKKAPVI 93 (118)
Q Consensus 19 ~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~-p~L~~w~~r~~~~p~v 93 (118)
+..+++...|..++..+.+... .+..+|+-||.+|++++-+.. ..|+ .| |+|.+|+++|.+.-.|
T Consensus 60 ~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~---vkgi------~~P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 60 QYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTL---VKGL------VFPPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhh---hcCC------CCCHHHHHHHHHHHHHhCC
Confidence 4456677778888888744333 456799999999999876643 2333 33 6999999999985443
No 71
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.69 E-value=0.0038 Score=45.82 Aligned_cols=70 Identities=21% Similarity=0.177 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHH---hcCCCCCCCCCCcHHHHHHHHhc
Q 045149 17 QESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDI---VGVQLFDPHKFPGLNAWFEIFKK 89 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~---~~~~~~~~~~~p~L~~w~~r~~~ 89 (118)
.++..+...+++..++..|++.+||.||++|-.|..++..+..+....-- .... + ...+||.++.+++.+
T Consensus 161 e~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~-l--~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 161 EDQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVH-L--LAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHH-H--HhcchHHHHHHHHHH
Confidence 44556677889999999999999999999999999988877553221100 0001 1 138999999999875
No 72
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=93.02 E-value=0.37 Score=32.59 Aligned_cols=36 Identities=28% Similarity=0.186 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhcCCC---ceeecCC-CChHHHHHHHHHHH
Q 045149 24 ILEMLQTIEEHGLRE---KIFHGDK-IGLLDIAFGSMLYW 59 (118)
Q Consensus 24 ~~~~l~~le~~L~~~---~f~~G~~-~t~aDi~~~~~~~~ 59 (118)
..+.+..|++.|++. .|+.|+. +|-+||.++..+..
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l 152 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLAL 152 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHH
Confidence 456788899999877 8888877 99999998776644
No 73
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=89.48 E-value=0.89 Score=31.32 Aligned_cols=65 Identities=14% Similarity=0.236 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC-cHHHHHHHHhcCchh
Q 045149 19 SRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFP-GLNAWFEIFKKAPVI 93 (118)
Q Consensus 19 ~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p-~L~~w~~r~~~~p~v 93 (118)
+..+.+...+..++..+.+.. -....++.=||.+||+++-+.. ..|+ .|| .+..|+++|.+...|
T Consensus 142 ~~~~~i~~dl~~l~~Li~~~s-~~n~~l~~ddi~vFplLRnlt~---v~gi------~wps~v~dy~~~msektqV 207 (215)
T COG2999 142 QYLKRIQADLRALDKLIVGPS-AVNGELSEDDILVFPLLRNLTL---VAGI------QWPSRVADYRDNMSEKTQV 207 (215)
T ss_pred HHHHHHHHHHHHHHHHhcCcc-hhccccchhhhhhhHHhcccee---cccC------CCcHHHHHHHHHHHHhhCc
Confidence 445667777888888876543 2345689999999998876532 2333 455 899999999885444
No 74
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=84.30 E-value=0.8 Score=36.64 Aligned_cols=59 Identities=12% Similarity=0.303 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHH
Q 045149 23 AILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFE 85 (118)
Q Consensus 23 ~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~ 85 (118)
++...+..+++.|.-..|++|.++|+||.+++..+.--........ . ...+-+|.+|++
T Consensus 92 ~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk--~--~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 92 EISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLK--A--KKDYQNVERWYD 150 (712)
T ss_pred HHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHH--h--hCCchhhhhhcC
Confidence 3445666777777767899999999999998776632100011110 0 125678888887
No 75
>COG3396 Uncharacterized conserved protein [Function unknown]
Probab=61.58 E-value=20 Score=26.12 Aligned_cols=79 Identities=13% Similarity=0.116 Sum_probs=47.1
Q ss_pred CCchhHHHHhhc--CchHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHH-HHHHHHHHHhcCCCCCCCCC
Q 045149 1 MGQGVAVWRMFH--SNRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSML-YWLQILEDIVGVQLFDPHKF 77 (118)
Q Consensus 1 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~-~~~~~~~~~~~~~~~~~~~~ 77 (118)
||||-.++++.- ..+.+++-...++..-...+. +.+.|. .+.||+.+..++ .....+ ....+...+|
T Consensus 62 ~GHg~~l~~laeel~Gk~~~d~la~~r~g~~k~n~-~~n~P~-----~~Wadt~~~~fLvD~~~~~----~l~~l~~ssy 131 (265)
T COG3396 62 MGHGWLLYRLAEELEGKGREDDLAYLRDGRHKRNS-LFNLPT-----GDWADTIVRGFLVDGAAIY----QLEALADSSY 131 (265)
T ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHhhhHHHHHH-HHcCCC-----ccHHHHHHHHHHHhHHHHH----HHHHHHhccc
Confidence 578887787766 456666666666666666665 545553 489999875544 211111 1111223578
Q ss_pred CcHHHHHHHHhc
Q 045149 78 PGLNAWFEIFKK 89 (118)
Q Consensus 78 p~L~~w~~r~~~ 89 (118)
+-|.+-..++.+
T Consensus 132 ~PlA~~a~k~~k 143 (265)
T COG3396 132 GPLARAAQKICK 143 (265)
T ss_pred hHHHHHHHHHHH
Confidence 888887777654
No 76
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=52.43 E-value=10 Score=27.01 Aligned_cols=55 Identities=11% Similarity=0.201 Sum_probs=39.5
Q ss_pred HHHHHHHHhhcCCCceeecCCCChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHhcC
Q 045149 25 LEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFKKA 90 (118)
Q Consensus 25 ~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~~~ 90 (118)
...+..++..|.+..|+.|..++-.|+.++.-+. ... ....+++..+|+..+.+.
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~----------~ep-~s~~~v~~~~w~~~l~a~ 64 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALG----------VEP-QSARLVNAERWYSKLEAL 64 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcc----------cCc-chhhhhHHHHHHHHHHHH
Confidence 4567788999999999999999999998764331 110 124678888888776553
No 77
>COG3253 ywfI Predicted heme peroxidase involved in anaerobic stress response [General function prediction only]
Probab=36.09 E-value=71 Score=22.88 Aligned_cols=33 Identities=21% Similarity=0.313 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHhhc---CCCceeecCCCChHHHH
Q 045149 20 RMKAILEMLQTIEEHG---LREKIFHGDKIGLLDIA 52 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L---~~~~f~~G~~~t~aDi~ 52 (118)
.+.++...|..-|... ..+|||.|..+.++|+.
T Consensus 191 ~~v~lv~elR~~EAr~~~~~e~pff~G~~~~~~~l~ 226 (230)
T COG3253 191 AWVDLVEELRFTEARKWIGEETPFFVGRRVPLEDLP 226 (230)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCeeeecccCHHHhh
Confidence 4456666676666663 57999999999999986
No 78
>PF07182 DUF1402: Protein of unknown function (DUF1402); InterPro: IPR009842 This family consists of several hypothetical bacterial proteins of around 310 residues in length. Members of this family seem to be found exclusively in Agrobacterium, Rhizobium and Brucella species. The function of this family is unknown.
Probab=31.63 E-value=74 Score=23.36 Aligned_cols=22 Identities=23% Similarity=0.277 Sum_probs=15.6
Q ss_pred ceeecCCCChHHHHHHHHHHHH
Q 045149 39 KIFHGDKIGLLDIAFGSMLYWL 60 (118)
Q Consensus 39 ~f~~G~~~t~aDi~~~~~~~~~ 60 (118)
||+.|..|++.-|-=...+.-.
T Consensus 173 PfyAGQTFGLGQinPLTAL~~t 194 (303)
T PF07182_consen 173 PFYAGQTFGLGQINPLTALMMT 194 (303)
T ss_pred cccccccccccccChhHHHHHH
Confidence 7899999999888544444433
No 79
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=26.28 E-value=44 Score=21.99 Aligned_cols=17 Identities=24% Similarity=0.636 Sum_probs=14.2
Q ss_pred CcHHHHHHHHhcCchhh
Q 045149 78 PGLNAWFEIFKKAPVIE 94 (118)
Q Consensus 78 p~L~~w~~r~~~~p~v~ 94 (118)
-.|++|++|+..+|...
T Consensus 112 ~~LqrfL~RV~~hP~L~ 128 (140)
T cd06891 112 ANLQRWFNRVCSDPILI 128 (140)
T ss_pred HHHHHHHHHHhCChhhc
Confidence 46889999999999655
No 80
>PF10414 CysG_dimeriser: Sirohaem synthase dimerisation region; InterPro: IPR019478 Bacterial sulphur metabolism depends on the iron-containing porphinoid sirohaem. CysG is a multi-functional enzyme with S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase, dehydrogenase and ferrochelatase activities. CysG synthesizes sirohaem from uroporphyrinogen III via reactions which encompass two branchpoint intermediates in tetrapyrrole biosynthesis, diverting flux first from protoporphyrin IX biosynthesis and then from cobalamin (vitamin B12) biosynthesis. CysG is a dimer. Its dimerisation region is 74 residues long, and acts to hold the two structurally similar protomers held together asymmetrically through a number of salt-bridges across complementary residues within the dimerisation region []. CysG dimerisation produces a series of active sites, accounting for CysG's multi-functionality, catalysing four diverse reactions: Two SAM-dependent methylations NAD+-dependent tetrapyrrole dehydrogenation Metal chelation ; GO: 0006779 porphyrin-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1PJT_A 1PJS_A 1PJQ_A.
Probab=25.07 E-value=1.2e+02 Score=16.34 Aligned_cols=9 Identities=22% Similarity=0.456 Sum_probs=3.6
Q ss_pred HHHHHHHhc
Q 045149 81 NAWFEIFKK 89 (118)
Q Consensus 81 ~~w~~r~~~ 89 (118)
..+++++.+
T Consensus 28 R~FWe~~~~ 36 (60)
T PF10414_consen 28 RRFWERFFD 36 (60)
T ss_dssp HHHHHHHT-
T ss_pred HHHHHHHHc
Confidence 344444443
No 81
>PF08020 DUF1706: Protein of unknown function (DUF1706) ; InterPro: IPR012550 This family contains many hypothetical proteins from bacteria and yeast.
Probab=24.76 E-value=2.3e+02 Score=19.12 Aligned_cols=28 Identities=14% Similarity=0.145 Sum_probs=18.2
Q ss_pred CCcee-ecCCCChHHHHHHHHHHHHHHHHH
Q 045149 37 REKIF-HGDKIGLLDIAFGSMLYWLQILED 65 (118)
Q Consensus 37 ~~~f~-~G~~~t~aDi~~~~~~~~~~~~~~ 65 (118)
+.++. +|..-|++|+++. .+.|...+-.
T Consensus 34 ~~~~~~~~~d~~~~DvLay-l~gW~~LlL~ 62 (166)
T PF08020_consen 34 DTPFDFGGRDRNPRDVLAY-LYGWHELLLK 62 (166)
T ss_pred cCccccccccCCHHHHHHH-HHHHHHHHHH
Confidence 44554 3677999999876 5566554433
No 82
>PRK15371 effector protein YopJ; Provisional
Probab=23.85 E-value=1.1e+02 Score=22.69 Aligned_cols=37 Identities=8% Similarity=0.108 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHH
Q 045149 20 RMKAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSML 57 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~ 57 (118)
..+++...+..||..+.++.|+ .+.++..||-..+.+
T Consensus 24 ~~~~L~~~i~~le~~~~~G~~~-~~~~~~~Di~~lp~l 60 (287)
T PRK15371 24 SNEELKNIITQLEDDIADGSWI-HKNYARTDLEVMPAL 60 (287)
T ss_pred hHHHHHHHHHHHHHHHHcCCCC-CchhHHhhHHhhHHH
Confidence 4467888999999999888777 667899999877765
No 83
>PF03421 YopJ: YopJ Serine/Threonine acetyltransferase; InterPro: IPR005083 The infection of mammalian host cells by Yersinia sp. causes a rapid induction of the mitogen-activated protein kinase (MAPK; including the ERK, JNK and p38 pathways) and nuclear factor kappaB (NF-kappaB) signalling pathways that would typically result in cytokine production and initiation of the innate immune response. However, these pathways are rapidly inhibited promoting apoptosis. YopJ has been shown to block phosphorylation of active site residues []. It has also been shown that YopJ acetyltransferase is activated by eukaryotic host cell inositol hexakisphosphate []. Serine and threonine acetylation is yet another complication to the control of signalling pathways and may be a may be a widespread mode of biochemical regulation of endogenous processes in eukaryotic cells. It has been shown that YopJ is a serine/threonine acetyltransferase []. It acetylates the serine and threonine residues in the phosphorylation sites of MAPK kinases and nuclear factor kappaB, preventing their activation by phosphorylation and the inhibition of these signalling pathways []. This entry contains YopJ and related proteins.
Probab=21.74 E-value=1.2e+02 Score=20.59 Aligned_cols=36 Identities=17% Similarity=0.186 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhhcCCCceeecCCCChHHHHHHHHHH
Q 045149 22 KAILEMLQTIEEHGLREKIFHGDKIGLLDIAFGSMLY 58 (118)
Q Consensus 22 ~~~~~~l~~le~~L~~~~f~~G~~~t~aDi~~~~~~~ 58 (118)
+.+......+++.+.++.|+ ...++-.|+...|.+-
T Consensus 2 ~~L~~y~~~~~~~~~~g~~~-~~~~~~~D~~~lp~lv 37 (177)
T PF03421_consen 2 ESLKEYIERLEDDIKNGSWP-NESYAELDIKMLPALV 37 (177)
T ss_pred hHHHHHHHHHHHHHHhCCCC-CcchhhhhHHHHHHHH
Confidence 35677788888899888887 7889999999877663
No 84
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=21.62 E-value=69 Score=20.48 Aligned_cols=33 Identities=12% Similarity=0.248 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC-CceeecCCCCh
Q 045149 16 DQESRMKAILEMLQTIEEHGLR-EKIFHGDKIGL 48 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~-~~f~~G~~~t~ 48 (118)
..++...++...|+.+|..|.+ ..|+.++.+++
T Consensus 81 ~~~~~l~~~~~~~~~~e~Rl~~mE~yVTS~~f~l 114 (121)
T TIGR02978 81 SPRQALREVKREFRDLERRLRNMERYVTSDTFRL 114 (121)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccH
Confidence 4455666777777777777754 34666665554
No 85
>COG1826 TatA Sec-independent protein secretion pathway components [Intracellular trafficking and secretion]
Probab=21.58 E-value=1.7e+02 Score=17.59 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=21.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHh
Q 045149 46 IGLLDIAFGSMLYWLQILEDIVGVQLFDPHKFPGLNAWFEIFK 88 (118)
Q Consensus 46 ~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~~p~L~~w~~r~~ 88 (118)
++..++.++.++--+ +|.+.+.|.+.+++.+..
T Consensus 4 ig~~elliIlvV~ll----------lfGpkKLP~l~r~~G~~i 36 (94)
T COG1826 4 IGWSELLIILVVALL----------VFGPKKLPEAGRDLGKAI 36 (94)
T ss_pred CCHHHHHHHHHHHHH----------hcCcchhHHHHHHHHHHH
Confidence 677777765443222 245678999888877643
No 86
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=21.02 E-value=1.4e+02 Score=15.32 Aligned_cols=31 Identities=23% Similarity=0.447 Sum_probs=21.7
Q ss_pred CcHHHHHHHHhcCchhhhcC---CChhHHHHHHH
Q 045149 78 PGLNAWFEIFKKAPVIEENL---PDQDGISLFFK 108 (118)
Q Consensus 78 p~L~~w~~r~~~~p~v~~~~---~~~~~~~~~~~ 108 (118)
..|.++++++.+.|.++.-+ .+.+.++...+
T Consensus 4 ~~l~~Fl~~~~~d~~l~~~l~~~~~~~e~~~lA~ 37 (49)
T PF07862_consen 4 ESLKAFLEKVKSDPELREQLKACQNPEEVVALAR 37 (49)
T ss_pred HHHHHHHHHHhcCHHHHHHHHhcCCHHHHHHHHH
Confidence 45788899999888888633 35566665544
No 87
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins.
Probab=20.78 E-value=2.1e+02 Score=19.44 Aligned_cols=20 Identities=15% Similarity=0.213 Sum_probs=15.9
Q ss_pred Cce-eecCCCChHHHHHHHHH
Q 045149 38 EKI-FHGDKIGLLDIAFGSML 57 (118)
Q Consensus 38 ~~f-~~G~~~t~aDi~~~~~~ 57 (118)
+++ ++.++.|..|+.+...+
T Consensus 22 ~~~i~v~NH~S~lD~~~l~~~ 42 (205)
T cd07993 22 HPVVLLPTHRSYLDFLLLSFI 42 (205)
T ss_pred CCEEEEecCcchhHHHHHHHH
Confidence 666 58899999999876544
No 88
>PHA01817 hypothetical protein
Probab=20.48 E-value=82 Score=23.69 Aligned_cols=45 Identities=16% Similarity=0.105 Sum_probs=24.9
Q ss_pred hHHHHhhc-CchHHHHHHHHHHHHHHHHHhhcCCCceeecCCCChH
Q 045149 5 VAVWRMFH-SNRDQESRMKAILEMLQTIEEHGLREKIFHGDKIGLL 49 (118)
Q Consensus 5 ~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~f~~G~~~t~a 49 (118)
..+..+|. .....++..++++..|..=-..+.+.+||..|-+|+-
T Consensus 210 dsgssllalakqamqellkkvqdalqwdvhsigsdkffsndyftlq 255 (479)
T PHA01817 210 DSGSSLLALAKQAMQELLKKVQDALQWDVHSIGSDKFFSNDYFTLQ 255 (479)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhhhcchhccccccccccchhhhh
Confidence 33444444 3344444445555555544444556678888888774
No 89
>COG2879 Uncharacterized small protein [Function unknown]
Probab=20.22 E-value=1.4e+02 Score=16.90 Aligned_cols=17 Identities=24% Similarity=0.503 Sum_probs=9.4
Q ss_pred CCCcHHHHHHHHhc-Cch
Q 045149 76 KFPGLNAWFEIFKK-APV 92 (118)
Q Consensus 76 ~~p~L~~w~~r~~~-~p~ 92 (118)
.-|.-..|.+-|.+ +|.
T Consensus 21 GvpdYdnYVehmr~~hPd 38 (65)
T COG2879 21 GVPDYDNYVEHMRKKHPD 38 (65)
T ss_pred CCCcHHHHHHHHHHhCcC
Confidence 34555566666664 443
No 90
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=20.19 E-value=65 Score=20.55 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC-CceeecCCCCh
Q 045149 16 DQESRMKAILEMLQTIEEHGLR-EKIFHGDKIGL 48 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~-~~f~~G~~~t~ 48 (118)
...+..+.+...|+.+|..|.+ ..|+.++++++
T Consensus 78 s~~~~l~~~~~~~~~~e~Rlr~mE~yVTS~~f~l 111 (118)
T PRK10697 78 SSSELLDEVDRELAAGEQRLREMERYVTSDTFTL 111 (118)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCH
Confidence 4556677777788888877754 44666666654
Done!