Your job contains 1 sequence.
>045155
MTVVQTLMDRLRPLVGLKGWDYCVLWKLSDDQRFIAWIDCCCAGIEGTQNDDGDELHFPV
SPFLPCRDVIFPHPRTKSCELLSQLPSSMPLDSGIYAQSLISNQPRWLNFSNSADLEVME
ETLWTRVLIPIMGGLIELFATKEVSEDPHVIDFIIAQCNISMEQDPMNMNTSCYLDNASS
SVNVHAMALENSDVPYDLSVDRIRICSGCTSPVNFLQQFGYSSSSKNVKRHRNDMFFEGS
RDDSTHQNGIQEMDNASNMNMQFMEPNMGNKELQQGNYDDLNKDLIKPDQNNNNNNNGRS
DSISDCSDQIDDLEDDVKYRPRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKL
DRATILVDAIEYVKQLQKQEKELKEELEENSDDDGAAKNDDMGISVNNHNAVKSESLTQN
GTNFGPKTEPKQCHMGNGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPG
GFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNVKKRDNEMVQADHVRDSLLELTRNPAR
EWIENVAKASDSTVNNGINYHHHEQHLHSHHMSTHHHHLHHN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045155
(582 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 863 2.6e-86 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 409 8.1e-66 3
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 264 1.2e-38 3
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 160 1.7e-16 2
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 163 3.0e-14 2
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 128 1.3e-13 4
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 147 5.0e-13 4
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 122 6.7e-13 2
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 143 1.2e-12 4
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 138 1.9e-12 2
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 150 3.7e-11 2
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 156 5.4e-11 2
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 152 9.6e-11 3
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 147 1.0e-10 4
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 143 1.1e-10 4
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 149 1.7e-10 2
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 124 3.1e-10 3
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 128 4.6e-10 4
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 138 5.4e-10 3
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 138 8.2e-10 3
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 165 1.5e-09 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 142 2.5e-09 2
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 113 3.5e-09 2
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 143 6.5e-09 4
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 149 1.7e-08 2
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 126 2.0e-08 2
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 127 8.2e-08 2
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 121 9.3e-08 2
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 144 1.7e-07 2
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 100 2.4e-07 3
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 143 3.5e-07 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 118 3.7e-07 2
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 146 4.4e-07 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 103 1.7e-06 4
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 95 2.8e-06 3
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 96 1.0e-05 2
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 103 1.1e-05 2
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 117 1.2e-05 2
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 90 1.8e-05 2
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 118 2.1e-05 2
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 114 2.5e-05 2
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 123 7.4e-05 2
UNIPROTKB|Q6YTU1 - symbol:P0419H09.4 "cDNA clone:002-131-... 124 0.00011 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 122 0.00012 2
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 103 0.00013 2
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 84 0.00019 2
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 103 0.00021 2
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 105 0.00025 2
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 118 0.00075 1
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 213/502 (42%), Positives = 292/502 (58%)
Query: 66 CRDVIFPHPRTKSCELLSQLPSSMPLDSGIYAQSLISNQPRWLNFSNSADLEVMEETLWT 125
CRDV+F HPRTKSCE LS LP+S+PLDSGIYA++L++NQ WL S S++ M+ET+ T
Sbjct: 62 CRDVMFHHPRTKSCEFLSHLPASIPLDSGIYAETLLTNQTGWL--SESSEPSFMQETICT 119
Query: 126 RVLIPIMGGLIELFATKEVSEDPHVIDFIIAQCNISMEQD-PMNMNTSCYLDNASSSVNV 184
RVLIPI GGL+ELFAT+ V+ED +V+DF++ CN+ M+ +NM + +++ +
Sbjct: 120 RVLIPIPGGLVELFATRHVAEDQNVVDFVMGHCNMLMDDSVTINMMVADEVESKPYGMLS 179
Query: 185 HAMALENSDVPYDLSVDRIRICSGCTSPVNFLQQFG-YSSSSKNVKR--HRNDMFFEGSR 241
+ + S +++ S +NFL Q Y + +K H + +
Sbjct: 180 GDIQQKGSKEEDMMNLPSSYDISADQIRLNFLPQMSDYETQHLKMKSDYHHQALGYL-PE 238
Query: 242 DDSTHQNGIQEMDNASNMNMQFM-EPNMGNKELQQGNYDDLNKDLIKPDQXXXXXXXGRX 300
+ + G+ + + + EP++ E Q N D+N++ GR
Sbjct: 239 NGNKEMMGMNPFNTVEEDGIPVIGEPSLLVNEQQVVNDKDMNEN-------------GRV 285
Query: 301 XXXXXXXXXXXXLEDDVKYRPRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKL 360
EDD KY+ +++GK Q+KNL+AER+RRKKLNDRLYALR+LVP ITKL
Sbjct: 286 DSGSDCSDQIDD-EDDPKYK-KKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKL 343
Query: 361 DRATILVDAIEYVXXXXXXXXXXXXXXXXNSDDDGAAKNDDMGISVNNHNAVKSESLTQN 420
DRA+IL DAI YV NS+ + + G+S+N V
Sbjct: 344 DRASILGDAINYVKELQNEAKELQDELEENSETEDGSNRPQGGMSLNG-TVV-------- 394
Query: 421 GTNFGPKTEPKQCHMG-NGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKP 479
T F P C+ KQD D N+ DKGQ+ME QV+VAQL+G EFF+KV CE+KP
Sbjct: 395 -TGFHPGLS---CNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVICEYKP 450
Query: 480 GGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNVKKRDNEMVQADHVRDSLLELTRNPA 539
GGF RLMEAL+SLGLEVTNAN T LVSNVF V+K DNEMVQA+HVR+SLLE+TRN +
Sbjct: 451 GGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEKNDNEMVQAEHVRNSLLEITRNTS 510
Query: 540 REWIEN-VAKASDSTVNNGINY 560
R W ++ +A S N ++Y
Sbjct: 511 RGWQDDQMATGSMQNEKNEVDY 532
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 113/294 (38%), Positives = 173/294 (58%)
Query: 4 VQTLMDRLRPLVGLKGWDYCVLWKLSDDQRFIAWIDCCCAGIEGTQNDDGDELHFPVSPF 63
+Q L+++LRPLVG + WDYCVLW+L++DQRF+ W+ CCC G E + +E +
Sbjct: 5 MQNLLEKLRPLVGARAWDYCVLWRLNEDQRFVKWMGCCCGGTELIAENGTEEFSYG---- 60
Query: 64 LPCRDVIFPHPRTKSCELLSQLPSSMPLDSGIYAQSLISNQPRWLNFSNSADLEVMEETL 123
CRDV+F HPRTKSCE LS LP+S+PLDSGIYA++L++NQ WL S S++ M+ET+
Sbjct: 61 -GCRDVMFHHPRTKSCEFLSHLPASIPLDSGIYAETLLTNQTGWL--SESSEPSFMQETI 117
Query: 124 WTRVLIPIMGGLIELFATKEVSEDPHVIDFIIAQCNISMEQD-PMNMNTSCYLDN---AS 179
TRVLIPI GGL+ELFAT+ V+ED +V+DF++ CN+ M+ +NM + +++
Sbjct: 118 CTRVLIPIPGGLVELFATRHVAEDQNVVDFVMGHCNMLMDDSVTINMMVADEVESKPYGM 177
Query: 180 SSVNVHAMALENSDV---P--YDLSVDRIRICSGCTSPVNFLQQFG-YSSSSKNVKR--H 231
S ++ + D+ P YD+S D+IR+ NFL Q Y + +K H
Sbjct: 178 LSGDIQQKGSKEEDMMNLPSSYDISADQIRL--------NFLPQMSDYETQHLKMKSDYH 229
Query: 232 RNDMFFEGSRDDSTHQNGIQEMDNASNMNMQFM-EPNMGNKELQQGNYDDLNKD 284
+ + + + G+ + + + EP++ E Q N D+N++
Sbjct: 230 HQALGYL-PENGNKEMMGMNPFNTVEEDGIPVIGEPSLLVNEQQVVNDKDMNEN 282
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 409 (149.0 bits), Expect = 8.1e-66, Sum P(3) = 8.1e-66
Identities = 107/233 (45%), Positives = 135/233 (57%)
Query: 314 EDDVKYRPRRNG-KEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEY 372
EDD R G K Q KNL AERKRRKKLN LY LR+LVP ITK+DRA+IL DAI+Y
Sbjct: 267 EDDGDGEGRSGGAKRQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDY 326
Query: 373 VXXXXXXXXXXXXXXXXNSDDDGAAKNDDMGIS-VNNHNAVKSESLTQNGTNFGPKTEPK 431
+ D+ K D+ I + V ++ + N + P
Sbjct: 327 IVGLQKQVKELQDEL---EDNHVHHKPPDVLIDHPPPASLVGLDNDDASPPNSHQQQPPL 383
Query: 432 QCHMGNGRKQDQDSGNTIDK-------GQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVR 484
+ R+ ++D T DK G +ME Q+EV Q+ GNE F++V EHKPGGFVR
Sbjct: 384 AVSGSSSRRSNKDPAMTDDKVGGGGGGGHRMEPQLEVRQVQGNELFVQVLWEHKPGGFVR 443
Query: 485 LMEALNSLGLEVTNANVTSRTGLVSNVFNVKKRDNEM-VQADHVRDSLLELTR 536
LM+A+N+LGLEV N NVT+ LV NVF V RD+E+ VQAD VRDSLLE+TR
Sbjct: 444 LMDAMNALGLEVINVNVTTYKTLVLNVFRVMVRDSEVAVQADRVRDSLLEVTR 496
Score = 165 (63.1 bits), Expect = 8.1e-66, Sum P(3) = 8.1e-66
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 82 LSQLPSSMPLDS---GIYAQSLISNQPRWLNFSNSADLEVMEETLWTRVLIPIMGGLIEL 138
L LPSS+PLDS G++AQ+L+SNQP W + S + + TR+L+P+ GGL+EL
Sbjct: 74 LLDLPSSIPLDSSSIGMHAQALLSNQPIWQSSSEEEEADGGGGAK-TRLLVPVAGGLVEL 132
Query: 139 FATKEVSEDPHVIDFIIAQC 158
FA++ ++E+ + + ++AQC
Sbjct: 133 FASRYMAEEQQMAELVMAQC 152
Score = 126 (49.4 bits), Expect = 8.1e-66, Sum P(3) = 8.1e-66
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 6 TLMDR-LRPLVGLKGWDYCVLWKLSDDQRFIAWIDCCCA 43
T +D LRPLVG GWDYC+ W+LS DQRF+ CC+
Sbjct: 26 TSLDAALRPLVGSDGWDYCIYWRLSPDQRFLEMTGFCCS 64
Score = 40 (19.1 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 144 VSEDPHVIDFIIAQCNISMEQDP---MNMNTSCYLDNASSSVNVHAMAL 189
+S D ++ C+ +E +++ +S LD SSS+ +HA AL
Sbjct: 49 LSPDQRFLEMTGFCCSSELEAQVSALLDLPSSIPLD--SSSIGMHAQAL 95
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 264 (98.0 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 63/164 (38%), Positives = 89/164 (54%)
Query: 11 LRPLVGLKGWDYCVLWKLSDD-QRFIAWIDCCCAG------IEGTQNDDGDELHFPVSPF 63
LRP V + WD CV+WKL DD RFI W+ CCC+G I+ +++G + F
Sbjct: 14 LRPFVDSRTWDLCVIWKLGDDPSRFIEWVGCCCSGCYIDKNIKLENSEEGGTGRKKKASF 73
Query: 64 LPCRDVIFPHP-RTKSCELLSQLPSSMPLDSGIYAQSLISNQPRWLNFSNSADLEVMEET 122
CRD H RT +CE LS+ P MPL GI+ + ++S P+WL S S +E+
Sbjct: 74 --CRDDHNKHRIRTLACEALSRFPLFMPLYPGIHGEVVMSKSPKWLVNSGSK-MEMFS-- 128
Query: 123 LWTRVLIPIMGGLIELFATKEVSEDPHVIDFIIAQCNISMEQDP 166
TRVL+P+ GL+ELFA D ++ I+++C E P
Sbjct: 129 --TRVLVPVSDGLVELFAFDMRPFDESMVHLIMSRCTTFFEPFP 170
Score = 131 (51.2 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 318 KYRPRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
K P N K SKNL +ERKRR+++N +Y LRA+VP ITKL++ I DA++Y+
Sbjct: 254 KLLPTENFK---SKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYI 306
Score = 119 (46.9 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 456 EVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNVK 515
EV++EV + +F I+V EHK GF RL+EA++ LE+ + N T V V NVK
Sbjct: 359 EVKIEVHETGERDFLIRVVQEHKQDGFKRLIEAVDLCELEIIDVNFTRLDLTVMTVLNVK 418
Query: 516 KRDNEMVQADHVRDSLLEL 534
+ + + +RD LL++
Sbjct: 419 A-NKDGIACGILRDLLLKM 436
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 160 (61.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 31/44 (70%), Positives = 41/44 (93%)
Query: 330 SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
+KNL+AER+RRKKLNDRLY LR++VP I+K+DRA+IL DAI+Y+
Sbjct: 306 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYL 349
Score = 122 (48.0 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 36/133 (27%), Positives = 67/133 (50%)
Query: 406 VNN-HNAVKSE---SLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTIDKGQQMEVQVEV 461
+N+ HN ++S SL ++F P T Q +++ S KGQQ V+V +
Sbjct: 356 INDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRL 415
Query: 462 AQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNVKK-RDNE 520
+ G I +FC +PG + M+AL++LGL+V A ++ G +VF ++ ++ +
Sbjct: 416 RE--GRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQ 473
Query: 521 MVQADHVRDSLLE 533
+ D ++ L +
Sbjct: 474 EILPDQIKAVLFD 486
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 163 (62.4 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 32/44 (72%), Positives = 41/44 (93%)
Query: 330 SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
+KNL+AER+RRKKLNDRLY LR++VP I+K+DRA+IL DAIEY+
Sbjct: 335 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYL 378
Score = 98 (39.6 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 29/121 (23%), Positives = 55/121 (45%)
Query: 414 SESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKV 473
+ SL T+F P T +++ S GQQ V+V + + G I +
Sbjct: 398 TSSLPPTPTSFHPLTPTLPTLPSRIKEEICPSALPSPTGQQPRVEVRLRE--GRAVNIHM 455
Query: 474 FCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNVKK-RDNEMVQADHVRDSLL 532
FC +PG + M A+ LGL+V A ++ G ++F ++ +D + + ++ L+
Sbjct: 456 FCARRPGLLLSAMRAVEGLGLDVQQAVISCFNGFTLDIFKAEQCKDGPGLLPEEIKAVLM 515
Query: 533 E 533
+
Sbjct: 516 Q 516
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 128 (50.1 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 313 LEDDVKYRPRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEY 372
L D+ K +R +E S ++VAER+RR+KLN++ LR++VP +TK+D+ +IL D I Y
Sbjct: 348 LHDNTK--DKRLPREDLS-HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAY 404
Query: 373 V 373
V
Sbjct: 405 V 405
Score = 84 (34.6 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 31/128 (24%), Positives = 59/128 (46%)
Query: 88 SMPLDSGIYAQSLISNQPRWLNFSNSADLEVMEETLWTR-------VLIPIMGGLIELFA 140
S P SG+ ++ + WL+ +N D + + + V IP++ G++EL
Sbjct: 124 SFPPPSGMPGKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGT 183
Query: 141 TKEVSEDPHVIDFIIAQCNISMEQDPMNMNTSCYLDNASSSVNVHAMALENSDVPYDLSV 200
TK+V ED ++F+ + S D N L S+ VH A + +V ++++
Sbjct: 184 TKKVRED---VEFV--ELTKSFFYDHCKTNPKPALSE-HSTYEVHEEAEDEEEVEEEMTM 237
Query: 201 -DRIRICS 207
+ +R+ S
Sbjct: 238 SEEMRLGS 245
Score = 69 (29.3 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 16/67 (23%), Positives = 35/67 (52%)
Query: 431 KQCHMGNGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALN 490
K+ H +Q T ++ +VEV+ + N+ +++ CE++ G + +++ L+
Sbjct: 410 KRVHELENTHHEQQHKRTRTCKRKTSEEVEVSIIE-NDVLLEMRCEYRDGLLLDILQVLH 468
Query: 491 SLGLEVT 497
LG+E T
Sbjct: 469 ELGIETT 475
Score = 54 (24.1 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 7 LMDRLRPLVGLKGWDYCVLWKLSDDQRFIAW 37
L L+ V W Y V W+ QR + W
Sbjct: 20 LQGLLKTAVQSVDWTYSVFWQFCPQQRVLVW 50
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 147 (56.8 bits), Expect = 5.0e-13, Sum P(4) = 5.0e-13
Identities = 29/64 (45%), Positives = 47/64 (73%)
Query: 316 DVKYRPRRNGKEPQS------KNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDA 369
+ + RPR+ G++P + ++ AER+RR+KLN R YALRA+VP ++K+D+A++L DA
Sbjct: 503 EAEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDA 562
Query: 370 IEYV 373
I Y+
Sbjct: 563 ISYI 566
Score = 71 (30.1 bits), Expect = 5.0e-13, Sum P(4) = 5.0e-13
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 445 SGNTIDKGQQME-VQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVT 502
SG D G + V++E A++ G E I+V C + RLM AL L L+V +A+V+
Sbjct: 602 SGGGGDGGARCHAVEIE-AKILGLEAMIRVQCHKRNHPAARLMTALRELDLDVYHASVS 659
Score = 70 (29.7 bits), Expect = 5.0e-13, Sum P(4) = 5.0e-13
Identities = 37/150 (24%), Positives = 64/150 (42%)
Query: 82 LSQLPSSMPLDSGIYAQSLISNQPRWLNFS-NSADLEVMEET----LWTRVLIPIMGGLI 136
L + S P G+ Q+L + QP W+ +SA + + L T V +P+ G++
Sbjct: 167 LVSMTQSFPNGLGLPGQALFAAQPTWIATGLSSAPCDRARQAYTFGLRTMVCLPLATGVL 226
Query: 137 ELFATKEVSEDPHVIDFIIAQCNISMEQDPMNMNTSCYLDNASSSVNVHAMA-LENSDVP 195
EL +T + + I I A N+S + + D AS+ +V +A D+
Sbjct: 227 ELGSTDVIFQTGDSIPRIRALFNLSAAAAS---SWPPHPDAASADPSVLWLADAPPMDMK 283
Query: 196 YDLSVDRIRICSGCTSPVNFLQQFGYSSSS 225
+S I + P + +Q F S+S
Sbjct: 284 DSISAADISVSKPPPPPPHQIQHFENGSTS 313
Score = 46 (21.3 bits), Expect = 5.0e-13, Sum P(4) = 5.0e-13
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 6 TLMDRLRPLV-GLKG-WDYCVLWKLSDD 31
TL RL+ ++ G + W Y + W+ S D
Sbjct: 67 TLQQRLQSIIEGSRETWTYAIFWQSSID 94
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 122 (48.0 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 329 QSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
+S NL AER+RR+KL+ RL ALR+ VPI+T + +A+I+ DAI Y+
Sbjct: 30 KSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYI 74
Score = 111 (44.1 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 22/85 (25%), Positives = 47/85 (55%)
Query: 455 MEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNV 514
+E V++ ++ +F++K+ E + G F + ME + LG E+ + ++T+ G + + +
Sbjct: 125 IEENVQLCKIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAI--LISA 182
Query: 515 KKRDNEMVQADHVRDSLLELTR-NP 538
+ E+ + +D LLE+ R NP
Sbjct: 183 SVQTQELCDVEQTKDFLLEVMRSNP 207
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 143 (55.4 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 27/54 (50%), Positives = 41/54 (75%)
Query: 320 RPRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
R NG+E ++ AER+RR+KLN R Y+LRA+VP ++K+D+A++L DAI Y+
Sbjct: 404 RKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYI 457
Score = 87 (35.7 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 431 KQCHMGNG---RKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLME 487
K+ + G G R +++ S N +E++++V ++ G + I+V C K R ME
Sbjct: 483 KEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDV-KIIGWDVMIRVQCGKKDHPGARFME 541
Query: 488 ALNSLGLEVTNANVTSRTGLVSNVFNVKKRDNEMVQADHVRDSLL 532
AL L LEV +A+++ L+ VK ++ D ++ +L+
Sbjct: 542 ALKELDLEVNHASLSVVNDLMIQQATVKM-GSQFFNHDQLKVALM 585
Score = 58 (25.5 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 6 TLMDRLRPLVGLKG--WDYCVLWKLSDD 31
TL RL+ L+ G W Y + W++S D
Sbjct: 51 TLQQRLQALIESAGENWTYAIFWQISHD 78
Score = 39 (18.8 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 94 GIYAQSLISNQPRWLNFSNSADLEVMEET-------LWTRVLIPIMGGLIELFATKEVSE 146
G+ +S ++++ WL+ S + E L T V I G++EL +++ +S+
Sbjct: 164 GLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGSSEVISQ 223
Score = 39 (18.8 bits), Expect = 6.3e-08, Sum P(4) = 6.3e-08
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 402 MGISVNNHNAVKSESLTQNGTNF 424
MG NH+ +K +T+ G N+
Sbjct: 570 MGSQFFNHDQLKVALMTKVGENY 592
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 138 (53.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 325 GKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
GKE +SKNL AER+RR +LN ++ALRA+VP ITK+ + L DAIE++
Sbjct: 59 GKEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHI 107
Score = 91 (37.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 22/80 (27%), Positives = 45/80 (56%)
Query: 458 QVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNVK-- 515
QVE+ L +++ +K+F + G F +++EAL S ++V + N S G + F ++
Sbjct: 152 QVELISLGSSKYNLKIFWTKRAGLFTKVLEALCSYKVQVLSLNTISFYGYAESFFTIEVK 211
Query: 516 -KRDNEMVQADHVRDSLLEL 534
++D MV+ + S++E+
Sbjct: 212 GEQDVVMVELRSLLSSIVEV 231
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 150 (57.9 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 27/44 (61%), Positives = 40/44 (90%)
Query: 330 SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
+KN++ ER RR+KLN++LYALR++VP ITK+D+A+I+ DAIEY+
Sbjct: 92 NKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYI 135
Score = 73 (30.8 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 455 MEVQ-VEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFN 513
+E+Q + V+++ + V C + R+ AL L L V AN+TS G +
Sbjct: 217 VEIQELRVSEVGDRVLVVSVTCSKRRDAMARVCRALEELRLRVITANITSVAGCPMHTLF 276
Query: 514 VKKRDNEMVQADHVRDSLL 532
V+ + VQ + ++ L
Sbjct: 277 VEVDHMDSVQMKQMVEAAL 295
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 156 (60.0 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 320 RPRRNGK-EPQ-SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
+ R N K E Q SKNL+AER+RRK+LNDRL LR++VP ITK+DR +IL DAI+Y+
Sbjct: 138 KKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYM 193
Score = 65 (27.9 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 457 VQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVT--SRTGLVSNVFNV 514
++ EV Q N I + C KPG V + L +LGLE+ ++ S L ++ F V
Sbjct: 230 LKFEVDQREVNTH-IDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEV 288
Query: 515 KKRDNEMVQADHVRDSLL 532
++ MV ++ + +L+
Sbjct: 289 GEQ-RYMVTSEATKQALI 305
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 152 (58.6 bits), Expect = 9.6e-11, Sum P(3) = 9.6e-11
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 313 LEDDVKYRPR----RNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVD 368
L D+ K R R NG+E ++ AER+RR+KLN R YALRA+VP I+K+D+A++L D
Sbjct: 298 LTDEQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLAD 357
Query: 369 AIEYV 373
AI Y+
Sbjct: 358 AITYI 362
Score = 58 (25.5 bits), Expect = 9.6e-11, Sum P(3) = 9.6e-11
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 82 LSQLPSSMPLDSGIY--AQSLISNQPRW-------LNFSNSADLEVMEETLWTRVLIPIM 132
L+ L S D+ Y A + +S +P W L++ T + +P+
Sbjct: 141 LASLYFSFRCDTNKYGPAGTYVSGKPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVN 200
Query: 133 GGLIELFATKEVSEDPHVIDFI 154
G++EL + + + ED VI+ +
Sbjct: 201 SGVVELGSLRHIPEDKSVIEMV 222
Score = 55 (24.4 bits), Expect = 9.6e-11, Sum P(3) = 9.6e-11
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 7 LMDRLRPLVGLKGWDYCVLWKLSD----DQRFIAWIDCCCAGIEGTQNDD 52
L LR +V WDY + W S+ D + W D C +G +D
Sbjct: 50 LQQGLRHVVEGSDWDYALFWLASNVNSSDGCVLIWGDGHCRVKKGASGED 99
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 147 (56.8 bits), Expect = 1.0e-10, Sum P(4) = 1.0e-10
Identities = 31/63 (49%), Positives = 46/63 (73%)
Query: 313 LEDDVKYRPRR--NGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAI 370
+E K R R+ NG+E ++ AER+RR+KLN R YALRA+VP ++K+D+A++L DAI
Sbjct: 432 VEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAI 491
Query: 371 EYV 373
Y+
Sbjct: 492 AYI 494
Score = 61 (26.5 bits), Expect = 1.0e-10, Sum P(4) = 1.0e-10
Identities = 31/134 (23%), Positives = 59/134 (44%)
Query: 402 MGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMG-NGRKQDQDSGNTIDKGQQME-VQV 459
+G ++ N +KS+ + K + ++ + GRK G+ ++ V +
Sbjct: 487 LGDAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGM 546
Query: 460 EV-AQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNVKKRD 518
E+ ++ G + I+V + RLM AL L LEV +A+++ L+ VK
Sbjct: 547 EIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGF 606
Query: 519 NEMVQADHVRDSLL 532
Q + +R SL+
Sbjct: 607 RIYTQ-EQLRASLI 619
Score = 59 (25.8 bits), Expect = 1.0e-10, Sum P(4) = 1.0e-10
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 5 QTLMDRLRPLV-GL-KGWDYCVLWKLSDD---QRFIAWIDCCCAGIEGTQN 50
+TL RL+ L+ G +GW Y + W+ S D + W D G E N
Sbjct: 66 ETLQQRLQALIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKAN 116
Score = 41 (19.5 bits), Expect = 1.0e-10, Sum P(4) = 1.0e-10
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 220 GYSSSSKNVKRHRNDMFFEGSRDDSTHQNGIQEMDNASNMNMQFMEPNMGNKELQQGNYD 279
G SSS + ++ F GS T + S ++ Q P N ++ N+
Sbjct: 296 GAPSSSSQLFS-KSIQFENGSSSTITENPNLDP--TPSPVHSQTQNPKFNNTFSRELNFS 352
Query: 280 DLNKDLIKP 288
+ L+KP
Sbjct: 353 TSSSTLVKP 361
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 143 (55.4 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 27/54 (50%), Positives = 41/54 (75%)
Query: 320 RPRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
R NG+E ++ AER+RR+KLN R Y+LRA+VP ++K+D+A++L DAI Y+
Sbjct: 405 RKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYI 458
Score = 77 (32.2 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 436 GNGRKQDQDSGNTIDKGQQMEVQVEV-AQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGL 494
GN + +D +++ + +++EV ++ G + I++ C + + MEAL L L
Sbjct: 487 GNAKSSVKDR-KCLNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDL 545
Query: 495 EVTNANVTSRTGLVSNVFNVKKRDNEMVQADHVRDSLLE 533
EV +A+++ L+ VK N+ D ++ +L E
Sbjct: 546 EVNHASLSVVNDLMIQQATVKM-GNQFFTQDQLKVALTE 583
Score = 44 (20.5 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 16/78 (20%), Positives = 34/78 (43%)
Query: 82 LSQLPSSMPLDSGIYAQSLISNQPRWLNFSNSADLEVMEET-------LWTRVLIPIMGG 134
L + S +G+ Q+ ++ WL+ SN+ E L T V + G
Sbjct: 167 LVSMTQSFVKGTGLPGQAFSNSDTIWLSGSNALAGSSCERARQGQIYGLQTMVCVATENG 226
Query: 135 LIELFATKEVSEDPHVID 152
++EL +++ + + ++D
Sbjct: 227 VVELGSSEIIHQSSDLVD 244
Score = 43 (20.2 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 7 LMDRLRPLV-GL-KGWDYCVLWKLS 29
L RL+ L+ G + W Y V W+ S
Sbjct: 63 LQQRLQALIEGANENWTYAVFWQSS 87
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 149 (57.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 321 PRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
PR SKNL+AER+RRK+LNDRL LR++VP I+K+DR +IL D I+YV
Sbjct: 172 PRSKLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYV 224
Score = 74 (31.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 24/104 (23%), Positives = 46/104 (44%)
Query: 430 PKQCHMGNGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEAL 489
P++ + N K D SGN + + + +V I++ C PG + + AL
Sbjct: 242 PEELDLLNTMK-DSSSGNNNEMLVRNSTKFDVENRGSGNTRIEICCPANPGVLLSTVSAL 300
Query: 490 NSLGLEVTNANVT--SRTGLVSNVFNVKKRDNEMVQADHVRDSL 531
LGLE+ V+ S G+ ++ + ++V D ++ +L
Sbjct: 301 EVLGLEIEQCVVSCFSDFGMQASCLQEDGK-RQVVSTDEIKQTL 343
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 124 (48.7 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 21/39 (53%), Positives = 34/39 (87%)
Query: 335 AERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
AE++RR+KLN R YALRA+VP ++++D+A++L DA+ Y+
Sbjct: 253 AEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYI 291
Score = 69 (29.3 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 26/106 (24%), Positives = 45/106 (42%)
Query: 397 AKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTIDKGQQME 456
+K DD+ + +++ L + +N P + Q + Q N +G +E
Sbjct: 296 SKIDDLETEIKKMKMTETDKLDNSSSNTSPSSVEYQVN------QKPSKSN---RGSDLE 346
Query: 457 VQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVT 502
VQV++ G E I+V E+ LM AL + V +AN +
Sbjct: 347 VQVKIV---GEEAIIRVQTENVNHPTSALMSALMEMDCRVQHANAS 389
Score = 68 (29.0 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 33/139 (23%), Positives = 59/139 (42%)
Query: 20 WDYCVLW-KLSDDQR---FIAWIDCCCAGIEGTQNDDGDELHFPVSPFLPCRDVIFPHPR 75
W Y + W K+ DDQ ++ W+D G +N++ E + S + C ++
Sbjct: 50 WAYVIFWQKMFDDQSDRSYLVWVD---GHFCGNKNNNSQENYTTNS--IECELMMDGGDD 104
Query: 76 TKSCELLSQLPSSMPLDSGIYAQSLI-SNQPRWLNFSN-SADLEVMEETLWTRVLIPIMG 133
+ S + +SL+ P L FSN E + T V IPI
Sbjct: 105 LELFYAASFYGEDRSPRKEVSDESLVWLTGPDELRFSNYERAKEAGFHGVHTLVSIPINN 164
Query: 134 GLIELFATKEVSEDPHVID 152
G+IEL +++ + ++ + I+
Sbjct: 165 GIIELGSSESIIQNRNFIN 183
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 128 (50.1 bits), Expect = 4.6e-10, Sum P(4) = 4.6e-10
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 318 KYRPRR--NGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
K R R+ +G++ ++ AER RR+KLN R YALRA+VP ++K+D+ ++L DA+ Y+
Sbjct: 328 KKRGRKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYI 385
Score = 82 (33.9 bits), Expect = 4.6e-10, Sum P(4) = 4.6e-10
Identities = 25/85 (29%), Positives = 46/85 (54%)
Query: 450 DKGQQMEVQVEVAQLNGNEFFIKVFC--EHKPGGFVRLMEALNSLGLEVTNANVTSRTGL 507
+K +M +++EV + ++ ++V +H PG RLM AL L LEV +A+++ L
Sbjct: 427 EKASEM-MKIEVKIMESDDAMVRVESRKDHHPGA--RLMNALMDLELEVNHASISVMNDL 483
Query: 508 VSNVFNVKKRDNEMVQADHVRDSLL 532
+ NVK + + + +RD L+
Sbjct: 484 MIQQANVKM-GLRIYKQEELRDLLM 507
Score = 45 (20.9 bits), Expect = 4.6e-10, Sum P(4) = 4.6e-10
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 1 MTVVQTLMDRLRPLV-GL-KGWDYCVLWKLS-DD---QRFIAWID 39
+++ TL RL ++ G + W Y + WK S DD + + W D
Sbjct: 28 LSLETTLPKRLHAVLNGTHEPWSYAIFWKPSYDDFSGEAVLKWGD 72
Score = 44 (20.5 bits), Expect = 4.6e-10, Sum P(4) = 4.6e-10
Identities = 33/141 (23%), Positives = 62/141 (43%)
Query: 123 LWTRVLIPIMGGLIELFATKEVSEDPHV---IDFIIAQC-------NISMEQDPMNMNTS 172
L T + IP G++EL +T+E+ + + I F+ N + E P + +S
Sbjct: 190 LQTILCIPSHNGVLELASTEEIRPNSDLFNRIRFLFGGSKYFSGAPNSNSELFPFQLESS 249
Query: 173 CYLDNASSSVNVHAMALENSDVPYDLSVDRIRICSGCTSPVNFLQQFGYSSSSKNVKRHR 232
C + + N + L+N Y+L+ + +P + FG +NVK+
Sbjct: 250 CS-STVTGNPNPSPVYLQNR---YNLNFSTSS-STLARAPCGDVLSFG-----ENVKQS- 298
Query: 233 NDMFFEGSRDDSTHQNGIQEM 253
FE +R+ +T+ + IQ +
Sbjct: 299 ----FE-NRNPNTYSDQIQNV 314
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 138 (53.6 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 46/206 (22%), Positives = 89/206 (43%)
Query: 326 KEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVXXXXXXXXXXXX 385
++ + V E+KRR+KLN+R LR ++P I K+D+ +IL D IEY+
Sbjct: 436 RDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELES 495
Query: 386 XXXXNSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDS 445
++D + + S + N T G K G + D+
Sbjct: 496 CRE-STDTETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNV----GEAEPADT 550
Query: 446 GNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRT 505
G T G + + + GNE I++ C + G + +M+ ++ L L+ + ++
Sbjct: 551 GFT---G--LTDNLRIGSF-GNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSSTGD 604
Query: 506 GLVSNVFNVKKRDNEMVQADHVRDSL 531
GL+ N K + +++ ++++L
Sbjct: 605 GLLCLTVNCKHKGSKIATPGMIKEAL 630
Score = 83 (34.3 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 18/71 (25%), Positives = 39/71 (54%)
Query: 91 LDSGIYAQSLISNQPRWLNFSNSADLEVMEETLWTR-------VLIPIMGGLIELFATKE 143
+ G+ ++ + +P WL +++AD +V +L + V P +GG++E+ T+
Sbjct: 132 IGEGMPGRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGVVEIGTTEH 191
Query: 144 VSEDPHVIDFI 154
++ED +VI +
Sbjct: 192 ITEDMNVIQCV 202
Score = 44 (20.5 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 2 TVVQTLMDRLRPLVGLKGWDYCVLWKLSDDQR-FIAWID 39
TV + L L V W Y + W +S Q + W D
Sbjct: 9 TVPENLKKHLAVSVRNIQWSYGIFWSVSASQSGVLEWGD 47
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 138 (53.6 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 44/205 (21%), Positives = 90/205 (43%)
Query: 327 EPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVXXXXXXXXXXXXX 386
E + ++E+KRR+KLN+R LR+++P I+K+D+ +IL D IEY+
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL--- 457
Query: 387 XXXNSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSG 446
S + A + + I++ E + K + ++G D
Sbjct: 458 ---ESCRESA--DTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYA 512
Query: 447 NTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTG 506
D + ++ L GNE I++ C + G + +M+ ++ L L+ + ++ G
Sbjct: 513 GLTDN-------LRISSL-GNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDG 564
Query: 507 LVSNVFNVKKRDNEMVQADHVRDSL 531
L+ N K + ++ ++++L
Sbjct: 565 LLCLTVNCKHKGTKIATTGMIQEAL 589
Score = 82 (33.9 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 91 LDSGIYAQSLISNQPRWLNFSNSADLEVMEETLWTR-------VLIPIMGGLIELFATKE 143
+ GI +L + +P WL + +AD +V +L + V P +GG++E+ T+
Sbjct: 128 IGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGTTEH 187
Query: 144 VSEDPHVIDFI 154
+ ED +VI +
Sbjct: 188 IKEDMNVIQSV 198
Score = 42 (19.8 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 2 TVVQTLMDRLRPLVGLKGWDYCVLWKLSDDQR-FIAWID 39
TV L +L V W Y + W +S Q + W D
Sbjct: 8 TVPDNLKKQLAVSVRNIQWSYGIFWSVSASQPGVLEWGD 46
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 52/193 (26%), Positives = 92/193 (47%)
Query: 330 SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVXXXXXXXXXXXXXXXX 389
SKN+ ER RRK+LN++L+ALRA+VP ITK+D+A+I+ DAI ++
Sbjct: 96 SKNIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEISV 155
Query: 390 NSDDDGAAKN-----DDMGISVNNHNAVKSES-LTQNGTNFGPKTEPKQCHMGNGRKQDQ 443
A DD G+++ + ++S L G + P + K+ +
Sbjct: 156 LQSAAAVAATAVEDVDDSGVTMPSMKKLRSTPPLDGGGGALRVASSPPLQILEVETKETE 215
Query: 444 DS-GNTIDKGQQM--EVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNAN 500
D G + Q + Q++V+++ + + C G ++ A+ SL L+V +A+
Sbjct: 216 DFYGLILQTSQSWPSDPQLQVSKVGEKTVAVSIRCAKTRGAMAKVCHAVESLYLKVVSAS 275
Query: 501 VTSRTG-LVSNVF 512
V + G +V +F
Sbjct: 276 VAAVDGTIVHTMF 288
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 142 (55.0 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 27/51 (52%), Positives = 41/51 (80%)
Query: 323 RNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
R K +S+ L++ER+RR ++ D+LYALR+LVP ITK+D+A+I+ DA+ YV
Sbjct: 123 RKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYV 173
Score = 65 (27.9 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 457 VQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSL-GLEVTNANVTS 503
+Q++V Q+ F++++ C G L ++L SL +V N+N++S
Sbjct: 225 IQMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSS 272
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 113 (44.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 21/42 (50%), Positives = 34/42 (80%)
Query: 332 NLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
+++AERKRR+KL R AL AL+P + K+D+A++L DAI+++
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHI 168
Score = 95 (38.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 16/44 (36%), Positives = 30/44 (68%)
Query: 458 QVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANV 501
++EV +++G + IK+ CE + G +++M + LGL +TN+NV
Sbjct: 225 EIEV-RVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNV 267
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 143 (55.4 bits), Expect = 6.5e-09, Sum P(4) = 6.5e-09
Identities = 30/60 (50%), Positives = 45/60 (75%)
Query: 320 RPRRNGKEP-----QSKNLV-AERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
RPR+ G+ P ++ N V AER+RR+KLN R YALR++VP I+K+D+A++L DA+ Y+
Sbjct: 416 RPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYI 475
Score = 52 (23.4 bits), Expect = 6.5e-09, Sum P(4) = 6.5e-09
Identities = 13/56 (23%), Positives = 25/56 (44%)
Query: 463 QLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNVKKRD 518
Q +G + +++ C + R+ A +EV N+N+ V + F VK +
Sbjct: 509 QTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVKSEE 564
Score = 48 (22.0 bits), Expect = 6.5e-09, Sum P(4) = 6.5e-09
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 81 LLSQLPSSMPLDSGIYAQSLISNQPRWLN--FSNSADLEVME-----ETLWTRVLIPIMG 133
LLS + S P G + S +P WL+ ++ +D V + T VL+P
Sbjct: 152 LLSSMYFSFPRGEGGPGKCFASAKPVWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDL 211
Query: 134 GLIELFATKEVSE 146
G++EL +T + E
Sbjct: 212 GVVELGSTSCLPE 224
Score = 46 (21.3 bits), Expect = 6.5e-09, Sum P(4) = 6.5e-09
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 12 RPLVGLKGWDYCVLWKLSDDQR---FIAWIDCCC 42
RP W+Y + W++S + + W D C
Sbjct: 58 RPNASNFSWNYAIFWQISRSKAGDLVLCWGDGYC 91
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 149 (57.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 31/56 (55%), Positives = 45/56 (80%)
Query: 318 KYRPRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
K + ++ +P SKNL+AER+RRK+LNDRL LR++VP I+K+DR +IL DAI+Y+
Sbjct: 166 KKKSKKLEGQP-SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYM 220
Score = 51 (23.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 471 IKVFCEHKPGGFVRLMEALNSLGLEV 496
+ + C KPG + + L +LGLE+
Sbjct: 279 VDICCSPKPGLLLSTVNTLETLGLEI 304
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 126 (49.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 316 DVKYRPRRNGKEPQSKN---LVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEY 372
DV P P S+N ++AERKRR+KL+ R AL +VP + K+D+A++L DAI+Y
Sbjct: 163 DVAKAPAAAASRPASQNQEHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKY 222
Query: 373 V 373
V
Sbjct: 223 V 223
Score = 76 (31.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 442 DQDSGNTIDK----GQQMEVQVEV-AQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEV 496
D D G++ D+ G+ E+ A+++ +K+ CE++ G + + + ++GL +
Sbjct: 256 DDDDGSSCDENFDGGEATAGLPEIEARVSERTVLVKIHCENRKGALITALSEVETIGLTI 315
Query: 497 TNANV 501
N NV
Sbjct: 316 MNTNV 320
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 127 (49.8 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 28/54 (51%), Positives = 42/54 (77%)
Query: 324 NG--KEPQ--SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
NG +EP ++++AERKRR+KLN+RL AL AL+P + K D+AT+L DAI+++
Sbjct: 121 NGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHL 174
Score = 67 (28.6 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 445 SGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSR 504
S + + +Q +E A+++ + I+V CE G ++++ +L LEV N+ T
Sbjct: 228 SSDEVSIFKQTMPMIE-ARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNS-FTLP 285
Query: 505 TGLVSNVFNV-KKRDNE 520
G + V + K DN+
Sbjct: 286 FGNSTLVITILTKMDNK 302
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 121 (47.7 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 329 QSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
Q +++VAERKRR+K+N R L A++P + K+D+ATIL DA Y+
Sbjct: 128 QLEHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYI 172
Score = 72 (30.4 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 456 EVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANV 501
E++V + N N +++ CE+ G VR++ + + L + NANV
Sbjct: 212 EIEVRCSPTN-NVVMVRIHCENGEGVIVRILAEVEEIHLRIINANV 256
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 144 (55.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 320 RPRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
R NG+E ++ AER+RR+KLN R YALR++VP I+K+D+A++L DAI Y+
Sbjct: 384 RKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYI 437
Score = 54 (24.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 20 WDYCVLWKLS---DDQRFIAWIDCCC 42
W+Y + W+ + Q+ + W D CC
Sbjct: 66 WNYAIFWQQTMSRSGQQVLGWGDGCC 91
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 100 (40.3 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 17/42 (40%), Positives = 33/42 (78%)
Query: 332 NLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
++++ER+RR+KLN+ L++L+P + K+D+A+IL + I Y+
Sbjct: 379 HVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYL 420
Score = 97 (39.2 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 94 GIYAQSLISNQPRWLNFSNSAD-------LEVMEETLWTRVLIPIMGGLIELFATKEVSE 146
G+ +S SN+ WL + SAD L ++ T V IP M G++EL T VSE
Sbjct: 131 GLPGRSYASNRSVWLCNAQSADSKTFLRALLAKSASIQTIVCIPFMSGVLELGTTDPVSE 190
Query: 147 DPHVIDFIIA 156
DP++++ I+A
Sbjct: 191 DPNLVNRIVA 200
Score = 39 (18.8 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 10 RLRPLVGLKGWDYCVLWKLSDD-QRFIAWID 39
RL V W Y + W S + W D
Sbjct: 22 RLAAAVRSISWSYTIFWSTSTSLPGVLTWND 52
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 143 (55.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 26/44 (59%), Positives = 40/44 (90%)
Query: 330 SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
SKN+V+ER RR+KLN RL+ALR++VP I+KLD+A+++ D+I+Y+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYM 96
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 118 (46.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 323 RNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
RN Q +++AERKRR+KL R AL ALVP + K+D+A++L DA++++
Sbjct: 145 RNQSNAQD-HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHI 194
Score = 71 (30.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 458 QVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTS-RTGLVSNVFNVKK 516
++EV + + + IK+ CE + G ++M + L + +TN++V + L + K+
Sbjct: 248 EIEV-RFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFGPTLDITIIAKKE 306
Query: 517 RDNEMVQADHVR 528
D +M D V+
Sbjct: 307 SDFDMTLMDVVK 318
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 146 (56.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 34/58 (58%), Positives = 44/58 (75%)
Query: 320 RPRRNGKEPQ----SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
RPR + + PQ SKNL+AER+RRK+LNDRL LR++VP I+K+DR +IL D I YV
Sbjct: 182 RPR-SCRPPQPGAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYV 238
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 103 (41.3 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 326 KEPQSKN-LVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
+E KN +++ER+RR+KLN+ L+++VP I K+D+A+IL + I Y+
Sbjct: 386 QESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYL 434
Score = 74 (31.1 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 28/82 (34%), Positives = 39/82 (47%)
Query: 94 GIYAQSLISNQPRWLNFSNSADLEVMEETLWTRVLI--PIMGGLIELFATKEVSEDPHVI 151
G+ +S SN WL + SAD + +L + +I P G++EL T DP
Sbjct: 131 GLPGKSYASNASVWLRNAQSADSKTFLRSLLAKTIICIPFTSGVLELGTT-----DP--- 182
Query: 152 DFIIAQCNISMEQ---DPMNMN 170
FIIA +MEQ DP +N
Sbjct: 183 TFIIAYACHNMEQVLEDPKLVN 204
Score = 49 (22.3 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 414 SESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTI--DKGQQMEVQVEVAQLNGNEFFI 471
SE Q T G + ++C + G++ + G + D G++ V V + +
Sbjct: 448 SEPSHQRATETG---QQRRCEI-TGKELVSEIGVSGGGDAGREHH-HVNVT-VTDKVVLL 501
Query: 472 KVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLV 508
+V C K R+ +A+ SL L+V + ++ GL+
Sbjct: 502 EVQCRWKELVMTRVFDAIKSLCLDVLSVQASAPDGLL 538
Score = 42 (19.8 bits), Expect = 1.7e-06, Sum P(4) = 1.7e-06
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 20 WDYCVLWKLSDD-QRFIAWIDCCCAGIEGTQ 49
W Y + W +S + W D G+ T+
Sbjct: 32 WSYAIFWSISTSCPGVLTWNDGFYNGVVKTR 62
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 95 (38.5 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 19/44 (43%), Positives = 33/44 (75%)
Query: 331 KN-LVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
KN +++ER+RR+KL + L+++VP I K+D+A+IL + I Y+
Sbjct: 243 KNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYL 286
Score = 76 (31.8 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 111 SNSADLEVMEE-TLWTRVLIP-IMGGLIELFATKEVSEDPHVIDFIIA 156
+ +ADL + ++ T V +P IM G++EL T VSEDP ++D I A
Sbjct: 5 NGAADLPTSQSASIKTIVCVPFIMHGVLELGTTDPVSEDPALVDRITA 52
Score = 55 (24.4 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 459 VEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLV 508
V V ++ E +++ C+ K R+ +A+ + L+V + ++ GL+
Sbjct: 349 VNVTIMDNKELLLELQCQWKELLMTRVFDAIKGVSLDVLSVQASTSDGLL 398
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 96 (38.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/61 (39%), Positives = 42/61 (68%)
Query: 318 KYRPRRNGKEPQSK--NLVA-ERKRRKKLNDRLYALRALVP--IITKLDRATILVDAIEY 372
K +P +N +E +++ N +A ER RR+++N+ + +LRAL+P I + D+A+I+ AI Y
Sbjct: 163 KTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINY 222
Query: 373 V 373
V
Sbjct: 223 V 223
Score = 82 (33.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 411 AVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFF 470
+++S+ TQ +N E H+ +G + D T++ Q ++E + N
Sbjct: 232 SLESQKRTQQQSN-SEVVENALNHL-SGISSN-DLWTTLED-QTCIPKIEATVIQ-NHVS 286
Query: 471 IKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRT-GLVSNVFNVKKRDN-EMVQADHV 527
+KV CE K G ++ + +L L L V + N+T+ + VS FN+K D ++ AD +
Sbjct: 287 LKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDECDLESADEI 345
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 103 (41.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 321 PRRNGKEPQS--KNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
P R + P + ++++AERKRR+KL + AL +VP + K D+ ++L I+YV
Sbjct: 275 PERRSRPPANAQEHVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYV 329
Score = 77 (32.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 442 DQDSGNT---IDKGQQMEVQVEV-AQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVT 497
D D G+ D G V A ++GN +K+ C+ + G V ++ L GL +
Sbjct: 363 DDDGGSASSGTDDGSSSSSSPTVEASIHGNTVLLKICCKERRGLLVMILSELEKQGLSII 422
Query: 498 NANVTSRTGLVSNV 511
N +V T N+
Sbjct: 423 NTSVVPFTDSCLNI 436
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 117 (46.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 321 PRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
PR +G P ++ AER+RR+KLN R LRA VP ++++D+A++L DA Y+
Sbjct: 103 PRPDG--PTVSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYI 153
Score = 55 (24.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/76 (30%), Positives = 31/76 (40%)
Query: 429 EPKQCHMGNGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVF---CEHKPGGFVRL 485
EP C G G G ++ VEV ++ + ++V H P RL
Sbjct: 176 EPSSCG-GGGNASYHGGGGGGGAAPGLDEAVEVRKMGRDAAAVRVTTTGARHAPA---RL 231
Query: 486 MEALNSLGLEVTNANV 501
M AL SL L V +A V
Sbjct: 232 MGALRSLELPVQHACV 247
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 90 (36.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 459 VEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNVKKRD 518
VEV +L G + IK+ +PG ++ + AL L L + + N+T+ V FNVK
Sbjct: 318 VEV-KLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFNVKITS 376
Query: 519 NEMVQADHVRDSLLEL 534
A+ + S+ ++
Sbjct: 377 ETRFTAEDIASSIQQI 392
Score = 88 (36.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 320 RPRRNGKEPQSK---NLVAERKRRKKLNDRLYALRALVP--IITKLDRATILVDAIEYV 373
R + +E +S+ ++ ER RRK++N+ L LR+L+P + + D+A+I+ AIE+V
Sbjct: 184 RTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFV 242
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 118 (46.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 331 KNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
++++AERKRR+K+N R L ++P + K+D+ATIL DA+ YV
Sbjct: 192 EHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYV 234
Score = 55 (24.4 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 458 QVEVAQLNGNEFFIKVFCEHK-PGGFVRLMEALNSLGLEVTNANV 501
++E +GN +++ E+ G VRL+ A+ L L +T+ NV
Sbjct: 294 EIEAKISHGN-VMVRIHGENNGKGSLVRLLAAVEGLHLGITHTNV 337
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 114 (45.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 20/42 (47%), Positives = 33/42 (78%)
Query: 332 NLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
+++AER+RR+K+N R L ++P + K+D+ATIL DA++YV
Sbjct: 168 HIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYV 209
Score = 58 (25.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 437 NGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEV 496
+GR+ G+ +G+ E++V V + ++V C + G VRL+ + L L +
Sbjct: 239 SGRQSAAGDGD--GEGRVPEIEVRVWE---RSVLVRVQCGNSRGLLVRLLSEVEELRLGI 293
Query: 497 TNANV 501
T+ +V
Sbjct: 294 THTSV 298
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 123 (48.4 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 55/219 (25%), Positives = 93/219 (42%)
Query: 322 RRNGK-EPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVXXXXXXX 380
RR G+ + ++K ER+RR LN+R AL+ L+P +K DRA+IL D I+Y+
Sbjct: 204 RRKGRGKRKNKPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRV 263
Query: 381 XXXXXXXXXNSDDDGAAKNDDMGISVNNHNAVK--SESLTQNGTNFGPKTEPK---QCHM 435
G KN+++ + NN N +E + N K E QC
Sbjct: 264 SELKYLVERKRCG-GRHKNNEVDDNNNNKNLDDHGNEDDDDDDENMEKKPESDVIDQCSS 322
Query: 436 GNGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLE 495
N + K + EV V + +E IKV + K + + + L+ L L+
Sbjct: 323 NNSLRCSWLQR----KSKVTEVDVRIVD---DEVTIKVVQKKKINCLLLVSKVLDQLQLD 375
Query: 496 VTNANVTSRTGLVSNVFNVKKRDNEMVQADHVRDSLLEL 534
+ + S +FN K + + A + + ++E+
Sbjct: 376 LHHVAGGQIGEHYSFLFNTKIYEGSTIYASAIANRVIEV 414
Score = 47 (21.6 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 142 KEVSEDPHVIDFIIAQCNISMEQDPMN--MNTS 172
+ +S + H+I+ +I + N + +D N MNTS
Sbjct: 73 QNISNNNHLINQMIQESNWGVSEDNSNFFMNTS 105
>UNIPROTKB|Q6YTU1 [details] [associations]
symbol:P0419H09.4 "cDNA clone:002-131-D10, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP004213
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:HQ858861 EMBL:AP005918 EMBL:AK107626
RefSeq:NP_001062077.1 UniGene:Os.55174
EnsemblPlants:LOC_Os08g37730.1 GeneID:4345867 KEGG:osa:4345867
eggNOG:NOG250596 ProtClustDB:CLSN2919896 Uniprot:Q6YTU1
Length = 363
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 50/216 (23%), Positives = 92/216 (42%)
Query: 320 RPRRNGKEPQSK---NLVAERKRRKKLNDRLYALRALVPI--ITKLDRATILVDAIEYVX 374
R +N +E +S+ ++ ER RRK++N+ L LR+L+P + + D+A+I+ AI YV
Sbjct: 127 RTVKNREEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIGGAINYVK 186
Query: 375 XXXXXXXXXXXXXXXN-SDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQC 433
+ D AA G ++ + T T TE
Sbjct: 187 EMEQLLQSLEAHRHARRARTDAAAALPFAGFFTFPQYSMSAVPTTTTTTVAAAATENGNA 246
Query: 434 HMGNGRKQDQDSGNTIDKGQQM-EVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSL 492
G G D D+ + K + +++V + + + N +KV +P +R++ L
Sbjct: 247 VAGAGAGDDADADVSGSKPSSVADIEVTMVESHAN---LKVLSRRRPRQLLRMVAGLQHH 303
Query: 493 GLEVTNANVTSRTGLVSNVFNVK-KRDNEMVQADHV 527
L V + NV S + ++K + D ++ D +
Sbjct: 304 RLAVLHLNVASAGHMALYSLSLKVEEDCQLTSVDDI 339
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 122 (48.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 321 PRRNGK-EPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
PR G P ++ AER+RR+KLN R LRA VP ++++D+A++L DA++Y+
Sbjct: 83 PRSGGGGAPPIGHVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYI 136
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 477 HKPGGFVRLMEALNSLGLEVTNANVTSRTG 506
H P R+M A+ +L L V +A+V +R G
Sbjct: 202 HAPA---RMMCAVRALNLAVQHASV-ARVG 227
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 103 (41.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 21/40 (52%), Positives = 32/40 (80%)
Query: 331 KNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAI 370
++++AERKRR+KL+++ AL AL+P + K D+ TIL DAI
Sbjct: 119 EHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAI 158
Score = 61 (26.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 10/44 (22%), Positives = 25/44 (56%)
Query: 458 QVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANV 501
++E A+++ N+ I++ CE G + ++ + + L + N+ V
Sbjct: 216 EIE-AKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIV 258
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 84 (34.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 20/59 (33%), Positives = 40/59 (67%)
Query: 320 RPRRNGKEPQSK---NLVAERKRRKKLNDRLYALRALVP--IITKLDRATILVDAIEYV 373
+P +N +E +S+ ++ ER RR+++N L +LR+++P I + D+A+I+ AI++V
Sbjct: 180 KPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFV 238
Score = 83 (34.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/92 (25%), Positives = 46/92 (50%)
Query: 445 SGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSR 504
+ N ++ +++++ V + + N +K+ C K G +R + L L V + N+TS
Sbjct: 280 ASNKEEQSSKLKIEATVIESHVN---LKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSP 336
Query: 505 TGL-VSNVFNVKKRDN-EMVQADHVRDSLLEL 534
T VS FN+K D + AD + ++ ++
Sbjct: 337 TNTSVSYSFNLKMEDECNLGSADEITAAIRQI 368
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 103 (41.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 21/44 (47%), Positives = 34/44 (77%)
Query: 331 KN-LVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
KN +++ER+RR+KLN+ L++LVP I K+D+A+IL + I Y+
Sbjct: 187 KNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYL 230
Score = 62 (26.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 459 VEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNVKKRD 518
V V ++ +E ++V C K R+ +A+ SL L+V + ++ GL+ K
Sbjct: 291 VRVIVMDKDELHLEVQCRWKELMMTRVFDAIKSLRLDVVSVQASAPDGLLGLKIRAKYAS 350
Query: 519 NEMVQADHVRDSL 531
+ V + ++L
Sbjct: 351 SAAVVPAMISETL 363
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 105 (42.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 335 AERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVXXXXXXXXXXXXXXXXNSDDD 394
AER+RR+++N L LR+L+P TK D+A++L + IE+V D
Sbjct: 113 AERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTTAIAAAAAAG-DYH 171
Query: 395 GAAKNDDMGISVNNHNAVKSESL 417
G ++DD + V +A + L
Sbjct: 172 GNDEDDDDAV-VGRRSAAAQQLL 193
Score = 59 (25.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 20/77 (25%), Positives = 32/77 (41%)
Query: 475 CEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNVKKRDNEMVQADHVRDSLLEL 534
CE +P + AL +L L A +T+ G V +V + + + D V D +
Sbjct: 220 CEDRPDLIPDIARALAALRLRARRAEITTLGGRVRSVLLITADEQQQQHCDDVDDDE-DG 278
Query: 535 TRNPAREWIENVAKASD 551
R R I+ A+D
Sbjct: 279 HRLLLRHGIDGAGAAAD 295
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 118 (46.6 bits), Expect = 0.00075, P = 0.00075
Identities = 52/221 (23%), Positives = 91/221 (41%)
Query: 323 RNGK-EPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVXXXXXXXX 381
R G+ +S+ ER+RR NDR + L+ L+P TK+DRA+I+ +AI+Y+
Sbjct: 238 RKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIE 297
Query: 382 XXXXXXXXNSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQ-CHMGNGRK 440
+K V + + ++ N+ P++E Q C N
Sbjct: 298 EFKMLVEKKRCGRFRSKKR---ARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNNNN 354
Query: 441 QDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNAN 500
+ S K + EV V + +E IK+ + K + + L+ L L++ +
Sbjct: 355 SLRCSWLK-RKSKVTEVDVRIID---DEVTIKLVQKKKINCLLFTTKVLDQLQLDLHHVA 410
Query: 501 VTSRTGLVSNVFNVKKRDNEMVQADHVRDSLLELTRNPARE 541
S +FN K + V A + D+L+E+ E
Sbjct: 411 GGQIGEHYSFLFNTKICEGSCVYASGIADTLMEVVEKQYME 451
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 582 525 0.00091 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 622 (66 KB)
Total size of DFA: 320 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.28u 0.19s 46.47t Elapsed: 00:00:02
Total cpu time: 46.28u 0.19s 46.47t Elapsed: 00:00:02
Start: Sat May 11 03:57:14 2013 End: Sat May 11 03:57:16 2013