BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045158
(252 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224132636|ref|XP_002327844.1| predicted protein [Populus trichocarpa]
gi|222837253|gb|EEE75632.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/250 (71%), Positives = 215/250 (86%)
Query: 1 MRIIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPI 60
M++IIVA EF+LE+GLQ+PVL+IKR+I+Q+ +P T+Q LAVSGWELVDGLDMEDYPI
Sbjct: 1 MKVIIVAGAREFLLEIGLQDPVLDIKRRIQQLVGVPVTAQILAVSGWELVDGLDMEDYPI 60
Query: 61 VKEGTKIDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTP 120
V +GT+I+LTI P + + + I II+KF +R+ NI+VDRTDTVRSLKEKIHI DGTP
Sbjct: 61 VIDGTRIELTIKPMMPAFSSYCGMIQIIVKFSARQINIEVDRTDTVRSLKEKIHIFDGTP 120
Query: 121 IKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSL 180
IKRM LFFSG+ELD++FRNLSEYGI EFSEI+VFLKTM R+RD+PP R+LS VQTSS L
Sbjct: 121 IKRMSLFFSGVELDEDFRNLSEYGIHEFSEIVVFLKTMTRIRDDPPSRKLSIVVQTSSCL 180
Query: 181 LNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDIL 240
LN A IPLEM+DSSTVN++R LLLS KILP++DY+FIHKQRIMRD+CSLRWHGV+ GD L
Sbjct: 181 LNAACIPLEMKDSSTVNDMRQLLLSRKILPQDDYLFIHKQRIMRDSCSLRWHGVDNGDSL 240
Query: 241 YVFKGTVSRG 250
YVFKGTVSR
Sbjct: 241 YVFKGTVSRS 250
>gi|255577723|ref|XP_002529737.1| protein binding protein, putative [Ricinus communis]
gi|223530778|gb|EEF32644.1| protein binding protein, putative [Ricinus communis]
Length = 255
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/255 (72%), Positives = 214/255 (83%), Gaps = 3/255 (1%)
Query: 1 MRIIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPI 60
MR++IVA EF +EVG QEPVLEIK KIE + + +QTL++ GWELVDGLDMEDYPI
Sbjct: 1 MRVMIVAWAREFPIEVGHQEPVLEIKSKIELLLGVSVAAQTLSIFGWELVDGLDMEDYPI 60
Query: 61 VKEGTKIDLTI---NPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIID 117
V EGTKIDLTI NP L ++ N KI II+KF SR+ NI+VD TDT+RSLKEKIHI+D
Sbjct: 61 VTEGTKIDLTIEPMNPLLFNNGNDTRKIQIIVKFSSRQINIEVDTTDTIRSLKEKIHIVD 120
Query: 118 GTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTS 177
GTPIKR+ LFFSGIELD++FRNLSEYGIREFSEIIVFLKTM+RLRD P R+LS VQTS
Sbjct: 121 GTPIKRLSLFFSGIELDEDFRNLSEYGIREFSEIIVFLKTMSRLRDEPCTRKLSITVQTS 180
Query: 178 SSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYG 237
SSLLN A+IPLEM+DSST+++LR LLLS K+LP +DY+FIHKQRIMRDNCSLRWHGVE G
Sbjct: 181 SSLLNAAAIPLEMKDSSTISDLRRLLLSRKVLPLDDYLFIHKQRIMRDNCSLRWHGVENG 240
Query: 238 DILYVFKGTVSRGGY 252
D LYVFKGTVS GY
Sbjct: 241 DSLYVFKGTVSHNGY 255
>gi|356547071|ref|XP_003541941.1| PREDICTED: polyubiquitin-like [Glycine max]
Length = 249
Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 180/252 (71%), Positives = 206/252 (81%), Gaps = 4/252 (1%)
Query: 1 MRIIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPI 60
MR+ IV ++F +EVG QE V IKRKIEQI IP SQ L VSGWEL+DGLDMEDYPI
Sbjct: 1 MRVAIVTRTNQFFIEVGTQETVAAIKRKIEQILGIPVPSQILTVSGWELLDGLDMEDYPI 60
Query: 61 VKEGTKIDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTP 120
V EGTKIDLTI P K+ I +KF +RKFNI+VDRTDTVRSLKEKIHIID TP
Sbjct: 61 VTEGTKIDLTIKPVEP----HPSKMQITVKFSARKFNIEVDRTDTVRSLKEKIHIIDSTP 116
Query: 121 IKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSL 180
IKRM L+FSG ELD++FR LSEYGIREFSEI+VFLK +NR R+ PP R+LS VQTSSSL
Sbjct: 117 IKRMTLYFSGRELDEDFRILSEYGIREFSEIVVFLKPLNRSREEPPTRKLSLVVQTSSSL 176
Query: 181 LNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDIL 240
LNGA+IPLEM+D+STV++L+ LL+S KILP +DY+FIHKQRIMRD+CSLRWHGVE GD L
Sbjct: 177 LNGATIPLEMRDASTVSDLKQLLISRKILPVDDYLFIHKQRIMRDSCSLRWHGVEDGDCL 236
Query: 241 YVFKGTVSRGGY 252
YVFKGTVSR GY
Sbjct: 237 YVFKGTVSRSGY 248
>gi|225447320|ref|XP_002274095.1| PREDICTED: uncharacterized protein LOC100243083 [Vitis vinifera]
gi|297739303|emb|CBI28954.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 173/252 (68%), Positives = 207/252 (82%)
Query: 1 MRIIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPI 60
MR+II EF +++GLQEPVLEIK KIEQ+ +P QTL+VSGWEL+DGLDMEDYPI
Sbjct: 1 MRVIITTRTCEFSIDIGLQEPVLEIKHKIEQLHGVPVALQTLSVSGWELMDGLDMEDYPI 60
Query: 61 VKEGTKIDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTP 120
V EGT+IDL + KI IIIKF +R+ +I+VDRT+TV SLKEKIHII+GTP
Sbjct: 61 VTEGTRIDLMTKHIEHYPLARCSKIQIIIKFSARQISIEVDRTETVGSLKEKIHIIEGTP 120
Query: 121 IKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSL 180
IKRM+L+FSG E++++FRNLSEYGIREFSEIIVFLK +NR RD PP+R+L+ VQTSSSL
Sbjct: 121 IKRMILYFSGTEMEEDFRNLSEYGIREFSEIIVFLKALNRTRDQPPVRKLNVVVQTSSSL 180
Query: 181 LNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDIL 240
LN A IPLE++D TV+ELR LLL+ KILPR+DY+FIHKQRIMRDNCSLRWHGVE GD L
Sbjct: 181 LNSACIPLELRDMDTVHELRQLLLARKILPRDDYLFIHKQRIMRDNCSLRWHGVEDGDSL 240
Query: 241 YVFKGTVSRGGY 252
YVF+GTVSR G+
Sbjct: 241 YVFRGTVSRNGF 252
>gi|357453489|ref|XP_003597022.1| hypothetical protein MTR_2g088760 [Medicago truncatula]
gi|355486070|gb|AES67273.1| hypothetical protein MTR_2g088760 [Medicago truncatula]
Length = 252
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/252 (69%), Positives = 203/252 (80%), Gaps = 1/252 (0%)
Query: 1 MRIIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPI 60
MRIII ++F +EVG E VLEIKRKIEQI IP Q L V G+EL+DGLDMEDYPI
Sbjct: 1 MRIIIATEINQFFIEVGTLETVLEIKRKIEQIHAIPVAYQILTVCGFELLDGLDMEDYPI 60
Query: 61 VKEGTKIDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTP 120
V EGTKIDLTI P + +K+ I +KF +R NI+VD+TDTV SLKEKIHIID TP
Sbjct: 61 VSEGTKIDLTIKPMEPHIIHHPNKMQITVKFSARLINIEVDKTDTVHSLKEKIHIIDNTP 120
Query: 121 IKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSL 180
IK M LFF G EL+++FRNL+EYGIREFSEIIVFLKT NR ++ PP R+LSF +QTSSSL
Sbjct: 121 IKSMKLFFLGRELNEDFRNLNEYGIREFSEIIVFLKTTNRTKE-PPTRKLSFVLQTSSSL 179
Query: 181 LNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDIL 240
LN A+IPLEM+D+STVN+L+ LLLS KILP +DY+FIH+QRIMRD+CSLRWHGVE GD L
Sbjct: 180 LNAATIPLEMKDTSTVNDLKQLLLSRKILPVDDYLFIHRQRIMRDSCSLRWHGVENGDQL 239
Query: 241 YVFKGTVSRGGY 252
YVFKGTVSR GY
Sbjct: 240 YVFKGTVSRSGY 251
>gi|356542098|ref|XP_003539508.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
Length = 268
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/243 (68%), Positives = 194/243 (79%), Gaps = 4/243 (1%)
Query: 10 HEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDL 69
++F +EVG QE V IKRKIE+I IP SQ L VSGWEL+DGL MEDYPIV EGTK+DL
Sbjct: 29 NQFFIEVGTQETVAAIKRKIEKIHGIPVPSQILTVSGWELLDGLGMEDYPIVTEGTKVDL 88
Query: 70 TINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFS 129
TI P +K+ I KF +RKF+I+VDRTDTVRSLKEKIHIID T IKRM L+FS
Sbjct: 89 TIKPVEP----HPNKMQITEKFSARKFDIEVDRTDTVRSLKEKIHIIDSTLIKRMTLYFS 144
Query: 130 GIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLE 189
G ELD++FR LSEYGIR FSEI VF K +NR R+ PP R+LS VQTSSSLLN A+IPLE
Sbjct: 145 GRELDEDFRILSEYGIRGFSEIAVFXKPLNRSREEPPTRKLSLVVQTSSSLLNAATIPLE 204
Query: 190 MQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSR 249
M+D+STV +L+ LL+S KILP +DY+FIHKQRIMRD+CSLRWHG+E GD LYVFKGTVSR
Sbjct: 205 MRDASTVGDLKQLLISRKILPVDDYLFIHKQRIMRDSCSLRWHGIENGDCLYVFKGTVSR 264
Query: 250 GGY 252
GY
Sbjct: 265 SGY 267
>gi|297789844|ref|XP_002862849.1| hypothetical protein ARALYDRAFT_359335 [Arabidopsis lyrata subsp.
lyrata]
gi|297308597|gb|EFH39107.1| hypothetical protein ARALYDRAFT_359335 [Arabidopsis lyrata subsp.
lyrata]
Length = 242
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 147/242 (60%), Positives = 196/242 (80%), Gaps = 3/242 (1%)
Query: 14 LEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINP 73
+E+ QE VLE+K+++ Q IPA+S TL VS WEL+DGLD+EDYPI+ GT+IDLT+ P
Sbjct: 1 MEISEQESVLEVKKRLGQFLQIPASSLTLFVSCWELIDGLDIEDYPIISHGTRIDLTVTP 60
Query: 74 -FLQSSFNQHD--KIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
F SF KIH+ +KFPS++F ++VDRT+TV SLK+KIHI++ TPIKRM L++SG
Sbjct: 61 LFTAPSFINPAIRKIHVTVKFPSKQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLYYSG 120
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
IEL D++RNL+EYGI EFSEI+VFLK++NR +D P+R+L F VQTSSSL NGA IP+E+
Sbjct: 121 IELADDYRNLNEYGISEFSEIVVFLKSINRAKDVAPVRKLCFLVQTSSSLFNGARIPVEI 180
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRG 250
+D+ T++E+R L ++K LPR++YIF+HKQRIMR+NCSLRWHGVE D L+VFKG++SR
Sbjct: 181 KDTCTISEMREGLQANKTLPRDEYIFVHKQRIMRENCSLRWHGVENCDTLFVFKGSISRE 240
Query: 251 GY 252
GY
Sbjct: 241 GY 242
>gi|145360542|ref|NP_180794.2| ubiquitin-like domain-containing protein [Arabidopsis thaliana]
gi|330253578|gb|AEC08672.1| ubiquitin-like domain-containing protein [Arabidopsis thaliana]
Length = 242
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 144/242 (59%), Positives = 195/242 (80%), Gaps = 3/242 (1%)
Query: 14 LEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINP 73
+E+ QE VLE+K+++ Q IP +S TL VS WEL+DGLD+EDYPI+ GT+IDLT+ P
Sbjct: 1 MEISEQESVLEVKKRLGQFLQIPTSSITLFVSCWELIDGLDIEDYPIISHGTRIDLTVTP 60
Query: 74 FLQSSFNQHD---KIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
+ H KIH+ +KFPS++F ++VDRT+TV SLK+KIHI++ TPIKRM L++SG
Sbjct: 61 LFTAPSFIHAAVRKIHVTVKFPSKQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLYYSG 120
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
IEL D++RNL+EYGI EFSEI+VFLK++NR +D P+R+L F VQTSSSL NGA IP+E+
Sbjct: 121 IELADDYRNLNEYGITEFSEIVVFLKSINRAKDVAPVRKLCFLVQTSSSLFNGARIPVEI 180
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRG 250
+D+ T++E+R L ++K LPR++YIF+HKQRIMR+NCSLRWHGVE GD L+VFKG++SR
Sbjct: 181 KDTCTISEMREGLQANKTLPRDEYIFVHKQRIMRENCSLRWHGVENGDTLFVFKGSISRE 240
Query: 251 GY 252
G+
Sbjct: 241 GF 242
>gi|3831461|gb|AAC69943.1| hypothetical protein [Arabidopsis thaliana]
Length = 233
Score = 300 bits (767), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 139/242 (57%), Positives = 188/242 (77%), Gaps = 12/242 (4%)
Query: 14 LEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINP 73
+E+ QE VLE+K+++ Q IP +S TL VS WEL+DGLD+EDYPI+ GT+IDLT+ P
Sbjct: 1 MEISEQESVLEVKKRLGQFLQIPTSSITLFVSCWELIDGLDIEDYPIISHGTRIDLTVTP 60
Query: 74 FLQSSFNQHD---KIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
+ H KIH+ +KFPS++F ++VDRT+TV SLK+KIHI++ TPIKRM L++SG
Sbjct: 61 LFTAPSFIHAAVRKIHVTVKFPSKQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLYYSG 120
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
IEL D++RNL+EYGI EFSEI+VFLK++NR +D P TSSSL NGA IP+E+
Sbjct: 121 IELADDYRNLNEYGITEFSEIVVFLKSINRAKDVAP---------TSSSLFNGARIPVEI 171
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRG 250
+D+ T++E+R L ++K LPR++YIF+HKQRIMR+NCSLRWHGVE GD L+VFKG++SR
Sbjct: 172 KDTCTISEMREGLQANKTLPRDEYIFVHKQRIMRENCSLRWHGVENGDTLFVFKGSISRE 231
Query: 251 GY 252
G+
Sbjct: 232 GF 233
>gi|449453682|ref|XP_004144585.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
Length = 251
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/254 (57%), Positives = 193/254 (75%), Gaps = 6/254 (2%)
Query: 1 MRIIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDY-P 59
M+I IV GHEF +++ QE ++EIKRKIEQ IP SQTL+V G EL+DGL MEDY
Sbjct: 1 MKIFIVTMGHEFPIDIENQEQIIEIKRKIEQFIGIPIESQTLSVYGCELLDGLVMEDYDQ 60
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGT 119
+ EG++IDL+++ + S ++ I ++F ++ NI++D+T+TV SLK+KI II
Sbjct: 61 FITEGSRIDLSVDQIIAPS----NEFPIAVEFSGQRININIDKTETVHSLKQKIQIIYSL 116
Query: 120 PIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNR-LRDNPPIRRLSFKVQTSS 178
PI+ M LF SG+EL ++ +NLSE+GI EFSE+IVF+KTM+R L ++ R++SF V+ SS
Sbjct: 117 PIQTMSLFHSGMELVEDCQNLSEFGIGEFSEVIVFMKTMSRYLSEDSSRRKVSFVVEMSS 176
Query: 179 SLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGD 238
SLLN A IP+EM+DSSTVN++R LLLS KILP ++Y+FIHKQRIMRD SLRWHGVE GD
Sbjct: 177 SLLNAACIPMEMKDSSTVNDVRELLLSGKILPDDEYLFIHKQRIMRDKRSLRWHGVENGD 236
Query: 239 ILYVFKGTVSRGGY 252
LYVFKGTVSRG +
Sbjct: 237 FLYVFKGTVSRGEF 250
>gi|297823007|ref|XP_002879386.1| hypothetical protein ARALYDRAFT_902287 [Arabidopsis lyrata subsp.
lyrata]
gi|297325225|gb|EFH55645.1| hypothetical protein ARALYDRAFT_902287 [Arabidopsis lyrata subsp.
lyrata]
Length = 196
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 146/184 (79%), Gaps = 3/184 (1%)
Query: 14 LEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINP 73
+E+ QE VLE+K+++ Q IPA+S TL VS WEL+DGLD+EDYPI+ GT+IDLT+ P
Sbjct: 1 MEISEQESVLEVKKRLGQFLQIPASSLTLFVSCWELIDGLDIEDYPIISHGTRIDLTVTP 60
Query: 74 FLQS-SFNQHD--KIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
F + SF KIH+ +KFPS++F ++VDRT+TV SLK+KIHI++ TPIKRM L++SG
Sbjct: 61 FFTAPSFINPAVRKIHVTVKFPSKQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLYYSG 120
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
IEL D++RNL+EYGI EFSEI+VFLK++NR +D P+R+L F VQTSSSL NGA IP+E+
Sbjct: 121 IELADDYRNLNEYGISEFSEIVVFLKSINRAKDVAPVRKLCFLVQTSSSLFNGARIPVEI 180
Query: 191 QDSS 194
+ S
Sbjct: 181 RRRS 184
>gi|215261050|pdb|2KAN|A Chain A, Solution Nmr Structure Of Ubiquitin-Like Domain Of
Arabidopsis Thaliana Protein At2g32350. Northeast
Structural Genomics Consortium Target Ar3433a
Length = 94
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 72/80 (90%)
Query: 84 KIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
KIH+ +KFPS++F ++VDRT+TV SLK+KIHI++ TPIKRM L++SGIEL D++RNL+EY
Sbjct: 15 KIHVTVKFPSKQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLYYSGIELADDYRNLNEY 74
Query: 144 GIREFSEIIVFLKTMNRLRD 163
GI EFSEI+VFLK++NR +D
Sbjct: 75 GITEFSEIVVFLKSINRAKD 94
>gi|255554995|ref|XP_002518535.1| ubiquitin, putative [Ricinus communis]
gi|223542380|gb|EEF43922.1| ubiquitin, putative [Ricinus communis]
Length = 269
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 135/264 (51%), Gaps = 27/264 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G +F +E+G + VLEIK KI++ +IP QTL +G L D D+E Y + + I
Sbjct: 10 GRQFSIELGYFDTVLEIKEKIQKYQDIPINKQTLVFNGQVLQDERDIE-YCEILHNSHIQ 68
Query: 69 LTINP---------FLQSSFNQHDKIHIIIKFPSRKFN--IDVDRTDTVRSLKEKIHIID 117
L I P + S KI + IK PS K + I++D DT+ LKEKIH I+
Sbjct: 69 LLIAPDNDETKPQIKTEESSPPSKKIQLSIKIPSSKLHVPIEMDVNDTILRLKEKIHEIE 128
Query: 118 GTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKT----MNRLRDNPP--IRRLS 171
P+ R++L S EL D R+L E + + SEI V ++ + P ++L
Sbjct: 129 SVPVSRLVLQSSNGELLDN-RSLRESELLDNSEISVNIRPSPTGLGTGSGGPTAGTKKLK 187
Query: 172 FKVQTSSSLLNGASIPLEMQDSSTVNELRHLL--LSSKI---LPREDYIFIHKQRIMRDN 226
V T IP+E+ S V ELR L L ++ LP+E Y FI+KQ +M D+
Sbjct: 188 LMVLTKCGT---QKIPVEVNASDNVGELRKELQKLHQRLHFHLPQEGYFFIYKQNVMDDD 244
Query: 227 CSLRWHGVEYGDILYVFKGTVSRG 250
S RWH V GD + +F G+V+ G
Sbjct: 245 RSFRWHHVCQGDTIEIFNGSVTGG 268
>gi|357462215|ref|XP_003601389.1| hypothetical protein MTR_3g080180 [Medicago truncatula]
gi|355490437|gb|AES71640.1| hypothetical protein MTR_3g080180 [Medicago truncatula]
Length = 265
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
Query: 3 IIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVK 62
I V G F +EVG + +LEIK KI++ IP + QTL +G L + D+ I
Sbjct: 4 IFEVQRGRPFSIEVGFFDTILEIKEKIQKYQGIPISKQTLIFNGQILPEDGDIWKCAIF- 62
Query: 63 EGTKIDLTINPFLQSSFNQ---HDKIHIIIKFPSRK--FNIDVDRTDTVRSLKEKIHIID 117
+ ++I L + Q K+H+ IK PS K F I++ + DTV LKEKIH ID
Sbjct: 63 QNSRIHLIVTASESDHHKQPIEDTKLHLNIKTPSSKPYFPIEIYKNDTVLKLKEKIHDID 122
Query: 118 --GTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPI------RR 169
P+ +++L + EL D + + + + + SEI V K +P + ++
Sbjct: 123 QNNVPLNQLMLHAADTELHDN-QLIRDCDVSDKSEIEVSFKPPAGPAVSPTMVGGGGSKK 181
Query: 170 LSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL--LSSKI---LPREDYIFIHKQRIMR 224
L F V + S IP+EM + V ELR L ++ ++ LP+E Y FI KQ +M
Sbjct: 182 LKFMVLSKSGT---KKIPVEMNATDNVGELRKELQKMNQRLQFHLPQEGYFFIFKQNVMD 238
Query: 225 DNCSLRWHGVEYGDILYVFKGTVSRG 250
D S RWH V GD + +F G+V+ G
Sbjct: 239 DEKSFRWHHVCQGDTIEIFNGSVTGG 264
>gi|225444387|ref|XP_002265032.1| PREDICTED: uncharacterized protein LOC100252194 [Vitis vinifera]
Length = 284
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 133/288 (46%), Gaps = 43/288 (14%)
Query: 1 MRIIIVANGHE-FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDM---- 55
M +I G E F LE+G + VLEIK K+++ IPA+ QTL +G L D D+
Sbjct: 1 MDVIFEPQGGEPFSLELGFFDTVLEIKEKVQKYHGIPASRQTLFFNGHLLQDNRDIPSMQ 60
Query: 56 --------------------------EDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIII 89
ED P + P KI I++
Sbjct: 61 MFYNCRIQMIISPDPPSEMPPPLINIEDSPPPNNLQEDPSPPPPPPLPPPPPSTKIQILL 120
Query: 90 KFPSRK--FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIRE 147
+ P+ K +I++D TV LKEKIH ++G P+ RM+L++ G EL D R+L + + +
Sbjct: 121 RIPTSKIHLSIEMDLAHTVGRLKEKIHEMEGIPVNRMVLYWRGRELQDS-RSLRDCELSD 179
Query: 148 FSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL--LS 205
SEI V +K + + +RL V + +P+E+ V ELR L L
Sbjct: 180 RSEIDVGIKPLPAASGSGS-KRLKLMVMSKCGT---KKVPVEVNPLDNVGELRKELEKLD 235
Query: 206 SKI---LPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRG 250
+ LP E Y FI+KQ +M D+ S RWH V GD + +F G V+ G
Sbjct: 236 QRFQFHLPPEGYFFIYKQNVMDDDRSFRWHHVGQGDTVEIFNGCVTGG 283
>gi|224078748|ref|XP_002305613.1| predicted protein [Populus trichocarpa]
gi|222848577|gb|EEE86124.1| predicted protein [Populus trichocarpa]
Length = 260
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 129/254 (50%), Gaps = 21/254 (8%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G F +EVG + V EIK K+ + IP QTL G L D D+E Y + + ++I
Sbjct: 10 GGPFSIEVGFFDTVSEIKEKVHKYHGIPINKQTLVFHGQVLQDDKDVE-YCEILQNSRIQ 68
Query: 69 LTINP---------FLQSSFNQHDKIHIIIKFPSRK--FNIDVDRTDTVRSLKEKIHIID 117
L I P Q+S ++ K+ + IK PS + +++D +DTV LKEKI I+
Sbjct: 69 LLITPETDQIPQDKVEQTSHSK--KVQLRIKIPSNQTLVPLEMDMSDTVLHLKEKIREIE 126
Query: 118 GTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTS 177
P+KR++L +G EL D ++L E ++ SEI V +K + K++
Sbjct: 127 PVPVKRLVLQSNGAELQDH-QSLHECELKYNSEISVNVKPSPSGSGSKGGSTGFKKLRVI 185
Query: 178 SSLLNGAS-IPLEMQDSSTVNELRHLL--LSSK---ILPREDYIFIHKQRIMRDNCSLRW 231
G IP+E+ S V ELR L L K LP+E Y FIHKQ +M D+ S RW
Sbjct: 186 VVTKCGTKKIPVEVNPSDNVGELRKELQDLQQKNQFHLPQEGYFFIHKQDVMDDDRSFRW 245
Query: 232 HGVEYGDILYVFKG 245
H V GD + VF G
Sbjct: 246 HRVNQGDTIDVFNG 259
>gi|147781462|emb|CAN76119.1| hypothetical protein VITISV_033883 [Vitis vinifera]
Length = 284
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 132/288 (45%), Gaps = 43/288 (14%)
Query: 1 MRIIIVANGHE-FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDM---- 55
M +I G E F LE+G + VLEIK K+++ IPA+ QTL +G L D D+
Sbjct: 1 MDVIFEPQGGEPFSLELGFFDTVLEIKEKVQKYHGIPASRQTLFFNGHLLQDNRDIPSMQ 60
Query: 56 --------------------------EDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIII 89
ED P + P KI I++
Sbjct: 61 MFYNCRIQMIISPDPPSEMPPPLINIEDSPPPNNLQEDPSPPPPPPLPPPPPSTKIQILL 120
Query: 90 KFPSRK--FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIRE 147
+ P+ K +I++D TV LKEKIH ++ P+ RM+L++ G EL D R+L + + +
Sbjct: 121 RIPTSKIHLSIEMDLAHTVGRLKEKIHEMEXIPVNRMVLYWRGRELQDS-RSLRDCELSD 179
Query: 148 FSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL--LS 205
SEI V +K + + +RL V + +P+E+ V ELR L L
Sbjct: 180 RSEIDVGIKPLPAASGSGS-KRLKLMVMSKCGT---KKVPVEVNPLDNVGELRKELEKLD 235
Query: 206 SKI---LPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRG 250
+ LP E Y FI+KQ +M D+ S RWH V GD + +F G V+ G
Sbjct: 236 QRFQFHLPPEGYFFIYKQNVMDDDRSFRWHHVGQGDTVEIFNGCVTGG 283
>gi|356577793|ref|XP_003557007.1| PREDICTED: uncharacterized protein LOC100790784 [Glycine max]
Length = 267
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 136/273 (49%), Gaps = 28/273 (10%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M II + G F +EVG + VLEIK K+++ NIP + Q L ++G L D D
Sbjct: 1 MNIIFELQGGRSFSMEVGYFDTVLEIKEKVQKYQNIPVSKQILILNGQVLHDNDDPWKVE 60
Query: 60 IVKEGTKIDLTINPFLQSSF------NQHDKIHIIIKFPSRK----FNIDVDRTDTVRSL 109
I+ T+I L + P + + + H KI + +K S+ +DV+ DTV L
Sbjct: 61 IL-HNTRIQLQVTPKKEENSKDLVVNSTHTKIQLNVKTASKTHVIPLEVDVN-NDTVLRL 118
Query: 110 KEKIHIID--GTPIKRMLLFFS--GIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNP 165
KE+IH ++ P+ R+L S G+E+ D + L + + E +EI V + +
Sbjct: 119 KERIHEMETVAVPVNRLLFLHSSNGVEMLDH-QLLRDCYVSENAEIDVGFRPSPPAAASA 177
Query: 166 PI--RRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL--LSSKI---LPREDYIFIH 218
+RL V S +P+E+ S V ELR L L ++ LP++ Y FI+
Sbjct: 178 SPGSKRLKLMVLPKSGT---KKVPVEVNPSDNVGELRKELQKLHQRVQFHLPQDGYFFIY 234
Query: 219 KQRIMRDNCSLRWHGVEYGDILYVFKGTVSRGG 251
KQ +M D+ S RWH V GD + +F G+V+ G
Sbjct: 235 KQNVMDDDRSFRWHHVAQGDTIEIFNGSVTGGS 267
>gi|302144066|emb|CBI23171.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 113/256 (44%), Gaps = 59/256 (23%)
Query: 1 MRIIIVANGHE-FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M +I G E F LE+G + VLEIK K+++ IPA+ QTL +G L D D+
Sbjct: 1 MDVIFEPQGGEPFSLELGFFDTVLEIKEKVQKYHGIPASRQTLFFNGHLLQDNRDIPSMQ 60
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGT 119
I+ KIH+ +I++D TV LKEKIH ++G
Sbjct: 61 IIPTS-------------------KIHL---------SIEMDLAHTVGRLKEKIHEMEGI 92
Query: 120 PIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSS 179
P+ RM+L++ G EL D LRD RL V +
Sbjct: 93 PVNRMVLYWRGRELQDS----------------------RSLRDCELSDRLKLMVMSKCG 130
Query: 180 LLNGASIPLEMQDSSTVNELRHLL--LSSKI---LPREDYIFIHKQRIMRDNCSLRWHGV 234
+P+E+ V ELR L L + LP E Y FI+KQ +M D+ S RWH V
Sbjct: 131 T---KKVPVEVNPLDNVGELRKELEKLDQRFQFHLPPEGYFFIYKQNVMDDDRSFRWHHV 187
Query: 235 EYGDILYVFKGTVSRG 250
GD + +F G V+ G
Sbjct: 188 GQGDTVEIFNGCVTGG 203
>gi|225439205|ref|XP_002270133.1| PREDICTED: polyubiquitin [Vitis vinifera]
gi|147834449|emb|CAN76405.1| hypothetical protein VITISV_042107 [Vitis vinifera]
Length = 265
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 32/263 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIV------ 61
+G F +EVG + VLEIK KI++ NIP +QTL +G L D ++ +V
Sbjct: 9 SGEGFCIEVGFFDTVLEIKEKIQKYQNIPVAAQTLIFNGEVLQDESNVHSSDLVHNSYIQ 68
Query: 62 -------KEGTKIDLTINPFLQSSFNQHDKIHIIIKFP---SRKFNIDVDRTDTVRSLKE 111
K TK + + P L + + ++ ++I P S++F + + T+R LKE
Sbjct: 69 LISSCPEKPATKAESS--PPLSPAAS---RVQLLINIPTSKSQQFPLCMHSRGTIRELKE 123
Query: 112 KIH-IIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRL 170
IH +++ +++++L+ G EL D + +L + G+ + SEI V M + ++L
Sbjct: 124 NIHAVMETLCVQQLVLYSDGSELQDHW-SLHQSGLSDGSEIDVGF--MAGAMGSSCFKKL 180
Query: 171 SFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSK-----ILPREDYIFIHKQRIMRD 225
KV G +E+ S V LR L + LP++ Y FI+K+ +M +
Sbjct: 181 --KVMVVLPRCGGKKTAVEVNGSDKVRVLRMELDKLQKCLQFYLPKDGYYFIYKEHVMDE 238
Query: 226 NCSLRWHGVEYGDILYVFKGTVS 248
+ S RWH V GD + + ++S
Sbjct: 239 DRSFRWHHVGQGDTIDISPTSIS 261
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Query: 91 FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFR-NLSEYGIREFS 149
F F I+V DTV +KEKI P+ L F+G L DE + S+ +
Sbjct: 8 FSGEGFCIEVGFFDTVLEIKEKIQKYQNIPVAAQTLIFNGEVLQDESNVHSSDLVHNSYI 67
Query: 150 EIIVFL--KTMNRLRDNPPIRRLSFKVQTSSSLLNGAS--IPLEMQDSSTVNELR---HL 202
++I K + +PP+ + +VQ ++ S PL M T+ EL+ H
Sbjct: 68 QLISSCPEKPATKAESSPPLSPAASRVQLLINIPTSKSQQFPLCMHSRGTIRELKENIHA 127
Query: 203 LLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYG 237
++ + L + + ++D+ SL G+ G
Sbjct: 128 VMET--LCVQQLVLYSDGSELQDHWSLHQSGLSDG 160
>gi|297809715|ref|XP_002872741.1| hypothetical protein ARALYDRAFT_490171 [Arabidopsis lyrata subsp.
lyrata]
gi|297318578|gb|EFH49000.1| hypothetical protein ARALYDRAFT_490171 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 103/250 (41%), Gaps = 61/250 (24%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
+G F +E+G + VLEIK+KIE+ IP + QTL G L D LD+E I+
Sbjct: 9 SGFTFEIELGYWDTVLEIKQKIEKYQQIPVSKQTLFFQGNVLQDHLDIEQCVILN----- 63
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
H +I + I P + N V +T+ K I + ++
Sbjct: 64 --------------HSRIQLFISSPDQNRNNQVFKTEQSPQSNSKEQITNNGHQDSPVMM 109
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
++ + L ++V K R IP
Sbjct: 110 PMSNNNNNNPKKL---------RVMVLPKCGTR------------------------KIP 136
Query: 188 LEMQDSSTVNELRHLLLSSKI-------LPREDYIFIHKQRIMRDNCSLRWHGVEYGDIL 240
+E+ V ELR L +KI LP+E Y FI+KQ +M +N S RWH V++GD +
Sbjct: 137 VEVNAGDNVGELRKEL--AKIQQRLQLSLPQEGYFFIYKQNVMDENRSFRWHRVDHGDTI 194
Query: 241 YVFKGTVSRG 250
+F G+VS G
Sbjct: 195 EIFNGSVSGG 204
>gi|392569337|gb|EIW62510.1| ubiquitin 10.1 [Trametes versicolor FP-101664 SS1]
Length = 463
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 18/236 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIKF-PSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + L+ +F D + I +K+ R ++V +DT+ +K KI I+G R L
Sbjct: 295 -LHLVLRLRGAFRVLDSMQIFVKWLHGRTITLEVRSSDTIDDVKAKIQEIEGISPDRQRL 353
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+ +LDD R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 354 IFASKQLDD-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 399
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 400 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 455
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
+G LEV + + ++K KI++I I Q L + +L DG + DY I KE T
Sbjct: 319 HGRTITLEVRSSDTIDDVKAKIQEIEGISPDRQRLIFASKQLDDGRTLSDYNIQKEST-- 376
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 377 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 429
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 430 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 458
>gi|302393778|sp|P42739.2|UBIQP_ACECL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related 1; Contains:
RecName: Full=Ubiquitin-related 2; Flags: Precursor
gi|433970|emb|CAA82268.1| polyubiquitin [Acetabularia peniculus]
Length = 423
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + V +K KI+ IP Q L +G +L DGL + DY I KE T
Sbjct: 50 TGKTITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYNIQKEST-- 107
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DTV ++K KI +G P + L
Sbjct: 108 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRL 160
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 161 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 206
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S TV ++ + + +P + I + + D +L + ++ L++
Sbjct: 207 TLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 262
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + V +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 278 TGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 335
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DTV ++K KI +G P + +
Sbjct: 336 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRI 388
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 389 IFAGKQLED-GRTLADYNIQKESTLHLVLR 417
>gi|302847323|ref|XP_002955196.1| polyubiquitin [Volvox carteri f. nagariensis]
gi|300259488|gb|EFJ43715.1| polyubiquitin [Volvox carteri f. nagariensis]
Length = 229
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 30/247 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR + KV+T L G I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGG-----MMIKVKT----LTGKEI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFK 244
++++ S T+ ++ + + +P ++ IF KQ M D+ + + +E G +L++
Sbjct: 166 EIDIEPSDTIERIKERVEEKEGIPPVQQRLIFAGKQ--MNDDKQAKDYNIEGGSVLHLV- 222
Query: 245 GTVSRGG 251
RGG
Sbjct: 223 -LALRGG 228
>gi|350420431|ref|XP_003492506.1| PREDICTED: polyubiquitin-like [Bombus impatiens]
Length = 471
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 16/237 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPP-IRRLSFKVQTSSSLLNGAS 185
F+G +L+D R LS+Y I++ S + + L RLR + RL +Q L G +
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGGSHLVLRLRGGMQIFVKTLTGKT 402
Query: 186 IPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 403 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 459
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|56684130|gb|AAW22168.1| polyubiquitin [Monocercomonoides sp. PA203]
Length = 229
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG ++DY I KE T
Sbjct: 9 TGKTITLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYNIQKEAT-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ DT+ S+K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVENADTIESVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L +Y I++ + + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLQDYNIQKEATLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++++ T+ ++ + + +P + I + + D +L+ + ++ L++
Sbjct: 166 TLEVENADTIESVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYNIQKEATLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|336271700|ref|XP_003350608.1| hypothetical protein SMAC_07925 [Sordaria macrospora k-hell]
gi|380089527|emb|CCC12626.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|85091236|ref|XP_958803.1| polyubiquitin [Neurospora crassa OR74A]
gi|302595953|sp|P0CG70.1|UBI4P_NEUCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|295930|emb|CAA31530.1| ubiquitin [Neurospora crassa]
gi|28920189|gb|EAA29567.1| polyubiquitin [Neurospora crassa OR74A]
gi|336466506|gb|EGO54671.1| polyubiquitin [Neurospora tetrasperma FGSC 2508]
gi|350286609|gb|EGZ67856.1| polyubiquitin [Neurospora tetrasperma FGSC 2509]
Length = 305
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|307110244|gb|EFN58480.1| hypothetical protein CHLNCDRAFT_48528 [Chlorella variabilis]
Length = 229
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR + KV+T L G I
Sbjct: 120 VFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGG-----MMIKVKT----LTGKEI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
++++ + TV ++ + + +P I + M D+ + + +E G +L++
Sbjct: 166 EIDIEPTDTVQRIKERVEEKEGIPPVQQRLIFAGKAMNDDKMAKDYNIEGGSVLHLV--L 223
Query: 247 VSRGG 251
RGG
Sbjct: 224 ALRGG 228
>gi|226498364|ref|NP_001150859.1| ubiquitin family protein [Zea mays]
gi|195642426|gb|ACG40681.1| ubiquitin family protein [Zea mays]
gi|413934534|gb|AFW69085.1| ubiquitin family protein [Zea mays]
Length = 268
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 22/263 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMED------YPIV 61
G EF LEV V E+K + IP SQ ++G E DGL+++D Y IV
Sbjct: 9 GGREFTLEVWYFATVREMKEAVHVREGIPVASQRFFLAGQE-DDGLELDDARDTAHYGIV 67
Query: 62 KEGTKIDLTI--NPFLQSSFNQHDKIHIIIKFPSRKFNI----DVDRTDTVRSLKEKIHI 115
+ G+++ L + + +S +H+ + P DV +DTV LKE +
Sbjct: 68 Q-GSRVLLLLRDDAPPSASPAPATAVHVTVSAPEIGLCSVALDDVPTSDTVARLKELLQD 126
Query: 116 -IDGT-PIKRMLLFFSGIELDDEFRNLSEYGI-REFSEIIVFLKTMNRLRDNPPIRRLSF 172
DG I R +LF E++D + L+EY + ++ ++ + S
Sbjct: 127 RTDGALSIARTVLFLGKTEMEDG-KTLAEYDPPADGMDLSAVVRQQPLVASGGGAEARSQ 185
Query: 173 KVQTSSSLLNGASIPLEMQDSSTVNELR----HLLLSSKILPREDYIFIHKQRIMRDNCS 228
+ S + + LE+ + V +LR L L + +Y F++KQ +M ++ +
Sbjct: 186 QRIEVSVMFGETVVALEVGATDVVRDLRKEVERLHLPVRDSSGNEYFFVYKQNVMDEDRT 245
Query: 229 LRWHGVEYGDILYVFKGTVSRGG 251
LRWH V+ GD + +F GTV+ G
Sbjct: 246 LRWHEVKNGDTIEIFNGTVTGGA 268
>gi|27734398|gb|AAM51223.1| polyubiquitin [Bigelowiella natans]
gi|27734402|gb|AAM51224.1| polyubiquitin [Bigelowiella natans]
Length = 306
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 22/236 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 11 TGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 68
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + L+ + I +K + +DVD +DT+ ++K+KI +G P + L
Sbjct: 69 -LHLVLRLRGG-----SMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRL 122
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR +Q L G +I
Sbjct: 123 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGS--------MQIFVKTLTGKTI 169
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L++ S T+N ++ + + +P + I + + D +L + ++ L++
Sbjct: 170 TLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 225
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 10/150 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 165 TGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 222
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + L+ + I +K + +DVD +DT+ ++K+KI +G P + L
Sbjct: 223 -LHLVLRLRGG-----SMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRL 276
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 277 IFAGKQLED-GRTLADYNIQKESTLHLVLR 305
>gi|27734407|gb|AAM51225.1| polyubiquitin [Bigelowiella natans]
Length = 320
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 22/236 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 11 TGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 68
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + L+ + I +K + +DVD +DT+ ++K+KI +G P + L
Sbjct: 69 -LHLVLRLRGG-----SMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRL 122
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR +Q L G +I
Sbjct: 123 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGS--------MQIFVKTLTGKTI 169
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L++ S T+N ++ + + +P + I + + D +L + ++ L++
Sbjct: 170 TLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 225
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 10/150 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 165 TGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 222
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + L+ + I +K + +DVD +DT+ ++K+KI +G P + L
Sbjct: 223 -LHLVLRLRGG-----SMQIFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRL 276
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 277 IFAGKQLED-GRTLADYNIQKESTLHLVLR 305
>gi|19698785|gb|AAL91103.1| ubiquitin [Acanthocheilonema viteae]
Length = 258
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 38 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 95
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 96 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 148
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 149 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 194
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 195 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 252
Query: 247 VSRGGY 252
RGGY
Sbjct: 253 RLRGGY 258
>gi|70993888|ref|XP_751791.1| polyubiquitin UbiD/Ubi4 [Aspergillus fumigatus Af293]
gi|66849425|gb|EAL89753.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus Af293]
gi|159125290|gb|EDP50407.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus fumigatus A1163]
Length = 314
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 15/236 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-K 66
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 67 IDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
+ L + +Q I ++ + ++V+ +DT+ ++K KI +G P + L
Sbjct: 69 LVLRLRGGMQIWSPADSLITVVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 128
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 129 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 174
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 175 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 230
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 24/241 (9%)
Query: 3 IIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVK 62
++ G LEV + + +K KI+ IP Q L +G +L DG + DY I K
Sbjct: 89 VVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 148
Query: 63 EGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPI 121
E T L + I +K + ++V+ +DT+ ++K KI +G P
Sbjct: 149 EST---------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP 199
Query: 122 KRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLL 181
+ L F+G +L+D R LS+Y I++ S + + L RL +Q L
Sbjct: 200 DQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTL 245
Query: 182 NGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILY 241
G +I LE++ S T++ ++ + + +P + I + + D +L + ++ L+
Sbjct: 246 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 305
Query: 242 V 242
+
Sbjct: 306 L 306
>gi|444434925|dbj|BAM77037.1| ubiquitin C [Homo sapiens]
Length = 685
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV L + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVELSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 424 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 469
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 470 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVELSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 28/238 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P ++ IF KQ + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQ--LEDGRTLSDYSIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 598
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 599 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 651
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 652 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 680
>gi|2894308|emb|CAA11269.1| polyubiquitin [Nicotiana tabacum]
Length = 381
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|156358391|ref|XP_001624503.1| predicted protein [Nematostella vectensis]
gi|156211288|gb|EDO32403.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + FI + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|226484025|emb|CAX79681.1| ubiquitin C [Schistosoma japonicum]
Length = 229
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +GTP + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGTPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|126352454|ref|NP_001075331.1| ubiquitin C [Equus caballus]
gi|302393801|sp|Q8MKD1.3|UBB_HORSE RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|21070215|gb|AAM34211.1|AF506969_1 ubiquitin [Equus caballus]
Length = 305
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + FI + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|440798058|gb|ELR19129.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 229
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|297805150|ref|XP_002870459.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|297316295|gb|EFH46718.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
Length = 537
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KIE IP Q L +G +L DG + DY I KE T
Sbjct: 164 TGKTITLEVESSDTIDNVKAKIEDKEGIPTDQQRLIFAGKQLEDGRTLADYNIQKEST-- 221
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ +LK KI +G P + L
Sbjct: 222 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRL 274
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 275 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGRTI 320
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 321 TLEVESSDTIDNVKAKIQDKEEIPADQQRLIFAGKQLEDGRTLADYNIQKESTLHL 376
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 111/238 (46%), Gaps = 28/238 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IPA Q L +G +L DG + DY I KE T
Sbjct: 316 TGRTITLEVESSDTIDNVKAKIQDKEEIPADQQRLIFAGKQLEDGRTLADYNIQKEST-- 373
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 374 -------LHLVLRLCGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 426
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 427 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 472
Query: 187 PLEMQDSSTVNELRHLLLSSK-ILP-REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + I+P ++ IF KQ + D +L + ++ L++
Sbjct: 473 TLEVESSDTIDNVKAKIQDKEGIVPDQQRLIFAGKQ--LEDGRTLADYNIQKESTLHL 528
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ I Q L +G +L DG + DY I KE T
Sbjct: 88 TGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 145
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 146 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIEDKEGIPTDQQRL 198
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 199 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 244
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ L+ + + +P + I + + D +L + ++ L++
Sbjct: 245 TLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 300
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K +I+ IP Q L +G +L DG + DY I KE L +
Sbjct: 29 VKAQIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKE---------SILHLALRLRGG 79
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G + L F+G +L+D R L++Y
Sbjct: 80 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQRLIFAGKQLED-GRTLADY 138
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I LE++ S T++ ++ +
Sbjct: 139 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 185
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + D +L + ++ L++
Sbjct: 186 EDKEGIPTDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 224
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 91 FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSE 150
+ +D + + T+ ++K +I +G P+ + L F+G +L+D R L++Y I++ S
Sbjct: 11 LTEKTITLDAESSYTINNVKAQIQDKEGIPLDQQRLIFAGKQLED-GRTLADYNIQKESI 69
Query: 151 IIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSK-IL 209
+ + L RL +Q L G +I LE++ S T++ ++ + + IL
Sbjct: 70 LHLAL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIL 116
Query: 210 P-REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
P ++ IF KQ + D +L + ++ L++
Sbjct: 117 PDQQRLIFAGKQ--LEDGRTLADYNIQKESTLHL 148
>gi|170583349|ref|XP_001896539.1| ubiquitin [Brugia malayi]
gi|158596243|gb|EDP34630.1| ubiquitin, putative [Brugia malayi]
Length = 307
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 113/238 (47%), Gaps = 26/238 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IPA Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DTV ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVETSDTVENVKAKIQDKEGIPPGQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RLR L V+T +S+ +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGG-----LQIFVKTLTSM----TI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P ++ IF K++ + D + + ++ L++
Sbjct: 166 TLEVETSDTIENVKAKVQDKEGIPPDQQRLIFAGKRKQLEDGRTFSDYNIQKESTLHL 223
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGW--ELVDGLDMEDYPIVKEGTKIDL 69
LEV + + +K K++ IP Q L +G +L DG DY I KE T
Sbjct: 165 ITLEVETSDTIENVKAKVQDKEGIPPDQQRLIFAGKRKQLEDGRTFSDYNIQKEST---- 220
Query: 70 TINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFF 128
L + I +K + ++V+ +DT+ ++K KI +G P + L F
Sbjct: 221 -----LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 275
Query: 129 SGIELDDEFRNLSEYGIREFSEIIVFLK 156
+G +L+D R LS+Y I++ S + + L+
Sbjct: 276 AGKQLED-GRTLSDYNIQKESTLHLVLR 302
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT 65
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 239 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 296
>gi|222615849|gb|EEE51981.1| hypothetical protein OsJ_33659 [Oryza sativa Japonica Group]
Length = 263
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 39/267 (14%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G F +E+ V IK + + IP SQ L +G EL D D E Y I++ T +
Sbjct: 10 GRRFTVEIWFFSTVRRIKEYVLRQEGIPVESQRLFFAGAELDDDGDTERYSILQGSTVLL 69
Query: 69 L---------TINPFLQSSFNQHDKIHIIIKFPSR------KFNIDVDRTD-TVRSLKEK 112
L + + +++ P+ ++VD TV LKE+
Sbjct: 70 LLPEDGAAPPSSGGGGGGGGGTKAMVRVVVNAPAALAGKGGAVTVEVDAAACTVAGLKER 129
Query: 113 IH-IIDGT-PIKRMLLFFSGIELDDEFRNLSEY---GIREFSEIIVFLKTMNRLRDNPPI 167
+ DG P R+ L F +E++D R ++EY G V + +
Sbjct: 130 VQEGTDGALPAARVALMFGKVEMEDG-RAVAEYVPPGAAADGTATVVVSAVQP------- 181
Query: 168 RRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKI---LPRED-YIFIHKQRIM 223
R++ V+ + + +E+ D V +LR L + LP++ Y FI+KQ +M
Sbjct: 182 -RVTVNVKWGAK-----AAAVEVSDMLAVKDLRAELGGAAAHLPLPKDGGYFFIYKQNVM 235
Query: 224 RDNCSLRWHGVEYGDILYVFKGTVSRG 250
++ +LRWH V+ GD + +F G V+ G
Sbjct: 236 EEDRTLRWHDVKNGDTIEIFNGRVTGG 262
>gi|355568283|gb|EHH24564.1| Polyubiquitin-C [Macaca mulatta]
Length = 229
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RLS +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLSGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|195337251|ref|XP_002035242.1| GM14032 [Drosophila sechellia]
gi|194128335|gb|EDW50378.1| GM14032 [Drosophila sechellia]
Length = 915
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + N++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTINLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 849
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 850 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905
>gi|302595947|sp|P0CG73.1|UBI1P_CANAL RecName: Full=Polyubiquitin; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
gi|1143188|gb|AAA84868.1| ubiquitin precursor [Candida albicans]
Length = 229
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRSRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|195399337|ref|XP_002058277.1| GJ16000 [Drosophila virilis]
gi|194150701|gb|EDW66385.1| GJ16000 [Drosophila virilis]
Length = 457
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 451
Query: 247 VSRGGY 252
RGGY
Sbjct: 452 RLRGGY 457
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|12833702|dbj|BAB22630.1| unnamed protein product [Mus musculus]
Length = 229
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGGY
Sbjct: 224 RLRGGY 229
>gi|15284030|dbj|BAB63443.1| ubiquitin 2 [Physarum polycephalum]
gi|19909902|dbj|BAB87824.1| polyubiquitin [Physarum polycephalum]
Length = 229
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ S+K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|440796241|gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 35/237 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIII--KFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRML 125
+H+I + ++V+ +DT+ ++K+KI +G P +
Sbjct: 67 -----------------LHLIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQR 109
Query: 126 LFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGAS 185
L F+G +L+D R L++Y I++ S + + L RL +Q L G +
Sbjct: 110 LIFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKT 155
Query: 186 IPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 156 ITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 212
>gi|15284032|dbj|BAB63444.1| ubiquitin 3 [Physarum polycephalum]
gi|19909904|dbj|BAB87825.1| polyubiquitin [Physarum polycephalum]
Length = 305
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ S+K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIHKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ S+K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|15284034|dbj|BAB63445.1| ubiquitin 4 [Physarum polycephalum]
gi|19909906|dbj|BAB87826.1| polyubiquitin [Physarum polycephalum]
Length = 305
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ S+K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ S+K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIESVKTKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|302655191|ref|XP_003019389.1| hypothetical protein TRV_06592 [Trichophyton verrucosum HKI 0517]
gi|291183107|gb|EFE38744.1| hypothetical protein TRV_06592 [Trichophyton verrucosum HKI 0517]
Length = 438
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 18/235 (7%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 5 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 64
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGT 119
I KE T + L + +++ N + ++ + ++V+ +DT+ ++K KI +G
Sbjct: 65 IQKEST-LHLVLRLRGETTTNTISQ-PVVKTLTGKTITLEVESSDTIDNVKTKIQDKEGI 122
Query: 120 PIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSS 179
P + L F+G +L+D R LS+Y I++ S + + L RL +Q
Sbjct: 123 PPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVL-------------RLRGGMQIFVK 168
Query: 180 LLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGV 234
L G +I LE++ S T++ ++ + + +P + I + + D +L W GV
Sbjct: 169 TLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL-WMGV 222
>gi|217074516|gb|ACJ85618.1| unknown [Medicago truncatula]
Length = 229
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGGY
Sbjct: 224 RLRGGY 229
>gi|312160|emb|CAA51679.1| ubiquitin [Solanum lycopersicum]
Length = 534
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K +RK ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTRKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 318 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 424 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 469
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 470 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 525
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 241 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST------ 294
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 295 ---LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 351
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R L++Y I++ S + + L RL +Q L G +I LE+
Sbjct: 352 KQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEV 397
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 398 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|3047318|gb|AAC13691.1| poly-ubiquitin [Magnaporthe grisea]
Length = 379
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 28/245 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ + + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKETTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL---- 221
Query: 247 VSRGG 251
V RGG
Sbjct: 222 VLRGG 226
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 235 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 292
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 293 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 345
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 346 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 374
>gi|393218664|gb|EJD04152.1| polyubiquitin [Fomitiporia mediterranea MF3/22]
Length = 321
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ +++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDTVKNKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEI 151
F+G +L+D R LS+Y I++ S +
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTL 295
>gi|323448851|gb|EGB04744.1| ubiquitin [Aureococcus anophagefferens]
Length = 229
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|118370602|ref|XP_001018502.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300269|gb|EAR98257.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 228
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L++ + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ TDT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTVTLDVEATDTIENIKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVESSDTIENIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|323452163|gb|EGB08038.1| polyubiquitin [Aureococcus anophagefferens]
Length = 305
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|83305995|emb|CAE00783.1| polyubiquitin homolog [Sordaria macrospora]
Length = 208
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 107/231 (46%), Gaps = 24/231 (10%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
LEV + + +K+KI+ +IP Q L +G +L DG + DY I KE T
Sbjct: 1 ITLEVESSDTIDNVKQKIQDKEDIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST------ 54
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + ++V+ +DT+ ++K+KI +G P + L F+G
Sbjct: 55 ---LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAG 111
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R LS+Y I++ S + + L RL +Q L G +I LE+
Sbjct: 112 KQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEV 157
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILY 241
+ S T++ ++ + + +P + I + + D +L + ++ L+
Sbjct: 158 ESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 208
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 74 GKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 130
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 131 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLI 184
Query: 128 FSGIELDDEFRNLSEYGIREFS 149
F+G +L+D R LS+Y I++ S
Sbjct: 185 FAGKQLED-GRTLSDYNIQKES 205
>gi|325302882|tpg|DAA34473.1| TPA_exp: ubiquitin [Amblyomma variegatum]
Length = 241
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 26/245 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 67
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 68 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 120
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 166
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T+ ++ + + +P + I + + D +L + ++ L++ G
Sbjct: 167 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL--GL 224
Query: 247 VSRGG 251
RGG
Sbjct: 225 RLRGG 229
>gi|307193107|gb|EFN76024.1| Ubiquitin [Harpegnathos saltator]
Length = 229
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 26/245 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTV 247
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--LR 224
Query: 248 SRGGY 252
RGG+
Sbjct: 225 LRGGF 229
>gi|425780946|gb|EKV18932.1| hypothetical protein PDIP_25190 [Penicillium digitatum Pd1]
Length = 233
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 24/238 (10%)
Query: 6 VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT 65
+ G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 11 LVTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 70
Query: 66 KIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRM 124
L + I +K + ++V+ +DT+ ++K KI +G P +
Sbjct: 71 ---------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 121
Query: 125 LLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGA 184
L F+G +L+D R LS+Y I++ S + + L RL +Q L G
Sbjct: 122 RLIFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGK 167
Query: 185 SIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+I LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 168 TITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 225
>gi|255714909|ref|XP_002553736.1| KLTH0E05852p [Lachancea thermotolerans]
gi|238935118|emb|CAR23299.1| KLTH0E05852p [Lachancea thermotolerans CBS 6340]
Length = 409
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 113 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 170
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 171 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 223
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 224 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 269
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 270 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 325
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 265 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 322
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 323 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 375
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 376 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 404
>gi|169607224|ref|XP_001797032.1| hypothetical protein SNOG_06667 [Phaeosphaeria nodorum SN15]
gi|111065378|gb|EAT86498.1| hypothetical protein SNOG_06667 [Phaeosphaeria nodorum SN15]
Length = 234
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 39/246 (15%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ----RIMRD---------NCSLRW 231
LE++ S T++ ++ + + +P ++ IF KQ R + D + LR
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 225
Query: 232 HGVEYG 237
G +YG
Sbjct: 226 RGGQYG 231
>gi|425774856|gb|EKV13151.1| hypothetical protein PDIG_39650 [Penicillium digitatum PHI26]
Length = 309
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 24/238 (10%)
Query: 6 VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT 65
+ G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 11 LVTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 70
Query: 66 KIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRM 124
L + I +K + ++V+ +DT+ ++K KI +G P +
Sbjct: 71 ---------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 121
Query: 125 LLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGA 184
L F+G +L+D R LS+Y I++ S + + L RL +Q L G
Sbjct: 122 RLIFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGK 167
Query: 185 SIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+I LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 168 TITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 225
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 165 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 222
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 223 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 275
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 276 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 304
>gi|154275270|ref|XP_001538486.1| polyubiquitin [Ajellomyces capsulatus NAm1]
gi|150414926|gb|EDN10288.1| polyubiquitin [Ajellomyces capsulatus NAm1]
Length = 305
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNVKSKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE+++S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVENSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|307108562|gb|EFN56802.1| hypothetical protein CHLNCDRAFT_51574 [Chlorella variabilis]
Length = 979
Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 80 GKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST--- 136
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 137 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 190
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 191 FAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 236
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 237 LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 291
Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 760 GKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST--- 816
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 817 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLI 870
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 871 FAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 916
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 917 LEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 971
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 35 IPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPS 93
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 710 IPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGGMQIFVKTLTG 760
Query: 94 RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIV 153
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S + +
Sbjct: 761 KTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLADYNIQKESTLHL 819
Query: 154 FLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRED 213
L RL +Q L G +I LE++ S T+ ++ + + +P +
Sbjct: 820 VL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQ 866
Query: 214 YIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 867 QRLIFAGKQLEDGRTLADYNIQKESTLHL 895
>gi|4150898|emb|CAA76577.1| polyubiquitin [Suberites domuncula]
Length = 305
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|112983984|ref|NP_001036839.1| polyubiquitin [Bombyx mori]
gi|4587236|dbj|BAA76676.1| polyubiquitin [Bombyx mori]
Length = 913
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 424 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 469
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 470 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 773
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 774 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 541 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLENGRTLSDYNIQKEST-- 598
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 599 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 651
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 652 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 697
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 698 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 769 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 826
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 827 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 879
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 880 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 908
>gi|260600300|gb|ACX46987.1| ubiquitin [Guzmania wittmackii x Guzmania lingulata]
Length = 441
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P E I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T++ ++ + + +P ++ IF KQ
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 429
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDD 135
F+G +L+D
Sbjct: 424 IFAGKQLED 432
>gi|19698797|gb|AAL91109.1| ubiquitin [Onchocerca volvulus]
Length = 305
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|358336555|dbj|GAA55031.1| ubiquitin C [Clonorchis sinensis]
Length = 228
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|340727978|ref|XP_003402310.1| PREDICTED: polyubiquitin-B-like isoform 1 [Bombus terrestris]
gi|340727980|ref|XP_003402311.1| PREDICTED: polyubiquitin-B-like isoform 2 [Bombus terrestris]
gi|340727982|ref|XP_003402312.1| PREDICTED: polyubiquitin-B-like isoform 3 [Bombus terrestris]
Length = 229
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|393912430|gb|EJD76734.1| polyubiquitin, variant 2 [Loa loa]
Length = 322
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 26 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 83
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 84 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 136
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 137 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 182
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 183 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 238
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 178 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 235
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 236 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 288
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 289 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 317
>gi|156552611|ref|XP_001599434.1| PREDICTED: polyubiquitin-A-like isoform 1 [Nasonia vitripennis]
gi|345487600|ref|XP_003425726.1| PREDICTED: polyubiquitin-A-like isoform 2 [Nasonia vitripennis]
Length = 913
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 849
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 850 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905
>gi|393912432|gb|EJD76736.1| polyubiquitin, variant 1 [Loa loa]
Length = 381
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|324509924|gb|ADY44155.1| Polyubiquitin-A, partial [Ascaris suum]
Length = 626
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 26 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 83
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 84 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 136
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 137 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 182
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 183 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 238
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 254 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 311
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 312 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 364
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 365 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 410
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 411 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 466
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 482 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 539
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 540 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 592
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 593 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 621
>gi|308497342|ref|XP_003110858.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
gi|308242738|gb|EFO86690.1| CRE-UBQ-1 protein [Caenorhabditis remanei]
Length = 920
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 699 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 756
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 757 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 809
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 810 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 855
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 856 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 911
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 30/242 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSG------IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSL 180
F+G +L+D R LS+Y I++ S + + L RL +Q
Sbjct: 576 IFAGKNNCERKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKT 621
Query: 181 LNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDIL 240
L G +I LE++ S T+ ++ + + +P + I + + D +L + ++ L
Sbjct: 622 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 681
Query: 241 YV 242
++
Sbjct: 682 HL 683
>gi|312080345|ref|XP_003142560.1| ubiquitin C II [Loa loa]
gi|393912431|gb|EJD76735.1| polyubiquitin [Loa loa]
Length = 398
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 26 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 83
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 84 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 136
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 137 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 182
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 183 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 238
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 254 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 311
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 312 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 364
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 365 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 393
>gi|307172602|gb|EFN63961.1| Ubiquitin [Camponotus floridanus]
Length = 459
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|25151716|ref|NP_741157.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
gi|302595957|sp|P0CG71.1|UBIQ1_CAEEL RecName: Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|373219552|emb|CCD68779.1| Protein UBQ-1, isoform a [Caenorhabditis elegans]
Length = 838
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLIGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 832
>gi|357474767|ref|XP_003607669.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
gi|355508724|gb|AES89866.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
Length = 448
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 27/254 (10%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 220 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 279
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T L + I +K + ++V+ +DT+ ++K KI +G
Sbjct: 280 IQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 330
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSS 178
P + L F+G +L+D R L++Y I++ S + + L RL +Q
Sbjct: 331 IPPDQQRLIFAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLRGGMQIFV 376
Query: 179 SLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGD 238
L G +I LE++ S T++ ++ + + +P + I + + D +L + ++
Sbjct: 377 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 436
Query: 239 ILYVFKGTVSRGGY 252
L++ RGGY
Sbjct: 437 TLHLV--LRLRGGY 448
>gi|332021030|gb|EGI61419.1| Ubiquitin [Acromyrmex echinatior]
Length = 459
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|242021992|ref|XP_002431426.1| ubiquitin, putative [Pediculus humanus corporis]
gi|212516707|gb|EEB18688.1| ubiquitin, putative [Pediculus humanus corporis]
Length = 844
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 466 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 523
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 524 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 576
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 577 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 622
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 623 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 678
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 694 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 751
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 752 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 804
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 805 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 833
>gi|195435796|ref|XP_002065865.1| GK20481 [Drosophila willistoni]
gi|194161950|gb|EDW76851.1| GK20481 [Drosophila willistoni]
Length = 611
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|4150912|emb|CAA72799.1| polyubiquitin precursor [Suberites domuncula]
Length = 381
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|156482|gb|AAA28154.1| polyubiquitin [Caenorhabditis elegans]
Length = 838
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKQSTLHLVLR 832
>gi|327356699|gb|EGE85556.1| hypothetical protein BDDG_08501 [Ajellomyces dermatitidis ATCC
18188]
Length = 333
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 24/241 (9%)
Query: 3 IIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVK 62
++ G LEV + + +K KI+ IP Q L +G +L DG + DY I K
Sbjct: 108 VVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 167
Query: 63 EGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPI 121
E T L + I +K + ++V+ +DT+ ++K KI +G P
Sbjct: 168 EST---------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPP 218
Query: 122 KRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLL 181
+ L F+G +L+D R LS+Y I++ S + + L RL +Q L
Sbjct: 219 DQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTL 264
Query: 182 NGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILY 241
G +I LE++ S T++ ++ + + +P + I + + D +L + ++ L+
Sbjct: 265 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 324
Query: 242 V 242
+
Sbjct: 325 L 325
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 112/255 (43%), Gaps = 34/255 (13%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-K 66
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 67 IDLTINPFLQ--SSFNQ-----------------HDKIHIIIKFPSRKFNIDVDRTDTVR 107
+ L + +Q SF Q + ++ + ++V+ +DT+
Sbjct: 69 LVLRLRGGMQICMSFEQVLSYIDMFYVRENQALTYTLQTVVKTLTGKTITLEVESSDTID 128
Query: 108 SLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPI 167
++K KI +G P + L F+G +L+D R LS+Y I++ S + + L
Sbjct: 129 NVKSKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVL------------ 175
Query: 168 RRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNC 227
RL +Q L G +I LE++ S T++ ++ + + +P + I + + D
Sbjct: 176 -RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGR 234
Query: 228 SLRWHGVEYGDILYV 242
+L + ++ L++
Sbjct: 235 TLSDYNIQKESTLHL 249
>gi|290462837|gb|ADD24466.1| Ubiquitin [Lepeophtheirus salmonis]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|32564339|ref|NP_741158.2| Protein UBQ-1, isoform c [Caenorhabditis elegans]
gi|373219553|emb|CCD68780.1| Protein UBQ-1, isoform c [Caenorhabditis elegans]
Length = 538
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLIGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 390 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 446
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 500
Query: 128 FSGI 131
F+G+
Sbjct: 501 FAGV 504
>gi|268571891|ref|XP_002641176.1| C. briggsae CBR-UBQ-1 protein [Caenorhabditis briggsae]
Length = 762
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 756
>gi|307206691|gb|EFN84646.1| Ubiquitin [Harpegnathos saltator]
Length = 686
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>gi|229577230|ref|NP_001153331.1| ubiquitin C-like [Nasonia vitripennis]
Length = 610
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|66510555|ref|XP_393173.2| PREDICTED: polyubiquitin-A-like isoform 1 [Apis mellifera]
gi|328780726|ref|XP_003249849.1| PREDICTED: polyubiquitin-A-like [Apis mellifera]
Length = 761
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 756
>gi|68472143|ref|XP_719867.1| hypothetical protein CaO19.6771 [Candida albicans SC5314]
gi|68472378|ref|XP_719750.1| hypothetical protein CaO19.14063 [Candida albicans SC5314]
gi|3687425|emb|CAA76783.1| polyubiquitin [Candida albicans]
gi|46441582|gb|EAL00878.1| hypothetical protein CaO19.14063 [Candida albicans SC5314]
gi|46441708|gb|EAL01003.1| hypothetical protein CaO19.6771 [Candida albicans SC5314]
gi|238881109|gb|EEQ44747.1| hypothetical protein CAWG_03035 [Candida albicans WO-1]
gi|354545623|emb|CCE42351.1| hypothetical protein CPAR2_809000 [Candida parapsilosis]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|302393783|sp|P59669.2|UBIQP_GEOCY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|11154|emb|CAA50268.1| ubiquitin [Geodia cydonium]
Length = 457
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVVRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 451
Query: 247 VSRGGY 252
RGG+
Sbjct: 452 RLRGGF 457
>gi|571519|gb|AAA75310.1| polyubiquitin [Gracilaria gracilis]
gi|1095488|prf||2109223A poly-ubiquitin
Length = 457
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K ++ ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTAKTITLEVESSDTIENVKTKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 318 TLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 241 ITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST------ 294
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 295 ---LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAG 351
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R LS+Y I++ S + + L RL +Q L G +I LE+
Sbjct: 352 KQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEV 397
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 398 ESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 424 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 452
>gi|332023427|gb|EGI63670.1| Ubiquitin [Acromyrmex echinatior]
Length = 534
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|328780728|ref|XP_003249850.1| PREDICTED: polyubiquitin-A-like [Apis mellifera]
Length = 685
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|365764258|gb|EHN05782.1| Ubi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|452984043|gb|EME83800.1| hypothetical protein MYCFIDRAFT_60610 [Pseudocercospora fijiensis
CIRAD86]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|350416822|ref|XP_003491120.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Bombus
impatiens]
Length = 611
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPAT--SQTLAVSGWELVDGLDMEDYPIVKEGT 65
G LEV + + +K KI+ IP + Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPRSPDQQRLIFAGKQLEDGRTLSDYNIQKEST 524
Query: 66 KIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRM 124
L + I +K + ++V+ +DT+ ++K KI +G P +
Sbjct: 525 ---------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ 575
Query: 125 LLFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
L F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 RLIFAGKQLED-GRTLSDYNIQKESTLHLVLR 606
>gi|396492504|ref|XP_003843815.1| hypothetical protein LEMA_P014660.1 [Leptosphaeria maculans JN3]
gi|312220395|emb|CBY00336.1| hypothetical protein LEMA_P014660.1 [Leptosphaeria maculans JN3]
Length = 395
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 99 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 156
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 157 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 209
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 210 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 255
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 256 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 311
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 251 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 308
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 309 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 361
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 362 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 390
>gi|295661227|ref|XP_002791169.1| ubiquitin [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281096|gb|EEH36662.1| ubiquitin [Paracoccidioides sp. 'lutzii' Pb01]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESGDTIDGVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|226484047|emb|CAX79692.1| ubiquitin C [Schistosoma japonicum]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + ++D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLKDGRTLSDYNIQKESTLHL 221
>gi|62083359|gb|AAX62404.1| polyubiquitin [Lysiphlebus testaceipes]
Length = 538
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 424 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 469
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 470 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFVGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|213401917|ref|XP_002171731.1| ubiquitin [Schizosaccharomyces japonicus yFS275]
gi|211999778|gb|EEB05438.1| ubiquitin [Schizosaccharomyces japonicus yFS275]
Length = 382
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|358332080|dbj|GAA27344.2| polyubiquitin-A [Clonorchis sinensis]
Length = 288
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 69 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 126
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 127 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 179
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 180 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 225
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 226 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 281
>gi|55783587|gb|AAV65292.1| polyubiquitin [Aspergillus fumigatus]
Length = 304
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|6322989|ref|NP_013061.1| ubiquitin [Saccharomyces cerevisiae S288c]
gi|260940391|ref|XP_002614495.1| ubiquitin [Clavispora lusitaniae ATCC 42720]
gi|302595956|sp|P0CG63.1|UBI4P_YEAST RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|4734|emb|CAA29198.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1360231|emb|CAA97489.1| UBI4 [Saccharomyces cerevisiae]
gi|151941132|gb|EDN59510.1| poly-ubiquitin [Saccharomyces cerevisiae YJM789]
gi|190406010|gb|EDV09277.1| hypothetical protein SCRG_04952 [Saccharomyces cerevisiae RM11-1a]
gi|238851681|gb|EEQ41145.1| ubiquitin [Clavispora lusitaniae ATCC 42720]
gi|259147952|emb|CAY81201.1| Ubi4p [Saccharomyces cerevisiae EC1118]
gi|285813387|tpg|DAA09283.1| TPA: ubiquitin [Saccharomyces cerevisiae S288c]
gi|323336529|gb|EGA77795.1| Ubi4p [Saccharomyces cerevisiae Vin13]
gi|349579690|dbj|GAA24851.1| K7_Ubi4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 381
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|440638790|gb|ELR08709.1| polyubiquitin [Geomyces destructans 20631-21]
Length = 381
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|115492305|ref|XP_001210780.1| ubiquitin [Aspergillus terreus NIH2624]
gi|149242950|ref|XP_001526489.1| hypothetical protein LELG_03047 [Lodderomyces elongisporus NRRL
YB-4239]
gi|169771599|ref|XP_001820269.1| ubiquitin [Aspergillus oryzae RIB40]
gi|212542037|ref|XP_002151173.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces marneffei ATCC
18224]
gi|238485820|ref|XP_002374148.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus flavus NRRL3357]
gi|242769894|ref|XP_002341866.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces stipitatus ATCC
10500]
gi|448097159|ref|XP_004198602.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
gi|448111178|ref|XP_004201781.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
gi|83768128|dbj|BAE58267.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|114197640|gb|EAU39340.1| ubiquitin [Aspergillus terreus NIH2624]
gi|146450612|gb|EDK44868.1| hypothetical protein LELG_03047 [Lodderomyces elongisporus NRRL
YB-4239]
gi|210066080|gb|EEA20173.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces marneffei ATCC
18224]
gi|218725062|gb|EED24479.1| polyubiquitin UbiD/Ubi4, putative [Talaromyces stipitatus ATCC
10500]
gi|220699027|gb|EED55366.1| polyubiquitin UbiD/Ubi4, putative [Aspergillus flavus NRRL3357]
gi|359380024|emb|CCE82265.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
gi|359464770|emb|CCE88475.1| Piso0_001982 [Millerozyma farinosa CBS 7064]
gi|391871753|gb|EIT80910.1| ubiquitin and ubiquitin-like protein [Aspergillus oryzae 3.042]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|239611163|gb|EEQ88150.1| ubiquitin [Ajellomyces dermatitidis ER-3]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|119500448|ref|XP_001266981.1| polyubiquitin (UbiD), putative [Neosartorya fischeri NRRL 181]
gi|121707680|ref|XP_001271909.1| polyubiquitin (UbiD), putative [Aspergillus clavatus NRRL 1]
gi|119400057|gb|EAW10483.1| polyubiquitin (UbiD), putative [Aspergillus clavatus NRRL 1]
gi|119415146|gb|EAW25084.1| polyubiquitin (UbiD), putative [Neosartorya fischeri NRRL 181]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|320580936|gb|EFW95158.1| Ubiquitin C variant [Ogataea parapolymorpha DL-1]
Length = 761
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ + + + +P + I + D +L + ++ L++
Sbjct: 622 TLEVESSDTIDNVESEIQDKEGIPPDQRRLIFAGMQLEDGRTLSDYNIQKESTLHL 677
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++ +I+ IP + L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVESSDTIDNVESEIQDKEGIPPDQRRLIFAGMQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 756
>gi|391348265|ref|XP_003748368.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-A-like [Metaseiulus
occidentalis]
Length = 913
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYSIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 773
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 774 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 829
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V L + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVELADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGXTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ L + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEASDTIENVKVKLQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 849
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + P + I + + D +L + ++ L++
Sbjct: 850 TLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYSIQKESTLHL 677
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKESTLHL 449
>gi|328792775|ref|XP_395993.4| PREDICTED: polyubiquitin-A-like isoform 1 [Apis mellifera]
Length = 795
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L +Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLLDYNIQKESTLHLVLR 756
>gi|156841217|ref|XP_001643983.1| hypothetical protein Kpol_1070p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114615|gb|EDO16125.1| hypothetical protein Kpol_1070p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 533
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|341879718|gb|EGT35653.1| hypothetical protein CAEBREN_32771 [Caenorhabditis brenneri]
Length = 970
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 65 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 122
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 123 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 175
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 176 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 221
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 222 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 277
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 293 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 350
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 351 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 403
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 404 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 449
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 450 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 505
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 521 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 578
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 579 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 631
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 632 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 677
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 678 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 733
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 749 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 806
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 807 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 859
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 860 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 905
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 906 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 961
>gi|324520160|gb|ADY47572.1| Polyubiquitin-A, partial [Ascaris suum]
Length = 354
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|146421245|ref|XP_001486573.1| ubiquitin [Meyerozyma guilliermondii ATCC 6260]
gi|146389988|gb|EDK38146.1| ubiquitin [Meyerozyma guilliermondii ATCC 6260]
Length = 457
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|340939025|gb|EGS19647.1| hypothetical protein CTHT_0041260 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|440791755|gb|ELR12993.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
gi|440792103|gb|ELR13331.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 35/237 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEI-IVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGAS 185
F+G +L+D R L++Y I++ S + ++F+KT L G +
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLIFVKT-----------------------LTGKT 155
Query: 186 IPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 156 ITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 212
>gi|241953793|ref|XP_002419618.1| ubiquitin, putative [Candida dubliniensis CD36]
gi|302595951|sp|P0CG74.1|UBI4P_CANAL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|2437825|emb|CAA90901.1| polyubiquitin [Candida albicans]
gi|223642958|emb|CAX43214.1| ubiquitin, putative [Candida dubliniensis CD36]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|374717833|gb|AEZ66647.1| putative beta-1,6-glucanase [Wickerhamomyces anomalus]
gi|374717835|gb|AEZ66648.1| putative beta-1,6-glucanase [Wickerhamomyces anomalus]
Length = 381
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|324514657|gb|ADY45941.1| Polyubiquitin-A, partial [Ascaris suum]
Length = 474
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILP 210
LE++ S T+ ++ + + +P
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIP 417
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 31/190 (16%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G LS+Y I++ S + + L RL +Q L G +I
Sbjct: 424 IFAG--------TLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 462
Query: 187 PLEMQDSSTV 196
LE++ S T+
Sbjct: 463 TLEVEASDTI 472
>gi|164510092|emb|CAJ32650.1| ubiquitin [Mytilus edulis]
Length = 228
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 25/244 (10%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ IP Q+L +G +L DG + DY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLIFAGKQLEDGSTLSDYN 60
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T L + I +K + ++V+ +DT+ ++K KI +G
Sbjct: 61 IQKEST---------LHLVLRLSGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG 111
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSS 178
P + L F+G +L+D LS+Y I++ S + + L RLS +Q
Sbjct: 112 IPPDQQSLIFAGKQLED-GSTLSDYNIQKESTLHLVL-------------RLSGGMQIFV 157
Query: 179 SLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGD 238
L G +I LE++ S T+ ++ + + +P + + + + D +L + ++
Sbjct: 158 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQSLMFAGKQLEDGSTLSDYNIQKES 217
Query: 239 ILYV 242
L++
Sbjct: 218 TLHL 221
>gi|46128781|ref|XP_388944.1| hypothetical protein FG08768.1 [Gibberella zeae PH-1]
gi|189190970|ref|XP_001931824.1| ubiquitin [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330938030|ref|XP_003305664.1| hypothetical protein PTT_18575 [Pyrenophora teres f. teres 0-1]
gi|398405616|ref|XP_003854274.1| hypothetical protein MYCGRDRAFT_57170 [Zymoseptoria tritici IPO323]
gi|187973430|gb|EDU40929.1| ubiquitin [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311317170|gb|EFQ86204.1| hypothetical protein PTT_18575 [Pyrenophora teres f. teres 0-1]
gi|339474157|gb|EGP89250.1| hypothetical protein MYCGRDRAFT_57170 [Zymoseptoria tritici IPO323]
gi|344301515|gb|EGW31827.1| polyubiquitin [Spathaspora passalidarum NRRL Y-27907]
gi|346970979|gb|EGY14431.1| ubiquitin [Verticillium dahliae VdLs.17]
gi|358394958|gb|EHK44351.1| hypothetical protein TRIATDRAFT_300588 [Trichoderma atroviride IMI
206040]
gi|401882407|gb|EJT46666.1| hypothetical protein A1Q1_04737 [Trichosporon asahii var. asahii
CBS 2479]
gi|408390396|gb|EKJ69797.1| hypothetical protein FPSE_10045 [Fusarium pseudograminearum CS3096]
gi|429860337|gb|ELA35078.1| ubiquitin [Colletotrichum gloeosporioides Nara gc5]
gi|449302308|gb|EMC98317.1| hypothetical protein BAUCODRAFT_32336 [Baudoinia compniacensis UAMH
10762]
gi|452843190|gb|EME45125.1| hypothetical protein DOTSEDRAFT_70987 [Dothistroma septosporum
NZE10]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|426263332|emb|CCG34086.1| Polyubiquitin [uncultured eukaryote]
Length = 304
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMRIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIRE 147
F+G +L+D R LS+Y I++
Sbjct: 272 IFAGKQLED-GRTLSDYNIQK 291
>gi|50286405|ref|XP_445631.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524936|emb|CAG58542.1| unnamed protein product [Candida glabrata]
Length = 533
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|225558948|gb|EEH07231.1| ubiquitin [Ajellomyces capsulatus G186AR]
gi|240281869|gb|EER45372.1| polyubiquitin [Ajellomyces capsulatus H143]
gi|325088005|gb|EGC41315.1| polyubiquitin [Ajellomyces capsulatus H88]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESADTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|50423807|ref|XP_460488.1| DEHA2F02816p [Debaryomyces hansenii CBS767]
gi|210076178|ref|XP_504128.2| YALI0E18986p [Yarrowia lipolytica]
gi|49656157|emb|CAG88798.1| DEHA2F02816p [Debaryomyces hansenii CBS767]
gi|199426939|emb|CAG79723.2| YALI0E18986p [Yarrowia lipolytica CLIB122]
gi|392574761|gb|EIW67896.1| hypothetical protein TREMEDRAFT_44902 [Tremella mesenterica DSM
1558]
Length = 457
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|116202449|ref|XP_001227036.1| polyubiquitin [Chaetomium globosum CBS 148.51]
gi|126139705|ref|XP_001386375.1| hypothetical protein PICST_73878 [Scheffersomyces stipitis CBS
6054]
gi|255948832|ref|XP_002565183.1| Pc22g12390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|367040177|ref|XP_003650469.1| hypothetical protein THITE_2072392 [Thielavia terrestris NRRL 8126]
gi|389633097|ref|XP_003714201.1| polyubiquitin [Magnaporthe oryzae 70-15]
gi|2894304|emb|CAA11267.1| polyubiquitin [Nicotiana tabacum]
gi|3334645|emb|CAA07773.1| polyubiquitin [Gibberella pulicaris]
gi|88177627|gb|EAQ85095.1| polyubiquitin [Chaetomium globosum CBS 148.51]
gi|88766393|gb|ABD49716.1| polyubiquitin [Metarhizium anisopliae]
gi|126093657|gb|ABN68346.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|211592200|emb|CAP98527.1| Pc22g12390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|310800960|gb|EFQ35853.1| ubiquitin family protein [Glomerella graminicola M1.001]
gi|322711004|gb|EFZ02578.1| ubiquitin [Metarhizium anisopliae ARSEF 23]
gi|340516961|gb|EGR47207.1| polyubiquitin [Trichoderma reesei QM6a]
gi|346997730|gb|AEO64133.1| hypothetical protein THITE_2072392 [Thielavia terrestris NRRL 8126]
gi|351646534|gb|EHA54394.1| polyubiquitin [Magnaporthe oryzae 70-15]
gi|358386330|gb|EHK23926.1| hypothetical protein TRIVIDRAFT_215920 [Trichoderma virens Gv29-8]
gi|361129858|gb|EHL01740.1| putative Polyubiquitin [Glarea lozoyensis 74030]
gi|378733143|gb|EHY59602.1| polyubiquitin [Exophiala dermatitidis NIH/UT8656]
gi|402085157|gb|EJT80055.1| polyubiquitin [Gaeumannomyces graminis var. tritici R3-111a-1]
gi|406701275|gb|EKD04425.1| hypothetical protein A1Q2_01309 [Trichosporon asahii var. asahii
CBS 8904]
gi|406867327|gb|EKD20365.1| ubiquitin [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
gi|407920052|gb|EKG13270.1| Ubiquitin [Macrophomina phaseolina MS6]
gi|453085016|gb|EMF13059.1| ubiquitin [Mycosphaerella populorum SO2202]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|296420280|ref|XP_002839703.1| hypothetical protein [Tuber melanosporum Mel28]
gi|13345367|gb|AAK19308.1| polyubiquitin [Tuber borchii]
gi|295635897|emb|CAZ83894.1| unnamed protein product [Tuber melanosporum]
Length = 306
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|365986434|ref|XP_003670049.1| hypothetical protein NDAI_0D04930 [Naumovozyma dairenensis CBS 421]
gi|410082970|ref|XP_003959063.1| hypothetical protein KAFR_0I01470 [Kazachstania africana CBS 2517]
gi|444321755|ref|XP_004181533.1| hypothetical protein TBLA_0G00670 [Tetrapisispora blattae CBS 6284]
gi|343768818|emb|CCD24806.1| hypothetical protein NDAI_0D04930 [Naumovozyma dairenensis CBS 421]
gi|372465653|emb|CCF59928.1| hypothetical protein KAFR_0I01470 [Kazachstania africana CBS 2517]
gi|387514578|emb|CCH62014.1| hypothetical protein TBLA_0G00670 [Tetrapisispora blattae CBS 6284]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|124377852|tpd|FAA00316.1| TPA: polyubiquitin [Eremothecium gossypii]
gi|124377856|tpd|FAA00318.1| TPA: polyubiquitin [Saccharomyces paradoxus NRRL Y-17217]
Length = 380
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|114159828|gb|ABI53721.1| polyubiquitin [Pyropia yezoensis]
Length = 457
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|57163957|ref|NP_001009202.1| polyubiquitin-B [Ovis aries]
gi|302595880|sp|P0CG55.1|UBB_SHEEP RecName: Full=Polyubiquitin-B; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
gi|2707837|gb|AAB92373.1| polyubiquitin [Ovis aries]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|19112201|ref|NP_595409.1| ubiquitin [Schizosaccharomyces pombe 972h-]
gi|302595955|sp|P0CG72.1|UBI4P_SCHPO RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|3738185|emb|CAA21278.1| ubiquitin [Schizosaccharomyces pombe]
Length = 382
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|336385317|gb|EGO26464.1| hypothetical protein SERLADRAFT_368035 [Serpula lacrymans var.
lacrymans S7.9]
gi|392571572|gb|EIW64744.1| ubiquitin [Trametes versicolor FP-101664 SS1]
gi|395334250|gb|EJF66626.1| ubiquitin [Dichomitus squalens LYAD-421 SS1]
gi|403414247|emb|CCM00947.1| predicted protein [Fibroporia radiculosa]
Length = 381
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|261205776|ref|XP_002627625.1| ubiquitin [Ajellomyces dermatitidis SLH14081]
gi|239592684|gb|EEQ75265.1| ubiquitin [Ajellomyces dermatitidis SLH14081]
Length = 381
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESGDTIDAVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|225715800|gb|ACO13746.1| Ubiquitin [Esox lucius]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + V +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|402220063|gb|EJU00136.1| ubiquitin [Dacryopinax sp. DJM-731 SS1]
Length = 381
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|322699454|gb|EFY91215.1| ubiquitin [Metarhizium acridum CQMa 102]
Length = 343
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 47 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 104
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 105 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 157
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 158 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 203
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 204 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 259
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 199 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 256
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 257 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 309
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 310 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 338
>gi|366992347|ref|XP_003675939.1| hypothetical protein NCAS_0C05850 [Naumovozyma castellii CBS 4309]
gi|342301804|emb|CCC69575.1| hypothetical protein NCAS_0C05850 [Naumovozyma castellii CBS 4309]
Length = 388
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|254585537|ref|XP_002498336.1| ZYRO0G07854p [Zygosaccharomyces rouxii]
gi|238941230|emb|CAR29403.1| ZYRO0G07854p [Zygosaccharomyces rouxii]
Length = 460
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|71008515|ref|XP_758220.1| hypothetical protein UM02073.1 [Ustilago maydis 521]
gi|46097838|gb|EAK83071.1| hypothetical protein UM02073.1 [Ustilago maydis 521]
Length = 387
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 18/236 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTHS 220
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
+ L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 221 PCST---LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 277
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 278 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 323
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 324 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 379
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 24/229 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T++ ++ + + +P + I + + D +L + ++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214
>gi|402224638|gb|EJU04700.1| polyubiquitin UbiD/Ubi4 [Dacryopinax sp. DJM-731 SS1]
Length = 229
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|255732802|ref|XP_002551324.1| ubiquitin [Candida tropicalis MYA-3404]
gi|240131065|gb|EER30626.1| ubiquitin [Candida tropicalis MYA-3404]
Length = 299
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGI 145
F+G +L+D R LS+Y I
Sbjct: 272 IFAGKQLED-GRTLSDYNI 289
>gi|254574192|ref|XP_002494205.1| Ubiquitin [Komagataella pastoris GS115]
gi|238034004|emb|CAY72026.1| Ubiquitin [Komagataella pastoris GS115]
Length = 310
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|124377858|tpd|FAA00319.1| TPA: polyubiquitin [Cryptococcus neoformans var. neoformans
B-3501A]
Length = 456
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|114159830|gb|ABI53722.1| polyubiquitin [Pyropia yezoensis]
Length = 533
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 424 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 469
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 470 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKLKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|3776536|gb|AAC64787.1| polyubiquitin [Schizosaccharomyces pombe]
Length = 610
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|406606462|emb|CCH42236.1| ubiquitin C [Wickerhamomyces ciferrii]
Length = 383
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|384496533|gb|EIE87024.1| polyubiquitin [Rhizopus delemar RA 99-880]
Length = 229
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|328353975|emb|CCA40372.1| Ubiquitin cross-reactive protein [Komagataella pastoris CBS 7435]
Length = 386
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|67191208|ref|NP_066289.2| polyubiquitin-C [Homo sapiens]
Length = 685
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP+ Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 318 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 545
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 546 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 598
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 599 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 651
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 652 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 680
>gi|45185626|ref|NP_983342.1| ACL062Cp [Ashbya gossypii ATCC 10895]
gi|44981344|gb|AAS51166.1| ACL062Cp [Ashbya gossypii ATCC 10895]
gi|374106548|gb|AEY95457.1| FACL062Cp [Ashbya gossypii FDAG1]
Length = 382
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|226289971|gb|EEH45455.1| ubiquitin [Paracoccidioides brasiliensis Pb18]
Length = 305
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|50307963|ref|XP_453980.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|302595952|sp|P0CG75.1|UBI4P_KLULA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|5531273|emb|CAB50898.1| polyubiquitin [Kluyveromyces lactis]
gi|49643115|emb|CAG99067.1| KLLA0E00749p [Kluyveromyces lactis]
Length = 381
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|154312178|ref|XP_001555417.1| polyubiquitin [Botryotinia fuckeliana B05.10]
gi|171682222|ref|XP_001906054.1| hypothetical protein [Podospora anserina S mat+]
gi|3091264|gb|AAC15225.1| polyubiquitin [Botryotinia fuckeliana]
gi|170941070|emb|CAP66720.1| unnamed protein product [Podospora anserina S mat+]
gi|345566606|gb|EGX49548.1| hypothetical protein AOL_s00078g37 [Arthrobotrys oligospora ATCC
24927]
gi|347836850|emb|CCD51422.1| similar to polyubiquitin protein [Botryotinia fuckeliana]
gi|393248123|gb|EJD55630.1| ubiquitin [Auricularia delicata TFB-10046 SS5]
gi|409051494|gb|EKM60970.1| hypothetical protein PHACADRAFT_247222 [Phanerochaete carnosa
HHB-10118-sp]
Length = 305
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|302680697|ref|XP_003030030.1| polyubiquitin [Schizophyllum commune H4-8]
gi|2739333|gb|AAB94630.1| polyubiquitin [Schizophyllum commune]
gi|300103721|gb|EFI95127.1| polyubiquitin [Schizophyllum commune H4-8]
gi|328770661|gb|EGF80702.1| polyubiquitin [Batrachochytrium dendrobatidis JAM81]
gi|409044635|gb|EKM54116.1| hypothetical protein PHACADRAFT_257732 [Phanerochaete carnosa
HHB-10118-sp]
Length = 305
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|321263887|ref|XP_003196661.1| ATP-dependent protein binding protein [Cryptococcus gattii WM276]
gi|317463138|gb|ADV24874.1| ATP-dependent protein binding protein, putative [Cryptococcus
gattii WM276]
Length = 381
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|259487366|tpe|CBF85986.1| TPA: Polyubiquitin Fragment [Source:UniProtKB/TrEMBL;Acc:A2RVC1]
[Aspergillus nidulans FGSC A4]
Length = 305
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|197129067|gb|ACH45565.1| putative ubiquitin C variant 12 [Taeniopygia guttata]
Length = 381
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDKQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|124377854|tpd|FAA00317.1| TPA: polyubiquitin [Aspergillus nidulans FGSC A4]
Length = 304
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|169844322|ref|XP_001828882.1| ubiquitin C [Coprinopsis cinerea okayama7#130]
gi|170084089|ref|XP_001873268.1| ubiquitin [Laccaria bicolor S238N-H82]
gi|302695715|ref|XP_003037536.1| hypothetical protein SCHCODRAFT_64979 [Schizophyllum commune H4-8]
gi|116509994|gb|EAU92889.1| ubiquitin C [Coprinopsis cinerea okayama7#130]
gi|164650820|gb|EDR15060.1| ubiquitin [Laccaria bicolor S238N-H82]
gi|300111233|gb|EFJ02634.1| hypothetical protein SCHCODRAFT_64979 [Schizophyllum commune H4-8]
gi|336385372|gb|EGO26519.1| hypothetical protein SERLADRAFT_385284 [Serpula lacrymans var.
lacrymans S7.9]
gi|390604125|gb|EIN13516.1| ubiquitin [Punctularia strigosozonata HHB-11173 SS5]
gi|409083376|gb|EKM83733.1| hypothetical protein AGABI1DRAFT_81473 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201575|gb|EKV51498.1| ubiquitin [Agaricus bisporus var. bisporus H97]
gi|443894847|dbj|GAC72194.1| ubiquitin and ubiquitin-like proteins [Pseudozyma antarctica T-34]
Length = 305
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|156064327|ref|XP_001598085.1| polyubiquitin [Sclerotinia sclerotiorum 1980]
gi|154691033|gb|EDN90771.1| polyubiquitin [Sclerotinia sclerotiorum 1980 UF-70]
Length = 305
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L +Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLLDYNIQKESTLHLVLR 300
>gi|393245214|gb|EJD52725.1| ubiquitin [Auricularia delicata TFB-10046 SS5]
Length = 305
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|392597236|gb|EIW86558.1| polyubiquitin [Coniophora puteana RWD-64-598 SS2]
Length = 305
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|225682563|gb|EEH20847.1| ubiquitin [Paracoccidioides brasiliensis Pb03]
Length = 305
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESVDTIDSVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|410976446|ref|XP_003994631.1| PREDICTED: polyubiquitin-B-like [Felis catus]
Length = 229
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI++ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|226473052|emb|CAX71212.1| polyubiquitin [Schistosoma japonicum]
Length = 304
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 27/242 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV---F 243
LE++ S T+ ++ + + +P + I + + D +L + ++ L++ F
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLCF 225
Query: 244 KG 245
+G
Sbjct: 226 RG 227
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 219 -------LHLVLCFRGGMQIFVKTLTGKTITLEVEPSDPIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I + S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIPKESTLPLVLR 300
>gi|58260904|ref|XP_567862.1| ATP-dependent protein binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134116983|ref|XP_772718.1| hypothetical protein CNBK0920 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255336|gb|EAL18071.1| hypothetical protein CNBK0920 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229943|gb|AAW46345.1| ATP-dependent protein binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 457
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|387916118|gb|AFK11668.1| polyubiquitin-like protein [Callorhinchus milii]
Length = 381
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 28/238 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P ++ IF+ KQ + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFVGKQ--LEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPLDQQCLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|302596001|sp|Q58G87.2|UBQ3_ORYSJ RecName: Full=Polyubiquitin 3; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
gi|39546234|emb|CAE04243.3| OSJNBa0089N06.4 [Oryza sativa Japonica Group]
gi|125591721|gb|EAZ32071.1| hypothetical protein OsJ_16259 [Oryza sativa Japonica Group]
Length = 381
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|403413175|emb|CCL99875.1| predicted protein [Fibroporia radiculosa]
Length = 312
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 16 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 73
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 74 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 126
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 127 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 172
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 173 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 228
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 168 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 225
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 226 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 278
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 279 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 307
>gi|350592414|ref|XP_003483459.1| PREDICTED: polyubiquitin-C isoform 1 [Sus scrofa]
gi|350592416|ref|XP_003483460.1| PREDICTED: polyubiquitin-C isoform 2 [Sus scrofa]
gi|350592418|ref|XP_003483461.1| PREDICTED: polyubiquitin-C isoform 3 [Sus scrofa]
gi|350592420|ref|XP_003483462.1| PREDICTED: polyubiquitin-C isoform 4 [Sus scrofa]
gi|302595945|sp|P0CG68.1|UBC_PIG RecName: Full=Polyubiquitin-C; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
Length = 533
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI++ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|297847850|ref|XP_002891806.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337648|gb|EFH68065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 384
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 110/244 (45%), Gaps = 25/244 (10%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I I G LEV + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 79 MQIFIKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 138
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T L + I +K + ++V+ +DT+ ++K KI +G
Sbjct: 139 IQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 189
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSS 178
P + L F+G +L+D R L++Y I++ S + + L RL +Q
Sbjct: 190 IPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFV 235
Query: 179 SLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGD 238
L G +I LE++ S T++ L+ + + +P + I + + D +L + ++
Sbjct: 236 KTLTGKTITLEVESSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES 295
Query: 239 ILYV 242
L++
Sbjct: 296 TLHL 299
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
L+V + + +K KI+ I IP Q L SG L DG + DY I KE
Sbjct: 15 ITLDVESSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKE-------- 66
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + + I IK + ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 67 -SILHLALRLRGGMQIFIKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 125
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R L++Y I++ S + + L RL +Q L G +I LE+
Sbjct: 126 KQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEV 171
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 172 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 223
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 239 TGKTITLEVESSDTIDNLKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 296
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 297 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 349
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 350 IFAGKQLED-GRTLADYNIQKESTLHLVLR 378
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 91 FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSE 150
+ +DV+ +DT+ ++K KI I+G P+ + L FSG LDD R L++Y I++ S
Sbjct: 10 LTEKTITLDVESSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDD-GRTLADYSIQKESI 68
Query: 151 IIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILP 210
+ + L RL +Q L G +I LE++ S T++ ++ + + +P
Sbjct: 69 LHLAL-------------RLRGGMQIFIKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 115
Query: 211 REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ I + + D +L + ++ L++
Sbjct: 116 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 147
>gi|395328003|gb|EJF60398.1| polyubiquitin [Dichomitus squalens LYAD-421 SS1]
Length = 305
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|61223100|gb|AAX40652.1| polyubiquitin [Oryza sativa Japonica Group]
Length = 381
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLVFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|389742108|gb|EIM83295.1| polyubiquitin [Stereum hirsutum FP-91666 SS1]
gi|449546777|gb|EMD37746.1| polyubiquitin [Ceriporiopsis subvermispora B]
gi|449550837|gb|EMD41801.1| polyubiquitin [Ceriporiopsis subvermispora B]
Length = 457
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|67523087|ref|XP_659604.1| hypothetical protein AN2000.2 [Aspergillus nidulans FGSC A4]
gi|40744745|gb|EAA63901.1| hypothetical protein AN2000.2 [Aspergillus nidulans FGSC A4]
Length = 323
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 27 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 84
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 85 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 137
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 138 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 183
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 184 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 239
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 179 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 236
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 237 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 289
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 290 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 318
>gi|329665078|ref|NP_001193236.1| polyubiquitin-C [Bos taurus]
gi|302595881|sp|P0CH28.1|UBC_BOVIN RecName: Full=Polyubiquitin-C; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
Length = 690
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI++ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>gi|405123351|gb|AFR98116.1| polyubiquitin [Cryptococcus neoformans var. grubii H99]
Length = 381
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|384493519|gb|EIE84010.1| polyubiquitin [Rhizopus delemar RA 99-880]
Length = 305
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K+KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKQKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|115460714|ref|NP_001053957.1| Os04g0628100 [Oryza sativa Japonica Group]
gi|113565528|dbj|BAF15871.1| Os04g0628100 [Oryza sativa Japonica Group]
Length = 392
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 20 TGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 77
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 78 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 130
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 131 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 176
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 177 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 232
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 248 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 305
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 306 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 358
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 359 IFAGKQLED-GRTLADYNIQKESTLHLVLR 387
>gi|170097832|ref|XP_001880135.1| ubiquitin [Laccaria bicolor S238N-H82]
gi|395056|emb|CAA80851.1| ubiquitin [Phanerochaete chrysosporium]
gi|164644573|gb|EDR08822.1| ubiquitin [Laccaria bicolor S238N-H82]
gi|389741436|gb|EIM82624.1| ubiquitin [Stereum hirsutum FP-91666 SS1]
Length = 381
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|62911180|gb|AAX56917.1| polyubiquitin [Gracilaria lemaneiformis]
Length = 457
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T+ ++ + + +P + I + + D +L + ++
Sbjct: 394 TLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 442
>gi|223646966|gb|ACN10241.1| Ubiquitin [Salmo salar]
gi|223672829|gb|ACN12596.1| Ubiquitin [Salmo salar]
Length = 305
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + +
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPGQQRM 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVF 154
F+G + +E LS+Y I++ S + +F
Sbjct: 272 IFAGKQ-PEEGGPLSDYNIQKESTLHLF 298
>gi|169847035|ref|XP_001830230.1| ubiquitin [Coprinopsis cinerea okayama7#130]
gi|116508706|gb|EAU91601.1| ubiquitin [Coprinopsis cinerea okayama7#130]
Length = 305
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|334362473|gb|AEG78435.1| ubiquitin C variant 3 [Epinephelus coioides]
Length = 268
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 67
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 68 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 120
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 166
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 222
>gi|302496049|ref|XP_003010029.1| polyubiquitin UbiD/Ubi4, putative [Arthroderma benhamiae CBS
112371]
gi|315043104|ref|XP_003170928.1| ubiquitin [Arthroderma gypseum CBS 118893]
gi|327295188|ref|XP_003232289.1| polyubiquitin [Trichophyton rubrum CBS 118892]
gi|291173564|gb|EFE29389.1| polyubiquitin UbiD/Ubi4, putative [Arthroderma benhamiae CBS
112371]
gi|311344717|gb|EFR03920.1| ubiquitin [Arthroderma gypseum CBS 118893]
gi|326465461|gb|EGD90914.1| polyubiquitin [Trichophyton rubrum CBS 118892]
gi|326473983|gb|EGD97992.1| polyubiquitin [Trichophyton tonsurans CBS 112818]
gi|326480982|gb|EGE04992.1| ubiquitin [Trichophyton equinum CBS 127.97]
Length = 229
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|367029699|ref|XP_003664133.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
42464]
gi|347011403|gb|AEO58888.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
42464]
Length = 305
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESADSIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ + T+ +++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|298710587|emb|CBJ32017.1| similar to ubiquitin [Ectocarpus siliculosus]
Length = 609
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ +K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ +K+KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ +K+KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|110671522|gb|ABG82012.1| putative ubiquitin B [Diaphorina citri]
gi|387019647|gb|AFJ51941.1| putative ubiquitin B [Crotalus adamanteus]
Length = 229
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|73955934|ref|XP_536651.2| PREDICTED: polyubiquitin-B isoform 1 [Canis lupus familiaris]
gi|345800303|ref|XP_003434677.1| PREDICTED: polyubiquitin-B [Canis lupus familiaris]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|299470074|emb|CBN79251.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 380
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 160 TGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 217
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ +K+KI +G P + L
Sbjct: 218 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRL 270
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 271 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 316
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 317 TLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 372
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 29/238 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I K
Sbjct: 9 TGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK----- 63
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
I +K + +DV+ +DT+ +K+KI +G P + L
Sbjct: 64 -------------------IFVKTLTGKTITLDVEPSDTIDGVKQKIQDKEGIPPDQQRL 104
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNP--PIRRLSFKVQTSSSLLNGA 184
F+G +L+D R LS+Y I++ + L N +++ + RL +Q L G
Sbjct: 105 IFAGKQLED-GRTLSDYNIQKLEDGRT-LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 162
Query: 185 SIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+I L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 163 TITLDVEPSDTIDGVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 220
>gi|104303708|gb|ABF66639.1| ubiquitin [Pelophylax nigromaculatus]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|342298464|emb|CBY46746.1| polyubiquitin 10 protein [Lepidium campestre]
Length = 381
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + V +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|119192382|ref|XP_001246797.1| polyubiquitin [Coccidioides immitis RS]
gi|145258352|ref|XP_001402015.1| ubiquitin [Aspergillus niger CBS 513.88]
gi|258573789|ref|XP_002541076.1| ubiquitin [Uncinocarpus reesii 1704]
gi|296808323|ref|XP_002844500.1| polyubiquitin [Arthroderma otae CBS 113480]
gi|303312875|ref|XP_003066449.1| polyubiquitin, putative [Coccidioides posadasii C735 delta SOWgp]
gi|134074621|emb|CAK44654.1| unnamed protein product [Aspergillus niger]
gi|237901342|gb|EEP75743.1| ubiquitin [Uncinocarpus reesii 1704]
gi|238843983|gb|EEQ33645.1| polyubiquitin [Arthroderma otae CBS 113480]
gi|240106111|gb|EER24304.1| polyubiquitin, putative [Coccidioides posadasii C735 delta SOWgp]
gi|350632449|gb|EHA20817.1| hypothetical protein ASPNIDRAFT_214265 [Aspergillus niger ATCC
1015]
gi|392863964|gb|EJB10724.1| polyubiquitin [Coccidioides immitis RS]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|399217583|emb|CCF74470.1| unnamed protein product [Babesia microti strain RI]
Length = 282
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|444434919|dbj|BAM77034.1| ubiquitin C [Homo sapiens]
Length = 533
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKAITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 424 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 469
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 470 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K K++ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKAI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|336372565|gb|EGO00904.1| hypothetical protein SERLA73DRAFT_178893 [Serpula lacrymans var.
lacrymans S7.3]
Length = 312
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 12/150 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEI-IVFL 155
F+G +L+D R LS+Y I++ S + +VF+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVFV 300
>gi|217074566|gb|ACJ85643.1| unknown [Medicago truncatula]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQNKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|170584490|ref|XP_001897032.1| polyubiquitin precursor [Brugia malayi]
gi|158595567|gb|EDP34110.1| polyubiquitin precursor, putative [Brugia malayi]
Length = 391
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 95 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 152
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 153 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 205
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 206 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 251
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 252 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 307
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 247 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 304
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 305 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 357
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 358 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 386
>gi|92790184|emb|CAI83761.1| Polyubiqutin 2 [Epidinium ecaudatum]
Length = 322
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 103 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 159
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K F + +DV+ +DT+ ++K KI +G P + L
Sbjct: 160 ------LHLVLRLRGGMQIFVKTFTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 213
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 214 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 259
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 260 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 314
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 27 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 83
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 84 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 137
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q G +I
Sbjct: 138 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTFTGKTIT 183
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 184 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 238
>gi|405978203|gb|EKC42613.1| Ubiquitin [Crassostrea gigas]
Length = 222
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 60 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 112
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 113 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 158
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 159 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 214
>gi|164708|gb|AAA31133.1| poly-ubiquitin precursor, partial [Sus scrofa]
Length = 255
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 35 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 92
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 93 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 145
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 146 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 191
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 192 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 249
Query: 247 VSRGGY 252
RGG+
Sbjct: 250 RLRGGF 255
>gi|358370809|dbj|GAA87419.1| polyubiquitin [Aspergillus kawachii IFO 4308]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKNKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|441630341|ref|XP_004089535.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
Length = 590
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 66 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 123
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 124 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 176
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 177 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 222
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 223 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 278
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 294 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 351
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 352 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 404
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 405 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 450
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 451 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 506
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 446 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 503
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 504 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 556
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 557 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 585
>gi|426247174|ref|XP_004017361.1| PREDICTED: polyubiquitin-C-like isoform 1 [Ovis aries]
Length = 462
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI++ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKVKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|157671923|ref|NP_062613.3| polyubiquitin-C [Mus musculus]
gi|342187094|sp|P0CG50.2|UBC_MOUSE RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related 1; Contains:
RecName: Full=Ubiquitin-related 2; Flags: Precursor
Length = 734
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>gi|8394502|ref|NP_059010.1| polyubiquitin-C precursor [Rattus norvegicus]
gi|81872124|sp|Q63429.1|UBC_RAT RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|471154|dbj|BAA04129.1| polyubiquitin [Rattus norvegicus]
Length = 810
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 773
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDY-IFIHKQRIMRDNCSLRW 231
LE++ S +++K + +ED F+ +C+ W
Sbjct: 774 TLEVEPS----------VNTKKVKQEDTRTFLTTVSRKSPSCACSW 809
>gi|118370594|ref|XP_001018498.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300265|gb|EAR98253.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 304
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +D++ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|443713356|gb|ELU06246.1| hypothetical protein CAPTEDRAFT_186294 [Capitella teleta]
Length = 231
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 24/238 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFK 244
LE++ S T+ ++ + + +P + I + + D +L + ++ L++ +
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLCQ 223
>gi|440473707|gb|ELQ42489.1| RING finger protein [Magnaporthe oryzae Y34]
Length = 1058
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPP 166
F+G +L+D R LS+Y I++ S + + L RLR P
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGGMP 306
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 18/109 (16%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-- 65
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 296
Query: 66 ----------------KIDLTINPFLQSSFNQHDKIHIIIKFPSRKFNI 98
K +L NP +++ + +DK I P+ I
Sbjct: 297 LVLRLRGGMPSYNYHLKFELYPNPDPEATLSHYDKNPANIWLPTDAVGI 345
>gi|11024714|ref|NP_061828.1| polyubiquitin-B precursor [Homo sapiens]
gi|57114099|ref|NP_001009117.1| polyubiquitin-B [Pan troglodytes]
gi|157427740|ref|NP_001098779.1| ubiquitin [Sus scrofa]
gi|302563653|ref|NP_001181737.1| polyubiquitin-B [Macaca mulatta]
gi|109113442|ref|XP_001087796.1| PREDICTED: ubiquitin D-like isoform 1 [Macaca mulatta]
gi|109113444|ref|XP_001088043.1| PREDICTED: ubiquitin D-like isoform 3 [Macaca mulatta]
gi|109113446|ref|XP_001087919.1| PREDICTED: ubiquitin D-like isoform 2 [Macaca mulatta]
gi|296201638|ref|XP_002748114.1| PREDICTED: polyubiquitin-B-like isoform 1 [Callithrix jacchus]
gi|296201640|ref|XP_002748115.1| PREDICTED: polyubiquitin-B-like isoform 2 [Callithrix jacchus]
gi|296201642|ref|XP_002748116.1| PREDICTED: polyubiquitin-B-like isoform 3 [Callithrix jacchus]
gi|297272002|ref|XP_002800358.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
gi|297272004|ref|XP_002800359.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
gi|297272006|ref|XP_002800360.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
gi|297272009|ref|XP_002800361.1| PREDICTED: ubiquitin D-like [Macaca mulatta]
gi|297700142|ref|XP_002827118.1| PREDICTED: polyubiquitin-B isoform 2 [Pongo abelii]
gi|301617759|ref|XP_002938289.1| PREDICTED: ubiquitin D isoform 1 [Xenopus (Silurana) tropicalis]
gi|301617761|ref|XP_002938290.1| PREDICTED: ubiquitin D isoform 2 [Xenopus (Silurana) tropicalis]
gi|332226973|ref|XP_003262663.1| PREDICTED: polyubiquitin-B isoform 2 [Nomascus leucogenys]
gi|332267429|ref|XP_003282687.1| PREDICTED: polyubiquitin-B-like isoform 2 [Nomascus leucogenys]
gi|332267433|ref|XP_003282689.1| PREDICTED: polyubiquitin-B-like isoform 4 [Nomascus leucogenys]
gi|348560904|ref|XP_003466253.1| PREDICTED: polyubiquitin-B-like [Cavia porcellus]
gi|390463130|ref|XP_003732975.1| PREDICTED: polyubiquitin-B-like [Callithrix jacchus]
gi|395748608|ref|XP_003778797.1| PREDICTED: polyubiquitin-B [Pongo abelii]
gi|426349328|ref|XP_004042260.1| PREDICTED: polyubiquitin-B isoform 1 [Gorilla gorilla gorilla]
gi|426349330|ref|XP_004042261.1| PREDICTED: polyubiquitin-B isoform 2 [Gorilla gorilla gorilla]
gi|426349332|ref|XP_004042262.1| PREDICTED: polyubiquitin-B isoform 3 [Gorilla gorilla gorilla]
gi|426349334|ref|XP_004042263.1| PREDICTED: polyubiquitin-B isoform 4 [Gorilla gorilla gorilla]
gi|426349336|ref|XP_004042264.1| PREDICTED: polyubiquitin-B isoform 5 [Gorilla gorilla gorilla]
gi|426349338|ref|XP_004042265.1| PREDICTED: polyubiquitin-B isoform 6 [Gorilla gorilla gorilla]
gi|426349340|ref|XP_004042266.1| PREDICTED: polyubiquitin-B isoform 7 [Gorilla gorilla gorilla]
gi|441661901|ref|XP_004091551.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
gi|441661906|ref|XP_004091552.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
gi|441661909|ref|XP_004091553.1| PREDICTED: polyubiquitin-B [Nomascus leucogenys]
gi|441678730|ref|XP_004092833.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
gi|441678733|ref|XP_004092834.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
gi|441678738|ref|XP_004092835.1| PREDICTED: polyubiquitin-B-like [Nomascus leucogenys]
gi|302595874|sp|P0CG67.1|UBB_GORGO RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595875|sp|P0CG47.1|UBB_HUMAN RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595877|sp|P0CG65.1|UBB_PANTR RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595878|sp|P0CG60.1|UBB_PONPY RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|6647298|emb|CAA28495.1| ubiquitin [Homo sapiens]
gi|12653221|gb|AAH00379.1| Ubiquitin B [Homo sapiens]
gi|14424552|gb|AAH09301.1| Ubiquitin B [Homo sapiens]
gi|15451313|dbj|BAB64460.1| hypothetical protein [Macaca fascicularis]
gi|15929389|gb|AAH15127.1| Ubiquitin B [Homo sapiens]
gi|20070823|gb|AAH26301.1| Ubiquitin B [Homo sapiens]
gi|21410249|gb|AAH31027.1| Ubiquitin B [Homo sapiens]
gi|28278206|gb|AAH46123.1| Ubiquitin B [Homo sapiens]
gi|28316344|dbj|BAC56955.1| polyubiquitin B [Homo sapiens]
gi|28316346|dbj|BAC56956.1| polyubiquitin B [Pongo pygmaeus]
gi|28316348|dbj|BAC56957.1| polyubiquitin B [Pan troglodytes]
gi|28316350|dbj|BAC56958.1| polyubiquitin B [Gorilla gorilla]
gi|54697070|gb|AAV38907.1| ubiquitin B [Homo sapiens]
gi|54887368|gb|AAH38999.1| Ubiquitin B [Homo sapiens]
gi|61355410|gb|AAX41137.1| ubiquitin B [synthetic construct]
gi|61359496|gb|AAX41727.1| ubiquitin B [synthetic construct]
gi|119624906|gb|EAX04501.1| ubiquitin B, isoform CRA_a [Homo sapiens]
gi|119624907|gb|EAX04502.1| ubiquitin B, isoform CRA_a [Homo sapiens]
gi|156105183|gb|ABU49130.1| ubiquitin B [Sus scrofa]
gi|156105185|gb|ABU49131.1| ubiquitin B [Sus scrofa]
gi|281339566|gb|EFB15150.1| hypothetical protein PANDA_009728 [Ailuropoda melanoleuca]
gi|343958162|dbj|BAK62936.1| ubiquitin [Pan troglodytes]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|13879398|gb|AAH06680.1| Ubc protein [Mus musculus]
Length = 582
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 545
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T +++
Sbjct: 546 TLDVEPSVTTKKVKQ 560
>gi|118370600|ref|XP_001018501.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300268|gb|EAR98256.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 228
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|353231251|emb|CCD77669.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Length = 379
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 26/236 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I+ +E+IV + RR+ V+T L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQ--TELIVVHENT---------RRMQIFVKT----LTGKTI 163
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 164 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 219
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 235 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 292
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 293 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 345
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 346 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 374
>gi|90655082|gb|ABD96088.1| polyubiquitin [Malus x domestica]
Length = 270
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 50 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 107
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 108 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 160
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 161 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 206
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 207 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 264
Query: 247 VSRGGY 252
RGG+
Sbjct: 265 RLRGGF 270
>gi|89891990|gb|ABD78847.1| ubiquitin C II [Anser anser]
Length = 271
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTP 120
L + I +K + ++V+ +DT+ ++K KI +G P
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 265
>gi|51873890|gb|AAH80583.1| Unknown (protein for IMAGE:2822684), partial [Homo sapiens]
Length = 698
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 22 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 79
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 80 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 132
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 133 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 178
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 179 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 234
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 250 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 307
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 308 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 360
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 361 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 406
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 407 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 462
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 478 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 535
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 536 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 588
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 589 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 634
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 635 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 690
>gi|452820028|gb|EME27076.1| ubiquitin [Galdieria sulphuraria]
Length = 306
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|226484061|emb|CAX79699.1| ubiquitin C [Schistosoma japonicum]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + +
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRV 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|195469924|ref|XP_002099886.1| GE16472 [Drosophila yakuba]
gi|194187410|gb|EDX00994.1| GE16472 [Drosophila yakuba]
Length = 230
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|149535948|ref|XP_001508553.1| PREDICTED: polyubiquitin-C-like [Ornithorhynchus anatinus]
gi|149641796|ref|XP_001508904.1| PREDICTED: polyubiquitin-C-like [Ornithorhynchus anatinus]
gi|301770987|ref|XP_002920911.1| PREDICTED: hypothetical protein LOC100483436 isoform 1 [Ailuropoda
melanoleuca]
gi|301770989|ref|XP_002920912.1| PREDICTED: hypothetical protein LOC100483436 isoform 2 [Ailuropoda
melanoleuca]
gi|197129062|gb|ACH45560.1| putative ubiquitin C variant 7 [Taeniopygia guttata]
gi|197129063|gb|ACH45561.1| putative ubiquitin C variant 7 [Taeniopygia guttata]
Length = 381
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|402888113|ref|XP_003907421.1| PREDICTED: polyubiquitin-C isoform 11 [Papio anubis]
gi|402888115|ref|XP_003907422.1| PREDICTED: polyubiquitin-C isoform 12 [Papio anubis]
gi|426374649|ref|XP_004054182.1| PREDICTED: polyubiquitin-B-like isoform 1 [Gorilla gorilla gorilla]
gi|426374651|ref|XP_004054183.1| PREDICTED: polyubiquitin-B-like isoform 2 [Gorilla gorilla gorilla]
gi|426374653|ref|XP_004054184.1| PREDICTED: polyubiquitin-B-like isoform 3 [Gorilla gorilla gorilla]
gi|426374655|ref|XP_004054185.1| PREDICTED: polyubiquitin-B-like isoform 4 [Gorilla gorilla gorilla]
gi|426374657|ref|XP_004054186.1| PREDICTED: polyubiquitin-B-like isoform 5 [Gorilla gorilla gorilla]
gi|426374659|ref|XP_004054187.1| PREDICTED: polyubiquitin-B-like isoform 6 [Gorilla gorilla gorilla]
gi|426374661|ref|XP_004054188.1| PREDICTED: polyubiquitin-B-like isoform 7 [Gorilla gorilla gorilla]
gi|426374663|ref|XP_004054189.1| PREDICTED: polyubiquitin-B-like isoform 8 [Gorilla gorilla gorilla]
gi|426374665|ref|XP_004054190.1| PREDICTED: polyubiquitin-B-like isoform 9 [Gorilla gorilla gorilla]
gi|15928840|gb|AAH14880.1| UBC protein [Homo sapiens]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|18256864|gb|AAH21837.1| Ubc protein [Mus musculus]
Length = 658
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T +++
Sbjct: 622 TLDVEPSVTTKKVKQ 636
>gi|9837286|gb|AAG00513.1|AF285162_1 polyubiquitin C [Mus musculus]
Length = 886
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 201
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L G + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEGGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 318 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 28/238 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSK-ILP-REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + I P ++ IF KQ + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQ--LEDGRTLSDYNIQKESTLHL 449
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 849
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T +++
Sbjct: 850 TLDVEPSVTTKKVKQ 864
>gi|388518367|gb|AFK47245.1| unknown [Medicago truncatula]
Length = 233
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 30/226 (13%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G +LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 VFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKALTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ----RIMRDN 226
LE++ S T++ ++ + + +P ++ IF KQ R + DN
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADN 211
>gi|308512652|gb|ADO32981.1| polyubiquitin [Eriocheir sinensis]
gi|325556934|gb|ADZ28743.1| ubiquitin C [Eriocheir sinensis]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|226484872|emb|CAX79713.1| ubiquitin C [Schistosoma japonicum]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + +
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRM 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|225709684|gb|ACO10688.1| Ubiquitin [Caligus rogercresseyi]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|194944118|ref|XP_001983129.1| GG19855 [Drosophila erecta]
gi|190647611|gb|EDV45009.1| GG19855 [Drosophila erecta]
Length = 328
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 67 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 124
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 125 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 177
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 178 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 223
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 224 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 279
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 8 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGG 58
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 59 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 117
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I LE++ S T+ ++ +
Sbjct: 118 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 164
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + D +L + ++ L++
Sbjct: 165 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 203
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 103 TDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLR 162
+DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S + + L
Sbjct: 2 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVL------- 53
Query: 163 DNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRI 222
RL +Q L G +I LE++ S T+ ++ + + +P + I +
Sbjct: 54 ------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 107
Query: 223 MRDNCSLRWHGVEYGDILYV 242
+ D +L + ++ L++
Sbjct: 108 LEDGRTLSDYNIQKESTLHL 127
>gi|196016942|ref|XP_002118320.1| hypothetical protein TRIADDRAFT_64418 [Trichoplax adhaerens]
gi|190579096|gb|EDV19200.1| hypothetical protein TRIADDRAFT_64418 [Trichoplax adhaerens]
Length = 457
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|309252551|gb|ADO60140.1| ubiquitin [Beauveria bassiana]
Length = 215
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 24/229 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T++ ++ + + +P + I + + D +L + ++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214
>gi|32400967|gb|AAP80689.1| polyubiquitin [Griffithsia japonica]
Length = 246
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 26 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 83
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 84 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRL 136
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 137 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 182
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 183 TLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 238
>gi|452824412|gb|EME31415.1| ubiquitin [Galdieria sulphuraria]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|46359622|dbj|BAD15290.1| polyubiquitin [Crassostrea gigas]
Length = 685
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>gi|330805887|ref|XP_003290908.1| ubiquitin [Dictyostelium purpureum]
gi|325078946|gb|EGC32571.1| ubiquitin [Dictyostelium purpureum]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|289740633|gb|ADD19064.1| ubiquitin/40S ribosomal protein S27a fusion protein [Glossina
morsitans morsitans]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|157420221|gb|ABV55648.1| Ubc protein, partial [Penaeus monodon]
Length = 432
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 60 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 117
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 118 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 170
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 171 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 216
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 217 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 272
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 1 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGG 51
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 52 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 110
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I LE++ S T+ ++ +
Sbjct: 111 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 157
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + D +L + ++ L++
Sbjct: 158 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 196
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 288 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 345
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 346 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 398
Query: 127 FFSGIELDDEFRNLSEYGI-REFS 149
F+G +L+D R LS+Y I +EF+
Sbjct: 399 IFAGKQLED-GRTLSDYNIQKEFT 421
>gi|302595967|sp|P0CG82.1|UBIQP_TETPY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|578547|emb|CAA43387.1| ubiquitin [Tetrahymena pyriformis]
Length = 381
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|67616274|ref|XP_667472.1| ubiquitin B [Cryptosporidium hominis TU502]
gi|54658618|gb|EAL37248.1| ubiquitin B [Cryptosporidium hominis]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|294887015|ref|XP_002771956.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
gi|239875778|gb|EER03772.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
Length = 230
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|157093211|gb|ABV22260.1| polyubiquitin [Karlodinium micrum]
Length = 536
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|350537449|ref|NP_001232759.1| putative ubiquitin C variant 5 [Taeniopygia guttata]
gi|350537609|ref|NP_001232766.1| putative ubiquitin C variant 14 [Taeniopygia guttata]
gi|291404973|ref|XP_002718831.1| PREDICTED: ubiquitin B-like [Oryctolagus cuniculus]
gi|344297907|ref|XP_003420637.1| PREDICTED: polyubiquitin-B-like [Loxodonta africana]
gi|410979979|ref|XP_003996358.1| PREDICTED: polyubiquitin-B isoform 1 [Felis catus]
gi|410979981|ref|XP_003996359.1| PREDICTED: polyubiquitin-B isoform 2 [Felis catus]
gi|302595871|sp|P0CG53.1|UBB_BOVIN RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|89994036|gb|AAI14002.1| Polyubiquitin [Bos taurus]
gi|197129050|gb|ACH45548.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
gi|197129061|gb|ACH45559.1| putative ubiquitin C variant 5 [Taeniopygia guttata]
gi|197129064|gb|ACH45562.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
gi|197129068|gb|ACH45566.1| putative ubiquitin C variant 14 [Taeniopygia guttata]
gi|296476687|tpg|DAA18802.1| TPA: polyubiquitin [Bos taurus]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|226473056|emb|CAX71214.1| polyubiquitin [Schistosoma japonicum]
Length = 304
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 27/242 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV---F 243
LE++ S T+ ++ + + +P + I + + D +L + ++ L++ F
Sbjct: 166 TLEVEPSDTIENVKAKIPDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRF 225
Query: 244 KG 245
+G
Sbjct: 226 RG 227
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIPDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRFRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|294891345|ref|XP_002773533.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
gi|239878705|gb|EER05349.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
Length = 458
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|223646766|gb|ACN10141.1| Ubiquitin [Salmo salar]
gi|223649344|gb|ACN11430.1| Ubiquitin [Salmo salar]
gi|223672621|gb|ACN12492.1| Ubiquitin [Salmo salar]
Length = 457
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|223646702|gb|ACN10109.1| Ubiquitin [Salmo salar]
gi|223672553|gb|ACN12458.1| Ubiquitin [Salmo salar]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|197129053|gb|ACH45551.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRRRADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|510473|emb|CAA52416.1| polyubiquitin [Artemia franciscana]
Length = 697
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKQGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>gi|440482103|gb|ELQ62622.1| RING finger protein [Magnaporthe oryzae P131]
Length = 1056
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPP 166
F+G +L+D R LS+Y I++ S + + L RLR P
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGGMP 306
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 18/109 (16%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-- 65
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 296
Query: 66 ----------------KIDLTINPFLQSSFNQHDKIHIIIKFPSRKFNI 98
K +L NP +++ + +DK I P+ I
Sbjct: 297 LVLRLRGGMPSYNYHLKFELYPNPDPEATLSHYDKNPANIWLPTDAVGI 345
>gi|118370590|ref|XP_001018496.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|118370606|ref|XP_001018504.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300263|gb|EAR98251.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
gi|89300271|gb|EAR98259.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 304
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|357611679|gb|EHJ67605.1| Ubc protein [Danaus plexippus]
Length = 381
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|209738556|gb|ACI70147.1| Ubiquitin [Salmo salar]
Length = 381
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNP 165
F+G +L+D R LS+Y I++ S + + L RLR P
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGGP 381
>gi|118358270|ref|XP_001012381.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|118364888|ref|XP_001015665.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|1778712|gb|AAC47430.1| polyubiquitin [Tetrahymena thermophila]
gi|89294148|gb|EAR92136.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
gi|89297432|gb|EAR95420.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 381
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|6755919|ref|NP_035794.1| polyubiquitin-B [Mus musculus]
gi|20302085|ref|NP_620250.1| polyubiquitin-B precursor [Rattus norvegicus]
gi|147904884|ref|NP_001090433.1| uncharacterized protein LOC779345 [Xenopus laevis]
gi|302595873|sp|P0CG62.1|UBB_CHICK RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595876|sp|P0CG49.1|UBB_MOUSE RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595879|sp|P0CG51.1|UBB_RAT RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|2118966|pir||I50437 polyubiquitin 4 - chicken
gi|55118|emb|CAA35999.1| ubiquitin [Mus musculus]
gi|212849|gb|AAA49128.1| ubiquitin I [Gallus gallus]
gi|471156|dbj|BAA03983.1| polyubiquitin [Rattus norvegicus]
gi|12840717|dbj|BAB24930.1| unnamed protein product [Mus musculus]
gi|12845838|dbj|BAB26919.1| unnamed protein product [Mus musculus]
gi|12846202|dbj|BAB27071.1| unnamed protein product [Mus musculus]
gi|12850137|dbj|BAB28606.1| unnamed protein product [Mus musculus]
gi|37805416|gb|AAH60312.1| Ubiquitin B [Rattus norvegicus]
gi|47477820|gb|AAH70919.1| Ubiquitin B [Rattus norvegicus]
gi|71682472|gb|AAI00342.1| Ubiquitin B [Mus musculus]
gi|74210110|dbj|BAE21330.1| unnamed protein product [Mus musculus]
gi|89891988|gb|ABD78846.1| ubiquitin C I [Anser anser]
gi|116487680|gb|AAI26016.1| MGC154789 protein [Xenopus laevis]
gi|148678404|gb|EDL10351.1| mCG23377, isoform CRA_a [Mus musculus]
gi|197693972|gb|ACH71654.1| ubiquitin C [Columba livia]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|347966903|ref|XP_550846.3| AGAP001971-PA [Anopheles gambiae str. PEST]
gi|333469848|gb|EAL38503.3| AGAP001971-PA [Anopheles gambiae str. PEST]
Length = 1065
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 849
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 850 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 921 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 978
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 979 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 1031
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 1032 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 1060
>gi|347968153|ref|XP_312337.4| AGAP002599-PA [Anopheles gambiae str. PEST]
gi|333468138|gb|EAA08053.5| AGAP002599-PA [Anopheles gambiae str. PEST]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESPLHLVLR 300
>gi|195403389|ref|XP_002060272.1| GJ16068 [Drosophila virilis]
gi|194140611|gb|EDW57085.1| GJ16068 [Drosophila virilis]
Length = 384
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|195164963|ref|XP_002023315.1| GL20284 [Drosophila persimilis]
gi|194105420|gb|EDW27463.1| GL20284 [Drosophila persimilis]
Length = 382
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|195132655|ref|XP_002010758.1| GI21526 [Drosophila mojavensis]
gi|260830119|ref|XP_002610009.1| hypothetical protein BRAFLDRAFT_131116 [Branchiostoma floridae]
gi|193907546|gb|EDW06413.1| GI21526 [Drosophila mojavensis]
gi|229295371|gb|EEN66019.1| hypothetical protein BRAFLDRAFT_131116 [Branchiostoma floridae]
Length = 609
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|256072199|ref|XP_002572424.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
gi|164510084|emb|CAJ32646.1| ubiquitin [Xantho incisus]
gi|226473060|emb|CAX71216.1| polyubiquitin [Schistosoma japonicum]
Length = 228
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|156087036|ref|XP_001610925.1| polyubiquitin [Babesia bovis T2Bo]
gi|154798178|gb|EDO07357.1| polyubiquitin, putative [Babesia bovis]
Length = 233
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|9837284|gb|AAG00512.1|AF285161_1 polyubiquitin C [Mus musculus]
Length = 734
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 424 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 469
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 470 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ I Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGISPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 541 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 598
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 599 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 651
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 652 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 697
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T +++
Sbjct: 698 TLDVEPSVTTKKVKQ 712
>gi|226469794|emb|CAX76727.1| polyubiquitin [Schistosoma japonicum]
gi|226473062|emb|CAX71217.1| polyubiquitin [Schistosoma japonicum]
gi|226473066|emb|CAX71219.1| polyubiquitin [Schistosoma japonicum]
Length = 304
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|117558776|gb|AAI27396.1| Zgc:153686 [Danio rerio]
Length = 533
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLCLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|157138587|ref|XP_001664266.1| ubiquitin [Aedes aegypti]
gi|108880554|gb|EAT44779.1| AAEL003877-PA [Aedes aegypti]
Length = 761
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 756
>gi|74214198|dbj|BAE40351.1| unnamed protein product [Mus musculus]
Length = 278
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|4105408|gb|AAD02414.1| polyubiquitin [Schistosoma mansoni]
Length = 295
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 1 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 57
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 58 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 111
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 112 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 157
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 158 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 212
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 152 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 209
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 210 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 262
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 263 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 291
>gi|346986309|ref|NP_001231310.1| polyubiquitin [Cricetulus griseus]
gi|2118958|pir||S21083 polyubiquitin 5 - Chinese hamster
gi|49477|emb|CAA42941.1| polyubiquitin [Cricetulus griseus]
gi|25991946|gb|AAN76999.1| poly-ubiquitin [Biomphalaria glabrata]
Length = 381
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|296425005|ref|XP_002842034.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638291|emb|CAZ86225.1| unnamed protein product [Tuber melanosporum]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKGKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|226473058|emb|CAX71215.1| ubiquitin C [Schistosoma japonicum]
Length = 456
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLLGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 TFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLTFAGKQLEDGRTLSDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 424 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 452
>gi|226499354|ref|NP_001147027.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
gi|195606596|gb|ACG25128.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
Length = 311
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 91 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 148
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 149 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 201
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 202 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 247
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 248 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 303
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 18/236 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG ++ P +
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRNLIFSPFARNA--- 65
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
+P + K+ I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 66 HTARSPISDPRSPRRSKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 125
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 126 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 171
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 172 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 227
>gi|148687613|gb|EDL19560.1| ubiquitin C, isoform CRA_a [Mus musculus]
gi|148687614|gb|EDL19561.1| ubiquitin C, isoform CRA_a [Mus musculus]
Length = 614
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 269 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 326
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 327 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 379
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 380 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 425
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 426 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 481
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 421 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 478
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 479 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 531
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 532 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 577
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T +++
Sbjct: 578 TLDVEPSVTTKKVKQ 592
>gi|443688720|gb|ELT91320.1| hypothetical protein CAPTEDRAFT_162204 [Capitella teleta]
Length = 457
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|432899994|ref|XP_004076672.1| PREDICTED: polyubiquitin-C-like [Oryzias latipes]
Length = 533
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|197129055|gb|ACH45553.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
gi|197129057|gb|ACH45555.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
Length = 412
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGRTI 317
Query: 187 PLEMQDSSTVNELRHLLLSSKILP 210
LE++ S T+ ++ + + +P
Sbjct: 318 TLEVEPSDTIENVKAKIQDKEGIP 341
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K R ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSG 130
F+G
Sbjct: 348 IFAG 351
>gi|195042539|ref|XP_001991451.1| GH12661 [Drosophila grimshawi]
gi|193901209|gb|EDW00076.1| GH12661 [Drosophila grimshawi]
Length = 699
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
F+G +L+D R LS+Y I++ S
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKES 597
>gi|156358687|ref|XP_001624647.1| predicted protein [Nematostella vectensis]
gi|170055263|ref|XP_001863505.1| polyubiquitin [Culex quinquefasciatus]
gi|156211440|gb|EDO32547.1| predicted protein [Nematostella vectensis]
gi|167875249|gb|EDS38632.1| polyubiquitin [Culex quinquefasciatus]
Length = 533
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|145503723|ref|XP_001437835.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404993|emb|CAK70438.1| unnamed protein product [Paramecium tetraurelia]
Length = 271
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I IK R N+DV+ TD+V SLK++I +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFIKTLTGRLINLDVESTDSVESLKKQIQDKEGIPPNQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLR 162
FSG +L+DE + L EY + S I + L+ M R R
Sbjct: 121 FSGHQLEDE-KTLLEYNVENESTIHLVLRLMVRCR 154
>gi|291413653|ref|XP_002723083.1| PREDICTED: ubiquitin B [Oryctolagus cuniculus]
gi|55977015|gb|AAV68344.1| ubiquitin C splice variant [Homo sapiens]
gi|357610605|gb|EHJ67056.1| putative ubiquitin C variant 2 [Danaus plexippus]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|73695428|gb|AAI03478.1| Ubc protein [Rattus norvegicus]
Length = 430
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDY-IFIHKQRIMRDNCSLRW 231
L+++ S +++K + +ED F+ +C+ W
Sbjct: 394 TLDVEPS----------VNTKKVKQEDTRTFLTTVSRKSPSCACSW 429
>gi|213510698|ref|NP_001133175.1| polyubiquitin [Salmo salar]
gi|350534516|ref|NP_001232808.1| uncharacterized protein LOC100228572 [Taeniopygia guttata]
gi|118098426|ref|XP_415105.2| PREDICTED: polyubiquitin-B isoform 2 [Gallus gallus]
gi|118098428|ref|XP_001233377.1| PREDICTED: polyubiquitin-B isoform 1 [Gallus gallus]
gi|432884643|ref|XP_004074520.1| PREDICTED: polyubiquitin-B-like isoform 1 [Oryzias latipes]
gi|432884645|ref|XP_004074521.1| PREDICTED: polyubiquitin-B-like isoform 2 [Oryzias latipes]
gi|432884647|ref|XP_004074522.1| PREDICTED: polyubiquitin-B-like isoform 3 [Oryzias latipes]
gi|432884649|ref|XP_004074523.1| PREDICTED: polyubiquitin-B-like isoform 4 [Oryzias latipes]
gi|449476588|ref|XP_004176460.1| PREDICTED: polyubiquitin-B [Taeniopygia guttata]
gi|104829|pir||S13928 ubiquitin precursor - chicken
gi|533889|gb|AAA29362.1| polyubiquitin [Anopheles gambiae]
gi|197129058|gb|ACH45556.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
gi|197632335|gb|ACH70891.1| polyubiquitin [Salmo salar]
gi|223647274|gb|ACN10395.1| Ubiquitin [Salmo salar]
gi|223673153|gb|ACN12758.1| Ubiquitin [Salmo salar]
gi|449279318|gb|EMC86953.1| Ubiquitin [Columba livia]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|335345806|gb|AEH41483.1| ubiquitin [Endocarpon pusillum]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 24/229 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T++ ++ + + +P + I + + D +L + ++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEFT-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|323714263|ref|NP_001071272.2| ubuquitin c [Danio rerio]
Length = 533
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|270010560|gb|EFA07008.1| hypothetical protein TcasGA2_TC009978 [Tribolium castaneum]
Length = 685
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>gi|226477470|emb|CAX72429.1| ubiquitin C [Schistosoma japonicum]
gi|226477472|emb|CAX72430.1| ubiquitin C [Schistosoma japonicum]
gi|226477474|emb|CAX72431.1| ubiquitin C [Schistosoma japonicum]
gi|226477476|emb|CAX72432.1| ubiquitin C [Schistosoma japonicum]
gi|226477478|emb|CAX72433.1| ubiquitin C [Schistosoma japonicum]
gi|226477480|emb|CAX72434.1| ubiquitin C [Schistosoma japonicum]
gi|226484001|emb|CAX79669.1| ubiquitin C [Schistosoma japonicum]
gi|226484003|emb|CAX79670.1| ubiquitin C [Schistosoma japonicum]
gi|226484055|emb|CAX79696.1| ubiquitin C [Schistosoma japonicum]
gi|226484057|emb|CAX79697.1| ubiquitin C [Schistosoma japonicum]
gi|226484059|emb|CAX79698.1| ubiquitin C [Schistosoma japonicum]
gi|226484063|emb|CAX79700.1| ubiquitin C [Schistosoma japonicum]
gi|226484065|emb|CAX79701.1| ubiquitin C [Schistosoma japonicum]
gi|226484067|emb|CAX79702.1| ubiquitin C [Schistosoma japonicum]
gi|226484069|emb|CAX79703.1| ubiquitin C [Schistosoma japonicum]
gi|226484071|emb|CAX79704.1| ubiquitin C [Schistosoma japonicum]
gi|226484073|emb|CAX79705.1| ubiquitin C [Schistosoma japonicum]
gi|226484075|emb|CAX79706.1| ubiquitin C [Schistosoma japonicum]
gi|226484077|emb|CAX79707.1| ubiquitin C [Schistosoma japonicum]
gi|226484079|emb|CAX79708.1| ubiquitin C [Schistosoma japonicum]
gi|226484083|emb|CAX79710.1| ubiquitin C [Schistosoma japonicum]
gi|226484311|emb|CAX79711.1| ubiquitin C [Schistosoma japonicum]
gi|226484870|emb|CAX79712.1| ubiquitin C [Schistosoma japonicum]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|195125345|ref|XP_002007139.1| GI12770 [Drosophila mojavensis]
gi|193918748|gb|EDW17615.1| GI12770 [Drosophila mojavensis]
Length = 991
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 849
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 850 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 845 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 902
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 903 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 955
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 956 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 984
>gi|62089150|dbj|BAD93019.1| ubiquitin C variant [Homo sapiens]
Length = 1309
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 25 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 82
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 83 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 135
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 136 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 181
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 182 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 237
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 253 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 310
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 311 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 363
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 364 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 409
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 410 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 465
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 481 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 538
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 539 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 591
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 592 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 637
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 638 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 693
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 709 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 766
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 767 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 819
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 820 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 865
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 866 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 921
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 937 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 994
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 995 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 1047
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 1048 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 1093
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 1094 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1149
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 1165 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 1222
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 1223 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 1275
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L++ R LS+Y I++ S + + L+
Sbjct: 1276 IFAGKQLEN-GRTLSDYNIQKESTLHLVLR 1304
>gi|357148706|ref|XP_003574865.1| PREDICTED: polyubiquitin-like [Brachypodium distachyon]
Length = 341
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 45 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 102
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 103 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 155
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 156 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 201
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 202 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 257
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 197 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 254
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 255 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 307
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 308 IFAGKQLED-GRTLADYNIQKESTLHLVLR 336
>gi|334324804|ref|XP_001373422.2| PREDICTED: polyubiquitin-C-like [Monodelphis domestica]
Length = 761
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 756
>gi|327291982|ref|XP_003230699.1| PREDICTED: polyubiquitin-C-like [Anolis carolinensis]
Length = 685
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>gi|170034793|ref|XP_001845257.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876387|gb|EDS39770.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1065
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 849
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 850 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 921 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 978
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 979 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 1031
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 1032 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 1060
>gi|118484244|gb|ABK94002.1| unknown [Populus trichocarpa]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 299
Query: 247 VSRGGY 252
RGG+
Sbjct: 300 RLRGGF 305
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + D I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|213982779|ref|NP_001135561.1| uncharacterized protein LOC100216108 [Xenopus (Silurana)
tropicalis]
gi|126323857|ref|XP_001366753.1| PREDICTED: polyubiquitin [Monodelphis domestica]
gi|332254371|ref|XP_003276301.1| PREDICTED: polyubiquitin-C isoform 1 [Nomascus leucogenys]
gi|332254373|ref|XP_003276302.1| PREDICTED: polyubiquitin-C isoform 2 [Nomascus leucogenys]
gi|332254377|ref|XP_003276304.1| PREDICTED: polyubiquitin-C isoform 4 [Nomascus leucogenys]
gi|332254379|ref|XP_003276305.1| PREDICTED: polyubiquitin-C isoform 5 [Nomascus leucogenys]
gi|441630332|ref|XP_004089532.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630335|ref|XP_004089533.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630338|ref|XP_004089534.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630344|ref|XP_004089536.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630354|ref|XP_004089537.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630357|ref|XP_004089538.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630362|ref|XP_004089539.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630365|ref|XP_004089540.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|119618869|gb|EAW98463.1| ubiquitin C, isoform CRA_a [Homo sapiens]
gi|119618870|gb|EAW98464.1| ubiquitin C, isoform CRA_a [Homo sapiens]
gi|119618871|gb|EAW98465.1| ubiquitin C, isoform CRA_a [Homo sapiens]
gi|119618872|gb|EAW98466.1| ubiquitin C, isoform CRA_a [Homo sapiens]
gi|195539774|gb|AAI68051.1| Unknown (protein for MGC:185560) [Xenopus (Silurana) tropicalis]
gi|444434915|dbj|BAM77032.1| ubiquitin C [Homo sapiens]
Length = 533
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|21428336|gb|AAM49828.1| GH17513p [Drosophila melanogaster]
Length = 306
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|290543384|ref|NP_001166536.1| polyubiquitin-B [Cavia porcellus]
gi|302595872|sp|P0CG54.1|UBB_CAVPO RecName: Full=Polyubiquitin-B; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|1197093|dbj|BAA11842.1| ubiquitin [Cavia porcellus]
Length = 311
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNP 165
F+G +L+D R LS+Y I++ S + + L+ + +P
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLRLRGGVYASP 309
>gi|346986300|ref|NP_001231307.1| polyubiquitin [Cricetulus griseus]
gi|2627133|dbj|BAA23488.1| polyubiquitin [Cricetulus griseus]
Length = 1038
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 849
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 850 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y +++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNVQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 845 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 902
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 903 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 955
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 956 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 1001
Query: 187 PLEMQDSSTVNELRH 201
LE++ S+T+ + +
Sbjct: 1002 TLEVEPSNTIKKSKQ 1016
>gi|444434917|dbj|BAM77033.1| ubiquitin C [Homo sapiens]
Length = 685
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPCDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|340058|gb|AAA36787.1| ubiquitin precursor, partial [Homo sapiens]
Length = 269
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 49 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 106
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 107 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 159
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 160 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 205
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 206 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 261
>gi|384252612|gb|EIE26088.1| hexaubiquitin protein [Coccomyxa subellipsoidea C-169]
Length = 457
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|260806905|ref|XP_002598324.1| hypothetical protein BRAFLDRAFT_113894 [Branchiostoma floridae]
gi|229283596|gb|EEN54336.1| hypothetical protein BRAFLDRAFT_113894 [Branchiostoma floridae]
Length = 600
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVF 243
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLI 450
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 456 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 513
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 514 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 566
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 567 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 595
>gi|195448336|ref|XP_002071613.1| GK10077 [Drosophila willistoni]
gi|194167698|gb|EDW82599.1| GK10077 [Drosophila willistoni]
Length = 610
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|195170771|ref|XP_002026185.1| GL16204 [Drosophila persimilis]
gi|194111065|gb|EDW33108.1| GL16204 [Drosophila persimilis]
Length = 307
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|194866181|ref|XP_001971796.1| GG14240 [Drosophila erecta]
gi|190653579|gb|EDV50822.1| GG14240 [Drosophila erecta]
Length = 991
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 849
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 850 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 845 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 902
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 903 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 955
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 956 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 984
>gi|194762588|ref|XP_001963416.1| GF20300 [Drosophila ananassae]
gi|190629075|gb|EDV44492.1| GF20300 [Drosophila ananassae]
gi|389610665|dbj|BAM18944.1| ubiquitin [Papilio polytes]
Length = 610
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|157138589|ref|XP_001664267.1| ubiquitin [Aedes aegypti]
gi|241694258|ref|XP_002402192.1| ubiquitin/40S ribosomal protein S27A fusion, putative [Ixodes
scapularis]
gi|108880555|gb|EAT44780.1| AAEL003877-PB [Aedes aegypti]
gi|215504684|gb|EEC14178.1| ubiquitin/40S ribosomal protein S27A fusion, putative [Ixodes
scapularis]
Length = 609
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|148235355|ref|NP_001080865.1| ubiquitin C [Xenopus laevis]
gi|32766481|gb|AAH54976.1| Ubc-prov protein [Xenopus laevis]
Length = 609
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|185135461|ref|NP_001117778.1| polyubiquitin [Oncorhynchus mykiss]
gi|157110833|ref|XP_001651266.1| ubiquitin [Aedes aegypti]
gi|13991678|gb|AAK51460.1|AF361365_1 polyubiquitin [Oncorhynchus mykiss]
gi|108883867|gb|EAT48092.1| AAEL000795-PA [Aedes aegypti]
gi|209149518|gb|ACI32978.1| Ubiquitin [Salmo salar]
gi|209737152|gb|ACI69445.1| Ubiquitin [Salmo salar]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|86515356|ref|NP_001034506.1| polyubiquitin [Tribolium castaneum]
gi|21314343|gb|AAM46898.1|AF506022_1 polyubiquitin [Tribolium castaneum]
Length = 685
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 28/238 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P ++ IF KQ + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQ--LEDGRTLSDYNIQKESTLHL 449
>gi|208022675|ref|NP_001129078.1| polyubiquitin-C [Pan troglodytes]
gi|302595944|sp|P0CG64.1|UBC_PANTR RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595946|sp|P0CG61.1|UBC_PONPY RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|28316338|dbj|BAC56952.1| polyubiquitin C [Pan troglodytes]
gi|28316342|dbj|BAC56954.1| polyubiquitin C [Pongo pygmaeus]
Length = 761
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 756
>gi|66358028|ref|XP_626192.1| polyubiquitin with 3 Ub domains [Cryptosporidium parvum Iowa II]
gi|46227264|gb|EAK88214.1| polyubiquitin with 3 Ub domains [Cryptosporidium parvum Iowa II]
Length = 241
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 21 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 78
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 79 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 131
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 132 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 177
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 178 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 233
>gi|449266037|gb|EMC77164.1| Ubiquitin, partial [Columba livia]
Length = 290
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIR 146
F+G +L+D R LS+Y I+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQ 290
>gi|391358178|sp|P0CG48.3|UBC_HUMAN RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|340068|gb|AAA36789.1| ubiquitin [Homo sapiens]
gi|2647408|dbj|BAA23632.1| polyubiquitin UbC [Homo sapiens]
gi|24657522|gb|AAH39193.1| Ubiquitin C [Homo sapiens]
gi|28316336|dbj|BAC56951.1| polyubiquitin C [Homo sapiens]
gi|440903539|gb|ELR54183.1| Polyubiquitin-C, partial [Bos grunniens mutus]
Length = 685
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>gi|55742507|ref|NP_001006688.1| ubiquitin C [Xenopus (Silurana) tropicalis]
gi|297693402|ref|XP_002824008.1| PREDICTED: polyubiquitin-C isoform 1 [Pongo abelii]
gi|297693404|ref|XP_002824009.1| PREDICTED: polyubiquitin-C isoform 2 [Pongo abelii]
gi|297693406|ref|XP_002824010.1| PREDICTED: polyubiquitin-C isoform 3 [Pongo abelii]
gi|297693408|ref|XP_002824011.1| PREDICTED: polyubiquitin-C isoform 4 [Pongo abelii]
gi|297693416|ref|XP_002824015.1| PREDICTED: polyubiquitin-C isoform 8 [Pongo abelii]
gi|297693418|ref|XP_002824016.1| PREDICTED: polyubiquitin-C isoform 9 [Pongo abelii]
gi|297693420|ref|XP_002824017.1| PREDICTED: polyubiquitin-C isoform 10 [Pongo abelii]
gi|395745069|ref|XP_003778208.1| PREDICTED: polyubiquitin-C [Pongo abelii]
gi|302595941|sp|P0CG66.1|UBC_GORGO RecName: Full=Polyubiquitin-C; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|28316340|dbj|BAC56953.1| polyubiquitin C [Gorilla gorilla]
gi|49257812|gb|AAH74652.1| ubiquitin C [Xenopus (Silurana) tropicalis]
gi|89271842|emb|CAJ82066.1| novel protein [Xenopus (Silurana) tropicalis]
gi|444434923|dbj|BAM77036.1| ubiquitin C [Homo sapiens]
Length = 609
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|356548684|ref|XP_003542730.1| PREDICTED: polyubiquitin 10-like [Glycine max]
Length = 457
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 451
Query: 247 VSRGGY 252
RGG+
Sbjct: 452 RLRGGF 457
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|340374850|ref|XP_003385950.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
Length = 381
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|321469467|gb|EFX80447.1| hypothetical protein DAPPUDRAFT_243700 [Daphnia pulex]
Length = 764
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 756
>gi|226469792|emb|CAX76726.1| polyubiquitin [Schistosoma japonicum]
Length = 228
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 SLEVEPSDTIENVKAKIPDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|242096698|ref|XP_002438839.1| hypothetical protein SORBIDRAFT_10g027030 [Sorghum bicolor]
gi|241917062|gb|EER90206.1| hypothetical protein SORBIDRAFT_10g027030 [Sorghum bicolor]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKDSTLHL 221
>gi|294885539|ref|XP_002771351.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
gi|239874907|gb|EER03167.1| polyubiquitin, putative [Perkinsus marinus ATCC 50983]
Length = 458
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTDKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|410914740|ref|XP_003970845.1| PREDICTED: polyubiquitin-B-like isoform 1 [Takifugu rubripes]
gi|410914742|ref|XP_003970846.1| PREDICTED: polyubiquitin-B-like isoform 2 [Takifugu rubripes]
gi|221222312|gb|ACM09817.1| Ubiquitin [Salmo salar]
gi|334362439|gb|AEG78418.1| Ubiquitin C variant 2 [Epinephelus coioides]
Length = 305
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|189441656|gb|AAI67447.1| Zgc:172187 protein [Danio rerio]
Length = 458
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|73995130|ref|XP_853060.1| PREDICTED: polyubiquitin-C isoform 2 [Canis lupus familiaris]
gi|149633339|ref|XP_001509120.1| PREDICTED: polyubiquitin-C [Ornithorhynchus anatinus]
gi|194214411|ref|XP_001499132.2| PREDICTED: polyubiquitin [Equus caballus]
gi|297263837|ref|XP_002798872.1| PREDICTED: hypothetical protein LOC712934 isoform 3 [Macaca
mulatta]
gi|344297276|ref|XP_003420325.1| PREDICTED: polyubiquitin-C-like [Loxodonta africana]
gi|345791301|ref|XP_003433478.1| PREDICTED: polyubiquitin-C isoform 1 [Canis lupus familiaris]
gi|390468353|ref|XP_003733926.1| PREDICTED: polyubiquitin-C-like [Callithrix jacchus]
gi|343958420|dbj|BAK63065.1| ubiquitin [Pan troglodytes]
gi|343959062|dbj|BAK63386.1| ubiquitin [Pan troglodytes]
gi|431912123|gb|ELK14261.1| Ubiquitin [Pteropus alecto]
Length = 381
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|56753927|gb|AAW25156.1| SJCHGC00176 protein [Schistosoma japonicum]
Length = 457
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|58618886|gb|AAH89218.1| Ubc protein, partial [Rattus norvegicus]
Length = 656
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 7 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 64
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 65 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 117
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 118 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 163
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 164 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 219
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 235 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 292
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 293 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 345
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 346 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 391
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 392 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 447
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 33/225 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 463 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 520
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 521 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 573
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 574 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 619
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRW 231
L+++ S VN + K+ + F+ +C+ W
Sbjct: 620 TLDVEPS--VN-------TKKVKQEDTRTFLTTVSRKSPSCACSW 655
>gi|221048065|gb|ACL98140.1| ubiquitin C variant [Epinephelus coioides]
Length = 255
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|195011548|ref|XP_001983203.1| GH15714 [Drosophila grimshawi]
gi|193896685|gb|EDV95551.1| GH15714 [Drosophila grimshawi]
Length = 535
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|194749344|ref|XP_001957099.1| GF10254 [Drosophila ananassae]
gi|190624381|gb|EDV39905.1| GF10254 [Drosophila ananassae]
Length = 837
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 832
>gi|157093353|gb|ABV22331.1| ubiquitin [Noctiluca scintillans]
Length = 302
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYSIQKESTLHLVLR 300
>gi|426247176|ref|XP_004017362.1| PREDICTED: polyubiquitin-C-like isoform 2 [Ovis aries]
Length = 310
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNP 165
F+G +L+D R LS+Y I++ S + + L+ + +P
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLRLRGGVLSSP 309
>gi|2627131|dbj|BAA23487.1| polyubiquitin [Cricetulus griseus]
Length = 886
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 849
Query: 187 PLEMQDSSTVNELRH 201
LE++ S+T+ + +
Sbjct: 850 TLEVEPSNTIKKSKQ 864
>gi|195491528|ref|XP_002093599.1| GE18016 [Drosophila yakuba]
gi|194179700|gb|EDW93311.1| GE18016 [Drosophila yakuba]
Length = 317
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNR 160
F+G +L+D R LS+Y I++ S + + L+ R
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLRXXXR 304
>gi|221059958|ref|XP_002260624.1| ubiquitin [Plasmodium knowlesi strain H]
gi|193810698|emb|CAQ42596.1| ubiquitin, putative [Plasmodium knowlesi strain H]
Length = 609
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|19483857|gb|AAH25894.1| Ubc protein [Mus musculus]
gi|23958188|gb|AAH36303.1| Ubc protein [Mus musculus]
gi|26372121|dbj|BAB27296.2| unnamed protein product [Mus musculus]
gi|62825885|gb|AAH94012.1| Ubc protein [Mus musculus]
Length = 354
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T +++
Sbjct: 318 TLDVEPSVTTKKVKQ 332
>gi|2627129|dbj|BAA23486.1| polyubiquitin [Homo sapiens]
Length = 609
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G EV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITXEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|18412785|ref|NP_567286.1| ubiquitin 11 [Arabidopsis thaliana]
gi|30679296|ref|NP_849291.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|79325001|ref|NP_001031585.1| ubiquitin 11 [Arabidopsis thaliana]
gi|186511479|ref|NP_567247.2| polyubiquitin 14 [Arabidopsis thaliana]
gi|186511546|ref|NP_001118936.1| ubiquitin 11 [Arabidopsis thaliana]
gi|224078711|ref|XP_002305607.1| predicted protein [Populus trichocarpa]
gi|224169339|ref|XP_002339256.1| predicted protein [Populus trichocarpa]
gi|302595976|sp|P0CH33.1|UBQ11_ARATH RecName: Full=Polyubiquitin 11; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|5732081|gb|AAD48980.1|AF162444_12 contains similarity to Pfam family PF00240 - Ubiquitin family;
score=526.5, E=1.9e-154, N=3 [Arabidopsis thaliana]
gi|3882081|emb|CAA10056.1| polyubiquitin [Vicia faba]
gi|7267264|emb|CAB81047.1| AT4g05050 [Arabidopsis thaliana]
gi|12583569|emb|CAC27335.1| putative polyubiquitin [Picea abies]
gi|15450587|gb|AAK96565.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
gi|15810026|gb|AAL06940.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
gi|15982846|gb|AAL09770.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
gi|20466093|gb|AAM19968.1| AT4g05050/T32N4_13 [Arabidopsis thaliana]
gi|24899675|gb|AAN65052.1| Unknown protein [Arabidopsis thaliana]
gi|56481667|gb|AAV92464.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481669|gb|AAV92465.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481671|gb|AAV92466.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481673|gb|AAV92467.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481675|gb|AAV92468.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481677|gb|AAV92469.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481679|gb|AAV92470.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481681|gb|AAV92471.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481683|gb|AAV92472.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481685|gb|AAV92473.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481687|gb|AAV92474.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481689|gb|AAV92475.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481691|gb|AAV92476.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481693|gb|AAV92477.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481695|gb|AAV92478.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481697|gb|AAV92479.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481699|gb|AAV92480.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481701|gb|AAV92481.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481703|gb|AAV92482.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481705|gb|AAV92483.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481707|gb|AAV92484.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481709|gb|AAV92485.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481711|gb|AAV92486.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481713|gb|AAV92487.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481715|gb|AAV92488.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481717|gb|AAV92489.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|56481719|gb|AAV92490.1| polyubiquitin [Pseudotsuga menziesii var. menziesii]
gi|110740912|dbj|BAE98552.1| hypothetical protein [Arabidopsis thaliana]
gi|222848571|gb|EEE86118.1| predicted protein [Populus trichocarpa]
gi|222874764|gb|EEF11895.1| predicted protein [Populus trichocarpa]
gi|332656844|gb|AEE82244.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|332656845|gb|AEE82245.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|332657068|gb|AEE82468.1| ubiquitin 11 [Arabidopsis thaliana]
gi|332657069|gb|AEE82469.1| ubiquitin 11 [Arabidopsis thaliana]
gi|332657070|gb|AEE82470.1| ubiquitin 11 [Arabidopsis thaliana]
gi|399513946|gb|AFP43343.1| polyubiquitin [Arabidopsis thaliana]
Length = 229
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|158753|gb|AAA28997.1| ubiquitin [Drosophila melanogaster]
Length = 231
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|24640086|ref|NP_727078.1| Ubiquitin-5E [Drosophila melanogaster]
gi|194896187|ref|XP_001978429.1| GG17684 [Drosophila erecta]
gi|22831806|gb|AAF46142.3| Ubiquitin-5E [Drosophila melanogaster]
gi|190650078|gb|EDV47356.1| GG17684 [Drosophila erecta]
gi|208879484|gb|ACI31287.1| GH17761p [Drosophila melanogaster]
Length = 534
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|350537977|ref|NP_001232075.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
gi|197129056|gb|ACH45554.1| putative ubiquitin C variant 2 [Taeniopygia guttata]
Length = 248
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|195137906|ref|XP_002012597.1| GI14272 [Drosophila mojavensis]
gi|193906411|gb|EDW05278.1| GI14272 [Drosophila mojavensis]
Length = 668
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|61369554|gb|AAX43350.1| ubiquitin B [synthetic construct]
Length = 230
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|388578851|gb|EIM19184.1| ubiquitin [Wallemia sebi CBS 633.66]
Length = 701
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 212 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 269
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 270 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQDKEGIPPDQQRL 322
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 323 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQVFVKTLTGKTI 368
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 369 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 424
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 47/268 (17%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV Q+ + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 288 TGKTITLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 345
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + + +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 346 -------LHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 398
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDN-PPI--------------RRLS 171
F+G +L+D R LS+Y I++ S + + L RLR PP R LS
Sbjct: 399 IFAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGGIPPDQQRLIFAGKQLEDGRTLS 453
Query: 172 -FKVQTSSSL----------------LNGASIPLEMQDSSTVNELRHLLLSSKILPREDY 214
+ +Q S+L L G +I LE++ S T++ ++ + + +P +
Sbjct: 454 DYNIQKESTLHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQ 513
Query: 215 IFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 514 RLIFAGKQLEDGRTLSDYNIQKESTLHL 541
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ T++ ++ + + +P ++ IF KQ
Sbjct: 166 TLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQ 201
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 557 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 614
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + + +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 615 -------LHLVLRLRGGMQVFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 667
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 668 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 696
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 57/278 (20%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-- 65
G LEV Q+ + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 144
Query: 66 ---KIDLTINPFLQS-----------SFNQHDKIHIIIK--------------------- 90
++ + F+++ S + D + I+
Sbjct: 145 LVLRLRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED 204
Query: 91 ------FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYG 144
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 205 GLFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYN 263
Query: 145 IREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLL 204
I++ S + + L RL +Q L G +I LE++ T++ ++ +
Sbjct: 264 IQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVESQDTIDNVKTKIQ 310
Query: 205 SSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + D +L + ++ L++
Sbjct: 311 DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 348
>gi|328864943|gb|EGG13329.1| hypothetical protein DFA_11090 [Dictyostelium fasciculatum]
Length = 356
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
Query: 29 IEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHII 88
++ + IP Q L +G +L DG + DY I KE T L + I
Sbjct: 233 VKTLTGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQIF 283
Query: 89 IK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIRE 147
+K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++
Sbjct: 284 VKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQK 342
Query: 148 FSEIIVFLK 156
S + + L+
Sbjct: 343 ESTLHLVLR 351
>gi|158256510|dbj|BAF84228.1| unnamed protein product [Homo sapiens]
Length = 609
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSATIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|156101796|ref|XP_001616591.1| polyubiquitin 5 [Plasmodium vivax Sal-1]
gi|148805465|gb|EDL46864.1| polyubiquitin 5, putative [Plasmodium vivax]
Length = 381
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|302393781|sp|P62976.2|UBIQP_CRIGR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related 1; Contains:
RecName: Full=Ubiquitin-related 2; Flags: Precursor
gi|940395|dbj|BAA09853.1| polyubiquitin [Cricetulus sp.]
Length = 658
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKQGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRH 201
LE++ S+T+ + +
Sbjct: 622 TLEVEPSNTIKKSKQ 636
>gi|163573|gb|AAA30719.1| polyubiquitin, partial [Bos taurus]
Length = 245
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 20 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 77
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 78 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 130
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 131 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 176
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 177 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 232
>gi|349592832|gb|AEP96154.1| ubiquitin C-like protein [Euplectes orix]
Length = 224
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T+ ++ + + +P + I + + D +L + ++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQXLIFAGKQLEDGRTLSDYNIQ 214
>gi|330805713|ref|XP_003290823.1| hypothetical protein DICPUDRAFT_92560 [Dictyostelium purpureum]
gi|325079033|gb|EGC32654.1| hypothetical protein DICPUDRAFT_92560 [Dictyostelium purpureum]
Length = 229
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|297263833|ref|XP_002798871.1| PREDICTED: hypothetical protein LOC712934 isoform 2 [Macaca
mulatta]
gi|297263835|ref|XP_001102090.2| PREDICTED: hypothetical protein LOC712934 isoform 1 [Macaca
mulatta]
gi|297263839|ref|XP_002798873.1| PREDICTED: hypothetical protein LOC712934 isoform 4 [Macaca
mulatta]
gi|297263841|ref|XP_002798874.1| PREDICTED: hypothetical protein LOC712934 isoform 5 [Macaca
mulatta]
gi|297263843|ref|XP_002798875.1| PREDICTED: hypothetical protein LOC712934 isoform 6 [Macaca
mulatta]
gi|297263845|ref|XP_002798876.1| PREDICTED: hypothetical protein LOC712934 isoform 7 [Macaca
mulatta]
gi|297263847|ref|XP_002798877.1| PREDICTED: hypothetical protein LOC712934 isoform 8 [Macaca
mulatta]
gi|297263849|ref|XP_002798878.1| PREDICTED: hypothetical protein LOC712934 isoform 9 [Macaca
mulatta]
gi|402888093|ref|XP_003907411.1| PREDICTED: polyubiquitin-C isoform 1 [Papio anubis]
gi|402888095|ref|XP_003907412.1| PREDICTED: polyubiquitin-C isoform 2 [Papio anubis]
gi|402888097|ref|XP_003907413.1| PREDICTED: polyubiquitin-C isoform 3 [Papio anubis]
gi|402888099|ref|XP_003907414.1| PREDICTED: polyubiquitin-C isoform 4 [Papio anubis]
gi|402888101|ref|XP_003907415.1| PREDICTED: polyubiquitin-C isoform 5 [Papio anubis]
gi|402888103|ref|XP_003907416.1| PREDICTED: polyubiquitin-C isoform 6 [Papio anubis]
gi|402888105|ref|XP_003907417.1| PREDICTED: polyubiquitin-C isoform 7 [Papio anubis]
gi|402888107|ref|XP_003907418.1| PREDICTED: polyubiquitin-C isoform 8 [Papio anubis]
gi|402888109|ref|XP_003907419.1| PREDICTED: polyubiquitin-C isoform 9 [Papio anubis]
gi|402888111|ref|XP_003907420.1| PREDICTED: polyubiquitin-C isoform 10 [Papio anubis]
gi|441630368|ref|XP_004089541.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
gi|441630371|ref|XP_004089542.1| PREDICTED: polyubiquitin-C [Nomascus leucogenys]
Length = 457
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
>gi|164510214|emb|CAJ41447.1| polyubiquitin [Paralvinella grasslei]
Length = 304
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQRRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKKSTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKTKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFL 155
F+G +L+D R LS+Y I++ S + + L
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVL 299
>gi|149063232|gb|EDM13555.1| rCG21222, isoform CRA_a [Rattus norvegicus]
gi|149063234|gb|EDM13557.1| rCG21222, isoform CRA_a [Rattus norvegicus]
Length = 278
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|56754831|gb|AAW25598.1| unknown [Schistosoma japonicum]
Length = 381
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI IP Q +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIHDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|576773|gb|AAA82978.1| polyubiquitin [Cryptococcus neoformans var. grubii]
Length = 381
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|390176272|ref|XP_003736175.1| GA30006 [Drosophila pseudoobscura pseudoobscura]
gi|388858740|gb|EIM52248.1| GA30006 [Drosophila pseudoobscura pseudoobscura]
Length = 687
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>gi|357474763|ref|XP_003607667.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
gi|355508722|gb|AES89864.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
Length = 752
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 228 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 285
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 286 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 338
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 339 IFAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 384
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 385 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 440
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 456 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 513
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 514 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 566
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 567 IFAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 612
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 613 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 668
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 608 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 665
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 666 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 718
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 719 IFAGKQLEDG-RTLADYNIQKESTLHLVLR 747
>gi|226477454|emb|CAX72421.1| ubiquitin C [Schistosoma japonicum]
gi|226477456|emb|CAX72422.1| ubiquitin C [Schistosoma japonicum]
gi|226477458|emb|CAX72423.1| ubiquitin C [Schistosoma japonicum]
gi|226477460|emb|CAX72424.1| ubiquitin C [Schistosoma japonicum]
gi|226477462|emb|CAX72425.1| ubiquitin C [Schistosoma japonicum]
gi|226477464|emb|CAX72426.1| ubiquitin C [Schistosoma japonicum]
gi|226484015|emb|CAX79676.1| ubiquitin C [Schistosoma japonicum]
gi|226484017|emb|CAX79677.1| ubiquitin C [Schistosoma japonicum]
gi|226484019|emb|CAX79678.1| ubiquitin C [Schistosoma japonicum]
gi|226484021|emb|CAX79679.1| ubiquitin C [Schistosoma japonicum]
gi|226484023|emb|CAX79680.1| ubiquitin C [Schistosoma japonicum]
gi|226484027|emb|CAX79682.1| ubiquitin C [Schistosoma japonicum]
gi|226484029|emb|CAX79683.1| ubiquitin C [Schistosoma japonicum]
gi|226484031|emb|CAX79684.1| ubiquitin C [Schistosoma japonicum]
gi|226484033|emb|CAX79685.1| ubiquitin C [Schistosoma japonicum]
gi|226484035|emb|CAX79686.1| ubiquitin C [Schistosoma japonicum]
gi|226484037|emb|CAX79687.1| ubiquitin C [Schistosoma japonicum]
gi|226484039|emb|CAX79688.1| ubiquitin C [Schistosoma japonicum]
gi|226484041|emb|CAX79689.1| ubiquitin C [Schistosoma japonicum]
gi|226484043|emb|CAX79690.1| ubiquitin C [Schistosoma japonicum]
gi|226484045|emb|CAX79691.1| ubiquitin C [Schistosoma japonicum]
gi|226484049|emb|CAX79693.1| ubiquitin C [Schistosoma japonicum]
gi|226484051|emb|CAX79694.1| ubiquitin C [Schistosoma japonicum]
gi|226484053|emb|CAX79695.1| ubiquitin C [Schistosoma japonicum]
gi|226484081|emb|CAX79709.1| ubiquitin C [Schistosoma japonicum]
gi|443725027|gb|ELU12769.1| hypothetical protein CAPTEDRAFT_192594 [Capitella teleta]
Length = 229
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|302918054|ref|XP_003052575.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733515|gb|EEU46862.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 305
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|30060222|gb|AAP13102.1| polyubiquitin, partial [Schistosoma japonicum]
Length = 340
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELR 200
LE++ S T+ ++
Sbjct: 318 TLEVEPSDTIENVK 331
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
L + I +K + ++V+ +DT+ ++K KI +G
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG 339
>gi|145046250|ref|NP_001013290.2| ubiquitin [Danio rerio]
Length = 610
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|444434921|dbj|BAM77035.1| ubiquitin C [Homo sapiens]
Length = 685
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P +
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRS 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|320163196|gb|EFW40095.1| polyubiquitin 5 [Capsaspora owczarzaki ATCC 30864]
Length = 228
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|111218908|gb|ABH08755.1| ubiquitin [Arabidopsis thaliana]
Length = 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 1 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 58
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 59 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 111
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 112 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 157
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 158 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 215
Query: 247 VSRGGY 252
RGG+
Sbjct: 216 RLRGGF 221
>gi|148237866|ref|NP_001079589.1| Polyubiquitin-C-like [Xenopus laevis]
gi|27924422|gb|AAH45004.1| MGC53081 protein [Xenopus laevis]
gi|226469790|emb|CAX76725.1| ubiquitin C [Schistosoma japonicum]
gi|226473054|emb|CAX71213.1| ubiquitin C [Schistosoma japonicum]
Length = 380
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|29612653|gb|AAH49473.1| Zgc:172187 protein [Danio rerio]
Length = 480
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 259 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 316
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 317 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 369
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 370 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 415
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 416 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 471
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 32 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 88
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 89 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 142
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 143 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 188
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 189 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 243
>gi|330790588|ref|XP_003283378.1| ubiquitin [Dictyostelium purpureum]
gi|325086643|gb|EGC40029.1| ubiquitin [Dictyostelium purpureum]
gi|328867190|gb|EGG15573.1| ubiquitin [Dictyostelium fasciculatum]
Length = 381
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|1304128|dbj|BAA09860.1| polyubiquitin [Homo sapiens]
Length = 611
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE + S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEGEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>gi|24657014|ref|NP_728908.1| Ubiquitin-63E, isoform A [Drosophila melanogaster]
gi|24657019|ref|NP_523909.2| Ubiquitin-63E, isoform B [Drosophila melanogaster]
gi|45552935|ref|NP_995994.1| Ubiquitin-63E, isoform C [Drosophila melanogaster]
gi|442630045|ref|NP_001261383.1| Ubiquitin-63E, isoform D [Drosophila melanogaster]
gi|302595965|sp|P0CG69.1|UBIQP_DROME RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|23092947|gb|AAF47806.3| Ubiquitin-63E, isoform A [Drosophila melanogaster]
gi|23092948|gb|AAG22241.2| Ubiquitin-63E, isoform B [Drosophila melanogaster]
gi|45445791|gb|AAS64964.1| Ubiquitin-63E, isoform C [Drosophila melanogaster]
gi|440215267|gb|AGB94078.1| Ubiquitin-63E, isoform D [Drosophila melanogaster]
Length = 763
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 756
>gi|49586|emb|CAA30815.1| unnamed protein product [Cricetulus sp.]
Length = 223
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|389608337|dbj|BAM17780.1| ubiquitin [Papilio xuthus]
Length = 306
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|344232965|gb|EGV64838.1| ubiquitin [Candida tenuis ATCC 10573]
Length = 229
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|320031616|gb|EFW13576.1| ubiquitin [Coccidioides posadasii str. Silveira]
Length = 625
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 24/241 (9%)
Query: 3 IIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVK 62
++ G LEV + + +K KI+ IP Q L +G +L DG + DY I K
Sbjct: 324 LVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 383
Query: 63 EGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPI 121
E T L + I +K + ++V+ +DT+ ++K KI +G P
Sbjct: 384 EST---------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPP 434
Query: 122 KRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLL 181
+ L F+G +L+D R LS+Y I++ S + + L RL +Q L
Sbjct: 435 DQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTL 480
Query: 182 NGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILY 241
G +I LE++ S T++ ++ + + +P + I + + D +L + ++ L+
Sbjct: 481 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 540
Query: 242 V 242
+
Sbjct: 541 L 541
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 481 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 538
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 539 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 591
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 592 IFAGKQLEDG-RTLSDYNIQKESTLHLVLR 620
>gi|296478548|tpg|DAA20663.1| TPA: ubiquitin C [Bos taurus]
Length = 314
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|226477450|emb|CAX72419.1| polyubiquitin [Schistosoma japonicum]
Length = 245
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|225465625|ref|XP_002267452.1| PREDICTED: polyubiquitin 4-like isoform 1 [Vitis vinifera]
gi|359488113|ref|XP_003633702.1| PREDICTED: polyubiquitin 4-like isoform 2 [Vitis vinifera]
Length = 386
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|21429768|gb|AAM50562.1| AT20865p [Drosophila melanogaster]
Length = 1067
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 849
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 850 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 905
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 921 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 978
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 979 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 1031
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 1032 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 1060
>gi|384246185|gb|EIE19676.1| polyubiquitin [Coccomyxa subellipsoidea C-169]
Length = 305
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|226477448|emb|CAX72418.1| ubiquitin C [Schistosoma japonicum]
gi|226484005|emb|CAX79671.1| ubiquitin C [Schistosoma japonicum]
Length = 381
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|449479809|ref|XP_004177054.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Taeniopygia
guttata]
Length = 534
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 314 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 371
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 372 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 424
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 425 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 470
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 471 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 526
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 23/239 (9%)
Query: 5 IVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEG 64
+ G LEV L + + +K KI+ IP S+ L +G +L DG DY I K
Sbjct: 234 LCMTGKTITLEVELSDTIENVKAKIQDKEGIPPDSRXLIFAGKQLEDGRTFSDYNIQK-- 291
Query: 65 TKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKR 123
+ S + I +K + ++V+ +DT+ ++K KI +G P +
Sbjct: 292 ------VAVAETSVCLSGQQWQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ 345
Query: 124 MLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNG 183
L F+G +L+D R LS+Y I++ S + + L RL +Q L G
Sbjct: 346 QRLIFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTG 391
Query: 184 ASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+I LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 392 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 450
>gi|240255754|ref|NP_849299.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|240255758|ref|NP_849301.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|297809731|ref|XP_002872749.1| hexameric polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|449454712|ref|XP_004145098.1| PREDICTED: polyubiquitin 10-like [Cucumis sativus]
gi|449471945|ref|XP_004153450.1| PREDICTED: polyubiquitin 10-like [Cucumis sativus]
gi|302595948|sp|P0CG85.1|UBI1P_NICSY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302596003|sp|Q8H159.2|UBQ10_ARATH RecName: Full=Polyubiquitin 10; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|170352|gb|AAA34123.1| hexameric polyubiquitin [Nicotiana sylvestris]
gi|870792|gb|AAA68878.1| polyubiquitin [Arabidopsis thaliana]
gi|4115333|gb|AAD03341.1| ubiquitin [Pisum sativum]
gi|4115335|gb|AAD03342.1| ubiquitin [Pisum sativum]
gi|22655101|gb|AAM98141.1| polyubiquitin UBQ10 [Arabidopsis thaliana]
gi|118481031|gb|ABK92469.1| unknown [Populus trichocarpa]
gi|147805226|emb|CAN64480.1| hypothetical protein VITISV_002813 [Vitis vinifera]
gi|241740189|gb|ACS68204.1| ubiquitin 10.1 [Brassica napus]
gi|297318586|gb|EFH49008.1| hexameric polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|312282619|dbj|BAJ34175.1| unnamed protein product [Thellungiella halophila]
gi|332657100|gb|AEE82500.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|332657102|gb|AEE82502.1| polyubiquitin 10 [Arabidopsis thaliana]
Length = 457
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 451
Query: 247 VSRGGY 252
RGG+
Sbjct: 452 RLRGGF 457
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|197129051|gb|ACH45549.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
Length = 305
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGISPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIRE 147
F+G +L+D R LS+Y I++
Sbjct: 272 IFAGKQLED-GRTLSDYNIQK 291
>gi|5912028|emb|CAB55973.1| hypothetical protein [Homo sapiens]
Length = 239
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 19 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 76
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 77 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 129
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 130 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 175
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 176 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 231
>gi|168028716|ref|XP_001766873.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681852|gb|EDQ68275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 27/245 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYSIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLADYSIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV---F 243
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 301
Query: 244 KGTVS 248
+G +S
Sbjct: 302 RGGIS 306
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYSIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYSIQKESTLHL 221
>gi|2760349|gb|AAB95252.1| ubiquitin [Arabidopsis thaliana]
Length = 380
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQWL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYDIQKESTLHLVLR 376
>gi|281208308|gb|EFA82486.1| ubiquitin [Polysphondylium pallidum PN500]
Length = 443
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 223 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 280
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 281 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRL 333
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 334 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 379
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 380 TLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 435
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 115/289 (39%), Gaps = 68/289 (23%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKE---- 63
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE
Sbjct: 9 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 64 -----------------GTKIDL-----TINPFLQ---------------SSFN--QHDK 84
G I L I P Q S +N +
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 128
Query: 85 IHIIIK-----------FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIEL 133
+H++++ + ++V+ +DT+ ++K KI +G P + L F+G +L
Sbjct: 129 LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL 188
Query: 134 DDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDS 193
+D R LS+Y I++ S + + L RL +Q L G +I LE++ S
Sbjct: 189 ED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVEGS 234
Query: 194 STVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 235 DTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 283
>gi|47682711|gb|AAH69831.1| Zgc:172187 protein [Danio rerio]
gi|62530956|gb|AAH93444.1| Zgc:172187 protein [Danio rerio]
Length = 624
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 23 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 80
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 81 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 133
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 134 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 179
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 180 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 235
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 251 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 308
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 309 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 361
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 362 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 407
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 408 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 463
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 479 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 536
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 537 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 589
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 590 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 618
>gi|302595954|sp|P0CG84.1|UBI4P_NICSY RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|170354|gb|AAA34124.1| pentameric polyubiquitin, partial [Nicotiana sylvestris]
Length = 377
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 5 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 62
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 63 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 115
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 116 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 161
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 162 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 217
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 233 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 290
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 291 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 343
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 344 IFAGKQLED-GRTLADYNIQKESTLHLVLR 372
>gi|16071|emb|CAA48140.1| ubiquitin [Antirrhinum majus]
Length = 296
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 1 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST--- 57
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 58 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 111
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 112 FAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 157
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 158 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 212
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 152 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 209
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 210 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 262
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 263 IFAGKQLED-GRTLADYNIQKESTLHLVLR 291
>gi|302595808|sp|P0CH27.1|RL402_TRYCR RecName: Full=Ubiquitin-60S ribosomal protein L40; Contains:
RecName: Full=Ubiquitin; Contains: RecName: Full=60S
ribosomal protein L40; Flags: Precursor
gi|162337|gb|AAA30271.1| ubiquitin precursor [Trypanosoma cruzi]
Length = 356
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 ALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|226763|prf||1604470A poly-ubiquitin
Length = 272
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 52 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 109
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 110 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 162
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 163 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 208
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 209 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 264
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 2 GIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGGMQIFVKTLT 52
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S +
Sbjct: 53 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLH 111
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRE 212
+ L RL +Q L G +I LE++ S T++ ++ + + +P +
Sbjct: 112 LVL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 158
Query: 213 DYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 159 QQRLIFAGKQLEDGRTLADYNIQKESTLHL 188
>gi|225711930|gb|ACO11811.1| Ubiquitin [Lepeophtheirus salmonis]
Length = 229
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE---- 64
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
P L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 65 -----PTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+ R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLEG-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|21592581|gb|AAM64530.1| ubiquitin homolog [Arabidopsis thaliana]
Length = 229
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLXLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|27734375|gb|AAM51216.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 255
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 20/236 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T +
Sbjct: 2 TGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-L 60
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 61 HLVLR------LRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRL 114
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR + Q L G +I
Sbjct: 115 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGSGM-------QIFVKTLTGKTI 162
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 163 TLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 218
>gi|68160568|gb|AAY86773.1| polyubiquitin [Noccaea caerulescens]
Length = 382
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|23397122|gb|AAN31845.1| putative polyubiquitin (UBQ10) [Arabidopsis thaliana]
Length = 464
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILP 210
LE++ S T++ ++ + + +P
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIP 417
>gi|395517134|ref|XP_003762737.1| PREDICTED: polyubiquitin-B-like [Sarcophilus harrisii]
Length = 305
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQXXXIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQXXXIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|38114661|gb|AAH08955.2| UBC protein, partial [Homo sapiens]
Length = 546
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 22 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 79
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 80 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 132
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 133 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 178
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 179 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 234
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 250 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 307
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 308 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 360
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 361 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 406
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 407 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 462
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 402 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 459
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 460 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 512
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 513 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 541
>gi|297809725|ref|XP_002872746.1| hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp.
lyrata]
gi|297809771|ref|XP_002872769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318583|gb|EFH49005.1| hypothetical protein ARALYDRAFT_911794 [Arabidopsis lyrata subsp.
lyrata]
gi|297318606|gb|EFH49028.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|242062832|ref|XP_002452705.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
gi|241932536|gb|EES05681.1| hypothetical protein SORBIDRAFT_04g031060 [Sorghum bicolor]
Length = 459
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|118370588|ref|XP_001018495.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300262|gb|EAR98250.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 854
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 24/242 (9%)
Query: 2 RIIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIV 61
+I I G L+V + + +K KI+ IP Q L +G +L DG + DY I
Sbjct: 553 KIKITLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 612
Query: 62 KEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTP 120
KE T L + I +K + +DV+ +DT+ ++K KI +G P
Sbjct: 613 KEST---------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIP 663
Query: 121 IKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSL 180
+ L F+G +L+D R LS+Y I++ S + + L RL +Q
Sbjct: 664 PDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKT 709
Query: 181 LNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDIL 240
L G +I L+++ S T+ ++ + + +P + I + + D +L + ++ L
Sbjct: 710 LTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 769
Query: 241 YV 242
++
Sbjct: 770 HL 771
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 712 GKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 768
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 769 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 822
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 823 FAGKQLEDG-RTLSDYNIQKESTLHLVLR 850
>gi|356548680|ref|XP_003542728.1| PREDICTED: polyubiquitin-C-like isoform 1 [Glycine max]
gi|356548682|ref|XP_003542729.1| PREDICTED: polyubiquitin-C-like isoform 2 [Glycine max]
Length = 533
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLADYNIQKESTLHLVLR 528
>gi|342298462|emb|CBY46745.1| polyubiquitin 10 protein [Lepidium appelianum]
Length = 308
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 12 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 69
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 70 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 122
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 123 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 168
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 169 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 224
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 164 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 221
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 222 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 274
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 275 IFAGKQLED-GRTLADYNIQKESTLHLVLR 303
>gi|3603456|gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 45 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 102
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 103 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 155
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 156 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 201
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 202 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 259
Query: 247 VSRGGY 252
RGG+
Sbjct: 260 RLRGGF 265
>gi|33323472|gb|AAQ07453.1| ubiquitin [Musa acuminata AAA Group]
Length = 381
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLKVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|328867151|gb|EGG15534.1| ubiquitin [Dictyostelium fasciculatum]
Length = 380
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 25/244 (10%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 1 MQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T L + I +K + ++V+ +DT+ ++K KI +G
Sbjct: 61 IQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEG 111
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSS 178
P + L F+G +L+D R LS+Y I++ S + + L RL +Q
Sbjct: 112 IPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFV 157
Query: 179 SLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGD 238
L G +I LE++ S T+ ++ + + +P + I + + D +L + ++
Sbjct: 158 KTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217
Query: 239 ILYV 242
L++
Sbjct: 218 TLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 153 MQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T L + I +K + ++V+ +DT+ ++K KI +G
Sbjct: 213 IQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQDKEG 263
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
P + L F+G +L+D R LS+Y I++ S + + L+
Sbjct: 264 IPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|256079430|ref|XP_002575990.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Length = 349
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 53 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 110
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 111 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 163
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 164 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 209
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 210 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 265
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 205 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 262
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 263 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 315
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 316 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 344
>gi|224286458|gb|ACN40936.1| unknown [Picea sitchensis]
Length = 458
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|302595949|sp|P0CH04.1|UBI1P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595950|sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|288112|emb|CAA45621.1| polyubiquitin [Petroselinum crispum]
gi|288114|emb|CAA45622.1| polyubiquitin [Petroselinum crispum]
Length = 458
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|326495764|dbj|BAJ85978.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509329|dbj|BAJ91581.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|255081913|ref|XP_002508175.1| ubiquitin [Micromonas sp. RCC299]
gi|303285332|ref|XP_003061956.1| ubiquitin [Micromonas pusilla CCMP1545]
gi|226456367|gb|EEH53668.1| ubiquitin [Micromonas pusilla CCMP1545]
gi|226523451|gb|ACO69433.1| ubiquitin [Micromonas sp. RCC299]
Length = 381
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|602076|emb|CAA54603.1| pentameric polyubiquitin [Nicotiana tabacum]
Length = 346
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELRHLLLSSKILPR 211
LE++ S T++ ++ + + +PR
Sbjct: 318 TLEVESSDTIDNVKAKIQDKEGIPR 342
>gi|357512381|ref|XP_003626479.1| Ubiquitin-like protein [Medicago truncatula]
gi|355501494|gb|AES82697.1| Ubiquitin-like protein [Medicago truncatula]
Length = 277
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 57 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 114
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 115 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 167
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 168 IFAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 213
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 214 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 271
Query: 247 VSRGGY 252
RGG+
Sbjct: 272 RLRGGF 277
>gi|331236894|ref|XP_003331105.1| polyubiquitin-A [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|309310095|gb|EFP86686.1| polyubiquitin-A [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 609
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLADYNIQKESTLHLVLR 604
>gi|187729698|gb|ACD31680.1| ubiquitin [Gossypium hirsutum]
Length = 305
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L +Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLPDYNIQKESTLHLVLR 300
>gi|281205784|gb|EFA79973.1| ubiquitin [Polysphondylium pallidum PN500]
Length = 306
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + + +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQVFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + + +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQVFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|1332579|emb|CAA66667.1| polyubiquitin [Pinus sylvestris]
Length = 761
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 677
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K ++ ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTAKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLADYNIQKESTLHLVLR 756
>gi|18824|emb|CAA40324.1| hexaubiquitin protein [Helianthus annuus]
gi|1204096|emb|CAA40325.1| hexaubiquitin protein [Helianthus annuus]
Length = 457
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|355754493|gb|AET06143.1| ubiquitin [Papaver somniferum]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|356537527|ref|XP_003537278.1| PREDICTED: polyubiquitin 3-like [Glycine max]
Length = 306
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|326511535|dbj|BAJ91912.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522901|dbj|BAJ88496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 457
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|326501424|dbj|BAK02501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 457
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K +I+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAEIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 424 IFAGKQLED-GRTLADYNIQKESTLHLVLR 452
>gi|307006571|gb|ADN23570.1| ubiquitin [Hyalomma marginatum rufipes]
Length = 275
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 55 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 112
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 113 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 165
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 166 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 211
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 212 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLPDYNIQKESTLHL 267
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 5 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQIFVKTLT 55
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S +
Sbjct: 56 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLH 114
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRE 212
+ L RL +Q L G +I LE++ S T+ ++ + + +P +
Sbjct: 115 LVL-------------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 161
Query: 213 DYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 162 QQRLIFAGKQLEDGRTLSDYNIQKESTLHL 191
>gi|302843878|ref|XP_002953480.1| polyubiquitin [Volvox carteri f. nagariensis]
gi|300261239|gb|EFJ45453.1| polyubiquitin [Volvox carteri f. nagariensis]
Length = 305
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|30523391|gb|AAP31578.1| ubiquitin [Hevea brasiliensis]
Length = 230
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|28804499|dbj|BAC57955.1| polyubiquitin [Aster tripolium]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|242055399|ref|XP_002456845.1| hypothetical protein SORBIDRAFT_03g043940 [Sorghum bicolor]
gi|242064116|ref|XP_002453347.1| hypothetical protein SORBIDRAFT_04g004280 [Sorghum bicolor]
gi|357148716|ref|XP_003574869.1| PREDICTED: polyubiquitin-like isoform 1 [Brachypodium distachyon]
gi|357148721|ref|XP_003574870.1| PREDICTED: polyubiquitin-like isoform 2 [Brachypodium distachyon]
gi|357148724|ref|XP_003574871.1| PREDICTED: polyubiquitin-like isoform 3 [Brachypodium distachyon]
gi|302393780|sp|P69309.2|UBIQP_AVEFA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|320608|pir||S28426 polyubiquitin 4 - wild oat
gi|15989|emb|CAA49200.1| tetraubiquitin [Avena fatua]
gi|777758|gb|AAC37466.1| polyubiquitin [Saccharum hybrid cultivar H65-7052]
gi|25044841|gb|AAM28291.1| tetrameric ubiquitin [Ananas comosus]
gi|241928820|gb|EES01965.1| hypothetical protein SORBIDRAFT_03g043940 [Sorghum bicolor]
gi|241933178|gb|EES06323.1| hypothetical protein SORBIDRAFT_04g004280 [Sorghum bicolor]
gi|332379896|gb|AEE65379.1| ubiquitin 1 [Panicum virgatum]
gi|451854822|gb|EMD68114.1| hypothetical protein COCSADRAFT_108224 [Cochliobolus sativus
ND90Pr]
gi|452000986|gb|EMD93446.1| hypothetical protein COCHEDRAFT_1202381 [Cochliobolus
heterostrophus C5]
Length = 305
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|2760347|gb|AAB95251.1| ubiquitin [Arabidopsis thaliana]
Length = 456
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|413926507|gb|AFW66439.1| putative ubiquitin family protein [Zea mays]
Length = 297
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|388507280|gb|AFK41706.1| unknown [Medicago truncatula]
Length = 233
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|225465615|ref|XP_002267017.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
Length = 538
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 318 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I K+ T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKDST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K +RK ++V+ +DT ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTRKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L+ Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLAHYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L +Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLVDYNIQKESTLHLVLR 528
>gi|226502871|ref|NP_001148453.1| LOC100282068 [Zea mays]
gi|224059606|ref|XP_002299930.1| predicted protein [Populus trichocarpa]
gi|357474771|ref|XP_003607671.1| Ubiquitin [Medicago truncatula]
gi|902586|gb|AAC49014.1| ubiquitin [Zea mays]
gi|195619382|gb|ACG31521.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
gi|222847188|gb|EEE84735.1| predicted protein [Populus trichocarpa]
gi|238013752|gb|ACR37911.1| unknown [Zea mays]
gi|355508726|gb|AES89868.1| Ubiquitin [Medicago truncatula]
gi|413926508|gb|AFW66440.1| putative ubiquitin family protein isoform 1 [Zea mays]
gi|413926509|gb|AFW66441.1| putative ubiquitin family protein isoform 2 [Zea mays]
Length = 381
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|357474769|ref|XP_003607670.1| Ubiquitin [Medicago truncatula]
gi|355508725|gb|AES89867.1| Ubiquitin [Medicago truncatula]
Length = 533
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLADYNIQKESTLHLVLR 528
>gi|225465609|ref|XP_002266370.1| PREDICTED: polyubiquitin 4-like [Vitis vinifera]
Length = 383
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|297840967|ref|XP_002888365.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
gi|297334206|gb|EFH64624.1| polyubiquitin [Arabidopsis lyrata subsp. lyrata]
Length = 458
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LE+ + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEIESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 424 IFAGKQLED-GRTLADYNIQKESTLHLVLR 452
>gi|297812245|ref|XP_002874006.1| hypothetical protein ARALYDRAFT_488966 [Arabidopsis lyrata subsp.
lyrata]
gi|297319843|gb|EFH50265.1| hypothetical protein ARALYDRAFT_488966 [Arabidopsis lyrata subsp.
lyrata]
Length = 382
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|147834511|emb|CAN71997.1| hypothetical protein VITISV_004025 [Vitis vinifera]
Length = 538
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 318 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 373
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I K+ T
Sbjct: 9 TGKTITLKVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKDST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K +RK ++V+ +DT ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTRKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L +Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLVDYNIQKESTLHLILR 528
>gi|395295|emb|CAA52290.1| polyubiquitin [Volvox carteri f. nagariensis]
Length = 381
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|297724233|ref|NP_001174480.1| Os05g0504766 [Oryza sativa Japonica Group]
gi|242096828|ref|XP_002438904.1| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
gi|4809266|gb|AAD30173.1|AF148448_1 polyubiquitin [Sporobolus stapfianus]
gi|57863866|gb|AAW56906.1| polyubiquitin [Oryza sativa Japonica Group]
gi|125552905|gb|EAY98614.1| hypothetical protein OsI_20535 [Oryza sativa Indica Group]
gi|222632152|gb|EEE64284.1| hypothetical protein OsJ_19121 [Oryza sativa Japonica Group]
gi|241917127|gb|EER90271.1| hypothetical protein SORBIDRAFT_10g028020 [Sorghum bicolor]
gi|255676474|dbj|BAH93208.1| Os05g0504766 [Oryza sativa Japonica Group]
gi|326510917|dbj|BAJ91806.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521968|dbj|BAK04112.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|383843954|gb|AFH53939.1| polyubiquitin 4 [Brachypodium distachyon]
gi|383843956|gb|AFH53940.1| polyubiquitin 10 [Brachypodium distachyon]
Length = 381
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|302393782|sp|P23324.2|UBIQP_EUPEU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|159038|gb|AAA62225.1| ubiquitin [Euplotes eurystomus]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+++DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|18420267|ref|NP_568397.1| polyubiquitin 4 [Arabidopsis thaliana]
gi|297826781|ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp.
lyrata]
gi|302595977|sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|17678|emb|CAA31331.1| unnamed protein product [Arabidopsis thaliana]
gi|987519|gb|AAB53929.1| polyubiquitin [Arabidopsis thaliana]
gi|297327112|gb|EFH57532.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp.
lyrata]
gi|332005484|gb|AED92867.1| polyubiquitin 4 [Arabidopsis thaliana]
gi|226499|prf||1515347A poly-ubiquitin
Length = 382
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|374412404|gb|AEZ49160.1| polyubiquitin, partial [Wolffia australiana]
Length = 281
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 29 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 86
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 87 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 139
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 140 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 185
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 186 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 241
>gi|357513725|ref|XP_003627151.1| Ubiquitin [Medicago truncatula]
gi|327492449|dbj|BAK18565.1| polyubiquitin [Mesembryanthemum crystallinum]
gi|355521173|gb|AET01627.1| Ubiquitin [Medicago truncatula]
Length = 533
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLADYNIQKESTLHLVLR 528
>gi|302143601|emb|CBI22354.3| unnamed protein product [Vitis vinifera]
Length = 771
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 50 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 107
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 108 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 160
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 161 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 206
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 207 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 262
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 418 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 475
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 476 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 528
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 529 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 574
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 575 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 630
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 202 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 259
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 260 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 312
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPI 167
F+G +L+D R L++Y I++ S + + L RLR P+
Sbjct: 313 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGDPM 348
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 570 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 627
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 628 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 680
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 681 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 726
Query: 187 PLEMQ 191
LE +
Sbjct: 727 TLEQR 731
>gi|151935411|gb|ABS18744.1| ubiqutin ligase-like protein [Oryza sativa Japonica Group]
gi|326518380|dbj|BAJ88219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|224116110|ref|XP_002317213.1| predicted protein [Populus trichocarpa]
gi|118487986|gb|ABK95814.1| unknown [Populus trichocarpa]
gi|222860278|gb|EEE97825.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|28436479|gb|AAO43306.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 29 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 86
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 87 -------LHLVLRLRGGMQIFLKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 139
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 140 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 185
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S+T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 186 TLEVESSNTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 241
>gi|30679945|ref|NP_851029.1| polyubiquitin 3 [Arabidopsis thaliana]
gi|30679951|ref|NP_568112.2| polyubiquitin 3 [Arabidopsis thaliana]
gi|79326803|ref|NP_001031824.1| polyubiquitin 3 [Arabidopsis thaliana]
gi|122237441|sp|Q1EC66.1|UBQ3_ARATH RecName: Full=Polyubiquitin 3; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|7413601|emb|CAB86091.1| polyubiquitin (ubq3) [Arabidopsis thaliana]
gi|9757775|dbj|BAB08384.1| polyubiquitin [Arabidopsis thaliana]
gi|27311629|gb|AAO00780.1| polyubiquitin (UBQ3) [Arabidopsis thaliana]
gi|108385299|gb|ABF85770.1| At5g03240 [Arabidopsis thaliana]
gi|222423646|dbj|BAH19791.1| AT5G03240 [Arabidopsis thaliana]
gi|332003191|gb|AED90574.1| polyubiquitin 3 [Arabidopsis thaliana]
gi|332003192|gb|AED90575.1| polyubiquitin 3 [Arabidopsis thaliana]
gi|332003193|gb|AED90576.1| polyubiquitin 3 [Arabidopsis thaliana]
Length = 306
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|162461367|ref|NP_001105376.1| polyubiquitin [Zea mays]
gi|899608|gb|AAC49025.1| polyubiquitin [Zea mays]
Length = 381
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVVRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|53850089|emb|CAH59739.1| polyubiquitin [Plantago major]
Length = 232
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|53850091|emb|CAH59740.1| polyubiquitin [Plantago major]
Length = 305
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|402898876|ref|XP_003919464.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-B [Papio anubis]
Length = 305
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRXCMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|357123434|ref|XP_003563415.1| PREDICTED: polyubiquitin-A-like [Brachypodium distachyon]
Length = 609
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLADYNIQKESTLHLVLR 604
>gi|325181623|emb|CCA16073.1| polyubiquitin putative [Albugo laibachii Nc14]
Length = 538
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLADYNIQKESTLHLVLR 528
>gi|226477452|emb|CAX72420.1| polyubiquitin [Schistosoma japonicum]
Length = 268
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLGDGRTLSDYNIQKESTLHL 221
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLGDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTP 120
L + I +K + ++V+ +DT+ ++K KI +G P
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 265
>gi|225465623|ref|XP_002267206.1| PREDICTED: polyubiquitin-C-like [Vitis vinifera]
Length = 538
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLADYNIQKESTLHLVLR 528
>gi|164521185|gb|ABY60454.1| putative polyubiquitin [Adonis aestivalis var. palaestina]
Length = 281
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 20 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 77
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 78 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 130
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 131 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 176
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 177 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 232
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 172 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 229
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTP 120
L + I +K + ++V+ +DT+ ++K KI +G P
Sbjct: 230 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 276
>gi|16660459|gb|AAL27563.1|AF429429_1 polyubiquitin OUB1 [Olea europaea]
Length = 305
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|356548015|ref|XP_003542399.1| PREDICTED: polyubiquitin-A-like [Glycine max]
Length = 614
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 318 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 375
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 376 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 428
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 429 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 474
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 475 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 530
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 246 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST------ 299
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 300 ---LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 356
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R L++Y I++ S + + L RL +Q L G +I LE+
Sbjct: 357 KQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEV 402
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 403 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 454
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 470 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 527
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 528 -------LHLVLRLRGGMQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRL 580
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 581 IFAGKQLED-GRTLADYNIQKESTLHLVLR 609
>gi|356519611|ref|XP_003528465.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Glycine max]
Length = 776
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 31/245 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ + +K K+ +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESXN----VKAKVQDKEGIPPDQQRL 571
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L D R L++Y I + S + + L RL +Q L G +I
Sbjct: 572 IFAGKQLQD-GRTLADYNILKXSTLHLVL-------------RLCGGMQIFVKTLIGKTI 617
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + + + V +
Sbjct: 618 TLEVESSDTIDNVKAKIQDKESIPPDQQRLIFAGKQLEDGLTLADYNIXESTLHLVLR-- 675
Query: 247 VSRGG 251
RGG
Sbjct: 676 -LRGG 679
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ +IP Q L +G +L DGL + DY I + +
Sbjct: 614 GKTITLEVESSDTIDNVKAKIQDKESIPPDQQRLIFAGKQLEDGLTLADYNIXESTLHLV 673
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + +Q I +K + ++V+ +DT+ ++K K +G + L
Sbjct: 674 LRLRGGMQ----------IFVKTLIGKSVTLEVESSDTIDNVKAKFQDKEGILPDQRRLI 723
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++ I + S + + L+
Sbjct: 724 FAGKQLED-GRTLADXNILKESTLHLVLR 751
>gi|248337|gb|AAB21993.1| polyubiquitin [Zea mays]
gi|248339|gb|AAB21994.1| polyubiquitin [Zea mays]
gi|33323474|gb|AAQ07454.1| ubiquitin [Musa acuminata]
gi|52076878|dbj|BAD45891.1| polyubiquitin [Oryza sativa Japonica Group]
gi|218198760|gb|EEC81187.1| hypothetical protein OsI_24193 [Oryza sativa Indica Group]
gi|222636097|gb|EEE66229.1| hypothetical protein OsJ_22384 [Oryza sativa Japonica Group]
gi|413926516|gb|AFW66448.1| ubiquitin2 [Zea mays]
gi|413935667|gb|AFW70218.1| clone MubG1 ubiquitin [Zea mays]
Length = 533
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLADYNIQKESTLHLVLR 528
>gi|443922596|gb|ELU42015.1| polyubiquitin [Rhizoctonia solani AG-1 IA]
Length = 681
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 461 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 518
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 519 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 571
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 572 IFAGKQLEDG-RTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 617
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 618 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 673
>gi|302393784|sp|P69315.2|UBIQP_LINUS RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related; Flags:
Precursor
gi|168304|gb|AAA33401.1| ubiquitin, partial [Linum usitatissimum]
Length = 305
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 50 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 107
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 108 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 160
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 161 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 206
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 207 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 262
>gi|155965254|gb|ABU40645.1| polyubiquitin [Triticum aestivum]
Length = 380
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|3126967|gb|AAC16012.1| polyubiquitin [Elaeagnus umbellata]
Length = 458
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ DT+ ++K +I +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESLDTIDNVKAQIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|12849189|dbj|BAB28242.1| unnamed protein product [Mus musculus]
Length = 305
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 26/237 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEI-IVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGAS 185
F+G +L+D R LS+Y I++ S + +VF RL +Q L G +
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVF--------------RLRGGMQIFVKTLTGKT 164
Query: 186 IPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 165 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|902584|gb|AAC49013.1| polyubiquitin containing 7 ubiquitin monomers [Zea mays]
Length = 533
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + + RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVV-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLADYNIQKESTLHLVLR 528
>gi|357513727|ref|XP_003627152.1| Ubiquitin [Medicago truncatula]
gi|355521174|gb|AET01628.1| Ubiquitin [Medicago truncatula]
Length = 270
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|225461088|ref|XP_002282119.1| PREDICTED: polyubiquitin-A-like [Vitis vinifera]
Length = 761
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 677
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLADYNIQKESTLHLVLR 756
>gi|124359683|gb|ABD32351.2| Ubiquitin [Medicago truncatula]
Length = 538
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 14 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 71
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 72 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 124
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 125 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 170
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 171 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 226
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 242 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 299
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 300 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRL 352
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 353 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 398
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 399 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 454
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 394 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 451
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 452 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 504
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 505 IFAGKQLED-GRTLADYNIQKESTLHLVLR 533
>gi|16660462|gb|AAL27564.1|AF429430_1 polyubiquitin OUB2 [Olea europaea]
Length = 457
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|357475981|ref|XP_003608276.1| Ubiquitin [Medicago truncatula]
gi|355509331|gb|AES90473.1| Ubiquitin [Medicago truncatula]
Length = 533
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLADYNIQKESTLHLVLR 528
>gi|240255756|ref|NP_849300.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|240255762|ref|NP_567291.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|240255764|ref|NP_001078353.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|224132654|ref|XP_002327848.1| predicted protein [Populus trichocarpa]
gi|449433926|ref|XP_004134747.1| PREDICTED: polyubiquitin-like isoform 1 [Cucumis sativus]
gi|449433928|ref|XP_004134748.1| PREDICTED: polyubiquitin-like isoform 2 [Cucumis sativus]
gi|302393785|sp|P69322.2|UBIQP_PEA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|20589|emb|CAA34886.1| unnamed protein product [Pisum sativum]
gi|4115339|gb|AAD03344.1| ubiquitin [Pisum sativum]
gi|15450661|gb|AAK96602.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
gi|49532982|dbj|BAD26592.1| polyubiquitin [Populus nigra]
gi|82409051|gb|ABB73307.1| ubiquitin [Lotus japonicus]
gi|118481117|gb|ABK92512.1| unknown [Populus trichocarpa]
gi|118482690|gb|ABK93264.1| unknown [Populus trichocarpa]
gi|118488167|gb|ABK95903.1| unknown [Populus trichocarpa]
gi|118488391|gb|ABK96012.1| unknown [Populus trichocarpa]
gi|118488630|gb|ABK96127.1| unknown [Populus trichocarpa]
gi|217874292|gb|ACK56276.1| ubiquitin [Populus trichocarpa]
gi|222837257|gb|EEE75636.1| predicted protein [Populus trichocarpa]
gi|332657101|gb|AEE82501.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|332657104|gb|AEE82504.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|332657105|gb|AEE82505.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|226707|prf||1603402A poly-ubiquitin
Length = 381
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|115444401|ref|NP_001045980.1| Os02g0161900 [Oryza sativa Japonica Group]
gi|115469558|ref|NP_001058378.1| Os06g0681400 [Oryza sativa Japonica Group]
gi|6013289|gb|AAF01315.1|AF184279_1 polyubiquitin [Oryza sativa Indica Group]
gi|6013291|gb|AAF01316.1|AF184280_1 polyubiquitin [Oryza sativa Indica Group]
gi|416038|emb|CAA53665.1| polyubiquitin [Oryza sativa Indica Group]
gi|1574944|gb|AAC49806.1| polyubiquitin [Oryza sativa Indica Group]
gi|49389251|dbj|BAD25213.1| polyubiquitin 6 [Oryza sativa Japonica Group]
gi|113535511|dbj|BAF07894.1| Os02g0161900 [Oryza sativa Japonica Group]
gi|113596418|dbj|BAF20292.1| Os06g0681400 [Oryza sativa Japonica Group]
gi|215715366|dbj|BAG95117.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218190115|gb|EEC72542.1| hypothetical protein OsI_05955 [Oryza sativa Indica Group]
gi|222622224|gb|EEE56356.1| hypothetical protein OsJ_05481 [Oryza sativa Japonica Group]
gi|284431760|gb|ADB84621.1| polyubiquitin [Oryza sativa Japonica Group]
gi|306415955|gb|ADM86852.1| polyubiquitin [Oryza sativa Japonica Group]
gi|326504784|dbj|BAK06683.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|332379898|gb|AEE65380.1| ubiquitin 2 [Panicum virgatum]
gi|413926517|gb|AFW66449.1| ubiquitin2 [Zea mays]
Length = 457
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|323303927|gb|EGA57707.1| Ubi4p [Saccharomyces cerevisiae FostersB]
Length = 248
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKXLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDS 193
LE++ S
Sbjct: 242 TLEVESS 248
>gi|145352566|ref|XP_001420612.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580847|gb|ABO98905.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 381
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|326517545|dbj|BAK03691.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 457
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|297841025|ref|XP_002888394.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
gi|297334235|gb|EFH64653.1| hexaubiquitin protein [Arabidopsis lyrata subsp. lyrata]
Length = 483
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|37595366|gb|AAQ94569.1| ubiquitin C [Danio rerio]
Length = 235
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKPLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|28394784|gb|AAO42469.1| putative polyubiquitin [Arabidopsis lyrata]
Length = 289
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 1 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST--- 57
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 58 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 111
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 112 FAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 157
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 158 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 212
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 152 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 209
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + K T T+ +I +G P + L
Sbjct: 210 -------LHLVLRLRGGMQIFVKTLTGK-------TITLEVESSEIQDKEGIPPDQQRLI 255
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 256 FAGKQLED-GRTLADYNIQKESTLHLVLR 283
>gi|413926513|gb|AFW66445.1| ubiquitin2 [Zea mays]
Length = 535
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 11 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 68
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 69 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 121
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 122 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 167
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 168 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 223
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 239 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 296
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 297 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 349
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 350 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 395
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 396 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 451
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 391 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 448
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 449 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 501
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 502 IFAGKQLED-GRTLADYNIQKESTLHLVLR 530
>gi|297810399|ref|XP_002873083.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
lyrata]
gi|297318920|gb|EFH49342.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|30679302|ref|NP_849292.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|186511482|ref|NP_001118922.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|240255760|ref|NP_974516.4| polyubiquitin 10 [Arabidopsis thaliana]
gi|224115232|ref|XP_002316978.1| predicted protein [Populus trichocarpa]
gi|297813891|ref|XP_002874829.1| hypothetical protein ARALYDRAFT_490155 [Arabidopsis lyrata subsp.
lyrata]
gi|356536051|ref|XP_003536554.1| PREDICTED: polyubiquitin-like isoform 1 [Glycine max]
gi|356536053|ref|XP_003536555.1| PREDICTED: polyubiquitin-like isoform 2 [Glycine max]
gi|356536055|ref|XP_003536556.1| PREDICTED: polyubiquitin-like isoform 3 [Glycine max]
gi|449458219|ref|XP_004146845.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
gi|449517130|ref|XP_004165599.1| PREDICTED: polyubiquitin-like [Cucumis sativus]
gi|302393787|sp|P69325.2|UBIQP_SOYBN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302596002|sp|Q3E7T8.2|UBQ14_ARATH RecName: Full=Polyubiquitin 14; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|1076708|pir||S49332 polyubiquitin 4 - common sunflower
gi|25294250|pir||G85036 polyubiquitin [imported] - Arabidopsis thaliana
gi|303901|dbj|BAA03764.1| ubiquitin [Glycine max]
gi|456714|dbj|BAA05670.1| ubiquitin [Glycine max]
gi|556688|emb|CAA84440.1| seed tetraubiquitin [Helianthus annuus]
gi|994785|dbj|BAA05085.1| Ubiquitin [Glycine max]
gi|4263514|gb|AAD15340.1| putative polyubiquitin [Arabidopsis thaliana]
gi|7269774|emb|CAB77774.1| polyubiquitin [Arabidopsis thaliana]
gi|21593346|gb|AAM65295.1| polyubiquitin (UBQ14) [Arabidopsis thaliana]
gi|53850087|emb|CAH59738.1| polyubiquitin [Plantago major]
gi|222423150|dbj|BAH19554.1| AT4G02890 [Arabidopsis thaliana]
gi|222860043|gb|EEE97590.1| predicted protein [Populus trichocarpa]
gi|297320666|gb|EFH51088.1| hypothetical protein ARALYDRAFT_490155 [Arabidopsis lyrata subsp.
lyrata]
gi|332656846|gb|AEE82246.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|332656847|gb|AEE82247.1| polyubiquitin 14 [Arabidopsis thaliana]
gi|332657103|gb|AEE82503.1| polyubiquitin 10 [Arabidopsis thaliana]
gi|399513942|gb|AFP43341.1| polyubiquitin [Arabidopsis thaliana]
gi|1096513|prf||2111434A tetraubiquitin
Length = 305
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|449662449|ref|XP_004205543.1| PREDICTED: polyubiquitin-B-like isoform 1 [Hydra magnipapillata]
gi|449665888|ref|XP_002158413.2| PREDICTED: polyubiquitin-like [Hydra magnipapillata]
Length = 380
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEAADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ + T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|1684855|gb|AAB36545.1| ubiquitin-like protein [Phaseolus vulgaris]
Length = 407
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 111 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 168
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 169 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 221
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 222 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 267
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 268 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 323
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 263 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 320
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 321 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 373
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 374 IFAGKQLED-GRTLADYNIQKESTLHLVLR 402
>gi|357123401|ref|XP_003563399.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-C-like [Brachypodium
distachyon]
Length = 535
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 22/236 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR + + V+T L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGG---QXMQIFVKT----LTGKTI 395
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L ++ S T++ ++ + + LP + I + + D +L + ++ L++
Sbjct: 396 TLXVESSDTIDNVKSKIQDKEGLPPDQQRLIFAGKQLEDGRTLADYNIQKXSTLHL 451
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L V + + +K KI+ +P Q L +G +L DG + DY I K T
Sbjct: 391 TGKTITLXVESSDTIDNVKSKIQDKEGLPPDQQRLIFAGKQLEDGRTLADYNIQKXST-- 448
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V +DT+ ++K KI +GTP + L
Sbjct: 449 -------LHLVLRLRGGMQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGTPPDQQQL 501
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 502 IFAGKQLED-GRTLADYNIQKESTLHLVLR 530
>gi|224160432|ref|XP_002338212.1| predicted protein [Populus trichocarpa]
gi|222871285|gb|EEF08416.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|328856761|gb|EGG05881.1| hypothetical protein MELLADRAFT_87680 [Melampsora larici-populina
98AG31]
Length = 535
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLADYNIQKESTLHLVLR 528
>gi|241740196|gb|ACS68205.1| ubiquitin 10.2 [Brassica napus]
Length = 381
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|18044723|gb|AAH19850.1| Ubiquitin B [Mus musculus]
Length = 305
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQHRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|116312012|emb|CAJ86369.1| OSIGBa0117N13.13 [Oryza sativa Indica Group]
gi|116312055|emb|CAJ86419.1| H0303G06.8 [Oryza sativa Indica Group]
gi|125549841|gb|EAY95663.1| hypothetical protein OsI_17529 [Oryza sativa Indica Group]
Length = 381
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|4115337|gb|AAD03343.1| ubiquitin [Pisum sativum]
Length = 457
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|28436481|gb|AAO43307.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 29 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 86
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 87 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 139
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 140 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 185
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 186 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 241
>gi|356565543|ref|XP_003550999.1| PREDICTED: polyubiquitin-C-like [Glycine max]
Length = 533
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDSIENVKAKIEEKEGIPPDQQRLIFAGKQLEDGRTLEDYEIQKESTLHL 449
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KIE+ IP Q L +G +L DG +EDY I KE T
Sbjct: 389 TGKTITLEVESSDSIENVKAKIEEKEGIPPDQQRLIFAGKQLEDGRTLEDYEIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKAKIQEKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+DE R L +Y I++ S + + L+
Sbjct: 500 IFAGKQLEDE-RTLEDYDIQKESTLHLVLR 528
>gi|164430972|gb|ABY55758.1| ubiquitin [Drosophila silvestris]
Length = 222
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 17 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 74
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 75 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 127
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 128 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 173
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T+ ++ + + +P + I + + D +L + ++
Sbjct: 174 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 222
>gi|290750644|gb|ADD52202.1| ubiquitin [Catharanthus roseus]
gi|341869050|gb|AEK98798.1| ubiquitin [Carthamus tinctorius]
Length = 381
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 318 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLILAGKQLEDGRTLADYNIQKESTLHLV--L 375
Query: 247 VSRGGY 252
RGG+
Sbjct: 376 RLRGGF 381
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K K + IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKTQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++ I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADCNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|118370596|ref|XP_001018499.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300266|gb|EAR98254.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 228
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L++ + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTVTLDVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDIEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|363992286|gb|AEW46688.1| polyubiquitin, partial [Ulva linza]
Length = 226
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|330797961|ref|XP_003287025.1| ubiquitin [Dictyostelium purpureum]
gi|325082988|gb|EGC36453.1| ubiquitin [Dictyostelium purpureum]
Length = 365
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-K 66
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 220
Query: 67 IDLTINPFLQ--------------------------------------SSFN--QHDKIH 86
+ L + +Q S +N + +H
Sbjct: 221 LVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEEDGRTLSDYNIQKESTLH 280
Query: 87 IIIKF-----------PSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDD 135
++++ + ++V+ +DT+ ++K KI +G P + L F+G +L+D
Sbjct: 281 LVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLED 340
Query: 136 EFRNLSEYGIREFSEIIVFLK 156
R LS+Y I++ S + + L+
Sbjct: 341 -GRTLSDYNIQKESTLHLVLR 360
>gi|145530714|ref|XP_001451129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418773|emb|CAK83732.1| unnamed protein product [Paramecium tetraurelia]
Length = 624
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 252 TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 309
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 310 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRL 362
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 363 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 408
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 409 TLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 464
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 1 MRIIIVA-NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + + G L+V + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 472 MQIFVKSLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 531
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T L + I +K + +DV+ +DT+ ++K KI +G
Sbjct: 532 IQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEG 582
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
P + L F+G +L+D R LS+Y I++ S + + L+
Sbjct: 583 IPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVLR 619
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 118/293 (40%), Gaps = 72/293 (24%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKE---- 63
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE
Sbjct: 34 TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 93
Query: 64 ------------GTKIDLTINPF--------------------------------LQSSF 79
G I L + P +++F
Sbjct: 94 LVLRLKRWNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFCRKVIRRWKNTF 153
Query: 80 N-QHDK-IHIIIKFPSRKFN--------IDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFS 129
QH K IH + F ++N +DV+ +DT+ ++K KI +G P + L F+
Sbjct: 154 RLQHLKGIHSPLSFEIERWNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFA 213
Query: 130 GIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLE 189
G +L+D R LS+Y I++ S + + L RL +Q L G +I L+
Sbjct: 214 GKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLD 259
Query: 190 MQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 260 VEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 312
>gi|18803|emb|CAA40323.1| polyubiquitin protein [Helianthus annuus]
Length = 334
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELR 200
LE++ S T++ ++
Sbjct: 318 TLEVESSDTIDNVK 331
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKI 113
L + I +K + ++V+ +DT+ ++K KI
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 334
>gi|375298520|dbj|BAL61087.1| polyubiquitin [Dianthus caryophyllus]
Length = 229
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|290987764|ref|XP_002676592.1| polyubiquitin [Naegleria gruberi]
gi|290995460|ref|XP_002680313.1| polyubiquitin [Naegleria gruberi]
gi|284090195|gb|EFC43848.1| polyubiquitin [Naegleria gruberi]
gi|284093933|gb|EFC47569.1| polyubiquitin [Naegleria gruberi]
Length = 305
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ + T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 162 GKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 218
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 219 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLI 272
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 273 FAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|290984061|ref|XP_002674746.1| polyubiquitin [Naegleria gruberi]
gi|284088338|gb|EFC42002.1| polyubiquitin [Naegleria gruberi]
Length = 229
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ + T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|302143596|emb|CBI22349.3| unnamed protein product [Vitis vinifera]
Length = 298
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 36 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 93
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 94 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 146
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 147 IFAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 192
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 193 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 248
>gi|192910770|gb|ACF06493.1| UBQ4 [Elaeis guineensis]
Length = 384
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L+ M + Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLRLMGGM-------------QIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|343485975|dbj|BAK61744.1| ubiquitin [Collozoum amoeboides]
Length = 228
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|302393779|sp|P42740.2|UBIQP_AGLNE RecName: Full=Polyubiquitin; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Flags: Precursor
gi|166336|gb|AAA72126.1| polyubiquitin [Aglaothamnion neglectum]
gi|445141|prf||1908440A poly-ubiquitin
Length = 457
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTITGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNLQKESTLHL 297
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY KE T
Sbjct: 9 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNNQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q + G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTITGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 424 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 452
>gi|413935668|gb|AFW70219.1| polyubiquitin-like protein [Zea mays]
Length = 502
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 43/268 (16%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEI----------IVFLKTMN------RLRDNPPIRRL 170
F+G +L+D R L++Y I++ S + +F+KT+ + + I +
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 330
Query: 171 SFKVQTSSSL----------------LNGASIPLEMQDSSTVNELRHLLLSSKILPREDY 214
K+Q S+L L G +I LE++ S T++ ++ + + +P +
Sbjct: 331 KAKIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 390
Query: 215 IFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 391 RLIFAGKQLEDGRTLADYNIQKESTLHL 418
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 358 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 415
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 416 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 468
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 469 IFAGKQLED-GRTLADYNIQKESTLHLVLR 497
>gi|297809843|ref|XP_002872805.1| hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp.
lyrata]
gi|297318642|gb|EFH49064.1| hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp.
lyrata]
Length = 309
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|168005217|ref|XP_001755307.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693435|gb|EDQ79787.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 305
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|168062150|ref|XP_001783045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665429|gb|EDQ52114.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|12851404|dbj|BAB29028.1| unnamed protein product [Mus musculus]
Length = 305
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLGVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 299
Query: 247 VSRGGY 252
RGGY
Sbjct: 300 RLRGGY 305
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI IP Q L +G +L DG + DY KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIRDKEGIPPDQQRLIFAGKQLEDGSTLSDYNNQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + + V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLGVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|403366242|gb|EJY82919.1| Ubiquitin [Oxytricha trifallax]
Length = 379
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 37/242 (15%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSS------SL 180
F+G +L+D R LS+Y R+ SF QT
Sbjct: 272 IFAGKQLED-GRTLSDYTSRKIYS--------------------SFGPQTQRWYAIFVKT 310
Query: 181 LNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDIL 240
L G +I L+++ S T+ ++ + + +P + I + + D +L + ++ L
Sbjct: 311 LTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 370
Query: 241 YV 242
++
Sbjct: 371 HL 372
>gi|395536358|ref|XP_003770187.1| PREDICTED: polyubiquitin-B [Sarcophilus harrisii]
Length = 305
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDXXXLSDYNIQKESTLHL 221
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDXXXLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|357137122|ref|XP_003570150.1| PREDICTED: polyubiquitin 11-like [Brachypodium distachyon]
Length = 241
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|2654141|gb|AAB87694.1| polyubiquitin [Amoeba proteus]
Length = 382
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPGDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ D++ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R+LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRSLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ +++ ++ + + +P + I + + D SL + ++ L++
Sbjct: 166 TLEVEPGDSIDNVKQKIQDKEGIPPDGQGLIFAGKQLEDGGSLSDYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I I G LEV + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 229 MQIFIKTLTGKTITLEVEPGDSIDNVKEKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYN 288
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T L + I +K + ++V+ D++ ++K+KI +G
Sbjct: 289 IQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVEPGDSIDNVKQKIQDKEG 339
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
P + L F+G +L+D R+LS+Y I++ S + + L+
Sbjct: 340 IPPDQQRLIFAGKQLED-GRSLSDYNIQKESTLHLVLR 376
>gi|302822663|ref|XP_002992988.1| hypothetical protein SELMODRAFT_187148 [Selaginella moellendorffii]
gi|302825886|ref|XP_002994514.1| hypothetical protein SELMODRAFT_138728 [Selaginella moellendorffii]
gi|300137505|gb|EFJ04422.1| hypothetical protein SELMODRAFT_138728 [Selaginella moellendorffii]
gi|300139188|gb|EFJ05934.1| hypothetical protein SELMODRAFT_187148 [Selaginella moellendorffii]
Length = 229
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|168016982|ref|XP_001761027.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687713|gb|EDQ74094.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 533
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLADYNIQKESTLHLVLR 528
>gi|357474765|ref|XP_003607668.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
gi|355508723|gb|AES89865.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula]
Length = 497
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 228 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 285
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 286 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 338
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 339 IFAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 384
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 385 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 440
>gi|302762631|ref|XP_002964737.1| hypothetical protein SELMODRAFT_270468 [Selaginella moellendorffii]
gi|300166970|gb|EFJ33575.1| hypothetical protein SELMODRAFT_270468 [Selaginella moellendorffii]
Length = 535
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLADYNIQKESTLHLVLR 528
>gi|302796783|ref|XP_002980153.1| hypothetical protein SELMODRAFT_271419 [Selaginella moellendorffii]
gi|302820321|ref|XP_002991828.1| hypothetical protein SELMODRAFT_162003 [Selaginella moellendorffii]
gi|300140366|gb|EFJ07090.1| hypothetical protein SELMODRAFT_162003 [Selaginella moellendorffii]
gi|300152380|gb|EFJ19023.1| hypothetical protein SELMODRAFT_271419 [Selaginella moellendorffii]
Length = 306
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|168043709|ref|XP_001774326.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674318|gb|EDQ60828.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 457
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>gi|118370604|ref|XP_001018503.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300270|gb|EAR98258.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 384
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L++ + + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLDLEVSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLDDGKILSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +D++ DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTVTLDLESCDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +LDD + +S+Y I + S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLDDS-KTISDYNISKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 318 TLDLEASDTIENVKSKIQDKEGIPPDQQRLIFSGKCLEDTRTLSDYNIQKEQTLHLV--L 375
Query: 247 VSRGGY 252
RGGY
Sbjct: 376 RLRGGY 381
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 26/199 (13%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
IK KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 26 IKAKIQDKEGIPPDQQRLIFAGKQLDDGKTLSDYNIQKEST---------LHLVLRLRGG 76
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + +D++ DT+ ++K KI +G P + L F+G +LDD + +S+Y
Sbjct: 77 MQIFVKTLTGKTVTLDLEPCDTIENVKAKIQDKEGIPPDQQRLIFAGKQLDDS-KTISDY 135
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I + S + + L RL +Q L G +I L+++ S T+ ++ +
Sbjct: 136 NISKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLDLEVSDTIENVKSKI 182
Query: 204 LSSKILP--REDYIFIHKQ 220
+ +P ++ IF KQ
Sbjct: 183 QDKEGIPPDQQRLIFAGKQ 201
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L++ + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 85 TGKTVTLDLEPCDTIENVKAKIQDKEGIPPDQQRLIFAGKQLDDSKTISDYNISKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +D++ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLDLEVSDTIENVKSKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +LDD + LS+Y I++ S + + L RL +Q L G ++
Sbjct: 196 IFAGKQLDD-GKILSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTV 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
L+++ T+ ++ + + +P ++ IF KQ
Sbjct: 242 TLDLESCDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 277
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 85 IHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K +RK + ++ +DT+ +K KI +G P + L F+G +LDD + LS+Y
Sbjct: 1 MQIFVKTLTRKTITLGLEVSDTIEGIKAKIQDKEGIPPDQQRLIFAGKQLDD-GKTLSDY 59
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G ++ L+++ T+ ++ +
Sbjct: 60 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTVTLDLEPCDTIENVKAKI 106
Query: 204 LSSKILP--REDYIFIHKQ 220
+ +P ++ IF KQ
Sbjct: 107 QDKEGIPPDQQRLIFAGKQ 125
>gi|302822499|ref|XP_002992907.1| hypothetical protein SELMODRAFT_162680 [Selaginella moellendorffii]
gi|302825882|ref|XP_002994512.1| hypothetical protein SELMODRAFT_163447 [Selaginella moellendorffii]
gi|300137503|gb|EFJ04420.1| hypothetical protein SELMODRAFT_163447 [Selaginella moellendorffii]
gi|300139252|gb|EFJ05996.1| hypothetical protein SELMODRAFT_162680 [Selaginella moellendorffii]
Length = 382
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|168005465|ref|XP_001755431.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693559|gb|EDQ79911.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|7267292|emb|CAB81074.1| polyubiquitin (ubq10) [Arabidopsis thaliana]
Length = 464
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPR 211
LE++ S T++ ++ + ++ R
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEVFLR 418
>gi|92790172|emb|CAI83755.1| Polyubiqutin 2 [Polyplastron multivesiculatum]
Length = 346
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 51 GKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 107
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 108 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLI 161
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 162 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 207
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 208 LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 262
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 203 GKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 259
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 260 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLI 313
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 314 FAGKQLEDN-RTLADYNIQKESTLHLVLR 341
>gi|356545971|ref|XP_003541406.1| PREDICTED: polyubiquitin-like [Glycine max]
Length = 269
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 48 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 105
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 106 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 158
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 159 IFAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 204
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 205 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 260
>gi|403338482|gb|EJY68482.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
Length = 228
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|302756493|ref|XP_002961670.1| hypothetical protein SELMODRAFT_227280 [Selaginella moellendorffii]
gi|300170329|gb|EFJ36930.1| hypothetical protein SELMODRAFT_227280 [Selaginella moellendorffii]
Length = 687
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 677
>gi|302789426|ref|XP_002976481.1| hypothetical protein SELMODRAFT_271198 [Selaginella moellendorffii]
gi|302803592|ref|XP_002983549.1| hypothetical protein SELMODRAFT_228943 [Selaginella moellendorffii]
gi|300148792|gb|EFJ15450.1| hypothetical protein SELMODRAFT_228943 [Selaginella moellendorffii]
gi|300155519|gb|EFJ22150.1| hypothetical protein SELMODRAFT_271198 [Selaginella moellendorffii]
Length = 381
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|424513675|emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
Length = 359
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 136 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 193
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 194 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 246
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 247 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 292
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 293 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 348
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 86 GIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGGMQIFVKTLT 136
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S +
Sbjct: 137 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLH 195
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRE 212
+ L RL +Q L G +I LE++ S T++ ++ + + +P +
Sbjct: 196 LVL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 242
Query: 213 DYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 243 QQRLIFAGKQLEDGRTLADYNIQKESTLHL 272
>gi|2760345|gb|AAB95250.1| ubiquitin [Arabidopsis thaliana]
Length = 304
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I+ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQRESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|302784142|ref|XP_002973843.1| hypothetical protein SELMODRAFT_173723 [Selaginella moellendorffii]
gi|300158175|gb|EFJ24798.1| hypothetical protein SELMODRAFT_173723 [Selaginella moellendorffii]
Length = 457
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 424 IFAGKQLED-GRTLADYNIQKESTLHLVLR 452
>gi|237842873|ref|XP_002370734.1| polyubiquitin, putative [Toxoplasma gondii ME49]
gi|211968398|gb|EEB03594.1| polyubiquitin, putative [Toxoplasma gondii ME49]
gi|221485709|gb|EEE23990.1| polyubiquitin, putative [Toxoplasma gondii GT1]
gi|221502923|gb|EEE28633.1| polyubiquitin, putative [Toxoplasma gondii VEG]
Length = 307
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|118370592|ref|XP_001018497.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300264|gb|EAR98252.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 384
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L + + + ++K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLNTEVSDSIQDVKAKIQDKEGIPPDQQRLIFAGKQLDDGRSLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +D++ DTV ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTVTLDLEPCDTVENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +LDD R LS+Y I++ S + + L RL +Q L G ++
Sbjct: 120 IFAGKQLDDS-RTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTV 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +++ + ++ L++
Sbjct: 166 TLDIEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHL 221
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L++ + + +K KI+ IP Q L +G +L D + DY I +E T
Sbjct: 237 TGKTVTLDLDPCDTIENVKAKIQDKERIPPDQQRLIFAGKQLDDSRTLSDYNIQREST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
FSG L+D R L++Y I++ S + + L+
Sbjct: 348 IFSGKCLEDT-RKLTDYNIQKESTLHLVLR 376
>gi|375298514|dbj|BAL61084.1| polyubiqutin [Dianthus caryophyllus]
gi|375298516|dbj|BAL61085.1| polyubiquitin [Dianthus caryophyllus]
gi|375298518|dbj|BAL61086.1| polyubiquitin [Dianthus caryophyllus]
Length = 381
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|226477468|emb|CAX72428.1| ubiquitin C [Schistosoma japonicum]
Length = 229
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T+ ++ + + +P + I + + D +L + ++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214
>gi|297808451|ref|XP_002872109.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317946|gb|EFH48368.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 383
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 TGKTITLEVESSDTIDNVKAKIQDKEGIPLDQQRLIFAGKQLEDGRTLADYNIQKEST-- 67
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 68 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 120
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 121 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 166
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 222
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 238 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 295
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 296 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRL 348
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 349 IFAGKQLED-GRTLADYNIQKESTLHLVLR 377
>gi|168050741|ref|XP_001777816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670792|gb|EDQ57354.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 381
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|403330856|gb|EJY64339.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
Length = 304
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|226469788|emb|CAX76724.1| polyubiquitin [Schistosoma japonicum]
Length = 304
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKTQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K K + IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKTQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|401412470|ref|XP_003885682.1| Ubiquitin, related [Neospora caninum Liverpool]
gi|325120102|emb|CBZ55656.1| Ubiquitin, related [Neospora caninum Liverpool]
Length = 535
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|168024852|ref|XP_001764949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683758|gb|EDQ70165.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 318
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|226484007|emb|CAX79672.1| ubiquitin C [Schistosoma japonicum]
Length = 381
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYHIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|35187449|gb|AAQ84316.1| fiber polyubiquitin [Gossypium barbadense]
Length = 229
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 24/229 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T++ ++ + + +P + I + + D +L + ++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
>gi|82539669|ref|XP_724205.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478774|gb|EAA15770.1| Unknown protein [Plasmodium yoelii yoelii]
Length = 329
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 110 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 167
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 168 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 220
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 221 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 266
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 267 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 322
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 38 ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST------ 91
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + +DV+ +DT+ ++K KI +G P + L F+G
Sbjct: 92 ---LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 148
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R LS+Y I++ S + + L RL +Q L G +I L++
Sbjct: 149 KQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLDV 194
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 195 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 246
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 94 RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIV 153
+ +DV+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S + +
Sbjct: 36 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHL 94
Query: 154 FLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRED 213
L RL +Q L G +I L+++ S T+ ++ + + +P +
Sbjct: 95 VL-------------RLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 141
Query: 214 YIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 142 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 170
>gi|449434372|ref|XP_004134970.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
sativus]
gi|449479667|ref|XP_004155669.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
sativus]
Length = 197
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 31/194 (15%)
Query: 87 IIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIR 146
I++ F I+V DTV +KEKI G PI + L F+G L D+ R++ I
Sbjct: 4 ILVPEKGDTFGIEVGYFDTVLEIKEKIEKYQGIPIPKQTLIFNGRILQDD-RDVEFCEIL 62
Query: 147 EFSEIIV----------------FLKTMNRLRDNPPIRRLSFKVQTSSS---------LL 181
+ S I + +K N + D S T +S
Sbjct: 63 QHSRIQLVVANSELSAQSQIGRLIMKQHNMIPDPSSHHPQSGTTSTKNSNKLKVMVKPKC 122
Query: 182 NGASIPLEMQDSSTVNELRHLL--LSSKI---LPREDYIFIHKQRIMRDNCSLRWHGVEY 236
+ IP+E+ + V EL+ L L ++ LP E + FI+ + +M ++ S RWHGV +
Sbjct: 123 GNSKIPMEVNPTDNVGELKKELEKLQQRMQFHLPPEGFFFIYDRDVMDEDRSFRWHGVAH 182
Query: 237 GDILYVFKGTVSRG 250
GD + +F GT++ G
Sbjct: 183 GDTIEIFNGTITGG 196
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 3 IIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDME 56
I++ G F +EVG + VLEIK KIE+ IP QTL +G L D D+E
Sbjct: 4 ILVPEKGDTFGIEVGYFDTVLEIKEKIEKYQGIPIPKQTLIFNGRILQDDRDVE 57
>gi|6007448|gb|AAF00920.1|AF188158_1 ubiquitin [Oxytricha trifallax]
gi|403333775|gb|EJY66009.1| Putative ubiquitin C variant 2 [Oxytricha trifallax]
Length = 229
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|124805744|ref|XP_001350526.1| polyubiquitin [Plasmodium falciparum 3D7]
gi|6138833|emb|CAB59728.1| Polyubiquitin [Plasmodium falciparum 3D7]
gi|23496650|gb|AAN36206.1| polyubiquitin [Plasmodium falciparum 3D7]
Length = 381
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|92790178|emb|CAI83758.1| Polyubiqutin 5 [Polyplastron multivesiculatum]
Length = 220
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 1 GKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 57
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 58 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLI 111
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 112 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 157
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 158 LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 212
>gi|224065086|ref|XP_002301663.1| predicted protein [Populus trichocarpa]
gi|222843389|gb|EEE80936.1| predicted protein [Populus trichocarpa]
Length = 305
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGSTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|93359417|gb|ABF13286.1| polyubiquitin [Anser anser]
Length = 265
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T+ ++ + + +P + I + + D +L + ++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214
>gi|302393786|sp|P22589.2|UBIQP_PHYIN RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|3176|emb|CAA39250.1| ubiquitin [Phytophthora infestans]
gi|348684114|gb|EGZ23929.1| hypothetical protein PHYSODRAFT_284823 [Phytophthora sojae]
Length = 229
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +D++ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S +++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|92790170|emb|CAI83754.1| Polyubiqutin 1 [Polyplastron multivesiculatum]
Length = 379
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 8 GKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 64
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 65 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLI 118
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 119 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 164
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 165 LEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 219
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 236 GKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 292
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 293 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLI 346
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 347 FAGKQLEDN-RTLADYNIQKESTLHLVLR 374
>gi|413926510|gb|AFW66442.1| putative ubiquitin family protein, partial [Zea mays]
Length = 216
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 24/229 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T++ ++ + + +P + I + + D +L + ++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 214
>gi|195340400|ref|XP_002036801.1| GM12582 [Drosophila sechellia]
gi|194130917|gb|EDW52960.1| GM12582 [Drosophila sechellia]
Length = 321
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLLGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|301096555|ref|XP_002897374.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
gi|262107065|gb|EEY65117.1| ubiquitin family protein, putative [Phytophthora infestans T30-4]
gi|348684366|gb|EGZ24181.1| hypothetical protein PHYSODRAFT_353926 [Phytophthora sojae]
Length = 305
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +D++ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S +++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +D++ ++K+KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|308809920|ref|XP_003082269.1| polyubiquitin (ISS) [Ostreococcus tauri]
gi|116060737|emb|CAL57215.1| polyubiquitin (ISS) [Ostreococcus tauri]
Length = 288
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 61 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 118
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 119 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 171
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 172 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 217
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T++ ++ + + +P ++ IF KQ
Sbjct: 218 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 253
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 11 GIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGGMQIFVKTLT 61
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S +
Sbjct: 62 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLH 120
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRE 212
+ L RL +Q L G +I LE++ S T++ ++ + + +P +
Sbjct: 121 LVL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 167
Query: 213 DYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 168 QQRLIFAGKQLEDGRTLADYNIQKESTLHL 197
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 137 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 194
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 195 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 247
Query: 127 FFSGIELDD 135
F+G +L+D
Sbjct: 248 IFAGKQLED 256
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 117 DGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQT 176
DG P + L F+G +L+D R L++Y I++ S + + L RL +Q
Sbjct: 10 DGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQI 55
Query: 177 SSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEY 236
L G +I LE++ S T++ ++ + + +P + I + + D +L + ++
Sbjct: 56 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 115
Query: 237 GDILYV 242
L++
Sbjct: 116 ESTLHL 121
>gi|339233010|ref|XP_003381622.1| ubiquitin family protein [Trichinella spiralis]
gi|316979542|gb|EFV62324.1| ubiquitin family protein [Trichinella spiralis]
Length = 277
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRMLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|221122833|ref|XP_002155023.1| PREDICTED: polyubiquitin-C, partial [Hydra magnipapillata]
Length = 530
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 115/242 (47%), Gaps = 24/242 (9%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV L + + +K +I+ Q L +G EL D + Y + KE T
Sbjct: 309 GKTITLEVELADTIENVKARIQDKKGFLPDQQRLIFAGKELEDDRTLSYYNVQKEST--- 365
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + L+ S N I +K + ++V+ DT+ ++K KIH +G P+ + LF
Sbjct: 366 LHLVLRLRGSMN------IFVKTLTGKTITLEVEPADTIDNVKAKIHDKEGVPLDQQSLF 419
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G EL++E R LS+Y I++ + +FL+ +R N ++ L+ K+ I
Sbjct: 420 FAGKELENE-RTLSDYNIQKKYTLDLFLRIEGGMRIN--VKTLTRKI-----------IT 465
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTV 247
LE+ ++T+N ++ + + + ++ + + + SL + +E L+V T+
Sbjct: 466 LEVNPANTINNIKAKISDMDCILPDQHVLTFNGQQLDNERSLSSYNIESESTLFVELNTI 525
Query: 248 SR 249
R
Sbjct: 526 HR 527
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 35/229 (15%)
Query: 20 EPVLEIKR-KIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSS 78
EP IK+ KI+ IP Q L + +L DG + DY I K ++
Sbjct: 18 EPADTIKKAKIQDKEGIPPAYQHLIFANKKLEDGRTLVDYNIQKNSCLY------LVEVG 71
Query: 79 FNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFR 138
Q IHI S+ +++V+R +T+ +KE I + +G P + LFF+G L DE R
Sbjct: 72 IGQ---IHIKT-LTSKIISLEVERINTIEDVKENIKVREGVPPDQQRLFFAGNILKDE-R 126
Query: 139 NLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNE 198
LS+Y I E I+ + RL ++ L G +I LE++ + T+
Sbjct: 127 TLSDYNI--LKESIL-----------QHVLRLEGDMKIFVKTLTGKTITLEVEPADTIEN 173
Query: 199 LRHLLLSSKILPREDYI-----FIHKQRIMRDNCSLRWHGVEYGDILYV 242
++ +KI +E ++ I + + D+ +L ++ V+ L++
Sbjct: 174 VK-----AKIQDKEGFLPDQQRLIFAGKELEDDRTLSYYNVQKESTLHL 217
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 14 LEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINP 73
LEV + ++K I+ +P Q L +G L D + DY I+KE
Sbjct: 87 LEVERINTIEDVKENIKVREGVPPDQQRLFFAGNILKDERTLSDYNILKES--------- 137
Query: 74 FLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIE 132
LQ + I +K + ++V+ DT+ ++K KI +G + L F+G E
Sbjct: 138 ILQHVLRLEGDMKIFVKTLTGKTITLEVEPADTIENVKAKIQDKEGFLPDQQRLIFAGKE 197
Query: 133 LDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQD 192
L+D+ R LS Y +++ S + + L RL +Q L G + LE++
Sbjct: 198 LEDD-RTLSYYNVQKESTLHLVL-------------RLRGGMQIFVKTLTGKTFTLEVEP 243
Query: 193 SSTVNELRHLLLSSKILPREDYIFIHKQRIMRD----NCSLRWHGV 234
++T++E++ + + +P + I ++ D +C+++ V
Sbjct: 244 ANTIDEVKAKICDKEGVPPDQQRLIFHGILLEDATLSDCNVQKKSV 289
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 30/246 (12%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ Q L +G EL D + Y
Sbjct: 149 MKIFVKTLTGKTITLEVEPADTIENVKAKIQDKEGFLPDQQRLIFAGKELEDDRTLSYYN 208
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
+ KE T L + I +K + F ++V+ +T+ +K KI +G
Sbjct: 209 VQKEST---------LHLVLRLRGGMQIFVKTLTGKTFTLEVEPANTIDEVKAKICDKEG 259
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSS 178
P + L F GI L+D LS+ +++ S + + L RL +Q
Sbjct: 260 VPPDQQRLIFHGILLEDA--TLSDCNVQKKSVLQLVL-------------RLRGGMQIFV 304
Query: 179 SLLNGASIPLEMQDSSTVNELRHLLLSSK-ILP-REDYIFIHKQRIMRDNCSLRWHGVEY 236
L G +I LE++ + T+ ++ + K LP ++ IF K+ + D+ +L ++ V+
Sbjct: 305 KTLTGKTITLEVELADTIENVKARIQDKKGFLPDQQRLIFAGKE--LEDDRTLSYYNVQK 362
Query: 237 GDILYV 242
L++
Sbjct: 363 ESTLHL 368
>gi|219118861|ref|XP_002180197.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|219118863|ref|XP_002180198.1| ubiquitin extension protein 4 [Phaeodactylum tricornutum CCAP
1055/1]
gi|217408454|gb|EEC48388.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408455|gb|EEC48389.1| ubiquitin extension protein 4 [Phaeodactylum tricornutum CCAP
1055/1]
Length = 381
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|357440433|ref|XP_003590494.1| Ubiquitin [Medicago truncatula]
gi|355479542|gb|AES60745.1| Ubiquitin [Medicago truncatula]
Length = 312
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|1800281|gb|AAB68045.1| polyubiquitin [Fragaria x ananassa]
Length = 381
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIXDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|14596193|gb|AAK68824.1| Unknown protein [Arabidopsis thaliana]
Length = 229
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKPLPGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|449662451|ref|XP_004205544.1| PREDICTED: polyubiquitin-B-like isoform 2 [Hydra magnipapillata]
Length = 304
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ + T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|224069394|ref|XP_002326346.1| predicted protein [Populus trichocarpa]
gi|222833539|gb|EEE72016.1| predicted protein [Populus trichocarpa]
Length = 306
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGNTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVENSDTIDNVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGNTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G+ LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGNTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>gi|350537541|ref|NP_001232763.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
gi|197129065|gb|ACH45563.1| putative ubiquitin C variant 9 [Taeniopygia guttata]
Length = 229
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTIILEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G +LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTIILEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 224
>gi|27734341|gb|AAM51199.1| polyubiquitin [Lotharella amoeboformis]
Length = 175
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 22/195 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + L+ Q I +K + +DVD +DT+ ++K+KI +G P + L
Sbjct: 60 -LHLVLRLRGGAMQ-----IFVKTLTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRL 113
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR +Q L G +I
Sbjct: 114 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGS--------MQIFVKTLTGKTI 160
Query: 187 PLEMQDSSTVNELRH 201
L++ S T+N ++
Sbjct: 161 TLDVDSSDTINTVKQ 175
>gi|3789942|gb|AAC67552.1| polyubiquitin [Saccharum hybrid cultivar H32-8560]
Length = 381
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P +
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRX 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAXYNIQKESTLHL 221
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q +G +L DG + Y I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRXIFAGKQLEDGRTLAXYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|92790146|emb|CAI83742.1| Polyubiquitin 2 [Dasytricha ruminantium]
Length = 354
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 59 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 115
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 116 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 169
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 170 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 215
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 216 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 270
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 28 KIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHI 87
KI+ IP Q L +G +L D + DY I KE T L + I
Sbjct: 2 KIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST---------LHLVLRLRGGMQI 52
Query: 88 IIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIR 146
+K + +DV+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I+
Sbjct: 53 FVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDN-RTLADYNIQ 111
Query: 147 EFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSS 206
+ S + + L RL +Q L G +I L+++ S T+ ++ +
Sbjct: 112 KESTLHLVL-------------RLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDK 158
Query: 207 KILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + DN +L + ++ L++
Sbjct: 159 EGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 194
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 211 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 267
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 268 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 321
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 322 FAGKQLEDN-RTLADYNIQKESTLHLVLR 349
>gi|16552475|dbj|BAB71316.1| unnamed protein product [Homo sapiens]
Length = 388
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 131 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 188
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 189 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 241
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 242 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 287
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSL 229
LE++ S T+ ++ + + +P + I + + D +L
Sbjct: 288 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 330
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 72 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGG 122
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 123 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 181
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I LE++ S T+ ++ +
Sbjct: 182 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 228
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + D +L + ++ L++
Sbjct: 229 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 267
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 52/235 (22%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE---- 64
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
PS DT+ ++K KI +G P + L
Sbjct: 65 ------------------------PS----------DTIENVKAKIQDKEGIPPDQQRLI 90
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 91 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 136
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 137 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 191
>gi|388510652|gb|AFK43392.1| unknown [Medicago truncatula]
Length = 233
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNAKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 196 IFAGKQLED-GRTLADYNIQKESTLHLVLR 224
>gi|380446928|gb|AFD53810.1| ubiquitin, partial [Trichoderma harzianum]
Length = 264
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 14 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 71
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPS-RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + + ++V+ +DT+ ++K KI +G P + L
Sbjct: 72 -------LHLVLRLRGGMQIFVKTLTWKTVTLEVESSDTIDNVKSKIQDKEGIPPDQQRL 124
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 125 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 170
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 171 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQXESTLHL 226
>gi|92790148|emb|CAI83743.1| Polyubiqutin 3 [Dasytricha ruminantium]
Length = 363
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 68 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 124
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 125 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 178
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 179 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 224
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 225 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 279
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L D + DY I KE T L
Sbjct: 8 VKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST---------LHLVLRLRGG 58
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + +DV+ +DT+ ++K KI +G P + L F+G +L+D R L++Y
Sbjct: 59 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDN-RTLADY 117
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I L+++ S T+ ++ +
Sbjct: 118 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 164
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + DN +L + ++ L++
Sbjct: 165 QDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 203
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 220 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 276
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 277 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 330
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 331 FAGKQLEDN-RTLADYNIQKESTLHLVLR 358
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 103 TDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLR 162
+DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S + + L
Sbjct: 2 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDN-RTLADYNIQKESTLHLVL------- 53
Query: 163 DNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRI 222
RL +Q L G +I L+++ S T+ ++ + + +P + I +
Sbjct: 54 ------RLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 107
Query: 223 MRDNCSLRWHGVEYGDILYV 242
+ DN +L + ++ L++
Sbjct: 108 LEDNRTLADYNIQKESTLHL 127
>gi|92790156|emb|CAI83747.1| Polyubiqutin 1 [Isotricha prostoma]
Length = 366
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 71 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 127
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 128 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 181
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 182 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 227
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 228 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 282
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L D + DY I KE T L
Sbjct: 11 VKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST---------LHLVLRLRGG 61
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + +DV+ +DT+ ++K KI +G P + L F+G +L+D R L++Y
Sbjct: 62 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDN-RTLADY 120
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I L+++ S T+ ++ +
Sbjct: 121 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKI 167
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + DN +L + ++ L++
Sbjct: 168 QDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 206
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 223 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 279
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 280 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 333
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 334 FAGKQLEDN-RTLADYNIQKESTLHLVLR 361
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Query: 99 DVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTM 158
DV+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S + + L
Sbjct: 1 DVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDN-RTLADYNIQKESTLHLVL--- 56
Query: 159 NRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIH 218
RL +Q L G +I L+++ S T+ ++ + + +P + I
Sbjct: 57 ----------RLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIF 106
Query: 219 KQRIMRDNCSLRWHGVEYGDILYV 242
+ + DN +L + ++ L++
Sbjct: 107 AGKQLEDNRTLADYNIQKESTLHL 130
>gi|92790182|emb|CAI83760.1| Polyubiqutin 1 [Epidinium ecaudatum]
Length = 378
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 7 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 63
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 64 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 117
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 118 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 163
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 164 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 218
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 235 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 291
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 292 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 345
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 346 FAGKQLEDN-RTLADYNIQKESTLHLVLR 373
>gi|92790152|emb|CAI83745.1| Polyubiqutin 1 [Isotricha intestinalis]
Length = 301
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 6 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 62
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 63 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 116
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 117 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 162
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 163 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 217
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 158 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 214
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 215 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 268
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 269 FAGKQLEDN-RTLADYNIQKESTLHLVLR 296
>gi|92790160|emb|CAI83749.1| Polyubiqutin 3 [Isotricha prostoma]
Length = 374
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 3 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 59
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 60 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 113
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 114 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 159
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 160 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 214
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 231 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 287
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 288 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 341
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 342 FAGKQLEDN-RTLADYNIQKESTLHLVLR 369
>gi|197129049|gb|ACH45547.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
Length = 209
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 201
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIEL 133
F+G +L
Sbjct: 196 IFAGKQL 202
>gi|353238378|emb|CCA70326.1| related to UBI4-Ubiquitin [Piriformospora indica DSM 11827]
Length = 222
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 6 ITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST------ 59
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 60 ---LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAG 116
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R LS+Y I++ S + + L RL +Q L G +I LE+
Sbjct: 117 KQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEV 162
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 163 ESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 214
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 78 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 135
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 136 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 188
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 189 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 217
>gi|140083661|gb|ABO84843.1| ubiquitin B [Sus scrofa]
Length = 209
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSL 229
LE++ S T+ ++ + + +P + I + + D +L
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 208
>gi|92790164|emb|CAI83751.1| Polyubiqutin 1 [Entodinium caudatum]
Length = 297
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 2 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 58
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 59 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 112
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 113 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 158
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 159 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 213
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 154 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 210
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 211 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 264
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 265 FAGKQLEDN-RTLADYNIQKESTLHLVLR 292
>gi|42490818|gb|AAH66197.1| Ubiquitin B [Mus musculus]
Length = 305
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L +Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLPDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ + T+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSVTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|118370598|ref|XP_001018500.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89300267|gb|EAR98255.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 547
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+ + + IK KI+ IP Q L +G +L DG ++DY I KE T
Sbjct: 313 TGKTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +D++ DTV ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTVTLDLEPCDTVENVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +LDD R +S+Y I++ S + + L RL +Q L G +I
Sbjct: 424 IFAGKQLDDS-RTISDYNIQKESTLHLVL-------------RLRGGLQIFVKTLTGKTI 469
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 470 TLDLEASDTIENVKSKIQDKEGIPPDQQRLIFSGKCLEDFRTLSDYNIQKESTLHL 525
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+ + + IK KI+ IP Q L +G +L DG ++DY I KE T
Sbjct: 85 TGKTVTLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLQDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +D++ DTV ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTVTLDLEPFDTVENVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +LDD R + +Y I++ S + + L RL +Q L G ++
Sbjct: 196 IFAGKQLDDG-RTVQDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTV 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+ + S T+ ++ + + +P + I + + D+ +L + ++ L++
Sbjct: 242 TLDFEASDTIENIKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDYNIQKESTLHL 297
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+ + + + ++K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 9 TGKTITLDFEVSDTIEDVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +D + +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTVTLDFEASDTIENIKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +LDD R L +Y I++ S + + L RL +Q L G ++
Sbjct: 120 IFAGKQLDDG-RTLQDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTV 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ TV ++ + + +P + I + + D +++ + ++ L++
Sbjct: 166 TLDLEPFDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTVQDYNIQKESTLHL 221
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L++ + V +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 389 TGKTVTLDLEPCDTVENVKAKIQDKEGIPPDQQRLIFAGKQLDDSRTISDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +D++ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGLQIFVKTLTGKTITLDLEASDTIENVKSKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
FSG L+D FR LS+Y I++ S + + L+
Sbjct: 500 IFSGKCLED-FRTLSDYNIQKESTLHLVLR 528
>gi|111218904|gb|ABH08753.1| ubiquitin [Arabidopsis thaliana]
Length = 219
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST------ 56
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 57 ---LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 113
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R L++Y I++ S + + L RL +Q L G +I LE+
Sbjct: 114 KQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEV 159
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRG 250
+ S T++ ++ + + +P + I + + D +L + ++ L++ RG
Sbjct: 160 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--LRLRG 217
Query: 251 GY 252
G+
Sbjct: 218 GF 219
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 75 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 132
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 133 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 185
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 186 IFAGKQLED-GRTLADYNIQKESTLHLVLR 214
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 94 RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIV 153
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S + +
Sbjct: 1 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHL 59
Query: 154 FLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRED 213
L RL +Q L G +I LE++ S T++ ++ + + +P +
Sbjct: 60 VL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 106
Query: 214 YIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 107 QRLIFAGKQLEDGRTLADYNIQKESTLHL 135
>gi|198424689|ref|XP_002119546.1| PREDICTED: similar to ubiquitin isoform 2 [Ciona intestinalis]
gi|198424691|ref|XP_002119309.1| PREDICTED: similar to ubiquitin isoform 1 [Ciona intestinalis]
Length = 229
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S +++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|92790166|emb|CAI83752.1| Polyubiqutin 1 [Eudiplodinium maggii]
Length = 259
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 40 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 96
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 97 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 150
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 151 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 196
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 197 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 251
>gi|92790144|emb|CAI83741.1| Polyubiqutin 1 [Dasytricha ruminantium]
gi|92790150|emb|CAI83744.1| Polyubiqutin 4 [Dasytricha ruminantium]
gi|92790154|emb|CAI83746.1| Polyubiqutin 2 [Isotricha intestinalis]
gi|92790158|emb|CAI83748.1| Polyubiqutin 2 [Isotricha prostoma]
Length = 379
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 8 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 64
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 65 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 118
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 119 FAGKQLEDN-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 164
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + DN +L + ++ L++
Sbjct: 165 LDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKESTLHL 219
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 236 GKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 292
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 293 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLI 346
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 347 FAGKQLEDN-RTLADYNIQKESTLHLVLR 374
>gi|339233016|ref|XP_003381625.1| ubiquitin family protein [Trichinella spiralis]
gi|316979538|gb|EFV62321.1| ubiquitin family protein [Trichinella spiralis]
Length = 258
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 41 TGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 98
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 99 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRL 151
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 152 IFAGKQLED-GRMLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 197
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 198 TLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 253
>gi|193627304|ref|XP_001947010.1| PREDICTED: polyubiquitin-G-like [Acyrthosiphon pisum]
Length = 381
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|193678764|ref|XP_001950434.1| PREDICTED: polyubiquitin-A-like [Acyrthosiphon pisum]
Length = 686
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>gi|195587564|ref|XP_002083531.1| GD13314 [Drosophila simulans]
gi|194195540|gb|EDX09116.1| GD13314 [Drosophila simulans]
Length = 300
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHK 219
LE++ S T+ ++ + + +P + + I K
Sbjct: 242 TLEVEPSDTIENVKAKIQDKEGIPPDQQLNIDK 274
>gi|217074596|gb|ACJ85658.1| unknown [Medicago truncatula]
Length = 228
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 33/238 (13%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G +LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTIILEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 VFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKALTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFK 244
LE++ S T++ ++ + + +P + +QR++ +LR G+ ++Y+ K
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPD------QQRLIFAGNNLRMGGLS---LIYIQK 214
>gi|111218906|gb|ABH08754.1| ubiquitin [Arabidopsis thaliana]
Length = 220
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 3 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST------ 56
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 57 ---LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG 113
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R L++Y I++ S + + L RL +Q L G +I LE+
Sbjct: 114 KQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEV 159
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 160 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 211
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 75 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 132
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 133 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 185
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 186 IFAGKQLED-GRTLADYNIQKESTLHLVLR 214
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 94 RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIV 153
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S + +
Sbjct: 1 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHL 59
Query: 154 FLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRED 213
L RL +Q L G +I LE++ S T++ ++ + + +P +
Sbjct: 60 VL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ 106
Query: 214 YIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 107 QRLIFAGKQLEDGRTLADYNIQKESTLHL 135
>gi|102655942|gb|AAY33920.2| polyubiquitin [Euphorbia characias]
Length = 381
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKHLEDGRTLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQL-DHGRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 297
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K K + IP Q L +G L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKFQDKEGIPPDQQRLIFAGKHLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKHLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T++ ++ + + +P ++ IF KQ
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 201
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPSQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|356548435|ref|XP_003542607.1| PREDICTED: uncharacterized protein LOC100794475 [Glycine max]
Length = 196
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 34/190 (17%)
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
R F+++V DTV +KEK+ P+ + L +G L D N + ++
Sbjct: 10 GRSFSMEVGYFDTVLEIKEKVQKYQNIPVSKQTLILNGQVLHD---NDDPWKVKILHNTC 66
Query: 153 VFLKTMNRLRDNPPI-------RRLSFKVQTSSSLL-------------------NGASI 186
+ L+ +N + +L+ K+ + + L+ +
Sbjct: 67 IQLQVTPEKEENKELITSAHTKIQLNVKITSKTHLIPLEVDVNDTRLKLMVLPKSGTKKV 126
Query: 187 PLEMQDSSTVNELRHLL--LSSKI---LPREDYIFIHKQRIMRDNCSLRWHGVEYGDILY 241
P+E+ S V ELR L L ++ LP++ Y FI+KQ +M D+ S RWH V GD +
Sbjct: 127 PVEVNASDNVGELRKELQKLHQRVQFHLPQDGYFFIYKQNVMDDDRSFRWHHVAQGDTIE 186
Query: 242 VFKGTVSRGG 251
+F G+V+ G
Sbjct: 187 IFNGSVTGGS 196
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G F +EVG + VLEIK K+++ NIP + QTL ++G L D D I+ T I
Sbjct: 10 GRSFSMEVGYFDTVLEIKEKVQKYQNIPVSKQTLILNGQVLHDNDDPWKVKIL-HNTCIQ 68
Query: 69 LTINPFLQSS----FNQHDKIHIIIKFPSRKFNI--DVDRTDT 105
L + P + + + H KI + +K S+ I +VD DT
Sbjct: 69 LQVTPEKEENKELITSAHTKIQLNVKITSKTHLIPLEVDVNDT 111
>gi|6934302|gb|AAF31707.1|AF221858_1 polyubiquitin [Euphorbia esula]
Length = 215
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 24/230 (10%)
Query: 14 LEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINP 73
LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 1 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-------- 52
Query: 74 FLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIE 132
L + I +K + ++V+ +DT+ ++K KI +G P + L F+G +
Sbjct: 53 -LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 111
Query: 133 LDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQD 192
L+D R L++Y I++ S + + L RL +Q L G +I LE++
Sbjct: 112 LED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVES 157
Query: 193 SSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 158 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 207
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 72 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST--- 128
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 129 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 182
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 183 FAGKQLED-GRTLADYNIQKESTLHLVLR 210
>gi|343485991|dbj|BAK61751.1| ubiquitin [Sphaerozoum punctatum]
Length = 228
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + ++ KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESSDTISNVEAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 196 IFAGKQLED-GRTLADYNIQKESTLHLVLR 224
>gi|1684857|gb|AAB36546.1| polyubiquitin [Phaseolus vulgaris]
Length = 215
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 24/230 (10%)
Query: 14 LEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINP 73
LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 1 LEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-------- 52
Query: 74 FLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIE 132
L + I +K + ++V+ +DT+ ++K KI +G P + L F+G +
Sbjct: 53 -LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 111
Query: 133 LDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQD 192
L+D R L++Y I++ S + + L RL +Q L G +I LE++
Sbjct: 112 LED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVES 157
Query: 193 SSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 158 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 207
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 71 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 128
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 129 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 181
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 182 IFAGKQLED-GRTLADYNIQKESTLHLVLR 210
>gi|110736490|dbj|BAF00213.1| polyubiquitin 4 UBQ4 [Arabidopsis thaliana]
Length = 351
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 43/268 (16%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEI----------IVFLKTMN------RLRDNPPIRRL 170
F+G +L+D R L++Y I++ S + +F+KT+ + + I +
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178
Query: 171 SFKVQTSSSL----------------LNGASIPLEMQDSSTVNELRHLLLSSKILPREDY 214
K+Q S+L L G +I LE++ S T++ ++ + + +P +
Sbjct: 179 KAKIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 238
Query: 215 IFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 239 RLIFAGKQLEDGRTLADYNIQKESTLHL 266
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 206 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 263
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 264 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 316
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 317 IFAGKQLED-GRTLADYNIQKESTLHLVLR 345
>gi|340504493|gb|EGR30931.1| ubiquitin family protein, putative [Ichthyophthirius multifiliis]
Length = 329
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 33 TGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 90
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +D++ ++K KI +G P + L
Sbjct: 91 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRL 143
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 144 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 189
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 190 TLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 245
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 185 TGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 242
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +D++ ++K KI +G P + L
Sbjct: 243 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDSIENVKAKIQDKEGIPPDQQRL 295
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 296 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 324
>gi|578546|emb|CAA84814.1| ubiquitin [Tetrahymena pyriformis]
Length = 379
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + IK KI+ IP+ Q L +G +L DG + DY I KE T
Sbjct: 86 GKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQKEST--- 142
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K + ++V+ +D + S+K KI +G P + L
Sbjct: 143 ------LHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESIKSKIQDKEGIPSDQQRLI 196
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D RN+S+Y I++ S + + L RL +Q L G +I
Sbjct: 197 FAGKQLED-GRNISDYNIQKESTLHLVL-------------RLRGGMQVFVKTLTGKTIT 242
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L++ S + ++ + + +P + I + + D ++ + ++ L++
Sbjct: 243 LDVDSSDNIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQKESTLHL 297
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + IK KI+ IP+ Q L +G +L DG ++ DY I KE T
Sbjct: 162 GKTITLEVNSSDNIESIKSKIQDKEGIPSDQQRLIFAGKQLEDGRNISDYNIQKEST--- 218
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K + +DVD +D + ++K KI +G P + L
Sbjct: 219 ------LHLVLRLRGGMQVFVKTLTGKTITLDVDSSDNIENVKAKIQDKEGIPSDQQRLI 272
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R +S+Y I++ S + + L RL +Q L G ++
Sbjct: 273 FAGKQLED-GRTVSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTLT 318
Query: 188 LEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
L++ + + ++ + + +P ++ IF KQ
Sbjct: 319 LDINSTDNIENVKAKIQDKEGIPTDQQRLIFAGKQ 353
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + IK+KI+ IP+ Q L +G +L +G + DY I KE T
Sbjct: 10 GKTVTLDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRTVSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
+ + + +K + +DV +TD + ++K KI +G P + L
Sbjct: 67 ------VHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R +S+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTVSDYNIQKESTLHLVL-------------RLRGGMQVFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE+ S + ++ + + +P + I + + D ++ + ++ L++
Sbjct: 167 LEVNSSDNIESIKSKIQDKEGIPSDQQRLIFAGKQLEDGRNISDYNIQKESTLHL 221
>gi|630479|pir||S43306 polyubiquitin 6 - Geodia cydonium
Length = 448
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ + +V RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKETLHLV---------------RLRGGMQIFVKTLTGKTI 163
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T+ ++ + + +P + I + + D +L + ++
Sbjct: 164 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 212
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 27/229 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE +
Sbjct: 159 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETLHL 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
+ I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -----------VRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 267
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ + +V RL +Q L G +I
Sbjct: 268 IFAGKQLED-GRTLSDYNIQKETLHLVV--------------RLRGGMQIFVKTLTGKTI 312
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T+ ++ + + +P + I + + D +L + ++
Sbjct: 313 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 361
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE +
Sbjct: 308 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKETLHL 367
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
+ I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 368 -----------VRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 416
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ + +V L+
Sbjct: 417 IFAGKQLED-GRTLSDYNIQKETLHLVRLR 445
>gi|413926506|gb|AFW66438.1| putative ubiquitin family protein, partial [Zea mays]
gi|413926515|gb|AFW66447.1| ubiquitin2, partial [Zea mays]
Length = 349
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 43/268 (16%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEI----------IVFLKTMN------RLRDNPPIRRL 170
F+G +L+D R L++Y I++ S + +F+KT+ + + I +
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178
Query: 171 SFKVQTSSSL----------------LNGASIPLEMQDSSTVNELRHLLLSSKILPREDY 214
K+Q S+L L G +I LE++ S T++ ++ + + +P +
Sbjct: 179 KAKIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 238
Query: 215 IFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 239 RLIFAGKQLEDGRTLADYNIQKESTLHL 266
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 206 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 263
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 264 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 316
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 317 IFAGKQLED-GRTLADYNIQKESTLHLVLR 345
>gi|27806505|ref|NP_776558.1| polyubiquitin-B [Bos taurus]
gi|645|emb|CAA79146.1| polyubiquitin [Bos taurus]
Length = 305
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L +Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLFDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|15982787|gb|AAL09741.1| AT4g05320/C17L7_240 [Arabidopsis thaliana]
Length = 381
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L L +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLS-------------LRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>gi|154339611|ref|XP_001562497.1| polyubiquitin, putative [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063080|emb|CAM39530.1| polyubiquitin, putative [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 1068
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 237 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 394 ALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 429
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 541 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 598
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 599 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRL 651
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 652 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 697
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 698 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 733
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 9 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 166 ALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 201
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 845 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 902
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 903 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 955
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 956 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 1001
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 1002 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 1037
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 465 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 622 ALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 657
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 769 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 826
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 827 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRL 879
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 880 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 925
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 926 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 961
>gi|390334818|ref|XP_003724023.1| PREDICTED: uncharacterized protein LOC754856 [Strongylocentrotus
purpuratus]
Length = 1673
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 424 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 469
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 470 TLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 541 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 598
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 599 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRL 651
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 652 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 697
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 698 TLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 753
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 769 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 826
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 827 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRL 879
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 880 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 925
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 926 TLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 981
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 997 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 1054
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 1055 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRL 1107
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 1108 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 1153
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 1154 TLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1209
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 1225 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 1282
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 1283 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRL 1335
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 1336 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 1381
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 1382 TLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1437
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 1453 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 1510
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 1511 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRL 1563
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 1564 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 1609
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 1610 TLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 1665
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 30/239 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I K T +
Sbjct: 9 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKXQTFL 68
Query: 68 ---DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKR 123
L +N + I +K + ++V+ +D++ ++K KI +G P +
Sbjct: 69 FFYSLQVN------------MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQ 116
Query: 124 MLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNG 183
L F+G +L+D R LS+Y I++ S + + L RL +Q L G
Sbjct: 117 QRLIFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTG 162
Query: 184 ASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+I LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 163 KTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|157877206|ref|XP_001686933.1| putative polyubiquitin [Leishmania major strain Friedlin]
gi|68130008|emb|CAJ09316.1| putative polyubiquitin [Leishmania major strain Friedlin]
Length = 837
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G VLEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 389 TGKTIVLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 500 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 545
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + + +L + ++ L++
Sbjct: 546 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 601
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 9 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + + +L + ++ L++
Sbjct: 166 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 221
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 617 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 728 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 773
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + + +L + ++ L++
Sbjct: 774 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 829
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 237 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + + +L + ++ L++
Sbjct: 394 VLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 449
>gi|239788925|dbj|BAH71115.1| ACYPI006410 [Acyrthosiphon pisum]
Length = 230
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S ++ ++ + + +P + I + + D +L + ++
Sbjct: 166 TLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214
>gi|224503947|gb|ACN53545.1| polyubiquitin-like protein [Piriformospora indica]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++K I+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDDVKTNIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYDIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ +K KI +G P +
Sbjct: 67 -------LHLVLRLRGGMQIFLKTLTGKTITLEVESSDTIDDVKTKIQDKEGIPPDQQRW 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL+ +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLTGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|428175943|gb|EKX44830.1| ubiquitin [Guillardia theta CCMP2712]
Length = 229
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ +K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|344243115|gb|EGV99218.1| Ubiquitin [Cricetulus griseus]
Length = 430
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRPLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ T+ ++ + + +P + I + + D L + ++ L++
Sbjct: 166 TLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKESTLHL 221
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV ++ + +K I+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPRDTIENVKAWIQDKEGIPPDQQRLIFAGKQLEDGRPLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ DT+ ++K I +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPRDTIENVKAWIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRPLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRH 201
LE++ S+T+ + +
Sbjct: 394 TLEVEPSNTIKKSKQ 408
>gi|154346116|ref|XP_001568995.1| putative polyubiquitin [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066337|emb|CAM44128.1| putative polyubiquitin [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 992
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 465 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 622 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 657
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 693 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 804 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 849
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 850 ALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 885
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 9 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 166 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 201
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 237 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 394 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 429
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 845 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 902
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 903 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRL 955
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L +E R LS+Y I++ S + + L+
Sbjct: 956 IFAGKQL-EEGRTLSDYNIQKESTLHLVLR 984
>gi|324525461|gb|ADY48550.1| Polyubiquitin, partial [Ascaris suum]
Length = 263
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G ++
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTL 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S V ++ + + +P + I + + D+ +L + ++ L++
Sbjct: 166 TLEVEPSDAVQHVKAKIQDKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLHL 221
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 26/190 (13%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D V+ +K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSF-------KVQTSSS 179
F+G +L+D+ R LS+Y I++ S + + L RLR + +F +V++S S
Sbjct: 196 IFAGKQLEDD-RTLSDYNIQKESTLHLVL----RLRGGVRVSANAFTCGDVTPQVESSGS 250
Query: 180 L----LNGAS 185
+ L GAS
Sbjct: 251 VKKGELEGAS 260
>gi|167945|gb|AAA33266.1| ubiquitin [Dictyostelium discoideum]
Length = 229
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G+ LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GNTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S + ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|281212331|gb|EFA86491.1| hypothetical protein PPL_00285 [Polysphondylium pallidum PN500]
Length = 1074
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 39/255 (15%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ----RIMRD---------NCSLRWH 232
LE++ S T+ ++ + + +P ++ IF KQ R + D + LR
Sbjct: 167 LEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 226
Query: 233 GVEYGDILYVFKGTV 247
GVE D + K +
Sbjct: 227 GVEGSDTIENVKTKI 241
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 44/212 (20%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 162 GKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 218
Query: 69 LTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFF 128
+H++++ V+ +DT+ ++K KI +G P + L F
Sbjct: 219 ----------------LHLVLRLRG------VEGSDTIENVKTKIQDKEGIPPDQQRLIF 256
Query: 129 SGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPL 188
+G +L+D R LS+Y I++ S + + L RL +Q L G +I L
Sbjct: 257 AGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITL 302
Query: 189 EMQDSSTVNELRHLLLSSKILPREDYIFIHKQ 220
E++ S T+ ++ +KI +E+ +F K+
Sbjct: 303 EVEGSDTIENVK-----TKIQDKEEGLFFKKK 329
>gi|324525469|gb|ADY48551.1| Polyubiquitin, partial [Ascaris suum]
Length = 263
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLLDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G ++
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTL 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S V ++ + + +P + I + + D+ +L + ++ L++
Sbjct: 166 TLEVEPSDAVQHVKAKIQDKEGIPPDQQRLIFAGKQLEDDRTLSDYNIQKESTLHL 221
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 26/190 (13%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D V+ +K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSF-------KVQTSSS 179
F+G +L+D+ R LS+Y I++ S + + L RLR + +F +V++S S
Sbjct: 196 IFAGKQLEDD-RTLSDYNIQKESTLHLVL----RLRGGVRVSANAFACGDVTPQVESSDS 250
Query: 180 L----LNGAS 185
+ L GAS
Sbjct: 251 VKKGELEGAS 260
>gi|340059193|emb|CCC53576.1| putative polyubiquitin [Trypanosoma vivax Y486]
Length = 282
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 26/221 (11%)
Query: 3 IIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVK 62
++ G LEV + + +K KI+ IP Q L +G +L +G + DY I K
Sbjct: 41 LVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQK 100
Query: 63 EGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPI 121
E T L + I +K + ++V+ +DT+ ++K KI +G P
Sbjct: 101 EST---------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPP 151
Query: 122 KRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLL 181
+ L F+G +L +E R L++Y I++ S + + L RL +Q L
Sbjct: 152 DQQRLIFAGKQL-EEGRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTL 197
Query: 182 NGASIPLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
G +I LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 198 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 238
>gi|156396888|ref|XP_001637624.1| predicted protein [Nematostella vectensis]
gi|156224738|gb|EDO45561.1| predicted protein [Nematostella vectensis]
Length = 147
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + F +DV+ +DTV S+KEKI +G P K L
Sbjct: 67 -------LHLVLRLRGGMQISVKAHWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLL 119
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFL 155
+ EL D R+L++Y I++ S + +FL
Sbjct: 120 YEEEELVDN-RSLADYNIKQGSILHLFL 146
>gi|313215765|emb|CBY16339.1| unnamed protein product [Oikopleura dioica]
Length = 188
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELR 200
LE++ S T+ ++
Sbjct: 166 TLEVEASDTIENVK 179
>gi|28436485|gb|AAO43309.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 29 TGKTITLEVQSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 86
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI + P + L
Sbjct: 87 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRL 139
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 140 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 185
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 186 TLEVESSDTIDNVKAKIQDKEGIPPDQKRLIFAGKQLEDGRTLAVYNIQKESTLHL 241
>gi|16191634|emb|CAC94926.1| putative ubiquitin [Pleurotus sp. 'Florida']
Length = 243
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 66 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 123
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 124 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 176
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 177 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 222
Query: 187 PLEMQDSSTVNELR 200
LE++ S T++ ++
Sbjct: 223 TLEVESSDTIDNVK 236
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 7 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGG 57
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 58 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 116
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I LE++ S T++ ++ +
Sbjct: 117 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 163
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + D +L + ++ L++
Sbjct: 164 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 202
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 103 TDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLR 162
+DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S + + L
Sbjct: 1 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVL------- 52
Query: 163 DNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRI 222
RL +Q L G +I LE++ S T++ ++ + + +P + I +
Sbjct: 53 ------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 106
Query: 223 MRDNCSLRWHGVEYGDILYV 242
+ D +L + ++ L++
Sbjct: 107 LEDGRTLSDYNIQKESTLHL 126
>gi|578545|emb|CAA84813.1| ubiquitin [Tetrahymena pyriformis]
Length = 379
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + IK+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 86 GKTITLDVAQTDNIENIKQKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKEST--- 142
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + IK + +DVD D + ++K KI +G P + L
Sbjct: 143 ------LHLVLRLRGGMQVFIKTLTGKTITLDVDSADNIENVKAKIQDKEGIPPDQQRLI 196
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R +S+Y I++ S + + L RL +Q L G +I
Sbjct: 197 FAGKQLED-GRTVSDYNIQKESTLHLVL-------------RLRGGMQVFVKTLTGKTIT 242
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L++ S + ++ + + +P + I + + D ++ + ++ L++
Sbjct: 243 LDVDSSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHL 297
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + IK+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTVTLDVASTDNIENIKQKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
+ + + +K + +DV +TD + ++K+KI +G P + L
Sbjct: 67 ------VHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKQKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R +S+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTVSDYNIQKESTLHLVL-------------RLRGGMQVFIKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L++ + + ++ + + +P + I + + D ++ + ++ L++
Sbjct: 167 LDVDSADNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHL 221
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 238 GKTITLDVDSSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKEST--- 294
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ TD + ++K KI +G P + L
Sbjct: 295 ------LHLVLRLRGGMQIFVKTLTGKTITLDVNSTDNIENVKAKIQDKEGIPPDQQRLI 348
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R++++Y I + S + + L+
Sbjct: 349 FAGKQLED-GRSIADYNISKESTLHLVLR 376
>gi|18421671|ref|NP_568552.1| polyubiquitin 9 [Arabidopsis thaliana]
gi|75170661|sp|Q9FHQ6.1|UBQ9_ARATH RecName: Full=Polyubiquitin 9; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Contains: RecName:
Full=Ubiquitin-related 4; Flags: Precursor
gi|9757974|dbj|BAB08310.1| polyubiquitin [Arabidopsis thaliana]
gi|332006830|gb|AED94213.1| polyubiquitin 9 [Arabidopsis thaliana]
Length = 322
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 37/237 (15%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ +P Q L +G +L DG + DY I KE T
Sbjct: 87 TGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKEST-- 144
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I ++ +RK ++V+ +DT ++K KI +G P + L
Sbjct: 145 -------LHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRL 197
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q + L G +I
Sbjct: 198 IFAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLCGGMQIFVNTLTGKTI 243
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVF 243
LE++ S T++ ++ +KI +E RI D L + G + D Y
Sbjct: 244 TLEVESSDTIDNVK-----AKIQDKE--------RIQPDQQRLIFAGEQLEDGYYTL 287
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ I IP Q L SG L DG + DY I K + L +
Sbjct: 28 VKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQK---------DSILHLALRLRGG 78
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +LDD R L++Y
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDG-RTLADY 137
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L +I LE++ S T + ++ +
Sbjct: 138 NIQKESTLHLVL-------------RLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKI 184
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + D +L + ++ L++
Sbjct: 185 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 223
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 91 FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSE 150
+ IDV +DT+ ++K KI I+G P+ + L FSG LDD R L++Y I++ S
Sbjct: 10 LTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDG-RTLADYSIQKDSI 68
Query: 151 IIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILP 210
+ + L RL +Q L G +I LE++ S T++ ++ + + +P
Sbjct: 69 LHLAL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVP 115
Query: 211 REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ I + + D +L + ++ L++
Sbjct: 116 PDQQRLIFAGKQLDDGRTLADYNIQKESTLHL 147
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Query: 13 VLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-KIDLTI 71
LEV + +K KI+ IP Q L +G +L DG + DY I KE T + L +
Sbjct: 168 ALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 227
Query: 72 NPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGI 131
+Q N + ++V+ +DT+ ++K KI + + L F+G
Sbjct: 228 CGGMQIFVN---------TLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGE 278
Query: 132 ELDDEFRNLSEYGIREFSEIIVFLK 156
+L+D + L++Y I++ S + + L+
Sbjct: 279 QLEDGYYTLADYNIQKESTLHLVLR 303
>gi|28436487|gb|AAO43310.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + IK KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 29 TGKTITLEVKSSDTIDNIKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 86
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + K ++V+ +DT+ ++K KI + P + L
Sbjct: 87 -------LHLVLRLRGGMQIFVKTLTGKIITLEVESSDTIDNVKAKIQDKEWIPPDQQRL 139
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 140 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 185
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 186 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQKESTLHL 241
>gi|74024980|ref|XP_829056.1| polyubiquitin [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834442|gb|EAN79944.1| polyubiquitin, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 685
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 9 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQL-EEGRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 166 ALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 201
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 237 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQL-EEGRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 394 ALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 429
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 465 TGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R L++Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQL-EEGRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 622 ALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 657
>gi|326427340|gb|EGD72910.1| ubiquitin [Salpingoeca sp. ATCC 50818]
Length = 220
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 35/237 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIII--KFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRML 125
+H+I + ++V+ +D++ ++K KI +G P +
Sbjct: 67 -----------------LHLIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQR 109
Query: 126 LFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGAS 185
L F+G +L+D R LS+Y I++ S + + L RL +Q L G +
Sbjct: 110 LIFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKT 155
Query: 186 IPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 156 ITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 212
>gi|28436483|gb|AAO43308.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 250
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 29 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 86
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI + P + L
Sbjct: 87 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRL 139
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 140 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 185
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 186 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAVYNIQKESTLHL 241
>gi|339896986|ref|XP_001463552.2| polyubiquitin [Leishmania infantum JPCM5]
gi|321399001|emb|CAM65917.2| polyubiquitin [Leishmania infantum JPCM5]
Length = 866
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 63 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 120
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 121 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 173
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 174 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 219
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 220 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 255
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 291 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 348
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 349 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 401
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 402 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 447
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 448 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 483
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 519 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 576
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 577 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 629
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 630 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 675
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 676 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 711
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 26/190 (13%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L +G + DY I KE T L + I +K
Sbjct: 13 GIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST---------LHLVLRLRGGMQIFVKTLT 63
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L +E R LS+Y I++ S +
Sbjct: 64 GKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EEGRTLSDYNIQKESTLH 122
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILP-- 210
+ L RL +Q L G +I LE++ S T+ ++ + + +P
Sbjct: 123 LVL-------------RLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPD 169
Query: 211 REDYIFIHKQ 220
++ IF KQ
Sbjct: 170 QQRLIFAGKQ 179
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 671 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 728
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 729 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 781
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L +E R LS+Y I++ S + + L+
Sbjct: 782 IFAGKQL-EEGRTLSDYNIQKESTLHLVLR 810
>gi|339232992|ref|XP_003381613.1| ubiquitin family protein [Trichinella spiralis]
gi|316979552|gb|EFV62333.1| ubiquitin family protein [Trichinella spiralis]
Length = 193
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDSIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS Y I++ S + + L RL +Q S++ L G I
Sbjct: 120 IFAGKQLED-GRMLSNYNIQKESTLHLVL-------------RLRGGMQISATTLTGKHI 165
Query: 187 PLEMQDSSTVNELR 200
+E++ S T +R
Sbjct: 166 TVEVEPSDTPESVR 179
>gi|90076064|dbj|BAE87712.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LE + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEAEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RLR + + L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGGDAVSYV--------KTLTGKTI 166
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 167 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 202
>gi|297833748|ref|XP_002884756.1| hypothetical protein ARALYDRAFT_478302 [Arabidopsis lyrata subsp.
lyrata]
gi|297330596|gb|EFH61015.1| hypothetical protein ARALYDRAFT_478302 [Arabidopsis lyrata subsp.
lyrata]
Length = 598
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 24/242 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-K 66
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 63 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGHTLADYSIQKESTLH 122
Query: 67 IDLTINPFLQSSFNQHDKIHIIIKFPSRKF-----NIDVDRTDTVRSLKEKIHIIDGTPI 121
+ L + +Q +I FP + F ++V+ +DT+ S+K KI +G
Sbjct: 123 LVLRLRGGMQI---------FVITFPGKNFTGETLTLEVESSDTIDSVKAKIQDREGLRP 173
Query: 122 KRMLLFFSGIEL-DDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSL 180
L F G EL + R L++YGI+ S L RLR N I F +
Sbjct: 174 DHQRLSFHGEELFTKDGRTLADYGIQNKSA----LHLGTRLRGNMYI----FVKNLPYNT 225
Query: 181 LNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDIL 240
G + LE++ S T++ ++ + + +P + + I + + +L + ++ G L
Sbjct: 226 FTGENFILEVESSDTIDNVKAKIQEKEGIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTL 285
Query: 241 YV 242
Y+
Sbjct: 286 YL 287
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 31 QIFNIPATSQTLAV------SGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
QI+ T +T+ + S +L DGL + DY I KE T L
Sbjct: 4 QIYAKTLTEKTITLDVETSDSIHDLEDGLTLADYSIQKEST---------LHLVLRLRGG 54
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D L++Y
Sbjct: 55 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG-HTLADY 113
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RLR I ++F + G ++ LE++ S T++ ++ +
Sbjct: 114 SIQKESTLHLVL----RLRGGMQIFVITFPGKN----FTGETLTLEVESSDTIDSVKAKI 165
Query: 204 LSSKIL-PREDYIFIHKQRIM-RDNCSLRWHGVEYGDILYVFKGTVSRG 250
+ L P + H + + +D +L +G++ L++ GT RG
Sbjct: 166 QDREGLRPDHQRLSFHGEELFTKDGRTLADYGIQNKSALHL--GTRLRG 212
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 35/248 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELV--DGLDMEDYPIVKE-- 63
G LEV + + +K KI+ + Q L+ G EL DG + DY I +
Sbjct: 144 TGETLTLEVESSDTIDSVKAKIQDREGLRPDHQRLSFHGEELFTKDGRTLADYGIQNKSA 203
Query: 64 ---GTKIDLTINPFLQS-SFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGT 119
GT++ + F+++ +N F F ++V+ +DT+ ++K KI +G
Sbjct: 204 LHLGTRLRGNMYIFVKNLPYN---------TFTGENFILEVESSDTIDNVKAKIQEKEGI 254
Query: 120 PIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSS 179
P+ L F+G L+ R L+ Y I++ S + + + R +Q
Sbjct: 255 PMDLHRLIFAGKPLEGG-RTLAHYNIQKGSTLYL-------------VTRFRCGMQIFVK 300
Query: 180 LLNGASIPLEMQDSSTVNELRHLLLSSK-ILPR-EDYIFIHKQRIMRDNCSLRWHGVEYG 237
L G I LE++ T+ ++ ++ + I P + IF+ K+ ++D C+ +G++
Sbjct: 301 TLTGKRINLEVESWDTIENVKAMIQDKEGIQPDLQRLIFLGKE--LKDRCTPADYGIQKE 358
Query: 238 DILYVFKG 245
L++ G
Sbjct: 359 STLHLVLG 366
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 37/246 (15%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ P Q L G EL DG + DY I E T
Sbjct: 375 GGKIITLEVVSSDTIESVKAKIQDKVGSPPDQQRLIFLGHELEDGRTLADYDIRNEST-- 432
Query: 68 DLTINPFLQSSFNQHDKIHIIIKF--------PSRKFNIDVDRTDTVRSLKEKIHIIDGT 119
L+ F+ + I +K + ++V+ +DT+ ++K KI G
Sbjct: 433 -------LRLFFHIPHGMQIFVKTYAFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGI 485
Query: 120 PIKRMLLFFSGIELDDEFRNLSEYGIREFSEI-IVFLKTMNRLRDNPPIRRLSFKVQTSS 178
P+ R L F G L R L +Y I++ S I +FL+ +Q
Sbjct: 486 PLDRQSLIFGGRVLVGT-RTLLDYNIQKESTIHQLFLQRGG--------------MQIFI 530
Query: 179 SLLNGASIPLEMQDSSTVNELRH-LLLSSKILP-REDYIFIHKQRIMRDNCSLRWHGVEY 236
L G +I LE+++S T+ ++ + + I P ++ IF KQ + D +L + +
Sbjct: 531 KTLTGKTIMLEVENSDTIANVKEKIQVKEGITPVQQRLIFFGKQ--LEDGVTLGDYCIHK 588
Query: 237 GDILYV 242
LY+
Sbjct: 589 NSTLYL 594
>gi|66807485|ref|XP_637465.1| hypothetical protein DDB_G0286907 [Dictyostelium discoideum AX4]
gi|302595959|sp|P0CG77.1|UBIQD_DICDI RecName: Full=Polyubiquitin-D; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|167943|gb|AAA33265.1| ubiquitin [Dictyostelium discoideum]
gi|167953|gb|AAA33270.1| ubiquitin [Dictyostelium discoideum]
gi|60465881|gb|EAL63951.1| hypothetical protein DDB_G0286907 [Dictyostelium discoideum AX4]
Length = 229
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S + ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|357498827|ref|XP_003619702.1| Ubiquitin-like protein [Medicago truncatula]
gi|355494717|gb|AES75920.1| Ubiquitin-like protein [Medicago truncatula]
Length = 245
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 60 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 117
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 118 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 170
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 171 IFAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 216
Query: 187 PLEMQDSSTVNELRHLLLSSKILPR 211
LE++ S T++ ++ + + +P+
Sbjct: 217 TLEVESSDTIDNVKAKIQDKEGIPQ 241
>gi|218198762|gb|EEC81189.1| hypothetical protein OsI_24195 [Oryza sativa Indica Group]
Length = 223
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 24/231 (10%)
Query: 13 VLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTIN 72
EV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 8 TCEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST------- 60
Query: 73 PFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGI 131
L + I +K + ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 61 --LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGK 118
Query: 132 ELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQ 191
+L+D R L++Y I++ S + + L RL +Q L G +I LE++
Sbjct: 119 QLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVE 164
Query: 192 DSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 165 SSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 215
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 79 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 136
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 137 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 189
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 190 IFAGKQLED-GRTLADYNIQKESTLHLVLR 218
>gi|29836445|gb|AAM78180.1| putative polyubiquitin [Gossypium herbaceum]
gi|29836447|gb|AAM78181.1| putative polyubiquitin [Gossypium raimondii]
gi|29836449|gb|AAM78182.1| putative polyubiquitin [Gossypium barbadense]
gi|29836451|gb|AAM78183.1| putative polyubiquitin [Gossypium barbadense]
gi|29836453|gb|AAM78184.1| putative polyubiquitin [Gossypioides kirkii]
Length = 204
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 1 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGG 51
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y
Sbjct: 52 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADY 110
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I LE++ S T++ ++ +
Sbjct: 111 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 157
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRGGY 252
+ +P + I + + D +L + ++ L++ RGG+
Sbjct: 158 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--LRLRGGF 204
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 60 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 117
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 118 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 170
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 171 IFAGKQLED-GRTLADYNIQKESTLHLVLR 199
>gi|625174|gb|AAC84175.1| ubiquitin [Artemia franciscana]
Length = 225
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 9 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGG 59
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 60 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 118
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I LE++ S T+ ++ +
Sbjct: 119 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI 165
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + D +L + ++ L++
Sbjct: 166 QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 204
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 68 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 125
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 126 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 178
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 179 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 207
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 103 TDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLR 162
+DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S + + L
Sbjct: 3 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVL------- 54
Query: 163 DNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRI 222
RL +Q L G +I LE++ S T+ ++ + + +P + I +
Sbjct: 55 ------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 108
Query: 223 MRDNCSLRWHGVEYGDILYV 242
+ D +L + ++ L++
Sbjct: 109 LEDGRTLSDYNIQKESTLHL 128
>gi|169635149|gb|ACA58351.1| ubiquitin-like protein [Sandersonia aurantiaca]
Length = 189
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP 210
LE++ S T++ ++ + + +P
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIP 189
>gi|115187323|gb|ABI84246.1| polyubiquitin 10 [Arachis hypogaea]
Length = 192
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP 210
LE++ S T++ ++ + + +P
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIP 189
>gi|66802284|ref|XP_629924.1| hypothetical protein DDB_G0291928 [Dictyostelium discoideum AX4]
gi|66825263|ref|XP_645986.1| hypothetical protein DDB_G0269458 [Dictyostelium discoideum AX4]
gi|302595963|sp|P0CG80.1|UBIQI_DICDI RecName: Full=Polyubiquitin-I; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|302595964|sp|P0CG88.1|UBIQJ_DICDI RecName: Full=Polyubiquitin-J; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|60463302|gb|EAL61494.1| hypothetical protein DDB_G0291928 [Dictyostelium discoideum AX4]
gi|60474142|gb|EAL72079.1| hypothetical protein DDB_G0269458 [Dictyostelium discoideum AX4]
Length = 305
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S + ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 162 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 218
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 219 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 272
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 273 FAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|340375318|ref|XP_003386183.1| PREDICTED: polyubiquitin-like [Amphimedon queenslandica]
Length = 968
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + V +K KI+ IP Q L G +L +G + DY I E T
Sbjct: 10 GESLSLEVEASDTVESVKEKIQDKEGIPPDQQRLIFVGKQLENGRTLSDYNIQNEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTMENIKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L+ RR ++ + L G +I
Sbjct: 121 FAGRQLEDG-RTLSDYNIQKESTLHLVLR-----------RRGGMQIFVKT--LTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I +I+ D +L + ++ L++
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKILEDGRTLSDYNIQKESTLHL 221
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + IK KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 86 GKTITLEVEPSDTMENIKAKIQDKEGIPPDQQRLIFAGRQLEDGRTLSDYNIQKEST--- 142
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 ------LHLVLRRRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFL 155
F+G L+D R LS+Y I++ S + + L
Sbjct: 197 FAGKILEDG-RTLSDYNIQKESTLHLVL 223
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 111/244 (45%), Gaps = 29/244 (11%)
Query: 7 ANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTK 66
G+ V+EV + + ++KR IE I T QTL +G L D + Y I E
Sbjct: 470 VTGNIIVIEVLPTDTISDLKRMIEDKERISPTDQTLFYAGQLLDDASTLASYDIPMESV- 528
Query: 67 IDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
+DL F++S+ N + I++ + F ++V +T+ ++K KI G P + +
Sbjct: 529 LDL----FIRSNPNPNMTIYVKT-LTGKTFELNVIYCNTIGNVKTKIEETGGIPCNQQKI 583
Query: 127 FFSGIELDDEF----------RNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQT 176
+ G +L+D++ + L ++GI++ S + + L+ + Q
Sbjct: 584 IYDGRQLEDDYIEDTLLPNKIKTLFDHGIKDKSTLHLLLRLRGGM-------------QI 630
Query: 177 SSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEY 236
L G +I LE++ S T+ ++ + + +P + I +++ D+ +L + ++
Sbjct: 631 FVKTLTGRTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKVLVDDRTLSDYNIKT 690
Query: 237 GDIL 240
D +
Sbjct: 691 KDTI 694
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G L DG + DY I KE T
Sbjct: 162 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKILEDGRTLSDYNIQKESTL-- 219
Query: 69 LTINPFLQSSFNQHDKIHIIIKF-----PSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKR 123
L F +HD + I +K + + V+ ++T+ ++K KI + P +
Sbjct: 220 -----HLVLCF-RHDML-IFVKIWIGNETGKIIFLQVEPSNTIENVKAKIQDKERIPPDQ 272
Query: 124 MLLFFSGIELDDEFRNLSEYGIREFSEIIVFL 155
L F+G +L++ L +YGI+ S + + L
Sbjct: 273 QKLIFAGKQLENGHYTLLDYGIQRESTLDLLL 304
>gi|195587566|ref|XP_002083532.1| GD13313 [Drosophila simulans]
gi|194195541|gb|EDX09117.1| GD13313 [Drosophila simulans]
Length = 195
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP 210
LE++ S T+ ++ + + +P
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIP 189
>gi|402483942|gb|AFQ60003.1| polyubiquitin, partial [Solen grandis]
Length = 275
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 3 ITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST------ 56
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + ++V+ +D++ ++K KI +G P + L F+G
Sbjct: 57 ---LHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAG 113
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R LS+Y I++ S + + L RL +Q L G +I LE+
Sbjct: 114 KQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEV 159
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 160 EASDSIENVKAKIQDKEGIPPDQQRLIFAGKHLEDGRTLSDYNIQKESTLHL 211
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 75 TGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 132
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 133 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQQRL 185
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 186 IFAGKHLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 231
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S ++ ++ + + +P ++ IF KQ
Sbjct: 232 TLEVEASDSIENVKAKIQDKESIPPDQQRLIFAGKQ 267
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 94 RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIV 153
+ ++V+ +D++ ++K KI +G P + L F+G +L+D R LS+Y I++ S + +
Sbjct: 1 KTITLEVEASDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHL 59
Query: 154 FLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRED 213
L RL +Q L G +I LE++ S ++ ++ + + +P +
Sbjct: 60 VL-------------RLRGGMQIFVKTLTGKTITLEVEASDSIENVKAKIQDKEGIPPDQ 106
Query: 214 YIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 107 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 135
>gi|66811838|ref|XP_640098.1| hypothetical protein DDB_G0282369 [Dictyostelium discoideum AX4]
gi|302595961|sp|P0CG79.1|UBIQG_DICDI RecName: Full=Polyubiquitin-G; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|167949|gb|AAA33268.1| ubiquitin [Dictyostelium discoideum]
gi|60468034|gb|EAL66044.1| hypothetical protein DDB_G0282369 [Dictyostelium discoideum AX4]
Length = 381
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S + ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 238 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 294
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 295 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 348
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 349 FAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|66804955|ref|XP_636210.1| hypothetical protein DDB_G0289449 [Dictyostelium discoideum AX4]
gi|302595960|sp|P0CG78.1|UBIQF_DICDI RecName: Full=Polyubiquitin-F; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|167947|gb|AAA33267.1| ubiquitin [Dictyostelium discoideum]
gi|60464567|gb|EAL62704.1| hypothetical protein DDB_G0289449 [Dictyostelium discoideum AX4]
Length = 533
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S + ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 238 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 294
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 295 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 348
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 349 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 394
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S + ++ + + +P + I + + D +L + ++ L++
Sbjct: 395 LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 390 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 446
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 447 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 500
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 501 FAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>gi|66814762|ref|XP_641560.1| hypothetical protein DDB_G0279721 [Dictyostelium discoideum AX4]
gi|302595962|sp|P0CG81.1|UBIQH_DICDI RecName: Full=Polyubiquitin-H; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-like
gi|60469646|gb|EAL67635.1| hypothetical protein DDB_G0279721 [Dictyostelium discoideum AX4]
Length = 381
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S + ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 238 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 294
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 295 ------LHLVLRLRGGMQIFVKTLTGKTITLEVECSDNIENVKAKIQDKEGIPPDQQRLI 348
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 349 FAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|357474747|ref|XP_003607659.1| Ubiquitin [Medicago truncatula]
gi|355508714|gb|AES89856.1| Ubiquitin [Medicago truncatula]
Length = 259
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 37 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRILADYNIQKEST-- 94
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 95 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 147
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L +Y I++ S + + L RL +Q + L G +I
Sbjct: 148 IFAGKQLEDG-RTLGDYNIQKESTLHLVL-------------RLRGGMQIFVNTLTGKTI 193
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
L+++ S T+ +++ L +P + + + ++D+ +L + ++ L++
Sbjct: 194 TLDVESSDTIADVKLTLEEKVGIPLDQVRVVIAGKQLKDSYTLAHYNIQKESTLHMVLQV 253
Query: 247 VSRGGY 252
G +
Sbjct: 254 FGGGAF 259
>gi|339899350|ref|XP_003392827.1| putative polyubiquitin [Leishmania infantum JPCM5]
gi|321398786|emb|CBZ09034.1| putative polyubiquitin [Leishmania infantum JPCM5]
Length = 684
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 237 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + + +L + ++ L++
Sbjct: 394 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 449
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 465 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + + +L + ++ L++
Sbjct: 622 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 677
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 9 TGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLH 68
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
+ I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 69 ---------LLLRLRGGMQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L +E R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQL-EEGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + + +L + ++ L++
Sbjct: 166 ALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHL 221
>gi|167935|gb|AAA33261.1| ubiquitin, partial [Dictyostelium discoideum]
Length = 381
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S + ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 238 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 294
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 295 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLI 348
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L +Y I++ S + + L+
Sbjct: 349 FAGKQLED-GRTLFDYNIQKESTLHLVLR 376
>gi|66812158|ref|XP_640258.1| hypothetical protein DDB_G0282295 [Dictyostelium discoideum AX4]
gi|302595958|sp|P0CG76.1|UBIQA_DICDI RecName: Full=Polyubiquitin-A; Contains: RecName: Full=Ubiquitin;
Contains: RecName: Full=Ubiquitin-related 1; Flags:
Precursor
gi|167937|gb|AAA33262.1| ubiquitin [Dictyostelium discoideum]
gi|167951|gb|AAA33269.1| ubiquitin [Dictyostelium discoideum]
gi|60468260|gb|EAL66269.1| hypothetical protein DDB_G0282295 [Dictyostelium discoideum AX4]
Length = 381
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S + ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEGSDNIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 238 GKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 294
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 295 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDNIENVKTKIQDKEGIPPDQQRLI 348
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 349 FAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>gi|6118549|gb|AAF04147.1| ubiquitin precursor [Hevea brasiliensis]
Length = 381
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 30/225 (13%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + + V+ +DT+ ++K KI +G P +
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLGVESSDTIDNVKAKIQDKEGIPPDQQRF 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRW 231
LE++ S T++ ++ + + +P + +QR++ SLR
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPD------QQRLIFAGSSLRM 204
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G L + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGSSLRMVAPLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 317
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 318 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 375
Query: 247 VSRGGY 252
RGG+
Sbjct: 376 RLRGGF 381
>gi|118399883|ref|XP_001032265.1| Ubiquitin family protein [Tetrahymena thermophila]
gi|89286605|gb|EAR84602.1| Ubiquitin family protein [Tetrahymena thermophila SB210]
Length = 1252
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 26/245 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 1033 GKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 1089
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 1090 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLI 1143
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 1144 FAGKQLEDG-RTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIT 1189
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTV 247
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 1190 LDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL- 1248
Query: 248 SRGGY 252
RGG+
Sbjct: 1249 -RGGF 1252
>gi|357132045|ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
distachyon]
Length = 218
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV ++ + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVESRDTIDSVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L K+ I +K + ++V+ +DT+ ++K KIH +G P + L
Sbjct: 67 ------LHLVLRLRAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPP 166
F+G +L+D R L++Y I++ S + + L+ R P
Sbjct: 121 FAGKQLED-GRTLADYNIQKESTLHLVLRLRGGSRGQYP 158
>gi|27734361|gb|AAM51209.1| polyubiquitin [Cercomonas edax]
Length = 177
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 20/195 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 60 -----LHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRL 114
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR + Q L G +I
Sbjct: 115 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGSGM-------QIFVKTLTGKTI 162
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T+ ++
Sbjct: 163 TLDVESSDTIGNVKQ 177
>gi|182407854|gb|ACB87918.1| polyubiquitin 3 [Malus x domestica]
Length = 188
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 5 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 62
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 63 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 115
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 116 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQMFVKTLTGNTI 161
Query: 187 PLEMQDSSTVNELRHLLLSSKILP 210
LE++ S T++ ++ + + +P
Sbjct: 162 TLEVETSDTIDNVKDKIQDKEGIP 185
>gi|226473064|emb|CAX71218.1| polyubiquitin [Schistosoma japonicum]
Length = 194
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELR 200
LE++ S T+ ++
Sbjct: 166 TLEVEPSDTIENVK 179
>gi|378747684|gb|AFC36452.1| ubiquitin, partial [Anoectochilus roxburghii]
Length = 214
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 40 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 97
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 98 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 150
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 151 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 196
Query: 187 PLEMQDSSTVNELR 200
LE++ S T++ ++
Sbjct: 197 TLEVESSDTIDNVK 210
>gi|325302604|tpg|DAA34466.1| TPA_exp: ubiquitin [Amblyomma variegatum]
Length = 194
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 24 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 81
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 82 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 134
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 135 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 180
Query: 187 PLEMQDSSTVNELR 200
LE++ S T+ ++
Sbjct: 181 TLEVEPSDTIENVK 194
>gi|414589790|tpg|DAA40361.1| TPA: hypothetical protein ZEAMMB73_124498 [Zea mays]
Length = 185
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 96 FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDD-EFRNLSEYGIREFSEIIVF 154
F ++V DTV+ +KEK+ G P L +G L+D + + +GI E S I V
Sbjct: 13 FKMEVGYFDTVQDVKEKLQSCRGWPAAATTLLHNGAVLEDVDGGGIERHGIVEGSVIHVA 72
Query: 155 L-----------KTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
L K + R P+ L +V S G + + + + V+ LR L
Sbjct: 73 LLDGQHLQQPHDKRTEKRRGEGPVPPL--RVIVVSGCAEG-RVEMAVGARAAVSVLRAEL 129
Query: 204 LSSK------ILPRED-YIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSR 249
++ LPR+ Y FIH+Q +M ++ S WHGV GD + VF G+V R
Sbjct: 130 ERARGAGARFPLPRDGAYFFIHEQSVMDESRSFEWHGVAAGDEIVVFNGSVVR 182
>gi|290974051|ref|XP_002669760.1| polyubiquitin [Naegleria gruberi]
gi|284083311|gb|EFC37016.1| polyubiquitin [Naegleria gruberi]
Length = 274
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 114/275 (41%), Gaps = 59/275 (21%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKE----- 63
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE
Sbjct: 10 GKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69
Query: 64 -------------------------GTKIDLTINPFLQSSFNQHDKIHIIIK-------- 90
TKIDL+ L S++ +H++++
Sbjct: 70 TLTGKTITLEVESNDTIENVKYPSRSTKIDLS----LVSNWKMESTLHLVLRLRGGMQIF 125
Query: 91 ---FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIRE 147
+ ++V+ DT+ ++K KI +G P + L F+G +L+D R LS+Y I++
Sbjct: 126 VKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQK 184
Query: 148 FSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSK 207
S + + L RL +Q L G +I LE++ + T+ ++ + +
Sbjct: 185 ESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKE 231
Query: 208 ILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+P + I + + D +L + ++ L++
Sbjct: 232 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 266
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 131 GKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 187
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 188 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLI 241
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 242 FAGKQLED-GRTLSDYNIQKESTLHLVLR 269
>gi|124784679|gb|ABN14988.1| polyubiquitin [Taenia asiatica]
Length = 251
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 70 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 127
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 128 -------LHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 180
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 181 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 226
Query: 187 PLEMQDSSTVNELRHLLLSSKILP 210
LE++ S ++ ++ + + +P
Sbjct: 227 TLEVEPSDSIENVKAKIPDKEGIP 250
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 24/229 (10%)
Query: 15 EVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPF 74
EV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 1 EVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--------- 51
Query: 75 LQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIEL 133
L + I +K + ++V+ +D++ ++K KI +G P + L F+G +L
Sbjct: 52 LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQL 111
Query: 134 DDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDS 193
+D R LS+Y I++ S + + L R+ +Q L G +I LE++ S
Sbjct: 112 ED-GRTLSDYNIQKESTLHLVL-------------RMRGGMQIFVKTLTGKTITLEVEPS 157
Query: 194 STVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 158 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 206
>gi|27734371|gb|AAM51214.1| polyubiquitin [Cercomonas sp. ATCC 50316]
gi|27734373|gb|AAM51215.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 177
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 20/195 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T +
Sbjct: 2 TGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-L 60
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 61 HLVLR------LRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRL 114
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR + Q L G +I
Sbjct: 115 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGSGM-------QIFVKTLTGKTI 162
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T+ ++
Sbjct: 163 TLDVESSDTIETVKQ 177
>gi|145524136|ref|XP_001447898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415426|emb|CAK80501.1| unnamed protein product [Paramecium tetraurelia]
Length = 637
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 349 TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 406
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 407 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRL 459
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 460 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 505
Query: 187 PLEMQDSSTVNELRHLLLSSKILP 210
L+++ S T++ ++ + + +P
Sbjct: 506 TLDVEPSDTIDAVKAKIQDKEGIP 529
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 125 TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 182
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKE-KIHIIDGTPIKRML 125
L + I +K + +DV+ + T+ +L +I +G P +
Sbjct: 183 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSSTLLTLSRLQIQDKEGIPPDQQR 235
Query: 126 LFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGAS 185
L F+G +L+D R LS+Y I++ S + + L RL +Q L G +
Sbjct: 236 LIFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKT 281
Query: 186 IPLEMQDSSTVNELRHLLLSSKILP 210
I L+++ S T++ ++ + + +P
Sbjct: 282 ITLDVEPSDTIDAVKAKIQDKEGIP 306
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 98/237 (41%), Gaps = 34/237 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 425 TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 482
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 483 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRL 535
Query: 127 FFSG-IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGAS 185
F+G ++ + + I + + +F+KT L G +
Sbjct: 536 IFAGKLQHLKGIHSPLSFEIERWLRLQIFVKT-----------------------LTGKT 572
Query: 186 IPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 573 ITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 629
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 84 KIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSE 142
++ I +K + +DV+ +DT+ ++K KI +G P + L F+G +L+D R LS+
Sbjct: 560 RLQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSD 618
Query: 143 YGIREFSEIIVFLK 156
Y I++ S + + L+
Sbjct: 619 YNIQKESTLHLVLR 632
>gi|27734357|gb|AAM51207.1| polyubiquitin [Cercomonas edax]
gi|27734367|gb|AAM51212.1| polyubiquitin [Cercomonas edax]
Length = 177
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 20/195 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 60 -----LHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRL 114
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR + Q L G +I
Sbjct: 115 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGSGM-------QIFVKTLTGKTI 162
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T+ ++
Sbjct: 163 TLDVESSDTIENVKQ 177
>gi|578549|emb|CAA80335.1| ubiquitin [Tetrahymena pyriformis]
Length = 303
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + IK+KI IP+ Q L +G +L DG + DY I KE T
Sbjct: 10 GKTVALDVSSTDNIDTIKQKIYDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
+ + + +K + +DV +TD + ++K KI +G P + L
Sbjct: 67 ------VHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+DE R +S+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLEDE-RTVSDYNIQKESTLHLVL-------------RLRGGMQVFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L++ S + ++ + + +P + I + + D ++ + ++ L++
Sbjct: 167 LDIDSSDNIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTVTDYNIQKESTLHL 221
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L++ + + +K KI+ IPA Q L +G +L DG + DY I KE T
Sbjct: 162 GKTITLDIDSSDNIENVKAKIQDKEGIPADQQRLIFAGKQLEDGRTVTDYNIQKEST--- 218
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ D + +K +I +G P+ + L
Sbjct: 219 ------LHLVLRLRGGMQIFMKTLTGKTITLDVNSADNIEKVKAQIQDKEGIPVDQQRLI 272
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D + +S+Y I + S + + L+
Sbjct: 273 FAGKQLED-GKTVSDYNISKESTLNLVLR 300
>gi|773586|emb|CAA35579.1| ubiquitin [Tetrahymena pyriformis]
Length = 264
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + IK+KI+ IP+ Q L +G +L +G + DY I KE T
Sbjct: 10 GKTVTLDVASTDNIENIKQKIQDKEGIPSDQQRLIFAGKQLEEGRTVSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
+ + + +K + +DV +TD + ++K KI +G P + L
Sbjct: 67 ------VHLVLRLRGGMQVFVKTLTGKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R +S+Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQLED-GRTVSDYNIQKESTLHLVL-------------RLRGGMQVFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE+ S + ++ + + +P + I + + D ++ + ++ L++
Sbjct: 167 LEVNSSDNIESIKSKIQDKEGIPSDQQRLIFAGKQLEDGRNISDYNIQKESTLHL 221
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 24/193 (12%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + IK KI+ IP+ Q L +G +L DG + DY I KE T
Sbjct: 86 GKTITLDVAQTDNIENIKAKIQDKEGIPSDQQRLIFAGKQLEDGRTVSDYNIQKEST--- 142
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K + ++V+ +D + S+K KI +G P + L
Sbjct: 143 ------LHLVLRLRGGMQVFVKTLTGKTITLEVNSSDNIESIKSKIQDKEGIPSDQQRLI 196
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D RN+S+Y I++ S + + L RL +Q L G +I
Sbjct: 197 FAGKQLED-GRNISDYNIQKESTLHLVL-------------RLRGGMQVFVKTLTGKTIT 242
Query: 188 LEMQDSSTVNELR 200
L++ S + ++
Sbjct: 243 LDVDSSDNIENVK 255
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + IK KI+ IP+ Q L +G +L DG ++ DY I KE T
Sbjct: 162 GKTITLEVNSSDNIESIKSKIQDKEGIPSDQQRLIFAGKQLEDGRNISDYNIQKEST--- 218
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
L + + +K + +DVD +D + ++K KI +G
Sbjct: 219 ------LHLVLRLRGGMQVFVKTLTGKTITLDVDSSDNIENVKAKIQDKEG 263
>gi|27734369|gb|AAM51213.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 177
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 20/195 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 60 -----LHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRL 114
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR + Q L G +I
Sbjct: 115 IFAGRQLED-GRTLADYNIQKESTLHLVL----RLRGGSGM-------QIFVKTLTGKTI 162
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T+ ++
Sbjct: 163 TLDVESSDTIETVKQ 177
>gi|399525602|gb|AFP44113.1| ubiquitin, partial [Lycoris longituba]
Length = 187
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 12 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 69
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 70 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 122
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 123 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 168
Query: 187 PLEMQDSSTVNELR 200
LE++ S T++ ++
Sbjct: 169 TLEVEGSDTIDNVK 182
>gi|290979900|ref|XP_002672671.1| polyubiquitin [Naegleria gruberi]
gi|284086249|gb|EFC39927.1| polyubiquitin [Naegleria gruberi]
Length = 293
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 110/239 (46%), Gaps = 34/239 (14%)
Query: 4 IIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKE 63
I +GH F ++V + + +IK + + IP SQ L ++G +L DG ++DY + ++
Sbjct: 5 IKTLSGHSFPIDVECTDSIEKIKELVNEKQGIPPPSQRLILNGKKLEDGKTIQDYEMKQD 64
Query: 64 GTKIDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKR 123
T I++ + + ++V+ DT+ ++K KI +G P +
Sbjct: 65 ST-------------------IYLALSWRD-TITLEVESNDTIENVKSKIQDKEGIPPDQ 104
Query: 124 MLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNG 183
L F+G +L+D R LS+Y I++ S + + L RL +Q L G
Sbjct: 105 QRLIFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTG 150
Query: 184 ASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+I LE++ + T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 151 KTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 209
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 150 GKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 206
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 207 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLI 260
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 261 FAGKQLED-GRTLSDYNIQKESTLHLVLR 288
>gi|27734383|gb|AAM51220.1| polyubiquitin [Euglypha rotunda]
gi|27734385|gb|AAM51221.1| polyubiquitin [Euglypha rotunda]
Length = 177
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 20/195 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY + KE T
Sbjct: 2 TGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEAT-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 60 -----LHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRL 114
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y + + + + + L RLR + Q L G +I
Sbjct: 115 IFAGKQLED-GRTLSDYNVTKEATLHLVL----RLRGGSGM-------QIFVKTLTGKTI 162
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T+ ++
Sbjct: 163 TLDVEASDTIENVKQ 177
>gi|60417384|emb|CAI59819.1| ubiquitin [Nyctotherus ovalis]
Length = 208
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 24/225 (10%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
L+V + + ++K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 3 ITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST------ 56
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + +DV+ DT+ +K KI +G P + L F+G
Sbjct: 57 ---LHLVLRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAG 113
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R L++Y I++ S + + L RL +Q L G +I L++
Sbjct: 114 KQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLDV 159
Query: 191 QDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
+ + T+ +++ + + +P + I + + D +L + ++
Sbjct: 160 EPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 204
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + ++K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 75 TGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 132
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ DT+ +K KI +G P + L
Sbjct: 133 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRL 185
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
F+G +L+D R L++Y I++ S
Sbjct: 186 IFAGKQLED-GRTLADYNIQKES 207
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 94 RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIV 153
+ +DV+ DT+ +K KI +G P + L F+G +L+D R L++Y I++ S + +
Sbjct: 1 KTITLDVEPNDTIEQVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHL 59
Query: 154 FLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRED 213
L RL +Q L G +I L+++ + T+ +++ + + +P +
Sbjct: 60 VL-------------RLRGGMQIFVKTLTGKTITLDVEPNDTIEQVKAKIQDKEGIPPDQ 106
Query: 214 YIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 107 QRLIFAGKQLEDGRTLADYNIQKESTLHL 135
>gi|57282601|emb|CAD27944.1| polyubiquitin-like [Oryza sativa]
Length = 219
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELR 200
LE++ S T++ ++
Sbjct: 166 TLEVESSDTIDNVK 179
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIHQTSKRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEI 151
F+G +L+D R L++Y I++ S +
Sbjct: 196 IFAGKQLED-GRTLADYNIQKESTL 219
>gi|339233042|ref|XP_003381638.1| ubiquitin family protein [Trichinella spiralis]
gi|316979524|gb|EFV62308.1| ubiquitin family protein [Trichinella spiralis]
Length = 274
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 18 TGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 75
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 76 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRL 128
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 129 IFAGKQLED-GRMLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 174
Query: 187 PLEMQDSSTVNELRHLLLSSKILP 210
LE++ S T+ ++ + + +P
Sbjct: 175 TLEVEPSDTIENVKGKIQDKEGIP 198
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 94 TGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRMLSDYNIQKEST-- 151
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKR--- 123
L + I +K + ++V+ +DT+ ++K KI +G P +
Sbjct: 152 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRL 204
Query: 124 -----MLLFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
M + F G +L+D R L++Y I++ S + + L+
Sbjct: 205 IFAEFMCMAFIGKQLED-GRTLADYNIQKESTLHLVLR 241
>gi|339232974|ref|XP_003381604.1| ubiquitin family protein [Trichinella spiralis]
gi|316979565|gb|EFV62342.1| ubiquitin family protein [Trichinella spiralis]
Length = 210
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP 210
LE++ S T+ ++ + + +P
Sbjct: 166 TLEVEPSDTIENVKGKIQDKEGIP 189
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRL 195
Query: 127 FFSGIEL 133
F+GIEL
Sbjct: 196 IFAGIEL 202
>gi|197129052|gb|ACH45550.1| putative ubiquitin C variant 1 [Taeniopygia guttata]
Length = 245
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 24/229 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + D I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDDNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
LE++ S T+ ++ + + +P + I + + D +L + ++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 214
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIRE 147
F+G +L+D R LS+Y I++
Sbjct: 196 IFAGKQLED-GRTLSDYNIQK 215
>gi|343485961|dbj|BAK61738.1| ubiquitin [Larcopyle butschlii]
Length = 188
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELR 200
L+++ S T++ ++
Sbjct: 166 TLDVESSDTISNVK 179
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLDVESSDTISNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
L + I +K + +DV+ +DT+ ++K KI +G
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTISNVKAKIQDKEG 187
>gi|27734306|gb|AAM50044.1| polyubiquitin 7 [Cercomonas sp. ATCC 50316]
Length = 177
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 20/195 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLDVESSDTIETVKQKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 60 -----LHLVLRLRGGSAMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRL 114
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR + Q L G +I
Sbjct: 115 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGSGM-------QIFVKTLTGKTI 162
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T+ ++
Sbjct: 163 TLDVESSDTIETVKQ 177
>gi|197129059|gb|ACH45557.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
Length = 190
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTV 196
LE++ S T+
Sbjct: 166 TLEVEPSDTI 175
>gi|402586659|gb|EJW80596.1| polyubiquitin, partial [Wuchereria bancrofti]
Length = 198
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 4 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQIFVKTLT 54
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S +
Sbjct: 55 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLH 113
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRE 212
+ L RL +Q L G +I LE++ S T+ ++ + + +P +
Sbjct: 114 LVL-------------RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPD 160
Query: 213 DYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRGGY 252
I + + D +L + ++ L++ RGGY
Sbjct: 161 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--LRLRGGY 198
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 54 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 111
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 112 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 164
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 165 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 193
>gi|27734377|gb|AAM51217.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 177
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 20/195 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLDVESSDMIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 60 -----LHLVLRLRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRL 114
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR + Q L G +I
Sbjct: 115 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGSGM-------QIFVKTLTGKTI 162
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T+ ++
Sbjct: 163 TLDVESSDTIETVKQ 177
>gi|342186084|emb|CCC95569.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 961
Score = 63.2 bits (152), Expect = 9e-08, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 10 GKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L +E R L++Y I++ S + + L RL +Q L G +I
Sbjct: 121 FAGKQL-EEGRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIA 166
Query: 188 LEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 167 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 201
Score = 63.2 bits (152), Expect = 9e-08, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 238 GKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST--- 294
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 ------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L +E R L++Y I++ S + + L RL +Q L G +I
Sbjct: 349 FAGKQL-EEGRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIA 394
Query: 188 LEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 395 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 429
Score = 63.2 bits (152), Expect = 9e-08, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 466 GKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST--- 522
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 ------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLI 576
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L +E R L++Y I++ S + + L RL +Q L G +I
Sbjct: 577 FAGKQL-EEGRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIA 622
Query: 188 LEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 623 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 657
Score = 63.2 bits (152), Expect = 9e-08, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 694 GKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST--- 750
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 ------LHLVLRLRGGMQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLI 804
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L +E R L++Y I++ S + + L RL +Q L G +I
Sbjct: 805 FAGKQL-EEGRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTIA 850
Query: 188 LEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
LE++ S T+ ++ + + +P ++ IF KQ
Sbjct: 851 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 885
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L +G + DY I KE T
Sbjct: 846 GKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKEST--- 902
Query: 69 LTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFF 128
L + I +K + + + +DT+R++K KI +G P + L F
Sbjct: 903 ------LHLVLRLRGGMQIFVKTLPGRPCFEGEASDTMRNVKAKIQDKEGIPPDQQRLIF 956
>gi|254540256|gb|ACT66230.1| polyubiquitin protein [Piriformospora indica]
Length = 196
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 4 ITLEVESSDTMDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST------ 57
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 58 ---LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAG 114
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R LS+Y I++ S + + L RL +Q L G +I LE+
Sbjct: 115 KQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEV 160
Query: 191 QDSSTVNELRHLLLSSKILP 210
+ S T++ ++ + + +P
Sbjct: 161 ESSDTIDNVKTKIQDKEGIP 180
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+R ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S +
Sbjct: 1 ARGITLEVESSDTMDNVKTKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLH 59
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRE 212
+ L RL +Q L G +I LE++ S T++ ++ + + +P +
Sbjct: 60 LVL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPD 106
Query: 213 DYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ L++
Sbjct: 107 QQRLIFAGKQLEDGRTLSDYNIQKESTLHL 136
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 76 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 133
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 134 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 186
Query: 127 FFSG 130
F+G
Sbjct: 187 IFAG 190
>gi|27734387|gb|AAM51222.1| polyubiquitin [Euglypha rotunda]
Length = 177
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 20/195 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY + KE T
Sbjct: 2 TGKTITLDVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNVTKEAT-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 60 -----LHLVLRLRGGSGMQIFVKTLTGKTITLDVEASDTIENVKQKIQDKEGIPPDQQRL 114
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y + + + + + L RLR + Q L G +I
Sbjct: 115 IFAGKQLED-GRTLSDYNVTKEATLHLVL----RLRGGSGM-------QIFVKTLTGKTI 162
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T+ ++
Sbjct: 163 TLDVEASDTIENVKQ 177
>gi|15234664|ref|NP_192432.1| ubiquitin family protein [Arabidopsis thaliana]
gi|7267283|emb|CAB81065.1| putative protein [Arabidopsis thaliana]
gi|332657093|gb|AEE82493.1| ubiquitin family protein [Arabidopsis thaliana]
Length = 206
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 44/196 (22%)
Query: 96 FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFL 155
F I++ DTV +K+KI P+ + L F G L D ++ + I S I + +
Sbjct: 13 FEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHL-DIEQCVILNHSRIQLSI 71
Query: 156 KTMNRLRDNPPIRRLSFKVQTSSS--LLNGA----------------------------- 184
+ ++ R+N + + Q++S+ NG
Sbjct: 72 SSPDQSRNNIQVFKTEQFPQSNSTEQTSNGHHESTVMIPMSNNNNNNNPKKLRVMVLPKS 131
Query: 185 ---SIPLEMQDSSTVNELRHLLLSSKI-------LPREDYIFIHKQRIMRDNCSLRWHGV 234
IP+++ V ELR L +KI LP+E Y FI+KQ +M +N S RWH V
Sbjct: 132 GTRKIPVDVNAGDNVGELRKEL--AKIQQRFQLSLPQEGYFFIYKQNVMDENRSFRWHRV 189
Query: 235 EYGDILYVFKGTVSRG 250
+ GD + +F G+VS G
Sbjct: 190 DQGDTIEIFNGSVSGG 205
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
+G F +E+G + VLEIK+KIE+ IP + QTL G L D LD+E I+ ++I
Sbjct: 9 SGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVILNH-SRI 67
Query: 68 DLTINPFLQSSFN 80
L+I+ QS N
Sbjct: 68 QLSISSPDQSRNN 80
>gi|444791|prf||1908225A ubiquitin
Length = 305
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI + P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKECIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L +Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLFDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>gi|27734379|gb|AAM51218.1| polyubiquitin [Cercomonas sp. ATCC 50316]
Length = 177
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 20/195 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+ + + +K+KI+ IP Q L +G +L DG + DY I KE T +
Sbjct: 2 TGKTITLDAESSDTIETVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-L 60
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 61 HLVLR------LRGGSGMQIFVKTLTGKTITLDVESSDTIETVKQKIQDKEGIPPDQQRL 114
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR + Q L G +I
Sbjct: 115 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGSGM-------QIFVKTLTGKTI 162
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T+ ++
Sbjct: 163 TLDVESSDTIETVKQ 177
>gi|310693627|gb|ADP05114.1| polyubiquitin 10 [Aponogeton madagascariensis]
Length = 221
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 3 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 60
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K ++V+ +DT+ ++K KI +G P + L
Sbjct: 61 -------LHLVLRLRGGMQIFVKTLTGETTTLEVESSDTIDNVKAKIQDKEGIPPDQQRL 113
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 114 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 159
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 160 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 215
>gi|340709503|ref|XP_003393346.1| PREDICTED: polyubiquitin-B-like isoform 1 [Bombus terrestris]
gi|340709505|ref|XP_003393347.1| PREDICTED: polyubiquitin-B-like isoform 2 [Bombus terrestris]
Length = 157
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTK- 66
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTSH 68
Query: 67 IDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
+ L + +Q S + + ++VD DT+ ++K KIH +G P + L
Sbjct: 69 LVLRLRGGMQIS---------VKTLTGKAITLEVDVPDTIENVKAKIHEKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|14250448|gb|AAH08661.1| Ubc protein [Mus musculus]
Length = 202
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRH 201
L+++ S T +++
Sbjct: 166 TLDVEPSVTTKKVKQ 180
>gi|312380774|gb|EFR26677.1| hypothetical protein AND_07080 [Anopheles darlingi]
Length = 567
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 107/242 (44%), Gaps = 35/242 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G ++ + V +K++I++ IP Q + +G +L DG +E+Y I+K
Sbjct: 85 TGKTIAIDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQLEDGRTLEEYSIIK----- 139
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
+ I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 140 --------------ATNMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 185
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 186 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 231
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILY-VFKG 245
LE++ S T+ ++ + + +P + I + + D +L + ++ L+ V G
Sbjct: 232 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLPG 291
Query: 246 TV 247
+
Sbjct: 292 AI 293
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 105/236 (44%), Gaps = 34/236 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V E VL+IK KIE+ I Q + +G +L +G + DY I + G+ +
Sbjct: 9 TGKTITLDVVPTETVLDIKSKIEEREGIDPDQQRIIFAGKQLENGRIISDYNI-QHGSTM 67
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + L+ + I ++ + ID + TV S+K++I + P + +
Sbjct: 68 HLVLR--LKGG------MQIFVRMLTGKTIAIDTEPEATVESVKKQIDEREEIPPNQQRM 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L EY I + + + +F+KT L G +I
Sbjct: 120 IFAGKQLED-GRTLEEYSIIKATNMQIFVKT-----------------------LTGKTI 155
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 156 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 211
>gi|218196369|gb|EEC78796.1| hypothetical protein OsI_19051 [Oryza sativa Indica Group]
Length = 278
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 28/269 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G F +E+ V IK + + IP SQ L +G EL D D E Y I++ T +
Sbjct: 10 GRWFTVEIWFFSTVRRIKEYVLRQEGIPVESQRLFFAGAELDDDGDTERYSILQGSTVLL 69
Query: 69 L---------TINPFLQSSFNQHDKIHIIIKFPSR------KFNIDVDRTD-TVRSLKEK 112
L + + +++ P+ ++VD TV LKE+
Sbjct: 70 LLPEDGAAPPSSGGGGGGGGGTKAMVRVVVNAPAALAGKGGAVTVEVDAAACTVAGLKER 129
Query: 113 IH-IIDGT-PIKRMLLFFSGIELDDEFRNLSEY----GIREFSEIIVFLKTMNRLRDNPP 166
+ DG P R+ L F +E++D R ++EY + + +V + P
Sbjct: 130 VQEGTDGALPAARVALMFGKVEMEDG-RAVAEYVPPGAAADGTATVVVSAVVRPPPPPTP 188
Query: 167 IRRLSFKVQTSSSLLNGA-SIPLEMQDSSTVNELRHLLLSSKI---LPRED-YIFIHKQR 221
+ + + + ++ GA + +E+ D V +LR L + LP++ Y FI+KQ
Sbjct: 189 TPQPPQQPRVTVNVKWGAKAAAVEVSDMLAVKDLRAELGGAAAHLPLPKDGGYFFIYKQN 248
Query: 222 IMRDNCSLRWHGVEYGDILYVFKGTVSRG 250
+M ++ +LRWH V+ GD + +F G V+ G
Sbjct: 249 VMEEDRTLRWHDVKNGDTIEIFNGRVTGG 277
>gi|339232978|ref|XP_003381606.1| ubiquitin family protein [Trichinella spiralis]
gi|316979561|gb|EFV62340.1| ubiquitin family protein [Trichinella spiralis]
Length = 315
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 24/219 (10%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 16 VKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGG 66
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 67 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDY 125
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I LE++ S TV ++ +
Sbjct: 126 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVEPSDTVENVKGKI 172
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + D+ +L + ++ L++
Sbjct: 173 QDKEGIPPDQQRLIFAGKQLEDSRTLSDYNIQKESTLHL 211
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 75 TGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 132
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DTV ++K KI +G P + L
Sbjct: 133 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQRL 185
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 186 IFAGKQLEDS-RTLSDYNIQKESTLHLVLR 214
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 100 VDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMN 159
V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S + + L
Sbjct: 7 VEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVL---- 61
Query: 160 RLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHK 219
RL +Q L G +I LE++ S T+ ++ + + +P + I
Sbjct: 62 ---------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFA 112
Query: 220 QRIMRDNCSLRWHGVEYGDILYV 242
+ + D +L + ++ L++
Sbjct: 113 GKQLEDGRTLSDYNIQKESTLHL 135
>gi|1107481|emb|CAA60629.1| unnamed protein product [Acanthamoeba sp. 4b3]
Length = 172
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 24/187 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDS 193
LE++ S
Sbjct: 166 TLEVESS 172
>gi|18398638|ref|NP_566357.1| polyubiquitin 8 [Arabidopsis thaliana]
gi|75101960|sp|Q39256.1|UBQ8_ARATH RecName: Full=Polyubiquitin 8; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Contains: RecName:
Full=Ubiquitin-related 4; Contains: RecName:
Full=Ubiquitin-related 5; Contains: RecName:
Full=Ubiquitin-related 6; Contains: RecName:
Full=Ubiquitin-related 7; Contains: RecName:
Full=Ubiquitin-related 8; Flags: Precursor
gi|6681339|gb|AAF23256.1|AC015985_14 polyubiquitin (ubq8) [Arabidopsis thaliana]
gi|6682255|gb|AAF23307.1|AC016661_32 polyubiquitin [Arabidopsis thaliana]
gi|870794|gb|AAA68879.1| polyubiquitin [Arabidopsis thaliana]
gi|332641292|gb|AEE74813.1| polyubiquitin 8 [Arabidopsis thaliana]
Length = 631
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 20/240 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-K 66
G LEV + + +K KI+ I Q L +G +L DG + DY I KE T
Sbjct: 87 TGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLH 146
Query: 67 IDLTINPFLQ---SSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKR 123
+ L + +Q S+F+ + F S + V+ +DT+ ++K KI +G
Sbjct: 147 LVLRLCGGMQIFVSTFSGKN-------FTSDTLTLKVESSDTIENVKAKIQDREGLRPDH 199
Query: 124 MLLFFSGIEL-DDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLN 182
L F G EL ++ R L++YGIR S + + L RLR + I F +
Sbjct: 200 QRLIFHGEELFTEDNRTLADYGIRNRSTLCLAL----RLRGDMYI----FVKNLPYNSFT 251
Query: 183 GASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
G + LE++ S T++ ++ L + +P + + I + + +L + ++ G LY+
Sbjct: 252 GENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYL 311
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 40 QTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNI 98
Q L G EL DG + DY I KE T + L + + I +K F + +
Sbjct: 361 QRLIFLGKELKDGCTLADYSIQKEST-LHLVLG------------MQIFVKLFGGKIITL 407
Query: 99 DVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTM 158
+V +DT++S+K KI G+P + +L F G +L D R L +Y IR S + +F
Sbjct: 408 EVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDG-RTLGDYNIRNESTLHLFFHIR 466
Query: 159 NRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIH 218
+ ++ ++ SF +T + +I LE++ S T++ ++ + +P + I
Sbjct: 467 HGMQ--IFVKTFSFSGETPTC----KTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIF 520
Query: 219 KQRIMRDNCSLRWHGVEYGDILYVFKGTVSRGG 251
R++ + +L + ++ G ++ + RGG
Sbjct: 521 GGRVLVGSRTLLDYNIQKGSTIHQL--FLQRGG 551
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 22/189 (11%)
Query: 13 VLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTIN 72
L+V + + +K KI+ IP Q L +G +L DGL + DY I KE T
Sbjct: 16 TLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKEST------- 68
Query: 73 PFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGI 131
L + I ++ + ++V +DT+ ++K KI +G ++ L F+G
Sbjct: 69 --LHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGK 126
Query: 132 ELDDEFRNLSEYGIREFSEIIVFLKTMNRLR--------DNPPIRRLSFKVQTSSSLLNG 183
+L+D R L++Y I++ S + + L+ ++ N L+ KV++S ++ N
Sbjct: 127 QLEDG-RTLADYNIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIEN- 184
Query: 184 ASIPLEMQD 192
+ ++QD
Sbjct: 185 --VKAKIQD 191
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 13 VLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTIN 72
LEV + + +K KI+ IP Q L G LV + DY I K T
Sbjct: 489 TLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGST------- 541
Query: 73 PFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG-TPIKRMLLFFSG 130
+ F Q + I IK + ++V+ +DT+ ++KEKI + +G P ++ML+FF G
Sbjct: 542 --IHQLFLQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFF-G 598
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRD 163
+L+D L +Y I + S + + L+ R D
Sbjct: 599 QQLEDGV-TLGDYDIHKKSTLYLVLRLRQRRYD 630
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 91 FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSE 150
+ +DV+ +D++ ++K KI +G P+ + L F+G +L+D L++Y I++ S
Sbjct: 10 LTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGL-TLADYNIQKEST 68
Query: 151 IIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSK-IL 209
+ + L RLR I VQT L G +I LE++ S T++ ++ + + IL
Sbjct: 69 LHLVL----RLRGGMQIF-----VQT----LTGKTITLEVKSSDTIDNVKAKIQDKEGIL 115
Query: 210 PRED-YIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
PR+ IF KQ + D +L + ++ L++
Sbjct: 116 PRQQRLIFAGKQ--LEDGRTLADYNIQKESTLHL 147
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 100/245 (40%), Gaps = 35/245 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ P Q L G +L DG + DY I E T
Sbjct: 401 GGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNEST-- 458
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPS--------RKFNIDVDRTDTVRSLKEKIHIIDGT 119
L F+ + I +K S + ++V+ +DT+ ++K KI G
Sbjct: 459 -------LHLFFHIRHGMQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGI 511
Query: 120 PIKRMLLFFSGIELDDEFRNLSEYGIREFSEI-IVFLKTMNRLRDNPPIRRLSFKVQTSS 178
P+ R L F G L R L +Y I++ S I +FL+ +Q
Sbjct: 512 PLDRQRLIFGGRVLVGS-RTLLDYNIQKGSTIHQLFLQRGG--------------MQIFI 556
Query: 179 SLLNGASIPLEMQDSSTVNELRH-LLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYG 237
L G +I LE++ S T+ ++ + + I P + + Q+ + D +L + +
Sbjct: 557 KTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQ-LEDGVTLGDYDIHKK 615
Query: 238 DILYV 242
LY+
Sbjct: 616 STLYL 620
>gi|82568440|dbj|BAE48510.1| polyubiquitin [Raphidiophrys contractilis]
Length = 173
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 60 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRL 112
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 113 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 158
Query: 187 PLEMQDSSTVNELR 200
LE++ S ++ ++
Sbjct: 159 TLEVESSDSIENVK 172
>gi|578551|emb|CAA80337.1| ubiquitin [Tetrahymena pyriformis]
Length = 379
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 86 GKTITLEVDSSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTISDYNIQKEST--- 142
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L I++ +K + +DV+ DT+ +K KI +G P + L
Sbjct: 143 ------LHLVLRLRGGIYLFVKTLTGKTITLDVEYNDTIEKVKAKIQDKEGIPPDQQRLI 196
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R +S+Y +++ S + + L RL +Q L G +I
Sbjct: 197 FAGKQLED-GRTVSDYNLQKDSTLHLVL-------------RLRGGMQVFIKTLTGKTIT 242
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L++ S + ++ + + +P + I + + D ++ + ++ L++
Sbjct: 243 LDVDSSENIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKESTLHL 297
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + V IK+KI+ IP Q L +G +L D + DY I KE T
Sbjct: 10 GKTVTLDVAQTDSVENIKQKIQDKEGIPPDQQRLIFAGKQLEDARTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++VD +D + ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVDSSDNIENVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R +S+Y I++ S + + L RLR + V+T L G +I
Sbjct: 121 FAGKQLED-GRTISDYNIQKESTLHLVL----RLRGG-----IYLFVKT----LTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQ 220
L+++ + T+ +++ + + +P ++ IF KQ
Sbjct: 167 LDVEYNDTIEKVKAKIQDKEGIPPDQQRLIFAGKQ 201
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V E + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 238 GKTITLDVDSSENIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTVSDYNIQKEST--- 294
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ TD + ++K KI +G P + L
Sbjct: 295 ------LHLVLRLRGGMQIFVKTLTGKTITLDVNSTDNIENVKAKIQDKEGIPPDQQRLI 348
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R+LS+Y I + S + + L+
Sbjct: 349 FAGKQLED-GRSLSDYNISKESTLHLVLR 376
>gi|326526143|dbj|BAJ93248.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 13 VLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTIN 72
LEV + ++K KI++ IPA Q L LVD +EDY I +E T + L +
Sbjct: 32 TLEVMGSNTIYDVKDKIQEKEGIPAGEQRLMFGSELLVDSCSLEDYSIEEEST-LTLDLV 90
Query: 73 PFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGI 131
P +HI I+ S K I V+ D++ S+K K G P R LFF+G
Sbjct: 91 P---------RGMHIFIRTRSGKTMTIGVEGEDSLYSVKAKFFDETGIPPSRQRLFFAGK 141
Query: 132 ELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQ 191
+L+D R L++Y ++ S + V L+ + R R+S K T ++ A M+
Sbjct: 142 QLED-GRTLADYDVQNESTLHVVLRGITRQSGE---MRISVKTVTGKKVIEHA-----MK 192
Query: 192 DSSTVNELRHLLLSS-KILPREDYI 215
++ ++ + S ILP E +
Sbjct: 193 RRQAIDNIKAWIYSELCILPEEQQL 217
>gi|324532777|gb|ADY49258.1| Polyubiquitin, partial [Ascaris suum]
Length = 187
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D V+ +K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTLTLEVEPSDAVQHVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNP---PIRRLSFKVQTSSSL--- 180
F+G +L+D+ R LS+Y I++ S + + L+ +R + R ++ +V++S S+
Sbjct: 120 IFAGKQLEDD-RTLSDYNIQKESTLHLVLRLRGGVRVSANAFACRDVTPQVESSDSVKKG 178
Query: 181 -LNGAS 185
L GAS
Sbjct: 179 ELEGAS 184
>gi|149391359|gb|ABR25697.1| polyubiquitin containing 7 ubiquitin monomers [Oryza sativa Indica
Group]
Length = 201
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 28 KIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHI 87
KI+ IP Q L +G +L DG + DY I KE T L + I
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLXDYNIQKEST---------LHLVLRLRGGMQI 51
Query: 88 IIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIR 146
+K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I+
Sbjct: 52 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQ 110
Query: 147 EFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSS 206
+ S + + L RL +Q L G +I LE++ S T++ ++ +
Sbjct: 111 KESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 157
Query: 207 KILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + D +L + ++ L++
Sbjct: 158 EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 193
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 57 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 114
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 115 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 167
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 168 IFAGKQLED-GRTLADYNIQKESTLHLVLR 196
>gi|440789929|gb|ELR11220.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 224
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSF 172
F+G +L+D R L++Y I++ S + + L RLR + F
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGGKKTKCCF 160
>gi|145524134|ref|XP_001447897.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415425|emb|CAK80500.1| unnamed protein product [Paramecium tetraurelia]
Length = 358
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 28/236 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-K 66
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 58 TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 117
Query: 67 IDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
+ L + + ++ H +DV+ +DT+ ++K KI +G P + L
Sbjct: 118 LVLRLRGGILLTWKNHAA-------------LDVEPSDTIDAVKAKIQDKEGIPPDQQRL 164
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 165 IFAGKQLEDG-RTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 210
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 211 TLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 266
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 28 KIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHI 87
KI+ IP Q L +G +L DG + DY I KE T L + I
Sbjct: 2 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQI 52
Query: 88 IIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIR 146
+K + +DV+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I+
Sbjct: 53 FVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQ 111
Query: 147 EFSEIIVFLK 156
+ S + + L+
Sbjct: 112 KESTLHLVLR 121
>gi|37542506|gb|AAL25813.1| polyubiquitin, partial [Prunus avium]
Length = 154
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 67
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +GTP + L
Sbjct: 68 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTPPDQQRL 120
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I+E S + + L+
Sbjct: 121 IFAGKQLED-GRTLADYNIQEESTLHLVLR 149
>gi|2209091|gb|AAB61405.1| ubiquitin [Tetrahymena vorax]
Length = 153
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG+ + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGITLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|443900281|dbj|GAC77607.1| ubiquitin and ubiquitin-like proteins [Pseudozyma antarctica T-34]
Length = 228
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 28/200 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RLR R NGA
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGGAKKR-----------CQNGAGT 163
Query: 187 PLEMQDSST--VNELRHLLL 204
+ +D++ V E H L
Sbjct: 164 ESQCKDAAINLVGECPHCSL 183
>gi|18405196|ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana]
gi|122213849|sp|Q3E7K8.1|UBQ12_ARATH RecName: Full=Polyubiquitin 12; Contains: RecName:
Full=Ubiquitin-related 1; Contains: RecName:
Full=Ubiquitin-related 2; Contains: RecName:
Full=Ubiquitin-related 3; Flags: Precursor
gi|332195060|gb|AEE33181.1| polyubiquitin 12 [Arabidopsis thaliana]
Length = 230
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 24/194 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G VLEV + + +K KI+ I IP L +G +L DG + DY + +
Sbjct: 9 TGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQE----- 63
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
D T++ L+ + I +K + ++V+ +DT+ +LK KI +G P + L
Sbjct: 64 DSTLHLLLRFRGG----MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELR 200
LE++ S T++ ++
Sbjct: 166 TLEVESSDTIDNVK 179
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G + +D R L++Y I++ S + + L+
Sbjct: 196 IFAGKQHED-GRTLADYNIQKESTLHLVLR 224
>gi|346321308|gb|EGX90907.1| RING and UBP finger domain protein [Cordyceps militaris CM01]
Length = 776
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T L + I +K + ++V+ +DT+ ++K KI +G
Sbjct: 61 IQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEG 111
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVF 154
P + L F+G +L+D R LS+Y I++ S + ++
Sbjct: 112 IPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLY 146
>gi|182407850|gb|ACB87916.1| polyubiquitin 1 [Malus x domestica]
Length = 208
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGESITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R+L++Y I++ S + + L RLR I S L G +I
Sbjct: 120 IFAGKQLED-GRSLADYNIQKESTLHLVL----RLRGGMHIFVKS---------LTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP 210
LE++ S T++ ++ + + +P
Sbjct: 166 TLEVESSETIDNVQAKIQDKEGIP 189
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 10/124 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGESITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L +HI +K + ++V+ ++T+ +++ KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMHIFVKSLTGKTITLEVESSETIDNVQAKIQDKEGIPPDQQRL 195
Query: 127 FFSG 130
F+G
Sbjct: 196 IFAG 199
>gi|223646258|gb|ACN09887.1| Ubiquitin [Salmo salar]
gi|223672105|gb|ACN12234.1| Ubiquitin [Salmo salar]
Length = 191
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 47 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 104
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 105 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 157
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNP 165
F+G +L+D R LS+Y I++ S + + L RLR P
Sbjct: 158 IFAGKQLEDG-RTLSDYNIQKESTLHLVL----RLRGGP 191
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 89 IKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREF 148
+ + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++
Sbjct: 44 LSLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKE 102
Query: 149 SEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKI 208
S + + L RL +Q L G +I LE++ S T+ ++ + +
Sbjct: 103 STLHLVL-------------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG 149
Query: 209 LPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+P + I + + D +L + ++ L++
Sbjct: 150 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 183
>gi|567767|gb|AAA53067.1| p125 protein, partial [Bovine viral diarrhea virus 1]
Length = 1054
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 355 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 412
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 413 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 465
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPP 166
F+G +L+D R LS+Y I++ S + + L RLR P
Sbjct: 466 IFAGKQLEDG-RTLSDYNIQKESTLHLVL----RLRGGGP 500
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 21 PVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFN 80
P+L K K+ + N+ A L GW L KE T L
Sbjct: 303 PILATKMKLLMVGNLGAEIGDLEHLGWVL-----------RKEST---------LHLVLR 342
Query: 81 QHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRN 139
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R
Sbjct: 343 LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RT 401
Query: 140 LSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNEL 199
LS+Y I++ S + + L RL +Q L G +I LE++ S T+ +
Sbjct: 402 LSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVEPSDTIENV 448
Query: 200 RHLLLSSKILP--REDYIFIHKQ 220
+ + + +P ++ IF KQ
Sbjct: 449 KAKIQDKEGIPPDQQRLIFAGKQ 471
>gi|270300599|gb|ACZ69386.1| polyubiquitin UBQ14 [Cucumis sativus]
Length = 197
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 3 GIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGGMQIFVKTLT 53
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S +
Sbjct: 54 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLH 112
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRE 212
+ L RL +Q L G +I LE++ S T++ ++ + + +P +
Sbjct: 113 LVL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD 159
Query: 213 DYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRGGY 252
I + + D +L + ++ L++ RGG+
Sbjct: 160 QQRLIFAGKQLEDGRTLADYNIQKESTLHLV--LRLRGGF 197
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 53 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 110
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 111 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 163
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 164 IFAGKQLED-GRTLADYNIQKESTLHLVLR 192
>gi|28436476|gb|AAO43305.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 25/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 29 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 86
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 87 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 139
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++ +E + +V RL +Q L G +I
Sbjct: 140 IFAGKQLED-GRTLADNIQKESTLHLVL--------------RLRGGMQIFVKTLTGKTI 184
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 185 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 240
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 180 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 237
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ + T+ ++K KI +G P + L
Sbjct: 238 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRL 290
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 291 IFAGKQLED-GRTLADYNIQKESTLHLVLR 319
>gi|5523979|gb|AAD44042.1|AF104025_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 432
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 232 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 289
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 290 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 342
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPP 166
F+G +L+D R LS+Y I++ S + + L RLR P
Sbjct: 343 IFAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGGGP 377
>gi|123445177|ref|XP_001311351.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121893157|gb|EAX98421.1| polyubiquitin, putative [Trichomonas vaginalis G3]
Length = 229
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++K KI+ IP Q L +G +L DG ++DY I K+ T
Sbjct: 9 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ TD + +K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D L +Y I++ S + + L RL +Q L G I
Sbjct: 120 IFAGKQLED-GNTLQDYSIQKDSTLHLVL-------------RLRGGMQIFVKTLTGKHI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ + + +++ + + +P + I + + D +L+ + ++ L++
Sbjct: 166 TLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>gi|384495224|gb|EIE85715.1| polyubiquitin [Rhizopus delemar RA 99-880]
Length = 230
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|242096750|ref|XP_002438865.1| hypothetical protein SORBIDRAFT_10g027480 [Sorghum bicolor]
gi|241917088|gb|EER90232.1| hypothetical protein SORBIDRAFT_10g027480 [Sorghum bicolor]
Length = 292
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 111/290 (38%), Gaps = 54/290 (18%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSG-----------WELVDGLDME 56
G EF +EV V E+K + IP SQ L ++G EL D D
Sbjct: 9 GGREFTVEVWYFATVREMKEAVHAREGIPVASQRLFLAGREGKAAEEDDQQELDDARDTA 68
Query: 57 DYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-----------------FPSRKFNID 99
Y IV EG+++ L + R +D
Sbjct: 69 HYGIV-EGSRVVLVLPDDAPPPSPSPSPSPSPSPANANAAVVRVAVSAPEIIGPRGIALD 127
Query: 100 -VDRTDTVRSLKEKIHI-IDGT-PIKRMLLFFSGIELDDEFRNLSEYG------------ 144
V +DTV LKE + DG P R LF E++D + L++YG
Sbjct: 128 EVPASDTVARLKELLQDRTDGALPAARTALFLDKAEMED-GKTLADYGPPADGGMDVSAV 186
Query: 145 IREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELR---- 200
+R + + +R+ V+ + ++ LE+ V +LR
Sbjct: 187 VRPQAPVASGGGGGGNGGGARNQQRIEVSVKFGET-----AVALEVGAMDVVRDLRKEVE 241
Query: 201 HLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRG 250
L L + + Y F++KQ +M D+ +LRWH V+ GD + +F GTV+ G
Sbjct: 242 RLCLPVRDVGGGGYFFVYKQNVMDDDRTLRWHEVKNGDTIEIFNGTVTGG 291
>gi|28436472|gb|AAO43303.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 25/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 29 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 86
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 87 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 139
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++ +E + +V RL +Q L G +I
Sbjct: 140 IFAGKQLED-GRTLADNIQKESTLHLVL--------------RLRGGMQIFVKTLTGKTI 184
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 185 TLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 240
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 180 TGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 237
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ + T+ ++K KI +G P + L
Sbjct: 238 -------LHLVLRLRGGMQIFVKNLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRL 290
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 291 IFAGKQLED-GRTLADYNIQKESTLHLVLR 319
>gi|28436474|gb|AAO43304.1| putative polyubiquitin [Arabidopsis thaliana]
Length = 325
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 25/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 29 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 86
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 87 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 139
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++ +E + +V RL +Q L G +I
Sbjct: 140 IFAGKQLED-GRTLADNIQKESTLHLVL--------------RLRGGMQIFVKTLTGKTI 184
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 185 TLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 240
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 180 TGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 237
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ + T+ ++K KI +G P + L
Sbjct: 238 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRL 290
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 291 IFAGKQLED-GRTLADYNIQKESTLHLVLR 319
>gi|388857763|emb|CCF48657.1| probable polyubiquitin [Ustilago hordei]
Length = 228
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 28/200 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RLR R NGA
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGGAKKR-----------CQNGAGT 163
Query: 187 PLEMQDSST--VNELRHLLL 204
+ +D++ V E H L
Sbjct: 164 DGQCKDAAINLVGECPHCSL 183
>gi|384497521|gb|EIE88012.1| polyubiquitin [Rhizopus delemar RA 99-880]
Length = 231
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVESSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|294942504|ref|XP_002783557.1| Ubiquitin D, putative [Perkinsus marinus ATCC 50983]
gi|239896054|gb|EER15353.1| Ubiquitin D, putative [Perkinsus marinus ATCC 50983]
Length = 163
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|71020945|ref|XP_760703.1| hypothetical protein UM04556.1 [Ustilago maydis 521]
gi|46100297|gb|EAK85530.1| hypothetical protein UM04556.1 [Ustilago maydis 521]
Length = 286
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 28/200 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 67 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 124
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 125 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 177
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RLR R NGA
Sbjct: 178 IFAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGGAKKR-----------CQNGAGT 221
Query: 187 PLEMQDSST--VNELRHLLL 204
+ +D++ V E H L
Sbjct: 222 DGQCKDAAINLVGECPHCSL 241
>gi|357154787|ref|XP_003576901.1| PREDICTED: polyubiquitin-C-like [Brachypodium distachyon]
Length = 226
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 90/222 (40%), Gaps = 70/222 (31%)
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
R+F I++ TVR +KE + G P++ LFF+ EL+D+ + Y I S ++
Sbjct: 10 GRRFEIEIWFLSTVRRMKEYVREEAGIPVESQRLFFNNSELEDDL-DTQHYAIAHGSHVL 68
Query: 153 VFL---------------KTMNRL-----RDNPP-------------------------- 166
+ L + +N+ +D+PP
Sbjct: 69 IVLPDSAAPSPGAAAIDKQQINQAAAEMDQDDPPEGEGTEVRDRAVIRQPPAANPVAAAA 128
Query: 167 ----------------IRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILP 210
I R+S +V+ G S +E+ ++ V ELR L +
Sbjct: 129 KVVLCGGAGNKQQGQQIGRMSVEVK-----WGGRSATVEVGEADAVKELRAELDGQLLQL 183
Query: 211 RED--YIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRG 250
ED Y FI+KQ +M ++ +LRWH V GD + +F G V+ G
Sbjct: 184 PEDGGYFFIYKQNVMEEDRTLRWHDVRSGDTIEIFNGRVTGG 225
>gi|240254322|ref|NP_176714.4| ubiquitin 13 [Arabidopsis thaliana]
gi|332196241|gb|AEE34362.1| ubiquitin 13 [Arabidopsis thaliana]
Length = 319
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 25/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++ +E + +V RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADNIQKESTLHLVL--------------RLRGGMQIFVKTLTGKTI 164
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 165 TLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 220
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 160 TGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 217
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ + T+ ++K KI +G P + L
Sbjct: 218 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRL 270
Query: 127 FFSGIELD 134
F+G +L+
Sbjct: 271 IFAGKQLE 278
>gi|348537407|ref|XP_003456186.1| PREDICTED: polyubiquitin-C-like [Oreochromis niloticus]
Length = 237
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 35/209 (16%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T +
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-L 67
Query: 68 DLTINPFLQ-------SSFN--QHDKIHIIIK-----------FPSRKFNIDVDRTDTVR 107
L + Q S +N + +H++++ + ++V+ +DT+
Sbjct: 68 HLVLFAGKQLEDGRTLSDYNIQKESTLHLVLRLRENMQIFVKTLTGKTITLEVEPSDTIE 127
Query: 108 SLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPI 167
++K KI +G P + L F+G +L+D R LS+Y I++ S + + L
Sbjct: 128 NVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVL------------ 174
Query: 168 RRLSFKVQTSSSLLNGASIPLEMQDSSTV 196
RL +Q L G +I LE++ S T+
Sbjct: 175 -RLRGGMQIFVKTLTGKTITLEVEPSDTI 202
>gi|429327043|gb|AFZ78850.1| polyubiquitin [Coptotermes formosanus]
Length = 230
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++K KI+ IP Q L +G +L DG ++DY I K+ T
Sbjct: 9 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ TD + +K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D L +Y I++ S + + L RL +Q L G I
Sbjct: 120 IFAGKQLED-GNTLQDYSIQKDSTLHLVL-------------RLRGGMQIFVKTLTGKHI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ + + +++ + + +P + I + + D +L+ + ++ L++
Sbjct: 166 TLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 221
>gi|7439572|pir||T02358 ubiquitin homolog T8F5.13 - Arabidopsis thaliana
gi|3335355|gb|AAC27157.1| Match to polyubiquitin DNA gb|L05401 from A. thaliana. Contains
insertion of mitochondrial NADH dehydrogenase gb|X82618
and gb|X98301. May be a pseudogene with an expressed
insert. EST gb|AA586248 comes from this region
[Arabidopsis thaliana]
Length = 324
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 25/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++ +E + +V RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADNIQKESTLHLVL--------------RLRGGMQIFVKTLTGKTI 164
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 165 TLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 220
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 160 TGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 217
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ + T+ ++K KI +G P + L
Sbjct: 218 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRL 270
Query: 127 FFSGIELD 134
F+G +L+
Sbjct: 271 IFAGKQLE 278
>gi|320162850|gb|EFW39749.1| polyubiquitin 5 [Capsaspora owczarzaki ATCC 30864]
Length = 218
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|27734329|gb|AAM51193.1| polyubiquitin [Haynesina germanica]
Length = 175
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 22/193 (11%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 3 GKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLIFAGKQLEDGRTLSDYNIQKEST--- 59
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + L+ + I +K + +DV+ DT++++K KI +G P ++ L
Sbjct: 60 LHLVLRLRGG-----AMQIFVKTLTGKTITLDVEPNDTIQNVKAKIQDKEGIPPEQQRLI 114
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G +L+D R LS+Y I++ S + + L RLR +Q L G +I
Sbjct: 115 FAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGGA--------MQIFVKTLTGKTIT 161
Query: 188 LEMQDSSTVNELR 200
L+++ + T+ ++
Sbjct: 162 LDVEPNDTIQNVK 174
>gi|1101011|gb|AAC46935.1| polyubiquitin, partial [Trichomonas vaginalis]
Length = 770
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++K KI+ IP Q L +G +L DG ++DY I K+ T
Sbjct: 18 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDST-- 75
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ TD + +K KI +G P + L
Sbjct: 76 -------LHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRL 128
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D L +Y I++ S + + L RL +Q L G I
Sbjct: 129 IFAGKQLED-GNTLQDYSIQKDSTLHLVL-------------RLRGGMQIFVKTLTGKHI 174
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ + + +++ + + +P + I + + D +L+ + ++ L++
Sbjct: 175 TLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 230
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++K KI+ IP Q L +G +L DG ++DY I K+ T
Sbjct: 246 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDST-- 303
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ TD + +K KI +G P + L
Sbjct: 304 -------LHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRL 356
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D L +Y I++ S + + L RL +Q L G I
Sbjct: 357 IFAGKQLED-GNTLQDYSIQKDSTLHLVL-------------RLRGGMQIFVKTLTGKHI 402
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ + + +++ + + +P + I + + D +L+ + ++ L++
Sbjct: 403 TLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 458
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++K KI+ IP Q L +G +L DG ++DY I K+ T
Sbjct: 474 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDST-- 531
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ TD + +K KI +G P + L
Sbjct: 532 -------LHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRL 584
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D L +Y I++ S + + L RL +Q L G I
Sbjct: 585 IFAGKQLED-GNTLQDYSIQKDSTLHLVL-------------RLRGGMQIFVKTLTGKHI 630
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ + + +++ + + +P + I + + D +L+ + ++ L++
Sbjct: 631 TLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDSTLHL 686
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++K KI+ IP Q L +G +L DG ++DY I K+ T
Sbjct: 626 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDST-- 683
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ TD + +K KI + +G P + L
Sbjct: 684 -------LHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQVKEGIPPDQQGL 736
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D + L +Y I++ S + + L+
Sbjct: 737 IFAGKQLED-GKTLQDYSIQKDSTLHLVLR 765
>gi|440792566|gb|ELR13775.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
Length = 153
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLR 148
>gi|71835909|gb|AAZ42330.1| ubiquitin protein 1 [Caenorhabditis remanei]
Length = 164
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 19 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 76
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 77 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 129
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 130 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 158
>gi|307174680|gb|EFN65063.1| Ubiquitin [Camponotus floridanus]
Length = 154
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|4150914|emb|CAA72800.1| polyubiquitin precursor [Suberites domuncula]
Length = 147
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 3 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 60
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 61 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 113
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 114 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 142
>gi|116783396|gb|ABK22925.1| unknown [Picea sitchensis]
Length = 262
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ I Q+L +G +L DG ++ DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLEDGRNLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQ----HDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKR 123
L +SF + D + +I + V +DT+ +K KI G P R
Sbjct: 143 ------ILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKIQGKKGIPPFR 196
Query: 124 MLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRD 163
L F+G +L+D RNL+ Y I+++S + V L+ LR+
Sbjct: 197 QRLIFAGKQLEDR-RNLAYYNIQKWSTLHVDLRLTCGLRN 235
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 28/240 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K I+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEII--VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGA 184
F+G +L+D RNL++Y I++ S I+ F++ RL+ + L G
Sbjct: 120 IFAGKQLEDG-RNLADYNIQKESTILGTSFIRV-----------RLTSDMLIFVITLTGE 167
Query: 185 SIPLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+I L + S T+ +++ + K +P R+ IF KQ + D +L ++ ++ L+V
Sbjct: 168 AITLVVATSDTIYDVKAKIQGKKGIPPFRQRLIFAGKQ--LEDRRNLAYYNIQKWSTLHV 225
>gi|402471724|gb|EJW05300.1| polyubiquitin [Edhazardia aedis USNM 41457]
Length = 153
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|357498825|ref|XP_003619701.1| Ubiquitin-like protein [Medicago truncatula]
gi|355494716|gb|AES75919.1| Ubiquitin-like protein [Medicago truncatula]
Length = 290
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 121/294 (41%), Gaps = 61/294 (20%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEI----------IVFLKTMNRL-------RDNPPIRR 169
F+G +L+D R L++Y I++ S + +F+KT+ R PP ++
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVERGYPPDQQ 178
Query: 170 ---------------LSFKVQTSSSL----------------LNGASIPLEMQDSSTVNE 198
+ +Q S+L L G +I LE++ S T++
Sbjct: 179 RLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDN 238
Query: 199 LRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRGGY 252
++ + + +P + I + + D +L + ++ L++ RGG+
Sbjct: 239 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--LRLRGGF 290
>gi|75858833|gb|ABA28993.1| polyubiquitin [Symbiodinium sp. C3]
Length = 176
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTV 196
LE++ S ++
Sbjct: 166 TLEVEPSDSI 175
>gi|379771652|gb|AFD18177.1| ubiquitin C, partial [Mylabris cichorii]
Length = 204
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 10 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGG 60
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 61 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 119
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I LE++ S T+ + +
Sbjct: 120 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVEAKI 166
Query: 204 LSSKILP 210
+ +P
Sbjct: 167 QDKEGIP 173
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 100 VDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMN 159
V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S + + L
Sbjct: 1 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVL---- 55
Query: 160 RLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHK 219
RL +Q L G +I LE++ S T+ ++ + + +P + I
Sbjct: 56 ---------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 106
Query: 220 QRIMRDNCSLRWHGVEYGDILYV 242
+ + D +L + ++ L++
Sbjct: 107 GKQLEDGRTLSDYNIQKESTLHL 129
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 70 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 126
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ +++ KI +G P + L
Sbjct: 127 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVEAKIQDKEGIPPDQQRLI 180
Query: 128 F 128
Sbjct: 181 L 181
>gi|182407852|gb|ACB87917.1| polyubiquitin 2 [Malus x domestica]
Length = 177
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 24/197 (12%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 4 GIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGGMQIFVKTLT 54
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S +
Sbjct: 55 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLH 113
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRE 212
+ L RLR R + V+T L G +I LE++ S T++ ++ + +P +
Sbjct: 114 LVL----RLR-----RGMQIFVKT----LTGKTITLEVESSDTIDNVKAKIQDKDGIPPD 160
Query: 213 DYIFIHKQRIMRDNCSL 229
I + + D +L
Sbjct: 161 QQTLIFAGKQLEDGRTL 177
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 54 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 111
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI DG P + L
Sbjct: 112 -------LHLVLRLRRGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKDGIPPDQQTL 164
Query: 127 FFSGIELDD 135
F+G +L+D
Sbjct: 165 IFAGKQLED 173
>gi|148908993|gb|ABR17600.1| unknown [Picea sitchensis]
Length = 252
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 28/240 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K I+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEII--VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGA 184
F+G +L+D RNL++Y I++ S I+ F++ RL+ + L G
Sbjct: 120 IFAGKQLEDG-RNLADYNIQKESTILGTSFIRV-----------RLTSDMLIFVITLTGE 167
Query: 185 SIPLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+I L + S T+ +++ + K +P R+ IF KQ + D +L ++ ++ L+V
Sbjct: 168 AITLVVATSDTIYDVKAKIQGKKGIPPFRQRLIFAGKQ--LEDRRNLAYYNIQKWSTLHV 225
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ I Q+L +G +L DG ++ DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLEDGRNLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQ----HDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKR 123
L +SF + D + +I + V +DT+ +K KI G P R
Sbjct: 143 ------ILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKIQGKKGIPPFR 196
Query: 124 MLLFFSGIELDDEFRNLSEYGIREFSEI-IVF 154
L F+G +L+D RNL+ Y I+++S + +VF
Sbjct: 197 QRLIFAGKQLEDR-RNLAYYNIQKWSTLHVVF 227
>gi|40647160|gb|AAR88386.1| polyubiquitin 1, partial [Plasmodiophora brassicae]
gi|40647162|gb|AAR88387.1| polyubiquitin 2, partial [Plasmodiophora brassicae]
Length = 175
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 22/194 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + L+ Q I +K + +DVD DT+ ++K KI +G P + L
Sbjct: 60 -LHLVLRLRGGTMQ-----IFVKTLTGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRL 113
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR +Q L G +I
Sbjct: 114 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGT--------MQIFVKTLTGKTI 160
Query: 187 PLEMQDSSTVNELR 200
L++ T+ ++
Sbjct: 161 TLDVDSGDTIETVK 174
>gi|114152964|gb|ABI52648.1| ubiquitin/40S ribosomal protein S27a fusion protein [Argas
monolakensis]
Length = 232
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T L + I +K + ++V+ +DT+ ++K KI +G
Sbjct: 61 IQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG 111
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
P + L F+G +L+D R LS+Y I++ S + + L+
Sbjct: 112 IPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|32400969|gb|AAP80690.1| polyubiquitin [Griffithsia japonica]
Length = 195
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 43 MQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 102
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T L + I +K + ++V+ +DT+ ++K KI +G
Sbjct: 103 IQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEG 153
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
P + L F+G +L+D R LS+Y I++ S + + L+
Sbjct: 154 IPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLR 190
>gi|408776165|gb|AFU90137.1| polyubiquitin, partial [Paeonia lactiflora]
Length = 169
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 24/177 (13%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 7 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGG 57
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y
Sbjct: 58 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADY 116
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELR 200
I++ S + + L RL +Q L G +I LE++ S T++ ++
Sbjct: 117 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 160
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 103 TDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLR 162
+DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S + + L
Sbjct: 1 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHLVL------- 52
Query: 163 DNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRI 222
RL +Q L G +I LE++ S T++ ++ + + +P + I +
Sbjct: 53 ------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 106
Query: 223 MRDNCSLRWHGVEYGDILYV 242
+ D +L + ++ L++
Sbjct: 107 LEDGRTLADYNIQKESTLHL 126
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 66 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 123
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIH 114
L + I +K + ++V+ +DT+ ++K KI
Sbjct: 124 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQ 164
>gi|163575|gb|AAA30720.1| polyubiquitin, partial [Bos taurus]
Length = 164
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 20 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 77
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 78 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 130
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 131 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 159
>gi|357016993|gb|AET50525.1| hypothetical protein [Eimeria tenella]
Length = 153
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|7799051|emb|CAB90826.1| ubiquitin [Cyanidium caldarium]
Length = 153
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|123718340|emb|CAL30085.1| polyubiquitin [Globodera pallida]
Length = 154
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLR 148
>gi|209875527|ref|XP_002139206.1| ubiquitin family protein [Cryptosporidium muris RN66]
gi|209554812|gb|EEA04857.1| ubiquitin family protein [Cryptosporidium muris RN66]
Length = 155
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|28189839|dbj|BAC56534.1| similar to polyubiquitin [Bos taurus]
Length = 157
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 13 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 70
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 71 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 123
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 124 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 152
>gi|397614491|gb|EJK62831.1| hypothetical protein THAOC_16543 [Thalassiosira oceanica]
Length = 240
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 96 TGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 153
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 154 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKTKIQDKEGIPPDQQRL 206
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 207 IFAGKQLEDG-RTLSDYNIQKESTLHLVLR 235
>gi|372467011|pdb|3U30|A Chain A, Crystal Structure Of A Linear-Specific Ubiquitin Fab Bound
To Linear Ubiquitin
gi|372467014|pdb|3U30|D Chain D, Crystal Structure Of A Linear-Specific Ubiquitin Fab Bound
To Linear Ubiquitin
Length = 172
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 29 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 86
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 87 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 139
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 140 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 168
>gi|145498050|ref|XP_001435013.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402142|emb|CAK67616.1| unnamed protein product [Paramecium tetraurelia]
Length = 153
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKNITLDVEPSDTIDAVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|395836339|ref|XP_003791115.1| PREDICTED: polyubiquitin-B [Otolemur garnettii]
gi|149287178|gb|ABR23488.1| ubiquitin/40S ribosomal protein S27a [Ornithodoros parkeri]
gi|194374819|dbj|BAG62524.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|428672795|gb|EKX73708.1| ubiquitin family member protein [Babesia equi]
Length = 155
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|302393789|sp|P62972.2|UBIQP_XENLA RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|2118960|pir||I51568 polyubiquitin - African clawed frog (fragment)
gi|214864|gb|AAA49978.1| polyubiquitin, partial [Xenopus laevis]
Length = 167
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 24 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 81
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 82 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 134
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 135 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 163
>gi|400599610|gb|EJP67307.1| Ubiquitin subgroup [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 121 FAGKQLED-GRTLSDYNIQKESTLHLVLR 148
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 26/148 (17%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 86 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 142
Query: 69 LTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFF 128
+H++++ V+ +DT+ ++K KI +G P + L F
Sbjct: 143 ----------------LHLVLRLRG------VESSDTIDNVKSKIQDKEGIPPDQQRLIF 180
Query: 129 SGIELDDEFRNLSEYGIREFSEIIVFLK 156
+G +L+D R LS+Y I++ S + + L+
Sbjct: 181 AGKQLED-GRTLSDYNIQKESTLHLVLR 207
>gi|365759560|gb|EHN01342.1| Ubi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297682|gb|EIW08781.1| Ubi4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|5523969|gb|AAD44037.1|AF104020_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 318
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP + L +G +L DG + DY I KE T
Sbjct: 118 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQRRLIFAGKQLEDGRTLSDYNIQKEST-- 175
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 176 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 228
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPP 166
F+G +L+D R LS+Y I++ S + + L RLR P
Sbjct: 229 IFAGKQLEDG-RTLSDYNIQKESTLHLVL----RLRGGGP 263
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T +
Sbjct: 194 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-L 252
Query: 68 DLTI-----NPFLQSSFNQHDKIHIII 89
L + P + H+K H+ I
Sbjct: 253 HLVLRLRGGGPAVCKKITNHEKCHVSI 279
>gi|367006115|ref|XP_003687789.1| hypothetical protein TPHA_0K02250 [Tetrapisispora phaffii CBS 4417]
gi|357526094|emb|CCE65355.1| hypothetical protein TPHA_0K02250 [Tetrapisispora phaffii CBS 4417]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|24640094|ref|NP_572306.1| CG11700 [Drosophila melanogaster]
gi|7290696|gb|AAF46143.1| CG11700 [Drosophila melanogaster]
Length = 301
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K +I IP Q L +G +L DG + DY
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T L + I +K + ++V+ +DT++ +K +IH DG
Sbjct: 213 IQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIKHVKARIHDKDG 263
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEI 151
P L F+G +L+D R LS+Y I++ S +
Sbjct: 264 IPPDHQRLIFAGKQLED-GRTLSDYNIQKESTL 295
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ P Q L G L +G + DY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYN 60
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T + + I +K + ++V+ +DT+ ++K KI +
Sbjct: 61 IQKEST---------IYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEE 111
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSS 178
P + L F G L++ R LS+Y I++ S I + L RL +Q
Sbjct: 112 NPPEHQRLIFGGKHLEN-GRTLSDYNIQKESTIYLVL-------------RLRGGMQIFV 157
Query: 179 SLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGD 238
L G +I LE++ S ++ ++ + + +P + I + + D +L + ++
Sbjct: 158 KTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217
Query: 239 ILYV 242
L++
Sbjct: 218 TLHL 221
>gi|363756558|ref|XP_003648495.1| hypothetical protein Ecym_8408 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891695|gb|AET41678.1| Hypothetical protein Ecym_8408 [Eremothecium cymbalariae
DBVPG#7215]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|323453810|gb|EGB09681.1| polyubiquitin, partial [Aureococcus anophagefferens]
Length = 134
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 3 GKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 59
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + +DV+ +DT+ ++K+KI +G P + L
Sbjct: 60 ------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLI 113
Query: 128 FSGIELDDEFRNLSEYGIREFS 149
F+G +L+D R LS+Y I++ S
Sbjct: 114 FAGKQLED-GRTLSDYNIQKES 134
>gi|224321|prf||1101405A ubiquitin precursor
Length = 191
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 48 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 104
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 105 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 158
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 159 FAGKQLED-GRTLSDYNIQKESTLHLVLR 186
>gi|226484009|emb|CAX79673.1| ubiquitin C [Schistosoma japonicum]
gi|226484011|emb|CAX79674.1| ubiquitin C [Schistosoma japonicum]
gi|226484013|emb|CAX79675.1| ubiquitin C [Schistosoma japonicum]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|56199554|gb|AAV84266.1| ubiquitin [Culicoides sonorensis]
Length = 191
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 47 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 104
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 105 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 157
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 158 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 186
>gi|1326022|emb|CAA25706.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 191
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 48 GKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 104
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 105 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 158
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 159 FAGNQLED-GRTLSDYNIQKESTLHLVLR 186
>gi|225733991|pdb|2ZVN|A Chain A, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
Space Group
gi|225733992|pdb|2ZVN|G Chain G, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
Space Group
gi|225733995|pdb|2ZVN|C Chain C, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
Space Group
gi|225733996|pdb|2ZVN|E Chain E, Nemo Cozi Domain Incomplex With Diubiquitin In P212121
Space Group
gi|225733999|pdb|2ZVO|A Chain A, Nemo Cozi Domain In Complex With Diubiquitin In C2 Space
Group
gi|225734000|pdb|2ZVO|G Chain G, Nemo Cozi Domain In Complex With Diubiquitin In C2 Space
Group
gi|374074071|pdb|3AXC|A Chain A, Crystal Structure Of Linear Diubiquitin
Length = 154
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 11 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 68
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 69 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 121
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 122 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 150
>gi|212851|gb|AAA49129.1| ubiquitin polyprotein (heat shock related), partial [Gallus gallus]
Length = 157
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 13 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 70
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 71 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 123
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 124 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 152
>gi|355753795|gb|EHH57760.1| Polyubiquitin-C [Macaca fascicularis]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTLENVKAKIQDKEGIPPDQQRLIFAGQQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|350537349|ref|NP_001232755.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
gi|326929576|ref|XP_003210936.1| PREDICTED: polyubiquitin-like [Meleagris gallopavo]
gi|197129060|gb|ACH45558.1| putative ubiquitin C variant 4 [Taeniopygia guttata]
gi|225708456|gb|ACO10074.1| Ubiquitin [Osmerus mordax]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|71033201|ref|XP_766242.1| ubiquitin [Theileria parva strain Muguga]
gi|68353199|gb|EAN33959.1| ubiquitin, putative [Theileria parva]
Length = 155
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|326931517|ref|XP_003211875.1| PREDICTED: polyubiquitin-B-like isoform 1 [Meleagris gallopavo]
gi|326931519|ref|XP_003211876.1| PREDICTED: polyubiquitin-B-like isoform 2 [Meleagris gallopavo]
gi|149052896|gb|EDM04713.1| rCG34296, isoform CRA_a [Rattus norvegicus]
gi|149052897|gb|EDM04714.1| rCG34296, isoform CRA_a [Rattus norvegicus]
gi|344245202|gb|EGW01306.1| Ubiquitin [Cricetulus griseus]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|256079432|ref|XP_002575991.1| ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|323451976|gb|EGB07851.1| ubiquitin [Aureococcus anophagefferens]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +D++ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|238580222|ref|XP_002389222.1| hypothetical protein MPER_11681 [Moniliophthora perniciosa FA553]
gi|215451253|gb|EEB90152.1| hypothetical protein MPER_11681 [Moniliophthora perniciosa FA553]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|145498417|ref|XP_001435196.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402326|emb|CAK67799.1| unnamed protein product [Paramecium tetraurelia]
Length = 369
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 225 TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 282
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 283 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRL 335
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 336 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 364
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 116/291 (39%), Gaps = 70/291 (24%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKE---- 63
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE
Sbjct: 9 TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 64 -----------------GTKIDLTINPF---------LQSS-----------FNQHDKIH 86
G I L + P +Q F +H +I
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAEHSQII 128
Query: 87 IIIKF--PSRKFNI-------------DVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGI 131
I + PS F I DV+ +DT+ ++K KI +G P + L F+G
Sbjct: 129 TIQRGINPSLGFKIKRRNTLTGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGK 188
Query: 132 ELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQ 191
+L+D R LS+Y I++ S + + L RL +Q L G +I L+++
Sbjct: 189 QLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLDVE 234
Query: 192 DSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 235 PSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 285
>gi|403221030|dbj|BAM39163.1| ubiquitin [Theileria orientalis strain Shintoku]
Length = 155
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|374073976|pdb|2Y5B|B Chain B, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
gi|374073978|pdb|2Y5B|F Chain F, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
Length = 152
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGHMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|361130305|pdb|3B08|A Chain A, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130307|pdb|3B08|D Chain D, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130309|pdb|3B08|G Chain G, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130311|pdb|3B08|J Chain J, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130437|pdb|3B0A|A Chain A, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
gi|361130439|pdb|3B0A|D Chain D, Crystal Structure Of The Mouse Hoil1-L-Nzf In Complex With
Linear Di- Ubiquitin
Length = 152
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|226477466|emb|CAX72427.1| polyubiquitin [Schistosoma japonicum]
Length = 170
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|124784704|gb|ABN14989.1| polyubiquitin [Taenia asiatica]
Length = 200
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 51 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 108
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 109 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRL 161
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLR 162
F+G +L+D R LS+Y I++ S + + L+ +R
Sbjct: 162 IFAGKQLED-GRTLSDYNIQKESTLHLVLRLRGGMR 196
>gi|224284138|gb|ACN39806.1| unknown [Picea sitchensis]
Length = 252
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 28/240 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K I+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTISLEVESSDIIDNLKADIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEII--VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGA 184
F+G +L D RNL++Y I++ S I+ F++ RL+ + L G
Sbjct: 120 IFAGKQLGDG-RNLADYNIQKESTILGTSFIRV-----------RLTSDMLIFVITLTGE 167
Query: 185 SIPLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+I L + S T+ +++ + K +P R+ IF KQ + D +L ++ ++ L+V
Sbjct: 168 AITLVVATSDTIYDVKAKIQGKKGIPPFRQRLIFAGKQ--LEDRRNLAYYNIQKWSTLHV 225
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ I Q+L +G +L DG ++ DY I KE T
Sbjct: 85 TGKTITLEVESSDTIDNVKAKIQDKEGILPDQQSLIFAGKQLGDGRNLADYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQ----HDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKR 123
L +SF + D + +I + V +DT+ +K KI G P R
Sbjct: 143 ------ILGTSFIRVRLTSDMLIFVITLTGEAITLVVATSDTIYDVKAKIQGKKGIPPFR 196
Query: 124 MLLFFSGIELDDEFRNLSEYGIREFSEI-IVF 154
L F+G +L+D RNL+ Y I+++S + +VF
Sbjct: 197 QRLIFAGKQLEDR-RNLAYYNIQKWSTLHVVF 227
>gi|84998672|ref|XP_954057.1| ubiquitin [Theileria annulata]
gi|65305055|emb|CAI73380.1| ubiquitin, putative [Theileria annulata]
Length = 159
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|228311825|pdb|2W9N|A Chain A, Crystal Structure Of Linear Di-Ubiquitin
Length = 152
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|403217874|emb|CCK72367.1| hypothetical protein KNAG_0J02880 [Kazachstania naganishii CBS
8797]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|414865716|tpg|DAA44273.1| TPA: Ubiquitin fusion protein [Zea mays]
Length = 205
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 121 FAGKQLED-GRTLADYNIQKESTLHLVLR 148
>gi|164661299|ref|XP_001731772.1| hypothetical protein MGL_1040 [Malassezia globosa CBS 7966]
gi|159105673|gb|EDP44558.1| hypothetical protein MGL_1040 [Malassezia globosa CBS 7966]
Length = 154
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|336372502|gb|EGO00841.1| hypothetical protein SERLA73DRAFT_121253 [Serpula lacrymans var.
lacrymans S7.3]
Length = 371
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 227 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 284
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 285 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 337
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 338 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 366
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 34/236 (14%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P +
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ-- 117
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 118 ---------HGRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 155
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 156 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 211
>gi|28189917|dbj|BAC56573.1| similar to polyubiquitin [Bos taurus]
Length = 171
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 18 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 75
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 76 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 128
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 129 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 157
>gi|86370988|gb|ABC94632.1| ubiquitin C [Ictalurus punctatus]
Length = 192
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 48 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 105
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 106 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIGNVKAKIQDKEGIPPDQQRL 158
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 159 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 187
>gi|56199552|gb|AAV84265.1| ubiquitin [Culicoides sonorensis]
Length = 167
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|343960965|dbj|BAK62072.1| ubiquitin [Pan troglodytes]
Length = 177
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 24/184 (13%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRALSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEM 190
LE+
Sbjct: 166 TLEV 169
>gi|281211832|gb|EFA85994.1| hypothetical protein PPL_01227 [Polysphondylium pallidum PN500]
Length = 385
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 240 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 297
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 298 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRL 350
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 351 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 379
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 29/240 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGT----PIK 122
L + I +K + ++V+ +DT+ ++K KI PI
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEGSDTIENVKTKIQGYRARMVFHPIN 119
Query: 123 RMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLN 182
+ L+ F+G +L+D R LS+Y I++ S + + L RL +Q L
Sbjct: 120 QRLI-FAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLT 164
Query: 183 GASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
G +I LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 165 GKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 224
>gi|159486707|ref|XP_001701379.1| bi-ubiquitin, major isoform [Chlamydomonas reinhardtii]
gi|158271681|gb|EDO97495.1| bi-ubiquitin, major isoform [Chlamydomonas reinhardtii]
Length = 153
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLR 148
>gi|4589760|dbj|BAA76889.1| ubiquitin [Trichophyton mentagrophytes]
gi|6539532|dbj|BAA88168.1| ubiquitin [Arthroderma otae]
Length = 153
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|326522440|dbj|BAK07682.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 293
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 1 MRIIIVAN--GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDG-LDMED 57
M+I ++ G LEV + + ++K KIE I P Q L + +L DG L +ED
Sbjct: 137 MQIFVMETLEGRTITLEVDSLDTIDKVKAKIEDIEGFPKVQQCLIFANKQLDDGKLTLED 196
Query: 58 YPIVKEGTK--IDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIH 114
+ I K T I L NP + + + IK + + V R+DT+ S+K KI+
Sbjct: 197 HNIGKGSTLLLILLPCNPTV--------VMELFIKMWRGNTLTLKVGRSDTIGSVKVKIY 248
Query: 115 IIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEI 151
DG P ++ L F+G +L+D R L++Y I++ S I
Sbjct: 249 EHDGIPPRQQRLIFAGTQLED-HRTLADYKIQQESTI 284
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 16 VGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFL 75
V L + V IK KI++ + L + G +L D + DY G + D T++ L
Sbjct: 88 VHLSDTVYTIKAKIQERYR-------LVLDGVQLEDNRTLADY-----GVQHDSTLD--L 133
Query: 76 QSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDD 135
Q +I ++ R ++VD DT+ +K KI I+G P + L F+ +LDD
Sbjct: 134 QEKM----QIFVMETLEGRTITLEVDSLDTIDKVKAKIEDIEGFPKVQQCLIFANKQLDD 189
Query: 136 EFRNLSEYGIREFSEIIVFLKTMN 159
L ++ I + S +++ L N
Sbjct: 190 GKLTLEDHNIGKGSTLLLILLPCN 213
>gi|290971454|ref|XP_002668516.1| polyubiquitin [Naegleria gruberi]
gi|290992572|ref|XP_002678908.1| polyubiquitin [Naegleria gruberi]
gi|284081958|gb|EFC35772.1| polyubiquitin [Naegleria gruberi]
gi|284092522|gb|EFC46164.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +KRK++ IP Q L +G +L DG + DY I K+ T
Sbjct: 10 GKTITLEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRTINDYNIQKDST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K + I+++ DT++++K+KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQLFVKTLTGKTITIEMESNDTIQNMKQKIFDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
++G +L+D R LS+Y +++ S + + L+
Sbjct: 121 YAGKQLED-GRQLSDYNLQKDSTVHLVLR 148
>gi|449483218|ref|XP_004156525.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
sativus]
Length = 208
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES--- 65
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
T++ L+ + + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 66 --TLHLVLRLRGGIIEPMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 123
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 124 IFAGKQLED-GRTLADYNIQKESTLHLVLR 152
>gi|340382247|ref|XP_003389632.1| PREDICTED: hypothetical protein LOC100638437 [Amphimedon
queenslandica]
Length = 1307
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 35/244 (14%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLD--MEDYPIVKEGT- 65
G L V + V +IK KI+Q NIP Q L G L + L+ + D I ++ T
Sbjct: 16 GATVTLLVDELDTVKDIKLKIQQEANIPVAKQKLLFDGRTLSEELNCTVTDCDIFEQATI 75
Query: 66 -KIDLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDR-TDTVRSLKEKIHIIDGTPIK 122
+ LTI I I+F + + F+ DV+ DT+ ++K+ I +G P+
Sbjct: 76 FLVVLTI---------------ISIRFVTGEIFSTDVNLVADTIETIKQSIEERNGVPLN 120
Query: 123 RMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSS-SLL 181
+ L F G EL+D+ LS+ I + S I+ +K +SF++ + +
Sbjct: 121 QQCLIFKGKELNDDLSTLSDCKIEDGSVILFTIKGA-----------ISFQISIKTLPIY 169
Query: 182 NGAS-IPLEMQDSSTVNELRHLLLSSKILP-REDYIFIHKQRIMRDNCSLRWHGVEYGDI 239
+G I L ++ + T+ ++ ++++ + +P + + + + I D+ +L H + GDI
Sbjct: 170 SGKDHIKLIVKSTDTIAHVKAMIVAKEGIPINKQCLIFNGKHIYADDATLADHKISSGDI 229
Query: 240 LYVF 243
L++
Sbjct: 230 LHLL 233
>gi|302851086|ref|XP_002957068.1| polyubiquitin [Volvox carteri f. nagariensis]
gi|300257624|gb|EFJ41870.1| polyubiquitin [Volvox carteri f. nagariensis]
Length = 153
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLR 148
>gi|82622379|gb|ABB86777.1| unknown [Theileria lestoquardi]
Length = 159
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDEEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|164510220|emb|CAJ41450.1| ubiquitin [Alvinella caudata]
Length = 152
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVEASDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + P L+ + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 67 LHLVPRLRGG------MQIFVKTLTGKTITLEVEASDNIENVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L +Y I++ S + + L+
Sbjct: 121 FAGKQLED-GRTLGDYNIQKESTLHLVLR 148
>gi|10719701|gb|AAG22093.1| ubiquitin [Scyliorhinus torazame]
Length = 173
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G EV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 33 TGKTITXEVEPSDTIENVKAKIQXKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKEST-- 90
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +V+ +DT+ ++K KI +G P + L
Sbjct: 91 -------LHLVLRLRGGMQIFVKTLTGKTITXEVEPSDTIENVKAKIQXKEGIPPDQQRL 143
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L +E R LS+Y I++ S + + L+
Sbjct: 144 IFAGKQL-EEXRTLSDYNIQKXSTLHLVLR 172
>gi|388571222|gb|AFK73707.1| ubiquitin [Ostrea edulis]
Length = 153
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDRQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|239788927|dbj|BAH71116.1| ACYPI006410 [Acyrthosiphon pisum]
Length = 154
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|239799385|dbj|BAH70616.1| ACYPI007765 [Acyrthosiphon pisum]
Length = 153
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D++ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|386278574|gb|AFJ04519.1| ubiquitin, partial [Vernicia fordii]
Length = 176
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 32 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 89
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 90 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 142
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 143 IFAGKQLED-GRTLADYNIQKESTLHLVLR 171
>gi|149391401|gb|ABR25718.1| polyubiquitin containing 7 ubiquitin monomers [Oryza sativa Indica
Group]
Length = 178
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 34 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 91
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 92 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 144
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 145 IFAGKQLED-GRTLADYNIQKESTLHLVLR 173
>gi|26353460|dbj|BAC40360.1| unnamed protein product [Mus musculus]
Length = 153
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q + +G +L DG + DY I KE T +
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKEST-L 67
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
DL + + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 68 DLVL--------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|40647164|gb|AAR88388.1| polyubiquitin 3, partial [Plasmodiophora brassicae]
Length = 175
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLDVDSGDTIETVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + L+ Q I +K + +DVD D + ++K KI +G P + L
Sbjct: 60 -LHLVLRLRGGTMQ-----IFVKTLTGKTITLDVDSGDAIETVKAKIQDKEGIPPDQQRL 113
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RLR +Q L G +I
Sbjct: 114 IFAGKQLED-GRTLADYNIQKESTLHLVL----RLRGGT--------MQIFVKTLTGKTI 160
Query: 187 PLEMQDSSTVNELR 200
L++ T+ ++
Sbjct: 161 TLDVDSGDTIETVK 174
>gi|86439763|emb|CAJ19359.1| polyubiquitin-like protein [Triticum aestivum]
Length = 200
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 74/182 (40%), Gaps = 28/182 (15%)
Query: 96 FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIEL-DDEFRNLS---EYGIREFSEI 151
F ++V DTV +K K+ +G P + LF G L DD+ YG+ E S I
Sbjct: 15 FKMEVGFFDTVLDIKHKLQGRNGWPAAALSLFHDGGALVDDDAAGAGVTERYGVVEGSVI 74
Query: 152 IVFLKTMNRLRDNPP--------IRRLSFKVQTSS---------SLLNGASIPLEMQDSS 194
V L D P RR ++ + S + + ++
Sbjct: 75 HVALDGAGDGDDRRPRQKGKKNGTRRPGKGMRAPAPEPLRVTVVSRCGAGRVEVAVRARG 134
Query: 195 TVNELRHLLLSSKI------LPRED-YIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTV 247
V+ LR L LP + Y FIH Q +M + S WHGV GD + VF+G+V
Sbjct: 135 AVSALRRELEGGASSGSGFPLPADGGYFFIHGQSVMDEARSFEWHGVAAGDEVVVFEGSV 194
Query: 248 SR 249
+R
Sbjct: 195 TR 196
>gi|54610299|gb|AAV35212.1| polyubiquitin-like protein [Schistosoma japonicum]
Length = 156
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 12 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 69
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 70 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 122
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ + + + L+
Sbjct: 123 IFAGKQLED-GRTLSDYNIQKEATLHLVLR 151
>gi|301094179|ref|XP_002997933.1| ubiquitin, putative [Phytophthora infestans T30-4]
gi|262109719|gb|EEY67771.1| ubiquitin, putative [Phytophthora infestans T30-4]
Length = 175
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDSIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +D++ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|395536787|ref|XP_003770393.1| PREDICTED: polyubiquitin-C-like, partial [Sarcophilus harrisii]
Length = 243
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 66 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST------ 119
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 120 ---LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 176
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEM 190
+L+D R LS+Y I++ S + + L RL +Q L G +I LE+
Sbjct: 177 KQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEV 222
Query: 191 Q 191
+
Sbjct: 223 E 223
>gi|302595966|sp|P0CG83.1|UBIQP_HORVU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|755763|emb|CAA27751.1| unnamed protein product [Hordeum vulgare subsp. vulgare]
Length = 171
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 27 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 84
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 85 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 137
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 138 IFAGKQLED-GRTLADYNIQKESTLHLVLR 166
>gi|21554192|gb|AAM63271.1| unknown [Arabidopsis thaliana]
Length = 154
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQXLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLR 148
>gi|82512|pir||PS0380 ubiquitin precursor - rice (fragment)
gi|218189|dbj|BAA02241.1| poly-ubiquitin [Oryza sativa Japonica Group]
Length = 189
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 45 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 102
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 103 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 155
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 156 IFAGKQLED-GRTLADYNIQKESTLHLVLR 184
>gi|254802948|gb|ACT82769.1| polyubiquitin [Nicotiana tabacum]
Length = 188
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 31 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 88
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 89 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 141
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 142 IFAGKQLED-GRTLADYNIQKESTLHLVLR 170
>gi|242074418|ref|XP_002447145.1| hypothetical protein SORBIDRAFT_06g029360 [Sorghum bicolor]
gi|241938328|gb|EES11473.1| hypothetical protein SORBIDRAFT_06g029360 [Sorghum bicolor]
Length = 153
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLR 148
>gi|39939489|gb|AAR32784.1| polyubiquitin [Clusia minor]
Length = 223
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 37 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 94
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 95 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 147
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 148 IFAGKQLED-GRTLADYNIQKESTLHLVLR 176
>gi|1805696|emb|CAA71664.1| polyubiquitin [Ceratitis capitata]
Length = 134
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 60 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 112
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
F+G +L+D R LS+Y I++ S
Sbjct: 113 IFAGKQLED-GRTLSDYNIQKES 134
>gi|167519655|ref|XP_001744167.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777253|gb|EDQ90870.1| predicted protein [Monosiga brevicollis MX1]
Length = 153
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K S K ++V+ +D++ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLSGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|71534894|gb|AAZ32851.1| pentameric polyubiquitin [Medicago sativa]
Length = 189
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 31 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 88
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 89 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 141
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 142 IFAGKQLED-GRTLADYNIQKESTLHLVLR 170
>gi|413926514|gb|AFW66446.1| ubiquitin2 [Zea mays]
gi|413935669|gb|AFW70220.1| polyubiquitin-like protein [Zea mays]
Length = 153
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLR 148
>gi|54300702|gb|AAV33127.1| ubiquitin C splice variant [Homo sapiens]
Length = 153
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSGYNIQKESTLHLVLR 148
>gi|334186377|ref|NP_001190681.1| ubiquitin 11 [Arabidopsis thaliana]
gi|357512383|ref|XP_003626480.1| Ubiquitin-like protein [Medicago truncatula]
gi|40287484|gb|AAR83856.1| hexameric polyubiquitin 6PU11 [Capsicum annuum]
gi|147802377|emb|CAN77120.1| hypothetical protein VITISV_031666 [Vitis vinifera]
gi|217074820|gb|ACJ85770.1| unknown [Medicago truncatula]
gi|332657071|gb|AEE82471.1| ubiquitin 11 [Arabidopsis thaliana]
gi|355501495|gb|AES82698.1| Ubiquitin-like protein [Medicago truncatula]
gi|388491722|gb|AFK33927.1| unknown [Medicago truncatula]
gi|388492650|gb|AFK34391.1| unknown [Lotus japonicus]
gi|399513944|gb|AFP43342.1| polyubiquitin [Arabidopsis thaliana]
Length = 153
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLR 148
>gi|290979754|ref|XP_002672598.1| polyubiquitin [Naegleria gruberi]
gi|284086176|gb|EFC39854.1| polyubiquitin [Naegleria gruberi]
Length = 154
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + L+ + I +K + ++V+ DT+ ++K KI +G P + L
Sbjct: 67 LHLVLRLRGG-----GMQIFVKTLTGKTITLEVESNDTIENVKSKIQDKEGIPPDQQRLI 121
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 122 FAGKQLED-GRTLSDYNIQKESTLHLVLR 149
>gi|384371341|gb|ABF06579.2| polyubiquitin, partial [Gladiolus grandiflorus]
Length = 162
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLR 148
>gi|3789940|gb|AAC67551.1| tetra-ubiquitin [Saccharum hybrid cultivar H32-8560]
Length = 305
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + +K KI+ IP Q L +G +L DG + DY
Sbjct: 153 MQIFVKTXTGKTITLEVESSDTXDNVKXKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I KE T L + I +K + ++V+ +DT+ ++K KI +G
Sbjct: 213 IQKEST---------LHLVLRXRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 263
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
P + L F+G +L+D R L++Y I++ S + + L+
Sbjct: 264 IPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHLVLR 300
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 26/237 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTK- 66
G LEV + + + KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDXIDXVXAKIQDKEGIPPDQQRLIFAGKQLEDGRTLXDYNIQKESTXH 68
Query: 67 IDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRML 125
+ L + +Q I +K + ++V+ +DT+ ++K KI +G P +
Sbjct: 69 LVLRLRGGMQ----------IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQR 118
Query: 126 LFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGAS 185
L F+G +L+D R L++Y I+ S + L R +Q G +
Sbjct: 119 LIFAGKQLED-GRTLADYNIQXESXXHLVL-------------RXRGGMQIFVKTXTGKT 164
Query: 186 IPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I LE++ S T + ++ + + +P + I + + D +L + ++ L++
Sbjct: 165 ITLEVESSDTXDNVKXKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>gi|1321735|emb|CAA64326.1| ubiquitin [Carabus alpestris]
Length = 139
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIRE 147
F+G +L+D R LS+Y I++
Sbjct: 120 IFAGKQLED-GRTLSDYNIQK 139
>gi|2641213|gb|AAB86858.1| polyubiquitin, partial [Schizophyllum commune]
Length = 139
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIRE 147
F+G +L+D R LS+Y I++
Sbjct: 120 IFAGKQLED-GRTLSDYNIQK 139
>gi|392569339|gb|EIW62512.1| ubiquitin-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 769
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 132 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 189
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ + K KI +G P + L
Sbjct: 190 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNSKAKIQDKEGIPPDQQRL 242
Query: 127 FFSGIELDDEFRNLSEYGIREFSEI 151
F+G +L+D R LS+Y I++ S +
Sbjct: 243 IFAGKQLEDG-RTLSDYNIQKESTL 266
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 30/244 (12%)
Query: 3 IIIVAN---GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
+I V N G LE + + +K I + Q L +G +L + DY
Sbjct: 381 LIFVKNPTVGKTIALEADSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSRRTVSDYN 440
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDG 118
+ ++G+ + L F D + I +K S K ++V DT+ S+K KI +G
Sbjct: 441 M-RKGSTVFLI--------FRVLDGMQISVKTLSGKTITLEVKPLDTIGSIKTKIQAKEG 491
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSS 178
TP + + F+ EL+++ R L +Y I+ S + + + R V+ +
Sbjct: 492 TPPDQQCVKFADDELEED-RTLLDYNIQWNSTLQL-------------VGRFQIFVKRA- 536
Query: 179 SLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGD 238
L + PLE++ S T+ +++ + + I ++++D C L G++
Sbjct: 537 --LTRETTPLEVKSSDTIKDVKEKYQDKEGVAPAHQRLIFAGKLLQDGCVLSDCGIQKES 594
Query: 239 ILYV 242
L++
Sbjct: 595 TLHL 598
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 29/170 (17%)
Query: 1 MRIIIVA-NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + + G ++ + + ++ KI + I S L +G EL DG + DY
Sbjct: 605 MQIFVKSFTGKTITIKAKPSDTIGRVREKIRDVEGISPDS-ILKFAGKELEDGRLLSDYN 663
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIKFP-------SRKFNIDVDRTDTVRSLKEK 112
I E D +H+I F + ++ + DTV ++K K
Sbjct: 664 IQGE-------------------DTLHLIRYFQIFVRSMRGKTVTLEAEPFDTVENVKAK 704
Query: 113 IHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLR 162
IH +G P L F+G +L D R LS+Y I S + + +++ R
Sbjct: 705 IHDKEGCPPDLQRLIFAGKQLVDG-RTLSDYSIPNNSTLHLVYRSIGGTR 753
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 17/136 (12%)
Query: 14 LEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTIN- 72
LEV + + ++K K + + Q L +G L DG + D I KE T + L I
Sbjct: 544 LEVKSSDTIKDVKEKYQDKEGVAPAHQRLIFAGKLLQDGCVLSDCGIQKEST-LHLVIRL 602
Query: 73 PFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG-TPIKRMLLFFSG 130
P +Q I +K F + I +DT+ ++EKI ++G +P +L F+G
Sbjct: 603 PGMQ----------IFVKSFTGKTITIKAKPSDTIGRVREKIRDVEGISP--DSILKFAG 650
Query: 131 IELDDEFRNLSEYGIR 146
EL+D R LS+Y I+
Sbjct: 651 KELEDG-RLLSDYNIQ 665
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 73/161 (45%), Gaps = 36/161 (22%)
Query: 94 RKFNIDVDRTDTVRSLKEKIHIIDGT-------PIKRMLLFFSGIELDDEFRNLSEYGIR 146
+ ++V+ +DT+ ++K KI +GT P + L F+G +L+D R LS+Y I+
Sbjct: 56 KTITLEVESSDTIDNVKAKIQDKEGTDIPSASLPPDQQRLIFAGKQLEDG-RTLSDYSIQ 114
Query: 147 EFSEI-----IVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRH 201
+ S + +F+KT L G +I LE++ S T++ ++
Sbjct: 115 KESTLHLGGMQIFVKT-----------------------LTGKTITLEVESSDTIDNVKA 151
Query: 202 LLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ + +P + I + + D +L + ++ L++
Sbjct: 152 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 192
>gi|3954791|emb|CAA26488.1| unnamed protein product [Gallus gallus]
Length = 157
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 13 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 70
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P +
Sbjct: 71 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRW 123
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 124 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 152
>gi|61889379|emb|CAI51312.2| polyubiquitin [Capsicum chinense]
Length = 153
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRFRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 120 IFAGKQLEDG-RTLADYNIQKESTLHLVLR 148
>gi|73747822|gb|AAZ82816.1| ubiquitin monomer protein [Morus mongolica]
Length = 152
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEI 151
F+G +L+D R L++Y I++ S +
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTL 143
>gi|90075190|dbj|BAE87275.1| unnamed protein product [Macaca fascicularis]
Length = 157
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +D + ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDIIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 148
>gi|290997001|ref|XP_002681070.1| polyubiquitin [Naegleria gruberi]
gi|284094693|gb|EFC48326.1| polyubiquitin [Naegleria gruberi]
Length = 153
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +KRK++ IP Q L +G +L DG + DY I K+ T
Sbjct: 10 GKTITLEVESNDSIENVKRKVQDKEGIPPEQQRLIYAGKQLEDGRTINDYNIQKDST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K I+++ DTV ++K+KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQLFVKTLTGNTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
++G +L+D R +S+Y +++ S + + L+
Sbjct: 121 YAGKQLED-GRTISDYNLQKDSTVHLVLR 148
>gi|388516797|gb|AFK46460.1| unknown [Medicago truncatula]
Length = 153
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGI-REFS 149
F+G +L+D R L++Y I +EF+
Sbjct: 120 IFAGKQLEDG-RTLADYNIQKEFT 142
>gi|283245864|gb|ABH10622.2| ubiquitin [Nicotiana tabacum]
Length = 143
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 8 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 65
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 66 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 118
Query: 127 FFSGIELDDEFRNLSEYGIREFSEI 151
F+G +L+D R L++Y I++ S +
Sbjct: 119 IFAGKQLED-GRTLADYNIQKESTL 142
>gi|319996466|dbj|BAJ61942.1| ubiquitin [Nymphaea hybrid cultivar]
Length = 146
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
F+G +L+D R L++Y I++ S
Sbjct: 120 IFAGKQLED-GRTLADYNIQKES 141
>gi|428164090|gb|EKX33130.1| ubiquitin [Guillardia theta CCMP2712]
Length = 153
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ +K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVLR 148
>gi|385881402|gb|AFI98422.1| polyubiquitin-B, partial [Antricola delacruzi]
Length = 156
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 8 NGHEFVLEVGLQEPVLE-IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTK 66
G LEV +E +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 11 TGKTITLEVEPGSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST- 69
Query: 67 IDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRML 125
L + I +K + ++V+ +DT+ ++K KI +G P +
Sbjct: 70 --------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQR 121
Query: 126 LFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
L F+G +L+D R LS+Y I++ S + + L+
Sbjct: 122 LIFAGKQLED-GRTLSDYNIQKESTLHLVLR 151
>gi|123444806|ref|XP_001311170.1| Ubiquitin family protein [Trichomonas vaginalis G3]
gi|121892969|gb|EAX98240.1| Ubiquitin family protein [Trichomonas vaginalis G3]
Length = 539
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 26/240 (10%)
Query: 16 VGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDY--PIVKEGTKIDLTINP 73
+ L + + K K+++ IPA Q L + + L + +E Y PI K+ L ++
Sbjct: 138 INLNTTIKDFKLKLQKESGIPANKQLLYLGNFLLPNSGTLEKYLSPIKKDNVGARLCLHD 197
Query: 74 FLQSSFNQHDKIHIIIKFPSRKFNIDVDRTD-TVRSLKEKIHIIDGTPIKRMLLFFSGIE 132
+ SFN+ I+ P ID+D + TV LKEK + G PIK + ++GI
Sbjct: 198 GIAISFNK-------IQVP-----IDIDDFNITVEKLKEKFYSKTGWPIKYQTMTYNGII 245
Query: 133 LDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQD 192
+DD R L+ Y I+ S + ++ + D + + ++ T +L+ A I
Sbjct: 246 MDDN-RTLNYYKIQRGS--VNEVRIQYDISDLKGGQCIYIRLITVKTLVLYADIW----- 297
Query: 193 SSTVNELRHLLLSSK-ILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRGG 251
+STV +L+ L+ S+ I PR+ ++ +R + DN L + ++ +Y+ + V RGG
Sbjct: 298 NSTVFDLKLLICDSEGIFPRDQDLYYGGERHLEDNFKLIDYDIQRDSTIYLSR--VMRGG 355
>gi|10121776|gb|AAG13367.1| polyprotein [bovine viral diarrhea virus type 2]
Length = 636
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L ++G +L DG + Y I KE T
Sbjct: 363 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLILAGKQLEDGRTLSAYKIQKEST-- 420
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 421 -------LYLGLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPGQKRL 473
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPP 166
F + +D R LS+Y I++ S + +FL RLR P
Sbjct: 474 IFPANKREDA-RTLSDYNIQKESTLHLFL----RLRGGGP 508
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 33/244 (13%)
Query: 1 MRIIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPI 60
M++++V N EVG E + + R IP Q L +G +L DG + DY I
Sbjct: 289 MKLLMVGN---LGAEVGDLEHLGWVLR------GIPPDQQRLIFAGKQLEDGRTLSDYNI 339
Query: 61 VKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGT 119
KE T L + I +K + ++V+ +DT+ ++K KI +G
Sbjct: 340 QKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 390
Query: 120 PIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSS 179
P + L +G +L+D R LS Y I++ S + + L RL +Q
Sbjct: 391 PPDQQRLILAGKQLEDG-RTLSAYKIQKESTLYLGL-------------RLRGGMQIFVK 436
Query: 180 LLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDI 239
L G +I LE++ S T+ ++ + + +P I D +L + ++
Sbjct: 437 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPGQKRLIFPANKREDARTLSDYNIQKEST 496
Query: 240 LYVF 243
L++F
Sbjct: 497 LHLF 500
>gi|357151131|ref|XP_003575690.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin 4-like [Brachypodium
distachyon]
Length = 380
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 108/235 (45%), Gaps = 14/235 (5%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G L V + V ++K KI + Q L G ++ D + DY I + G +D
Sbjct: 156 GGTITLNVESTDTVNDVKVKIYEKDGTRPIQQRLIFCGKQMEDDRTLADYNI-ENGRTLD 214
Query: 69 LTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFF 128
+ + LQ +I+++ ++VD DT+ +K KI + +G P + L F
Sbjct: 215 VKLK--LQGGRYAM-QIYVMETRARWTIALEVDSLDTIDEVKSKIQVKEGFPKVQQCLIF 271
Query: 129 SGIELDDEFRNLSEYGI-REFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
+LDD L+++ I RE + ++V L+ P R + ++ + ++G IP
Sbjct: 272 DNKQLDDGKFTLADHNIWRESTILLVLLQP-------SPTRGTTMRICVRT--MDGKEIP 322
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S TV++++ + IH+ + D+ +L + +E G I+YV
Sbjct: 323 LDVESSDTVDDVKMKIYEKDGTRPVQQRLIHEGIRLLDDYTLADYEIEKGSIIYV 377
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDG-LDMEDYPIVKEGTK 66
G LEV + + E+K KI+ P Q L +L DG L + D+ I KE T
Sbjct: 83 QGRTITLEVDSLDTIDEVKSKIQVKEGFPKGQQCLIFGNKQLEDGELTLADHNIWKESTI 142
Query: 67 IDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGT-PIKRML 125
+ + F+Q+ ++V+ TDTV +K KI+ DGT PI++ L
Sbjct: 143 LLVLKXIFVQT-------------MRGGTITLNVESTDTVNDVKVKIYEKDGTRPIQQRL 189
Query: 126 LFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
+ F G +++D+ R L++Y I + V LK
Sbjct: 190 I-FCGKQMEDD-RTLADYNIENGRTLDVKLK 218
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 33/192 (17%)
Query: 53 LDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEK 112
L + DY I + G+ +DL + +I+++ + R ++VD DT+ +K K
Sbjct: 55 LTLADYNI-EHGSTLDL----------QEKMQIYVMRRKQGRTITLEVDSLDTIDEVKSK 103
Query: 113 IHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSF 172
I + +G P + L F +L+D L+++ I + S I++ LK +
Sbjct: 104 IQVKEGFPKGQQCLIFGNKQLEDGELTLADHNIWKESTILLVLKXIF------------- 150
Query: 173 KVQTSSSLLNGASIPLEMQDSSTVNELR-HLLLSSKILP-REDYIFIHKQRIMRDNCSLR 230
VQT + G +I L ++ + TVN+++ + P ++ IF KQ M D+ +L
Sbjct: 151 -VQT----MRGGTITLNVESTDTVNDVKVKIYEKDGTRPIQQRLIFCGKQ--MEDDRTLA 203
Query: 231 WHGVEYGDILYV 242
+ +E G L V
Sbjct: 204 DYNIENGRTLDV 215
>gi|323716602|gb|ADY05179.1| ubiquitin [Acipenser persicus]
Length = 132
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 13 VLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTIN 72
LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 1 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST------- 53
Query: 73 PFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGI 131
L + I +K + ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 54 --LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 111
Query: 132 ELDDEFRNLSEYGIREFS 149
+L+D R LS+Y I++ S
Sbjct: 112 QLED-GRTLSDYNIQKES 128
>gi|380026660|ref|XP_003697063.1| PREDICTED: polyubiquitin-A-like, partial [Apis florea]
Length = 130
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 3 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGG 53
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 54 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 112
Query: 144 GIREFSEIIVFLK 156
I++ S + + L+
Sbjct: 113 NIQKESTLHLVLR 125
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 108 SLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPI 167
++K KI +G P + L F+G +L+D R LS+Y I++ S + + L
Sbjct: 2 NVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVL------------ 48
Query: 168 RRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNC 227
RL +Q L G +I LE++ S T+ ++ + + +P + I + + D
Sbjct: 49 -RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 107
Query: 228 SLRWHGVEYGDILYV 242
+L + ++ L++
Sbjct: 108 TLSDYNIQKESTLHL 122
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT 65
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 62 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 119
>gi|339232958|ref|XP_003381596.1| ubiquitin family protein [Trichinella spiralis]
gi|316979574|gb|EFV62350.1| ubiquitin family protein [Trichinella spiralis]
Length = 152
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 20 VKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGG 70
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DTV ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 71 MQIFVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIPPDQQRLIFAGKQLEDS-RTLSDY 129
Query: 144 GIREFSEIIVFLK 156
I++ S + + L+
Sbjct: 130 NIQKESTLHLVLR 142
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 91 FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSE 150
+P+++ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S
Sbjct: 2 YPAKRSRGKWIPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKEST 60
Query: 151 IIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILP 210
+ + L RL +Q L G +I LE++ S TV ++ + + +P
Sbjct: 61 LHLVL-------------RLRGGMQIFVKTLTGKTITLEVEPSDTVENVKGKIQDKEGIP 107
Query: 211 REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ I + + D+ +L + ++ L++
Sbjct: 108 PDQQRLIFAGKQLEDSRTLSDYNIQKESTLHL 139
>gi|357116845|ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
L40-like [Brachypodium distachyon]
Length = 213
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L +G + D I KE T
Sbjct: 10 GKTITLEVESSDIIDNVKTKIQDKEGIPPEQQRLIFAGKQLDNGRTLADCNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L ++ I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLQGRMXIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +LDD R L++Y I++ S + + L+
Sbjct: 121 FAGKQLDD-GRTLADYNIQKESTLHLVLR 148
>gi|281203713|gb|EFA77909.1| ubiquitin/ribosomal protein S27a fusion protein [Polysphondylium
pallidum PN500]
Length = 167
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 19 TGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 76
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I IK + K + V+ +D++ ++K KI +G P + L
Sbjct: 77 -------LHLVLRLRGGMEIFIKSLTGKIITLKVEDSDSIENVKSKIQEKEGIPPDQQRL 129
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFL 155
F G LDD R LS+Y I++ S +I F+
Sbjct: 130 IFVGRILDD-GRTLSDYNIQKESTLIWFV 157
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 79 FNQHDKIHIIIK-----FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIEL 133
+ +KI +I++ + ++V+ +DT+ ++K KI +G P + L F+G +L
Sbjct: 1 MSHKEKIKLIMQIFVKTLTGKTITLEVEGSDTIENVKTKIQDKEGIPPDQQRLIFAGKQL 60
Query: 134 DDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDS 193
+D R LS+Y I++ S + + L RLR I S L G I L+++DS
Sbjct: 61 ED-GRTLSDYNIQKESTLHLVL----RLRGGMEIFIKS---------LTGKIITLKVEDS 106
Query: 194 STVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVF 243
++ ++ + + +P + I RI+ D +L + ++ L F
Sbjct: 107 DSIENVKSKIQEKEGIPPDQQRLIFVGRILDDGRTLSDYNIQKESTLIWF 156
>gi|145495350|ref|XP_001433668.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400787|emb|CAK66271.1| unnamed protein product [Paramecium tetraurelia]
Length = 154
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V ++ + +K KI+ IP Q L +G +L DG ++DY I KE T
Sbjct: 10 TGKTITLDVKSEDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLQDYNIQKEST-- 67
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ T+ +K KI +G P + L
Sbjct: 68 -------LHLVLRLRGGMQIFVKNLSGKTITLDVEPDQTIDMIKSKIQDKEGIPPDQQRL 120
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L +Y I++ S I + L+
Sbjct: 121 IFAGKQLED-GRTLGDYNIQKESTIHLVLR 149
>gi|224096634|ref|XP_002310680.1| predicted protein [Populus trichocarpa]
gi|222853583|gb|EEE91130.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 83/157 (52%), Gaps = 16/157 (10%)
Query: 95 KFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVF 154
K ++VD +DT+ S+K KI +G P ++ LFF+G L+D R L++Y I++ S + +
Sbjct: 7 KNTLEVDSSDTIDSVKAKIQDKEGIPPDQLRLFFAGKRLED-GRTLADYNIQKGSTLHLN 65
Query: 155 LKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDY 214
L RLR I KV+T L G I ++++ + T++ ++ + + +P
Sbjct: 66 L----RLRGGTMI-----KVKT----LTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQ 112
Query: 215 IFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSRGG 251
I+ + + D+ + R + +E G +L++ RGG
Sbjct: 113 RLIYAGKQLGDDKTARDYNIEGGSVLHLV--LALRGG 147
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 1 MRIIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPI 60
M+II+ N LEV + + +K KI+ IP L +G L DG + DY I
Sbjct: 1 MQIIVGKN----TLEVDSSDTIDSVKAKIQDKEGIPPDQLRLFFAGKRLEDGRTLADYNI 56
Query: 61 VKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGT 119
K T L +N L+ I +K ++ ID++ TDT+ +KE++ +G
Sbjct: 57 QKGST---LHLNLRLRGG------TMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGI 107
Query: 120 PIKRMLLFFSGIELDDEFRNLSEYGIREFS 149
P + L ++G +L D+ + +Y I S
Sbjct: 108 PPVQQRLIYAGKQLGDD-KTARDYNIEGGS 136
>gi|290984552|ref|XP_002674991.1| polyubiquitin [Naegleria gruberi]
gi|284088584|gb|EFC42247.1| polyubiquitin [Naegleria gruberi]
Length = 153
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +KRK++ +P Q L +G +L DG DY I K+ T
Sbjct: 10 GKTITLEVESNDSIENVKRKVQDKEGVPPEQQRLIYAGKQLEDGRTFNDYNIQKDST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K + I+ + DT+ ++K+KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQLFVKTLTGKTITIETESNDTIENMKQKIFDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
++G +L+D R +S+Y +++ S + + L+
Sbjct: 121 YAGKQLED-GRTISDYNLQKDSTVHLVLR 148
>gi|255581246|ref|XP_002531435.1| conserved hypothetical protein [Ricinus communis]
gi|223528954|gb|EEF30947.1| conserved hypothetical protein [Ricinus communis]
Length = 158
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 14 LEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINP 73
LE+ L + E+KR+IE F++ QTL L D + Y +E T ++L++ P
Sbjct: 14 LEMPLNATIYELKREIEARFDVEVAKQTLCHGDVVLEDDSSIGSYNF-EELTNLELSVTP 72
Query: 74 FLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIEL 133
K I++ +++ ++V T TV LKEK+ G + L + E+
Sbjct: 73 DHAPPLAP--KFSILVCSCTKEMEVNVRETHTVAHLKEKLERRWGVFHGNISLIHASREM 130
Query: 134 DDEFRNLSEYGIREFSEI 151
+D+ LSEYG+ E SEI
Sbjct: 131 EDDDHTLSEYGVSEGSEI 148
>gi|290997019|ref|XP_002681079.1| polyubiquitin [Naegleria gruberi]
gi|284094702|gb|EFC48335.1| polyubiquitin [Naegleria gruberi]
Length = 153
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L DG + DY I K+ T
Sbjct: 10 GKTITLEVESNDSIENVKSKIQDKEGIPPEQQRLIYAGKQLEDGRTINDYNIQKDST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K + I+++ DTV ++K+KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
++G +L+D R +S+Y +++ S + + L+
Sbjct: 121 YAGKQLED-GRTISDYNLQKDSTVHLVLR 148
>gi|242034699|ref|XP_002464744.1| hypothetical protein SORBIDRAFT_01g026250 [Sorghum bicolor]
gi|241918598|gb|EER91742.1| hypothetical protein SORBIDRAFT_01g026250 [Sorghum bicolor]
Length = 353
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 91 FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSE 150
F R + I+V +DTV SLK K+ ++ P K L G +L+D + LS+Y I EF+
Sbjct: 8 FAGRHYTIEVQSSDTVDSLKAKVEELEAVPAKLQRLLVGGYQLEDGHK-LSKYKIVEFAT 66
Query: 151 IIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELR 200
+ + L+ ++ R P VQT +S +I L++Q S TV ++R
Sbjct: 67 VHLVLRLLS-CRQCPSSTDRYIYVQTRTS----NTIALQVQPSDTVTDVR 111
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 36/237 (15%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-KI 67
G + +EV + V +K K+E++ +PA Q L V G++L DG + Y IV+ T +
Sbjct: 10 GRHYTIEVQSSDTVDSLKAKVEELEAVPAKLQRLLVGGYQLEDGHKLSKYKIVEFATVHL 69
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + Q + I++ + S + V +DTV +++ I LF
Sbjct: 70 VLRLLSCRQCPSSTDRYIYVQTR-TSNTIALQVQPSDTVTDVRKNIS-------GHQSLF 121
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
+G L D+ Y I+ N L F +Q NG +
Sbjct: 122 LAGNRLQDDRTFGYYYQIQ-----------------NDATLHLDFGMQIFVKTFNGKTST 164
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIF----IHKQRIMRDNCSLRWHGVEYGDIL 240
LE+ S TV +++ +K+L ++ IF + QR + +C ++ H + D+
Sbjct: 165 LEVDPSDTVGDVK-----AKMLDQQKIIFDGSRLDDQRKL-GSCKVQNHSTLHLDLC 215
>gi|92790176|emb|CAI83757.1| Polyubiqutin 4 [Polyplastron multivesiculatum]
Length = 177
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 34 GKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST--- 90
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 91 ------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIDNVKAKIQDKEGIPPDQQRLI 144
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 145 FAGKQLEDN-RTLADYNIQKESTLHLVLR 172
>gi|323457057|gb|EGB12923.1| ubiquitin [Aureococcus anophagefferens]
Length = 250
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 14/233 (6%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I I G L+V + + +K+KIE IP Q L G +L DG + DY
Sbjct: 1 MQIFIKTLTGKIITLDVDPPDTIANVKQKIEDKEGIPPDRQRLIFCGRQLEDGPTLIDYN 60
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I K+ T L I +K + +DV+ +DT+ ++K+KI +G
Sbjct: 61 IQKQST---------LHLVLRLGGPPQIFVKTLTGKTITLDVEPSDTIGNVKQKIQDKEG 111
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMN--RLRDNPPIRRLSFKVQT 176
P + L F G + +D R LS+ I +S + + L+ + S Q
Sbjct: 112 IPSDQQRLIFKGKQFEDG-RTLSDCSILNYSTLHLVLRLLKEPEREPESEPEPESELEQI 170
Query: 177 SSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSL 229
L G +I L ++ S T+ ++ + + +P + I K + D +L
Sbjct: 171 VVKTLTGKTITLVVEPSDTIGNVKQKIQDKEGIPPDQQRLIFKGKQFEDGLTL 223
>gi|339232996|ref|XP_003381615.1| ubiquitin family protein [Trichinella spiralis]
gi|316979549|gb|EFV62331.1| ubiquitin family protein [Trichinella spiralis]
Length = 189
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 26 KRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKI 85
K KI+ IP Q L +G +L DG + DY I KE T L +
Sbjct: 25 KGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGM 75
Query: 86 HIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYG 144
I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 76 QIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYN 134
Query: 145 IREFSEIIVFLKTMNRLRD 163
I++ S + + L+ +R+
Sbjct: 135 IQKESTLHLVLRLRGGMRN 153
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 87 IIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIR 146
I + P + V +D++ + K KI +G P + L F+G +L+D R LS+Y I+
Sbjct: 2 IGLAHPEGQRRALVHPSDSIENEKGKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQ 60
Query: 147 EFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSS 206
+ S + + L RL +Q L G +I LE++ S T+ ++ +
Sbjct: 61 KESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDK 107
Query: 207 KILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + D +L + ++ L++
Sbjct: 108 EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 143
>gi|91081107|ref|XP_975512.1| PREDICTED: similar to ubiquitin C [Tribolium castaneum]
gi|270005296|gb|EFA01744.1| hypothetical protein TcasGA2_TC007341 [Tribolium castaneum]
Length = 149
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 1 MRIIIVANGHEFV-LEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + + E + L+V + + +K++I+ IPA Q + G+ L D L + DY
Sbjct: 1 MQIFVESQTGEIITLQVHPADTIESVKQQIQNEKGIPADQQKMIHRGYPLEDSLTLVDYN 60
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I +E T L + ++Q I +K ++VD ++T+ +LK KI G
Sbjct: 61 IKEEST---LYLKNYIQ----------IFVKTLNGETITLEVDPSETIENLKAKIQDQQG 107
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMN 159
P L F+G +L+D F LS+Y I++ S + LK N
Sbjct: 108 VPPNLQRLIFAGQQLEDGF-TLSDYNIQDESIVRFVLKLFN 147
>gi|347966900|ref|XP_321092.3| AGAP001969-PA [Anopheles gambiae str. PEST]
gi|333469849|gb|EAA01267.4| AGAP001969-PA [Anopheles gambiae str. PEST]
Length = 309
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 111/238 (46%), Gaps = 28/238 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G ++ + V +K++I++ IP Q + +G +L DG +++Y I+K G+ I
Sbjct: 9 TGKTIAVDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIK-GSTI 67
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + L+ + I +K + K +D + TV S+K++I + P + +
Sbjct: 68 HLVLR--LKGG------MQIFVKMLTGKTIAVDTEPEATVESVKKQIDEREEIPPNQQRM 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L EY I + S + + L RL +Q +L G +I
Sbjct: 120 IFAGKQLED-GRQLQEYSIIKGSTVHLVL-------------RLKGGMQIFVKMLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
++ + +TV ++ + + +P ++ IF KQ + D L+ + + G +++
Sbjct: 166 AVDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQ--LEDGRQLQEYSIIKGSTVHL 221
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G ++ + V +K++I++ IP Q + +G +L DG +++Y I+K G+ +
Sbjct: 161 TGKTIAVDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQLEDGRQLQEYSIIK-GSTV 219
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + L+ + I +K + K +D + TV S+K++I + P + +
Sbjct: 220 HLVLR--LKGG------MQIFVKMLTGKTIAVDTEPEATVESVKKQIDEREEIPPNQQRM 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLR 162
F+G +L+D R L EY I + S + + L+ L+
Sbjct: 272 IFAGKQLED-GRQLQEYSIIKGSTVHLVLRLKGGLQ 306
>gi|301617753|ref|XP_002938291.1| PREDICTED: ubiquitin-like [Xenopus (Silurana) tropicalis]
Length = 153
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCRSLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L +Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GRTLCDYNIQKESTLHLVLR 148
>gi|403284842|ref|XP_003933761.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 1
[Saimiri boliviensis boliviensis]
Length = 153
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
LEV + + +K KI+ IP Q L + +L DG ++ DY I KE T
Sbjct: 13 ITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDYNIQKEST------ 66
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K S+ ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 67 ---LHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 123
Query: 131 IELDDEFRNLSEYGIREFS 149
+L+D R LS+Y I++ S
Sbjct: 124 KQLED-GRTLSDYNIQKES 141
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
S+ ++V+ +DT++++K KI +G P + L F+ +L+D RNLS+Y I++ S +
Sbjct: 10 SKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLED-GRNLSDYNIQKESTLH 68
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRE 212
+ L RL +Q L +I LE++ S T+ ++ + + +P +
Sbjct: 69 LIL-------------RLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPD 115
Query: 213 DYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ IL++
Sbjct: 116 QQRLIFAGKQLEDGRTLSDYNIQKESILHL 145
>gi|397527146|ref|XP_003833462.1| PREDICTED: LOW QUALITY PROTEIN: polyubiquitin-like [Pan paniscus]
Length = 153
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + +K KI+ P Q L +G +L DG + DY I KE T
Sbjct: 9 TGKIITLEVEPSATIENVKAKIQDKEGNPHDQQKLIFAGKQLEDGCSLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDEEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 120 IFAGKKLED-GRTLSDYSIQKESTLHLVLR 148
>gi|361584485|gb|AEW12065.1| polyubiquitin, partial [Drosophila melanogaster]
gi|361584487|gb|AEW12066.1| polyubiquitin, partial [Drosophila melanogaster]
gi|361584489|gb|AEW12067.1| polyubiquitin, partial [Drosophila melanogaster]
gi|361584501|gb|AEW12073.1| polyubiquitin, partial [Drosophila melanogaster]
Length = 231
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ P Q L G L +G + DY I KE T
Sbjct: 10 GKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
+ + I +K + ++V+ +DT+ ++K KI + P + L
Sbjct: 67 ------IYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F+G L++ R LS+Y I++ S I + L RL +Q L G +I
Sbjct: 121 FAGKHLEN-GRTLSDYNIQKESTIYLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ P Q L +G L +G + DY I KE T
Sbjct: 86 GKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFAGKHLENGRTLSDYNIQKEST--- 142
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
+ + I +K + ++V+ +D++ ++K +IH +G P + L
Sbjct: 143 ------IYLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLI 196
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 197 FAGKQLED-GRTLSDYNIQKESTLHLVLR 224
>gi|353230196|emb|CCD76367.1| putative ubiquitin (ribosomal protein L40) [Schistosoma mansoni]
Length = 247
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIRE 147
F+G +L+D R LS+ I+E
Sbjct: 120 IFAGKQLEDG-RTLSDLHIQE 139
>gi|403352030|gb|EJY75518.1| Polyubiquitin-C [Oxytricha trifallax]
Length = 385
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G +EV L + + I+ KI+ +P L G +L DG + DY + KE T
Sbjct: 85 TGKTITIEVELDDTIECIRAKIQDKPGMPPDHIRLVFGGKKLQDGKILSDYGLQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
+ + I +K R ++V++ +++ S++ K+ +G P ++ L
Sbjct: 143 -------IHMVLRLRGGMQIFVKALTGRTITLEVEQDESIESIRAKLQDKEGIPPDQLRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F G EL + L +YGI++ S I L RLR ++ V+T L+G +
Sbjct: 196 IFGGKEL-LVGKTLKDYGIQKESTIFTVL----RLRGG-----MNIYVKT----LSGKTK 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE+++S ++ +R +L +P + + +++ D L + ++ L++
Sbjct: 242 TLEVEESDSIEIIREKILDKGWVPPDQVRLVFNGKLLEDGRYLSDYNIQNESTLHL 297
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 25/237 (10%)
Query: 1 MRIIIVA-NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + A G LEV E + I+ K++ IP L G EL+ G ++DY
Sbjct: 153 MQIFVKALTGRTITLEVEQDESIESIRAKLQDKEGIPPDQLRLIFGGKELLVGKTLKDYG 212
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIKFPSRKF-NIDVDRTDTVRSLKEKIHIIDG 118
I KE T + + ++I +K S K ++V+ +D++ ++EKI
Sbjct: 213 IQKEST---------IFTVLRLRGGMNIYVKTLSGKTKTLEVEESDSIEIIREKILDKGW 263
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSS 178
P ++ L F+G L+D R LS+Y I+ S + + LK L +Q +
Sbjct: 264 VPPDQVRLVFNGKLLED-GRYLSDYNIQNESTLHLVLK-------------LRIGMQIHA 309
Query: 179 SLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
L G ++ L + ++ + ++ ++ + + +P + I + + D +L + ++
Sbjct: 310 KTLGGKTLTLPVDENEPIENIKAMIQNKEGIPADQLRLIIGAKQLEDGKTLSDYNIQ 366
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 27/238 (11%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKI-EQIFNIPATSQTLAVSGWELVDGLDMEDY 58
M+I + + NG + ++V + + +K+KI E++ +P LA G L + ++DY
Sbjct: 1 MQIFVKIVNGKTYAIDVDESDTIAMVKQKIQEKVVTLP-DPLWLAFGGKFLDNKKTIKDY 59
Query: 59 PIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIID 117
I + T L N + I ++ + I+V+ DT+ ++ KI
Sbjct: 60 NIGNQST---------LYQVLNLKGGVQIFVRTLTGKTITIEVELDDTIECIRAKIQDKP 110
Query: 118 GTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTS 177
G P + L F G +L D + LS+YG+++ S I + L RL +Q
Sbjct: 111 GMPPDHIRLVFGGKKLQD-GKILSDYGLQKESTIHMVL-------------RLRGGMQIF 156
Query: 178 SSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
L G +I LE++ ++ +R L + +P + I + + +L+ +G++
Sbjct: 157 VKALTGRTITLEVEQDESIESIRAKLQDKEGIPPDQLRLIFGGKELLVGKTLKDYGIQ 214
>gi|323208|gb|AAA42855.1| nonstructural protein; putative helicase/protease; contains
duplication; contains ubiquitin-coding region; putative,
partial [Bovine viral diarrhea virus 1]
Length = 1896
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 35 IPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPS 93
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 949 IPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQIFVKTLTG 999
Query: 94 RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIV 153
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S + +
Sbjct: 1000 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHL 1058
Query: 154 FLKTMNRLRDNPP 166
L RLR P
Sbjct: 1059 VL----RLRGGGP 1067
Score = 39.3 bits (90), Expect = 1.6, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 990 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 1049
Query: 60 IVKEGTKIDLTI-----NPFLQSSFNQHDKIHIII 89
I KE T + L + P + +H++ H+ I
Sbjct: 1050 IQKEST-LHLVLRLRGGGPAVCKKITEHERCHVNI 1083
>gi|62079638|gb|AAX61165.1| ubiquitin [Oreochromis mossambicus]
Length = 160
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI + P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEAFPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIRE 147
F+G +L+D R LS+Y I++
Sbjct: 120 IFAGKQLED-GRTLSDYNIQK 139
>gi|403284846|ref|XP_003933763.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 3
[Saimiri boliviensis boliviensis]
Length = 153
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
LEV + + +K KI+ IP Q L + +L DG ++ DY I KE T
Sbjct: 13 ITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLEDGRNLSDYNIQKEST------ 66
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K S+ ++V+ +DT+ ++K KI +G P + L F+G
Sbjct: 67 ---LHLILRLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 123
Query: 131 IELDDEFRNLSEYGIREFS 149
+L+D R LS+Y I++ S
Sbjct: 124 KQLED-GRTLSDYNIQKES 141
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 14/150 (9%)
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
S+ ++V+ +DT++++K KI +G P + L F+ +L+D RNLS+Y I++ S +
Sbjct: 10 SKTITLEVEPSDTIKNVKAKIQDKEGIPPDQQRLIFARKQLED-GRNLSDYNIQKESTLH 68
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRE 212
+ L RL +Q L +I LE++ S T+ ++ + + +P +
Sbjct: 69 LIL-------------RLRGGMQIFVKTLTSKTITLEVEPSDTIENVKAKIQDKEGIPPD 115
Query: 213 DYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + D +L + ++ IL++
Sbjct: 116 QQRLIFAGKQLEDGRTLSDYNIQKESILHL 145
>gi|358060688|dbj|GAA93627.1| hypothetical protein E5Q_00271 [Mixia osmundae IAM 14324]
Length = 1022
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 259 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 318
Query: 60 IVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDG 118
I + + T+ L+ + I +K + ++V+ +DT+ ++K KI +G
Sbjct: 319 IRRS---LPSTLVLRLRGG------MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG 369
Query: 119 TPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
P + L F+G +L+D R LS+Y I++ S + + L+
Sbjct: 370 IPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLR 406
>gi|361584491|gb|AEW12068.1| polyubiquitin, partial [Drosophila melanogaster]
Length = 231
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ P Q L G L +G + DY I KE T
Sbjct: 10 GKTITLEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
+ + I +K + ++V+ +DT+ ++K KI + P + L
Sbjct: 67 ------IYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F G L++ R LS+Y I++ S I + L RL +Q L G +I
Sbjct: 121 FGGKHLEN-GRTLSDYNIQKESTIYLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|361584493|gb|AEW12069.1| polyubiquitin, partial [Drosophila melanogaster]
gi|361584497|gb|AEW12071.1| polyubiquitin, partial [Drosophila melanogaster]
Length = 231
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ P Q L G L +G + DY I KE T
Sbjct: 10 GKTITLEVEPSDTIKNVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
+ + I +K + ++V+ +DT+ ++K KI + P + L
Sbjct: 67 ------IYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F G L++ R LS+Y I++ S I + L RL +Q L G +I
Sbjct: 121 FGGKHLEN-GRTLSDYNIQKESTIYLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|125554110|gb|EAY99715.1| hypothetical protein OsI_21697 [Oryza sativa Indica Group]
Length = 304
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 22 VLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSF-- 79
V+EIK+K+E + IP T+Q L EL D D+E YPI +G+ + L ++ + + F
Sbjct: 28 VVEIKQKVESCYGIPVTAQCLLYWNRELADDYDIEYYPIF-DGSHVLLLLHWQVAARFCW 86
Query: 80 -----------NQHDKIHIIIKFP----SRKFNIDVDRTDTVRSLKEKIH 114
HD +H+ P RK + R ++V +LK +IH
Sbjct: 87 IHGLAKWSGGDTTHDMVHVTAYLPPASWGRKVTVFARREESVAALKRRIH 136
>gi|170034791|ref|XP_001845256.1| ubiquitin [Culex quinquefasciatus]
gi|167876386|gb|EDS39769.1| ubiquitin [Culex quinquefasciatus]
Length = 154
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + IK KIE IP Q L +G +L DG + DY V++G+ +
Sbjct: 9 TGKTITLDVEPVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYN-VQKGSTL 67
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKI-HIIDGTPIKRML 125
L + L+ F I +K R F +D+++ DTV +LK+++ ++ P +
Sbjct: 68 HLVLR--LRGGF------QIFVKMLTGRCFTVDIEQEDTVDTLKQRVSERLEEMPANQCR 119
Query: 126 LFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
L F+G +L+D R + EY + + S + + L+
Sbjct: 120 LIFAGKQLEDG-RTVGEYSVIKGSTLHLVLR 149
>gi|92790162|emb|CAI83750.1| Polyubiqutin 4 [Isotricha prostoma]
Length = 143
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 12 FVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
L+V + + +K KI+ IP Q L +G +L D + DY I KE T
Sbjct: 3 ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDNRTLADYNIQKEST------ 56
Query: 72 NPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG 130
L + I +K + +DV+ +DT+ ++K KI +G P + L F+G
Sbjct: 57 ---LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 113
Query: 131 IELDDEFRNLSEYGIREFSEIIVFLK 156
+L+D R L++Y I++ S + + L+
Sbjct: 114 KQLEDN-RTLADYNIQKESTLHLVLR 138
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 94 RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIV 153
+ +DV+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S + +
Sbjct: 1 KTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDN-RTLADYNIQKESTLHL 59
Query: 154 FLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPRED 213
L RL +Q L G +I L+++ S T+ ++ + + +P +
Sbjct: 60 VL-------------RLRGGMQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQ 106
Query: 214 YIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I + + DN +L + ++ L++
Sbjct: 107 QRLIFAGKQLEDNRTLADYNIQKESTLHL 135
>gi|5523987|gb|AAD44046.1|AF104029_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 28 KIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHI 87
KI+ IP Q L +G +L DG + DY I KE T L + I
Sbjct: 215 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQI 265
Query: 88 IIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIR 146
+K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I+
Sbjct: 266 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQ 324
Query: 147 EFSEIIVFLKTMNRLRDNPP 166
+ S + + L RLR P
Sbjct: 325 KESTLHLVL----RLRGGGP 340
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T +
Sbjct: 271 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-L 329
Query: 68 DLTI-----NPFLQSSFNQHDKIHIII 89
L + P + H+K H+ I
Sbjct: 330 HLVLRLRGGGPAVCKKITNHEKCHVSI 356
>gi|361584495|gb|AEW12070.1| polyubiquitin, partial [Drosophila melanogaster]
Length = 231
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ P Q L G L +G + DY I KE T
Sbjct: 10 GKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
+ + I +K + ++V+ +DT+ ++K KI + P + L
Sbjct: 67 ------IYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F G L++ R LS+Y I++ S I + L RL +Q L G +I
Sbjct: 121 FGGKHLEN-GRTLSDYNIQKESTIYLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|118793820|ref|XP_321091.3| AGAP001970-PA [Anopheles gambiae str. PEST]
gi|116115995|gb|EAA01176.4| AGAP001970-PA [Anopheles gambiae str. PEST]
Length = 236
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 28/230 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V E VL+IK KIEQ I Q + +G +L DG + DY I + G+ +
Sbjct: 9 TGKTITLDVIASETVLDIKSKIEQREGIAPDQQRIIFAGKQLDDGRIISDYNI-QHGSTM 67
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + L+ + I ++ + K ID + TV S+K++I + P + +
Sbjct: 68 HLVLR--LKGG------MQIFVRMLTGKTIAIDTEPEATVESVKKQIDEREEIPPNQQRM 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L EY I + S I + L RL +Q +L G +I
Sbjct: 120 IFAGKQLED-GRQLQEYSIIKASTIHLVL-------------RLKGGMQIFVRMLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQRIMRDNCSLRWHGV 234
++ + +TV ++ + + +P ++ IF KQ + D L+ + +
Sbjct: 166 AVDTEPEATVESVKKQIDEREEIPPNQQRMIFAGKQ--LEDGRQLQEYSI 213
>gi|30983942|gb|AAP40646.1| putative polyubiquitin [Gossypium barbadense]
Length = 134
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 7 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGG 57
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT ++K KI +G P + L F+G EL+D R L++Y
Sbjct: 58 MQIFVKTLTGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKELED-GRTLADY 116
Query: 144 GIREFSEIIVFLK 156
I++ S + + L+
Sbjct: 117 NIQKESTLHLVLR 129
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 103 TDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLR 162
DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S + + L
Sbjct: 1 ADTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHLVL------- 52
Query: 163 DNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRI 222
RL +Q L G +I LE++ S T + ++ + + +P + I +
Sbjct: 53 ------RLRGGMQIFVKTLTGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKE 106
Query: 223 MRDNCSLRWHGVEYGDILYVFKGTVSRGGY 252
+ D +L + ++ L++ RGG+
Sbjct: 107 LEDGRTLADYNIQKESTLHLV--LRLRGGF 134
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 27/58 (46%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT 65
G LEV + +K KI+ IP Q L +G EL DG + DY I KE T
Sbjct: 66 TGKTITLEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKELEDGRTLADYNIQKEST 123
>gi|452113248|gb|AGG08881.1| ubiquitin, partial [Rana clamitans]
Length = 126
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 9 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGG 59
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 60 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDY 118
Query: 144 GIREFS 149
I++ S
Sbjct: 119 NIQKES 124
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 14/133 (10%)
Query: 103 TDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLR 162
+DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S + + L
Sbjct: 3 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVL------- 54
Query: 163 DNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRI 222
RL +Q L G +I LE++ S T+ ++ + + +P I +
Sbjct: 55 ------RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ 108
Query: 223 MRDNCSLRWHGVE 235
+ D +L + ++
Sbjct: 109 LEDGRTLSDYNIQ 121
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT 65
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 69 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKEST 125
>gi|195164961|ref|XP_002023314.1| GL20619 [Drosophila persimilis]
gi|194105419|gb|EDW27462.1| GL20619 [Drosophila persimilis]
Length = 231
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 26 KRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKI 85
K KI+ IP Q L +G +L DG + DY I KE T L +
Sbjct: 104 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGM 154
Query: 86 HIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYG 144
I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 155 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYN 213
Query: 145 IREFSEIIVFLK 156
I++ S + + L+
Sbjct: 214 IQKESTLHLVLR 225
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 25/237 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRT--DTVRSLKEKIHIIDGTPIKRML 125
L + I +K + + R S K KI +G P +
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLDWQDHHPRGRALGHHRESFKAKIQDKEGIPPDQQR 119
Query: 126 LFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGAS 185
L F+G +L+D R LS+Y I++ S + + L RL +Q L G +
Sbjct: 120 LIFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKT 165
Query: 186 IPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
I LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 222
>gi|380016682|ref|XP_003692305.1| PREDICTED: uncharacterized protein LOC100871808 [Apis florea]
Length = 377
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDD 135
F+G +L+D
Sbjct: 120 IFAGKQLED 128
>gi|6650740|gb|AAF21992.1| polyubiquitin [Lilium longiflorum]
Length = 153
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDREGIPPDQQRLIFAGKQLEDGRTLADYNIHKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KIH +G P L+
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPTTRLI 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F E + R L++Y I++ S + + L+
Sbjct: 120 FAGTAE---DGRTLADYNIQKESTLHLVLR 146
>gi|195389823|ref|XP_002053573.1| GJ23969 [Drosophila virilis]
gi|194151659|gb|EDW67093.1| GJ23969 [Drosophila virilis]
Length = 125
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I I V G + LEV +LE+K +IE IPAT+Q L + G L + + YP
Sbjct: 1 MKITIKVLKGKDCTLEVSPTSTILEVKEQIEAALQIPATNQKLLLLGRPLNNDHTIASYP 60
Query: 60 IVKEGTKIDLTI 71
+KEGTKI+L +
Sbjct: 61 NIKEGTKINLVV 72
>gi|302393788|sp|P23398.2|UBIQP_STRPU RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
Flags: Precursor
gi|161616|gb|AAA30082.1| ubiquitin, partial [Strongylocentrotus purpuratus]
Length = 133
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 6 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGG 56
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +D++ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 57 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 115
Query: 144 GIREFSEIIVFLK 156
I++ S + + L+
Sbjct: 116 NIQKESTLHLVLR 128
>gi|340368423|ref|XP_003382751.1| PREDICTED: polyubiquitin-A-like [Amphimedon queenslandica]
Length = 776
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 3 IIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVD-GLDMEDYPIV 61
++ +G VL++ + + E+K +IE+ I Q LA +G L + L ++ Y V
Sbjct: 8 LVKTISGRCLVLDLSPRTTIRELKERIEEKEQISPEQQKLAFAGQVLENPSLSLQHYK-V 66
Query: 62 KEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTP 120
G I L I S+ + + + I +K R ++ +D T TVR KE+I +G P
Sbjct: 67 TNGATIHLVIT----STGLKGEIMTIYVKTLTGRVVSVQIDPTSTVRDAKERIRQKEGVP 122
Query: 121 IKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
+++ L FSG L+++ R++ Y I++ S + + +K
Sbjct: 123 VEQQQLIFSGRTLEND-RSIDSYNIQKDSTVHLVIK 157
>gi|33327286|gb|AAQ08999.1| polyubiquitin 2 [Phaseolus vulgaris]
Length = 134
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 7 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGG 57
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y
Sbjct: 58 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADY 116
Query: 144 GIREFSEIIVFLK 156
I++ S + + L+
Sbjct: 117 NIQKESTLHLVLR 129
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 16/150 (10%)
Query: 103 TDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLR 162
+DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S + + L
Sbjct: 1 SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHLVL------- 52
Query: 163 DNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRI 222
RL +Q L G +I LE++ S T++ ++ + + +P + I +
Sbjct: 53 ------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ 106
Query: 223 MRDNCSLRWHGVEYGDILYVFKGTVSRGGY 252
+ D +L + ++ L++ RGG+
Sbjct: 107 LEDGRTLADYNIQKESTLHLV--LRLRGGF 134
>gi|297735960|emb|CBI23934.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 49 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGG 99
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y
Sbjct: 100 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADY 158
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLE 189
I++ S + + L RL +Q L G +I LE
Sbjct: 159 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLE 191
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 69/144 (47%), Gaps = 14/144 (9%)
Query: 99 DVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTM 158
D +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S + + L
Sbjct: 39 DQQSSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHLVL--- 94
Query: 159 NRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIH 218
RL +Q L G +I LE++ S T++ ++ + + +P + I
Sbjct: 95 ----------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 144
Query: 219 KQRIMRDNCSLRWHGVEYGDILYV 242
+ + D +L + ++ L++
Sbjct: 145 AGKQLEDGRTLADYNIQKESTLHL 168
>gi|60598636|gb|AAX25867.1| unknown [Schistosoma japonicum]
Length = 183
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G+ LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 10 GNTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L +HI +K + K ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMHIFVKTSTGKTITLEVEPSDTIENVKAKIQDKEGIPPVQHRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
+G + +D R S+Y I++ S + + L+
Sbjct: 121 SAGKQSED-GRTSSDYTIQKESTLHLVLR 148
>gi|55296615|dbj|BAD69317.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55297268|dbj|BAD69053.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 304
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 22 VLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSF-- 79
V+EIK+K+E + IP T+Q L EL D D+E YPI +G+ + L ++ + + F
Sbjct: 28 VVEIKQKVESCYGIPVTAQCLLYWNRELADDHDIEYYPIF-DGSHVLLLLHWQVAARFCW 86
Query: 80 -----------NQHDKIHIIIKFP----SRKFNIDVDRTDTVRSLKEKIH 114
HD +H+ P RK + R ++V +LK +IH
Sbjct: 87 IHGLAKWSGGDTTHDMVHVTAYLPPASWGRKVTVFARREESVAALKRRIH 136
>gi|242205760|ref|XP_002468737.1| predicted protein [Postia placenta Mad-698-R]
gi|220732122|gb|EED85960.1| predicted protein [Postia placenta Mad-698-R]
Length = 289
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 10 HEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-KID 68
+ + + E VL +K++IE+ IPA Q L SG EL D + DY + + T +
Sbjct: 123 QSIAVTLSMDEKVLVLKQQIEEKLGIPADDQRLLFSGQELEDQRSLADYELQTDNTVHLS 182
Query: 69 LTINPFLQSSFN-----------QHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHII 116
P Q S ++++ I +K + I V DTV+SL EK+ +
Sbjct: 183 TRSTPARQGSARTTLQRLRRPAPSNEEVQIFVKNLNGKTMAIMVSPADTVKSLLEKVEVK 242
Query: 117 DGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
G P + L + G +L + L++Y I++ S + + L+
Sbjct: 243 TGIPPSQQRLLYGGKQLVPDM-ILADYNIQKESTLHLVLR 281
>gi|428168160|gb|EKX37108.1| ubiquitin [Guillardia theta CCMP2712]
Length = 199
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 2 VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGG 52
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ +K KI +G P + L F+G +L+D R L++Y
Sbjct: 53 MQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLED-GRTLADY 111
Query: 144 GIREFSEIIVFLK 156
I++ S + + L+
Sbjct: 112 NIQKESTLHLVLR 124
>gi|5523985|gb|AAD44045.1|AF104028_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 357
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 28 KIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHI 87
KI+ IP Q L +G +L DG + DY I KE T L + I
Sbjct: 177 KIQDNEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQI 227
Query: 88 IIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIR 146
+K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS Y I+
Sbjct: 228 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSGYNIQ 286
Query: 147 EFSEIIVFLKTMNRLRDNPP 166
+ S + + L RLR P
Sbjct: 287 KESTLHLVL----RLRGGGP 302
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + Y I KE T +
Sbjct: 233 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSGYNIQKEST-L 291
Query: 68 DLTI-----NPFLQSSFNQHDKIHIII 89
L + P + H+K H+ I
Sbjct: 292 HLVLRLRGGGPAVCKKITNHEKCHVSI 318
>gi|83944648|gb|ABC48928.1| ubiquitin [Eisenia fetida]
Length = 121
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 1 LKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGG 51
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 52 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 110
Query: 144 GIREFSEI 151
I++ S +
Sbjct: 111 NIQKESTL 118
>gi|361584499|gb|AEW12072.1| polyubiquitin, partial [Drosophila melanogaster]
Length = 231
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 24/235 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI+ P Q L G L +G + DY I KE T
Sbjct: 10 GKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKEST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
+ + I +K + ++V+ +DT+ ++K KI + P + L
Sbjct: 67 ------IYLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
F G L++ R LS+Y I++ S I + L RL +Q L G +I
Sbjct: 121 FGGKHLEN-GRTLSDYNIQKESTIYLVL-------------RLRGGMQIFVKTLTGKTIT 166
Query: 188 LEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S ++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 167 LEVEPSDSLENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>gi|290983078|ref|XP_002674256.1| polyubiquitin [Naegleria gruberi]
gi|284087845|gb|EFC41512.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +KRK++ I Q L +G +L DG + DY I K+ T
Sbjct: 10 GRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYNIQKDST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K + I+++ DTV ++K+KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQLFVKTLTGKTITIEMESIDTVENMKQKIFDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
++G +L+D R +S+Y +++ S + + L+
Sbjct: 121 YAGKQLED-GRTISDYNLQKDSTVHLVLR 148
>gi|443697127|gb|ELT97674.1| hypothetical protein CAPTEDRAFT_147724 [Capitella teleta]
Length = 180
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 7 ANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTK 66
G ++V E + +K KI P Q + +G L + L ++D+ I +E
Sbjct: 17 CTGKTITIDVEGSETIESVKEKINAKDGTPVERQRVIYAGKLLRNDLTVDDFDIKRE-CN 75
Query: 67 IDLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRML 125
I + I F QS + +K + K IDVDR++T+ S+KEKI+ DGTP++R
Sbjct: 76 IQMLI--FSQS-------FQVFVKTCTGKTITIDVDRSETIESVKEKINAKDGTPVQRQK 126
Query: 126 LFFSG 130
L ++G
Sbjct: 127 LRYAG 131
>gi|5523977|gb|AAD44041.1|AF104024_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 365
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 191 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQIFVKTLT 241
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S +
Sbjct: 242 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLH 300
Query: 153 VFLKTMNRLRDNPP 166
+ L RLR P
Sbjct: 301 LVL----RLRGGGP 310
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T +
Sbjct: 241 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-L 299
Query: 68 DLTI-----NPFLQSSFNQHDKIHIII 89
L + P + H+K H+ I
Sbjct: 300 HLVLRLRGGGPAVCKKITNHEKCHVSI 326
>gi|157503117|gb|ABV58641.1| ubiquitin [Catharanthus roseus]
Length = 137
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 3 VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGG 53
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y
Sbjct: 54 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADY 112
Query: 144 GIREFSEIIVFLK 156
I + S + + L+
Sbjct: 113 NIXKESTLHLVLR 125
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 108 SLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPI 167
++K KI +G P + L F+G +L+D R L++Y I++ S + + L
Sbjct: 2 NVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHLVL------------ 48
Query: 168 RRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNC 227
RL +Q L G +I LE++ S T++ ++ + + +P + I + + D
Sbjct: 49 -RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 107
Query: 228 SLRWHGVEYGDILYV 242
+L + + L++
Sbjct: 108 TLADYNIXKESTLHL 122
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT 65
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 62 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIXKEST 119
>gi|255965390|gb|ACU45000.1| unknown [Pfiesteria piscicida]
Length = 133
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ IP Q L +G +L DG + DY I KE T L
Sbjct: 6 VKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGG 56
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ +K KI +G P + L F+G +L+D R L++Y
Sbjct: 57 MQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLED-GRTLADY 115
Query: 144 GIREFSEIIVFLK 156
I++ S + + L+
Sbjct: 116 NIQKESTLHLVLR 128
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 104 DTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRD 163
DT+ +K KI +G P + L F+G +L+D R L++Y I++ S + + L
Sbjct: 1 DTIDMVKSKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHLVL-------- 51
Query: 164 NPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIM 223
RL +Q L G +I LE++ S T++ ++ + + +P + I + +
Sbjct: 52 -----RLRGGMQIFVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQL 106
Query: 224 RDNCSLRWHGVEYGDILYV 242
D +L + ++ L++
Sbjct: 107 EDGRTLADYNIQKESTLHL 125
>gi|297606344|ref|NP_001058338.2| Os06g0673500 [Oryza sativa Japonica Group]
gi|52077254|dbj|BAD46297.1| pentameric polyubiquitin-like [Oryza sativa Japonica Group]
gi|52077458|dbj|BAD46688.1| pentameric polyubiquitin-like [Oryza sativa Japonica Group]
gi|255677314|dbj|BAF20252.2| Os06g0673500 [Oryza sativa Japonica Group]
Length = 187
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 22/194 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + + V+ +D + ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS--EIIVFLKTMNRLR--DNPPIRRLSFKVQTSSSLLN 182
F+ +L+D R L++Y I++ S +++ L+ R R P R L ++ + +
Sbjct: 120 IFADKQLEDG-RTLADYNIQKESTLHLVLRLRVAGRFRCFATPGGRWLC-----ANEVCD 173
Query: 183 GAS--IPLEMQDSS 194
G S P Q SS
Sbjct: 174 GVSFKFPFGFQSSS 187
>gi|123390686|ref|XP_001299928.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121880877|gb|EAX86998.1| polyubiquitin, putative [Trichomonas vaginalis G3]
Length = 186
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++K KI+ IP Q L +G +L DG ++DY I K+ T
Sbjct: 42 TGKHITLEVEPTDRIEDVKTKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDST-- 99
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ TD + +K KI +G P + L
Sbjct: 100 -------LHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRL 152
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D L +Y I++ S + + L+
Sbjct: 153 IFAGKQLED-GNTLQDYSIQKDSTLHLVLR 181
>gi|115438809|ref|NP_001043684.1| Os01g0641200 [Oryza sativa Japonica Group]
gi|302393767|sp|P0C032.2|RUB3_ORYSJ RecName: Full=Ubiquitin-like protein-NEDD8-like protein RUB3;
Contains: RecName: Full=Ubiquitin-like protein;
Contains: RecName: Full=NEDD8-like protein RUB3;
AltName: Full=OsRUB3; AltName: Full=Ubiquitin-related
protein 3; Flags: Precursor
gi|20161535|dbj|BAB90457.1| putative polyubiquitin 2 [Oryza sativa Japonica Group]
gi|20805124|dbj|BAB92795.1| putative polyubiquitin 2 [Oryza sativa Japonica Group]
gi|113533215|dbj|BAF05598.1| Os01g0641200 [Oryza sativa Japonica Group]
gi|125527016|gb|EAY75130.1| hypothetical protein OsI_03024 [Oryza sativa Indica Group]
gi|125571348|gb|EAZ12863.1| hypothetical protein OsJ_02783 [Oryza sativa Japonica Group]
Length = 154
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K K++ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + L+ N + ++ +ID++ TDTV +KE++ +G P + L
Sbjct: 67 -LHLVLRLRGGLNVK-----VRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFS 149
+ G +L D+ + +Y I S
Sbjct: 121 YGGKQLADD-KTAHDYKIEAGS 141
>gi|290974830|ref|XP_002670147.1| ubiquitin [Naegleria gruberi]
gi|284083703|gb|EFC37403.1| ubiquitin [Naegleria gruberi]
Length = 152
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +KRK++ I Q L +G +L DG + DY I K+ T
Sbjct: 10 GRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYNIQKDST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K + I+++ DTV ++K+KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
++G +L+D R +++Y +++ S + + L+
Sbjct: 121 YAGKQLED-GRTINDYNLQKDSTVHLVLR 148
>gi|123390682|ref|XP_001299927.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121880876|gb|EAX86997.1| polyubiquitin [Trichomonas vaginalis G3]
Length = 153
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++K KI+ IP Q L +G +L DG ++DY I K+ T
Sbjct: 9 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ TD + +K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D L +Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GNTLQDYSIQKDSTLHLVLR 148
>gi|342884385|gb|EGU84600.1| hypothetical protein FOXB_04788 [Fusarium oxysporum Fo5176]
Length = 890
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 42 LAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDV 100
L +G +L DG + DY I KE T L + I +K + ++V
Sbjct: 72 LIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEV 122
Query: 101 DRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNR 160
+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S + + L R
Sbjct: 123 ESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVL----R 177
Query: 161 LRDNPPIRRLSFKVQTSSSL 180
LR P+RR Q L
Sbjct: 178 LRGGQPLRRRHCHTQAYDDL 197
>gi|123471218|ref|XP_001318810.1| polyubiquitin [Trichomonas vaginalis G3]
gi|123479158|ref|XP_001322738.1| polyubiquitin [Trichomonas vaginalis G3]
gi|123501326|ref|XP_001328048.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121901578|gb|EAY06587.1| polyubiquitin, putative [Trichomonas vaginalis G3]
gi|121905590|gb|EAY10515.1| polyubiquitin, putative [Trichomonas vaginalis G3]
gi|121910986|gb|EAY15825.1| polyubiquitin, putative [Trichomonas vaginalis G3]
Length = 153
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++K KI+ IP Q L +G +L DG ++DY I K+ T
Sbjct: 9 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ TD + +K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D L +Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GNTLQDYSIQKDSTLHLVLR 148
>gi|346466265|gb|AEO32977.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 3 IIIVANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVK 62
I+ G LEV + + +K KI+ IP Q L +G +L DG + DY I K
Sbjct: 19 IVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 78
Query: 63 EGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPI 121
E T L I +K ++ ID++ TDT+ +KE++ +G P
Sbjct: 79 EST---------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPP 129
Query: 122 KRMLLFFSGIELDDEFRNLSEYGIREFS 149
+ L ++G +L D+ + EY I S
Sbjct: 130 VQQRLIYAGKQLADD-KTAKEYNIEGGS 156
>gi|290971589|ref|XP_002668572.1| polyubiquitin [Naegleria gruberi]
gi|290973569|ref|XP_002669520.1| polyubiquitin [Naegleria gruberi]
gi|290982657|ref|XP_002674046.1| polyubiquitin [Naegleria gruberi]
gi|290987245|ref|XP_002676333.1| polyubiquitin [Naegleria gruberi]
gi|290987329|ref|XP_002676375.1| polyubiquitin [Naegleria gruberi]
gi|290997377|ref|XP_002681258.1| polyubiquitin [Naegleria gruberi]
gi|284082037|gb|EFC35828.1| polyubiquitin [Naegleria gruberi]
gi|284083069|gb|EFC36776.1| polyubiquitin [Naegleria gruberi]
gi|284087634|gb|EFC41302.1| polyubiquitin [Naegleria gruberi]
gi|284089935|gb|EFC43589.1| polyubiquitin [Naegleria gruberi]
gi|284089977|gb|EFC43631.1| polyubiquitin [Naegleria gruberi]
gi|284094881|gb|EFC48514.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +KRK++ I Q L +G +L DG + DY I K+ T
Sbjct: 10 GRTITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYNIQKDST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K + I+++ DTV ++K+KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
++G +L+D R + +Y +++ S + + L+
Sbjct: 121 YAGKQLED-GRTIGDYNLQKDSTVHLVLR 148
>gi|17016983|gb|AAL33551.1|AF436850_1 polyubiquitin [Cucumis melo]
Length = 143
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 24/162 (14%)
Query: 40 QTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNI 98
Q L +G +L DG + DY I KE T L + I +K + +
Sbjct: 4 QRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGGMQIFVKTLTGKTITL 54
Query: 99 DVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTM 158
+V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S + + L
Sbjct: 55 EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHLVL--- 110
Query: 159 NRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELR 200
RL +Q L G +I LE++ S T++ ++
Sbjct: 111 ----------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 142
>gi|218198733|gb|EEC81160.1| hypothetical protein OsI_24083 [Oryza sativa Indica Group]
gi|222636075|gb|EEE66207.1| hypothetical protein OsJ_22339 [Oryza sativa Japonica Group]
Length = 240
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 62 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 119
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + + V+ +D + ++K KI +G P + L
Sbjct: 120 -------LHLVLRLRGGMQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRL 172
Query: 127 FFSGIELDDEFRNLSEYGIREFS--EIIVFLKTMNRLR 162
F+ +L+D R L++Y I++ S +++ L+ R R
Sbjct: 173 IFADKQLEDG-RTLADYNIQKESTLHLVLRLRVAGRFR 209
>gi|340382024|ref|XP_003389521.1| PREDICTED: polyubiquitin-like, partial [Amphimedon queenslandica]
Length = 921
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 23/228 (10%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI++ IP Q L G +L DG + DY I KE T +
Sbjct: 101 GKTITLEVERTDSIENVKIKIQEKEGIPPNQQRLVFDGRQLEDGPTLSDYRIQKESTLLL 160
Query: 69 LTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFF 128
L +Q +I + ++ F ++V+ +DT++++K KI G P L
Sbjct: 161 LLC---VQGGM----QIFVKQTLTNKIFTLEVEPSDTIKTVKAKIQKELGDPPDYQELKL 213
Query: 129 SGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPL 188
+L+D LS+Y +++ S + + P+ +S K+ + +I L
Sbjct: 214 DDKQLEDG-HTLSDYKVQKES-----------MLELSPLLEVSMKIFVKA--FTFKTITL 259
Query: 189 EMQDSSTVNELRHLLLSSK-ILPREDYIFIHKQRIMRDNCSLRWHGVE 235
E+ S T+ ++ +L K I P + + + +R + D C L + ++
Sbjct: 260 EVNRSDTIENVKAKILHEKGIQPDQQKLIFNGKR-LEDGCKLSNYFIQ 306
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 27/240 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDY-PIVKEGTK 66
+G + L V + + +IK KIE+I IP Q + + L D DY V K
Sbjct: 556 SGEKMELNVNFSDTISDIKAKIEEIQGIPCNRQKIMFAKKRLED-----DYVEKVLSPNK 610
Query: 67 IDLTINPFLQSSFNQH-----DKIHIIIKFPS-RKFNIDVDRTDTVRSLKEKIHIIDGTP 120
I I+ + H + I IK PS R + +VD +DT++++K KI +
Sbjct: 611 IKTLIDHNITDGSTMHLIFLRGGMTIFIKLPSGRTISFEVDPSDTIKTIKYKIQDKEKLS 670
Query: 121 IKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSL 180
+ L F+ L+D + LS+Y I++ TM+ L + P+ Q
Sbjct: 671 PNQQRLIFAFKRLEDHY-TLSDYNIQKED-------TMHLLDSSLPM-------QIFVKA 715
Query: 181 LNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDIL 240
+ G + L++ T+ +++++L K +P + + + D +L ++ ++ + L
Sbjct: 716 IIGETFALQVDSCCTIETVKYMILYEKGIPPYLQKLLFASKRLEDCHTLSYYNIKNQNTL 775
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 27/198 (13%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G V+EV + + +K+ I I +QTL +G +L D + +Y D
Sbjct: 481 GKMIVIEVLPTDTISNLKKMIRDKEKISPDNQTLFYAGRQLDDASTLANY---------D 531
Query: 69 LTINPFLQ--SSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
+ + LQ +SFN K+ + + K ++V+ +DT+ +K KI I G P R +
Sbjct: 532 IPMESILQLVTSFNPTMKVSVKL-LSGEKMELNVNFSDTISDIKAKIEEIQGIPCNRQKI 590
Query: 127 FFSGIELDDEF----------RNLSEYGIREFSEI-IVFLK-TMNRLRDNPPIRRLSFKV 174
F+ L+D++ + L ++ I + S + ++FL+ M P R +SF+V
Sbjct: 591 MFAKKRLEDDYVEKVLSPNKIKTLIDHNITDGSTMHLIFLRGGMTIFIKLPSGRTISFEV 650
Query: 175 QTSSSLLNGASIPLEMQD 192
S ++ +I ++QD
Sbjct: 651 DPSDTI---KTIKYKIQD 665
>gi|149063233|gb|EDM13556.1| rCG21222, isoform CRA_b [Rattus norvegicus]
Length = 179
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 12 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQIFVKTLT 62
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S +
Sbjct: 63 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLH 121
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRH 201
+ L RL +Q L G +I L+++ S +++
Sbjct: 122 LVL-------------RLRGGMQIFVKTLTGKTITLDVEPSVNTKKVKQ 157
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT 65
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 62 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 119
>gi|195055426|ref|XP_001994620.1| GH17339 [Drosophila grimshawi]
gi|193892383|gb|EDV91249.1| GH17339 [Drosophila grimshawi]
Length = 125
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I I V G + LEV +LE+K KI+ IPA++Q L + G L + + YP
Sbjct: 1 MQITIKVLKGTDCTLEVSSTSTILEVKEKIDAALQIPASNQKLLLLGRPLNNDQTIASYP 60
Query: 60 IVKEGTKIDLTI 71
+KEGTKI+L +
Sbjct: 61 NIKEGTKINLVV 72
>gi|242045114|ref|XP_002460428.1| hypothetical protein SORBIDRAFT_02g027940 [Sorghum bicolor]
gi|241923805|gb|EER96949.1| hypothetical protein SORBIDRAFT_02g027940 [Sorghum bicolor]
Length = 212
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 96 FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRN----LSEYGIREFSEI 151
F ++V DTV+ +KEK+ G P L +G LDD+ + +G+ E S I
Sbjct: 35 FKMEVGYFDTVQDVKEKLQSRRGWPAAATSLIHNGAVLDDDVDGGGSGIERHGVVEGSVI 94
Query: 152 IVFL------------KTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNEL 199
V L +T R R L +V S G + + + + V+ L
Sbjct: 95 HVALLDGAQHQQPQNKRTEKRKRRGEAAP-LPLRVTVVSRCGEG-RMEVAVGARAAVSVL 152
Query: 200 RHLLLSSK------ILPRED-YIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSR 249
R L ++ LPR+ Y FIH Q +M ++ S WHGV GD + VF G+V+R
Sbjct: 153 RAELERARGVGAPFPLPRDGAYFFIHGQSVMDESRSFEWHGVATGDEVVVFDGSVTR 209
>gi|296085900|emb|CBI31224.3| unnamed protein product [Vitis vinifera]
Length = 210
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 96/246 (39%), Gaps = 53/246 (21%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
+G F +EVG + VLEIK KI++ NIP +QTL +G L D ++
Sbjct: 9 SGEGFCIEVGFFDTVLEIKEKIQKYQNIPVAAQTLIFNGEVLQDESNVHSS--------- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
DL N ++Q +I K + + + ++ ++ P + F
Sbjct: 60 DLVHNSYIQ-----------LISSCPEKPATKAESSPPLSPAASRVQLLINIPTSKSQQF 108
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIP 187
+ + + +RD ++L KV G
Sbjct: 109 ------------------------PLCMHSRGTIRDC--FKKL--KVMVVLPRCGGKKTA 140
Query: 188 LEMQDSSTVNELRHLLLSSK-----ILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+E+ S V LR L + LP++ Y FI+K+ +M ++ S RWH V GD + +
Sbjct: 141 VEVNGSDKVRVLRMELDKLQKCLQFYLPKDGYYFIYKEHVMDEDRSFRWHHVGQGDTIDI 200
Query: 243 FKGTVS 248
++S
Sbjct: 201 SPTSIS 206
>gi|159472951|ref|XP_001694608.1| bi-ubiquitin [Chlamydomonas reinhardtii]
gi|158276832|gb|EDP02603.1| bi-ubiquitin [Chlamydomonas reinhardtii]
gi|300720946|gb|ADK33602.1| bi-ubiquitin [Chlamydomonas reinhardtii]
Length = 153
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K ++ ID++ +DT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGMMIKVKTLTGKEIEIDIEPSDTIERIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGI 145
F+G +++D+ + +Y I
Sbjct: 120 IFAGKQMNDD-KQAKDYNI 137
>gi|356525758|ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
gi|356556999|ref|XP_003546806.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
gi|255627501|gb|ACU14095.1| unknown [Glycine max]
Length = 154
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + EY I S
Sbjct: 120 IYAGKQLADD-KTAKEYNIEGGS 141
>gi|357494497|ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula]
gi|355518872|gb|AET00496.1| Bi-ubiquitin [Medicago truncatula]
gi|388497058|gb|AFK36595.1| unknown [Medicago truncatula]
Length = 153
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + EY I S
Sbjct: 120 IYAGKQLADD-KTAKEYNIEGGS 141
>gi|154416813|ref|XP_001581428.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121915655|gb|EAY20442.1| polyubiquitin, putative [Trichomonas vaginalis G3]
Length = 147
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++K KI+ IP Q L +G +L DG ++DY I K+ T
Sbjct: 9 TGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRLIFAGKQLEDGNTLQDYSIQKDST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ TD + +K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
F+G +L+D L +Y I++ S
Sbjct: 120 IFAGKQLED-GNTLQDYSIQKDS 141
>gi|321257695|ref|XP_003193677.1| ribosomal chaperone [Cryptococcus gattii WM276]
gi|317460147|gb|ADV21890.1| Ribosomal chaperone, putative [Cryptococcus gattii WM276]
Length = 159
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K P + DV T TV S+KE I +G P L F+G+++DDE R L+EY
Sbjct: 1 MQIFVKTLPGKTLARDVLPTSTVSSVKEMIASAEGIPASEQRLIFAGVQMDDE-RALAEY 59
Query: 144 GIREFSEI 151
GI++ S I
Sbjct: 60 GIQKESTI 67
>gi|58266072|ref|XP_570192.1| ribosomal chaperone [Cryptococcus neoformans var. neoformans JEC21]
gi|134110916|ref|XP_775922.1| ubiquitin-40S ribosomal protein S31 fusion protein [Cryptococcus
neoformans var. neoformans B-3501A]
gi|50258588|gb|EAL21275.1| hypothetical protein CNBD3290 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226425|gb|AAW42885.1| ribosomal chaperone, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|405120192|gb|AFR94963.1| ribosomal chaperone [Cryptococcus neoformans var. grubii H99]
Length = 159
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K P + DV T TV S+KE I +G P L F+G+++DDE R L+EY
Sbjct: 1 MQIFVKTLPGKTLARDVLPTSTVSSVKEMIASAEGIPASEQRLIFAGVQMDDE-RALAEY 59
Query: 144 GIREFSEI 151
GI++ S I
Sbjct: 60 GIQKESTI 67
>gi|392569336|gb|EIW62509.1| ubiquitin [Trametes versicolor FP-101664 SS1]
Length = 397
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 30/238 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
+G LEV + + IK KI+ P Q + + +L D + DY
Sbjct: 86 SGKTITLEVKPLDTIRNIKAKIQAKEGNPPDQQRIKFAEEQLEDDRTLSDY--------- 136
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
N S+ + I +K ++V +DT++ +KEK +G + L
Sbjct: 137 ----NIQWNSTLQLVGRFQIFVKTVAGETTPLEVVSSDTIKDVKEKYRDKEGAVPAQQRL 192
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G EL+D+ LS+YGI++ S + + L+ P ++ K T G +I
Sbjct: 193 IFAGKELEDDCI-LSDYGIQKDSTVHLVLRL--------PGMQIFVKSYT------GKTI 237
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFK 244
+E + S T+ +R + +K +P DYI + + D+ L + +++ D L++ +
Sbjct: 238 TIEAKSSDTIGCVRERIRDTKEIP-SDYILKFADKELEDDRMLSDYNIQWDDTLHLTR 294
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 85 IHIIIKFPS--RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSE 142
+ I +K P+ + ++VD +DT+ ++K IH +G + L F+G +L D R +S+
Sbjct: 1 MQISVKNPTTGKTITLEVDSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQL-DSHRTVSD 59
Query: 143 YGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHL 202
Y +R+ S + + + ++ + Q L+G +I LE++ T+ ++
Sbjct: 60 YNLRKGSTVFLMFRVLDGM-------------QIFVKTLSGKTITLEVKPLDTIRNIKAK 106
Query: 203 LLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDIL 240
+ + + P + + + D+ +L + +++ L
Sbjct: 107 IQAKEGNPPDQQRIKFAEEQLEDDRTLSDYNIQWNSTL 144
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 94 RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIV 153
+ ++ + DTV ++K KI DG P + L F+G +L D R LS+Y I++ S + V
Sbjct: 306 KTVTLEAESFDTVENVKAKIQDKDGNPPHKQCLIFAGKQLVDG-RTLSDYNIQKESTLHV 364
Query: 154 FLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTV 196
+ + Q S L I L+++ S TV
Sbjct: 365 VWRQFGGM-------------QPSVGTLPSEPIALDVESSDTV 394
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LE + V +K KI+ P Q L +G +LVDG + DY I KE T
Sbjct: 305 GKTVTLEAESFDTVENVKAKIQDKDGNPPHKQCLIFAGKQLVDGRTLSDYNIQKEST--- 361
Query: 69 LTINPFLQSSFNQHDKIHIII-KFPSRKFNIDVDRTDTVRSL 109
L + Q + + PS +DV+ +DTV ++
Sbjct: 362 ------LHVVWRQFGGMQPSVGTLPSEPIALDVESSDTVAAI 397
>gi|290986589|ref|XP_002676006.1| polyubiquitin [Naegleria gruberi]
gi|284089606|gb|EFC43262.1| polyubiquitin [Naegleria gruberi]
Length = 153
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K KI++ I Q L G +L DG + DY I K+ T
Sbjct: 10 GKTITLEVESNDSIENVKSKIQEKEGISPDQQRLIFGGKQLEDGRTINDYNIQKDST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K + I+++ DT+ ++K+KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQLFVKTLTGKTITIEMEANDTIENMKQKIFDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
++G +L+D R +S+Y +++ S + + L+
Sbjct: 121 YAGKQLED-GRTISDYNLQKDSTVHLVLR 148
>gi|403289148|ref|XP_003935728.1| PREDICTED: polyubiquitin-B-like [Saimiri boliviensis boliviensis]
Length = 165
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 27 RKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIH 86
++++ IP Q L +G +L DG + DY I KE T L +
Sbjct: 40 QRVQDKEGIPPDQQRLIFAGKQLEDGHTLSDYNIQKEST---------LHLVLRLRGGMQ 90
Query: 87 IIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGI 145
I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS Y I
Sbjct: 91 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSXYNI 149
Query: 146 REFSEIIVFLK 156
++ S + + L+
Sbjct: 150 QKESTLHLVLR 160
>gi|222635996|gb|EEE66128.1| hypothetical protein OsJ_22175 [Oryza sativa Japonica Group]
Length = 208
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES--- 65
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
T++ L+ K+ + ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 66 --TLHLVLRLRGGTMIKVKTLT---GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGI 145
++G +L D+ + +Y I
Sbjct: 121 YAGKQLADD-KTAKDYNI 137
>gi|50725873|dbj|BAD33402.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125564138|gb|EAZ09518.1| hypothetical protein OsI_31793 [Oryza sativa Indica Group]
Length = 192
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 96 FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSG------IELDDEFRNLSEYGIREFS 149
F ++V DTV +K+K+ G P + LF +G + YGI E S
Sbjct: 13 FKMEVGFFDTVHDIKQKLQSRRGWPAAAVSLFHNGDALADAGGGEAAGGGAERYGIVEGS 72
Query: 150 EIIVFL----------------KTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDS 193
I V L K ++ RD+ + +V S G +
Sbjct: 73 VIHVELGVGVAGRQQQLQQNEHKGRSKRRDDGG-GAAAVRVNVVSRCGRGRAEVAVGARR 131
Query: 194 STVNELRHLLLSSKILPRED-YIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGTVSR 249
+ R L + LPR+ Y FIH+Q +M ++ S WHGV GD + VF+G+V+R
Sbjct: 132 AVAALRRELEERAFPLPRDGAYFFIHRQSVMDESRSFEWHGVAAGDEVVVFEGSVTR 188
>gi|290980934|ref|XP_002673186.1| polyubiquitin [Naegleria gruberi]
gi|284086768|gb|EFC40442.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +KRK++ I Q L +G +L DG + DY I K+ T
Sbjct: 10 GITITLEVESNDSIENVKRKVQDKEGISPDQQRLIFAGKQLEDGRTINDYNIQKDST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K + I+++ DTV ++K+KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
++G +L+D R + +Y +++ S + + L+
Sbjct: 121 YAGKQLED-GRTIGDYNLQKDSTVHLVLR 148
>gi|339233028|ref|XP_003381631.1| ubiquitin family protein [Trichinella spiralis]
gi|316979531|gb|EFV62315.1| ubiquitin family protein [Trichinella spiralis]
Length = 203
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 81 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQIFVKTLT 131
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S +
Sbjct: 132 GKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLH 190
Query: 153 VFLK 156
+ L+
Sbjct: 191 LVLR 194
>gi|324515150|gb|ADY46106.1| Polyubiquitin-A [Ascaris suum]
Length = 267
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 44/239 (18%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
+G LEV + + +K KI+ IP Q L +G L D DY I K T
Sbjct: 9 SGKTITLEVEPSDTIENVKTKIQDKEGIPPIEQRLIYAGRHLQDCRTASDYNIEKAST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPS-----------RKFNIDVDRTDTVRSLKEKIHII 116
+H++++ P + ++V+ +DT+ ++K KI
Sbjct: 67 -----------------LHLLLRLPCGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDK 109
Query: 117 DGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQT 176
+G + L F+G +LDD + + +Y IR S IV L + RL +
Sbjct: 110 EGIRPDQQRLIFAGKQLDD-HQKIGDYNIRNGS--IVHL-----------VFRLRGGMLI 155
Query: 177 SSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVE 235
L G ++ LE++ S V ++ + + +P + I+ + + D+ +L + ++
Sbjct: 156 FIKTLTGVTMTLEVELSDKVQHVKAKIYDKEGIPPDQQRLIYAGKQLEDDRTLSDYNIQ 214
>gi|297846540|ref|XP_002891151.1| hypothetical protein ARALYDRAFT_473638 [Arabidopsis lyrata subsp.
lyrata]
gi|297336993|gb|EFH67410.1| hypothetical protein ARALYDRAFT_473638 [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 9/142 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKES--- 65
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
T++ L+ K+ + ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 66 --TLHLVLRLRGGTMIKVKTLT---GKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 121 YAGKQLADD-KTAKDYAIEGGS 141
>gi|18403909|ref|NP_565812.1| NEDD8-like protein RUB2 [Arabidopsis thaliana]
gi|302393809|sp|Q8RUC6.3|RUB2_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB2; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB2; AltName: Full=Ubiquitin-related protein 2;
Short=AtRUB2; Flags: Precursor
gi|18650605|gb|AAL75902.1| At1g31340/T19E23_4 [Arabidopsis thaliana]
gi|20147417|gb|AAM10418.1| At1g31340/T19E23_4 [Arabidopsis thaliana]
gi|20197530|gb|AAM15116.1| ubiquitin-like UBQ7/AtRUB2, putative [Arabidopsis thaliana]
gi|26452375|dbj|BAC43273.1| ubiquitin-like protein [Arabidopsis thaliana]
gi|330254040|gb|AEC09134.1| NEDD8-like protein RUB2 [Arabidopsis thaliana]
Length = 154
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLADD-KTAKDYAIEGGS 141
>gi|290991538|ref|XP_002678392.1| polyubiquitin [Naegleria gruberi]
gi|284092004|gb|EFC45648.1| polyubiquitin [Naegleria gruberi]
Length = 152
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 9 GHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKID 68
G LEV + + +K+K++ I Q L +G +L DG + DY I K+ T
Sbjct: 10 GRTITLEVESNDSIENVKQKVQDKEGISPDQQRLIFAGKQLEDGRTINDYNIQKDST--- 66
Query: 69 LTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLF 127
L + + +K + I+++ DTV ++K+KI +G P + L
Sbjct: 67 ------LHLVLRLRGGMQLFVKTLTGKTITIEMESNDTVENMKQKIFDKEGIPSDQQRLI 120
Query: 128 FSGIELDDEFRNLSEYGIREFSEIIVFLK 156
++G +L+D R + +Y +++ S + + L+
Sbjct: 121 YAGKQLED-GRTIGDYNLQKDSTVHLVLR 148
>gi|297823361|ref|XP_002879563.1| hypothetical protein ARALYDRAFT_482524 [Arabidopsis lyrata subsp.
lyrata]
gi|297325402|gb|EFH55822.1| hypothetical protein ARALYDRAFT_482524 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLADD-KTAKDYAIEGGS 141
>gi|326504848|dbj|BAK06715.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + V +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLADD-KTAKDYNIEGGS 141
>gi|350426996|ref|XP_003494613.1| PREDICTED: polyubiquitin-A-like, partial [Bombus impatiens]
Length = 136
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 24/157 (15%)
Query: 45 SGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRT 103
+G +L DG + DY I KE T L + I +K + ++V+ +
Sbjct: 1 AGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVEAS 51
Query: 104 DTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRD 163
DT+ ++K KI +G P + + F+G +L+D R LS+Y I++ S + + L
Sbjct: 52 DTIENVKAKIQDKEGIPPDQQRVIFAGKQLED-GRTLSDYNIQKESTLHLVL-------- 102
Query: 164 NPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELR 200
RL +Q L G +I LE++ S T+ ++
Sbjct: 103 -----RLRGGMQIFVKTLTGKTITLEVEASDTIENVK 134
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q + +G +L DG + DY I KE T
Sbjct: 40 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRVIFAGKQLEDGRTLSDYNIQKEST-- 97
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEK 112
L + I +K + ++V+ +DT+ ++K K
Sbjct: 98 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAK 136
>gi|388508634|gb|AFK42383.1| unknown [Medicago truncatula]
Length = 153
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + +
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRV 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + EY I S
Sbjct: 120 IYAGKQLADD-KTAKEYNIEGGS 141
>gi|449444274|ref|XP_004139900.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
gi|449532435|ref|XP_004173186.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Cucumis sativus]
Length = 154
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLGDD-KTAKDYNIEGGS 141
>gi|297606280|ref|NP_001058221.2| Os06g0650100 [Oryza sativa Japonica Group]
gi|255677281|dbj|BAF20135.2| Os06g0650100, partial [Oryza sativa Japonica Group]
Length = 177
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 33 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 90
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 91 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 143
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 144 IYAGKQLADD-KTAKDYNIEGGS 165
>gi|255544634|ref|XP_002513378.1| ubiquitin, putative [Ricinus communis]
gi|223547286|gb|EEF48781.1| ubiquitin, putative [Ricinus communis]
Length = 154
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLGDD-KTARDYNIEGGS 141
>gi|225465030|ref|XP_002265864.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2 [Vitis vinifera]
gi|297736166|emb|CBI24204.3| unnamed protein product [Vitis vinifera]
Length = 155
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLGDD-KTARDYNIEGGS 141
>gi|115479211|ref|NP_001063199.1| Os09g0420800 [Oryza sativa Japonica Group]
gi|242044708|ref|XP_002460225.1| hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor]
gi|357158453|ref|XP_003578133.1| PREDICTED: ubiquitin-NEDD8-like protein RUB1-like [Brachypodium
distachyon]
gi|302393765|sp|P0C030.2|RUB1_ORYSJ RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB1; AltName: Full=OsRUB1; AltName:
Full=Ubiquitin-related protein 1; Flags: Precursor
gi|50725971|dbj|BAD33498.1| polyubiquitin 2 [Oryza sativa Japonica Group]
gi|50726105|dbj|BAD33626.1| polyubiquitin 2 [Oryza sativa Japonica Group]
gi|113631432|dbj|BAF25113.1| Os09g0420800 [Oryza sativa Japonica Group]
gi|125563747|gb|EAZ09127.1| hypothetical protein OsI_31396 [Oryza sativa Indica Group]
gi|215704536|dbj|BAG94169.1| unnamed protein product [Oryza sativa Japonica Group]
gi|241923602|gb|EER96746.1| hypothetical protein SORBIDRAFT_02g024880 [Sorghum bicolor]
gi|326513616|dbj|BAJ87827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLADD-KTAKDYNIEGGS 141
>gi|443729754|gb|ELU15557.1| hypothetical protein CAPTEDRAFT_1967 [Capitella teleta]
Length = 188
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 83 DKIHIII--KFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNL 140
+ IH+I+ P FN+D ++DT+R+LKE I+ P + L F + L D +
Sbjct: 107 NTIHVIVVRTLPGFTFNVDTQQSDTIRNLKEHIYAAQKIPPEEQKLQFLKVNLKDS-HTV 165
Query: 141 SEYGIREFSEIIVFLK 156
YGI+E SEI++ LK
Sbjct: 166 GSYGIKEGSEILLILK 181
>gi|449274942|gb|EMC83969.1| 54 kDa 2'-5'-oligoadenylate synthetase-like protein 2 [Columba
livia]
Length = 513
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 22 VLEIKRKIEQIFNIPATSQTLAVSGWE-----LVDGLDMEDYPIVKEGTKIDLTINPFLQ 76
V ++K +IEQ + IP Q L + L D + Y I T I L P
Sbjct: 373 VWKLKEQIEQTWGIPRYRQRLTLQETSEKTLILQDSETLASYGIFYSTTLILLHTEPLEM 432
Query: 77 SSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDE 136
F + DK ++ V TDTV LKEKIH G P + L + EL+D+
Sbjct: 433 EVFVKDDK--------NKTTTYMVLPTDTVWQLKEKIHARQGPPANQQRLTYGSKELEDQ 484
Query: 137 FRNLSEYGIREFSEIIVFLK 156
+ L+ Y ++ S I + L+
Sbjct: 485 Y-TLAHYDVQPRSTIFMLLR 503
>gi|224083970|ref|XP_002307191.1| predicted protein [Populus trichocarpa]
gi|118481405|gb|ABK92645.1| unknown [Populus trichocarpa]
gi|118486039|gb|ABK94863.1| unknown [Populus trichocarpa]
gi|222856640|gb|EEE94187.1| predicted protein [Populus trichocarpa]
Length = 157
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLGDD-KTARDYNIEGGS 141
>gi|30692436|ref|NP_564379.2| NEDD8-like protein RUB1 [Arabidopsis thaliana]
gi|302393813|sp|Q9SHE7.3|RUB1_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB1; AltName: Full=Ubiquitin-related protein 1;
Short=AtRUB1; Flags: Precursor
gi|6692129|gb|AAF24594.1|AC007654_10 T19E23.13 [Arabidopsis thaliana]
gi|28973676|gb|AAO64156.1| putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
gi|29824269|gb|AAP04095.1| putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
gi|110737109|dbj|BAF00506.1| putative ubiquitin [Arabidopsis thaliana]
gi|312283039|dbj|BAJ34385.1| unnamed protein product [Thellungiella halophila]
gi|332193223|gb|AEE31344.1| NEDD8-like protein RUB1 [Arabidopsis thaliana]
Length = 156
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLADD-KTAKDYNIEGGS 141
>gi|449533510|ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucumis sativus]
Length = 126
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 8 GIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGGMQIFVKTLT 58
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S +
Sbjct: 59 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLH 117
Query: 153 VFLK 156
+ L+
Sbjct: 118 LVLR 121
>gi|123454695|ref|XP_001315099.1| polyubiquitin [Trichomonas vaginalis G3]
gi|121897765|gb|EAY02876.1| polyubiquitin, putative [Trichomonas vaginalis G3]
Length = 153
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + ++K KI+ +IP Q L +G +L DG ++DY I K+ T
Sbjct: 9 TGKHITLEVEPTDRIEDVKAKIQDKEDIPPDQQRLIFAGKQLEDGNTLQDYSIQKDST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ TD + +K KI + P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKHITLEVEPTDRIEDVKAKIQDKEDIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D L +Y I++ S + + L+
Sbjct: 120 IFAGKQLED-GNTLQDYSIQKDSTLHLVLR 148
>gi|242093754|ref|XP_002437367.1| hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]
gi|357123249|ref|XP_003563324.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Brachypodium
distachyon]
gi|302393766|sp|P0C031.2|RUB2_ORYSJ RecName: Full=Ubiquitin-NEDD8-like protein RUB2; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB2; AltName: Full=OsRUB2; AltName:
Full=Ubiquitin-related protein 2; Flags: Precursor
gi|51534981|dbj|BAD38105.1| polyubiquitin 2 [Oryza sativa Japonica Group]
gi|215692861|dbj|BAG88281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186299|gb|EEC68726.1| hypothetical protein OsI_37226 [Oryza sativa Indica Group]
gi|218198663|gb|EEC81090.1| hypothetical protein OsI_23921 [Oryza sativa Indica Group]
gi|241915590|gb|EER88734.1| hypothetical protein SORBIDRAFT_10g025670 [Sorghum bicolor]
Length = 153
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLADD-KTAKDYNIEGGS 141
>gi|84796035|gb|ABC66105.1| putative pentameric polyubiquitin [Zinnia violacea]
Length = 122
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 4 GIPPDQQRLIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGGMQIFVKTLT 54
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S +
Sbjct: 55 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLH 113
Query: 153 VFLK 156
+ L+
Sbjct: 114 LVLR 117
>gi|324522667|gb|ADY48104.1| Polyubiquitin-A [Ascaris suum]
Length = 194
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 17 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 74
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 75 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 127
Query: 127 FFSG 130
F+G
Sbjct: 128 IFAG 131
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 9 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDY 67
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I LE++ S T+ ++ +
Sbjct: 68 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 114
Query: 204 LSSKILP--REDYIFIHKQRIMRDNCSLR 230
+ +P ++ IF K+RI LR
Sbjct: 115 QDKEGIPPDQQRLIFAGKRRIRLKMSKLR 143
>gi|148905884|gb|ABR16104.1| unknown [Picea sitchensis]
gi|224286933|gb|ACN41169.1| unknown [Picea sitchensis]
Length = 153
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE +
Sbjct: 9 TGKTITLEVESSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLDDGRSLADYNIQKESS-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIERIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +++D+ + +Y I S
Sbjct: 120 IYAGKQMNDD-KTARDYNIEGGS 141
>gi|302393764|sp|P0C073.2|RUB1_DESAN RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
protein RUB1; AltName: Full=DaRUB1; AltName:
Full=Ubiquitin-related protein 1; Flags: Precursor
gi|20562909|gb|AAM22748.1| polyubiquitin 2 [Deschampsia antarctica]
Length = 153
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TDT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLADD-KTAKDYNIEGGS 141
>gi|773585|emb|CAA35578.1| ubiquitin [Tetrahymena pyriformis]
Length = 116
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 35 IPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPS 93
IP Q L +G +L DG + DY I KE T L + I +K
Sbjct: 1 IPPDQQRLIFAGKQLEDGRTVSDYNIQKEST---------LHLVLRLRGGMQIFVKTLTG 51
Query: 94 RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIV 153
+ +DV+ TD + ++K KI +G P + L F+G +L+D R++++Y I + S + +
Sbjct: 52 KTITLDVNSTDNIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRSIADYNISKESTLHL 110
Query: 154 FLK 156
L+
Sbjct: 111 VLR 113
>gi|168031292|ref|XP_001768155.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680593|gb|EDQ67028.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 173
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 15 EVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPF 74
EV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 16 EVESSDTIEAVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST--------- 66
Query: 75 LQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIEL 133
L + I +K + ++V+ +DT+ +K KI +GTP + L F+G +L
Sbjct: 67 LHLVLRLRGGMQIFVKSLRGKTITLEVESSDTIDDVKTKIQDKEGTPPDQQRLIFAGKQL 126
Query: 134 DD 135
+D
Sbjct: 127 ED 128
>gi|255584596|ref|XP_002533022.1| ubiquitin, putative [Ricinus communis]
gi|223527184|gb|EEF29353.1| ubiquitin, putative [Ricinus communis]
Length = 157
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI++ P Q L +G +L DG + DY + KE T +
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQEKEGTPPDEQRLIFAGKQLADGRTLADYNVQKEST-L 67
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + D + I+++ + F ++V+R+D + +K I G P ++ L
Sbjct: 68 RLVL-------LGLRDGMQIVVRTLKGKPFTLEVERSDAIEDVKAMIQEKVGIPQEQQRL 120
Query: 127 FFSGIELDDEFRNLSEYGI 145
+ G L D R L +Y +
Sbjct: 121 LYLGEMLKDA-RTLDDYQV 138
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K F + ++V+ +DT+ ++K KI +GTP L F+G +L D R L++Y
Sbjct: 1 MQIFVKTFTGKTITLEVESSDTIDNVKAKIQEKEGTPPDEQRLIFAGKQLAD-GRTLADY 59
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
+++ S + + L LRD +Q L G LE++ S + +++ ++
Sbjct: 60 NVQKESTLRLVLLG---LRDG---------MQIVVRTLKGKPFTLEVERSDAIEDVKAMI 107
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSL 229
+P+E ++ +++D +L
Sbjct: 108 QEKVGIPQEQQRLLYLGEMLKDARTL 133
>gi|157138585|ref|XP_001664265.1| ubiquitin [Aedes aegypti]
gi|108880553|gb|EAT44778.1| AAEL003888-PA [Aedes aegypti]
Length = 154
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 12/151 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + IK KIE IP Q L +G +L DG + DY + K T
Sbjct: 9 TGKTITLDVEAVDTIQNIKGKIEDKEGIPPDQQRLIFAGKQLEDGRALSDYNVQKGST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKI-HIIDGTPIKRML 125
L + I +K R ID + D+V +L+ KI ++ P ++
Sbjct: 67 -------LHLVLRLRGGMQIFVKMLTGRTMAIDTEPEDSVETLRVKISEKLEEMPPNQLR 119
Query: 126 LFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
L F+G +L+D R L EY I + S + + L+
Sbjct: 120 LIFAGKQLED-GRTLQEYSIIKGSTVHLVLR 149
>gi|145530712|ref|XP_001451128.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418772|emb|CAK83731.1| unnamed protein product [Paramecium tetraurelia]
Length = 169
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 17/150 (11%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDTIDAVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ + ++ G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDTIDATRK------GIPPDQQRL 113
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 114 IFAGKQLEDG-RTLSDYNIQKESTLHLVLR 142
>gi|226532866|ref|NP_001148606.1| LOC100282222 [Zea mays]
gi|194700092|gb|ACF84130.1| unknown [Zea mays]
gi|195619630|gb|ACG31645.1| polyubiquitin 2 [Zea mays]
gi|195620202|gb|ACG31931.1| polyubiquitin 2 [Zea mays]
gi|195620238|gb|ACG31949.1| polyubiquitin 2 [Zea mays]
gi|195620732|gb|ACG32196.1| polyubiquitin 2 [Zea mays]
gi|195620942|gb|ACG32301.1| polyubiquitin 2 [Zea mays]
gi|195628320|gb|ACG35990.1| polyubiquitin 2 [Zea mays]
gi|414885492|tpg|DAA61506.1| TPA: polyubiquitin 2 isoform 1 [Zea mays]
gi|414885493|tpg|DAA61507.1| TPA: polyubiquitin 2 isoform 2 [Zea mays]
Length = 153
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + V +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ TD++ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDSIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLADD-KTAKDYNIEGGS 141
>gi|353237461|emb|CCA69433.1| related to UBI4-Ubiquitin [Piriformospora indica DSM 11827]
Length = 195
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 35/183 (19%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEG--- 64
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE
Sbjct: 9 TGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68
Query: 65 --------------TKIDLTINPFLQSSFN----------------QHDKIHIIIK-FPS 93
T TI ++SS ++ I +K
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRMQIFVKTLTG 128
Query: 94 RKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIV 153
+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S + +
Sbjct: 129 KTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHL 187
Query: 154 FLK 156
L+
Sbjct: 188 VLR 190
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 59
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I LE++ S T++ ++ +
Sbjct: 60 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKI 106
Query: 204 LSSKILP 210
+ +P
Sbjct: 107 QDKEGIP 113
>gi|195569997|ref|XP_002102995.1| GD20202 [Drosophila simulans]
gi|194198922|gb|EDX12498.1| GD20202 [Drosophila simulans]
Length = 130
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I I V G + +EV +LE+K +IE I AT+Q L + G L + + YP
Sbjct: 1 MQITIKVLKGKDCTIEVAPTSTILEVKHQIEAELQISATNQKLLLLGRPLNNEQTIASYP 60
Query: 60 IVKEGTKIDL-TINPFLQSS----FNQH 82
+KEGTK++L I P L+ S F +H
Sbjct: 61 NIKEGTKLNLVVIKPCLRDSILRGFRKH 88
>gi|5523973|gb|AAD44039.1|AF104022_1 polyprotein [Bovine viral diarrhea virus 2]
Length = 228
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 40 QTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNI 98
Q L +G +L DG + DY I KE T L + I +K + +
Sbjct: 60 QRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQIFVKTLTGKTITL 110
Query: 99 DVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTM 158
+V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S + + L
Sbjct: 111 EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVL--- 166
Query: 159 NRLRDNPP 166
RLR P
Sbjct: 167 -RLRGGGP 173
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G LEV + + +K KI+ IP Q L +G +L DG + DY
Sbjct: 96 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 155
Query: 60 IVKEGTKIDLTI-----NPFLQSSFNQHDKIHIII 89
I KE T + L + P + H+K H+ I
Sbjct: 156 IQKEST-LHLVLRLRGGGPAVCKKITNHEKCHVSI 189
>gi|24647837|ref|NP_650680.1| CG7215, isoform A [Drosophila melanogaster]
gi|281362002|ref|NP_001163644.1| CG7215, isoform B [Drosophila melanogaster]
gi|7300339|gb|AAF55498.1| CG7215, isoform A [Drosophila melanogaster]
gi|272477036|gb|ACZ94940.1| CG7215, isoform B [Drosophila melanogaster]
Length = 130
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I I V G + +EV +LE+K +IE I AT+Q L + G L + + YP
Sbjct: 1 MQITIKVLKGKDCTIEVAPTSTILEVKHQIEAELQISATNQKLLLLGRPLNNEQTIASYP 60
Query: 60 IVKEGTKIDL-TINPFLQSS----FNQH 82
+KEGTK++L I P L+ S F +H
Sbjct: 61 NIKEGTKLNLVVIKPCLRDSILRGFRKH 88
>gi|195107359|ref|XP_001998281.1| GI23879 [Drosophila mojavensis]
gi|193914875|gb|EDW13742.1| GI23879 [Drosophila mojavensis]
Length = 125
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+III V G + LEV + E+K KI+ IPAT+Q L + G L + + YP
Sbjct: 1 MKIIIKVLKGKDCTLEVSPTSTIQELKEKIDVALQIPATNQKLLLLGRPLNNDQTIASYP 60
Query: 60 IVKEGTKIDLTI 71
+KEGTK+ L +
Sbjct: 61 NIKEGTKLILVV 72
>gi|195157836|ref|XP_002019800.1| GL12015 [Drosophila persimilis]
gi|194116391|gb|EDW38434.1| GL12015 [Drosophila persimilis]
Length = 130
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+III V G + LEV +LE+K++IE I A +Q L + G L + L + Y
Sbjct: 1 MQIIIKVLTGKDCTLEVLPTHTILEVKQQIETALKITAANQKLLLMGRPLNNDLTISSYA 60
Query: 60 IVKEGTKIDLTI 71
+KEGTKI+L +
Sbjct: 61 NIKEGTKINLVV 72
>gi|125778398|ref|XP_001359957.1| GA17200 [Drosophila pseudoobscura pseudoobscura]
gi|54639707|gb|EAL29109.1| GA17200 [Drosophila pseudoobscura pseudoobscura]
Length = 130
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+III V G + LEV +LE+K++IE I A +Q L + G L + L + Y
Sbjct: 1 MQIIIKVLTGKDCTLEVLPTNTILEVKQQIETALKITAANQKLLLMGRPLNNDLTISSYA 60
Query: 60 IVKEGTKIDLTI 71
+KEGTKI+L +
Sbjct: 61 NIKEGTKINLVV 72
>gi|403284848|ref|XP_003933764.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like isoform 4
[Saimiri boliviensis boliviensis]
Length = 121
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 34 NIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FP 92
IP Q L + +L DG ++ DY I KE T L + I +K
Sbjct: 3 GIPPDQQRLIFARKQLEDGRNLSDYNIQKEST---------LHLILRLRGGMQIFVKTLT 53
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFS 149
S+ ++V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S
Sbjct: 54 SKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKES 109
>gi|148905774|gb|ABR16051.1| unknown [Picea sitchensis]
gi|148906367|gb|ABR16338.1| unknown [Picea sitchensis]
gi|148906448|gb|ABR16377.1| unknown [Picea sitchensis]
Length = 153
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + IK KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVESSDTIDNIKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I I +K ++ ID++ DT+ +K+++ +G P + L
Sbjct: 67 -------LHLVLRLRGGISIKVKTLTGKEVEIDIEPHDTIERIKQRVEEKEGIPPIQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
+ G +++D+ + EY I S
Sbjct: 120 IYGGKQMNDD-KTAREYNIEGGS 141
>gi|89114278|gb|ABD61727.1| polyubiquitin [Lupinus albus]
Length = 132
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 24/155 (15%)
Query: 42 LAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDV 100
L +G +L DG + DY I KE T L + I +K + ++V
Sbjct: 1 LIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEV 51
Query: 101 DRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNR 160
+ +DT+ ++K KI +G P + L F+G +L+D R L++Y I++ S + + L
Sbjct: 52 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLADYNIQKESTLHLVL----- 105
Query: 161 LRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSST 195
RL +Q L G +I LE++ S T
Sbjct: 106 --------RLRGGMQIFVKTLTGKTITLEVESSDT 132
>gi|7862066|gb|AAF70460.1|AF240445_1 polyubiquitin [Populus tremula x Populus tremuloides]
Length = 154
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDAIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ DT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLGDD-KTARDYNIEGGS 141
>gi|414588568|tpg|DAA39139.1| TPA: putative ubiquitin family protein isoform 1 [Zea mays]
gi|414588569|tpg|DAA39140.1| TPA: putative ubiquitin family protein isoform 2 [Zea mays]
Length = 222
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 102/238 (42%), Gaps = 32/238 (13%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
+G L V + + +K+KI + ++ L G ++ D L + DY I
Sbjct: 9 SGKMICLRVQPDDTLHTVKKKILEKYH-------LVFEGVQMEDNLTLADYNIQH----- 56
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRKFNI--DVDRTDTVRSLKEKIHIIDGTPIKRML 125
QS+ + +K+ I +K + I DVD DT+ +K+KI +G P R
Sbjct: 57 --------QSTLDLQEKMQIYVKETLKGLTITLDVDSLDTIDIIKDKIEYNEGFPKGRQC 108
Query: 126 LFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGAS 185
L F +L+ ++ L++Y I S +++ + P S +Q + NG +
Sbjct: 109 LIFGDEQLEGKY-TLADYNICNESTLLLVIH---------PCTSTSDAMQIFVKMQNGKT 158
Query: 186 IPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVF 243
+ + S TVN + + + +P + I + R + +L +G++ + L++
Sbjct: 159 TTVRVDSSDTVNSITVKIYEMEGIPPLEQRIIFRGRRLEGRRTLADYGIQKEETLHLM 216
>gi|255966040|gb|ACU45305.1| polyubiquitin 6 [Rhodomonas sp. CCMP768]
Length = 125
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 28 KIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHI 87
KI+ IP Q +G +L DG + DY I KE T L + I
Sbjct: 1 KIQDKEGIPPDQQRWIFAGKQLEDGRTLADYNIQKEST---------LHLVLRLRGGMQI 51
Query: 88 IIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIR 146
+K + ++V+ +DT+ +K KI +G P + L F+G +L+D R L++Y I+
Sbjct: 52 FVKTLTGKTITLEVESSDTIDMVKSKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQ 110
Query: 147 EFSEIIVFLK 156
+ S + + L+
Sbjct: 111 KESTLHLVLR 120
>gi|170034811|ref|XP_001845266.1| ubiquitin [Culex quinquefasciatus]
gi|167876396|gb|EDS39779.1| ubiquitin [Culex quinquefasciatus]
Length = 323
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 16/223 (7%)
Query: 22 VLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQ 81
V ++K +++ P Q L L DG + Y VK G + L LQS +
Sbjct: 109 VGDVKIMVQEKEGFPPNQQRLIFDCQLLEDGRTLSGYN-VKHGDIMLL----LLQSGGSC 163
Query: 82 ---HDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEF 137
+ + I +K + + V R +T +K I +G P+ + L F+ +LDDE
Sbjct: 164 DVCNPNMEIFVKSLTGKTMTMPVRRFNTAEEVKIMILQKEGIPLDQQRLVFNSKQLDDE- 222
Query: 138 RNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVN 197
R L++YGI+ I + ++ P + K+ G ++ L + +TV
Sbjct: 223 RTLADYGIQNKDTIHLLIRLGGPCNVCNPYMEIYIKLSA------GKTMTLRPRRFNTVK 276
Query: 198 ELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDIL 240
++++++L + P I Q+ + + CSL ++ ++ DI+
Sbjct: 277 DVKNMILDKEGYPPNQQRLIFNQQELENGCSLSYYHIQDKDII 319
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 104/251 (41%), Gaps = 20/251 (7%)
Query: 1 MRIII----VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDME 56
M III G F L+V V ++K I+Q P Q L + DG +
Sbjct: 1 MHIIIKSLATKCGKHFTLQVEPSNTVQDVKVMIQQKAGCPTEQQCLIADSKVMEDGRTLA 60
Query: 57 DYPIVKEGTKIDLTINPFLQSSFNQHD---KIHIIIK-FPSRKFNIDVDRTDTVRSLKEK 112
DY + + TI+ Q+ D + I +K + + + ++V +K
Sbjct: 61 DYSVQDKS-----TIHVAQQAGGPCTDCNPSMEIFVKTLTGKTIALRLRSFNSVGDVKIM 115
Query: 113 IHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSF 172
+ +G P + L F +L ++ R LS Y ++ +++ L++ P +
Sbjct: 116 VQEKEGFPPNQQRLIFD-CQLLEDGRTLSGYNVKHGDIMLLLLQSGGSCDVCNPNMEIFV 174
Query: 173 KVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWH 232
K L G ++ + ++ +T E++ ++L + +P + + + + D +L +
Sbjct: 175 KS------LTGKTMTMPVRRFNTAEEVKIMILQKEGIPLDQQRLVFNSKQLDDERTLADY 228
Query: 233 GVEYGDILYVF 243
G++ D +++
Sbjct: 229 GIQNKDTIHLL 239
>gi|357120166|ref|XP_003561800.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
L40-like [Brachypodium distachyon]
Length = 260
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 56/237 (23%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + V +K KI+ IP Q L +G +L +G + DY I+ + + +
Sbjct: 9 TGKTITLEVETSDTVANVKAKIQDKEGIPPEQQRLIFTGKQLEEGDTLADYGIIHKESTL 68
Query: 68 DLT-------------------------------------------INPFLQSSFNQHDK 84
L ++P Q + ++
Sbjct: 69 HLVLRLRGGMQIFVRSICSNKTITLDVLESRDTVGSVKAKIQDVEGVSPGEQRLRFEVEE 128
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +LDD R L++Y
Sbjct: 129 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDD-GRTLADY 187
Query: 144 GIREFSEIIVFLKTMNRLRDN-----PPIRRLSFKVQTSSSLLNG--ASIPLEMQDS 193
I++ S + + L RLR P +R L+ K + + +PL+ Q+
Sbjct: 188 NIQKESTLHLVL----RLRGGSSIIEPNLRALAQKHNQRKQICRKCYSRLPLKAQNC 240
>gi|224066593|ref|XP_002302153.1| predicted protein [Populus trichocarpa]
gi|224082516|ref|XP_002306725.1| predicted protein [Populus trichocarpa]
gi|118485172|gb|ABK94447.1| unknown [Populus trichocarpa]
gi|222843879|gb|EEE81426.1| predicted protein [Populus trichocarpa]
gi|222856174|gb|EEE93721.1| predicted protein [Populus trichocarpa]
Length = 154
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L I +K ++ ID++ DT+ +KE++ +G P + L
Sbjct: 67 -------LHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKEGIPPVQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFS 149
++G +L D+ + +Y I S
Sbjct: 120 IYAGKQLGDD-KTARDYNIEGGS 141
>gi|70780322|gb|AAZ08412.1| polyubiquitin [Populus alba]
Length = 139
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 24/156 (15%)
Query: 46 GWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTD 104
G +L DG + DY I KE T L + I +K + ++V+ +D
Sbjct: 4 GKQLEDGRTLADYNIQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVESSD 54
Query: 105 TVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDN 164
T+ ++K KI +G P + L F+G +L+D R L++Y I++ S + L
Sbjct: 55 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTPHLVL--------- 104
Query: 165 PPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELR 200
RL +Q L G +I LE++ S T++ ++
Sbjct: 105 ----RLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 136
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 42 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 99
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKI 113
P L + I +K + ++V+ +DT+ ++K KI
Sbjct: 100 -----PHL--VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 139
>gi|443733407|gb|ELU17776.1| hypothetical protein CAPTEDRAFT_120274 [Capitella teleta]
Length = 79
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 87 IIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIR 146
++ P FN+D ++DT+R+LKE I+ P + L F + L D + YGI+
Sbjct: 4 VVRTLPGFTFNVDTQQSDTIRNLKEHIYAAQKIPPEEQKLQFLKVNLKDS-HTVGSYGIK 62
Query: 147 EFSEIIVFLK 156
E SEI++ LK
Sbjct: 63 EGSEILLILK 72
>gi|323455122|gb|EGB10991.1| hypothetical protein AURANDRAFT_52735 [Aureococcus anophagefferens]
Length = 204
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 19/166 (11%)
Query: 93 SRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEII 152
+ +DV+ +DT+ ++K+KI +G P + L F+G +L+D R LS+Y I++ S +
Sbjct: 10 GKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLH 68
Query: 153 VFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGAS---IP----LEMQ-----DSSTVNELR 200
+ L+ +R N + ++ S + G + IP ++ Q S+ V EL+
Sbjct: 69 LVLRLRGGVRIN--LCWMTAGNWNSEHIREGCTEGIIPGTGYIKFQVDVDLKSTNVAELK 126
Query: 201 HLLLSSKILPREDY---IFIHKQRIM-RDNCSLRWHGVEYGDILYV 242
+ +S LP Y H + IM + +L+ + V+ GD++++
Sbjct: 127 KIATASGSLPPLHYPVGFAFHGKYIMDEEGATLKKYSVKRGDVVFM 172
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 31/197 (15%)
Query: 1 MRIII-VANGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYP 59
M+I + G L+V + + +K+KI+ IP Q L +G +L DG + DY
Sbjct: 1 MQIFVKTLTGKTITLDVEPSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 60 IVKE-----------GTKIDL---TINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDT 105
I KE G +I+L T + + II KF +DVD T
Sbjct: 61 IQKESTLHLVLRLRGGVRINLCWMTAGNWNSEHIREGCTEGIIPGTGYIKFQVDVDLKST 120
Query: 106 VRSLKEKIHIIDGT--PIKRMLLF-FSGIE-LDDEFRNLSEYGIREFSEIIVFLKTMNRL 161
+ +KI G+ P+ + F F G +D+E L +Y ++ +VF+
Sbjct: 121 NVAELKKIATASGSLPPLHYPVGFAFHGKYIMDEEGATLKKYSVKRGD--VVFMD----- 173
Query: 162 RDNPPIRRLSFKVQTSS 178
+RR F++Q +
Sbjct: 174 -----VRREPFELQKTG 185
>gi|21314339|gb|AAM46896.1|AF506020_1 polyubiquitin [Tribolium castaneum]
Length = 112
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 28 KIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHI 87
KI+ IP Q L +G +L DG + DY I KE T L + I
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQI 51
Query: 88 IIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIR 146
+K + ++V+ +DT+ ++K KI +G P + F+G +L+D R LS+Y I+
Sbjct: 52 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLED-GRTLSDYNIQ 110
Query: 147 E 147
+
Sbjct: 111 K 111
>gi|3158372|gb|AAC39466.1| polyubiquitin [Arabidopsis thaliana]
Length = 137
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 24/154 (15%)
Query: 48 ELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTV 106
+L DG + DY I KE T L + I +K + ++V+ +DT+
Sbjct: 1 QLEDGRTLADYNIQKEST---------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI 51
Query: 107 RSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPP 166
++K KI +G P + L F+G +L+D R L++Y I++ S + + L
Sbjct: 52 DNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKESTLHLVL----------- 99
Query: 167 IRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELR 200
RL +Q L G +I LE++ S T++ ++
Sbjct: 100 --RLRGGMQIFVKTLTGKTISLEVESSDTIDNVK 131
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 37 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 94
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIH 114
L + I +K + +++V+ +DT+ ++K KI
Sbjct: 95 -------LHLVLRLRGGMQIFVKTLTGKTISLEVESSDTIDNVKAKIQ 135
>gi|27734335|gb|AAM51196.1| polyubiquitin [Lotharella amoeboformis]
gi|27734337|gb|AAM51197.1| polyubiquitin [Lotharella amoeboformis]
gi|27734339|gb|AAM51198.1| polyubiquitin [Lotharella amoeboformis]
Length = 98
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 91 FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSE 150
+ +DVD +DT+ ++K+KI +G P + L F+G +L+D R L++Y I++ S
Sbjct: 1 LTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKEST 59
Query: 151 IIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRH 201
+ + L RLR +Q L G +I L++ S T+N ++
Sbjct: 60 LHLVL----RLRGGA--------MQIFVKTLTGKTITLDVDSSDTINTVKQ 98
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKE 111
L + L+ Q I +K + +DVD +DT+ ++K+
Sbjct: 60 -LHLVLRLRGGAMQ-----IFVKTLTGKTITLDVDSSDTINTVKQ 98
>gi|296415756|ref|XP_002837552.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633424|emb|CAZ81743.1| unnamed protein product [Tuber melanosporum]
Length = 205
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 33/174 (18%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEK-IHIIDGTPIKRMLL 126
+H++++ + + + V++L K I + +G P + L
Sbjct: 67 -----------------LHLVLRL---RGGMQI----FVKTLTGKTITLEEGIPPDQQRL 102
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRL-SFKVQTSSS 179
F+G +L+D R LS+Y I++ S + + L RLR P +++ +FK T+ +
Sbjct: 103 IFAGKQLED-GRTLSDYNIQKESTLHLVL----RLRGGAPKKKICNFKECTTPA 151
>gi|115488154|ref|NP_001066564.1| Os12g0276300 [Oryza sativa Japonica Group]
gi|113649071|dbj|BAF29583.1| Os12g0276300, partial [Oryza sativa Japonica Group]
Length = 133
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 185 SIPLEMQDSSTVNELRHLLLSSKI---LPRED-YIFIHKQRIMRDNCSLRWHGVEYGDIL 240
+ +E+ D V +LR L + LP++ Y FI+KQ +M ++ +LRWH V+ GD +
Sbjct: 63 AAAVEVSDMLAVKDLRAELGGAAAHLPLPKDGGYFFIYKQNVMEEDRTLRWHDVKNGDTI 122
Query: 241 YVFKGTVSRG 250
+F G V+ G
Sbjct: 123 EIFNGRVTGG 132
>gi|357151560|ref|XP_003575829.1| PREDICTED: polyubiquitin 3-like [Brachypodium distachyon]
Length = 224
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 36/236 (15%)
Query: 13 VLEVGLQEPVLEIKRKI-EQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTI 71
L+V + + +K KI EQ F LA G +L D L + DY I + G+ +DL
Sbjct: 14 CLKVQSSDTLCTVKAKIQEQHF--------LAFDGKKLEDNLTLADYDI-QHGSMLDL-- 62
Query: 72 NPFLQSSFNQHDKIHIIIK--FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFS 129
+K+ I +K R ++VD DT+ ++K K+ DG + L F
Sbjct: 63 ----------QEKMQIYVKETLADRTIILEVDSLDTIGNVKAKMEDKDGFLKGQQCLIFG 112
Query: 130 GIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPI-RRLSFKVQTSSSLLNGASIPL 188
+L+DE R L+++ + + S +++ L +P + R + + G I L
Sbjct: 113 SKQLEDE-RTLADHNVLKDSTLLLVL--------HPSLPRGTTMHIYVQKVEGKGKPITL 163
Query: 189 EMQDSSTVNELRHLLLSSKILPRE-DYIFIHKQRIMRDNCSLRWHGVEYGDILYVF 243
E++ T+N ++ + +S K R + +++D +L +G+E GD L F
Sbjct: 164 EVESHDTINVVK-MKISEKDGTRPIQCRLMFDCTVLKDYRTLADYGIERGDTLDFF 218
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 13 VLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTIN 72
+LEV + + +K K+E Q L +L D + D+ ++K+ T + L ++
Sbjct: 80 ILEVDSLDTIGNVKAKMEDKDGFLKGQQCLIFGSKQLEDERTLADHNVLKDSTLL-LVLH 138
Query: 73 PFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGT-PIKRMLLFFSGI 131
P L H + ++ + ++V+ DT+ +K KI DGT PI+ L+F +
Sbjct: 139 PSLPRGTTMHIYVQ-KVEGKGKPITLEVESHDTINVVKMKISEKDGTRPIQCRLMFDCTV 197
Query: 132 ELDDEFRNLSEYGIREFSEIIVFL 155
D +R L++YGI + F+
Sbjct: 198 LKD--YRTLADYGIERGDTLDFFM 219
>gi|27734343|gb|AAM51200.1| polyubiquitin [Lotharella globosa]
gi|27734345|gb|AAM51201.1| polyubiquitin [Lotharella globosa]
gi|27734347|gb|AAM51202.1| polyubiquitin [Lotharella globosa]
Length = 98
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 91 FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSE 150
+ +DVD +DT+ ++K+KI +G P + L F+G +L+D R L++Y I++ S
Sbjct: 1 LTGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKEST 59
Query: 151 IIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRH 201
+ + L RLR +Q L G +I L++ S T+N ++
Sbjct: 60 LHLVL----RLRGGS--------MQIFVKTLTGKTITLDVDSSDTINTVKQ 98
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTITLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKE 111
L + L+ + I +K + +DVD +DT+ ++K+
Sbjct: 60 -LHLVLRLRGG-----SMQIFVKTLTGKTITLDVDSSDTINTVKQ 98
>gi|111140007|gb|ABH06365.1| ubiquitin [Sorbus aucuparia]
Length = 141
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 27 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 84
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 85 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 137
Query: 127 FFSG 130
F+G
Sbjct: 138 IFAG 141
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +L+D R L++Y
Sbjct: 19 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLADY 77
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L G +I LE++ S T++ ++ +
Sbjct: 78 NIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI 124
Query: 204 LSSKILP 210
+ +P
Sbjct: 125 QDKEGIP 131
>gi|29425820|gb|AAO73559.1| polyubiquitin [Anas platyrhynchos]
gi|29425822|gb|AAO73560.1| polyubiquitin [Anas platyrhynchos]
Length = 115
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 40 QTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDKIHIIIK-FPSRKFNI 98
Q L +G +L DG + DY I KE T L + I +K + +
Sbjct: 1 QRLIFAGKQLEDGRTLSDYNIQKEST---------LHLVLRLRGGMQIFVKTLTGKTITL 51
Query: 99 DVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
+V+ +DT+ ++K KI +G P + L F+G +L+D R LS+Y I++ S + + L+
Sbjct: 52 EVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKESTLHLVLR 108
>gi|442761305|gb|JAA72811.1| Putative ubiquitin/40s ribosomal protein s27a fusion, partial
[Ixodes ricinus]
Length = 157
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 27/168 (16%)
Query: 67 IDLTINPFLQSSFNQHDKIHIIIKF-----------PSRKFNIDVDRTDTVRSLKEKIHI 115
+D T++P ++F + +H++++ + ++V+ +DT+ ++K KI
Sbjct: 2 VDGTVDPCRTTTFLKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 61
Query: 116 IDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQ 175
+G P + L F+G +L+D R LS+Y I++ + R F V+
Sbjct: 62 KEGIPPDQQRLIFAGKQLED-GRTLSDYNIQKNPPSTWCCGSAVECR---------FFVK 111
Query: 176 TSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILP--REDYIFIHKQR 221
T L G +I LE++ S T+ ++ + + +P ++ IF K +
Sbjct: 112 T----LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKNQ 155
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I K
Sbjct: 38 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK----- 92
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
NP + +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 93 ----NPPSTWCCGSAVECRFFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 148
Query: 127 FFSG 130
F+G
Sbjct: 149 IFAG 152
>gi|27734333|gb|AAM51195.1| polyubiquitin [Lotharella amoeboformis]
Length = 98
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 91 FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSE 150
+ +DVD +DT+ ++K+KI +G P + L F+G +L+D R L++Y I++ S
Sbjct: 1 LTGKTTTLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLED-GRTLADYNIQKEST 59
Query: 151 IIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRH 201
+ + L RLR +Q L G +I L++ S T+N ++
Sbjct: 60 LHLVL----RLRGGA--------MQIFVKTLTGKTITLDVDSSDTINTVKQ 98
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 2 TGKTTTLDVDSSDTINTVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 59
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKE 111
L + L+ + I +K + +DVD +DT+ ++K+
Sbjct: 60 -LHLVLRLRGG-----AMQIFVKTLTGKTITLDVDSSDTINTVKQ 98
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.141 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,723,588,149
Number of Sequences: 23463169
Number of extensions: 145827890
Number of successful extensions: 361723
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2015
Number of HSP's successfully gapped in prelim test: 569
Number of HSP's that attempted gapping in prelim test: 351240
Number of HSP's gapped (non-prelim): 5291
length of query: 252
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 113
effective length of database: 9,097,814,876
effective search space: 1028053080988
effective search space used: 1028053080988
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)