BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045155
(582 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 270/583 (46%), Positives = 361/583 (61%), Gaps = 73/583 (12%)
Query: 4 VQTLMDRLRPLVGLKGWDYCVLWKLSDDQRFIAWIDCCCAGIEGTQNDDGDELHFPVSPF 63
+Q L+++LRPLVG + WDYCVLW+L++DQRF+ W+ CCC G E + +E +
Sbjct: 5 MQNLLEKLRPLVGARAWDYCVLWRLNEDQRFVKWMGCCCGGTELIAENGTEEFSYG---- 60
Query: 64 LPCRDVIFPHPRTKSCELLSQLPSSMPLDSGIYAQSLISNQPRWLNFSNSADLEVMEETL 123
CRDV+F HPRTKSCE LS LP+S+PLDSGIYA++L++NQ WL S S++ M+ET+
Sbjct: 61 -GCRDVMFHHPRTKSCEFLSHLPASIPLDSGIYAETLLTNQTGWL--SESSEPSFMQETI 117
Query: 124 WTRVLIPIMGGLIELFATKEVSEDPHVIDFIIAQCNISMEQDPMNMNTSCYLDNASSSVN 183
TRVLIPI GGL+ELFAT+ V+ED +V+DF++ CN+ M+ D + +N + S
Sbjct: 118 CTRVLIPIPGGLVELFATRHVAEDQNVVDFVMGHCNMLMD-DSVTINMMVADEVESKPYG 176
Query: 184 VHAMALE----------NSDVPYDLSVDRIRICSGCTSPVNFLQQFG-YSSSSKNVKR-- 230
+ + ++ N YD+S D+IR+ NFL Q Y + +K
Sbjct: 177 MLSGDIQQKGSKEEDMMNLPSSYDISADQIRL--------NFLPQMSDYETQHLKMKSDY 228
Query: 231 HRNDMFFEGSRDDSTHQNGIQEMDNASNMNMQ-------FMEPNMGNKELQQGNYDDLNK 283
H + + +NG +EM + N EP++ E Q N D+N+
Sbjct: 229 HHQALGY-------LPENGNKEMMGMNPFNTVEEDGIPVIGEPSLLVNEQQVVNDKDMNE 281
Query: 284 DLIKPDQNNNNNNNGRSDSISDCSDQIDDLEDDVKYRPRRNGKEPQSKNLVAERKRRKKL 343
NGR DS SDCSDQIDD EDD +++GK Q+KNL+AER+RRKKL
Sbjct: 282 -------------NGRVDSGSDCSDQIDD-EDD-PKYKKKSGKGSQAKNLMAERRRRKKL 326
Query: 344 NDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEENSDDDGAAKNDDMG 403
NDRLYALR+LVP ITKLDRA+IL DAI YVK+LQ + KEL++ELEENS+ + + G
Sbjct: 327 NDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETEDGSNRPQGG 386
Query: 404 ISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMG-NGRKQDQDSGNTIDKGQQMEVQVEVA 462
+S+N T F P C+ KQD D N+ DKGQ+ME QV+VA
Sbjct: 387 MSLNGTVV----------TGFHPGL---SCNSNVPSVKQDVDLENSNDKGQEMEPQVDVA 433
Query: 463 QLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFNVKKRDNEMV 522
QL+G EFF+KV CE+KPGGF RLMEAL+SLGLEVTNAN T LVSNVF V+K DNEMV
Sbjct: 434 QLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEKNDNEMV 493
Query: 523 QADHVRDSLLELTRNPAREWIEN-VAKASDSTVNNGINYHHHE 564
QA+HVR+SLLE+TRN +R W ++ +A S N ++Y H++
Sbjct: 494 QAEHVRNSLLEITRNTSRGWQDDQMATGSMQNEKNEVDYQHYD 536
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 87/164 (53%), Gaps = 15/164 (9%)
Query: 11 LRPLVGLKGWDYCVLWKLSDD-QRFIAWIDCCCAG------IEGTQNDDGDELHFPVSPF 63
LRP V + WD CV+WKL DD RFI W+ CCC+G I+ +++G + F
Sbjct: 14 LRPFVDSRTWDLCVIWKLGDDPSRFIEWVGCCCSGCYIDKNIKLENSEEGGTGRKKKASF 73
Query: 64 LPCRDVIFPHP-RTKSCELLSQLPSSMPLDSGIYAQSLISNQPRWLNFSNSADLEVMEET 122
CRD H RT +CE LS+ P MPL GI+ + ++S P+WL S S E
Sbjct: 74 --CRDDHNKHRIRTLACEALSRFPLFMPLYPGIHGEVVMSKSPKWLVNSGSK-----MEM 126
Query: 123 LWTRVLIPIMGGLIELFATKEVSEDPHVIDFIIAQCNISMEQDP 166
TRVL+P+ GL+ELFA D ++ I+++C E P
Sbjct: 127 FSTRVLVPVSDGLVELFAFDMRPFDESMVHLIMSRCTTFFEPFP 170
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 110/206 (53%), Gaps = 31/206 (15%)
Query: 329 QSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELE 388
+SKNL +ERKRR+++N +Y LRA+VP ITKL++ I DA++Y+ +L ++++L++EL+
Sbjct: 262 KSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELK 321
Query: 389 ENSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNT 448
G + + I+ +A+ P+ E + S +
Sbjct: 322 ------GINEMECKEIAAEEQSAIAD-----------PEAE-------------RVSSKS 351
Query: 449 IDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLV 508
+ ++ EV++EV + +F I+V EHK GF RL+EA++ LE+ + N T V
Sbjct: 352 NKRVKKNEVKIEVHETGERDFLIRVVQEHKQDGFKRLIEAVDLCELEIIDVNFTRLDLTV 411
Query: 509 SNVFNVKKRDNEMVQADHVRDSLLEL 534
V NVK + + + +RD LL++
Sbjct: 412 MTVLNVKA-NKDGIACGILRDLLLKM 436
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 25/205 (12%)
Query: 330 SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEE 389
+KNL+AER+RRKKLNDRLY LR++VP I+K+DRA+IL DAI+Y+K+L ++ +L ELE
Sbjct: 306 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE- 364
Query: 390 NSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTI 449
+ SL ++F P T Q +++ S
Sbjct: 365 ---------------------STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPS 403
Query: 450 DKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVS 509
KGQQ V+V + + G I +FC +PG + M+AL++LGL+V A ++ G
Sbjct: 404 PKGQQARVEVRLRE--GRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFAL 461
Query: 510 NVFNVKK-RDNEMVQADHVRDSLLE 533
+VF ++ ++ + + D ++ L +
Sbjct: 462 DVFRAEQCQEGQEILPDQIKAVLFD 486
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 98/197 (49%), Gaps = 33/197 (16%)
Query: 330 SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEE 389
+KNL+AER+RRKKLNDRLY LR++VP I+K+DRA+IL DAI+Y+K+L ++ +L ELE
Sbjct: 266 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELES 325
Query: 390 NSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTI 449
+ LT + + + C S
Sbjct: 326 TPPSSSSL-----------------HPLTPTPQTLSYRVKEELC---------PSSSLPS 359
Query: 450 DKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVS 509
KGQQ V+V + + G I +FC +PG + M AL++LGL+V A ++ G
Sbjct: 360 PKGQQPRVEVRLRE--GKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFAL 417
Query: 510 NVFNVKKRDNEMVQADH 526
+VF E Q DH
Sbjct: 418 DVFRA-----EQCQEDH 429
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 27/189 (14%)
Query: 321 PRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQE 380
P P SKN+V+ER RR+KLN RL+ALR++VP ITK+D+A+I+ DAI Y++ LQ +E
Sbjct: 45 PDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEE 104
Query: 381 KELKEELEENSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRK 440
K+L+ E+ E ES ++ +F + +K
Sbjct: 105 KKLEAEIRE------------------------LESTPKSSLSFSKDFDRDLLVPVTSKK 140
Query: 441 QDQ-DSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNA 499
Q DSG++ + +E++V + + V C + V+L E SL L++ +
Sbjct: 141 MKQLDSGSSTSLIEVLELKVTF--MGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTS 198
Query: 500 NVTSRTGLV 508
N+TS +G++
Sbjct: 199 NLTSFSGMI 207
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 42/192 (21%)
Query: 320 RPRRNGKEPQS------KNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
+PR+ G++P + ++ AER+RR+KLN R Y+LRA+VP ++K+D+A++L DAI Y+
Sbjct: 398 KPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYI 457
Query: 374 KQLQ---KQEKELKEELEENSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEP 430
+L+ +Q + KEE+++ D G+S +N
Sbjct: 458 NELKSKLQQAESDKEEIQKKLD----------GMSKEGNNG------------------- 488
Query: 431 KQCHMGNGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALN 490
K C R +++ S N +E++++V ++ G + I+V C K R MEAL
Sbjct: 489 KGC---GSRAKERKSSNQDSTASSIEMEIDV-KIIGWDVMIRVQCGKKDHPGARFMEALK 544
Query: 491 SLGLEVTNANVT 502
L LEV +A+++
Sbjct: 545 ELDLEVNHASLS 556
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 323 RNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKE 382
R K +S+ L++ER+RR ++ D+LYALR+LVP ITK+D+A+I+ DA+ YV++LQ Q K+
Sbjct: 123 RKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKK 182
Query: 383 LKEELEENSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQD 442
LK ++ A SL G Q H + +K
Sbjct: 183 LKSDI-----------------------AGLEASLNSTGG--------YQEHAPDAQKTQ 211
Query: 443 QDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSL-GLEVTNANV 501
G +++ +Q++V Q+ F++++ C G L ++L SL +V N+N+
Sbjct: 212 PFRGINPPASKKI-IQMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNL 270
Query: 502 TS 503
+S
Sbjct: 271 SS 272
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 40/214 (18%)
Query: 329 QSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKE--- 385
+S NL AER+RR+KL+ RL ALR+ VPI+T + +A+I+ DAI Y+ +LQ K L E
Sbjct: 30 KSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFH 89
Query: 386 ELEENSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDS 445
E+EE + + D M V++ L + G + + C +G +
Sbjct: 90 EMEEAPPEIDEEQTDPM-----IKPEVETSDLNEEMKKLGIEENVQLCKIGERK------ 138
Query: 446 GNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRT 505
F++K+ E + G F + ME + LG E+ + ++T+
Sbjct: 139 -----------------------FWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSN 175
Query: 506 GLVSNVFNVKKRDNEMVQADHVRDSLLELTR-NP 538
G + + + + E+ + +D LLE+ R NP
Sbjct: 176 GAI--LISASVQTQELCDVEQTKDFLLEVMRSNP 207
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 13/183 (7%)
Query: 330 SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEE 389
SKN+V+ER RR+KLN RL+ALR++VP I+KLD+A+++ D+I+Y+++L QEK L+ E+ E
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 390 NSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTI 449
+N V +++ +E+ Q+ ++ M + + + D +
Sbjct: 113 LESRSTLLEN-----PVRDYDCNFAETHLQDFSDNN--------DMRSKKFKQMDYSTRV 159
Query: 450 DKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVS 509
++++V + + + C K V+L + L SL L + N +S T +S
Sbjct: 160 QHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLS 219
Query: 510 NVF 512
Sbjct: 220 TTL 222
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 49/224 (21%)
Query: 320 RPRRNGKEPQS------KNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
+PR+ G++P + ++ AER+RR+KLN R Y+LRA+VP ++K+D+A++L DAI Y+
Sbjct: 399 KPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYI 458
Query: 374 KQL----QKQEKELKEELEENSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTE 429
+L QK E + KEEL++ I V N A ++S ++
Sbjct: 459 SELKSKLQKAESD-KEELQKQ-------------IDVMNKEAGNAKSSVKD--------- 495
Query: 430 PKQCHMGNGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEAL 489
++C +Q+S I +MEV V++ G + I++ C + + MEAL
Sbjct: 496 -RKCL-------NQESSVLI----EMEVDVKII---GWDAMIRIQCSKRNHPGAKFMEAL 540
Query: 490 NSLGLEVTNANVTSRTGLVSNVFNVKKRDNEMVQADHVRDSLLE 533
L LEV +A+++ L+ V K N+ D ++ +L E
Sbjct: 541 KELDLEVNHASLSVVNDLMIQQATV-KMGNQFFTQDQLKVALTE 583
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 56/73 (76%), Gaps = 6/73 (8%)
Query: 320 RPRRNGKEPQS------KNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
RPR+ G++P + ++ AER+RR+KLN R YALR++VP I+K+D+A++L DAI Y+
Sbjct: 378 RPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYI 437
Query: 374 KQLQKQEKELKEE 386
K+LQ++ K +++E
Sbjct: 438 KELQEKVKIMEDE 450
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 78/306 (25%)
Query: 215 FLQQFGYSSSSKNVKRHRNDMFF----EGSRD----DSTHQNGIQEMDNASNMNMQFMEP 266
F ++ +S+SS + + R+ EG R D + +G + +N +M E
Sbjct: 345 FSRELNFSTSSSTLVKPRSGEILNFGDEGKRSSGNPDPSSYSGQTQFENKRKRSMVLNED 404
Query: 267 ---NMGNKELQQGNYDDLNKDLIKPDQNNNNNNNGRSDSISDCSDQIDDLEDDVKYRPRR 323
+ G+K + ++ DL ++K E V+ RP++
Sbjct: 405 KVLSFGDKTAGESDHSDLEASVVK--------------------------EVAVEKRPKK 438
Query: 324 NGKEPQSK------NLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQ 377
G++P + ++ AER+RR+KLN R YALRA+VP ++K+D+A++L DAI Y+ +L+
Sbjct: 439 RGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELK 498
Query: 378 KQEKELKEELEENSDDDGAAKNDDMGISVNNH-NAVKSESLTQNGTNFGPKTEPKQCHMG 436
K +K E E+ + + N VK E + + G
Sbjct: 499 S--KVVKTESEK--------------LQIKNQLEEVKLELAGRKASASG----------- 531
Query: 437 NGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEV 496
D S + K ME++V++ G + I+V + RLM AL L LEV
Sbjct: 532 ----GDMSSSCSSIKPVGMEIEVKII---GWDAMIRVESSKRNHPAARLMSALMDLELEV 584
Query: 497 TNANVT 502
+A+++
Sbjct: 585 NHASMS 590
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 334 VAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEENSDD 393
++E+KRR+KLN+R LR+++P I+K+D+ +IL D IEY++ LQK+ +EL E E++D
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQEL-ESCRESAD- 465
Query: 394 DGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTIDKGQ 453
+ I++ E + K + ++G D D
Sbjct: 466 ------TETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTD--- 516
Query: 454 QMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFN 513
+ ++ L GNE I++ C + G + +M+ ++ L L+ + ++ GL+ N
Sbjct: 517 ----NLRISSL-GNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGLLCLTVN 571
Query: 514 VKKRDNEMVQADHVRDSL 531
K + ++ ++++L
Sbjct: 572 CKHKGTKIATTGMIQEAL 589
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 91 LDSGIYAQSLISNQPRWLNFSNSADLEVMEETLW-------TRVLIPIMGGLIELFATKE 143
+ GI +L + +P WL + +AD +V +L T V P +GG++E+ T+
Sbjct: 128 IGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGTTEH 187
Query: 144 VSEDPHVI 151
+ ED +VI
Sbjct: 188 IKEDMNVI 195
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 10/93 (10%)
Query: 308 DQIDDLEDDVKYRPR----RNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRA 363
D+ L D+ K R R NG+E ++ AER+RR+KLN R YALRA+VP I+K+D+A
Sbjct: 293 DETLYLTDEQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKA 352
Query: 364 TILVDAIEYVKQLQKQ------EKELKEELEEN 390
++L DAI Y+ +QK+ EK++ + E N
Sbjct: 353 SLLADAITYITDMQKKIRVYETEKQIMKRRESN 385
Score = 36.6 bits (83), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 67/173 (38%), Gaps = 25/173 (14%)
Query: 7 LMDRLRPLVGLKGWDYCVLWKLSD----DQRFIAWIDCCCAGIEGTQNDD---GDELHFP 59
L LR +V WDY + W S+ D + W D C +G +D DE+
Sbjct: 50 LQQGLRHVVEGSDWDYALFWLASNVNSSDGCVLIWGDGHCRVKKGASGEDYSQQDEIKRR 109
Query: 60 VSPFLPCRDVIFP--HPRTKSCEL-------LSQLPSSMPLDSGIY--AQSLISNQPRW- 107
V L V H KS L L+ L S D+ Y A + +S +P W
Sbjct: 110 VLRKLHLSFVGSDEDHRLVKSGALTDLDMFYLASLYFSFRCDTNKYGPAGTYVSGKPLWA 169
Query: 108 ------LNFSNSADLEVMEETLWTRVLIPIMGGLIELFATKEVSEDPHVIDFI 154
L++ T + +P+ G++EL + + + ED VI+ +
Sbjct: 170 ADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLRHIPEDKSVIEMV 222
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 54/250 (21%)
Query: 285 LIKPDQNNNNNNNGRSDSISDCSDQIDDLEDDVKYRPRRNGKEPQSKNLVAERKRRKKLN 344
LI P N NN + + S + + K R + + SKNL+AER+RRK+LN
Sbjct: 108 LILPASQENTNNYS---PLMEESKSFISIGETNKKRSNKKLEGQPSKNLMAERRRRKRLN 164
Query: 345 DRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEENSDDDGAAKNDDMGI 404
DRL LR++VP ITK+DR +IL DAI+Y+K+L + +L+E+ +E +G
Sbjct: 165 DRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQE------------LGS 212
Query: 405 SVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTIDKGQQMEVQVEVAQL 464
+ + + +ES+ +N F + DQ NT
Sbjct: 213 NSHLSTLITNESMVRNSLKF---------------EVDQREVNT---------------- 241
Query: 465 NGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVT--SRTGLVSNVFNVKKRDNEMV 522
I + C KPG V + L +LGLE+ ++ S L ++ F V ++ MV
Sbjct: 242 -----HIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQ-RYMV 295
Query: 523 QADHVRDSLL 532
++ + +L+
Sbjct: 296 TSEATKQALI 305
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 21/176 (11%)
Query: 326 KEPQ--SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKEL 383
+EP ++++AERKRR+KLN+RL AL AL+P + K D+AT+L DAI+++KQLQ++ K+L
Sbjct: 125 REPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKL 184
Query: 384 KEELEENSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQ 443
+EE K D I + + V + +
Sbjct: 185 EEE-------RVVTKKMDQSIILVKRSQV-----------YLDDDSSSYSSTCSAASPLS 226
Query: 444 DSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNA 499
S + + +Q +E A+++ + I+V CE G ++++ +L LEV N+
Sbjct: 227 SSSDEVSIFKQTMPMIE-ARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNS 281
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 334 VAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEENSDD 393
V E+KRR+KLN+R LR ++P I K+D+ +IL D IEY+++L+++ +EL E E++D
Sbjct: 444 VLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQEL-ESCRESTDT 502
Query: 394 DGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTIDKGQ 453
+ + S + N T G K G + D+G T
Sbjct: 503 ETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNV----GEAEPADTGFT----- 553
Query: 454 QMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVSNVFN 513
+ + + GNE I++ C + G + +M+ ++ L L+ + ++ GL+ N
Sbjct: 554 GLTDNLRIGSF-GNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSSTGDGLLCLTVN 612
Query: 514 VKKRDNEMVQADHVRDSL 531
K + +++ ++++L
Sbjct: 613 CKHKGSKIATPGMIKEAL 630
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 91 LDSGIYAQSLISNQPRWLNFSNSADLEVMEETLW-------TRVLIPIMGGLIELFATKE 143
+ G+ ++ + +P WL +++AD +V +L T V P +GG++E+ T+
Sbjct: 132 IGEGMPGRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGVVEIGTTEH 191
Query: 144 VSEDPHVIDFI 154
++ED +VI +
Sbjct: 192 ITEDMNVIQCV 202
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%), Gaps = 6/75 (8%)
Query: 320 RPRRNGKEPQS------KNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYV 373
RPR+ G+ P + ++ AER+RR+KLN R YALR++VP I+K+D+A++L DA+ Y+
Sbjct: 416 RPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYI 475
Query: 374 KQLQKQEKELKEELE 388
+L + K ++ E E
Sbjct: 476 NELHAKLKVMEAERE 490
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 32/170 (18%)
Query: 332 NLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEENS 391
+++AERKRR+KL R AL ALVP + K+D+A++L DA++++K LQ++ EL+E+ +E
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKE-- 210
Query: 392 DDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTIDK 451
+ + + V + L N +F E D + +D
Sbjct: 211 ------RRLESMVLVKKSKLI----LDDNNQSFSSSCE--------------DGFSDLDL 246
Query: 452 GQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANV 501
E++V + + + IK+ CE + G ++M + L + +TN++V
Sbjct: 247 P---EIEV---RFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSV 290
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 37/208 (17%)
Query: 325 GKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELK 384
G++ ++ AER RR+KLN R YALRA+VP ++K+D+ ++L DA+ Y+ +L+ + + +
Sbjct: 337 GRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENV- 395
Query: 385 EELEENSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQD 444
ELE+++ + + +++ NA+ S K E K M
Sbjct: 396 -ELEKHAIE---IQFNELKEIAGQRNAIPSVC----------KYEEKASEM--------- 432
Query: 445 SGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSR 504
M+++V++ + + ++ +H PG RLM AL L LEV +A+++
Sbjct: 433 ----------MKIEVKIMESDDAMVRVESRKDHHPGA--RLMNALMDLELEVNHASISVM 480
Query: 505 TGLVSNVFNVKKRDNEMVQADHVRDSLL 532
L+ NVK + + + +RD L+
Sbjct: 481 NDLMIQQANVKM-GLRIYKQEELRDLLM 507
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 54/171 (31%)
Query: 332 NLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEENS 391
++VAER+RR+KLN++ LR++VP +TK+D+ +IL D I YV L+K+ EL+
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE------- 416
Query: 392 DDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTIDK 451
N H+ +Q T +
Sbjct: 417 ---------------NTHH-----------------------------EQQHKRTRTCKR 432
Query: 452 GQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVT 502
EV+V + + N+ +++ CE++ G + +++ L+ LG+E T + +
Sbjct: 433 KTSEEVEVSIIE---NDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTS 480
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 30/177 (16%)
Query: 7 LMDRLRPLVGLKGWDYCVLWKLSDDQRFIAWIDCCCAGIEGTQNDD------GDELHFPV 60
L L+ V W Y V W+ QR + W + G T+ +E
Sbjct: 20 LQGLLKTAVQSVDWTYSVFWQFCPQQRVLVWGNGYYNGAIKTRKTTQPAEVTAEEAALER 79
Query: 61 SPFL-PCRDVIFPHPRT---KSCELLSQ-------------LPSSMPLDSGIYAQSLISN 103
S L + + T ++C LS + S P SG+ ++
Sbjct: 80 SQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYARR 139
Query: 104 QPRWLNFSNSADLEVMEETLW-------TRVLIPIMGGLIELFATKEVSEDPHVIDF 153
+ WL+ +N D + + T V IP++ G++EL TK+V ED ++
Sbjct: 140 KHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVEL 196
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 31/171 (18%)
Query: 331 KNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEEN 390
++++AERKRR+KL+++ AL AL+P + K D+ TIL DAI +KQLQ+Q + LKEE E
Sbjct: 119 EHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEAT 178
Query: 391 SDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTID 450
++S L + F + C + DQ
Sbjct: 179 -------------------RQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALP---- 215
Query: 451 KGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANV 501
E++ +++Q N+ I++ CE G + ++ + + L + N+ V
Sbjct: 216 -----EIEAKISQ---NDILIRILCEKSKGCMINILNTIENFQLRIENSIV 258
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 31/168 (18%)
Query: 335 AERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEENSDDD 394
AE++RR+KLN R YALRA+VP ++++D+A++L DA+ Y++ L+
Sbjct: 253 AEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLK----------------- 295
Query: 395 GAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTIDKGQQ 454
+K DD+ + +++ L + +N P + Q + + ++G
Sbjct: 296 --SKIDDLETEIKKMKMTETDKLDNSSSNTSPSSVEYQVNQKPSKS---------NRGSD 344
Query: 455 MEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVT 502
+EVQV++ G E I+V E+ LM AL + V +AN +
Sbjct: 345 LEVQVKIV---GEEAIIRVQTENVNHPTSALMSALMEMDCRVQHANAS 389
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 39/167 (23%)
Query: 330 SKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEE 389
SKNL+AER+RRK+LNDRL LR++VP I+K+DR +IL DAI+Y+K+L + +L++E +E
Sbjct: 177 SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQE 236
Query: 390 NSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTI 449
+ + + + G + + NA +E L +N PK E ++D+D+
Sbjct: 237 LGNSNNSHHSKLFG-DLKDLNA--NEPLVRN----SPKFEID--------RRDEDTR--- 278
Query: 450 DKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEV 496
+ + C KPG + + L +LGLE+
Sbjct: 279 ---------------------VDICCSPKPGLLLSTVNTLETLGLEI 304
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 322 RRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEK 381
R+ +S+ ER+RR NDR + L+ L+P TK+DRA+I+ +AI+Y+K+L + +
Sbjct: 238 RKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIE 297
Query: 382 ELKEELEENSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQ 441
E K +E+ +K V + + ++ N+ P++E Q
Sbjct: 298 EFKMLVEKKRCGRFRSKKR---ARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNNNN 354
Query: 442 DQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANV 501
K + EV V + +E IK+ + K + + L+ L L++ +
Sbjct: 355 SLRCSWLKRKSKVTEVDVRIID---DEVTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAG 411
Query: 502 TSRTGLVSNVFNVKKRDNEMVQADHVRDSLLELTRNPAREWIENV 546
S +FN K + V A + D+L+E+ ++++E V
Sbjct: 412 GQIGEHYSFLFNTKICEGSCVYASGIADTLMEVVE---KQYMEAV 453
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 13/96 (13%)
Query: 295 NNNGRSDS-ISDCSDQIDDLEDDVKYRPRRNGK-EPQSKNLVAERKRRKKLNDRLYALRA 352
NNN + DS I + S +I RR G+ + ++K ER+RR LN+R AL+
Sbjct: 187 NNNAQFDSGIIEFSKEI-----------RRKGRGKRKNKPFTTERERRCHLNERYEALKL 235
Query: 353 LVPIITKLDRATILVDAIEYVKQLQKQEKELKEELE 388
L+P +K DRA+IL D I+Y+ +L+++ ELK +E
Sbjct: 236 LIPSPSKGDRASILQDGIDYINELRRRVSELKYLVE 271
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 26/227 (11%)
Query: 318 KYRPRRNGKEPQSK---NLVAERKRRKKLNDRLYALRALVP--IITKLDRATILVDAIEY 372
+ R + +E +S+ ++ ER RRK++N+ L LR+L+P + + D+A+I+ AIE+
Sbjct: 182 RARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEF 241
Query: 373 VKQLQK-----QEKELKEELEENSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPK 427
V++L++ + ++ + L E D N + +T N T
Sbjct: 242 VRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVT----- 296
Query: 428 TEPKQCHMGNGRKQDQDSGNTIDKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLME 487
+ G G +++ +K +V+V +L G + IK+ +PG ++ +
Sbjct: 297 ----ELEGGGGLREETAE----NKSCLADVEV---KLLGFDAMIKILSRRRPGQLIKTIA 345
Query: 488 ALNSLGLEVTNANVTSRTGLVSNVFNVKKRDNEMVQADHVRDSLLEL 534
AL L L + + N+T+ V FNVK A+ + S+ ++
Sbjct: 346 ALEDLHLSILHTNITTMEQTVLYSFNVKITSETRFTAEDIASSIQQI 392
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 325 GKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELK 384
+PQS + RKRR+++NDRL L++LVP TK+D +T+L DA+ YVK LQ Q K L
Sbjct: 139 ASDPQS---LYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLS 195
Query: 385 EE 386
E
Sbjct: 196 SE 197
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 99/200 (49%), Gaps = 27/200 (13%)
Query: 332 NLVAERKRRKKLNDRLYALRALVP--IITKLDRATILVDAIEYVKQLQKQEKELKEELEE 389
++ ER RRK++N+ L LR+L+P + D+A+I+ AI Y+K+L+ + ++ ++
Sbjct: 127 HIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPVKT 186
Query: 390 NSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTI 449
++D GA H+ K+ S + +G P + ++ +
Sbjct: 187 ATEDTGAG-----------HDQTKTTSASSSG--------PFSDFFAFPQYSNRPTSAAA 227
Query: 450 DKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGLVS 509
+G E++V + + + + +K+ + +P ++L+ ++ SL L + + NVT+R V
Sbjct: 228 AEG-MAEIEVTMVESHAS---LKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSV- 282
Query: 510 NVFNVKKRDNEMVQADHVRD 529
++++ + E Q + V D
Sbjct: 283 -LYSISVKVEEGSQLNTVED 301
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 36/45 (80%)
Query: 333 LVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQ 377
++AERKRR+KL R AL AL+P + K+D+A++L DAI+++K LQ
Sbjct: 128 ILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQ 172
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 88/181 (48%), Gaps = 21/181 (11%)
Query: 332 NLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEENS 391
++++ERKRR+KLN+ L++L+P I ++++A+IL + I Y+K+LQ++ +EL+ E S
Sbjct: 417 HVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREPAS 476
Query: 392 DDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTIDK 451
S N+ +V+ K+ G+ RK + + +++
Sbjct: 477 RPSETTTRLITRPSRGNNESVR-----------------KEVCAGSKRKSPELGRDDVER 519
Query: 452 GQQMEVQVEVA----QLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGL 507
+ + + ++ + ++V C + R+ +A+ SL L+V + ++ G
Sbjct: 520 PPVLTMDAGTSNVTVTVSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQASAPDGF 579
Query: 508 V 508
+
Sbjct: 580 M 580
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 87/181 (48%), Gaps = 21/181 (11%)
Query: 332 NLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKELKEELEENS 391
++++ERKRR+KLN+ L++L+P I ++++A+IL + I Y+K+LQ++ +EL+ E S
Sbjct: 419 HVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREPAS 478
Query: 392 DDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTIDK 451
S N+ +V+ K+ G+ RK + + +++
Sbjct: 479 RPSETTTRLITRPSRGNNESVR-----------------KEVCAGSKRKSPELGRDDVER 521
Query: 452 GQQMEVQVE----VAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGL 507
+ + ++ + ++V C + R+ +A+ SL L+V + ++ G
Sbjct: 522 PPVLTMDAGSSNVTVTVSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQASAPDGF 581
Query: 508 V 508
+
Sbjct: 582 M 582
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 289 DQNNNNNNNGRSDSISDCSDQIDDLEDDVKYRPRRN---GKEPQSKNLVAERKRRKKLND 345
D++N N +G+S +S+ SD VK + R +PQS + RKRR+K+N+
Sbjct: 137 DESNTNWVDGQS--LSNSSDDEKASVTSVKGKTRATKGTATDPQS---LYARKRREKINE 191
Query: 346 RLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKEL 383
RL L+ LVP TK+D +T+L +A+ YVK LQ Q K L
Sbjct: 192 RLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 229
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 334 VAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQ 379
++ER+RR+K+N+ + AL+ L+P TK DR+++L D IEYVK LQ Q
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQ 329
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 39/50 (78%)
Query: 334 VAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKEL 383
++E+KRR K+N+++ AL+ L+P K D+A++L +AIEY+KQLQ Q + L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 313 LEDDVKYRPRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITK-LDRATILVDAIE 371
+ED V +R R +AER RR +++DR+ L+ LVP + K + A +L +A+E
Sbjct: 176 MEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVE 235
Query: 372 YVKQLQKQEKELKEE 386
YVK LQ+Q +EL EE
Sbjct: 236 YVKVLQRQIQELTEE 250
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 335 AERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQ 379
+ERKRR K+N R+ L+ LVP +K D+A++L + IEY+KQLQ Q
Sbjct: 221 SERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQ 265
>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
SV=1
Length = 298
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 317 VKYRPRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQL 376
K +P + K+PQS +A + RR+++++RL L+ LVP TK+D T+L AI YVK L
Sbjct: 194 TKPKPTTSPKDPQS---LAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFL 250
Query: 377 QKQEKEL 383
Q Q K L
Sbjct: 251 QVQVKVL 257
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 36/46 (78%)
Query: 334 VAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQ 379
++ERKRR ++N+R+ AL+ L+P K D+A++L +AIEY+K LQ Q
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQ 336
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 298 GRSDSISDCSDQIDDLEDDVKYRPRRNGK-EPQSKNLVAERKRRKKLNDRLYALRALVPI 356
G DS S D L + K R R +PQS + RKRR+++N+RL L+ LVP
Sbjct: 245 GGEDSSSKEDDPSKALNLNGKTRASRGAATDPQS---LYARKRRERINERLRILQNLVPN 301
Query: 357 ITKLDRATILVDAIEYVKQLQKQEKEL 383
TK+D +T+L +A+ YVK LQ Q K L
Sbjct: 302 GTKVDISTMLEEAVHYVKFLQLQIKLL 328
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 40/50 (80%)
Query: 334 VAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEKEL 383
++E++RR ++N+++ AL++L+P K D+A++L +AIEY+KQLQ Q + L
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 317 VKYRPRRN-GKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQ 375
K R RR +P S +AER RR+++ +R+ AL+ LVP K D+A++L + I+YVK
Sbjct: 136 TKIRARRGQATDPHS---IAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKF 192
Query: 376 LQKQEKEL 383
LQ Q K L
Sbjct: 193 LQLQVKVL 200
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 37/46 (80%)
Query: 334 VAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQ 379
++ER+RR ++N+++ AL+ L+P K+D+A++L +AIEY+K LQ Q
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQ 395
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 317 VKYRPRRNGKEPQSKN--LVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVK 374
V+ +PR + Q+ + +AER RR+++ +R+ +L+ LVP K D+A++L + IEYV+
Sbjct: 93 VRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVR 152
Query: 375 QLQKQEKEL 383
LQ Q K L
Sbjct: 153 FLQLQVKVL 161
>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
GN=BHLH86 PE=4 SV=2
Length = 307
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 317 VKYRPRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQL 376
+K + + K+PQS +A + RR+++++RL L+ LVP TK+D T+L AI YVK L
Sbjct: 200 IKPKATTSPKDPQS---LAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFL 256
Query: 377 QKQEKEL 383
Q Q K L
Sbjct: 257 QVQVKVL 263
>sp|Q8VZ22|BH103_ARATH Transcription factor bHLH103 OS=Arabidopsis thaliana GN=BHLH103
PE=2 SV=1
Length = 301
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 302 SISDC---SDQIDDLEDDVKYRPRRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIIT 358
S++ C S++ +LED +P + + + + + R++KL DR+ AL+ LV
Sbjct: 152 SLTTCKRASEKSGELEDIESSQPLKRPRLETPSHFPSFKVRKEKLGDRITALQQLVSPFG 211
Query: 359 KLDRATILVDAIEYVKQLQKQEKE-LKEELEENSDDDGAAKNDDMGISVNNHN 410
K D A++L DAI+Y+K LQ+Q E + NS G K S N HN
Sbjct: 212 KTDTASVLHDAIDYIKFLQEQITEKVSTSPHLNSIGSGEQKQWSDKSSNNTHN 264
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 38/190 (20%)
Query: 333 LVAERKRRKKLNDRLYALRALVP--IITKLDRATILVDAIEYVKQLQKQEKELK-EELEE 389
+ ER RR+++N L +LR+++P I + D+A+I+ AI++VK L++Q + L+ ++ +
Sbjct: 196 IAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQKRSQ 255
Query: 390 NSDDDGAAKNDDMGISVNNHNAVKSESLTQNGTNFGPKTEPKQCHMGNGRKQDQDSGNTI 449
SDD+ +D + + N +++ K++Q S
Sbjct: 256 QSDDNKEQIPEDNSLRNISSNKLRA-----------------------SNKEEQSS---- 288
Query: 450 DKGQQMEVQVEVAQLNGNEFFIKVFCEHKPGGFVRLMEALNSLGLEVTNANVTSRTGL-V 508
+++++ V + + N +K+ C K G +R + L L V + N+TS T V
Sbjct: 289 ----KLKIEATVIESHVN---LKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSV 341
Query: 509 SNVFNVKKRD 518
S FN+K D
Sbjct: 342 SYSFNLKMED 351
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 318 KYRPRRN-GKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQL 376
K R RR +P S +AER RR+++ +R+ +L+ LVP K D+A++L + I+YVK L
Sbjct: 129 KVRARRGQATDPHS---IAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFL 185
Query: 377 QKQEKELKEELEENSDDDGAAKNDDMGISVNNHNAVKSESLTQN 420
Q Q K L + + ++D G S N ++ +T++
Sbjct: 186 QLQVKVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKMTEH 229
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 334 VAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQ 379
+AER+RR+K+N+++ L+ L+P K + + L DAIEYVK LQ Q
Sbjct: 262 LAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQ 307
>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
SV=1
Length = 328
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 322 RRNGKEPQSKNLVAERKRRKKLNDRLYALRALVPIITKLDRATILVDAIEYVKQLQKQEK 381
R +PQS + RKRR+++N+RL L+ LVP TK+D +T+L +A++YVK LQ Q K
Sbjct: 241 RGAATDPQS---LYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIK 297
Query: 382 EL 383
L
Sbjct: 298 LL 299
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224,055,915
Number of Sequences: 539616
Number of extensions: 9875603
Number of successful extensions: 95877
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 669
Number of HSP's that attempted gapping in prelim test: 58864
Number of HSP's gapped (non-prelim): 19091
length of query: 582
length of database: 191,569,459
effective HSP length: 123
effective length of query: 459
effective length of database: 125,196,691
effective search space: 57465281169
effective search space used: 57465281169
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)