BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045156
(319 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5UNY4|YL728_MIMIV Uncharacterized protein L728 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L728 PE=4 SV=1
Length = 572
Score = 197 bits (501), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 169/290 (58%), Gaps = 19/290 (6%)
Query: 2 LELPEVYMTANKWDLLPYRKVASLAMKVYTKTFMKHDGPR-------------FIKYLTD 48
L++ E+ M+ +++D + + K+ S+A+ F + + + KYL D
Sbjct: 204 LQVLEMLMSTHQYDKIDFSKLPSVALMKMKNAFNRDTNSQGIKSDFRVNLHTSYTKYLQD 263
Query: 49 VKVGKAKISTGALLPHGIIKSVNHETEFALFQVAELQWNRIVDDLSKEGKLRNCKAICDV 108
+ GK K++T + PH ++ ++F Q+ E QW+ I +S G N A+ DV
Sbjct: 264 LSKGKTKVNTKGIQPHELVGQYLSSSDFD--QLVESQWDAIKKGVSDSGTFNNVTAVVDV 321
Query: 109 SGSVHGTPLEVSVALGLLVSELSEEPWKGKLITFGEKPELHLVEGDDLKSKTRFVSNVNW 168
SGS+HG P++V++ALG+LV+E + P+ G++ITF EKP H + G +L K + + + W
Sbjct: 322 SGSMHGQPMQVAIALGILVAECTSGPYHGRVITFHEKPSWHHLTGSNLMEKVKCMRDAPW 381
Query: 169 DMNTDFQEVFDLILEVAVNGNLKPEQMIKRLFVFSDMEFDEASLHPWETDYQAIVRKYTE 228
+T+ + VFDL+L+ A+N LKP +MI LF+F+DM+F++ E+ ++ RK+TE
Sbjct: 382 GGSTNMKSVFDLVLQNAINAKLKPHEMIDTLFIFTDMQFNQCDCSGLESTFEYGQRKFTE 441
Query: 229 KGYGSAVPEIIFWNLR--HSKSTPVPEGQEGVALVSGFSKILIKLFLENE 276
GY P+++ WNLR +SKS P+ + EG ++SGFS L+K + E
Sbjct: 442 AGY--TFPKVVCWNLRTSNSKSLPLMKNDEGYVMLSGFSAELLKCIMNAE 489
>sp|B0C921|GCSH_ACAM1 Glycine cleavage system H protein OS=Acaryochloris marina (strain
MBIC 11017) GN=gcvH PE=3 SV=1
Length = 128
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 74 TEFALFQVAEL---QWNRIVDDLSKE---GKLRNCKAICDVSGSVHGTPLEVSVALGLLV 127
T FA+ Q+ ++ + + D+LS+ G + + KA+ D+ ++GT LE + A+
Sbjct: 30 TAFAIDQLGDIVFIELPEVGDELSQGETMGNIESVKAVEDIYAPINGTVLECNTAIADAP 89
Query: 128 SELSEEPWK 136
+L+E+P+
Sbjct: 90 EQLAEDPYN 98
>sp|O08550|MLL4_MOUSE Histone-lysine N-methyltransferase MLL4 OS=Mus musculus GN=Wbp7 PE=1
SV=3
Length = 2713
Score = 32.0 bits (71), Expect = 6.3, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 208 DEASLHPWETDYQAIVRKYTEKGYGSA---VPEIIFWNLRHSKSTPVPEGQEGVALVSGF 264
D LHP D QA+ +++ E Y S + +++ +RHS+ PE + G +
Sbjct: 1444 DGKQLHPGPCDLQAVGKRFEEGLYKSVHSFMEDVVAILMRHSEEGETPERRAGSQMKGLL 1503
Query: 265 SKILIKLF 272
K+L F
Sbjct: 1504 LKLLESAF 1511
>sp|C6C0W4|TAL_DESAD Probable transaldolase OS=Desulfovibrio salexigens (strain ATCC
14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=tal PE=3
SV=1
Length = 214
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 255 QEGVALVSGFSKILIKLFLENEGVIDQEQVVEAGITENKKKQIDPVQVMEAAISGEEY 312
+E L S ++IK+ + NEG++ E + G+ N P+Q + AA +G Y
Sbjct: 68 REAEDLASFGDNVVIKVPMTNEGLVATESLYRKGVKTNVTLVFSPLQALLAAKAGATY 125
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,123,540
Number of Sequences: 539616
Number of extensions: 4914145
Number of successful extensions: 12723
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 12715
Number of HSP's gapped (non-prelim): 7
length of query: 319
length of database: 191,569,459
effective HSP length: 117
effective length of query: 202
effective length of database: 128,434,387
effective search space: 25943746174
effective search space used: 25943746174
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)