BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045158
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42739|UBIQP_ACECL Polyubiquitin (Fragment) OS=Acetabularia cliftonii PE=3 SV=2
Length = 423
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + V +K KI+ IP Q L +G +L DGL + DY I KE T
Sbjct: 50 TGKTITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYNIQKEST-- 107
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DTV ++K KI +G P + L
Sbjct: 108 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRL 160
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 161 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 206
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S TV ++ + + +P + I + + D +L + ++ L++
Sbjct: 207 TLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 262
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + V +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 278 TGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 335
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DTV ++K KI +G P + +
Sbjct: 336 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRI 388
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 389 IFAGKQLED-GRTLADYNIQKESTLHLVLR 417
>sp|P0CG70|UBI4P_NEUCR Polyubiquitin OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=ubi-4 PE=1 SV=1
Length = 305
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K+KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKQKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>sp|Q8MKD1|UBB_HORSE Polyubiquitin-B OS=Equus caballus GN=UBB PE=2 SV=3
Length = 305
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + FI + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>sp|P0CG73|UBI1P_CANAX Polyubiquitin OS=Candida albicans GN=UBI1 PE=1 SV=1
Length = 229
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRSRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>sp|P0CG71|UBIQ1_CAEEL Polyubiquitin-A OS=Caenorhabditis elegans GN=ubq-1 PE=2 SV=1
Length = 838
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLIGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 693 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 750
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 751 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 803
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 804 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 832
>sp|P59669|UBIQP_GEOCY Polyubiquitin OS=Geodia cydonium PE=2 SV=2
Length = 457
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVVRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV--L 451
Query: 247 VSRGGY 252
RGG+
Sbjct: 452 RLRGGF 457
>sp|P0CG63|UBI4P_YEAST Polyubiquitin OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=UBI4 PE=1 SV=1
Length = 381
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>sp|P0CG74|UBI4P_CANAX Polyubiquitin OS=Candida albicans GN=UBI4 PE=1 SV=1
Length = 305
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>sp|P0CG55|UBB_SHEEP Polyubiquitin-B OS=Ovis aries GN=UBB PE=2 SV=1
Length = 305
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRMRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>sp|P0CG72|UBI4P_SCHPO Polyubiquitin OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=ubi4 PE=1 SV=1
Length = 382
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>sp|P0CG75|UBI4P_KLULA Polyubiquitin OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
/ DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ubi4
PE=1 SV=1
Length = 381
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>sp|Q58G87|UBQ3_ORYSJ Polyubiquitin 3 OS=Oryza sativa subsp. japonica GN=UBQ3 PE=2 SV=2
Length = 381
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>sp|P0CG68|UBC_PIG Polyubiquitin-C OS=Sus scrofa GN=UBC PE=2 SV=1
Length = 533
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI++ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 389 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 446
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 447 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 499
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 500 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 528
>sp|P0CH28|UBC_BOVIN Polyubiquitin-C OS=Bos taurus GN=UBC PE=1 SV=1
Length = 690
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI++ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>sp|Q63429|UBC_RAT Polyubiquitin-C OS=Rattus norvegicus GN=Ubc PE=1 SV=1
Length = 810
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 773
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDY-IFIHKQRIMRDNCSLRW 231
LE++ S +++K + +ED F+ +C+ W
Sbjct: 774 TLEVEPS----------VNTKKVKQEDTRTFLTTVSRKSPSCACSW 809
>sp|P0CG50|UBC_MOUSE Polyubiquitin-C OS=Mus musculus GN=Ubc PE=1 SV=2
Length = 734
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>sp|P0CG60|UBB_PONPY Polyubiquitin-B OS=Pongo pygmaeus GN=UBB PE=3 SV=1
Length = 229
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>sp|P0CG65|UBB_PANTR Polyubiquitin-B OS=Pan troglodytes GN=UBB PE=3 SV=1
Length = 229
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>sp|P0CG47|UBB_HUMAN Polyubiquitin-B OS=Homo sapiens GN=UBB PE=1 SV=1
Length = 229
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>sp|P0CG67|UBB_GORGO Polyubiquitin-B OS=Gorilla gorilla gorilla GN=UBB PE=3 SV=1
Length = 229
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>sp|P0CG82|UBIQP_TETPY Polyubiquitin OS=Tetrahymena pyriformis GN=TU20 PE=3 SV=1
Length = 381
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 376
>sp|P0CG53|UBB_BOVIN Polyubiquitin-B OS=Bos taurus GN=UBB PE=1 SV=1
Length = 305
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>sp|P0CG51|UBB_RAT Polyubiquitin-B OS=Rattus norvegicus GN=Ubb PE=1 SV=1
Length = 305
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>sp|P0CG49|UBB_MOUSE Polyubiquitin-B OS=Mus musculus GN=Ubb PE=1 SV=1
Length = 305
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>sp|P0CG62|UBB_CHICK Polyubiquitin-B OS=Gallus gallus GN=UBB PE=2 SV=1
Length = 305
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 300
>sp|P0CG54|UBB_CAVPO Polyubiquitin-B OS=Cavia porcellus GN=UBB PE=2 SV=1
Length = 311
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNP 165
F+G +L+D R LS+Y I++ S + + L+ + +P
Sbjct: 272 IFAGKQLED-GRTLSDYNIQKESTLHLVLRLRGGVYASP 309
>sp|P0CG61|UBC_PONPY Polyubiquitin-C OS=Pongo pygmaeus GN=UBC PE=3 SV=1
Length = 761
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 756
>sp|P0CG64|UBC_PANTR Polyubiquitin-C OS=Pan troglodytes GN=UBC PE=3 SV=1
Length = 761
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 756
>sp|P0CG48|UBC_HUMAN Polyubiquitin-C OS=Homo sapiens GN=UBC PE=1 SV=3
Length = 685
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
>sp|P0CG66|UBC_GORGO Polyubiquitin-C OS=Gorilla gorilla gorilla GN=UBC PE=3 SV=1
Length = 609
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 604
>sp|P0CH33|UBQ11_ARATH Polyubiquitin 11 OS=Arabidopsis thaliana GN=UBQ11 PE=1 SV=1
Length = 229
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>sp|P62976|UBIQP_CRIGR Polyubiquitin OS=Cricetulus griseus PE=2 SV=2
Length = 658
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 24/195 (12%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKQGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRH 201
LE++ S+T+ + +
Sbjct: 622 TLEVEPSNTIKKSKQ 636
>sp|P0CG69|UBIQP_DROME Polyubiquitin OS=Drosophila melanogaster GN=Ubi-p63E PE=3 SV=1
Length = 763
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 449
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 465 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 522
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 523 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 575
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 576 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 621
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 617 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 674
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 675 -------LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 727
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 728 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 756
>sp|Q8H159|UBQ10_ARATH Polyubiquitin 10 OS=Arabidopsis thaliana GN=UBQ10 PE=1 SV=2
Length = 457
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 451
Query: 247 VSRGGY 252
RGG+
Sbjct: 452 RLRGGF 457
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>sp|P0CG85|UBI1P_NICSY Polyubiquitin OS=Nicotiana sylvestris GN=UBI11 PE=2 SV=1
Length = 457
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 451
Query: 247 VSRGGY 252
RGG+
Sbjct: 452 RLRGGF 457
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
>sp|P0CG84|UBI4P_NICSY Polyubiquitin (Fragment) OS=Nicotiana sylvestris GN=UBI4 PE=2 SV=1
Length = 377
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 5 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 62
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 63 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 115
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 116 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 161
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 162 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 217
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 233 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 290
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 291 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 343
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 344 IFAGKQLED-GRTLADYNIQKESTLHLVLR 372
>sp|P0CH27|RL402_TRYCR Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi PE=2 SV=1
Length = 356
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 ALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>sp|P0CH05|UBI2P_PETCR Polyubiquitin OS=Petroselinum crispum GN=PCUBI4-2 PE=3 SV=1
Length = 458
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>sp|P0CH04|UBI1P_PETCR Polyubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=2 SV=1
Length = 458
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 393
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 394 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 449
>sp|P69309|UBIQP_AVEFA Polyubiquitin OS=Avena fatua PE=2 SV=2
Length = 305
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>sp|P0CH32|UBQ4_ARATH Polyubiquitin 4 OS=Arabidopsis thaliana GN=UBQ4 PE=1 SV=1
Length = 382
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>sp|Q1EC66|UBQ3_ARATH Polyubiquitin 3 OS=Arabidopsis thaliana GN=UBQ3 PE=1 SV=1
Length = 306
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>sp|P23324|UBIQP_EUPEU Polyubiquitin OS=Euplotes eurystomus PE=3 SV=2
Length = 229
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 26/246 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+++DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEQSDTIDNVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVFKGT 246
L+++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEQSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV--L 223
Query: 247 VSRGGY 252
RGG+
Sbjct: 224 RLRGGF 229
>sp|P69315|UBIQP_LINUS Polyubiquitin (Fragment) OS=Linum usitatissimum PE=3 SV=2
Length = 305
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 50 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 107
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 108 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 160
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 161 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 206
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 207 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 262
>sp|P69322|UBIQP_PEA Polyubiquitin OS=Pisum sativum GN=PU1 PE=2 SV=2
Length = 381
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 237 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 294
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 295 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 348 IFAGKQLED-GRTLADYNIQKESTLHLVLR 376
>sp|Q3E7T8|UBQ14_ARATH Polyubiquitin 14 OS=Arabidopsis thaliana GN=UBQ14 PE=1 SV=2
Length = 305
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>sp|P69325|UBIQP_SOYBN Polyubiquitin OS=Glycine max GN=SUBI-1 PE=2 SV=2
Length = 305
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLADYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 221
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 161 TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST-- 218
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 219 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R L++Y I++ S + + L+
Sbjct: 272 IFAGKQLED-GRTLADYNIQKESTLHLVLR 300
>sp|P42740|UBIQP_AGLNE Polyubiquitin OS=Aglaothamnion neglectum PE=2 SV=2
Length = 457
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 85 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 142
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 143 -------LHLVLRLRGGMQIFVKTITGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRL 195
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 196 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 241
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 242 TLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNLQKESTLHL 297
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY KE T
Sbjct: 9 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNNQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q + G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTITGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
LE++ S T+ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 313 TGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 370
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + ++V+ +DT+ ++K KI +G P + L
Sbjct: 371 -------LHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIENVKTKIQDKEGIPPDQQRL 423
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLK 156
F+G +L+D R LS+Y I++ S + + L+
Sbjct: 424 IFAGKQLED-GRTLSDYNIQKESTLHLVLR 452
>sp|P22589|UBIQP_PHYIN Polyubiquitin OS=Phytophthora infestans PE=1 SV=2
Length = 229
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 24/236 (10%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G L+V + + +K+KI+ IP Q L +G +L DG + DY I KE T
Sbjct: 9 TGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST-- 66
Query: 68 DLTINPFLQSSFNQHDKIHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I +K + +DV+ +D++ ++K+KI +G P + L
Sbjct: 67 -------LHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRL 119
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R LS+Y I++ S + + L RL +Q L G +I
Sbjct: 120 IFAGKQLED-GRTLSDYNIQKESTLHLVL-------------RLRGGMQIFVKTLTGKTI 165
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
L+++ S +++ ++ + + +P + I + + D +L + ++ L++
Sbjct: 166 TLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221
>sp|Q9FHQ6|UBQ9_ARATH Polyubiquitin 9 OS=Arabidopsis thaliana GN=UBQ9 PE=3 SV=1
Length = 322
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 37/237 (15%)
Query: 8 NGHEFVLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKI 67
G LEV + + +K KI+ +P Q L +G +L DG + DY I KE T
Sbjct: 87 TGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKEST-- 144
Query: 68 DLTINPFLQSSFNQHDKIHIIIKFPSRK-FNIDVDRTDTVRSLKEKIHIIDGTPIKRMLL 126
L + I ++ +RK ++V+ +DT ++K KI +G P + L
Sbjct: 145 -------LHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRL 197
Query: 127 FFSGIELDDEFRNLSEYGIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASI 186
F+G +L+D R L++Y I++ S + + L RL +Q + L G +I
Sbjct: 198 IFAGKQLEDG-RTLADYNIQKESTLHLVL-------------RLCGGMQIFVNTLTGKTI 243
Query: 187 PLEMQDSSTVNELRHLLLSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYVF 243
LE++ S T++ ++ +KI +E RI D L + G + D Y
Sbjct: 244 TLEVESSDTIDNVK-----AKIQDKE--------RIQPDQQRLIFAGEQLEDGYYTL 287
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 24/219 (10%)
Query: 25 IKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGTKIDLTINPFLQSSFNQHDK 84
+K KI+ I IP Q L SG L DG + DY I K + L +
Sbjct: 28 VKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQK---------DSILHLALRLRGG 78
Query: 85 IHIIIK-FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEY 143
+ I +K + ++V+ +DT+ ++K KI +G P + L F+G +LDD R L++Y
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDG-RTLADY 137
Query: 144 GIREFSEIIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLL 203
I++ S + + L RL +Q L +I LE++ S T + ++ +
Sbjct: 138 NIQKESTLHLVL-------------RLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKI 184
Query: 204 LSSKILPREDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ +P + I + + D +L + ++ L++
Sbjct: 185 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 223
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 91 FPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGIELDDEFRNLSEYGIREFSE 150
+ IDV +DT+ ++K KI I+G P+ + L FSG LDD R L++Y I++ S
Sbjct: 10 LTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDG-RTLADYSIQKDSI 68
Query: 151 IIVFLKTMNRLRDNPPIRRLSFKVQTSSSLLNGASIPLEMQDSSTVNELRHLLLSSKILP 210
+ + L RL +Q L G +I LE++ S T++ ++ + + +P
Sbjct: 69 LHLAL-------------RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVP 115
Query: 211 REDYIFIHKQRIMRDNCSLRWHGVEYGDILYV 242
+ I + + D +L + ++ L++
Sbjct: 116 PDQQRLIFAGKQLDDGRTLADYNIQKESTLHL 147
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Query: 13 VLEVGLQEPVLEIKRKIEQIFNIPATSQTLAVSGWELVDGLDMEDYPIVKEGT-KIDLTI 71
LEV + +K KI+ IP Q L +G +L DG + DY I KE T + L +
Sbjct: 168 ALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 227
Query: 72 NPFLQSSFNQHDKIHIIIKFPSRKFNIDVDRTDTVRSLKEKIHIIDGTPIKRMLLFFSGI 131
+Q N + ++V+ +DT+ ++K KI + + L F+G
Sbjct: 228 CGGMQIFVN---------TLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGE 278
Query: 132 ELDDEFRNLSEYGIREFSEIIVFLK 156
+L+D + L++Y I++ S + + L+
Sbjct: 279 QLEDGYYTLADYNIQKESTLHLVLR 303
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,670,698
Number of Sequences: 539616
Number of extensions: 3602436
Number of successful extensions: 11615
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 10713
Number of HSP's gapped (non-prelim): 450
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)