BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045160
         (166 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|127709419|gb|ABO28750.1| knotted1-like homeobox transcription factor [Prunus persica]
 gi|289655992|gb|ADD14044.1| class 1 KNOTTED-like transcription factor KNOPE2 [Prunus persica]
          Length = 351

 Score =  209 bits (532), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 108/168 (64%), Positives = 131/168 (77%), Gaps = 5/168 (2%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSNT-----KDGAASSDEEYSGAETEAQDAEAR 58
           L  PF    +F  +  +  S  CT    +++      +G ASSDE++SG E E Q+ + R
Sbjct: 184 LSRPFDEATTFLNKIELQLSNLCTSSANASSIRTLSDEGGASSDEDFSGGEIEVQEGQQR 243

Query: 59  DEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADK 118
            +DR LKD+L+R+FGSHIG+LKLEFSKKKKKGKLPKE+RQTL DWW+ HYKWPYPTEADK
Sbjct: 244 GDDRDLKDRLMRRFGSHIGTLKLEFSKKKKKGKLPKEARQTLFDWWSVHYKWPYPTEADK 303

Query: 119 LQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           + LAESTGLDQ+QINNWFINQRKRHW+PSENM FAVMDN++GP FTDD
Sbjct: 304 IALAESTGLDQRQINNWFINQRKRHWRPSENMQFAVMDNIAGPFFTDD 351


>gi|224110918|ref|XP_002315682.1| predicted protein [Populus trichocarpa]
 gi|222864722|gb|EEF01853.1| predicted protein [Populus trichocarpa]
          Length = 309

 Score =  208 bits (529), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 112/161 (69%), Positives = 126/161 (78%), Gaps = 1/161 (0%)

Query: 7   PFAAWLSFFFEFIINPSEGCTGLKFSNTKD-GAASSDEEYSGAETEAQDAEARDEDRHLK 65
           PF    +F  +  +     CTG    +  D GA SSDEE SG E +  +A+   EDR LK
Sbjct: 148 PFDEATTFLNKIEMQLRNLCTGASIRSISDEGAPSSDEELSGGELDMHEAQPSGEDRELK 207

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
           DKLLR+FGSHIG+LKLEFSKKKKKGKLPKE+RQTLL WW+AHYKWPYPTEADK+ LAEST
Sbjct: 208 DKLLRRFGSHIGTLKLEFSKKKKKGKLPKEARQTLLGWWDAHYKWPYPTEADKIALAEST 267

Query: 126 GLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           GLDQKQINNWFINQRKRHWKPSEN+ FAVMDNLSG  FT+D
Sbjct: 268 GLDQKQINNWFINQRKRHWKPSENLQFAVMDNLSGQFFTED 308


>gi|255568864|ref|XP_002525403.1| homeobox protein knotted-1, putative [Ricinus communis]
 gi|223535366|gb|EEF37041.1| homeobox protein knotted-1, putative [Ricinus communis]
          Length = 337

 Score =  206 bits (525), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 109/161 (67%), Positives = 125/161 (77%), Gaps = 1/161 (0%)

Query: 7   PFAAWLSFFFEFIINPSEGCTGLKFSNTKD-GAASSDEEYSGAETEAQDAEARDEDRHLK 65
           PF    +F  +  +     CTG   S   D GA SSDEE SG E EAQ+A+   +DR LK
Sbjct: 177 PFDEATTFLNKIEMQLRNLCTGASVSTLSDEGAPSSDEELSGGELEAQEAQPSSKDRDLK 236

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
           D+L R+FGSHI +LKLEFSKKKKKGKLPKE+RQTLL+WWN HYKWPYPTEADK+ LA+ST
Sbjct: 237 DRLFRRFGSHISTLKLEFSKKKKKGKLPKEARQTLLEWWNVHYKWPYPTEADKIALADST 296

Query: 126 GLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           GLDQKQINNWFINQRKRHWKPSENM FAV+DN+SG  + DD
Sbjct: 297 GLDQKQINNWFINQRKRHWKPSENMQFAVVDNISGQFYIDD 337


>gi|356497567|ref|XP_003517631.1| PREDICTED: homeobox protein knotted-1-like 6-like [Glycine max]
          Length = 309

 Score =  204 bits (518), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 108/164 (65%), Positives = 127/164 (77%), Gaps = 1/164 (0%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSNTKD-GAASSDEEYSGAETEAQDAEARDEDR 62
           L  PF    +F  +  +  S  CTG   SN  D G  SSDE+ S  + +AQD + + EDR
Sbjct: 146 LARPFEEATTFLNKIEMQLSHLCTGASVSNVSDDGGVSSDEDLSTGDGDAQDGQLKGEDR 205

Query: 63  HLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLA 122
            LKD+LLRKFGSHIG+LKLEFSKKKKKGKLPKE+RQTLL WWN HYKWPYPTEADK++LA
Sbjct: 206 ELKDRLLRKFGSHIGTLKLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPTEADKIELA 265

Query: 123 ESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           +STGLDQKQINNWFINQRKRHWKPSENM F++M+NL+G    D+
Sbjct: 266 KSTGLDQKQINNWFINQRKRHWKPSENMQFSMMENLNGRFLADE 309


>gi|356501985|ref|XP_003519803.1| PREDICTED: homeobox protein knotted-1-like 6-like [Glycine max]
          Length = 308

 Score =  200 bits (509), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/164 (64%), Positives = 126/164 (76%), Gaps = 1/164 (0%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSNTKD-GAASSDEEYSGAETEAQDAEARDEDR 62
           L  PF    +F  +  +  S  CTG   SN  D G  SSDE+ S  + +AQD + + EDR
Sbjct: 145 LARPFDEATTFLNKIEMQLSHLCTGASVSNVSDDGGVSSDEDLSTGDGDAQDGQLKGEDR 204

Query: 63  HLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLA 122
            LKD+LLRKFGSHIG+LKLEFSKKKKKGKLPKE+RQ LL WWN HYKWPYPTEADK++LA
Sbjct: 205 ELKDRLLRKFGSHIGTLKLEFSKKKKKGKLPKEARQALLQWWNVHYKWPYPTEADKIELA 264

Query: 123 ESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           +STGLDQKQINNWFINQRKRHWKPSENM F++M+N +G +  D+
Sbjct: 265 KSTGLDQKQINNWFINQRKRHWKPSENMQFSMMENFNGRILADE 308


>gi|297850804|ref|XP_002893283.1| hypothetical protein ARALYDRAFT_472599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339125|gb|EFH69542.1| hypothetical protein ARALYDRAFT_472599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 329

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/166 (64%), Positives = 127/166 (76%), Gaps = 3/166 (1%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSN--TKDGAASSDEEYSGAETE-AQDAEARDE 60
           L  PF     F  +  +     CTG++ +   ++DGA SSDEE SG + E A+D + R E
Sbjct: 164 LARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGAISSDEELSGGDHELAEDGKQRCE 223

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           DR LKD+LLRKFGS I SLKLEFSKKKKKGKLP+E+RQ LLDWWN HYKWPYPTE DK+ 
Sbjct: 224 DRDLKDRLLRKFGSRISSLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIA 283

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           LA++TGLDQKQINNWFINQRKRHWKPSENM FA+MD+ SG  FT++
Sbjct: 284 LADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSGSFFTEE 329


>gi|9295701|gb|AAF87007.1|AC005292_16 F26F24.25 [Arabidopsis thaliana]
 gi|15991300|dbj|BAB69678.1| homeodomain transcription factor KNAT6 [Arabidopsis thaliana]
          Length = 324

 Score =  199 bits (505), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 105/166 (63%), Positives = 125/166 (75%), Gaps = 3/166 (1%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSN--TKDGAASSDEEYSGAETE-AQDAEARDE 60
           L  PF     F  +  +     CTG++ +   ++DG  SSDEE SG + E A+D   R E
Sbjct: 159 LARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGVISSDEELSGGDHEVAEDGRQRCE 218

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           DR LKD+LLRKFGS I +LKLEFSKKKKKGKLP+E+RQ LLDWWN HYKWPYPTE DK+ 
Sbjct: 219 DRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIA 278

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           LA++TGLDQKQINNWFINQRKRHWKPSENM FA+MD+ SG  FT++
Sbjct: 279 LADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSGSFFTEE 324


>gi|15991302|dbj|BAB69679.1| homeodomain transcription factor KNAT6 [Arabidopsis thaliana]
          Length = 326

 Score =  198 bits (504), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 105/166 (63%), Positives = 125/166 (75%), Gaps = 3/166 (1%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSN--TKDGAASSDEEYSGAETE-AQDAEARDE 60
           L  PF     F  +  +     CTG++ +   ++DG  SSDEE SG + E A+D   R E
Sbjct: 161 LARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGVISSDEELSGGDHEVAEDGRQRCE 220

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           DR LKD+LLRKFGS I +LKLEFSKKKKKGKLP+E+RQ LLDWWN HYKWPYPTE DK+ 
Sbjct: 221 DRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIA 280

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           LA++TGLDQKQINNWFINQRKRHWKPSENM FA+MD+ SG  FT++
Sbjct: 281 LADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSGSFFTEE 326


>gi|42570557|ref|NP_850951.2| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
 gi|75146711|sp|Q84JS6.1|KNAT6_ARATH RecName: Full=Homeobox protein knotted-1-like 6; AltName:
           Full=Protein KNAT6
 gi|27754596|gb|AAO22744.1| putative homeodomain transcription factor KNAT6 [Arabidopsis
           thaliana]
 gi|28393913|gb|AAO42364.1| putative homeodomain transcription factor KNAT6 [Arabidopsis
           thaliana]
 gi|332192260|gb|AEE30381.1| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
          Length = 327

 Score =  198 bits (504), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 105/166 (63%), Positives = 125/166 (75%), Gaps = 3/166 (1%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSN--TKDGAASSDEEYSGAETE-AQDAEARDE 60
           L  PF     F  +  +     CTG++ +   ++DG  SSDEE SG + E A+D   R E
Sbjct: 162 LARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGVISSDEELSGGDHEVAEDGRQRCE 221

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           DR LKD+LLRKFGS I +LKLEFSKKKKKGKLP+E+RQ LLDWWN HYKWPYPTE DK+ 
Sbjct: 222 DRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIA 281

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           LA++TGLDQKQINNWFINQRKRHWKPSENM FA+MD+ SG  FT++
Sbjct: 282 LADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSGSFFTEE 327


>gi|145336056|ref|NP_173752.3| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
 gi|332192259|gb|AEE30380.1| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
          Length = 329

 Score =  198 bits (504), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 105/166 (63%), Positives = 125/166 (75%), Gaps = 3/166 (1%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSN--TKDGAASSDEEYSGAETE-AQDAEARDE 60
           L  PF     F  +  +     CTG++ +   ++DG  SSDEE SG + E A+D   R E
Sbjct: 164 LARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGVISSDEELSGGDHEVAEDGRQRCE 223

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           DR LKD+LLRKFGS I +LKLEFSKKKKKGKLP+E+RQ LLDWWN HYKWPYPTE DK+ 
Sbjct: 224 DRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIA 283

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           LA++TGLDQKQINNWFINQRKRHWKPSENM FA+MD+ SG  FT++
Sbjct: 284 LADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSGSFFTEE 329


>gi|357485791|ref|XP_003613183.1| Knotted-1 homeobox protein [Medicago truncatula]
 gi|355514518|gb|AES96141.1| Knotted-1 homeobox protein [Medicago truncatula]
          Length = 316

 Score =  198 bits (503), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 106/168 (63%), Positives = 127/168 (75%), Gaps = 5/168 (2%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKF-----SNTKDGAASSDEEYSGAETEAQDAEAR 58
           L  PF    +F  +     S  CTG        + + DG ASSDE+ S  + + QD ++R
Sbjct: 149 LTRPFDEATTFLNKIETQLSHLCTGGAAAASLPTASDDGGASSDEDLSTGDGDVQDGQSR 208

Query: 59  DEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADK 118
            EDR LKD+LLRKFGSHIG+LKLEFSKKKKKGKLPKE+RQTLL WWN HYKWPYPTEADK
Sbjct: 209 GEDRELKDRLLRKFGSHIGTLKLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPTEADK 268

Query: 119 LQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           ++LA+STGLDQKQINNWFINQRKRHWKPSENM F++M+N +G   T++
Sbjct: 269 IELAKSTGLDQKQINNWFINQRKRHWKPSENMQFSMMENFTGRFLTEE 316


>gi|388517925|gb|AFK47024.1| unknown [Medicago truncatula]
          Length = 316

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/168 (62%), Positives = 127/168 (75%), Gaps = 5/168 (2%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKF-----SNTKDGAASSDEEYSGAETEAQDAEAR 58
           L  PF    +F  +     S  CTG        + + DG ASSDE+ S  + + QD +++
Sbjct: 149 LTRPFDEATTFLNKIETQLSHLCTGGAAAASLPTASDDGGASSDEDLSTGDGDVQDGQSK 208

Query: 59  DEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADK 118
            EDR LKD+LLRKFGSHIG+LKLEFSKKKKKGKLPKE+RQTLL WWN HYKWPYPTEADK
Sbjct: 209 GEDRELKDRLLRKFGSHIGTLKLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPTEADK 268

Query: 119 LQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           ++LA+STGLDQKQINNWFINQRKRHWKPSENM F++M+N +G   T++
Sbjct: 269 IELAKSTGLDQKQINNWFINQRKRHWKPSENMQFSMMENFTGRFLTEE 316


>gi|224102455|ref|XP_002312684.1| predicted protein [Populus trichocarpa]
 gi|222852504|gb|EEE90051.1| predicted protein [Populus trichocarpa]
          Length = 337

 Score =  195 bits (496), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 102/134 (76%), Positives = 112/134 (83%)

Query: 33  NTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           N  DGA SSD+E SG E +  +A+   EDR LKDKLLR+FG HIG+LK EFSKKKKKGKL
Sbjct: 204 NGSDGAPSSDDELSGGEMDMHEAQPSGEDRELKDKLLRRFGGHIGTLKREFSKKKKKGKL 263

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHF 152
           PKE+RQTLL WWN HYKWPYPTEADKL LAESTGLDQKQINNWFINQRKRHWKPSEN+ F
Sbjct: 264 PKEARQTLLGWWNVHYKWPYPTEADKLALAESTGLDQKQINNWFINQRKRHWKPSENLQF 323

Query: 153 AVMDNLSGPLFTDD 166
           AVM+NLSG    +D
Sbjct: 324 AVMNNLSGQFLAED 337


>gi|8778590|gb|AAF79598.1|AC007945_18 F28C11.2 [Arabidopsis thaliana]
          Length = 344

 Score =  195 bits (495), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 100/139 (71%), Positives = 114/139 (82%), Gaps = 1/139 (0%)

Query: 29  LKFSNTKDGAASSDEEYSGAETE-AQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKK 87
           L   N +DG  SSDEE SG + E A+D   R EDR LKD+LLRKFGS I +LKLEFSKKK
Sbjct: 206 LTNDNGEDGVISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKK 265

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           KKGKLP+E+RQ LLDWWN HYKWPYPTE DK+ LA++TGLDQKQINNWFINQRKRHWKPS
Sbjct: 266 KKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPS 325

Query: 148 ENMHFAVMDNLSGPLFTDD 166
           ENM FA+MD+ SG  FT++
Sbjct: 326 ENMPFAMMDDSSGSFFTEE 344


>gi|4589884|dbj|BAA76905.1| homeobox 22 [Nicotiana tabacum]
          Length = 319

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/163 (66%), Positives = 117/163 (71%), Gaps = 7/163 (4%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRH 63
           L  PF    +F  +  +  S  C         DG  SSDEE S  E E QDA  R ED  
Sbjct: 164 LSRPFDEATTFLSKIELQLSNLCKD-------DGGVSSDEELSCGEVEGQDASQRSEDNE 216

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LKD+LLRKFGSH+ +LKLEFSKKKKKGKLPKE+RQ LL WWN HY+WPYPTEADK  LAE
Sbjct: 217 LKDRLLRKFGSHLSTLKLEFSKKKKKGKLPKEARQMLLAWWNDHYRWPYPTEADKNSLAE 276

Query: 124 STGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           STGLD KQINNWFINQRKRHWKPSENM  AVMDNLSG  F+DD
Sbjct: 277 STGLDPKQINNWFINQRKRHWKPSENMQLAVMDNLSGQFFSDD 319


>gi|225425603|ref|XP_002263313.1| PREDICTED: homeobox protein knotted-1-like 6 [Vitis vinifera]
 gi|297739081|emb|CBI28570.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/164 (65%), Positives = 123/164 (75%), Gaps = 2/164 (1%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSNTKDGAA-SSDEEYSGAETEAQDAEARDEDR 62
           L  PF    +F  +  +     C      +  D A  SSDE++SG E E Q+A+ R ED+
Sbjct: 156 LARPFDEATTFLNKIEMQLGNLCNDASIRSLPDEAVVSSDEDFSGGE-EVQEAQPRGEDQ 214

Query: 63  HLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLA 122
            LK++LLR+FG  I SLKLEFSKKKKKGKLPKE+RQTLL+WWN HYKWPYPTEADK+ LA
Sbjct: 215 ELKERLLRRFGGRISSLKLEFSKKKKKGKLPKEARQTLLEWWNLHYKWPYPTEADKIALA 274

Query: 123 ESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           E+TGLDQKQINNWFINQRKRHWKPSENM FAVMDN SG  FTDD
Sbjct: 275 ETTGLDQKQINNWFINQRKRHWKPSENMQFAVMDNHSGQFFTDD 318


>gi|89953327|gb|ABD83273.1| Fgenesh protein 1 [Beta vulgaris]
          Length = 158

 Score =  191 bits (485), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 98/149 (65%), Positives = 114/149 (76%), Gaps = 18/149 (12%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           +G  SSDE+YSG E + QD + +DE+R LKD+LLR+FGSHI SLKLEFSKKKKKGKLP+E
Sbjct: 10  EGVVSSDEDYSGGEIDVQDLQPKDEERDLKDQLLRRFGSHISSLKLEFSKKKKKGKLPRE 69

Query: 96  SRQTLLDWWNAHYKWPYPT------------------EADKLQLAESTGLDQKQINNWFI 137
           +RQ L +WWNAHYKWPYPT                  EADK+ LAE TGLDQ+QINNWFI
Sbjct: 70  ARQMLFEWWNAHYKWPYPTLAWTYVSIISQHPAIAVQEADKIALAEMTGLDQRQINNWFI 129

Query: 138 NQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           NQRKRHWKPSENM +A+M+N SG  FTDD
Sbjct: 130 NQRKRHWKPSENMQYALMENFSGQYFTDD 158


>gi|189046914|dbj|BAG34610.1| class-I knotted1-like homeobox protein IBKN4 [Ipomoea batatas]
          Length = 314

 Score =  191 bits (485), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 99/130 (76%), Positives = 114/130 (87%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G ASSDEE SG ET+ Q++  + E+R LK+ LLRK+GSH+ SLKLEFSKKKKKGKLPKE+
Sbjct: 183 GGASSDEEDSGGETDIQESITKTEERQLKNTLLRKYGSHLSSLKLEFSKKKKKGKLPKEA 242

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQTLLDWW+ HYKWPYPTEADK+ LAESTGLDQKQINNWFINQRKRHWKPSE+M  AVM+
Sbjct: 243 RQTLLDWWSDHYKWPYPTEADKIALAESTGLDQKQINNWFINQRKRHWKPSESMQLAVME 302

Query: 157 NLSGPLFTDD 166
           NL+G LF+ D
Sbjct: 303 NLTGQLFSSD 312


>gi|300676307|gb|ADK26523.1| HERMIT-like protein 2 [Petunia x hybrida]
          Length = 332

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/131 (75%), Positives = 110/131 (83%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           DG+ SSDEE+S  E E QDA  R ED  LKD+LLRKFGSH+ +LKLEFSKKKKKGKLPKE
Sbjct: 202 DGSLSSDEEFSCGEAEVQDASMRSEDNELKDRLLRKFGSHLSTLKLEFSKKKKKGKLPKE 261

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LL WWN HY+WPYPTEADK  LAESTGLD KQINNWFINQRKRHW+PSENM  AVM
Sbjct: 262 ARQMLLAWWNDHYRWPYPTEADKNSLAESTGLDPKQINNWFINQRKRHWEPSENMQLAVM 321

Query: 156 DNLSGPLFTDD 166
           DN+SG  ++DD
Sbjct: 322 DNISGQFYSDD 332


>gi|356526781|ref|XP_003531995.1| PREDICTED: homeobox protein knotted-1-like 6-like [Glycine max]
          Length = 317

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/164 (60%), Positives = 123/164 (75%), Gaps = 1/164 (0%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKF-SNTKDGAASSDEEYSGAETEAQDAEARDEDR 62
           L  PF    +F  +     ++ C+G    + + DG  SS+E +S  + + QD + R EDR
Sbjct: 154 LTRPFDEATTFLNKIETQLTDLCSGSSLLTLSDDGGVSSEEGFSAGDGDPQDGQLRSEDR 213

Query: 63  HLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLA 122
            LKD+LLRKFGSHIG LKLEFSKKKK+GKLPK++RQTLL WWN HYKWPYPTE DK+ LA
Sbjct: 214 ELKDRLLRKFGSHIGYLKLEFSKKKKRGKLPKDARQTLLQWWNIHYKWPYPTEGDKIALA 273

Query: 123 ESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           +STGLDQKQINNWFINQRKRHWKPSENM F+++D L+G   TD+
Sbjct: 274 KSTGLDQKQINNWFINQRKRHWKPSENMPFSMVDGLTGRFLTDE 317


>gi|449516639|ref|XP_004165354.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
           6-like [Cucumis sativus]
          Length = 324

 Score =  189 bits (481), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/164 (65%), Positives = 121/164 (73%), Gaps = 4/164 (2%)

Query: 7   PFAAWLSFFFEFIINPSEGCTG-LKFSNTKDGAASSDEEYSGAETEAQDAEA--RDEDRH 63
           PF    +F  +  +  S  C G    S + DGA SSDEE SG E E  +AEA  + E+R 
Sbjct: 161 PFDEATTFLNKIELQLSNLCNGAFSRSLSDDGAVSSDEELSGGEMEVVEAEAQTKGENRD 220

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LKDKLLR+FGSHI +LKLEFSK KKKGKLPKE+RQTL +WWN HYKWPYPTEADK+ LAE
Sbjct: 221 LKDKLLRRFGSHISTLKLEFSKXKKKGKLPKEARQTLFEWWNVHYKWPYPTEADKVALAE 280

Query: 124 STGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL-SGPLFTDD 166
            TGLDQKQINNWFINQRKRHWKPSENM F  MD L SG  F +D
Sbjct: 281 RTGLDQKQINNWFINQRKRHWKPSENMQFEGMDGLSSGRFFRED 324


>gi|356567652|ref|XP_003552031.1| PREDICTED: homeobox protein knotted-1-like 6-like isoform 1
           [Glycine max]
          Length = 320

 Score =  185 bits (470), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 92/133 (69%), Positives = 112/133 (84%)

Query: 34  TKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLP 93
           + DG  SS+E +S  + + QD + R EDR LKD+LLR+FGSH+GSLKLEFSKKKK+GKLP
Sbjct: 188 SNDGGVSSEEGFSAGDGDPQDGQLRSEDRELKDRLLRRFGSHVGSLKLEFSKKKKRGKLP 247

Query: 94  KESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFA 153
           K++RQTLL WWN HYKWPYPTE DK+ LA+STGLDQKQINNWFINQRKR+WKPSENM F+
Sbjct: 248 KDARQTLLQWWNIHYKWPYPTEGDKIALAKSTGLDQKQINNWFINQRKRYWKPSENMPFS 307

Query: 154 VMDNLSGPLFTDD 166
           ++D L+G   TD+
Sbjct: 308 MVDGLTGRFLTDE 320


>gi|356567654|ref|XP_003552032.1| PREDICTED: homeobox protein knotted-1-like 6-like isoform 2
           [Glycine max]
          Length = 324

 Score =  185 bits (469), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 92/131 (70%), Positives = 111/131 (84%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           DG  SS+E +S  + + QD + R EDR LKD+LLR+FGSH+GSLKLEFSKKKK+GKLPK+
Sbjct: 194 DGGVSSEEGFSAGDGDPQDGQLRSEDRELKDRLLRRFGSHVGSLKLEFSKKKKRGKLPKD 253

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQTLL WWN HYKWPYPTE DK+ LA+STGLDQKQINNWFINQRKR+WKPSENM F+++
Sbjct: 254 ARQTLLQWWNIHYKWPYPTEGDKIALAKSTGLDQKQINNWFINQRKRYWKPSENMPFSMV 313

Query: 156 DNLSGPLFTDD 166
           D L+G   TD+
Sbjct: 314 DGLTGRFLTDE 324


>gi|3327271|dbj|BAA31699.1| PKn2 [Ipomoea nil]
          Length = 322

 Score =  185 bits (469), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 98/131 (74%), Positives = 113/131 (86%), Gaps = 1/131 (0%)

Query: 37  GAASSDEEYSGAETEAQ-DAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           GA SSDEE SG ET+ Q ++  + E+R LK+ LLRK+GSH+ SLKLEFSKKKKKGKLPKE
Sbjct: 190 GAVSSDEEDSGGETDIQQESITKTEERQLKNTLLRKYGSHLSSLKLEFSKKKKKGKLPKE 249

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQTLLDWW+ HYKWPYPTEADK+ LAESTGLDQKQINNWFINQRKRHWKPSE+M  AVM
Sbjct: 250 ARQTLLDWWSDHYKWPYPTEADKIALAESTGLDQKQINNWFINQRKRHWKPSESMQLAVM 309

Query: 156 DNLSGPLFTDD 166
           +NL+G  F+ D
Sbjct: 310 ENLTGQFFSSD 320


>gi|984046|emb|CAA57122.1| ATK1 [Arabidopsis thaliana]
 gi|984048|emb|CAA57121.1| ATK1 [Arabidopsis thaliana]
          Length = 311

 Score =  185 bits (469), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 101/166 (60%), Positives = 118/166 (71%), Gaps = 3/166 (1%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSN--TKDGAASSDEEY-SGAETEAQDAEARDE 60
           L  PF    +F  +  +     CTG   +   + DGA SSDEE     +  A D++ R  
Sbjct: 146 LARPFDEATTFINKIEMQLQNLCTGPASATALSDDGAVSSDEELREDDDIAADDSQQRSN 205

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           DR LKD+LLRKFGSHI SLKLEFSKKKKKGKLP+E+RQ LLDWWN H KWPYPTE DK+ 
Sbjct: 206 DRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDKIA 265

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           LAE TGLDQKQINNWFINQRKRHWKPSENM F +MD+ +   FT++
Sbjct: 266 LAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDDSNETFFTEE 311


>gi|42563111|ref|NP_177208.2| homeobox protein knotted-1-like 2 [Arabidopsis thaliana]
 gi|21431769|sp|P46640.3|KNAT2_ARATH RecName: Full=Homeobox protein knotted-1-like 2; AltName:
           Full=Protein ATK1; AltName: Full=Protein KNAT2
 gi|606952|gb|AAA67882.1| knotted-like homeobox protein [Arabidopsis thaliana]
 gi|332196952|gb|AEE35073.1| homeobox protein knotted-1-like 2 [Arabidopsis thaliana]
          Length = 310

 Score =  184 bits (468), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 101/165 (61%), Positives = 117/165 (70%), Gaps = 3/165 (1%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSN--TKDGAASSDEEY-SGAETEAQDAEARDE 60
           L  PF    +F  +  +     CTG   +   + DGA SSDEE     +  A D++ R  
Sbjct: 146 LARPFDEATTFINKIEMQLQNLCTGPASATALSDDGAVSSDEELREDDDIAADDSQQRSN 205

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           DR LKD+LLRKFGSHI SLKLEFSKKKKKGKLP+E+RQ LLDWWN H KWPYPTE DK+ 
Sbjct: 206 DRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDKIS 265

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTD 165
           LAE TGLDQKQINNWFINQRKRHWKPSENM F +MD+ +   FT+
Sbjct: 266 LAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDDSNETFFTE 310


>gi|3327273|dbj|BAA31700.1| short product from PKn2 alternative splicing [Ipomoea nil]
          Length = 237

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/131 (74%), Positives = 113/131 (86%), Gaps = 1/131 (0%)

Query: 37  GAASSDEEYSGAETEAQ-DAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           GA SSDEE SG ET+ Q ++  + E+R LK+ LLRK+GSH+ SLKLEFSKKKKKGKLPKE
Sbjct: 105 GAVSSDEEDSGGETDIQQESITKTEERQLKNTLLRKYGSHLSSLKLEFSKKKKKGKLPKE 164

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQTLLDWW+ HYKWPYPTEADK+ LAESTGLDQKQINNWFINQRKRHWKPSE+M  AVM
Sbjct: 165 ARQTLLDWWSDHYKWPYPTEADKIALAESTGLDQKQINNWFINQRKRHWKPSESMQLAVM 224

Query: 156 DNLSGPLFTDD 166
           +NL+G  F+ D
Sbjct: 225 ENLTGQFFSSD 235


>gi|25386225|pir||A96729 homeotic protein (ATK1), 26548-32058 [imported] - Arabidopsis
           thaliana
 gi|12325041|gb|AAG52468.1|AC010796_7 homeotic protein (ATK1); 26548-32058 [Arabidopsis thaliana]
          Length = 311

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/166 (60%), Positives = 117/166 (70%), Gaps = 4/166 (2%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFS---NTKDGAASSDEEY-SGAETEAQDAEARD 59
           L  PF    +F  +  +     CTG   +   +  DGA SSDEE     +  A D++ R 
Sbjct: 146 LARPFDEATTFINKIEMQLQNLCTGPASATALSADDGAVSSDEELREDDDIAADDSQQRS 205

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
            DR LKD+LLRKFGSHI SLKLEFSKKKKKGKLP+E+RQ LLDWWN H KWPYPTE DK+
Sbjct: 206 NDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDKI 265

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTD 165
            LAE TGLDQKQINNWFINQRKRHWKPSENM F +MD+ +   FT+
Sbjct: 266 SLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDDSNETFFTE 311


>gi|255540617|ref|XP_002511373.1| homeobox protein knotted-1, putative [Ricinus communis]
 gi|223550488|gb|EEF51975.1| homeobox protein knotted-1, putative [Ricinus communis]
          Length = 328

 Score =  182 bits (461), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 99/165 (60%), Positives = 121/165 (73%), Gaps = 2/165 (1%)

Query: 4   LYLPFAAWLSFF--FEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDED 61
           L  PF    +F    E  +N     T  +   + +   SSDE+ SG E EAQD+   +E+
Sbjct: 164 LSRPFNEATTFLNDIEAQLNTLCNTTTSRTHVSDEAVGSSDEDISGGELEAQDSVRANEE 223

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           R LKDKLL+K+  +I +LK EFSKKKKKGKLPKE+RQ LL+WWN HYKWPYPTEADK+ L
Sbjct: 224 RELKDKLLQKYSGYISTLKQEFSKKKKKGKLPKEARQILLNWWNIHYKWPYPTEADKVAL 283

Query: 122 AESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           A++TGLDQKQINNWFINQRKRHWKPSENM FAV+D++ GP F +D
Sbjct: 284 ADATGLDQKQINNWFINQRKRHWKPSENMQFAVVDSIYGPFFMND 328


>gi|225456981|ref|XP_002282076.1| PREDICTED: homeobox protein knotted-1-like 6 [Vitis vinifera]
 gi|297733756|emb|CBI15003.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  181 bits (459), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 96/142 (67%), Positives = 110/142 (77%), Gaps = 1/142 (0%)

Query: 26  CTGLKFSNTKDGAA-SSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFS 84
           C G   S   D AA SS+E+ SG E E Q+     E++ LKDKLLRK+  +I +LK EFS
Sbjct: 178 CNGASRSYVSDEAAGSSEEDLSGGEVEVQECLQTTENQELKDKLLRKYSGYISTLKHEFS 237

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           K KKKGKLPKE+RQ LLDWWN HYKWPYPTE DK+ LAESTGLDQKQINNWFINQRKRHW
Sbjct: 238 KTKKKGKLPKEARQALLDWWNIHYKWPYPTEEDKIALAESTGLDQKQINNWFINQRKRHW 297

Query: 145 KPSENMHFAVMDNLSGPLFTDD 166
           KPSENM FAVMD++ GP F ++
Sbjct: 298 KPSENMQFAVMDSIYGPFFMNE 319


>gi|297838847|ref|XP_002887305.1| hypothetical protein ARALYDRAFT_476175 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333146|gb|EFH63564.1| hypothetical protein ARALYDRAFT_476175 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 310

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/166 (59%), Positives = 117/166 (70%), Gaps = 3/166 (1%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSN--TKDGAASSDEEYSGAE-TEAQDAEARDE 60
           L  PF    +F  +  +     CTG   +   + DGA SSDEE    +   AQD++ R  
Sbjct: 145 LARPFDEAATFINKIEMQLQNLCTGPASATALSDDGALSSDEELREDDHVTAQDSQQRSN 204

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           DR LKD+LLRKFGSHI SLKLEFSKKKKKGKLP+E+RQ L DWWN HYKWPYPTE DK+ 
Sbjct: 205 DRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALFDWWNVHYKWPYPTEGDKIA 264

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           LA  TGL+QKQINNWFINQRKRHWKPSENM F +MD+ +    T++
Sbjct: 265 LAGETGLNQKQINNWFINQRKRHWKPSENMPFDMMDDSNETFLTEE 310


>gi|60476416|gb|AAX21347.1| homeobox knotted-1-like protein KNOX3 [Lotus japonicus]
          Length = 227

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/150 (66%), Positives = 115/150 (76%), Gaps = 2/150 (1%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSNTKD-GAASSDEEYSGAETEAQDAEA-RDED 61
           L  PF    +F  +  +  S  CTG       D G  SSDEE+S  + +AQD +  R ED
Sbjct: 77  LARPFDEASNFLNKIEMQLSNLCTGASVPTLSDEGGVSSDEEFSTGDGDAQDGQQLRGED 136

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           R LKD+LLRKFGSHIG+LKLEFSKKKKKGKLPKE+RQTLL WWN HYKWPYPTE+DK++L
Sbjct: 137 RELKDRLLRKFGSHIGTLKLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPTESDKIEL 196

Query: 122 AESTGLDQKQINNWFINQRKRHWKPSENMH 151
           A++TGLDQKQINNWFINQRKRHWKPSENM 
Sbjct: 197 AKATGLDQKQINNWFINQRKRHWKPSENMQ 226


>gi|371767708|gb|AEX56209.1| knotted-like 4 protein [Dactylorhiza fuchsii]
          Length = 279

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/164 (59%), Positives = 117/164 (71%), Gaps = 2/164 (1%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRH 63
           L  PF    +F     I  S+ C    F  + +   SS+EE SG E E  +  ++DE+R 
Sbjct: 117 LAQPFDEATAFLNTIEIQLSDLCKPAAFI-SDEAVGSSEEELSGGEVEVPELHSKDEERD 175

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK+KLLRK+  ++ SLK EFSKKK+KGKLP+E+RQ LLDWW AHYKWPYPTEADK+ LAE
Sbjct: 176 LKEKLLRKYSGYLSSLKKEFSKKKRKGKLPREARQLLLDWWTAHYKWPYPTEADKISLAE 235

Query: 124 STGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG-PLFTDD 166
           +TGLDQKQINNW INQRKRHWKPSENM FA++D  S   LF DD
Sbjct: 236 TTGLDQKQINNWLINQRKRHWKPSENMQFAIVDGFSASSLFADD 279


>gi|147810349|emb|CAN60889.1| hypothetical protein VITISV_041259 [Vitis vinifera]
          Length = 328

 Score =  178 bits (452), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 91/131 (69%), Positives = 106/131 (80%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           + A SS+E+ SG E E Q+     E++ LKDKLLRK+  +I +LK EFSK KKKGKLPKE
Sbjct: 198 EAAGSSEEDLSGGEVEVQECLQTTENQELKDKLLRKYSGYISTLKHEFSKTKKKGKLPKE 257

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LLDWWN HYKWPYPTE DK+ LAESTGLDQKQINNWFINQRKRHWKPSENM FAVM
Sbjct: 258 ARQALLDWWNIHYKWPYPTEEDKIALAESTGLDQKQINNWFINQRKRHWKPSENMQFAVM 317

Query: 156 DNLSGPLFTDD 166
           D++ GP F ++
Sbjct: 318 DSIYGPFFMNE 328


>gi|147834631|emb|CAN74134.1| hypothetical protein VITISV_013680 [Vitis vinifera]
          Length = 157

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/153 (65%), Positives = 113/153 (73%), Gaps = 23/153 (15%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           +   SSDE++SG E E Q+A+ R ED+ LK++LLR+FG  I SLKLEFSKKKKKGKLPKE
Sbjct: 6   EAVVSSDEDFSGGE-EVQEAQPRGEDQELKERLLRRFGGRISSLKLEFSKKKKKGKLPKE 64

Query: 96  SRQTLLDWWNAHYKWPYPT----------------------EADKLQLAESTGLDQKQIN 133
           +RQTLL+WWN HYKWPYPT                      EADK+ LAE+TGLDQKQIN
Sbjct: 65  ARQTLLEWWNLHYKWPYPTYFCFAAVMDLVLLVYLYVAIVXEADKIALAETTGLDQKQIN 124

Query: 134 NWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           NWFINQRKRHWKPSENM FAVMDN SG  FTDD
Sbjct: 125 NWFINQRKRHWKPSENMQFAVMDNHSGQFFTDD 157


>gi|1814234|gb|AAB41849.1| POTH1 [Solanum tuberosum]
          Length = 345

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/131 (74%), Positives = 104/131 (79%), Gaps = 3/131 (2%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           DG  SSDEE S  E    DA  R ED  LKD+LLRKFGSH+ SLKLEFSKKKKKGKLPKE
Sbjct: 217 DGGVSSDEELSCGEA---DASMRSEDNELKDRLLRKFGSHLSSLKLEFSKKKKKGKLPKE 273

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LL WW+ H++WPYPTEADK  LAESTGLD KQINNWFINQRKRHWKPSENM  AVM
Sbjct: 274 ARQMLLAWWDDHFRWPYPTEADKNSLAESTGLDPKQINNWFINQRKRHWKPSENMQLAVM 333

Query: 156 DNLSGPLFTDD 166
           DNLS   F+ D
Sbjct: 334 DNLSSQFFSSD 344


>gi|224133590|ref|XP_002321612.1| predicted protein [Populus trichocarpa]
 gi|222868608|gb|EEF05739.1| predicted protein [Populus trichocarpa]
          Length = 275

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/141 (66%), Positives = 112/141 (79%), Gaps = 4/141 (2%)

Query: 30  KFSNTKDGAA----SSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSK 85
           +F+   +GA+    SSDE+ SG + E QD    +EDR LKDKLL K+  +I +LK EFSK
Sbjct: 135 QFNTLCNGASRTVGSSDEDASGGDAEVQDCTRANEDRELKDKLLCKYSGYISTLKHEFSK 194

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           KKKKGKLPKE+R+ LL+WW  HYKWPYPTEADK+ LAESTGL+QKQINNWFINQRKRHWK
Sbjct: 195 KKKKGKLPKEAREVLLNWWTVHYKWPYPTEADKVALAESTGLEQKQINNWFINQRKRHWK 254

Query: 146 PSENMHFAVMDNLSGPLFTDD 166
           PSENM FAV+D+L GP F +D
Sbjct: 255 PSENMQFAVVDSLYGPFFMND 275


>gi|345649239|gb|AEO14150.1| KNAT2/6 protein [Eschscholzia californica subsp. californica]
          Length = 355

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 91/134 (67%), Positives = 107/134 (79%)

Query: 33  NTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           N+ +   SS+++ SG E E Q+ + R EDR +KDKLLRK+  +I SLK EFSKKKKKGKL
Sbjct: 222 NSDEIVGSSEDDLSGGEIEVQEVQPRLEDREMKDKLLRKYSGYISSLKQEFSKKKKKGKL 281

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHF 152
           PK++RQ L DWWN H KWPYPTEADK+ LAESTGLDQKQINNWFINQRKRHWKPSENM F
Sbjct: 282 PKDARQILFDWWNVHNKWPYPTEADKIALAESTGLDQKQINNWFINQRKRHWKPSENMQF 341

Query: 153 AVMDNLSGPLFTDD 166
             MD++S P F +D
Sbjct: 342 GDMDSISTPFFIND 355


>gi|224121810|ref|XP_002318678.1| predicted protein [Populus trichocarpa]
 gi|222859351|gb|EEE96898.1| predicted protein [Populus trichocarpa]
          Length = 266

 Score =  175 bits (443), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 92/128 (71%), Positives = 105/128 (82%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           + A SSDE+ SG E   QD+   +EDR LKDKLLRK+  +I +LK  FSK+KKKGKLPKE
Sbjct: 139 EAAGSSDEDASGGEAGMQDSTRINEDRELKDKLLRKYSGYISTLKHAFSKQKKKGKLPKE 198

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LL+WWN H KWPYPTEADK+ LAESTGLDQKQINNWFINQRKRHWKPSENM FAV+
Sbjct: 199 ARQILLNWWNIHNKWPYPTEADKVALAESTGLDQKQINNWFINQRKRHWKPSENMQFAVV 258

Query: 156 DNLSGPLF 163
           D+L GP F
Sbjct: 259 DSLYGPFF 266


>gi|3327269|dbj|BAA31698.1| PKn1 [Ipomoea nil]
          Length = 333

 Score =  175 bits (443), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 102/123 (82%)

Query: 44  EYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDW 103
           EYSG E E QD+  + EDR LK +LL+K+G HI SLKLEFSKKKKKGKLPK++RQ LL+W
Sbjct: 211 EYSGGEAEEQDSAVKGEDRELKSRLLQKYGGHISSLKLEFSKKKKKGKLPKDARQILLEW 270

Query: 104 WNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLF 163
           W  HY+WPYPTE DK+ LAE TGLDQKQINNWFINQRKRHWKPSE+M  AVMDNL+G  F
Sbjct: 271 WKGHYRWPYPTEDDKISLAELTGLDQKQINNWFINQRKRHWKPSEHMQLAVMDNLAGQFF 330

Query: 164 TDD 166
           T D
Sbjct: 331 TQD 333


>gi|7581979|emb|CAB88029.1| knotted1-like homeobox protein [Dendrobium grex Madame Thong-In]
          Length = 286

 Score =  174 bits (442), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 99/166 (59%), Positives = 118/166 (71%), Gaps = 6/166 (3%)

Query: 7   PFAAWLSFFFEFIINPSEGC-----TGLKFSNTKDGAASSDEEYSGAETEAQDAEARDED 61
           PF    +F     +  S+ C       L    + +   SSDEE SG E EA ++  + E+
Sbjct: 121 PFDEATAFLNTMEVQLSDLCKPTCRAALGPYVSDEAVGSSDEELSGGEGEAPESHLKGEE 180

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           R LK+KLLRK+  ++ SLK EFSKKKKKGKLPKE+RQ L +WW AHYKWPYPTEADK+ L
Sbjct: 181 RDLKEKLLRKYSGYLSSLKQEFSKKKKKGKLPKEARQILFEWWTAHYKWPYPTEADKIAL 240

Query: 122 AESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS-GPLFTDD 166
           AE+TGLDQKQINNWFINQRKRHWKP+ENMHF+VMDN S   LF DD
Sbjct: 241 AEATGLDQKQINNWFINQRKRHWKPAENMHFSVMDNSSTSSLFADD 286


>gi|307335624|gb|ADN43389.1| KNOX2 [Agave tequilana]
          Length = 291

 Score =  174 bits (442), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 93/130 (71%), Positives = 104/130 (80%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
            A SSDEE SG ETE Q+   + E   LK+KLLRK+  ++ SLK EFSKKKKKGKLPKE+
Sbjct: 162 AAGSSDEEVSGGETEVQEFHLKGESGDLKEKLLRKYSGYLSSLKREFSKKKKKGKLPKEA 221

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL+WW AHYKWPYPTE DK  LAESTGLDQKQINNWFINQRKRHWKPSE+M FAVM 
Sbjct: 222 RQMLLEWWTAHYKWPYPTEGDKTALAESTGLDQKQINNWFINQRKRHWKPSESMQFAVMG 281

Query: 157 NLSGPLFTDD 166
           +LS P + DD
Sbjct: 282 SLSAPFYDDD 291


>gi|188528488|emb|CAD58394.2| putative knotted-1-like protein [Helianthus tuberosus]
          Length = 348

 Score =  173 bits (438), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/147 (57%), Positives = 101/147 (68%), Gaps = 8/147 (5%)

Query: 28  GLKFSNTKDGAASSDEEYSGAETEAQDAEARD--------EDRHLKDKLLRKFGSHIGSL 79
            + FSN+  G      + +G+  E  D +  +        EDR LK +LLRK+  ++GSL
Sbjct: 189 AITFSNSDSGCGEGGMDRNGSSEEELDVDMNNNGMVDPQAEDRELKGQLLRKYSGYLGSL 248

Query: 80  KLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQ 139
           K EF KK+K+GKLPKE+RQ LLDWW  HYKWPYP+EA KL LAESTGLDQKQINNWFINQ
Sbjct: 249 KQEFMKKRKEGKLPKEARQQLLDWWTRHYKWPYPSEAQKLALAESTGLDQKQINNWFINQ 308

Query: 140 RKRHWKPSENMHFAVMDNLSGPLFTDD 166
           RKRHWKPSE+M F VMD      F D+
Sbjct: 309 RKRHWKPSEDMQFVVMDAAHPHYFIDN 335


>gi|73918027|gb|AAZ93630.1| transcription factor Knat6 [Eschscholzia californica]
          Length = 228

 Score =  171 bits (434), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 103/124 (83%)

Query: 33  NTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           N+ +   SS+++ SG E E Q+ + R EDR +KDKLLRK+  +I SLK EFSKKKKKGKL
Sbjct: 105 NSDEIVGSSEDDLSGGEIEVQEVQPRLEDREMKDKLLRKYSGYISSLKQEFSKKKKKGKL 164

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHF 152
           PK++RQ L DWWN H KWPYPTEADK+ LAESTGLDQKQINNWFINQRKRHWKP+ENMHF
Sbjct: 165 PKDARQILFDWWNVHNKWPYPTEADKIALAESTGLDQKQINNWFINQRKRHWKPAENMHF 224

Query: 153 AVMD 156
           +VMD
Sbjct: 225 SVMD 228


>gi|371767740|gb|AEX56225.1| knotted-like 1 protein [Gymnadenia conopsea]
          Length = 179

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/161 (60%), Positives = 118/161 (73%), Gaps = 2/161 (1%)

Query: 7   PFAAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKD 66
           PF    +F     I  S+ C    F  + +   SS+EE SG E E  +  ++DE+R LK+
Sbjct: 20  PFDEATAFLNTIEIQLSDLCKPAAFI-SDEAVGSSEEELSGGEVEVPELHSKDEERDLKE 78

Query: 67  KLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTG 126
           KLLRK+  ++ SLK EFSKKKKKGKLP+E+RQ LLDWW AHYKWPYPTEADK+ LAE+TG
Sbjct: 79  KLLRKYSGYLSSLKKEFSKKKKKGKLPREARQLLLDWWTAHYKWPYPTEADKISLAETTG 138

Query: 127 LDQKQINNWFINQRKRHWKPSENMHFAVMDNL-SGPLFTDD 166
           LDQKQINNWFINQRKRHWKPSENM FA++D+  +  LF DD
Sbjct: 139 LDQKQINNWFINQRKRHWKPSENMQFAIVDDFPASSLFADD 179


>gi|55669507|gb|AAV54621.1| homeobox transcription factor KN4 [Picea mariana]
          Length = 438

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 102/125 (81%)

Query: 35  KDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPK 94
           +DG  SS+EE+S  E E  + + R EDR LKD+LLRK+  +  SLK EF KKKKKGKLPK
Sbjct: 301 EDGGGSSEEEFSCGEIEVHEVDPRAEDRELKDQLLRKYSGYFSSLKQEFLKKKKKGKLPK 360

Query: 95  ESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAV 154
           E+RQ LL+WWN HYKWPYP+E DK+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F V
Sbjct: 361 EARQKLLEWWNVHYKWPYPSETDKVSLAESTGLDQKQINNWFINQRKRHWKPSEDMQFVV 420

Query: 155 MDNLS 159
           MD+L+
Sbjct: 421 MDSLN 425


>gi|449435396|ref|XP_004135481.1| PREDICTED: homeobox protein knotted-1-like 6-like [Cucumis sativus]
          Length = 316

 Score =  168 bits (425), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 95/142 (66%), Positives = 108/142 (76%), Gaps = 3/142 (2%)

Query: 7   PFAAWLSFFFEFIINPSEGCTG-LKFSNTKDGAASSDEEYSGAETEAQDAEA--RDEDRH 63
           PF    +F  +  +  S  C G    S + DGA SSDEE SG E E  +AEA  + E+R 
Sbjct: 161 PFDEATTFLNKIELQLSNLCNGAFSRSLSDDGAVSSDEELSGGEMEVVEAEAQTKGENRD 220

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LKDKLLR+FGSHI +LKLEFSKKKKKGKLPKE+RQTL +WWN HYKWPYPTEADK+ LAE
Sbjct: 221 LKDKLLRRFGSHISTLKLEFSKKKKKGKLPKEARQTLFEWWNVHYKWPYPTEADKVALAE 280

Query: 124 STGLDQKQINNWFINQRKRHWK 145
            TGLDQKQINNWFINQRKRHW+
Sbjct: 281 RTGLDQKQINNWFINQRKRHWQ 302


>gi|110340603|gb|ABG67974.1| STM protein [Kalanchoe daigremontiana]
          Length = 249

 Score =  167 bits (423), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 82/136 (60%), Positives = 99/136 (72%), Gaps = 3/136 (2%)

Query: 31  FSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKG 90
           +  + DG  SSDE+      +  D +A  EDR LK +LLRK+  + GSLK EF K++KKG
Sbjct: 102 YGQSSDGNGSSDEDVD-VHNDLIDPQA--EDRELKGQLLRKYSGYPGSLKQEFMKRRKKG 158

Query: 91  KLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENM 150
           KLPKE+RQ LLDWW  HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M
Sbjct: 159 KLPKEARQQLLDWWTRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDM 218

Query: 151 HFAVMDNLSGPLFTDD 166
            F VM+      + D+
Sbjct: 219 QFVVMEAAHPHYYMDN 234


>gi|285804239|gb|ADC35600.1| class I KNOX homeobox transcription factor STM-like 2 [Prunus
           persica]
          Length = 383

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 100/135 (74%), Gaps = 6/135 (4%)

Query: 28  GLKFSNTKDGAASSDE-EYSGAETEAQDA-----EARDEDRHLKDKLLRKFGSHIGSLKL 81
            L  S++ D A   D  + +G+  E  D      + + EDR LK +LLRK+  ++GSLK 
Sbjct: 223 ALTLSSSSDSAVCGDGLDRNGSSEEEVDVNNNFIDPQAEDRELKGQLLRKYSGYLGSLKQ 282

Query: 82  EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           EF K++KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRK
Sbjct: 283 EFMKERKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRK 342

Query: 142 RHWKPSENMHFAVMD 156
           RHWKPSE+M F V+D
Sbjct: 343 RHWKPSEDMQFVVVD 357


>gi|284468451|gb|ADB90285.1| KNOX [Fragaria vesca]
          Length = 330

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/131 (59%), Positives = 99/131 (75%), Gaps = 4/131 (3%)

Query: 36  DGAASSDEEYSGAETEA---QDAEA-RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           +   SS+EE+S  E EA   QD  A R  DR LKD LL K+  ++G LK +F K +KKGK
Sbjct: 180 EAVGSSEEEFSYGEMEAAEGQDTSAFRACDRELKDMLLHKYSGYLGKLKKDFLKSRKKGK 239

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPK++R  L+DWWN HY+WPYPTE  K+QL+ +TGLDQ+QINNWFINQRKRHWKPSE+M 
Sbjct: 240 LPKDARSALMDWWNTHYRWPYPTEEQKMQLSVATGLDQRQINNWFINQRKRHWKPSEDMK 299

Query: 152 FAVMDNLSGPL 162
           FA+M+ +SG +
Sbjct: 300 FALMEGVSGSI 310


>gi|449450628|ref|XP_004143064.1| PREDICTED: homeobox protein knotted-1-like 6-like [Cucumis sativus]
          Length = 319

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 103/133 (77%)

Query: 25  GCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFS 84
           G      + + + A SSD+E +  E E QD + R ED+ LKD LL +FG HIG+LKLEFS
Sbjct: 176 GAPASTSTPSNEDAMSSDDELNCGERELQDGQMRLEDKGLKDMLLSRFGGHIGTLKLEFS 235

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           KKKKKGKLPKE R+ LL+WW+ HYKWPYPTEADK+ LAE+TGLD KQINNWFINQRKRHW
Sbjct: 236 KKKKKGKLPKEGRKVLLEWWDVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHW 295

Query: 145 KPSENMHFAVMDN 157
           KPSE+M F  MDN
Sbjct: 296 KPSESMQFGNMDN 308


>gi|290796115|gb|ADD64787.1| SHOOT MERISTEMLESS [Brassica napus]
          Length = 382

 Score =  165 bits (418), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 95/125 (76%), Gaps = 5/125 (4%)

Query: 37  GAASSDEEYSGAETEAQD-----AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           G A+ +   +G+  E  D      + + EDR LK +LLRK+  ++GSLK EF KK+KKG+
Sbjct: 231 GEAAIERNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGE 290

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LLDWW+ HYKWPYP+E  KL LAESTGLDQKQINNWFINQRKRHWKPSE+M 
Sbjct: 291 LPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 350

Query: 152 FAVMD 156
           F VMD
Sbjct: 351 FVVMD 355


>gi|258958638|gb|ACV88386.1| class I knox protein [Fragaria x ananassa]
          Length = 330

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 77/131 (58%), Positives = 98/131 (74%), Gaps = 4/131 (3%)

Query: 36  DGAASSDEEYSGAETEA---QDAEA-RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           +    S+EE+S  E EA   QD  A R  DR LKD LL K+  ++G LK +F K +KKGK
Sbjct: 180 EAVGGSEEEFSYGEMEAAEGQDTSAFRACDRELKDMLLHKYSGYLGKLKKDFLKSRKKGK 239

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPK++R  L+DWWN HY+WPYPTE  K+QL+ +TGLDQ+QINNWFINQRKRHWKPSE+M 
Sbjct: 240 LPKDARSALMDWWNTHYRWPYPTEEQKMQLSVATGLDQRQINNWFINQRKRHWKPSEDMK 299

Query: 152 FAVMDNLSGPL 162
           FA+M+ +SG +
Sbjct: 300 FALMEGVSGSI 310


>gi|449500399|ref|XP_004161087.1| PREDICTED: homeobox protein knotted-1-like 6-like [Cucumis sativus]
          Length = 163

 Score =  162 bits (411), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/120 (72%), Positives = 99/120 (82%)

Query: 38  AASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESR 97
           A SSD+E +  E E QD + R ED+ LKD LL +FG HIG+LKLEFSKKKKKGKLPKE R
Sbjct: 33  AMSSDDELNCGERELQDGQMRLEDKGLKDMLLSRFGGHIGTLKLEFSKKKKKGKLPKEGR 92

Query: 98  QTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDN 157
           + LL+WW+ HYKWPYPTEADK+ LAE+TGLD KQINNWFINQRKRHWKPSE+M F  MDN
Sbjct: 93  KVLLEWWDVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQFGNMDN 152


>gi|224123968|ref|XP_002330254.1| predicted protein [Populus trichocarpa]
 gi|222871710|gb|EEF08841.1| predicted protein [Populus trichocarpa]
          Length = 317

 Score =  162 bits (411), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 80/163 (49%), Positives = 108/163 (66%), Gaps = 9/163 (5%)

Query: 7   PFAAWLSFFFEFIINPSEGCTG-----LKFSNTKDGAASSDEEYSGAETEAQDAE----A 57
           PF    +F        S  C G       + +  + A +S+EE S  E EA +++     
Sbjct: 142 PFDEAATFLSSIESQLSSLCKGTLTKMFDYGSADEPAGTSEEELSCGEVEASESQETTGV 201

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
             ++++LK  L+RK+ +H+ +L+ EF K +KKGKLPK++R TLLDWWN HY+WPYPTE +
Sbjct: 202 SSQEQNLKGMLMRKYSAHLSNLRKEFLKNRKKGKLPKDARTTLLDWWNHHYRWPYPTEEE 261

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           K +L+E TGLDQKQINNWFINQRKRHWKPSE+M F  MD +SG
Sbjct: 262 KAKLSEITGLDQKQINNWFINQRKRHWKPSEDMRFPRMDGVSG 304


>gi|218775075|dbj|BAH03543.1| homeobox protein [Triticum aestivum]
          Length = 337

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 80/133 (60%), Positives = 99/133 (74%), Gaps = 3/133 (2%)

Query: 32  SNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           S   +GA SS++E   +  E  D  A  ED+ LK +LLRK+G ++GSL+ EF K++KKGK
Sbjct: 181 STNCEGAGSSEDELDTSCVEEIDPSA--EDKELKHQLLRKYGGYVGSLRQEFCKRRKKGK 238

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LPKE+RQ LL WW  H KWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKP+ E+M
Sbjct: 239 LPKEARQKLLHWWELHSKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPAPEDM 298

Query: 151 HFAVMDNLSGPLF 163
            F+VMD   G  F
Sbjct: 299 PFSVMDGGVGASF 311


>gi|145280672|gb|AAT72917.2| class 1 knox [Dendrobium nobile]
          Length = 287

 Score =  162 bits (410), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/166 (57%), Positives = 116/166 (69%), Gaps = 6/166 (3%)

Query: 7   PFAAWLSFFFEFIINPSEGC-----TGLKFSNTKDGAASSDEEYSGAETEAQDAEARDED 61
           PF    +F     +  S+ C       L    + +   SSDEE SG E EA ++  + E+
Sbjct: 121 PFDEATAFLNTMEVQLSDLCKPTCRPALGPYVSDEAVGSSDEELSGGEGEAPESHLKGEE 180

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           R LK+KLLRK+  ++ SLK EFSKKKKKGKLPKE+RQ L +WW AHYKWPYPTEADK+ L
Sbjct: 181 RDLKEKLLRKYSGYLSSLKQEFSKKKKKGKLPKEARQILFEWWTAHYKWPYPTEADKIAL 240

Query: 122 AESTGLDQKQINNWFINQRKRHWKPS-ENMHFAVMDNLSGPLFTDD 166
           AE+TGLDQKQINNWFINQRKRHWKP+ +NMHF+VMD+ S   F  D
Sbjct: 241 AEATGLDQKQINNWFINQRKRHWKPADQNMHFSVMDSSSTSSFFAD 286


>gi|4589880|dbj|BAA76903.1| homeobox 9 [Nicotiana tabacum]
          Length = 322

 Score =  161 bits (408), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 71/100 (71%), Positives = 85/100 (85%)

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           +  +KDKL+RK+  +I SLK EFSKK KKGKLP+E+RQ LL+WW  HYKWPYPTE +K+ 
Sbjct: 219 ENEIKDKLMRKYSGYISSLKQEFSKKNKKGKLPREARQILLNWWTTHYKWPYPTEGEKIC 278

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           LAESTGLD KQINNWFINQRKRHWKPSENM +AVM+++ G
Sbjct: 279 LAESTGLDPKQINNWFINQRKRHWKPSENMQYAVMESIYG 318


>gi|326524884|dbj|BAK04378.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 337

 Score =  161 bits (408), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 79/133 (59%), Positives = 99/133 (74%), Gaps = 3/133 (2%)

Query: 32  SNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           S   +GA SS+++   +  E  D  A  ED+ LK +LLRK+G ++GSL+ EF K++KKGK
Sbjct: 181 STNCEGAGSSEDDLDASCVEEIDPSA--EDKELKHQLLRKYGGYVGSLRQEFCKRRKKGK 238

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LPKE+RQ LL WW  H KWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKP+ E+M
Sbjct: 239 LPKEARQKLLHWWELHSKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPAPEDM 298

Query: 151 HFAVMDNLSGPLF 163
            F+VMD   G  F
Sbjct: 299 PFSVMDGGVGVSF 311


>gi|82909497|gb|ABB93918.1| homeobox transcription factor KN4 [Picea mariana]
          Length = 135

 Score =  161 bits (407), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 38  AASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESR 97
             SS+EE+S  E E  + + R EDR LKD+LLRK+  +  SLK EF KKKKKGKLPKE+R
Sbjct: 1   GGSSEEEFSCGEIEVHEVDPRAEDRELKDQLLRKYSGYFSSLKQEFLKKKKKGKLPKEAR 60

Query: 98  QTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDN 157
           Q LL+WWN HYKWPYP+E DK+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD+
Sbjct: 61  QKLLEWWNVHYKWPYPSETDKVSLAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDS 120

Query: 158 LS 159
           L+
Sbjct: 121 LN 122


>gi|55740705|gb|AAV64000.1| homeobox transcription factor KN4 [Picea abies]
 gi|55740707|gb|AAV64001.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82908428|gb|ABB93403.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908430|gb|ABB93404.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908432|gb|ABB93405.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908434|gb|ABB93406.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908436|gb|ABB93407.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908438|gb|ABB93408.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908440|gb|ABB93409.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908442|gb|ABB93410.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908444|gb|ABB93411.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908446|gb|ABB93412.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908448|gb|ABB93413.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908450|gb|ABB93414.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908452|gb|ABB93415.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908454|gb|ABB93416.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908456|gb|ABB93417.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908458|gb|ABB93418.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908460|gb|ABB93419.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908462|gb|ABB93420.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908464|gb|ABB93421.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908466|gb|ABB93422.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908468|gb|ABB93423.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908470|gb|ABB93424.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908472|gb|ABB93425.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908474|gb|ABB93426.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908476|gb|ABB93427.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908478|gb|ABB93428.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908480|gb|ABB93429.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908482|gb|ABB93430.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908484|gb|ABB93431.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908486|gb|ABB93432.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908488|gb|ABB93433.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908490|gb|ABB93434.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908492|gb|ABB93435.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908494|gb|ABB93436.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908496|gb|ABB93437.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908498|gb|ABB93438.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908500|gb|ABB93439.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908502|gb|ABB93440.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908504|gb|ABB93441.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908506|gb|ABB93442.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908508|gb|ABB93443.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908510|gb|ABB93444.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908512|gb|ABB93445.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908514|gb|ABB93446.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908516|gb|ABB93447.1| homeobox transcription factor KN4 [Picea abies]
 gi|82908518|gb|ABB93448.1| homeobox transcription factor KN4 [Picea abies]
 gi|82909471|gb|ABB93905.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909473|gb|ABB93906.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909475|gb|ABB93907.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909477|gb|ABB93908.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909479|gb|ABB93909.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909481|gb|ABB93910.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909483|gb|ABB93911.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909485|gb|ABB93912.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909487|gb|ABB93913.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909489|gb|ABB93914.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909491|gb|ABB93915.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909493|gb|ABB93916.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909495|gb|ABB93917.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909499|gb|ABB93919.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909501|gb|ABB93920.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909503|gb|ABB93921.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909505|gb|ABB93922.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909507|gb|ABB93923.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909509|gb|ABB93924.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909511|gb|ABB93925.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909513|gb|ABB93926.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909515|gb|ABB93927.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909517|gb|ABB93928.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909519|gb|ABB93929.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909521|gb|ABB93930.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909523|gb|ABB93931.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909525|gb|ABB93932.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909527|gb|ABB93933.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909529|gb|ABB93934.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909531|gb|ABB93935.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909533|gb|ABB93936.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909535|gb|ABB93937.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909537|gb|ABB93938.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909539|gb|ABB93939.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909541|gb|ABB93940.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909543|gb|ABB93941.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909545|gb|ABB93942.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909547|gb|ABB93943.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909549|gb|ABB93944.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909551|gb|ABB93945.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909553|gb|ABB93946.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909555|gb|ABB93947.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909557|gb|ABB93948.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909559|gb|ABB93949.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909561|gb|ABB93950.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909563|gb|ABB93951.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909565|gb|ABB93952.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909567|gb|ABB93953.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909569|gb|ABB93954.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909571|gb|ABB93955.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82909573|gb|ABB93956.1| homeobox transcription factor KN4 [Picea mariana]
 gi|82912289|gb|ABB95281.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912291|gb|ABB95282.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912293|gb|ABB95283.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912295|gb|ABB95284.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912297|gb|ABB95285.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912299|gb|ABB95286.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912301|gb|ABB95287.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912303|gb|ABB95288.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912305|gb|ABB95289.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912307|gb|ABB95290.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912309|gb|ABB95291.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912311|gb|ABB95292.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912313|gb|ABB95293.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912315|gb|ABB95294.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912317|gb|ABB95295.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912319|gb|ABB95296.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912321|gb|ABB95297.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912323|gb|ABB95298.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912325|gb|ABB95299.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912327|gb|ABB95300.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912329|gb|ABB95301.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912331|gb|ABB95302.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912333|gb|ABB95303.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912335|gb|ABB95304.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912337|gb|ABB95305.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912339|gb|ABB95306.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912341|gb|ABB95307.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912343|gb|ABB95308.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912345|gb|ABB95309.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912347|gb|ABB95310.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912349|gb|ABB95311.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912351|gb|ABB95312.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912353|gb|ABB95313.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912355|gb|ABB95314.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912357|gb|ABB95315.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912359|gb|ABB95316.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912361|gb|ABB95317.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912363|gb|ABB95318.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912365|gb|ABB95319.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912367|gb|ABB95320.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912369|gb|ABB95321.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912371|gb|ABB95322.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912373|gb|ABB95323.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912375|gb|ABB95324.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912377|gb|ABB95325.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912379|gb|ABB95326.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912381|gb|ABB95327.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912383|gb|ABB95328.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912385|gb|ABB95329.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912387|gb|ABB95330.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912389|gb|ABB95331.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912391|gb|ABB95332.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912393|gb|ABB95333.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912395|gb|ABB95334.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912397|gb|ABB95335.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912399|gb|ABB95336.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912401|gb|ABB95337.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912403|gb|ABB95338.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912405|gb|ABB95339.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912407|gb|ABB95340.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912409|gb|ABB95341.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912411|gb|ABB95342.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912413|gb|ABB95343.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912415|gb|ABB95344.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912417|gb|ABB95345.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912419|gb|ABB95346.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912421|gb|ABB95347.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912425|gb|ABB95349.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912427|gb|ABB95350.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912429|gb|ABB95351.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912431|gb|ABB95352.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912433|gb|ABB95353.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912435|gb|ABB95354.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912437|gb|ABB95355.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912439|gb|ABB95356.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912441|gb|ABB95357.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912443|gb|ABB95358.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912445|gb|ABB95359.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912447|gb|ABB95360.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912449|gb|ABB95361.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912451|gb|ABB95362.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912453|gb|ABB95363.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912455|gb|ABB95364.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912457|gb|ABB95365.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912459|gb|ABB95366.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912461|gb|ABB95367.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912463|gb|ABB95368.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912465|gb|ABB95369.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912467|gb|ABB95370.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912469|gb|ABB95371.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912471|gb|ABB95372.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912473|gb|ABB95373.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912475|gb|ABB95374.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912477|gb|ABB95375.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912479|gb|ABB95376.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912481|gb|ABB95377.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912483|gb|ABB95378.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912485|gb|ABB95379.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912487|gb|ABB95380.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912489|gb|ABB95381.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912491|gb|ABB95382.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912493|gb|ABB95383.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912495|gb|ABB95384.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912497|gb|ABB95385.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912499|gb|ABB95386.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912501|gb|ABB95387.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912503|gb|ABB95388.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912505|gb|ABB95389.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912507|gb|ABB95390.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912509|gb|ABB95391.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912513|gb|ABB95393.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912515|gb|ABB95394.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912517|gb|ABB95395.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912519|gb|ABB95396.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912521|gb|ABB95397.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912523|gb|ABB95398.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912525|gb|ABB95399.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912527|gb|ABB95400.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912529|gb|ABB95401.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912531|gb|ABB95402.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912533|gb|ABB95403.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912535|gb|ABB95404.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912537|gb|ABB95405.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912539|gb|ABB95406.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912541|gb|ABB95407.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912543|gb|ABB95408.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912545|gb|ABB95409.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912547|gb|ABB95410.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912549|gb|ABB95411.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912551|gb|ABB95412.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912553|gb|ABB95413.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912555|gb|ABB95414.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912557|gb|ABB95415.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912559|gb|ABB95416.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912561|gb|ABB95417.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912563|gb|ABB95418.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912565|gb|ABB95419.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912567|gb|ABB95420.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912569|gb|ABB95421.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912571|gb|ABB95422.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912573|gb|ABB95423.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912575|gb|ABB95424.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912577|gb|ABB95425.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912579|gb|ABB95426.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912581|gb|ABB95427.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912583|gb|ABB95428.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912585|gb|ABB95429.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912587|gb|ABB95430.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912589|gb|ABB95431.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912591|gb|ABB95432.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912593|gb|ABB95433.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912595|gb|ABB95434.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912597|gb|ABB95435.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912599|gb|ABB95436.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912601|gb|ABB95437.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912603|gb|ABB95438.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912605|gb|ABB95439.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912607|gb|ABB95440.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912609|gb|ABB95441.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912611|gb|ABB95442.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912613|gb|ABB95443.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912615|gb|ABB95444.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912617|gb|ABB95445.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912619|gb|ABB95446.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912621|gb|ABB95447.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912623|gb|ABB95448.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912625|gb|ABB95449.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912627|gb|ABB95450.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912629|gb|ABB95451.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912631|gb|ABB95452.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912633|gb|ABB95453.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912635|gb|ABB95454.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912637|gb|ABB95455.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912639|gb|ABB95456.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912641|gb|ABB95457.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912643|gb|ABB95458.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912645|gb|ABB95459.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912647|gb|ABB95460.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912649|gb|ABB95461.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912651|gb|ABB95462.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912653|gb|ABB95463.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912655|gb|ABB95464.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912657|gb|ABB95465.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912659|gb|ABB95466.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912661|gb|ABB95467.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912663|gb|ABB95468.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912665|gb|ABB95469.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912667|gb|ABB95470.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912669|gb|ABB95471.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912671|gb|ABB95472.1| homeobox transcription factor KN4 [Picea glauca]
          Length = 135

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 38  AASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESR 97
             SS+EE+S  E E  + + R EDR LKD+LLRK+  +  SLK EF KKKKKGKLPKE+R
Sbjct: 1   GGSSEEEFSCGEIEVHEVDPRAEDRELKDQLLRKYSGYFSSLKQEFLKKKKKGKLPKEAR 60

Query: 98  QTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDN 157
           Q LL+WWN HYKWPYP+E DK+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD+
Sbjct: 61  QKLLEWWNVHYKWPYPSETDKVSLAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDS 120

Query: 158 LS 159
           L+
Sbjct: 121 LN 122


>gi|55740701|gb|AAV63998.1| homeobox transcription factor KN4 [Pinus taeda]
          Length = 135

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 38  AASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESR 97
             SS+EE+S  E E  + + R EDR LKD+LLRK+  +  SLK EF KKKKKGKLPKE+R
Sbjct: 1   GGSSEEEFSCGEIEVHEVDPRAEDRELKDQLLRKYSGYFSSLKQEFLKKKKKGKLPKEAR 60

Query: 98  QTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDN 157
           Q LL+WWN HYKWPYP+E DK+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD+
Sbjct: 61  QKLLEWWNVHYKWPYPSETDKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDS 120

Query: 158 LS 159
           L+
Sbjct: 121 LN 122


>gi|371767710|gb|AEX56210.1| knotted-like 4 protein, partial [Dactylorhiza viridis]
          Length = 185

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/173 (54%), Positives = 115/173 (66%), Gaps = 10/173 (5%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSN--------TKDGAASSDEEYSGAETEAQDA 55
           L  PF    +F     I  S+ C     S         + + A SS+EE SG E E  ++
Sbjct: 13  LAQPFDEATAFLNTMEIRLSDLCKPAAASGPPSLAPFISDEAAGSSEEELSGGEVEVPES 72

Query: 56  EARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK-LPKESRQTLLDWWNAHYKWPYPT 114
            ++DE+R LK+KLLRK+  ++ SLK EFSKKKKK   LP+E+RQ LL WW AHYKWPYPT
Sbjct: 73  HSKDEERDLKEKLLRKYSGYLSSLKKEFSKKKKKKGKLPREARQVLLGWWTAHYKWPYPT 132

Query: 115 EADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG-PLFTDD 166
           EADK+ LAE+T LDQKQINNW INQRKRHWKP+ENM FA++D  S   LF DD
Sbjct: 133 EADKISLAETTRLDQKQINNWSINQRKRHWKPAENMQFAIVDGFSASSLFADD 185


>gi|449526764|ref|XP_004170383.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
          Length = 369

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/143 (60%), Positives = 105/143 (73%), Gaps = 7/143 (4%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           I N  + C G+       G++  ++E SG ETE  + + R EDR LK+ LLRK+  ++ S
Sbjct: 214 IFNSDDKCDGM-------GSSEEEQENSGGETELPEIDPRAEDRELKNHLLRKYSGYLSS 266

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK E SKKKKKGKLPKE+RQ LL+WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFIN
Sbjct: 267 LKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFIN 326

Query: 139 QRKRHWKPSENMHFAVMDNLSGP 161
           QRKRHWKPSE+M F VMD L  P
Sbjct: 327 QRKRHWKPSEDMQFMVMDGLHPP 349


>gi|449447321|ref|XP_004141417.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
          Length = 335

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/143 (60%), Positives = 105/143 (73%), Gaps = 7/143 (4%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           I N  + C G+       G++  ++E SG ETE  + + R EDR LK+ LLRK+  ++ S
Sbjct: 171 IFNSDDKCDGM-------GSSEEEQENSGGETELPEIDPRAEDRELKNHLLRKYSGYLSS 223

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK E SKKKKKGKLPKE+RQ LL+WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFIN
Sbjct: 224 LKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFIN 283

Query: 139 QRKRHWKPSENMHFAVMDNLSGP 161
           QRKRHWKPSE+M F VMD L  P
Sbjct: 284 QRKRHWKPSEDMQFMVMDGLHPP 306


>gi|82912423|gb|ABB95348.1| homeobox transcription factor KN4 [Picea glauca]
 gi|82912511|gb|ABB95392.1| homeobox transcription factor KN4 [Picea glauca]
          Length = 135

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 84/119 (70%), Positives = 98/119 (82%)

Query: 41  SDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTL 100
           S+EE+S  E E  + + R EDR LKD+LLRK+  +  SLK EF KKKKKGKLPKE+RQ L
Sbjct: 4   SEEEFSCGEIEVHEVDPRAEDRELKDQLLRKYSGYFSSLKQEFLKKKKKGKLPKEARQKL 63

Query: 101 LDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           L+WWN HYKWPYP+E DK+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD+L+
Sbjct: 64  LEWWNVHYKWPYPSETDKVSLAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDSLN 122


>gi|85543290|gb|ABC71525.1| KNOTTED1 homeodomain protein [Sorghum bicolor]
          Length = 348

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 73/121 (60%), Positives = 89/121 (73%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +    D+ LK  LL+K+  ++ SLK E SKK KKGKLP+E+
Sbjct: 211 GSSEEDQEGSGGETELPEVDVHGVDQELKHHLLKKYSGYLSSLKQELSKKMKKGKLPREA 270

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ  L WW+ HYKWPYP+E  K+ LAESTGLD KQINNWFINQRKRHWKPSE MH  +MD
Sbjct: 271 RQQHLSWWDLHYKWPYPSETQKVALAESTGLDLKQINNWFINQRKRHWKPSEEMHHLMMD 330

Query: 157 N 157
            
Sbjct: 331 G 331


>gi|55276122|gb|AAV49802.1| homeobox transcription factor KN3 [Populus trichocarpa x Populus
           deltoides]
          Length = 368

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/161 (55%), Positives = 110/161 (68%), Gaps = 6/161 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-LKFSNTKD-----GAASSDEEYSGAETEAQDAEA 57
           L  P    + F        +  C G L+  N+ D     G++  D++ SG ETE  + + 
Sbjct: 185 LTRPIQEAMDFMRRIETQLNMICHGPLRIFNSDDKSEGVGSSEDDQDNSGGETELPEIDP 244

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R EDR LK+ LLRK+  ++GSLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+E +
Sbjct: 245 RAEDRELKNHLLRKYSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSETE 304

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
           K+ LAE+TGLDQKQINNWFINQRKRHWKPSE+M F VMD L
Sbjct: 305 KVALAETTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL 345


>gi|6016215|sp|O04134.1|KNAP1_MALDO RecName: Full=Homeobox protein knotted-1-like 1; AltName:
           Full=KNAP1
 gi|1946218|emb|CAA96510.1| kn1-like protein [Malus x domestica]
          Length = 398

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/141 (62%), Positives = 106/141 (75%), Gaps = 8/141 (5%)

Query: 19  IINPSEG-CTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIG 77
           I +PSE  C G+       G++  ++E SG ETE  + + R EDR LK+ LLRK+  ++ 
Sbjct: 242 IFSPSEDKCEGI-------GSSEDEQENSGGETEVPEIDPRAEDRELKNHLLRKYSGYLS 294

Query: 78  SLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFI 137
           SLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFI
Sbjct: 295 SLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFI 354

Query: 138 NQRKRHWKPSENMHFAVMDNL 158
           NQRKRHWKPSE+M F VMD L
Sbjct: 355 NQRKRHWKPSEDMQFMVMDGL 375


>gi|302398825|gb|ADL36707.1| HD domain class transcription factor [Malus x domestica]
          Length = 398

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/141 (62%), Positives = 106/141 (75%), Gaps = 8/141 (5%)

Query: 19  IINPSEG-CTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIG 77
           I +PSE  C G+       G++  ++E SG ETE  + + R EDR LK+ LLRK+  ++ 
Sbjct: 242 IFSPSEDKCEGI-------GSSEDEQENSGGETEVPEIDPRAEDRELKNHLLRKYSGYLS 294

Query: 78  SLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFI 137
           SLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFI
Sbjct: 295 SLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFI 354

Query: 138 NQRKRHWKPSENMHFAVMDNL 158
           NQRKRHWKPSE+M F VMD L
Sbjct: 355 NQRKRHWKPSEDMQFMVMDGL 375


>gi|224063413|ref|XP_002301134.1| predicted protein [Populus trichocarpa]
 gi|222842860|gb|EEE80407.1| predicted protein [Populus trichocarpa]
 gi|225626279|gb|ACN97189.1| KNOX transcription factor [Populus trichocarpa]
          Length = 368

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/161 (55%), Positives = 110/161 (68%), Gaps = 6/161 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-LKFSNTKD-----GAASSDEEYSGAETEAQDAEA 57
           L  P    + F        +  C G L+  N+ D     G++  D++ SG ETE  + + 
Sbjct: 185 LTRPIQEAMDFMRRIETQLNMICHGPLRIFNSDDKSEGVGSSEDDQDNSGGETELPEIDP 244

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R EDR LK+ LLRK+  ++GSLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+E +
Sbjct: 245 RAEDRELKNHLLRKYSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSETE 304

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
           K+ LAE+TGLDQKQINNWFINQRKRHWKPSE+M F VMD L
Sbjct: 305 KVALAETTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL 345


>gi|329757147|gb|AEC04753.1| knotted-like homeobox KNOX4 [Fragaria vesca]
          Length = 348

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 83/127 (65%), Positives = 101/127 (79%), Gaps = 2/127 (1%)

Query: 37  GAASSDEEYSGAETEAQDA--EARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPK 94
           G +S  E+ SG E + QD+  + R+ +  LKDKLLRK+  +I +LK EFS+KKKKGKLPK
Sbjct: 222 GNSSDYEDMSGGEIDVQDSDHQQRNVNHELKDKLLRKYSGYISTLKQEFSQKKKKGKLPK 281

Query: 95  ESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAV 154
           +++Q L DWWN HYKWPYPTE DK+ LA+ TGLDQKQINNWFINQRKRHWKPSENM FAV
Sbjct: 282 DAKQILADWWNLHYKWPYPTEVDKMTLAQVTGLDQKQINNWFINQRKRHWKPSENMQFAV 341

Query: 155 MDNLSGP 161
           M++L  P
Sbjct: 342 MESLYDP 348


>gi|429326570|gb|AFZ78625.1| knotted-like protein [Populus tomentosa]
          Length = 368

 Score =  158 bits (400), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/161 (55%), Positives = 110/161 (68%), Gaps = 6/161 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-LKFSNTKD-----GAASSDEEYSGAETEAQDAEA 57
           L  P    + F        +  C G L+  N+ D     G++  D++ SG ETE  + + 
Sbjct: 185 LTRPIQEAMDFMRRIETQLNMICHGPLRIFNSDDKSEGVGSSEDDQDNSGGETELPEIDP 244

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R EDR LK+ LLRK+  ++GSLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+E +
Sbjct: 245 RAEDRELKNHLLRKYSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSETE 304

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
           K+ LAE+TGLDQKQINNWFINQRKRHWKPSE+M F VMD L
Sbjct: 305 KVALAETTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL 345


>gi|56236458|gb|AAV84585.1| knotted-like homeobox protein [Populus tomentosa]
          Length = 368

 Score =  158 bits (399), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/161 (55%), Positives = 110/161 (68%), Gaps = 6/161 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-LKFSNTKD-----GAASSDEEYSGAETEAQDAEA 57
           L  P    + F        +  C G L+  N+ D     G++  D++ SG ETE  + + 
Sbjct: 185 LTRPIQEAMDFMRRIETQLNMICHGPLRIFNSDDKSEGVGSSEDDQDNSGGETELPEIDP 244

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R EDR LK+ LLRK+  ++GSLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+E +
Sbjct: 245 RAEDRELKNHLLRKYSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSETE 304

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
           K+ LAE+TGLDQKQINNWFINQRKRHWKPSE+M F VMD L
Sbjct: 305 KVALAETTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL 345


>gi|350535222|ref|NP_001233927.1| knotted 3 protein [Solanum lycopersicum]
 gi|4098242|gb|AAD00252.1| knotted 3 protein [Solanum lycopersicum]
          Length = 320

 Score =  158 bits (399), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 85/116 (73%), Positives = 94/116 (81%)

Query: 51  EAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKW 110
           +A  +  R ED  LKD+LLRKFGSH+ SLKLEFSKKKKKGKLPKE+R+ LL WW  H++W
Sbjct: 203 DASSSMRRSEDNELKDRLLRKFGSHLSSLKLEFSKKKKKGKLPKEAREMLLAWWYDHFRW 262

Query: 111 PYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           PY TEADK  LAESTGLD KQINNWFINQRKRHWKPSENM  AVMDNLS   F+ D
Sbjct: 263 PYSTEADKNSLAESTGLDPKQINNWFINQRKRHWKPSENMQLAVMDNLSAQFFSSD 318


>gi|356504010|ref|XP_003520792.1| PREDICTED: homeobox protein knotted-1-like 1-like [Glycine max]
          Length = 307

 Score =  157 bits (398), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 75/139 (53%), Positives = 98/139 (70%), Gaps = 7/139 (5%)

Query: 32  SNTKDGAAS--SDEEYSGAETEA-----QDAEARDEDRHLKDKLLRKFGSHIGSLKLEFS 84
           +N  D  AS  S+EE S  E EA       +     D+ LK+ LLRK+  H   L+ EF 
Sbjct: 168 NNRSDEVASGASEEELSCGEMEAFEDHVSSSVTCPSDQRLKEMLLRKYSGHFSGLRKEFL 227

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           K++KKGKLPK++R  L+DWWN H++WPYPTE +K++L+E TGLDQKQINNWFINQRKRHW
Sbjct: 228 KRRKKGKLPKDARIALMDWWNTHHRWPYPTEEEKVKLSEITGLDQKQINNWFINQRKRHW 287

Query: 145 KPSENMHFAVMDNLSGPLF 163
           KP+++M  AVMD + GP+ 
Sbjct: 288 KPTDDMRSAVMDGIRGPML 306


>gi|169160088|gb|ACA49545.1| class 1 KNOX protein, partial [Corytoplectus speciosus]
          Length = 245

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/140 (61%), Positives = 103/140 (73%), Gaps = 7/140 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           I    E C G+       G++  D++ SG ETE  D + R EDR LK+ LLRK+  ++ S
Sbjct: 90  IFTSEEKCEGV-------GSSEEDQDNSGGETELPDIDPRAEDRELKNHLLRKYSGYLSS 142

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK E SKKKKKGKLPK++RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFIN
Sbjct: 143 LKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFIN 202

Query: 139 QRKRHWKPSENMHFAVMDNL 158
           QRKRHWKPSE+M F VMD L
Sbjct: 203 QRKRHWKPSEDMQFMVMDGL 222


>gi|55669505|gb|AAV54620.1| homeobox transcription factor KN3 [Pinus taeda]
          Length = 470

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 99/123 (80%), Gaps = 1/123 (0%)

Query: 36  DGAASSDEE-YSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPK 94
           DGAASS+EE  SG E E  + +   EDR LKD+LLRK+  ++ SLK EF KKKKKGKLPK
Sbjct: 323 DGAASSEEEDGSGGEVEFHEVDPHAEDRELKDQLLRKYSGYLSSLKQEFLKKKKKGKLPK 382

Query: 95  ESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAV 154
           E+RQ LLDWW  +YKWPYP+E+ K+ LAESTGLDQKQINNWFINQRKRHWKPSE M F V
Sbjct: 383 EARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQKQINNWFINQRKRHWKPSEEMQFVV 442

Query: 155 MDN 157
           MD+
Sbjct: 443 MDS 445


>gi|302398857|gb|ADL36723.1| HD domain class transcription factor [Malus x domestica]
          Length = 397

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/141 (61%), Positives = 106/141 (75%), Gaps = 8/141 (5%)

Query: 19  IINPSEG-CTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIG 77
           I +PSE  C G+       G++  ++E SG ETE  + + R EDR LK+ LLRK+  ++ 
Sbjct: 241 IFSPSEDKCEGI-------GSSEEEQENSGGETEVPEIDPRAEDRELKNHLLRKYSGYLS 293

Query: 78  SLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFI 137
           SLK E SKKKKKGKLPK++RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFI
Sbjct: 294 SLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFI 353

Query: 138 NQRKRHWKPSENMHFAVMDNL 158
           NQRKRHWKPSE+M F VMD L
Sbjct: 354 NQRKRHWKPSEDMQFMVMDGL 374


>gi|26023937|gb|AAN77690.1|AF483277_1 KNOTTED1-like homeodomain protein 2, partial [Picea abies]
          Length = 383

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 99/123 (80%), Gaps = 1/123 (0%)

Query: 36  DGAASSDEE-YSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPK 94
           DGAASS+EE  SG E E  + +   EDR LKD+LLRK+  ++ SLK EF KKKKKGKLPK
Sbjct: 236 DGAASSEEEDGSGGEVEFHEVDPHAEDRELKDQLLRKYSGYLSSLKQEFLKKKKKGKLPK 295

Query: 95  ESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAV 154
           E+RQ LLDWW  +YKWPYP+E+ K+ LAESTGLDQKQINNWFINQRKRHWKPSE M F V
Sbjct: 296 EARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQKQINNWFINQRKRHWKPSEEMQFVV 355

Query: 155 MDN 157
           MD+
Sbjct: 356 MDS 358


>gi|40218227|gb|AAR83015.1| putative Kn1-like homeobox protein [Populus tremula x Populus alba]
          Length = 186

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/161 (55%), Positives = 110/161 (68%), Gaps = 6/161 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-LKFSNTKD-----GAASSDEEYSGAETEAQDAEA 57
           L  P    + F        +  C G L+  N+ D     G++  D++ SG ETE  + + 
Sbjct: 22  LTRPIQEAMDFMRRIETQLNMICHGPLRIFNSDDKSEGVGSSEDDQDNSGGETELPEIDP 81

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R EDR LK+ LLRK+  ++GSLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+E +
Sbjct: 82  RAEDRELKNHLLRKYSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSETE 141

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
           K+ LAE+TGLDQKQINNWFINQRKRHWKPSE+M F VMD L
Sbjct: 142 KVALAETTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL 182


>gi|6016217|sp|O04135.1|KNAP2_MALDO RecName: Full=Homeobox protein knotted-1-like 2; AltName:
           Full=KNAP2
 gi|1946220|emb|CAA96511.1| kn1-like protein [Malus x domestica]
          Length = 397

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/141 (61%), Positives = 106/141 (75%), Gaps = 8/141 (5%)

Query: 19  IINPSEG-CTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIG 77
           I +PSE  C G+       G++  ++E SG ETE  + + R EDR LK+ LLRK+  ++ 
Sbjct: 241 IFSPSEDKCEGI-------GSSEEEQENSGGETEVPEIDPRAEDRELKNHLLRKYSGYLS 293

Query: 78  SLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFI 137
           SLK E SKKKKKGKLPK++RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFI
Sbjct: 294 SLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFI 353

Query: 138 NQRKRHWKPSENMHFAVMDNL 158
           NQRKRHWKPSE+M F VMD L
Sbjct: 354 NQRKRHWKPSEDMQFMVMDGL 374


>gi|297813269|ref|XP_002874518.1| hypothetical protein ARALYDRAFT_489727 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320355|gb|EFH50777.1| hypothetical protein ARALYDRAFT_489727 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 395

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/149 (59%), Positives = 106/149 (71%), Gaps = 11/149 (7%)

Query: 16  FEFIINPSEGCTGLKFSNTKDGAASSDEEY---SGAETEAQDAEARDEDRHLKDKLLRKF 72
              + NP++G          +G  SSDEE    SG ETE  + + R EDR LK+ LL+K+
Sbjct: 234 IHILNNPADG--------KSEGMGSSDEEQENTSGGETELPEIDPRAEDRELKNHLLKKY 285

Query: 73  GSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
             ++ SLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQI
Sbjct: 286 SGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQI 345

Query: 133 NNWFINQRKRHWKPSENMHFAVMDNLSGP 161
           NNWFINQRKRHWKPSE+M F VMD L  P
Sbjct: 346 NNWFINQRKRHWKPSEDMQFMVMDGLQHP 374


>gi|85816364|gb|ABC84491.1| knotted-like transcription factor [Prunus persica]
 gi|88853988|gb|ABD52723.1| KNOPE1 [Prunus persica]
          Length = 389

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/141 (61%), Positives = 106/141 (75%), Gaps = 8/141 (5%)

Query: 19  IINPSEG-CTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIG 77
           I +PSE  C GL       G++  ++E SG ETE  + + R EDR LK+ LL+K+  ++ 
Sbjct: 233 IFSPSEDKCEGL-------GSSEEEQENSGGETEVPEIDPRAEDRELKNHLLKKYSGYLS 285

Query: 78  SLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFI 137
           SLK E SKKKKKGKLPK++RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFI
Sbjct: 286 SLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFI 345

Query: 138 NQRKRHWKPSENMHFAVMDNL 158
           NQRKRHWKPSE+M F VMD L
Sbjct: 346 NQRKRHWKPSEDMQFMVMDGL 366


>gi|357113910|ref|XP_003558744.1| PREDICTED: homeobox protein knotted-1-like 8-like [Brachypodium
           distachyon]
          Length = 345

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/121 (61%), Positives = 95/121 (78%), Gaps = 3/121 (2%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           +GA SS+++   +  E  D  A  EDR LK +LLRK+G ++GSL+ EF K++KKGKLPKE
Sbjct: 192 EGAGSSEDDLDTSCAEEIDPSA--EDRELKHQLLRKYGGYVGSLRQEFCKRRKKGKLPKE 249

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP-SENMHFAV 154
           +RQ LL WW  H KWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKP +E+M F++
Sbjct: 250 ARQKLLQWWELHCKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPAAEDMPFSM 309

Query: 155 M 155
           M
Sbjct: 310 M 310


>gi|225458942|ref|XP_002285521.1| PREDICTED: homeobox protein knotted-1-like 2 [Vitis vinifera]
          Length = 370

 Score =  155 bits (393), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 84/140 (60%), Positives = 103/140 (73%), Gaps = 7/140 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           I    E C G+       G++  D++ SG ETE  + + R EDR LK+ LLRK+  ++ S
Sbjct: 215 IFTSDEKCEGV-------GSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLSS 267

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK E SKKKKKGKLPK++RQ LL+WW  HYKWPYP+E +K+ LAE+TGLDQKQINNWFIN
Sbjct: 268 LKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSETEKVALAETTGLDQKQINNWFIN 327

Query: 139 QRKRHWKPSENMHFAVMDNL 158
           QRKRHWKPSE+M F VMD L
Sbjct: 328 QRKRHWKPSEDMQFMVMDGL 347


>gi|302142140|emb|CBI19343.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  155 bits (393), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 84/140 (60%), Positives = 103/140 (73%), Gaps = 7/140 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           I    E C G+       G++  D++ SG ETE  + + R EDR LK+ LLRK+  ++ S
Sbjct: 186 IFTSDEKCEGV-------GSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLSS 238

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK E SKKKKKGKLPK++RQ LL+WW  HYKWPYP+E +K+ LAE+TGLDQKQINNWFIN
Sbjct: 239 LKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSETEKVALAETTGLDQKQINNWFIN 298

Query: 139 QRKRHWKPSENMHFAVMDNL 158
           QRKRHWKPSE+M F VMD L
Sbjct: 299 QRKRHWKPSEDMQFMVMDGL 318


>gi|160420034|dbj|BAF93480.1| class-I knotted1-like homeobox protein IBKN3 [Ipomoea batatas]
          Length = 266

 Score =  155 bits (393), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 84/140 (60%), Positives = 103/140 (73%), Gaps = 7/140 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           +    + C G+       G++  D++ SG ETE  + + R EDR LK+ LLRK+  ++ S
Sbjct: 111 VFTSDDKCEGV-------GSSEDDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLSS 163

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK E SKKKKKGKLPKE+RQ LL+WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFIN
Sbjct: 164 LKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFIN 223

Query: 139 QRKRHWKPSENMHFAVMDNL 158
           QRKRHWKPSE+M F VMD L
Sbjct: 224 QRKRHWKPSEDMQFMVMDGL 243


>gi|255537924|ref|XP_002510027.1| homeobox protein knotted-1, putative [Ricinus communis]
 gi|223550728|gb|EEF52214.1| homeobox protein knotted-1, putative [Ricinus communis]
          Length = 259

 Score =  155 bits (393), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/161 (55%), Positives = 109/161 (67%), Gaps = 6/161 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-LKFSNTKD-----GAASSDEEYSGAETEAQDAEA 57
           L  P    + F        +  C G L+  N+ +     G++  D++ SG ETE  + + 
Sbjct: 76  LTRPIQEAMDFMRRIETQLNMICNGPLRIFNSDEKSEGVGSSEEDQDNSGGETELPEIDP 135

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R EDR LK+ LLRK+  ++ SLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+E +
Sbjct: 136 RAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSETE 195

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
           K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD L
Sbjct: 196 KVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL 236


>gi|356577702|ref|XP_003556963.1| PREDICTED: homeobox protein knotted-1-like 2-like, partial [Glycine
           max]
          Length = 323

 Score =  155 bits (393), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/132 (63%), Positives = 103/132 (78%), Gaps = 3/132 (2%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D++ SG ETE  + + R EDR LK+ LLRK+  ++ SLK E SKKKKKGKLPK++
Sbjct: 179 GSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDA 238

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL+WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 239 RQKLLNWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMD 298

Query: 157 NL---SGPLFTD 165
            L   S  L+ D
Sbjct: 299 GLHPQSATLYMD 310


>gi|15236418|ref|NP_192555.1| homeobox protein knotted-1-like 1 [Arabidopsis thaliana]
 gi|1170676|sp|P46639.1|KNAT1_ARATH RecName: Full=Homeobox protein knotted-1-like 1; AltName:
           Full=Protein BREVIPEDICELLUS; AltName: Full=Protein
           KNAT1
 gi|4689449|gb|AAD27897.1|AC006267_2 KNAT1 homeobox-like protein [Arabidopsis thaliana]
 gi|606950|gb|AAA67881.1| knotted-like homeobox protein [Arabidopsis thaliana]
 gi|7267455|emb|CAB81151.1| KNAT1 homeobox-like protein [Arabidopsis thaliana]
 gi|19424027|gb|AAL87309.1| putative KNAT1 homeobox protein [Arabidopsis thaliana]
 gi|21280867|gb|AAM45030.1| putative KNAT1 homeobox protein [Arabidopsis thaliana]
 gi|332657197|gb|AEE82597.1| homeobox protein knotted-1-like 1 [Arabidopsis thaliana]
          Length = 398

 Score =  155 bits (392), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 86/129 (66%), Positives = 99/129 (76%), Gaps = 3/129 (2%)

Query: 36  DGAASSDEEY---SGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           D   SSDEE    SG ETE  + + R EDR LK+ LL+K+  ++ SLK E SKKKKKGKL
Sbjct: 249 DNMGSSDEEQENNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKL 308

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHF 152
           PKE+RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F
Sbjct: 309 PKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 368

Query: 153 AVMDNLSGP 161
            VMD L  P
Sbjct: 369 MVMDGLQHP 377


>gi|19908861|gb|AAM03027.1|AF482995_1 homeodomain protein KNAT1/BP [Arabidopsis thaliana]
          Length = 400

 Score =  155 bits (392), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 86/129 (66%), Positives = 99/129 (76%), Gaps = 3/129 (2%)

Query: 36  DGAASSDEEY---SGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           D   SSDEE    SG ETE  + + R EDR LK+ LL+K+  ++ SLK E SKKKKKGKL
Sbjct: 251 DNMGSSDEEQENNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKL 310

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHF 152
           PKE+RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F
Sbjct: 311 PKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 370

Query: 153 AVMDNLSGP 161
            VMD L  P
Sbjct: 371 MVMDGLQHP 379


>gi|19908859|gb|AAM03026.1|AF482994_1 homeodomain protein KNAT1/BP [Arabidopsis thaliana]
          Length = 400

 Score =  155 bits (392), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 86/129 (66%), Positives = 99/129 (76%), Gaps = 3/129 (2%)

Query: 36  DGAASSDEEY---SGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           D   SSDEE    SG ETE  + + R EDR LK+ LL+K+  ++ SLK E SKKKKKGKL
Sbjct: 251 DNMGSSDEEQENNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKL 310

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHF 152
           PKE+RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F
Sbjct: 311 PKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 370

Query: 153 AVMDNLSGP 161
            VMD L  P
Sbjct: 371 MVMDGLQHP 379


>gi|110294442|gb|ABG66654.1| BREVIPEDICELLUS [Cardamine hirsuta]
          Length = 396

 Score =  155 bits (391), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 93/163 (57%), Positives = 108/163 (66%), Gaps = 8/163 (4%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-LKFSNTKDG----AASSDEEY---SGAETEAQDA 55
           L  P    + F        S  C G +   N  DG      SSDEE    SG ETE  + 
Sbjct: 210 LTRPIQEAMEFIRRIESQLSMLCQGPIHILNNPDGKSEGMVSSDEEQENNSGGETELAEI 269

Query: 56  EARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTE 115
           + R EDR LK+ LL+K+  ++ SLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+E
Sbjct: 270 DPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSE 329

Query: 116 ADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
           ++K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD L
Sbjct: 330 SEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL 372


>gi|224122928|ref|XP_002318951.1| predicted protein [Populus trichocarpa]
 gi|222857327|gb|EEE94874.1| predicted protein [Populus trichocarpa]
          Length = 258

 Score =  155 bits (391), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 78/163 (47%), Positives = 105/163 (64%), Gaps = 9/163 (5%)

Query: 7   PFAAWLSFFFEFIINPSEGCTG-----LKFSNTKDGAASSDEEYSGAETEAQDAEA---- 57
           PF    +F        S  C G       + +  + A +S+EE S  E EA +       
Sbjct: 88  PFDEATTFLSSIESQLSSLCKGTLTKIFDYGSADEPAWTSEEELSCGEVEASEIPGSLGF 147

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
              D++LK  LL K+  H+ SL+ EF K++KKGKLPK+++  LLDWWN HY+WPYPTE +
Sbjct: 148 HSSDQNLKGVLLSKYSGHLSSLRKEFLKQRKKGKLPKDAKTLLLDWWNHHYRWPYPTEEE 207

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           K +L+E TGLDQKQINNWFINQRKRHWKPS++M FA+M+++ G
Sbjct: 208 KAKLSEITGLDQKQINNWFINQRKRHWKPSKDMRFALMESVGG 250


>gi|350537947|ref|NP_001233807.1| homeotic protein knotted-1 [Solanum lycopersicum]
 gi|3023974|sp|Q41330.1|KN1_SOLLC RecName: Full=Homeotic protein knotted-1; Short=TKN1
 gi|1256575|gb|AAC49251.1| Knotted 1 (TKn1) [Solanum lycopersicum]
 gi|1588258|prf||2208273A Knotted-1 gene
          Length = 355

 Score =  155 bits (391), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 84/140 (60%), Positives = 104/140 (74%), Gaps = 7/140 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           I N  + C G+       G++  D++ SG ETE  + + R EDR LK+ LLRK+  ++ S
Sbjct: 199 IFNSEDKCEGV-------GSSEEDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLSS 251

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK E SKKKKKGKLPK++RQ L+ WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFIN
Sbjct: 252 LKQELSKKKKKGKLPKDARQKLITWWELHYKWPYPSESEKVALAESTGLDQKQINNWFIN 311

Query: 139 QRKRHWKPSENMHFAVMDNL 158
           QRKRHWKPSE+M F VMD L
Sbjct: 312 QRKRHWKPSEDMQFMVMDGL 331


>gi|388556558|ref|NP_001253999.1| homeobox protein knotted-1-like 2-like [Glycine max]
 gi|302135385|gb|ADK94035.1| KNOX-like DNA-binding protein [Glycine max]
          Length = 385

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/141 (63%), Positives = 109/141 (77%), Gaps = 6/141 (4%)

Query: 31  FSNTK-DGAASS--DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKK 87
           FS+ K +GA SS  D++ SG ETE  + + R EDR LK+ LL+K+  ++ SLK E SKKK
Sbjct: 232 FSDDKCEGAGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKK 291

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           KKGKLPK++RQ LL+WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFINQRKRHWKPS
Sbjct: 292 KKGKLPKDARQKLLNWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPS 351

Query: 148 ENMHFAVMDNL---SGPLFTD 165
           E+M F VMD L   S  L+ D
Sbjct: 352 EDMQFMVMDGLHPQSATLYMD 372


>gi|300676315|gb|ADK26527.1| HERMIT-like protein 1 [Petunia x hybrida]
          Length = 322

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/128 (60%), Positives = 95/128 (74%), Gaps = 5/128 (3%)

Query: 37  GAASSDE-EYSGAETEAQDAEARDEDRH--LKDKLLRKFGSHIGSLKLEF-SKKKKKGKL 92
           GA   +E + +GA+ EA D +  D  R   +KDKL+RK+  +I SLK E  +K  KKGKL
Sbjct: 192 GAEPEEENDITGADGEA-DEKINDMCRESEIKDKLMRKYSGYIRSLKQEVCNKNNKKGKL 250

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHF 152
           PKE+RQ LL+WW  HYKWPYPTE DK+ L ESTGLD KQINNWFINQRKRHWKPSENM +
Sbjct: 251 PKEARQILLNWWTCHYKWPYPTEGDKIYLVESTGLDPKQINNWFINQRKRHWKPSENMQY 310

Query: 153 AVMDNLSG 160
            VM+++ G
Sbjct: 311 MVMEHIHG 318


>gi|33333548|gb|AAQ11890.1| knotted 3 [Nicotiana tabacum]
          Length = 340

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/140 (59%), Positives = 103/140 (73%), Gaps = 7/140 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           I N  + C G+       G++  +++ SG ETE    + R EDR LK+ LLRK+  ++ S
Sbjct: 184 IFNSEDNCEGV-------GSSEEEQDNSGGETEIPQIDPRAEDRELKNHLLRKYSGYLSS 236

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK E SKKKKKGKLPK++RQ LL WW  HYKWPYP+E++K+ LAE+TGLDQKQINNWFIN
Sbjct: 237 LKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAETTGLDQKQINNWFIN 296

Query: 139 QRKRHWKPSENMHFAVMDNL 158
           QRKRHWKPSE+M F VMD L
Sbjct: 297 QRKRHWKPSEDMQFMVMDGL 316


>gi|187606722|emb|CAQ51275.1| putative knotted1-like protein [Helianthus annuus]
          Length = 346

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/146 (58%), Positives = 101/146 (69%), Gaps = 7/146 (4%)

Query: 28  GLKFSNTKDGAASSDEEYSGAETEAQDAEARD-------EDRHLKDKLLRKFGSHIGSLK 80
            + FSN+  G      + +G+  E  D +  +       EDR LK +LLRK+  ++GSLK
Sbjct: 188 AITFSNSDSGCGEGGMDRNGSSEEELDVDMNNGMVDPQAEDRELKGQLLRKYSGYLGSLK 247

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
            EF KK+KKGKLPKE+RQ LLDWW  HYKWPYP+EA KL LAESTGLDQKQINNWFINQR
Sbjct: 248 QEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSEAQKLALAESTGLDQKQINNWFINQR 307

Query: 141 KRHWKPSENMHFAVMDNLSGPLFTDD 166
           KRHWKPSE+M F VMD      F D+
Sbjct: 308 KRHWKPSEDMQFVVMDAAHPHYFIDN 333


>gi|239819336|gb|ACS28250.1| BREVIPEDICELLUS [Brassica oleracea]
          Length = 380

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/145 (61%), Positives = 104/145 (71%), Gaps = 9/145 (6%)

Query: 26  CTG-LKFSNTKDGAA----SSDEEY----SGAETEAQDAEARDEDRHLKDKLLRKFGSHI 76
           C G +   N  DG +    SSDEE     SG E E  + + R EDR LK+ LL+K+  ++
Sbjct: 215 CQGPIHILNNPDGKSEGIESSDEEQDNNNSGGEAELPEIDPRAEDRELKNHLLKKYSGYL 274

Query: 77  GSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWF 136
            SLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWF
Sbjct: 275 SSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWF 334

Query: 137 INQRKRHWKPSENMHFAVMDNLSGP 161
           INQRKRHWKPSE+M F VMD L  P
Sbjct: 335 INQRKRHWKPSEDMQFMVMDGLQHP 359


>gi|239616354|gb|ACR83812.1| brevipedicellus [Brassica napus]
          Length = 358

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/167 (55%), Positives = 109/167 (65%), Gaps = 9/167 (5%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-LKFSNTKDGAA----SSDEEY----SGAETEAQD 54
           L  P    + +        S  C G +   N  DG +    SSDEE     SG E E  +
Sbjct: 171 LTRPIEEAMEYIRRIESQISMLCQGPIHILNNPDGKSEGMESSDEEQDNNNSGGEAELPE 230

Query: 55  AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPT 114
            + R EDR LK+ LL+K+  ++ SLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+
Sbjct: 231 IDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPS 290

Query: 115 EADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGP 161
           E++K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD L  P
Sbjct: 291 ESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHP 337


>gi|378926271|gb|AFC67275.1| KNAT1/BP transcription factor splice variant [Arabidopsis thaliana]
          Length = 214

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/129 (66%), Positives = 99/129 (76%), Gaps = 3/129 (2%)

Query: 36  DGAASSDEEY---SGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           D   SSDEE    SG ETE  + + R EDR LK+ LL+K+  ++ SLK E SKKKKKGKL
Sbjct: 65  DNMGSSDEEQENNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKL 124

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHF 152
           PKE+RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F
Sbjct: 125 PKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 184

Query: 153 AVMDNLSGP 161
            VMD L  P
Sbjct: 185 MVMDGLQHP 193


>gi|20977646|gb|AAM28232.1| knotted-1-like protein 2 [Helianthus annuus]
          Length = 358

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/123 (69%), Positives = 97/123 (78%), Gaps = 3/123 (2%)

Query: 39  ASSDEEY---SGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
            SSDEE    SG ETE  + + R EDR LK+ LLRK+  ++ SLK E SKKKKKGKLPKE
Sbjct: 210 GSSDEEQENTSGGETEVAEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKE 269

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VM
Sbjct: 270 ARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVM 329

Query: 156 DNL 158
           D L
Sbjct: 330 DGL 332


>gi|294460537|gb|ADE75844.1| unknown [Picea sitchensis]
          Length = 169

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/140 (65%), Positives = 104/140 (74%), Gaps = 10/140 (7%)

Query: 36  DGAASSDEE-YSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPK 94
           DGAASS+EE  SG E E  + +   EDR LKD+LLRK+  ++ SLK EF KKKKKGKLPK
Sbjct: 22  DGAASSEEEDGSGGEVEFHEVDPHAEDRELKDQLLRKYSGYLSSLKQEFLKKKKKGKLPK 81

Query: 95  ESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAV 154
           E+RQ LLDWW  +YKWPYP+E+ K+ LAESTGLDQKQINNWFINQRKRHWKPSE M F V
Sbjct: 82  EARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQKQINNWFINQRKRHWKPSEEMQFVV 141

Query: 155 MDN---------LSGPLFTD 165
           MD+         L G L TD
Sbjct: 142 MDSPNPHNAAFFLEGHLRTD 161


>gi|85543298|gb|ABC71529.1| KNOTTED1 homeodomain protein [Chasmanthium latifolium]
          Length = 334

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/122 (61%), Positives = 91/122 (74%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
            G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKG LPKE
Sbjct: 195 SGSSEEDQEGSGGETELPEVDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGTLPKE 254

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LL WW+ HYKWPYP+E  K+ LAESTGL+ KQINNWFINQRKRHWKPSE MH  +M
Sbjct: 255 ARQQLLSWWDLHYKWPYPSETQKVALAESTGLNLKQINNWFINQRKRHWKPSEEMHHLMM 314

Query: 156 DN 157
           D 
Sbjct: 315 DG 316


>gi|358249166|ref|NP_001239748.1| uncharacterized protein LOC100803095 [Glycine max]
 gi|255639822|gb|ACU20204.1| unknown [Glycine max]
          Length = 311

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/131 (56%), Positives = 94/131 (71%), Gaps = 6/131 (4%)

Query: 32  SNTKDGAAS--SDEEYSGAETEAQDAEARD----EDRHLKDKLLRKFGSHIGSLKLEFSK 85
           +N  D  AS  S+EE S  E EA +          D+ LK+ LLRK+  H   L+ EF K
Sbjct: 165 NNRSDEVASGASEEELSCGEMEAFEDNVSSVTCPSDQRLKEMLLRKYSGHFSGLRKEFLK 224

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           ++KKGKLPK++R  L+ WWN H++WPYPTE +K++L+E TGLDQKQINNWFINQRKRHWK
Sbjct: 225 RRKKGKLPKDARMALMGWWNTHHRWPYPTEEEKVKLSEITGLDQKQINNWFINQRKRHWK 284

Query: 146 PSENMHFAVMD 156
           P+E+M FAVMD
Sbjct: 285 PTEDMRFAVMD 295


>gi|329757143|gb|AEC04751.1| knotted-like homeobox KNOX2 [Fragaria vesca]
          Length = 432

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/126 (66%), Positives = 99/126 (78%), Gaps = 3/126 (2%)

Query: 36  DGAASSDEEY---SGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           DG  SS+E+    SG ETE  + + R EDR LK+ LLRK+  ++ SLK E SKKKKKGKL
Sbjct: 283 DGNGSSEEDQDNNSGGETEVAEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKL 342

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHF 152
           PK++RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F
Sbjct: 343 PKDARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 402

Query: 153 AVMDNL 158
            VMD L
Sbjct: 403 MVMDGL 408


>gi|160420032|dbj|BAF93479.1| class-I knotted1-like homeobox protein IBKN2 [Ipomoea batatas]
          Length = 382

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/140 (58%), Positives = 104/140 (74%), Gaps = 7/140 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           I N  + C G+       G++  D++ SG ETE ++ + R +DR LK+ LL+K+  ++ S
Sbjct: 227 IFNSDDKCEGV-------GSSEEDQDNSGGETELREIDPRVQDRELKNHLLKKYSGYLSS 279

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK E SKKKKKGKLPK++RQ LL WW  HYKWPYP+E +K+ LAE+TGLDQKQINNWFIN
Sbjct: 280 LKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSETEKVALAEATGLDQKQINNWFIN 339

Query: 139 QRKRHWKPSENMHFAVMDNL 158
           QRKRHWKPSE+M F VMD L
Sbjct: 340 QRKRHWKPSEDMQFMVMDGL 359


>gi|20977644|gb|AAM28233.1| knotted-1-like protein 3 [Helianthus annuus]
          Length = 189

 Score =  152 bits (385), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/146 (58%), Positives = 101/146 (69%), Gaps = 7/146 (4%)

Query: 28  GLKFSNTKDGAASSDEEYSGAETEAQDAEARD-------EDRHLKDKLLRKFGSHIGSLK 80
            + FSN+  G      + +G+  E  D +  +       EDR LK +LLRK+  ++GSLK
Sbjct: 31  AITFSNSDSGCGEGGMDRNGSSEEELDVDMNNGVVDPQAEDRELKGQLLRKYSGYLGSLK 90

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
            EF KK+KKGKLPKE+RQ LLDWW  HYKWPYP+EA KL LAESTGLDQKQINNWFINQR
Sbjct: 91  QEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSEAQKLALAESTGLDQKQINNWFINQR 150

Query: 141 KRHWKPSENMHFAVMDNLSGPLFTDD 166
           KRHWKPSE+M F VMD      F D+
Sbjct: 151 KRHWKPSEDMQFVVMDAAHPHYFIDN 176


>gi|300676313|gb|ADK26526.1| KNOTTED1-like protein [Petunia x hybrida]
          Length = 357

 Score =  152 bits (383), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 98/122 (80%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D++ SG ETE  + + R EDR LK+ LL+K+  ++ SLK E SKKKKKGKLPK++
Sbjct: 212 GSSEEDQDNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKDA 271

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 272 RQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMD 331

Query: 157 NL 158
            L
Sbjct: 332 GL 333


>gi|4589882|dbj|BAA76904.1| homeobox 20 [Nicotiana tabacum]
          Length = 356

 Score =  152 bits (383), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 99/125 (79%), Gaps = 2/125 (1%)

Query: 36  DGAASSDEEY--SGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLP 93
           +G  SS+EE   SG ETE  + + R EDR LK+ LLRK+  ++ SLK E SKKKKKGKLP
Sbjct: 208 EGVGSSEEEQDNSGGETEIPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKLP 267

Query: 94  KESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFA 153
           K++RQ LL WW  HYKWPYP+E++K+ LAE+TGLDQKQINNWFINQRKRHWKPSE+M F 
Sbjct: 268 KDARQKLLSWWELHYKWPYPSESEKVALAETTGLDQKQINNWFINQRKRHWKPSEDMQFM 327

Query: 154 VMDNL 158
           VMD L
Sbjct: 328 VMDGL 332


>gi|60476414|gb|AAX21346.1| homeobox knotted-1-like protein KNOX2 [Lotus japonicus]
          Length = 243

 Score =  152 bits (383), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 98/122 (80%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D++ SG ETE  + + R EDR LK  LL+K+  ++ SLK E S+KKKKGKLPK++
Sbjct: 98  GSSEEDQDNSGGETELPEIDPRAEDRELKTHLLKKYSGYLSSLKQELSEKKKKGKLPKDA 157

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL+WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 158 RQKLLNWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMD 217

Query: 157 NL 158
            L
Sbjct: 218 GL 219


>gi|147800378|emb|CAN64264.1| hypothetical protein VITISV_033719 [Vitis vinifera]
          Length = 359

 Score =  152 bits (383), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/142 (61%), Positives = 103/142 (72%), Gaps = 7/142 (4%)

Query: 15  FFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGS 74
           F    + PS+   G    +      SS+EE  G +T   D +A  EDR LK +LLRK+  
Sbjct: 200 FKALTVAPSDSVCG----SYAGRVGSSEEEVDGNDT-CIDPQA--EDRELKGQLLRKYSG 252

Query: 75  HIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINN 134
           ++GSLK EF KKKKKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINN
Sbjct: 253 YLGSLKQEFLKKKKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINN 312

Query: 135 WFINQRKRHWKPSENMHFAVMD 156
           WFINQRKRHWKPSE+M F VMD
Sbjct: 313 WFINQRKRHWKPSEDMQFVVMD 334


>gi|359485634|ref|XP_002273805.2| PREDICTED: homeobox protein SBH1-like, partial [Vitis vinifera]
          Length = 358

 Score =  151 bits (382), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/142 (61%), Positives = 103/142 (72%), Gaps = 7/142 (4%)

Query: 15  FFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGS 74
           F    + PS+   G    +      SS+EE  G +T   D +A  EDR LK +LLRK+  
Sbjct: 199 FKALTVAPSDSVCG----SYAGRVGSSEEEVDGNDT-CIDPQA--EDRELKGQLLRKYSG 251

Query: 75  HIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINN 134
           ++GSLK EF KKKKKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINN
Sbjct: 252 YLGSLKQEFLKKKKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINN 311

Query: 135 WFINQRKRHWKPSENMHFAVMD 156
           WFINQRKRHWKPSE+M F VMD
Sbjct: 312 WFINQRKRHWKPSEDMQFVVMD 333


>gi|132424653|gb|ABO33479.1| class I KNOX homeobox transcription factor [Medicago truncatula]
          Length = 288

 Score =  151 bits (382), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/137 (62%), Positives = 104/137 (75%), Gaps = 4/137 (2%)

Query: 33  NTKDGAASSDEEYSGAET-EAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           N   G++  D+E SG ET +  + + R EDR LK+ LL+K+  ++ SLK E SKKKKKGK
Sbjct: 139 NEGVGSSEEDQENSGGETDQLPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGK 198

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LL+WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M 
Sbjct: 199 LPKEARQKLLNWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 258

Query: 152 FAVMDNL---SGPLFTD 165
           F VMD L   S  L+ D
Sbjct: 259 FMVMDGLHPQSAALYMD 275


>gi|33333546|gb|AAQ11889.1| knotted 2 [Nicotiana tabacum]
          Length = 341

 Score =  151 bits (381), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 82/140 (58%), Positives = 103/140 (73%), Gaps = 7/140 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           I N  + C G+       G++  +++ SG ETE  + + R EDR LK+ LLRK+  ++ S
Sbjct: 185 IFNSEDKCEGV-------GSSEEEQDNSGGETEIPEIDPRAEDRELKNHLLRKYSGYLSS 237

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK E SKKKKKGKLPK++RQ LL WW  HYKWPYP+E++K+ LAE+TGLDQKQINNWFIN
Sbjct: 238 LKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAETTGLDQKQINNWFIN 297

Query: 139 QRKRHWKPSENMHFAVMDNL 158
           QRKRHWKPSE+M F VM  L
Sbjct: 298 QRKRHWKPSEDMQFMVMVGL 317


>gi|239819334|gb|ACS28249.1| BREVIPEDICELLUS [Brassica rapa]
          Length = 383

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/167 (54%), Positives = 108/167 (64%), Gaps = 9/167 (5%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-LKFSNTKDGAA----SSDEEY----SGAETEAQD 54
           L  P    + +        S  C G +   N  DG +    SSDEE     SG E E  +
Sbjct: 196 LTRPIEEAMEYIRRIESQISMLCQGPIHILNNPDGKSEGMESSDEEQDNNNSGGEAELPE 255

Query: 55  AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPT 114
            + R EDR LK+ LL+K+  ++ SLK E SKKKKKGKLPKE+RQ LL WW  HYKWPYP+
Sbjct: 256 IDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPS 315

Query: 115 EADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGP 161
           E++K+  AESTGLDQKQINNWFINQRKRHWKPSE+M F VMD L  P
Sbjct: 316 ESEKVASAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHP 362


>gi|297739199|emb|CBI28850.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/142 (61%), Positives = 103/142 (72%), Gaps = 7/142 (4%)

Query: 15  FFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGS 74
           F    + PS+   G    +      SS+EE  G +T   D +A  EDR LK +LLRK+  
Sbjct: 89  FKALTVAPSDSVCG----SYAGRVGSSEEEVDGNDT-CIDPQA--EDRELKGQLLRKYSG 141

Query: 75  HIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINN 134
           ++GSLK EF KKKKKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINN
Sbjct: 142 YLGSLKQEFLKKKKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINN 201

Query: 135 WFINQRKRHWKPSENMHFAVMD 156
           WFINQRKRHWKPSE+M F VMD
Sbjct: 202 WFINQRKRHWKPSEDMQFVVMD 223


>gi|388493974|gb|AFK35053.1| unknown [Lotus japonicus]
          Length = 183

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/166 (51%), Positives = 114/166 (68%), Gaps = 6/166 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKF-----SNTKDGAASSDEEYSGAETEAQD-AEA 57
           L+ PF     F  +     SE C G        + + + A +S++E S  + EA + +  
Sbjct: 15  LFKPFNEATLFLCDIESQLSELCKGTLTMPSDNNRSDEAAGTSEDELSCGKVEAVEYSGM 74

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R  D+ LK+ LLRK+G ++ SL+ EF KK+KKGKLPK++R+TL DWWN HY+WPYPTE +
Sbjct: 75  RQGDQELKEMLLRKYGGYLSSLRKEFLKKRKKGKLPKDARKTLTDWWNTHYRWPYPTEEE 134

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLF 163
           KLQL+E TGLD KQINNWFINQRKRHWKPSE+M FA+M+ +SG + 
Sbjct: 135 KLQLSEMTGLDIKQINNWFINQRKRHWKPSEDMRFAIMEGVSGGII 180


>gi|388512137|gb|AFK44130.1| unknown [Lotus japonicus]
          Length = 299

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/166 (51%), Positives = 115/166 (69%), Gaps = 6/166 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG---LKFSNTK--DGAASSDEEYSGAETEAQD-AEA 57
           L+ PF     F  +     SE C G   +   N +  + A +S++E S  + EA + +  
Sbjct: 131 LFKPFNEATLFLCDIESQLSELCKGTLTMPSDNNRSDEAAGTSEDELSCGKVEAVEYSGM 190

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R  D+ LK+ LLRK+G ++ SL+ EF KK+KKGKLPK++R+TL DWWN HY+WPYPTE +
Sbjct: 191 RQGDQELKEMLLRKYGGYLSSLRKEFLKKRKKGKLPKDARKTLTDWWNTHYRWPYPTEEE 250

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLF 163
           KLQL+E TGLD KQINNWFINQRKRHWKPSE+M FA+M+ +SG + 
Sbjct: 251 KLQLSEMTGLDIKQINNWFINQRKRHWKPSEDMRFAIMEGVSGGII 296


>gi|114432128|gb|ABI74672.1| class I KNOX-like 1 protein [Elaeis guineensis]
          Length = 352

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/128 (66%), Positives = 97/128 (75%), Gaps = 3/128 (2%)

Query: 39  ASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQ 98
            SS+EE+ GA     D +A  EDR LK +LLRK+  ++ SLK EF KK+KKGKLPKE+RQ
Sbjct: 213 GSSEEEF-GASENYVDPQA--EDRELKGQLLRKYSGYLSSLKQEFLKKRKKGKLPKEARQ 269

Query: 99  TLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
            LLDWWN HYKWPYP+EA KL LA+STGLDQKQINNWFINQRKRHWKPSE M F VMD  
Sbjct: 270 QLLDWWNRHYKWPYPSEAQKLALAQSTGLDQKQINNWFINQRKRHWKPSEEMQFVVMDTA 329

Query: 159 SGPLFTDD 166
               F D+
Sbjct: 330 HPHYFMDN 337


>gi|225450589|ref|XP_002277931.1| PREDICTED: homeobox protein knotted-1-like 1 [Vitis vinifera]
 gi|147820996|emb|CAN77695.1| hypothetical protein VITISV_015614 [Vitis vinifera]
 gi|296089776|emb|CBI39595.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/174 (50%), Positives = 115/174 (66%), Gaps = 15/174 (8%)

Query: 7   PFAAWLSFFFEFIINPSEGCTGLKFSNTK------DGAASSDEEYSGAETEAQDAE---- 56
           PF    SF  +     S  C G   + T       + A +S+EE S  E E  +++    
Sbjct: 128 PFDEATSFLSDIESQLSNLCKGALTAGTSGSYYSDEAAGTSEEELSCGEAEVSESQESLG 187

Query: 57  ARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEA 116
           AR  D+ LK+ L+RK+  ++ SL+ EF KK+KKGKLPK++R  LL+WWN HY+WPYPTE 
Sbjct: 188 ARPGDQELKEMLMRKYSGYLSSLRKEFLKKRKKGKLPKDARTMLLEWWNTHYRWPYPTED 247

Query: 117 DKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS-----GPLFTD 165
           +KL+L+E TGLDQKQINNWFINQRKRHWKPSE+M FA++D +S     GP+F D
Sbjct: 248 EKLKLSEVTGLDQKQINNWFINQRKRHWKPSEDMRFALIDGVSGNMGGGPVFLD 301


>gi|295149266|gb|ADF81046.1| KNOTTED-like homebox protein 1 [Cocos nucifera]
          Length = 333

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/128 (66%), Positives = 97/128 (75%), Gaps = 3/128 (2%)

Query: 39  ASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQ 98
            SS+EE+ GA     D +A  EDR LK +LLRK+  ++ SLK EF KK+KKGKLPKE+RQ
Sbjct: 194 GSSEEEF-GASGSYVDPQA--EDRELKGQLLRKYSGYLSSLKQEFLKKRKKGKLPKEARQ 250

Query: 99  TLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
            LLDWWN HYKWPYP+EA KL LA+STGLDQKQINNWFINQRKRHWKPSE M F VMD  
Sbjct: 251 QLLDWWNRHYKWPYPSEAQKLALAQSTGLDQKQINNWFINQRKRHWKPSEEMQFVVMDTA 310

Query: 159 SGPLFTDD 166
               F D+
Sbjct: 311 HPHYFMDN 318


>gi|86611375|gb|ABD14371.1| homeodomain protein Kn1 [Prunus dulcis]
          Length = 384

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/135 (61%), Positives = 100/135 (74%), Gaps = 6/135 (4%)

Query: 28  GLKFSNTKDGAASSDE-EYSGAETEAQDA-----EARDEDRHLKDKLLRKFGSHIGSLKL 81
            L  S++ D A   D  + +G+  E  D      + + EDR LK +LLRK+  ++GSLK 
Sbjct: 224 ALTLSSSSDSAVCGDGLDRNGSSEEEVDVNNNFIDPQAEDRELKGQLLRKYSGYLGSLKQ 283

Query: 82  EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRK
Sbjct: 284 EFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRK 343

Query: 142 RHWKPSENMHFAVMD 156
           RHWKPSE+M F VMD
Sbjct: 344 RHWKPSEDMQFVVMD 358


>gi|383212085|dbj|BAM08929.1| class I knotted1-like homeobox protein [Asparagus officinalis]
          Length = 343

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/138 (60%), Positives = 103/138 (74%), Gaps = 4/138 (2%)

Query: 23  SEGCTGLKFSNTK--DGAASSDEEY--SGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           + G T   FS  +  +G ASS+E+   SG E E  + + R ED+ LK  LL+K+  ++ S
Sbjct: 180 TNGATASIFSTDEKCEGVASSEEDQDGSGGEAEHPEIDPRAEDKELKHHLLKKYSGYLSS 239

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L+ E SKKKKKGKLPKE+RQ LL+WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFIN
Sbjct: 240 LRHELSKKKKKGKLPKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFIN 299

Query: 139 QRKRHWKPSENMHFAVMD 156
           QRKRHWKPSE+M F VMD
Sbjct: 300 QRKRHWKPSEDMQFVVMD 317


>gi|383212083|dbj|BAM08928.1| class I knotted1-like homeobox protein [Asparagus asparagoides]
          Length = 341

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/138 (58%), Positives = 101/138 (73%), Gaps = 7/138 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           I +  E C G+       G++  D++ SG E E  + + R ED+ LK  LL+K+  ++ S
Sbjct: 185 IFSTDEKCEGV-------GSSEEDQDGSGGEAEHPEIDPRAEDKELKHHLLKKYSGYLSS 237

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L+ E SKKKKKGKLPKE+RQ LL+WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFIN
Sbjct: 238 LRHELSKKKKKGKLPKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFIN 297

Query: 139 QRKRHWKPSENMHFAVMD 156
           QRKRHWKPSE+M F VMD
Sbjct: 298 QRKRHWKPSEDMQFVVMD 315


>gi|289655988|gb|ADD14042.1| class 1 KNOTTED-like transcription factor STM-like2 [Prunus
           persica]
          Length = 383

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/135 (61%), Positives = 100/135 (74%), Gaps = 6/135 (4%)

Query: 28  GLKFSNTKDGAASSDE-EYSGAETEAQDA-----EARDEDRHLKDKLLRKFGSHIGSLKL 81
            L  S++ D A   D  + +G+  E  D      + + EDR LK +LLRK+  ++GSLK 
Sbjct: 223 ALTLSSSSDSAVCGDGLDRNGSSEEEVDVNNNFIDPQAEDRELKGQLLRKYSGYLGSLKQ 282

Query: 82  EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRK
Sbjct: 283 EFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRK 342

Query: 142 RHWKPSENMHFAVMD 156
           RHWKPSE+M F VMD
Sbjct: 343 RHWKPSEDMQFVVMD 357


>gi|380746847|gb|AFE48354.1| KNOTTED-like 1-3a homeodomain protein, partial [Cuscuta pentagona]
          Length = 272

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/126 (65%), Positives = 97/126 (76%), Gaps = 3/126 (2%)

Query: 36  DGAASSDEEY---SGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           +G  SS+E+    S  ETE  + + R EDR LK+ LLRK+  ++ SLK E SKKKKKGKL
Sbjct: 123 EGVGSSEEDQDNNSPGETELPEIDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKGKL 182

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHF 152
           PKE+RQ LL WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F
Sbjct: 183 PKEARQKLLSWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQF 242

Query: 153 AVMDNL 158
            VMD L
Sbjct: 243 MVMDGL 248


>gi|168831390|gb|ACA34976.1| KNOX1, partial [Streptocarpus glandulosissimus]
          Length = 220

 Score =  149 bits (375), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/137 (59%), Positives = 101/137 (73%), Gaps = 7/137 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           I+N  E C G+        ++  D+E SG ETE  + + R ED+ LK+ LLRK+  ++ S
Sbjct: 91  ILNSEEKCEGV-------VSSEEDQENSGGETELAEIDPRAEDKELKNHLLRKYSGYLSS 143

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK E SKKKKKGKLPK++RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQI NWFIN
Sbjct: 144 LKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQIYNWFIN 203

Query: 139 QRKRHWKPSENMHFAVM 155
           QRKRHW+PSE+M F VM
Sbjct: 204 QRKRHWEPSEDMQFMVM 220


>gi|300174940|dbj|BAJ10705.1| shoot meristemless ortholog [Hydrobryum japonicum]
          Length = 351

 Score =  148 bits (374), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/138 (62%), Positives = 102/138 (73%), Gaps = 7/138 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           + +P+ G +G       +  ASSDEE  G      D +A  ED+ LK +LLR++  ++GS
Sbjct: 197 VSSPNSGYSG----EANERNASSDEEGDGNNVFI-DPQA--EDQELKGQLLRRYSGYLGS 249

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK EF KK+KKGKLPKE+RQ LLDWWN HYKWPYP+E  KL LAESTGLDQKQINNWFIN
Sbjct: 250 LKQEFMKKRKKGKLPKEARQQLLDWWNRHYKWPYPSETQKLALAESTGLDQKQINNWFIN 309

Query: 139 QRKRHWKPSENMHFAVMD 156
           QRKRHWKPSE+M F VMD
Sbjct: 310 QRKRHWKPSEDMQFVVMD 327


>gi|270610244|gb|ACZ92179.1| shootmeristemless [Cichorium intybus x Cichorium endivia]
          Length = 361

 Score =  148 bits (374), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 97/135 (71%), Gaps = 7/135 (5%)

Query: 29  LKFSNTKDGAASSDEEYSGAETEAQDAEARD-------EDRHLKDKLLRKFGSHIGSLKL 81
           + FS +  G      + +G+  E  D +  +       E+R LK +LLRK+  ++GSLK 
Sbjct: 204 ISFSASDSGCGDGGMDRNGSSEEDLDVDVNNNMVDPQAEERELKGQLLRKYSGYLGSLKQ 263

Query: 82  EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           EF KK+KKGKLPKE+RQ LLDWW  HYKWPYP+EA KL LAESTGLDQKQINNWFINQRK
Sbjct: 264 EFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSEAQKLALAESTGLDQKQINNWFINQRK 323

Query: 142 RHWKPSENMHFAVMD 156
           RHWKPSE+M F VMD
Sbjct: 324 RHWKPSEDMQFVVMD 338


>gi|307335622|gb|ADN43388.1| KNOX1 [Agave tequilana]
          Length = 357

 Score =  148 bits (374), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/133 (60%), Positives = 98/133 (73%), Gaps = 7/133 (5%)

Query: 24  EGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEF 83
           E C G+ FS         D++ SG E E  + + R ED+ LK  LL+K+  ++ SL+ E 
Sbjct: 204 EKCEGVGFSE-------EDQDDSGGEAEHPEIDPRAEDKELKRHLLKKYSRYLSSLRHEL 256

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           SKKKKKGKLPKE+RQ LL+WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRH
Sbjct: 257 SKKKKKGKLPKEARQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 316

Query: 144 WKPSENMHFAVMD 156
           WKPSE+M F VMD
Sbjct: 317 WKPSEDMQFVVMD 329


>gi|300174946|dbj|BAJ10708.1| shoot meristemless ortholog [Cladopus doianus]
          Length = 352

 Score =  148 bits (374), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/148 (58%), Positives = 107/148 (72%), Gaps = 7/148 (4%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           + +P+ G +G       +  ASSDEE  G      D +A  ED+ LK +LLR++  ++GS
Sbjct: 197 VSSPNSGYSG----EANERNASSDEEGDGNNVFI-DPQA--EDQELKGQLLRRYSGYLGS 249

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFIN
Sbjct: 250 LKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFIN 309

Query: 139 QRKRHWKPSENMHFAVMDNLSGPLFTDD 166
           QRKRHWKPSE+M FAVMD      + D+
Sbjct: 310 QRKRHWKPSEDMQFAVMDGAHPHYYMDN 337


>gi|22074785|gb|AAM47027.1| shootmeristemless-like [Petunia x hybrida]
          Length = 347

 Score =  148 bits (373), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 82/136 (60%), Positives = 97/136 (71%), Gaps = 3/136 (2%)

Query: 31  FSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKG 90
           F    D   SS+EE    +      + + EDR LK +LLRK+  ++GSLK EF KK+KKG
Sbjct: 200 FGEAMDRNGSSEEE---VDVNNSLVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKG 256

Query: 91  KLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENM 150
           KLPKE+RQ LLDWW  HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M
Sbjct: 257 KLPKEARQQLLDWWTRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDM 316

Query: 151 HFAVMDNLSGPLFTDD 166
            F VMD      + D+
Sbjct: 317 QFVVMDAAHPHYYIDN 332


>gi|300676311|gb|ADK26525.1| HERMIT/STM protein [Petunia x hybrida]
          Length = 347

 Score =  148 bits (373), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 82/136 (60%), Positives = 97/136 (71%), Gaps = 3/136 (2%)

Query: 31  FSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKG 90
           F    D   SS+EE    +      + + EDR LK +LLRK+  ++GSLK EF KK+KKG
Sbjct: 200 FGEAMDRNGSSEEE---VDVNNSLVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKG 256

Query: 91  KLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENM 150
           KLPKE+RQ LLDWW  HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M
Sbjct: 257 KLPKEARQQLLDWWTRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDM 316

Query: 151 HFAVMDNLSGPLFTDD 166
            F VMD      + D+
Sbjct: 317 QFVVMDAAHPHYYIDN 332


>gi|300174952|dbj|BAJ10711.1| shoot meristemless ortholog [Polypleurum stylosum]
          Length = 352

 Score =  148 bits (373), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/138 (62%), Positives = 103/138 (74%), Gaps = 7/138 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           + +P+ G +G       +  ASSDEE  G      D +A  ED+ LK +LLR++  ++GS
Sbjct: 197 VSSPNSGYSG----EGNERNASSDEEGDGNNVFI-DPQA--EDQELKGQLLRRYSGYLGS 249

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK EF KK+KKGKLPKE+RQ LLDWWN HYKWPYP+E+ KL LAESTGLDQKQINNWFIN
Sbjct: 250 LKQEFMKKRKKGKLPKEARQQLLDWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFIN 309

Query: 139 QRKRHWKPSENMHFAVMD 156
           QRKRHWKPSE+M F VMD
Sbjct: 310 QRKRHWKPSEDMQFVVMD 327


>gi|4099828|gb|AAD00692.1| homeobox transcription factor SKN2 [Picea mariana]
          Length = 442

 Score =  148 bits (373), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/166 (56%), Positives = 111/166 (66%), Gaps = 10/166 (6%)

Query: 4   LYLPFAAWLSFF--FEFIINP-SEGCTGLKFSNTKD----GAASSDE--EYSGAETEAQD 54
           L  PF   +SF    E  +N  S+G   +  S   D    G ASS+E  + SG ET+ Q+
Sbjct: 256 LTKPFKEAMSFLKKIEAQLNSLSKGTIRISPSAENDEKTEGGASSEEVEDGSGGETDFQE 315

Query: 55  AEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYP 113
            +    EDR LKD LLRK+  ++ SLK EF KKKKKGKLPK++RQ LLDWW  HYKWPYP
Sbjct: 316 VDHHAVEDRELKDHLLRKYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWTVHYKWPYP 375

Query: 114 TEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           +E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+M    MD  S
Sbjct: 376 SETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMQLMAMDGQS 421


>gi|85543302|gb|ABC71531.1| KNOTTED1-like homeodomain protein [Leersia virginica]
          Length = 360

 Score =  148 bits (373), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 73/121 (60%), Positives = 90/121 (74%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL K+  ++ SLK E SKKKKKG+LPK++
Sbjct: 222 GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLNKYSGYLSSLKQELSKKKKKGELPKDA 281

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  H KWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKPS+ M F +MD
Sbjct: 282 RQQLLSWWELHCKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD 341

Query: 157 N 157
            
Sbjct: 342 G 342


>gi|3928843|gb|AAC84001.1| homeobox protein [Picea abies]
          Length = 434

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/166 (56%), Positives = 111/166 (66%), Gaps = 10/166 (6%)

Query: 4   LYLPFAAWLSFF--FEFIINP-SEGCTGLKFSNTKD----GAASSDE--EYSGAETEAQD 54
           L  PF   +SF    E  +N  S+G   +  S   D    G ASS+E  + SG ET+ Q+
Sbjct: 248 LTKPFKEAMSFLKKIEAQLNSLSKGTIRISPSAENDEKTEGGASSEEVEDGSGGETDFQE 307

Query: 55  AEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYP 113
            +    EDR LKD LLRK+  ++ SLK EF KKKKKGKLPK++RQ LLDWW  HYKWPYP
Sbjct: 308 VDHHAVEDRELKDHLLRKYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWTVHYKWPYP 367

Query: 114 TEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           +E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+M    MD  S
Sbjct: 368 SETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMQLMAMDGQS 413


>gi|3929314|gb|AAC79869.1| homeobox protein OVG2 [Dendrobium grex Madame Thong-In]
          Length = 101

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/101 (78%), Positives = 88/101 (87%), Gaps = 1/101 (0%)

Query: 67  KLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTG 126
           KLLRK+  ++ SLK EFSKKKKKGKLPKE+RQ L +WW AHYKWPYPTEADK+ LAE+TG
Sbjct: 1   KLLRKYSGYLSSLKQEFSKKKKKGKLPKEARQILFEWWTAHYKWPYPTEADKIALAEATG 60

Query: 127 LDQKQINNWFINQRKRHWKPSENMHFAVMDNLS-GPLFTDD 166
           LDQKQINNWFINQRKRHWKP+ENMHF+VMDN S   LF DD
Sbjct: 61  LDQKQINNWFINQRKRHWKPAENMHFSVMDNSSTSSLFADD 101


>gi|55740703|gb|AAV63999.1| homeobox transcription factor KN4 [Pinus strobus]
          Length = 124

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/111 (69%), Positives = 91/111 (81%)

Query: 49  ETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHY 108
           E E  + + R EDR LKD+LLRK+  +  SLK EF KKKKKGKLPKE+RQ LL+WWN HY
Sbjct: 1   EIEVHEVDPRAEDRELKDQLLRKYSGYFNSLKQEFLKKKKKGKLPKEARQKLLEWWNVHY 60

Query: 109 KWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           KWPYP+E DK+ LAES GLDQKQINNWFINQRKRHWKPSE++ F +MD+L+
Sbjct: 61  KWPYPSETDKVSLAESIGLDQKQINNWFINQRKRHWKPSEDIQFVIMDSLN 111


>gi|20977642|gb|AAM28231.1| knotted-1-like protein 1 [Helianthus annuus]
          Length = 362

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 93/121 (76%), Gaps = 3/121 (2%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           D   SS+EE    +      + + EDR LK +LLRK+  ++GSLK EF KK+KKGKLPKE
Sbjct: 220 DKNGSSEEE---VDVNNNLIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 276

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LLDWW  HYKWPYP+EA KL LAESTGLDQKQINNWFINQRKRHWKPSE+M F VM
Sbjct: 277 ARQQLLDWWTRHYKWPYPSEAQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 336

Query: 156 D 156
           D
Sbjct: 337 D 337


>gi|345649241|gb|AEO14151.1| STM1 protein [Eschscholzia californica subsp. californica]
          Length = 362

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/132 (61%), Positives = 99/132 (75%), Gaps = 2/132 (1%)

Query: 28  GLKFSNTKDGAASSDEEYSGAETEAQD--AEARDEDRHLKDKLLRKFGSHIGSLKLEFSK 85
            L  S++  G A +    S  + +A D   + + EDR LK +LLRK+  ++GSLK EF K
Sbjct: 207 ALTVSDSVGGEAVNRNGSSDEDIDANDNYIDPQAEDRELKGQLLRKYSGYLGSLKQEFLK 266

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ K+ LAESTGLDQKQINNWFINQRKRHWK
Sbjct: 267 KRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKIALAESTGLDQKQINNWFINQRKRHWK 326

Query: 146 PSENMHFAVMDN 157
           PSE M F VMD+
Sbjct: 327 PSEEMQFVVMDS 338


>gi|356574087|ref|XP_003555183.1| PREDICTED: RNA polymerase II-associated protein 3-like [Glycine
           max]
          Length = 507

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/129 (59%), Positives = 100/129 (77%), Gaps = 4/129 (3%)

Query: 36  DGAASSDEEYSGAETEAQDAE----ARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           + A  S++E S  + EA D +     R  D+ LK+ LLRK+G ++ SL+ EF KK+KKGK
Sbjct: 372 EAAGISEDELSWEKVEAVDGDESSGPRPGDQELKEMLLRKYGGYLSSLRKEFLKKRKKGK 431

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPK++R  L+DWWN HY+WPYPTE +K+QL+E TGLDQKQINNWFINQRKRHWKP+E+M 
Sbjct: 432 LPKDARMILMDWWNTHYRWPYPTEEEKVQLSEMTGLDQKQINNWFINQRKRHWKPTEDMR 491

Query: 152 FAVMDNLSG 160
           FA+MD +SG
Sbjct: 492 FAIMDGVSG 500


>gi|340764132|gb|AEK69290.1| INVAGINATA-like protein [Linaria vulgaris]
          Length = 346

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/134 (60%), Positives = 98/134 (73%), Gaps = 5/134 (3%)

Query: 28  GLKFSNTKDGAASSDEEYSGAETEAQD-----AEARDEDRHLKDKLLRKFGSHIGSLKLE 82
            L  S++ + A     +  G+  E  D      + + EDR LK +LLRK+  ++GSLK E
Sbjct: 187 ALTVSSSDNSACGDAMDRQGSSEEEADMNNNFIDPQAEDRELKGQLLRKYSGYLGSLKQE 246

Query: 83  FSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           F KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKR
Sbjct: 247 FMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKR 306

Query: 143 HWKPSENMHFAVMD 156
           HWKPSE+M F VMD
Sbjct: 307 HWKPSEDMQFVVMD 320


>gi|218193820|gb|EEC76247.1| hypothetical protein OsI_13685 [Oryza sativa Indica Group]
          Length = 559

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/128 (57%), Positives = 91/128 (71%), Gaps = 4/128 (3%)

Query: 36  DGAASSDEEYSGAETEAQDAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPK 94
           +G  SS+EE    +T   +AE  D  D+ LK +LLRK+G  +G L+ EFSK+ KKGKLPK
Sbjct: 398 EGTGSSEEEQD-QDTSCPEAEEIDPSDKQLKHQLLRKYGGSLGDLRQEFSKRTKKGKLPK 456

Query: 95  ESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS--ENMHF 152
           E+RQ LL WW  HYKWPYP+E +K+ LA++TGLDQKQINNWFINQRKRHWKP+      F
Sbjct: 457 EARQKLLHWWELHYKWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRHWKPTPVAGTAF 516

Query: 153 AVMDNLSG 160
             M+   G
Sbjct: 517 PTMEAAGG 524


>gi|449434394|ref|XP_004134981.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
 gi|449518023|ref|XP_004166043.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
          Length = 340

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/121 (65%), Positives = 94/121 (77%), Gaps = 3/121 (2%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           D   SS+EE    +      + + EDR LK +LLRK+  ++GSLK EF KK+KKGKLPKE
Sbjct: 198 DRNGSSEEE---VDINGHSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 254

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LLDWW+ HYKWPYP+E+ KL LA+STGLDQKQINNWFINQRKRHWKPSE+M F VM
Sbjct: 255 ARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 314

Query: 156 D 156
           D
Sbjct: 315 D 315


>gi|187606720|emb|CAQ51274.1| putative knotted1-like protein [Helianthus tuberosus]
          Length = 361

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 93/121 (76%), Gaps = 3/121 (2%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           D   SS+EE    +      + + EDR LK +LLRK+  ++GSLK EF KK+KKGKLPKE
Sbjct: 219 DKNGSSEEE---VDVNNNLIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 275

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LLDWW  HYKWPYP+EA KL LAESTGLDQKQINNWFINQRKRHWKPSE+M F VM
Sbjct: 276 ARQQLLDWWTRHYKWPYPSEAQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 335

Query: 156 D 156
           D
Sbjct: 336 D 336


>gi|300174956|dbj|BAJ10713.1| shoot meristemless ortholog [Weddellina squamulosa]
          Length = 356

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/134 (61%), Positives = 99/134 (73%), Gaps = 4/134 (2%)

Query: 23  SEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLE 82
           S  C+G       +  ASS+EE  G        + + EDR LK +LLR++  ++GSLK E
Sbjct: 202 SSPCSGYS-GEANERNASSEEEGDGNNVFI---DPQAEDRELKGQLLRRYSGYLGSLKQE 257

Query: 83  FSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           F KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKR
Sbjct: 258 FMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKR 317

Query: 143 HWKPSENMHFAVMD 156
           HWKPSE+M F VMD
Sbjct: 318 HWKPSEDMQFVVMD 331


>gi|300174964|dbj|BAJ10717.1| shoot meristemless ortholog [Terniopsis minor]
          Length = 379

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/127 (62%), Positives = 97/127 (76%), Gaps = 2/127 (1%)

Query: 33  NTKDGAASSDEEYSGAETEAQD--AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKG 90
           N+  G A+     S  ETE  +   + + ED  LK +LLR++  ++GSLK EF KK+KKG
Sbjct: 229 NSDSGDANDRNASSEEETEGNNMFIDPQAEDHELKGQLLRRYSGYLGSLKQEFMKKRKKG 288

Query: 91  KLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENM 150
           KLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M
Sbjct: 289 KLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDM 348

Query: 151 HFAVMDN 157
            F VMD+
Sbjct: 349 QFVVMDS 355


>gi|285804235|gb|ADC35598.1| class I KNOX homeobox transcription factor KNOPE6 [Prunus persica]
 gi|289655984|gb|ADD14040.1| class 1 KNOTTED-like transcription factor KNOPE6 [Prunus persica]
          Length = 334

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/135 (59%), Positives = 101/135 (74%), Gaps = 5/135 (3%)

Query: 33  NTKDGAASSDEEYSGAETEA----QDAEAR-DEDRHLKDKLLRKFGSHIGSLKLEFSKKK 87
           N+ +G  SS+EE+S  E EA    + A AR   DR LKD LL K+  ++ +L+ EF KK+
Sbjct: 182 NSDEGVGSSEEEFSCGEVEAAESQETAAARAGGDRELKDMLLHKYSGYLTNLRKEFLKKR 241

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           KKGKLPK++R  LLDWW  HY+WPYPTE +KL L+E TGLDQKQINNWFINQRKRHWKPS
Sbjct: 242 KKGKLPKDARTALLDWWTTHYRWPYPTEEEKLHLSEVTGLDQKQINNWFINQRKRHWKPS 301

Query: 148 ENMHFAVMDNLSGPL 162
           E+M FA+M+ + G +
Sbjct: 302 EDMRFALMEGVGGSI 316


>gi|33333535|gb|AAQ11884.1| knotted 4 [Hordeum vulgare]
          Length = 136

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 87/111 (78%), Gaps = 2/111 (1%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           GA SS+++   +  E  D  A  ED+ LK +LLRK+G ++GSL+ EF K++KKGKLPKE+
Sbjct: 1   GAGSSEDDLDASCVEEIDPSA--EDKELKHQLLRKYGGYVGSLRQEFCKRRKKGKLPKEA 58

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           RQ LL WW  H KWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKP+
Sbjct: 59  RQKLLHWWELHSKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPA 109


>gi|55669503|gb|AAV54619.1| homeobox transcription factor KN2 [Pinus taeda]
          Length = 429

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/167 (55%), Positives = 112/167 (67%), Gaps = 12/167 (7%)

Query: 4   LYLPFAAWLSFF--FEFIINPSEGCTGLKFSNT------KDGAASSDE--EYSGAETEAQ 53
           L  PF   +SF    E  +N S G   ++ S +       +G ASS+E  + SG ET+ Q
Sbjct: 243 LTKPFKEAMSFLKKIEAQLN-SLGKGTIRISPSAENDEKTEGGASSEEVEDGSGGETDFQ 301

Query: 54  DAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPY 112
           + +    EDR LKD LLRK+  ++ SLK EF KKKKKGKLPK++RQ LLDWW  HYKWPY
Sbjct: 302 EVDHHAVEDRELKDHLLRKYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWTVHYKWPY 361

Query: 113 PTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           P+E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+M    MD  S
Sbjct: 362 PSETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMQLMAMDGQS 408


>gi|188531742|gb|ACD62901.1| STM-like protein [Ipomoea nil]
          Length = 326

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 98/135 (72%), Gaps = 3/135 (2%)

Query: 32  SNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           ++  D   SS+EE    +      + + EDR LK +LLRK+  ++GSLK EF KK+KKGK
Sbjct: 180 ADAMDRNVSSEEE---VDVTTGFIDPQVEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGK 236

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LLDWW  HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M 
Sbjct: 237 LPKEARQQLLDWWTRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 296

Query: 152 FAVMDNLSGPLFTDD 166
           F VMD      + D+
Sbjct: 297 FVVMDTAHPHYYMDN 311


>gi|160420030|dbj|BAF93478.1| class-I knotted1-like homeobox protein IBKN1 [Ipomoea batatas]
          Length = 322

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 98/135 (72%), Gaps = 3/135 (2%)

Query: 32  SNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           ++  D   SS+EE    +      + + EDR LK +LLRK+  ++GSLK EF KK+KKGK
Sbjct: 176 ADAMDRNVSSEEE---VDVTTGFIDPQVEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGK 232

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LLDWW  HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M 
Sbjct: 233 LPKEARQQLLDWWTRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 292

Query: 152 FAVMDNLSGPLFTDD 166
           F VMD      + D+
Sbjct: 293 FVVMDTAHPHYYMDN 307


>gi|132424651|gb|ABO33478.1| class I KNOX homeobox transcription factor [Medicago truncatula]
          Length = 374

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/128 (63%), Positives = 97/128 (75%), Gaps = 2/128 (1%)

Query: 29  LKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKK 88
           +  S   D   SS+E++        D +A  EDR LK +LLRK+  ++GSLK EF KK+K
Sbjct: 224 IACSEGGDRNGSSEEDHVDLYNNMIDPQA--EDRELKGQLLRKYSGYLGSLKQEFMKKRK 281

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSE 148
           KGKLPKE+RQ LL+WW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE
Sbjct: 282 KGKLPKEARQQLLEWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSE 341

Query: 149 NMHFAVMD 156
           +M F VMD
Sbjct: 342 DMQFVVMD 349


>gi|11037020|gb|AAG27464.1|AF308454_1 knotted class I homeodomain KNOX [Medicago truncatula]
          Length = 381

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/128 (63%), Positives = 97/128 (75%), Gaps = 2/128 (1%)

Query: 29  LKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKK 88
           +  S   D   SS+E++        D +A  EDR LK +LLRK+  ++GSLK EF KK+K
Sbjct: 231 IACSEGGDRNGSSEEDHVDLYNNMIDPQA--EDRELKGQLLRKYSGYLGSLKQEFMKKRK 288

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSE 148
           KGKLPKE+RQ LL+WW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE
Sbjct: 289 KGKLPKEARQQLLEWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSE 348

Query: 149 NMHFAVMD 156
           +M F VMD
Sbjct: 349 DMQFVVMD 356


>gi|116783734|gb|ABK23067.1| unknown [Picea sitchensis]
          Length = 241

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/166 (56%), Positives = 111/166 (66%), Gaps = 10/166 (6%)

Query: 4   LYLPFAAWLSFF--FEFIINP-SEGCTGLKFSNTKD----GAASSDE--EYSGAETEAQD 54
           L  PF   +SF    E  +N  S+G   +  S   D    G ASS+E  + SG ET+ Q+
Sbjct: 55  LTKPFKEAMSFLKKIEAQLNSLSKGTIRISPSAENDEKTEGGASSEEVEDGSGGETDFQE 114

Query: 55  AEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYP 113
            +    EDR LKD LLRK+  ++ SLK EF KKKKKGKLPK++RQ LLDWW  HYKWPYP
Sbjct: 115 VDHHAVEDRELKDHLLRKYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWTVHYKWPYP 174

Query: 114 TEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           +E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+M    MD  S
Sbjct: 175 SETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMQLMAMDGQS 220


>gi|162463933|ref|NP_001105084.1| liguleless4 [Zea mays]
 gi|30348863|gb|AAP31409.1|AF457118_1 knotted1-like homeodomain protein liguleless4a [Zea mays]
 gi|195607142|gb|ACG25401.1| homeotic protein knotted-1 [Zea mays]
 gi|238009140|gb|ACR35605.1| unknown [Zea mays]
 gi|408690288|gb|AFU81604.1| HB-type transcription factor, partial [Zea mays subsp. mays]
 gi|413950086|gb|AFW82735.1| liguleless4 [Zea mays]
          Length = 307

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/163 (50%), Positives = 107/163 (65%), Gaps = 6/163 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGC-TGLKFSNTKDGAASSDEEYSGAETEA-----QDAEA 57
           L  PF    SF        S  C      S+   G++  DE  SG +TEA     Q+  +
Sbjct: 127 LSRPFDEAASFLSSVRTQLSSLCGAAASLSDEMVGSSEEDEACSGGDTEATEPGQQEHSS 186

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R  DR LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  L+DWWN HY+WPYPTE D
Sbjct: 187 RLADRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEED 246

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           K++LA +TGLD KQINNWFINQRKRHWKPSE+M FA+M+ ++G
Sbjct: 247 KVRLAAATGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVTG 289


>gi|63168778|gb|AAY34562.1| shoot meristemless-like protein [Eschscholzia californica subsp.
           californica]
          Length = 233

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/132 (61%), Positives = 99/132 (75%), Gaps = 2/132 (1%)

Query: 28  GLKFSNTKDGAASSDEEYSGAETEAQD--AEARDEDRHLKDKLLRKFGSHIGSLKLEFSK 85
            L  S++  G A +    S  + +A D   + + EDR LK +LLRK+  ++GSLK EF K
Sbjct: 78  ALTVSDSVGGEAVNRNGSSDEDIDANDNYIDPQAEDRELKGQLLRKYSGYLGSLKQEFLK 137

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ K+ LAESTGLDQKQINNWFINQRKRHWK
Sbjct: 138 KRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKIALAESTGLDQKQINNWFINQRKRHWK 197

Query: 146 PSENMHFAVMDN 157
           PSE M F VMD+
Sbjct: 198 PSEEMQFVVMDS 209


>gi|380746841|gb|AFE48351.1| KNOTTED-like 1-1 homeodomain protein [Cuscuta pentagona]
          Length = 390

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/119 (63%), Positives = 94/119 (78%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D++ SG E E +D + R +DR LK+ LLRK+  ++  LK E SKKKKKGKLPKE+
Sbjct: 225 GSSEEDQDNSGGEAEVRDMDPRAQDRELKNHLLRKYSGYLSGLKQELSKKKKKGKLPKEA 284

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           RQ LL WW  HYKWPYP+E++K+ LAE+ GLDQKQINNWFINQRKRHWKPSE+M F VM
Sbjct: 285 RQKLLSWWELHYKWPYPSESEKVALAEAPGLDQKQINNWFINQRKRHWKPSEDMQFMVM 343


>gi|20139943|sp|Q9M6D9.1|STM_BRAOL RecName: Full=Homeobox protein SHOOT MERISTEMLESS
 gi|7340350|gb|AAF23753.2|AF193813_1 shoot meristemless [Brassica oleracea]
          Length = 383

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 95/125 (76%), Gaps = 5/125 (4%)

Query: 37  GAASSDEEYSGAETEAQD-----AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           G A+ +   +G+  E  D      + + EDR LK +LLRK+  ++GSLK EF KK+KKGK
Sbjct: 232 GEAAIERNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGK 291

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LLDWW+ HYKWPYP+E  KL LAESTGLDQKQINNWFINQRKRHWKPSE+M 
Sbjct: 292 LPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 351

Query: 152 FAVMD 156
           F VMD
Sbjct: 352 FVVMD 356


>gi|57116570|gb|AAW33773.1| STM1 protein [Streptocarpus dunnii]
          Length = 356

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 100/135 (74%), Gaps = 7/135 (5%)

Query: 29  LKFSNTKDGAASSDE--EYSGAETEAQDA-----EARDEDRHLKDKLLRKFGSHIGSLKL 81
           L  S++ D  A  +   E +G+  E  D      + + EDR LK +LLR++  ++G+LK 
Sbjct: 197 LTLSHSSDSGACGEAVMERNGSSEEEFDVNNSFIDPQAEDRELKGQLLRRYSGYLGNLKQ 256

Query: 82  EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRK
Sbjct: 257 EFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRK 316

Query: 142 RHWKPSENMHFAVMD 156
           RHWKPSE+M F VMD
Sbjct: 317 RHWKPSEDMQFVVMD 331


>gi|27413549|gb|AAO11694.1| Knotted-1-like homeobox protein H1 [Nicotiana tabacum]
          Length = 343

 Score =  145 bits (367), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/138 (58%), Positives = 100/138 (72%), Gaps = 4/138 (2%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           + + SE    L  +  ++G  SS+E     +      + + ED+ LK +LLRK+  ++GS
Sbjct: 185 LTSSSESVAALGEAIDRNGNGSSEE----VDVNNGFIDLQAEDQELKGQLLRKYSGYLGS 240

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK EF KK+KKGKLPKE+RQ LLDWW  HYKWPYP+E+ KL LAESTGLDQKQINNWFIN
Sbjct: 241 LKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKLALAESTGLDQKQINNWFIN 300

Query: 139 QRKRHWKPSENMHFAVMD 156
           QRKRHWKPSE+M F VMD
Sbjct: 301 QRKRHWKPSEDMQFVVMD 318


>gi|98962493|gb|ABF59514.1| shoot meristemless [Cardamine hirsuta]
          Length = 383

 Score =  145 bits (367), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 94/125 (75%), Gaps = 5/125 (4%)

Query: 37  GAASSDEEYSGAETEAQD-----AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           G  + D   +G+  E  D      + + EDR LK +LLRK+  ++GSLK EF KK+KKGK
Sbjct: 232 GETAMDRNNNGSSEEEVDMNNEFIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGK 291

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LLDWW+ HYKWPYP+E  KL LAESTGLDQKQINNWFINQRKRHWKPSE+M 
Sbjct: 292 LPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 351

Query: 152 FAVMD 156
           F VMD
Sbjct: 352 FVVMD 356


>gi|15220767|ref|NP_176426.1| homeobox protein SHOOT MERISTEMLESS [Arabidopsis thaliana]
 gi|20141647|sp|Q38874.2|STM_ARATH RecName: Full=Homeobox protein SHOOT MERISTEMLESS
 gi|332195837|gb|AEE33958.1| homeobox protein SHOOT MERISTEMLESS [Arabidopsis thaliana]
          Length = 382

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 94/125 (75%), Gaps = 5/125 (4%)

Query: 37  GAASSDEEYSGAETEAQD-----AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           G  + D   +G+  E  D      + + EDR LK +LLRK+  ++GSLK EF KK+KKGK
Sbjct: 231 GETAIDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGK 290

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LLDWW+ HYKWPYP+E  KL LAESTGLDQKQINNWFINQRKRHWKPSE+M 
Sbjct: 291 LPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 350

Query: 152 FAVMD 156
           F VMD
Sbjct: 351 FVVMD 355


>gi|222625875|gb|EEE60007.1| hypothetical protein OsJ_12748 [Oryza sativa Japonica Group]
          Length = 341

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 71/127 (55%), Positives = 88/127 (69%), Gaps = 6/127 (4%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           D  A S+ E +G+  E QD      D+ LK +LLRK+G  +G L+  FSK+ KKGKLPKE
Sbjct: 184 DSLAESNCEGTGSSEEEQDPS----DKQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKE 239

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSE--NMHFA 153
           +RQ LL WW  HYKWPYP+E +K+ LA++TGLDQKQINNWFINQRKRHWKP+      F 
Sbjct: 240 ARQKLLHWWELHYKWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRHWKPTPVAGTAFP 299

Query: 154 VMDNLSG 160
            M+   G
Sbjct: 300 TMEAAGG 306


>gi|1167916|gb|AAC49148.1| class I knotted-like homeodomain containing protein; Method:
           conceptual translation supplied by author [Arabidopsis
           thaliana]
 gi|1586022|prf||2202329A homeo domain protein
          Length = 382

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 94/125 (75%), Gaps = 5/125 (4%)

Query: 37  GAASSDEEYSGAETEAQD-----AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           G  + D   +G+  E  D      + + EDR LK +LLRK+  ++GSLK EF KK+KKGK
Sbjct: 231 GETAIDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGK 290

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LLDWW+ HYKWPYP+E  KL LAESTGLDQKQINNWFINQRKRHWKPSE+M 
Sbjct: 291 LPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 350

Query: 152 FAVMD 156
           F VMD
Sbjct: 351 FVVMD 355


>gi|115455613|ref|NP_001051407.1| Os03g0771500 [Oryza sativa Japonica Group]
 gi|122246824|sp|Q10ED2.1|KNOS8_ORYSJ RecName: Full=Homeobox protein knotted-1-like 8; AltName:
           Full=Homeobox protein OSH43
 gi|5103727|dbj|BAA79225.1| knotted1-type homeobox protein OSH43 [Oryza sativa]
 gi|108711297|gb|ABF99092.1| KNOX1 domain containing protein, expressed [Oryza sativa Japonica
           Group]
 gi|113549878|dbj|BAF13321.1| Os03g0771500 [Oryza sativa Japonica Group]
          Length = 341

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 71/127 (55%), Positives = 88/127 (69%), Gaps = 6/127 (4%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           D  A S+ E +G+  E QD      D+ LK +LLRK+G  +G L+  FSK+ KKGKLPKE
Sbjct: 184 DSLAESNCEGTGSSEEEQDPS----DKQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKE 239

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSE--NMHFA 153
           +RQ LL WW  HYKWPYP+E +K+ LA++TGLDQKQINNWFINQRKRHWKP+      F 
Sbjct: 240 ARQKLLHWWELHYKWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRHWKPTPVAGTAFP 299

Query: 154 VMDNLSG 160
            M+   G
Sbjct: 300 TMEAAGG 306


>gi|297837183|ref|XP_002886473.1| hypothetical protein ARALYDRAFT_338146 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332314|gb|EFH62732.1| hypothetical protein ARALYDRAFT_338146 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 94/125 (75%), Gaps = 5/125 (4%)

Query: 37  GAASSDEEYSGAETEAQD-----AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           G  + D   +G+  E  D      + + EDR LK +LLRK+  ++GSLK EF KK+KKGK
Sbjct: 181 GETAIDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGK 240

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LLDWW+ HYKWPYP+E  KL LAESTGLDQKQINNWFINQRKRHWKPSE+M 
Sbjct: 241 LPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 300

Query: 152 FAVMD 156
           F VMD
Sbjct: 301 FVVMD 305


>gi|168831394|gb|ACA34978.1| KNOX1 [Streptocarpus rexii]
          Length = 358

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/140 (61%), Positives = 103/140 (73%), Gaps = 7/140 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           I NP E C G+        ++  D+E S  ETE  + + R EDR LK+ LLRK+  ++ S
Sbjct: 203 ISNPEEKCEGIV-------SSEEDQENSAGETELAEIDPRAEDRELKNHLLRKYSGYLSS 255

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK E SKKKKKGKLPK++RQ LL WW  HYKWPYP+E++K+ LAESTGLDQKQINNWFIN
Sbjct: 256 LKKELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFIN 315

Query: 139 QRKRHWKPSENMHFAVMDNL 158
           QRKRHWKPSE+M F VMD L
Sbjct: 316 QRKRHWKPSEDMQFMVMDGL 335


>gi|363807946|ref|NP_001242710.1| uncharacterized protein LOC100805837 [Glycine max]
 gi|255642659|gb|ACU21614.1| unknown [Glycine max]
          Length = 350

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 83/132 (62%), Positives = 100/132 (75%), Gaps = 5/132 (3%)

Query: 29  LKFSNTKDGAASSDEEYSGAETEAQD----AEARDEDRHLKDKLLRKFGSHIGSLKLEFS 84
           L  S+T D A +   E +G+  E  D     + + EDR LK +LLRK+  ++GSLK EF 
Sbjct: 195 LTISST-DFACNEGAERNGSSEEDVDLHNMIDPQAEDRELKGQLLRKYSGYLGSLKQEFM 253

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           KK+KKGKLPKE+RQ LL+WW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHW
Sbjct: 254 KKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHW 313

Query: 145 KPSENMHFAVMD 156
           KPSE+M F VMD
Sbjct: 314 KPSEDMQFVVMD 325


>gi|54042995|gb|AAV28488.1| homeodomain protein ARBORKNOX1 [Populus tremula x Populus alba]
          Length = 361

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/138 (58%), Positives = 100/138 (72%), Gaps = 8/138 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           + +P  GC      +  D   SS+EE    +      + + ED+ LK +LLR++  ++GS
Sbjct: 207 VSSPISGC-----GDGNDRNVSSEEE---VDVNNNFIDPQAEDQELKGQLLRRYSGYLGS 258

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFIN
Sbjct: 259 LKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFIN 318

Query: 139 QRKRHWKPSENMHFAVMD 156
           QRKRHWKPSE+M F VMD
Sbjct: 319 QRKRHWKPSEDMQFVVMD 336


>gi|57116572|gb|AAW33774.1| STM1 protein [Streptocarpus rexii]
          Length = 358

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 100/135 (74%), Gaps = 7/135 (5%)

Query: 29  LKFSNTKDGAASSDE--EYSGAETEAQDA-----EARDEDRHLKDKLLRKFGSHIGSLKL 81
           L  S++ D  A  +   E +G+  E  D      + + EDR LK +LLR++  ++G+LK 
Sbjct: 199 LTLSHSSDSGACGEAVLERNGSSEEEFDVNNSFIDPQAEDRELKGQLLRRYSGYLGNLKQ 258

Query: 82  EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRK
Sbjct: 259 EFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRK 318

Query: 142 RHWKPSENMHFAVMD 156
           RHWKPSE+M F VMD
Sbjct: 319 RHWKPSEDMQFVVMD 333


>gi|7940290|gb|AAF70849.1|AC003113_16 F2401.9 [Arabidopsis thaliana]
          Length = 377

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 81/116 (69%), Positives = 91/116 (78%), Gaps = 2/116 (1%)

Query: 41  SDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTL 100
           S EE      E  D +A  EDR LK +LLRK+  ++GSLK EF KK+KKGKLPKE+RQ L
Sbjct: 237 SSEEEVDMNNEFVDPQA--EDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQL 294

Query: 101 LDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           LDWW+ HYKWPYP+E  KL LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 295 LDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 350


>gi|351723761|ref|NP_001238058.1| homeobox protein SBH1 [Glycine max]
 gi|1170312|sp|P46608.1|HSBH1_SOYBN RecName: Full=Homeobox protein SBH1
 gi|485406|gb|AAA20882.1| SBH1 [Glycine max]
          Length = 379

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 80/128 (62%), Positives = 99/128 (77%), Gaps = 4/128 (3%)

Query: 33  NTKDGAASSDEEYSGAETEAQD----AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKK 88
           ++ D A++   + +G+  E  D     + + EDR LK +LLRK+  ++GSLK EF KK+K
Sbjct: 227 SSSDFASNEGGDRNGSSEEDVDLHNMIDPQAEDRDLKGQLLRKYSGYLGSLKQEFMKKRK 286

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSE 148
           KGKLPKE+RQ LL+WWN HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE
Sbjct: 287 KGKLPKEARQQLLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSE 346

Query: 149 NMHFAVMD 156
           +M F VMD
Sbjct: 347 DMQFVVMD 354


>gi|19424064|gb|AAL87330.1| putative homeobox protein [Arabidopsis thaliana]
          Length = 326

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 94/125 (75%), Gaps = 5/125 (4%)

Query: 37  GAASSDEEYSGAETEAQD-----AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           G  + D   +G+  E  D      + + EDR LK +LLRK+  ++GSLK EF KK+KKGK
Sbjct: 175 GETAIDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGK 234

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LLDWW+ HYKWPYP+E  KL LAESTGLDQKQINNWFINQRKRHWKPSE+M 
Sbjct: 235 LPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 294

Query: 152 FAVMD 156
           F VMD
Sbjct: 295 FVVMD 299


>gi|55276120|gb|AAV49801.1| homeobox transcription factor KN2 [Populus trichocarpa x Populus
           deltoides]
          Length = 373

 Score =  145 bits (365), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 81/136 (59%), Positives = 99/136 (72%), Gaps = 8/136 (5%)

Query: 21  NPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLK 80
           +P  GC      +  D   SS+EE    +      + + ED+ LK +LLR++  ++GSLK
Sbjct: 221 SPISGC-----GDGNDRNVSSEEE---VDVNNNFIDPQAEDQELKGQLLRRYSGYLGSLK 272

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
            EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQR
Sbjct: 273 QEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQR 332

Query: 141 KRHWKPSENMHFAVMD 156
           KRHWKPSE+M F VMD
Sbjct: 333 KRHWKPSEDMQFVVMD 348


>gi|85543300|gb|ABC71530.1| KNOTTED1 homeodomain protein [Lithachne humilis]
          Length = 350

 Score =  145 bits (365), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 76/121 (62%), Positives = 94/121 (77%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK +LLRK+  ++ SLK E SKKKKKGKLPK++
Sbjct: 213 GSSEEDQEGSGGETELPEVDAHGVDQELKHQLLRKYSGYLSSLKQELSKKKKKGKLPKDA 272

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL+WW+ HYKWPYP+E  K+ LAESTGLD KQINNWFINQRKRHWKPS+ M F +MD
Sbjct: 273 RQQLLNWWDMHYKWPYPSETQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD 332

Query: 157 N 157
            
Sbjct: 333 G 333


>gi|3426304|gb|AAC32262.1| Knox class 1 protein [Pisum sativum]
 gi|3462612|gb|AAC33008.1| knotted1-like class I homeodomain protein [Pisum sativum]
          Length = 371

 Score =  144 bits (364), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 80/121 (66%), Positives = 94/121 (77%), Gaps = 2/121 (1%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           D   SS+E+         D +A  EDR LK +LLRK+  ++GSLK EF KK+KKGKLPKE
Sbjct: 228 DRNGSSEEDQVDLYNNMIDPQA--EDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 285

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LL+WW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M F VM
Sbjct: 286 ARQQLLEWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 345

Query: 156 D 156
           D
Sbjct: 346 D 346


>gi|118482378|gb|ABK93112.1| unknown [Populus trichocarpa]
          Length = 285

 Score =  144 bits (364), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 81/136 (59%), Positives = 99/136 (72%), Gaps = 8/136 (5%)

Query: 21  NPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLK 80
           +P  GC      +  D   SS+EE    +      + + ED+ LK +LLR++  ++GSLK
Sbjct: 133 SPISGC-----GDGNDRNVSSEEE---VDVNNNFIDPQAEDQELKGQLLRRYSGYLGSLK 184

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
            EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQR
Sbjct: 185 QEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQR 244

Query: 141 KRHWKPSENMHFAVMD 156
           KRHWKPSE+M F VMD
Sbjct: 245 KRHWKPSEDMQFVVMD 260


>gi|449440664|ref|XP_004138104.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
 gi|449477432|ref|XP_004155021.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
          Length = 308

 Score =  144 bits (364), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 90/119 (75%), Gaps = 1/119 (0%)

Query: 33  NTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           +T  G  S +E  S  +  A+   A ++D  LK++LLRK+G HI SLK EFSK KKK  L
Sbjct: 180 DTTRGYVSDNEAASEEDISARGEVAGNKDGELKERLLRKYGGHISSLKQEFSKTKKKEGL 239

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK-PSENM 150
           PKE++Q LL+WWN H +WPYPT+ DK++LAESTGL++KQ+N+WFIN RKRHWK PSENM
Sbjct: 240 PKEAKQILLNWWNFHSQWPYPTDTDKVELAESTGLNRKQLNSWFINHRKRHWKLPSENM 298


>gi|224115894|ref|XP_002317151.1| predicted protein [Populus trichocarpa]
 gi|222860216|gb|EEE97763.1| predicted protein [Populus trichocarpa]
          Length = 310

 Score =  144 bits (364), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 81/136 (59%), Positives = 99/136 (72%), Gaps = 8/136 (5%)

Query: 21  NPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLK 80
           +P  GC      +  D   SS+EE    +      + + ED+ LK +LLR++  ++GSLK
Sbjct: 158 SPISGC-----GDGNDRNVSSEEE---VDVNNNFIDPQAEDQELKGQLLRRYSGYLGSLK 209

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
            EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQR
Sbjct: 210 QEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQR 269

Query: 141 KRHWKPSENMHFAVMD 156
           KRHWKPSE+M F VMD
Sbjct: 270 KRHWKPSEDMQFVVMD 285


>gi|4099826|gb|AAD00691.1| homeobox transcription factor SKN1 [Picea mariana]
          Length = 433

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/128 (63%), Positives = 101/128 (78%), Gaps = 2/128 (1%)

Query: 34  TKDGAASSD-EEYSGAETEAQDAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           T+ G +S + E+ SG ET+ Q+ +    EDR LKD LLR++  ++ SLK EF KKKKKGK
Sbjct: 285 TEGGGSSEEVEDGSGGETDFQEVDHHAVEDRELKDHLLRRYSGYLSSLKQEFMKKKKKGK 344

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPK++RQ LLDWW+ H KWPYP+E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+MH
Sbjct: 345 LPKDARQKLLDWWSLHDKWPYPSETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMH 404

Query: 152 FAVMDNLS 159
           F VM++ S
Sbjct: 405 FMVMNSHS 412


>gi|62530887|gb|AAX85665.1| transcription factor DANDEKNOX1 [Taraxacum officinale]
          Length = 175

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/137 (58%), Positives = 96/137 (70%), Gaps = 8/137 (5%)

Query: 28  GLKFSNTKDGAASSDEEYSGAETEAQDAEARD--------EDRHLKDKLLRKFGSHIGSL 79
            + FS +  G      + +G+  E  D +  +        E+  LK +LLRK+  ++GSL
Sbjct: 38  AISFSPSDSGCGEGGMDRNGSSEEDLDVDVNNNNLVDPQAEESELKGQLLRKYSGYLGSL 97

Query: 80  KLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQ 139
           K EF KK+KKGKLPKE+RQ LLDWW  HYKWPYP+EA KL LAESTGLDQKQINNWFINQ
Sbjct: 98  KQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSEAQKLALAESTGLDQKQINNWFINQ 157

Query: 140 RKRHWKPSENMHFAVMD 156
           RKRHWKPSE+M F VMD
Sbjct: 158 RKRHWKPSEDMQFVVMD 174


>gi|18389212|gb|AAL67665.1| invaginata [Antirrhinum majus]
          Length = 351

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/116 (68%), Positives = 91/116 (78%), Gaps = 2/116 (1%)

Query: 41  SDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTL 100
           S EE    +    D +A  EDR LK +LLRK+  ++GSLK EF KK+KKGKLPKE+RQ L
Sbjct: 212 SSEEEIDVDNSLIDPQA--EDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQL 269

Query: 101 LDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           LDWW+ HYKWPYP+E+ KL LAE TGLDQKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 270 LDWWSRHYKWPYPSESQKLALAEQTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 325


>gi|162458085|ref|NP_001105436.1| homeotic protein knotted-1 [Zea mays]
 gi|123183|sp|P24345.1|KN1_MAIZE RecName: Full=Homeotic protein knotted-1
 gi|22351|emb|CAA43605.1| Kn1 [Zea mays]
 gi|30267712|gb|AAP21616.1| KNOTTED1 [Zea mays]
 gi|32351475|gb|AAP76321.1| homeobox transcription factor KNOTTED1 [Zea mays]
 gi|195624480|gb|ACG34070.1| homeobox protein OSH1 [Zea mays]
 gi|414872576|tpg|DAA51133.1| TPA: knotted1 [Zea mays]
 gi|227607|prf||1707304A Knotted-1 gene
          Length = 359

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 92/122 (75%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
            G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPKE
Sbjct: 215 SGSSEEDQEGSGGETELPEVDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKE 274

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LL WW+ HYKWPYP+E  K+ LAESTGLD KQINNWFINQRKRHWKPSE MH  +M
Sbjct: 275 ARQQLLSWWDQHYKWPYPSETQKVALAESTGLDLKQINNWFINQRKRHWKPSEEMHHLMM 334

Query: 156 DN 157
           D 
Sbjct: 335 DG 336


>gi|195642508|gb|ACG40722.1| homeobox protein OSH1 [Zea mays]
          Length = 359

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 92/122 (75%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
            G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPKE
Sbjct: 215 SGSSEEDQEGSGGETELPEVDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKE 274

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LL WW+ HYKWPYP+E  K+ LAESTGLD KQINNWFINQRKRHWKPSE MH  +M
Sbjct: 275 ARQQLLSWWDQHYKWPYPSETQKVALAESTGLDLKQINNWFINQRKRHWKPSEEMHHLMM 334

Query: 156 DN 157
           D 
Sbjct: 335 DG 336


>gi|414872575|tpg|DAA51132.1| TPA: knotted1 [Zea mays]
          Length = 343

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/121 (63%), Positives = 92/121 (76%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPKE+
Sbjct: 200 GSSEEDQEGSGGETELPEVDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEA 259

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW+ HYKWPYP+E  K+ LAESTGLD KQINNWFINQRKRHWKPSE MH  +MD
Sbjct: 260 RQQLLSWWDQHYKWPYPSETQKVALAESTGLDLKQINNWFINQRKRHWKPSEEMHHLMMD 319

Query: 157 N 157
            
Sbjct: 320 G 320


>gi|289655986|gb|ADD14041.1| class 1 KNOTTED-like transcription factor STM-like1 [Prunus
           persica]
          Length = 329

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 91/120 (75%), Gaps = 1/120 (0%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G + S EE      E+   + R EDR LK KLLRK+  ++GSLK EF KKKK GKLPKE+
Sbjct: 184 GRSGSPEEVDATMNESC-IDPRAEDRELKAKLLRKYTGYLGSLKQEFMKKKKNGKLPKEA 242

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           R  LLDWW+ HYKWPYP+EA KL LAESTGLD KQIN WFINQRKRHWKPSE++ FAVMD
Sbjct: 243 RHQLLDWWSRHYKWPYPSEAQKLALAESTGLDLKQINKWFINQRKRHWKPSEDIQFAVMD 302


>gi|285804237|gb|ADC35599.1| class I KNOX homeobox transcription factor STM-like 1 [Prunus
           persica]
          Length = 329

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 91/120 (75%), Gaps = 1/120 (0%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G + S EE      E+   + R EDR LK KLLRK+  ++GSLK EF KKKK GKLPKE+
Sbjct: 184 GRSGSPEEVDATMNESC-IDPRAEDRELKAKLLRKYTGYLGSLKQEFMKKKKNGKLPKEA 242

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           R  LLDWW+ HYKWPYP+EA KL LAESTGLD KQIN WFINQRKRHWKPSE++ FAVMD
Sbjct: 243 RHQLLDWWSRHYKWPYPSEAQKLALAESTGLDLKQINKWFINQRKRHWKPSEDIQFAVMD 302


>gi|255554765|ref|XP_002518420.1| homeobox protein knotted-1, putative [Ricinus communis]
 gi|223542265|gb|EEF43807.1| homeobox protein knotted-1, putative [Ricinus communis]
          Length = 353

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/126 (62%), Positives = 96/126 (76%), Gaps = 2/126 (1%)

Query: 33  NTKDGAASSDEEYSGAETEAQD--AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKG 90
           N+  G AS     S  E +  +   + + ED+ LK +LLR++  ++GSLK EF KK+KKG
Sbjct: 203 NSALGEASDRNGSSEEEVDVNNNFIDPQAEDQELKGQLLRRYSGYLGSLKQEFMKKRKKG 262

Query: 91  KLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENM 150
           KLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M
Sbjct: 263 KLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDM 322

Query: 151 HFAVMD 156
            F VMD
Sbjct: 323 QFVVMD 328


>gi|356535014|ref|XP_003536044.1| PREDICTED: homeobox protein knotted-1-like 1-like isoform 1
           [Glycine max]
          Length = 296

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/166 (51%), Positives = 112/166 (67%), Gaps = 9/166 (5%)

Query: 7   PFAAWLSFFFEFIINPSEGCTG-----LKFSNTKDGAASSDEEYSGAETEA----QDAEA 57
           PF     F        S  C G     L  +++ + A +S++E S  + EA    + +  
Sbjct: 127 PFNEATLFLCSIESQLSNLCKGTLTMPLDNNHSDEAAGTSEDELSWEKVEAVEGHESSGP 186

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R  D+ LK+ LLRK+G ++ SLK EF KK+KKGKLPK++R  L+DWWN HY+WPYPTE +
Sbjct: 187 RPGDQELKEMLLRKYGGYLSSLKKEFLKKRKKGKLPKDARMVLMDWWNTHYRWPYPTEEE 246

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLF 163
           K+QL+E TGLDQKQINNWFINQRKRHWKPSE+M FA+MD +SG  F
Sbjct: 247 KVQLSEMTGLDQKQINNWFINQRKRHWKPSEDMRFAIMDGVSGSGF 292


>gi|3046821|dbj|BAA25546.1| NTH15 [Nicotiana tabacum]
          Length = 342

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/138 (57%), Positives = 100/138 (72%), Gaps = 5/138 (3%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           + + SE    L  +  ++G++  + + +    + Q      ED+ LK +LLRK+  ++GS
Sbjct: 185 LTSSSESVAALGEAIDRNGSSEEEVDVNNGFIDPQA-----EDQELKGQLLRKYSGYLGS 239

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LK EF KK+KKGKLPKE+RQ LLDWW  HYKWPYP+E+ KL LAESTGLDQKQINNWFIN
Sbjct: 240 LKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKLALAESTGLDQKQINNWFIN 299

Query: 139 QRKRHWKPSENMHFAVMD 156
           QRKRHWKPSE+M F VMD
Sbjct: 300 QRKRHWKPSEDMQFVVMD 317


>gi|225444460|ref|XP_002271944.1| PREDICTED: homeobox protein SBH1-like [Vitis vinifera]
          Length = 361

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/129 (61%), Positives = 96/129 (74%), Gaps = 5/129 (3%)

Query: 33  NTKDGAASSDEEYSGAETEAQDA-----EARDEDRHLKDKLLRKFGSHIGSLKLEFSKKK 87
           ++ D A     + +G+  E  D      + + EDR LK +LLRK+  ++ SLK EF KK+
Sbjct: 207 SSSDSAGGEGLDRNGSSEEEVDVNNNFIDPQAEDRELKGQLLRKYSGYLSSLKQEFMKKR 266

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPS
Sbjct: 267 KKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPS 326

Query: 148 ENMHFAVMD 156
           E+M F VMD
Sbjct: 327 EDMQFVVMD 335


>gi|290796117|gb|ADD64788.1| SHOOT MERISTEMLESS [Brassica rapa]
          Length = 382

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 94/125 (75%), Gaps = 5/125 (4%)

Query: 37  GAASSDEEYSGAETEAQD-----AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           G A+ +   +G+  E  D      + + ED  LK +LLRK+  ++GSLK EF KK+KKGK
Sbjct: 231 GEAAIERNNNGSSEEEVDMNNEFVDPQAEDWELKGQLLRKYSGYLGSLKQEFMKKRKKGK 290

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LLDWW+ HYKWPYP+E  KL LAESTGLDQKQINNWFINQRKRHWKPSENM 
Sbjct: 291 LPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSENMQ 350

Query: 152 FAVMD 156
           F VMD
Sbjct: 351 FVVMD 355


>gi|297741767|emb|CBI32996.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/129 (61%), Positives = 96/129 (74%), Gaps = 5/129 (3%)

Query: 33  NTKDGAASSDEEYSGAETEAQDA-----EARDEDRHLKDKLLRKFGSHIGSLKLEFSKKK 87
           ++ D A     + +G+  E  D      + + EDR LK +LLRK+  ++ SLK EF KK+
Sbjct: 95  SSSDSAGGEGLDRNGSSEEEVDVNNNFIDPQAEDRELKGQLLRKYSGYLSSLKQEFMKKR 154

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPS
Sbjct: 155 KKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPS 214

Query: 148 ENMHFAVMD 156
           E+M F VMD
Sbjct: 215 EDMQFVVMD 223


>gi|356535016|ref|XP_003536045.1| PREDICTED: homeobox protein knotted-1-like 1-like isoform 2
           [Glycine max]
          Length = 293

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/134 (58%), Positives = 103/134 (76%), Gaps = 4/134 (2%)

Query: 34  TKDGAASSDEEYSGAETEA----QDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKK 89
           + + A +S++E S  + EA    + +  R  D+ LK+ LLRK+G ++ SLK EF KK+KK
Sbjct: 156 SDEAAGTSEDELSWEKVEAVEGHESSGPRPGDQELKEMLLRKYGGYLSSLKKEFLKKRKK 215

Query: 90  GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSEN 149
           GKLPK++R  L+DWWN HY+WPYPTE +K+QL+E TGLDQKQINNWFINQRKRHWKPSE+
Sbjct: 216 GKLPKDARMVLMDWWNTHYRWPYPTEEEKVQLSEMTGLDQKQINNWFINQRKRHWKPSED 275

Query: 150 MHFAVMDNLSGPLF 163
           M FA+MD +SG  F
Sbjct: 276 MRFAIMDGVSGSGF 289


>gi|28564574|dbj|BAC57683.1| KNOX class homeodomain protein [Oryza sativa Japonica Group]
          Length = 412

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/139 (56%), Positives = 99/139 (71%), Gaps = 10/139 (7%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D + SG E E  + + R ED+ LK +LL+K+  ++ SL+ EFSKKKKKGKLPKE+
Sbjct: 267 GSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEA 326

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F +M+
Sbjct: 327 RQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMME 386

Query: 157 N----------LSGPLFTD 165
                      + GP   D
Sbjct: 387 GFHPQNAAALYMDGPFMAD 405


>gi|4887608|dbj|BAA77817.1| HOS3 [Oryza sativa Japonica Group]
          Length = 355

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/139 (56%), Positives = 99/139 (71%), Gaps = 10/139 (7%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D + SG E E  + + R ED+ LK +LL+K+  ++ SL+ EFSKKKKKGKLPKE+
Sbjct: 210 GSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEA 269

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F +M+
Sbjct: 270 RQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMME 329

Query: 157 N----------LSGPLFTD 165
                      + GP   D
Sbjct: 330 GFPPQNAAALYMDGPFMAD 348


>gi|345649237|gb|AEO14149.1| KNAT1 protein [Eschscholzia californica subsp. californica]
          Length = 405

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/132 (63%), Positives = 102/132 (77%), Gaps = 3/132 (2%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E S  ETE  + + R EDR LK+ LL+K+  ++ SLK E SKKKKKGKLPK++
Sbjct: 261 GSSEEDQENSAGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKKELSKKKKKGKLPKDA 320

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL+WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 321 RQKLLNWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 380

Query: 157 NL---SGPLFTD 165
            L   SG L+ D
Sbjct: 381 GLHPPSGALYMD 392


>gi|2935575|gb|AAC32818.1| KNOX class homeodomain protein [Oryza sativa Indica Group]
          Length = 357

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/139 (56%), Positives = 99/139 (71%), Gaps = 10/139 (7%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D + SG E E  + + R ED+ LK +LL+K+  ++ SL+ EFSKKKKKGKLPKE+
Sbjct: 212 GSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEA 271

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F +M+
Sbjct: 272 RQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMME 331

Query: 157 N----------LSGPLFTD 165
                      + GP   D
Sbjct: 332 GFHPQNAAALYMDGPFMAD 350


>gi|115470439|ref|NP_001058818.1| Os07g0129700 [Oryza sativa Japonica Group]
 gi|75099746|sp|O80416.1|KNOSC_ORYSJ RecName: Full=Homeobox protein knotted-1-like 12; AltName:
           Full=Homeobox protein HOS3; AltName: Full=Homeobox
           protein OSH15; AltName: Full=Homeobox protein
           knotted-1-like 3; Short=Oskn3
 gi|221272020|sp|O65034.2|KNOSC_ORYSI RecName: Full=Homeobox protein knotted-1-like 12; AltName:
           Full=Homeobox protein HOS3; AltName: Full=Homeobox
           protein OSH15; AltName: Full=Homeobox protein
           knotted-1-like 3; Short=Oskn3
 gi|3327240|dbj|BAA31688.1| OSH15 [Oryza sativa Japonica Group]
 gi|34395067|dbj|BAC84729.1| homeobox gene [Oryza sativa Japonica Group]
 gi|113610354|dbj|BAF20732.1| Os07g0129700 [Oryza sativa Japonica Group]
 gi|218199032|gb|EEC81459.1| hypothetical protein OsI_24763 [Oryza sativa Indica Group]
 gi|222636372|gb|EEE66504.1| hypothetical protein OsJ_22961 [Oryza sativa Japonica Group]
 gi|284431778|gb|ADB84630.1| homeobox protein [Oryza sativa Japonica Group]
          Length = 355

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/139 (56%), Positives = 99/139 (71%), Gaps = 10/139 (7%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D + SG E E  + + R ED+ LK +LL+K+  ++ SL+ EFSKKKKKGKLPKE+
Sbjct: 210 GSSEDDMDPSGRENEPPEIDPRAEDKELKFQLLKKYSGYLSSLRQEFSKKKKKGKLPKEA 269

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F +M+
Sbjct: 270 RQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMME 329

Query: 157 N----------LSGPLFTD 165
                      + GP   D
Sbjct: 330 GFHPQNAAALYMDGPFMAD 348


>gi|33333531|gb|AAQ11882.1| knotted 1 [Hordeum vulgare]
          Length = 349

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/143 (57%), Positives = 101/143 (70%), Gaps = 3/143 (2%)

Query: 19  IINPSEGCTGLKFSNTK-DGAASS--DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSH 75
           I     G   L  +  K +G  SS  D + SG E E  + + R ED+ LK +LL+K+  +
Sbjct: 183 ITGGGHGSAPLSLAAGKYEGVGSSEDDMDASGRENEPPEIDPRAEDKDLKYQLLKKYSGY 242

Query: 76  IGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNW 135
           + SL+ EFSKKKKKGKLPKE+RQ LL WW  HYKWPYP+E +K+ LAESTGLDQKQINNW
Sbjct: 243 LSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNW 302

Query: 136 FINQRKRHWKPSENMHFAVMDNL 158
           FINQRKRHWKPSE+M F +M+  
Sbjct: 303 FINQRKRHWKPSEDMPFVMMEGF 325


>gi|55669501|gb|AAV54618.1| homeobox transcription factor KN1 [Pinus taeda]
          Length = 434

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/128 (63%), Positives = 101/128 (78%), Gaps = 2/128 (1%)

Query: 34  TKDGAASSD-EEYSGAETEAQDAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           T+ G +S + E+ SG ET+ Q+ +    EDR LK+ LLRK+  ++ SLK EF KKKKKGK
Sbjct: 286 TEGGGSSEEVEDGSGGETDFQEVDHHAVEDRELKNHLLRKYCGYLSSLKQEFMKKKKKGK 345

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPK++RQ LLDWW+ H KWPYP+E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+MH
Sbjct: 346 LPKDARQKLLDWWSLHDKWPYPSETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMH 405

Query: 152 FAVMDNLS 159
           F VM++ S
Sbjct: 406 FMVMNSHS 413


>gi|414872574|tpg|DAA51131.1| TPA: knotted1 [Zea mays]
          Length = 193

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 77/120 (64%), Positives = 92/120 (76%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPKE+
Sbjct: 50  GSSEEDQEGSGGETELPEVDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEA 109

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW+ HYKWPYP+E  K+ LAESTGLD KQINNWFINQRKRHWKPSE MH  +MD
Sbjct: 110 RQQLLSWWDQHYKWPYPSETQKVALAESTGLDLKQINNWFINQRKRHWKPSEEMHHLMMD 169


>gi|73918025|gb|AAZ93629.1| class 1 Knotted 1-like protein [Eschscholzia californica]
          Length = 227

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/129 (65%), Positives = 105/129 (81%), Gaps = 3/129 (2%)

Query: 31  FSNTK-DGAASSDE--EYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKK 87
           F++ K +GA SS+E  E S  ETE  + + R EDR LK+ LL+K+  ++ SLK E SKKK
Sbjct: 99  FTDEKCEGAGSSEEGQENSAGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKKELSKKK 158

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           KKGKLPK++RQ LL+WW +HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKP+
Sbjct: 159 KKGKLPKDARQKLLNWWESHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPA 218

Query: 148 ENMHFAVMD 156
           ENMHF+VMD
Sbjct: 219 ENMHFSVMD 227


>gi|242033115|ref|XP_002463952.1| hypothetical protein SORBIDRAFT_01g009480 [Sorghum bicolor]
 gi|241917806|gb|EER90950.1| hypothetical protein SORBIDRAFT_01g009480 [Sorghum bicolor]
          Length = 360

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/121 (62%), Positives = 91/121 (75%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +    D+ LK  LL+K+  ++ SLK E SKKKKKGKLPKE+
Sbjct: 218 GSSEEDQEGSGGETELPEVDVHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEA 277

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW+ HYKWPYP+E  K+ LAESTGLD KQINNWFINQRKRHWKPSE MH  +MD
Sbjct: 278 RQQLLSWWDLHYKWPYPSETQKVALAESTGLDLKQINNWFINQRKRHWKPSEEMHHLMMD 337

Query: 157 N 157
            
Sbjct: 338 G 338


>gi|242042882|ref|XP_002459312.1| hypothetical protein SORBIDRAFT_02g002200 [Sorghum bicolor]
 gi|241922689|gb|EER95833.1| hypothetical protein SORBIDRAFT_02g002200 [Sorghum bicolor]
          Length = 356

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/139 (56%), Positives = 99/139 (71%), Gaps = 10/139 (7%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D + SG E +  + + R ED+ LK +LL+K+  ++ SL+ EFSKKKKKGKLPKE+
Sbjct: 211 GSSEDDMDPSGRENDPPEIDPRAEDKELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEA 270

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F +M+
Sbjct: 271 RQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMME 330

Query: 157 N----------LSGPLFTD 165
                      + GP   D
Sbjct: 331 GFHPQNAAALYMDGPFMAD 349


>gi|194690304|gb|ACF79236.1| unknown [Zea mays]
          Length = 359

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 92/122 (75%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
            G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPKE
Sbjct: 215 SGSSEEDQEGSGGETELPEVDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKE 274

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LL WW+ HYKWPYP++  K+ LAESTGLD KQINNWFINQRKRHWKPSE MH  +M
Sbjct: 275 ARQQLLSWWDQHYKWPYPSKTQKVALAESTGLDLKQINNWFINQRKRHWKPSEEMHHLMM 334

Query: 156 DN 157
           D 
Sbjct: 335 DG 336


>gi|4098240|gb|AAD00251.1| knotted 2 protein [Solanum lycopersicum]
          Length = 354

 Score =  142 bits (358), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 79/121 (65%), Positives = 92/121 (76%), Gaps = 3/121 (2%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           D   SSDEE    +      + + EDR LK +LLRK+  ++GSLK EF KK+KKGKLPKE
Sbjct: 212 DRNGSSDEE---VDVNNSFIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 268

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ L+DWW  H KWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M F VM
Sbjct: 269 ARQQLVDWWLRHIKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 328

Query: 156 D 156
           D
Sbjct: 329 D 329


>gi|165855677|gb|ABY67934.1| shoot meristemless STM2 [Euphorbia esula]
          Length = 264

 Score =  142 bits (358), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/138 (58%), Positives = 98/138 (71%), Gaps = 8/138 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           + +P   C     +N ++G   S EE         D +A  ED  LK +LLRK+  H+ S
Sbjct: 110 VSSPHSACAE---ANDRNG---SSEEEVDVNNNFIDPQA--EDHELKGQLLRKYSGHLCS 161

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L+ EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ K+ LAESTGLDQKQINNWFIN
Sbjct: 162 LRQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKIALAESTGLDQKQINNWFIN 221

Query: 139 QRKRHWKPSENMHFAVMD 156
           QRKRHWKPSE+M F VMD
Sbjct: 222 QRKRHWKPSEDMQFVVMD 239


>gi|226508000|ref|NP_001149651.1| homeobox protein rough sheath 1 [Zea mays]
 gi|32351469|gb|AAP76320.1| homeobox transcription factor GNARLY1 [Zea mays]
 gi|195628960|gb|ACG36242.1| homeobox protein rough sheath 1 [Zea mays]
 gi|414592152|tpg|DAA42723.1| TPA: gnarley1 [Zea mays]
          Length = 360

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 78/128 (60%), Positives = 98/128 (76%), Gaps = 3/128 (2%)

Query: 34  TKDGAASS---DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKG 90
           + +GA SS   D + SG E E  + + R ED+ LK +LL+K+  ++ SL+ EFSKKKKKG
Sbjct: 206 SSEGAGSSEDDDMDPSGRENEPPEIDPRAEDKELKYQLLKKYSGYLSSLRQEFSKKKKKG 265

Query: 91  KLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENM 150
           KLPKE+RQ LL WW  HYKWPYP+E +K+ LAE+TGLDQKQINNWFINQRKRHWKPSE+M
Sbjct: 266 KLPKEARQKLLHWWELHYKWPYPSETEKIALAEATGLDQKQINNWFINQRKRHWKPSEDM 325

Query: 151 HFAVMDNL 158
            F +M+  
Sbjct: 326 PFVMMEGF 333


>gi|371767734|gb|AEX56222.1| knotted-like 1 protein [Dactylorhiza fuchsii]
          Length = 298

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 76/105 (72%), Positives = 84/105 (80%)

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           DR LK +LLRK+  ++GSLK EF KK+KKGKLPKE+RQ LLDWW  HYKWPYP+E+ KL 
Sbjct: 178 DRELKGQLLRKYSGYLGSLKQEFLKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKLT 237

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTD 165
           LAESTGLDQKQINNWFINQRKRHWKPSE M F VMD      F D
Sbjct: 238 LAESTGLDQKQINNWFINQRKRHWKPSEEMQFVVMDAAHPHYFMD 282


>gi|326525409|dbj|BAK07974.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 364

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 93/125 (74%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPKE+
Sbjct: 220 GSSEEDQEGSGGETELAEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEA 279

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKP++ M F +MD
Sbjct: 280 RQQLLSWWEMHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPTDEMQFVMMD 339

Query: 157 NLSGP 161
               P
Sbjct: 340 AYHPP 344


>gi|350535485|ref|NP_001233941.1| homeobox protein knotted-1-like LET6 [Solanum lycopersicum]
 gi|6016221|sp|O22299.1|LET6_SOLLC RecName: Full=Homeobox protein knotted-1-like LET6
 gi|2529701|gb|AAC49917.1| class I knotted-like homeodomain protein [Solanum lycopersicum]
          Length = 355

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 80/131 (61%), Positives = 95/131 (72%), Gaps = 3/131 (2%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           D   SSDEE    +      + + EDR LK +LLRK+  ++GSLK EF KK+KKGKLPKE
Sbjct: 213 DRNGSSDEE---VDVNNSFIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 269

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ L+DWW  H KWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M F VM
Sbjct: 270 ARQQLVDWWLRHIKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 329

Query: 156 DNLSGPLFTDD 166
           D      + D+
Sbjct: 330 DAAHPHYYMDN 340


>gi|117644098|emb|CAL49293.1| shoot meristemless ortholog 2 [Silene latifolia]
          Length = 276

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/97 (75%), Positives = 84/97 (86%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           EDR LK +LLRK+  ++GSL+ EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL
Sbjct: 144 EDRELKGQLLRKYSGYLGSLRQEFLKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKL 203

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAE TGLDQKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 204 ALAEETGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 240


>gi|2522484|gb|AAB81079.1| knotted class 1 homeodomain protein [Hordeum vulgare subsp.
           vulgare]
          Length = 364

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 93/125 (74%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPKE+
Sbjct: 220 GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEA 279

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKP++ M F +MD
Sbjct: 280 RQQLLSWWEMHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPTDEMQFVMMD 339

Query: 157 NLSGP 161
               P
Sbjct: 340 AYHPP 344


>gi|149389448|gb|ABR26247.1| transcription factor STM4 [Euphorbia esula]
          Length = 370

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 81/138 (58%), Positives = 98/138 (71%), Gaps = 8/138 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           + +P   C     +N ++G   S EE         D +A  ED  LK +LLRK+  H+ S
Sbjct: 215 VSSPHSACAE---ANDRNG---SSEEEVDVNNNFIDPQA--EDHELKGQLLRKYSGHLCS 266

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L+ EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ K+ LAESTGLDQKQINNWFIN
Sbjct: 267 LRQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKIALAESTGLDQKQINNWFIN 326

Query: 139 QRKRHWKPSENMHFAVMD 156
           QRKRHWKPSE+M F VMD
Sbjct: 327 QRKRHWKPSEDMQFVVMD 344


>gi|3024086|sp|Q43484.1|KNOX3_HORVU RecName: Full=Homeobox protein KNOX3; AltName: Full=Hooded protein
 gi|793847|emb|CAA58503.1| Knox3 [Hordeum vulgare]
          Length = 364

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 93/125 (74%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPKE+
Sbjct: 220 GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEA 279

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKP++ M F +MD
Sbjct: 280 RQQLLSWWEMHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPTDEMQFVMMD 339

Query: 157 NLSGP 161
               P
Sbjct: 340 AYHPP 344


>gi|57116574|gb|AAW33775.1| STM1 protein [Streptocarpus saxorum]
          Length = 353

 Score =  142 bits (357), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 85/157 (54%), Positives = 105/157 (66%), Gaps = 11/157 (7%)

Query: 7   PFAAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDE--EYSGAETEAQDA-----EARD 59
           PF   + FF  F          L  S++ D  A  +   E +G+  E  D      + + 
Sbjct: 176 PFKDAMLFFSRFECQ----FKALTLSHSADSGACDEAVLEQNGSSEEEFDVNNSFIDPQA 231

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           ED  LK +LLRK+  ++G+LK EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL
Sbjct: 232 EDHELKGQLLRKYSGYLGNLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKL 291

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGL+QKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 292 ALAESTGLEQKQINNWFINQRKRHWKPSEDMQFVVMD 328


>gi|540536|dbj|BAA03959.1| homeobox protein [Oryza sativa Japonica Group]
          Length = 361

 Score =  142 bits (357), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 75/121 (61%), Positives = 93/121 (76%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPK++
Sbjct: 216 GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDA 275

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL+WW  HYKWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKPS+ M F +MD
Sbjct: 276 RQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD 335

Query: 157 N 157
            
Sbjct: 336 G 336


>gi|85543292|gb|ABC71526.1| KNOTTED1 homeodomain protein [Panicum miliaceum]
          Length = 334

 Score =  142 bits (357), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 91/122 (74%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
            G++  D+E SG ETE  + +A   D+ LK  LL+ +  ++ SLK E SKKKKKGKLPKE
Sbjct: 207 SGSSEEDQEGSGGETELPEVDAHGVDQELKHHLLKMYSGYLSSLKQELSKKKKKGKLPKE 266

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LL WW+ HYKWPYP+E  K+ LAESTGLD KQINNWFINQRKRHWKPSE MH  +M
Sbjct: 267 ARQQLLGWWDLHYKWPYPSETQKVALAESTGLDLKQINNWFINQRKRHWKPSEEMHHLMM 326

Query: 156 DN 157
           D 
Sbjct: 327 DG 328


>gi|50872441|gb|AAT85041.1| knotted1-type homeobox protein [Oryza sativa Japonica Group]
 gi|108711298|gb|ABF99093.1| KNOX1 domain containing protein, expressed [Oryza sativa Japonica
           Group]
 gi|215741530|dbj|BAG98025.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 336

 Score =  141 bits (356), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 66/115 (57%), Positives = 82/115 (71%), Gaps = 2/115 (1%)

Query: 48  AETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAH 107
           A T + + E    D+ LK +LLRK+G  +G L+  FSK+ KKGKLPKE+RQ LL WW  H
Sbjct: 187 AGTGSSEEEQDPSDKQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELH 246

Query: 108 YKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSE--NMHFAVMDNLSG 160
           YKWPYP+E +K+ LA++TGLDQKQINNWFINQRKRHWKP+      F  M+   G
Sbjct: 247 YKWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRHWKPTPVAGTAFPTMEAAGG 301


>gi|351734506|ref|NP_001237352.1| KNT1 [Glycine max]
 gi|114150002|gb|ABI51619.1| KNT1 [Glycine max]
          Length = 362

 Score =  141 bits (356), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 78/133 (58%), Positives = 99/133 (74%), Gaps = 5/133 (3%)

Query: 29  LKFSNTKDGAASSDEEYSGAETEAQDAEA-----RDEDRHLKDKLLRKFGSHIGSLKLEF 83
           L  S++ D  A ++       +E  D +      + ED+ LK +LLRK+  ++GSLK EF
Sbjct: 205 LTISSSLDTTACNEAIDRNGPSEDVDVQTNIIDPQAEDQELKGQLLRKYRGYLGSLKQEF 264

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           +KK+KKGKLPKE+RQ LL+WW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRH
Sbjct: 265 TKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 324

Query: 144 WKPSENMHFAVMD 156
           WKPSE+M F V+D
Sbjct: 325 WKPSEDMQFVVVD 337


>gi|149389446|gb|ABR26246.1| transcription factor STM1 [Euphorbia esula]
          Length = 376

 Score =  141 bits (356), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 81/138 (58%), Positives = 98/138 (71%), Gaps = 8/138 (5%)

Query: 19  IINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGS 78
           + +P   C     +N ++G   S EE         D +A  ED  LK +LLRK+  H+ S
Sbjct: 221 VSSPHSACAE---ANDRNG---SSEEEVDVNNNFIDPQA--EDHELKGQLLRKYSGHLCS 272

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L+ EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ K+ LAESTGLDQKQINNWFIN
Sbjct: 273 LRKEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKIALAESTGLDQKQINNWFIN 332

Query: 139 QRKRHWKPSENMHFAVMD 156
           QRKRHWKPSE+M F VMD
Sbjct: 333 QRKRHWKPSEDMQFVVMD 350


>gi|340764130|gb|AEK69289.1| HIRZINA-like protein [Linaria vulgaris]
          Length = 367

 Score =  141 bits (356), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/136 (60%), Positives = 97/136 (71%), Gaps = 5/136 (3%)

Query: 21  NPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLK 80
           +PS   T    +  ++G   S EE         D +A  ED  LK +L RK+  ++GSLK
Sbjct: 207 HPSPAATARGEALYRNG---SSEEEIDVNNSMIDPQA--EDVELKGQLFRKYSGYLGSLK 261

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
            EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQR
Sbjct: 262 QEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQR 321

Query: 141 KRHWKPSENMHFAVMD 156
           KRHWKPSE+M F VMD
Sbjct: 322 KRHWKPSEDMQFVVMD 337


>gi|108885278|sp|P46609.2|KNOS6_ORYSJ RecName: Full=Homeobox protein knotted-1-like 6; AltName:
           Full=Homeobox protein OSH1; AltName: Full=Homeobox
           protein knotted-1-like 1; Short=Oskn1
 gi|478420|pir||JQ2379 homeobox 1 protein OSH1 - rice
 gi|41469276|gb|AAS07158.1| homeobox 1 protein OSH1 [Oryza sativa Japonica Group]
 gi|108710856|gb|ABF98651.1| Homeobox protein OSH1, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108710857|gb|ABF98652.1| Homeobox protein OSH1, putative, expressed [Oryza sativa Japonica
           Group]
 gi|284431774|gb|ADB84628.1| homeobox protein [Oryza sativa Japonica Group]
          Length = 361

 Score =  141 bits (356), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 75/121 (61%), Positives = 93/121 (76%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPK++
Sbjct: 216 GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDA 275

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL+WW  HYKWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKPS+ M F +MD
Sbjct: 276 RQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD 335

Query: 157 N 157
            
Sbjct: 336 G 336


>gi|371767736|gb|AEX56223.1| knotted-like 1 protein, partial [Dactylorhiza viridis]
          Length = 191

 Score =  141 bits (356), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 76/105 (72%), Positives = 84/105 (80%)

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           DR LK +LLRK+  ++GSLK EF KK+KKGKLPKE+RQ LLDWW  HYKWPYP+E+ KL 
Sbjct: 71  DRELKGQLLRKYSGYLGSLKQEFLKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKLA 130

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGPLFTD 165
           LAESTGLDQKQINNWFINQRKRHWKPSE M F VMD      F D
Sbjct: 131 LAESTGLDQKQINNWFINQRKRHWKPSEEMQFVVMDAAHPHYFMD 175


>gi|85543304|gb|ABC71532.1| KNOTTED1-like homeodomain protein [Pharus lappulaceus]
          Length = 336

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/121 (61%), Positives = 94/121 (77%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK +LL+K+  ++ +LK E SKKKKKGKLPK++
Sbjct: 197 GSSEEDQEGSGGETELPEIDAHGVDQELKHQLLKKYSGYLSTLKQELSKKKKKGKLPKDA 256

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL+WW  HYKWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKPS+ M F +MD
Sbjct: 257 RQQLLNWWELHYKWPYPSESQKMALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD 316

Query: 157 N 157
            
Sbjct: 317 G 317


>gi|326910891|gb|AEA11233.1| knotted-like homebox protein [Elaeis guineensis]
          Length = 318

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/167 (49%), Positives = 110/167 (65%), Gaps = 13/167 (7%)

Query: 7   PFAAWLSFFFEFIINPSEGCTGLKF----------SNTKDGAASSDEEYSGAE---TEAQ 53
           PF    SF     +  S  C G             S + +   SS+EE S  +   +E Q
Sbjct: 136 PFNEAASFLNSIEMQLSNLCKGRTTSSSTTGGTGNSPSDEMVGSSEEELSCGDVDASECQ 195

Query: 54  DAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYP 113
           ++ +R  D  LK+ LL+K+  ++ +L+ EF KK+KKGKLPK++R TLLDWW+ HY+WPYP
Sbjct: 196 ESGSRLADHELKEMLLKKYSGYLSNLRKEFLKKRKKGKLPKDARLTLLDWWHTHYRWPYP 255

Query: 114 TEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           TE +K +LAE TGLDQKQINNWFINQRKRHWKPSE+M FA+M+ +SG
Sbjct: 256 TEEEKAKLAEMTGLDQKQINNWFINQRKRHWKPSEDMRFALMEGVSG 302


>gi|6942300|gb|AAF32399.1|AF224499_1 KNOTTED-1-like homeobox protein b [Triticum aestivum]
 gi|6942302|gb|AAF32400.1|AF224500_1 KNOTTED-1-like homeobox protein d [Triticum aestivum]
 gi|57157675|dbj|BAD83802.1| KN1 homeobox protein [Triticum aestivum]
 gi|57157677|dbj|BAD83803.1| KN1 homeobox protein [Triticum aestivum]
          Length = 363

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 93/125 (74%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPK++
Sbjct: 219 GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDA 278

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKPS+ M F +MD
Sbjct: 279 RQQLLSWWEMHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD 338

Query: 157 NLSGP 161
               P
Sbjct: 339 AYHPP 343


>gi|6942297|gb|AAF32398.1|AF224498_1 KNOTTED-1-like homeobox protein a [Triticum aestivum]
 gi|57157673|dbj|BAD83801.1| KN1 homeobox protein [Triticum aestivum]
          Length = 362

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 93/125 (74%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPK++
Sbjct: 218 GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDA 277

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKPS+ M F +MD
Sbjct: 278 RQQLLSWWEMHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD 337

Query: 157 NLSGP 161
               P
Sbjct: 338 AYHPP 342


>gi|94982884|gb|ABF50222.1| knox-like protein [Solanum tuberosum]
          Length = 322

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/134 (56%), Positives = 102/134 (76%), Gaps = 2/134 (1%)

Query: 34  TKDGAASSDEEYSGAETEAQDAEA-RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           + +   +S+E+    E EA D+ A R+ D  LK+ L+RK+  ++ SL+ EF KK+KKGKL
Sbjct: 184 SDEAGGTSEEDLGCEEMEAADSPAYREGDNELKEMLMRKYSGYLSSLRKEFLKKRKKGKL 243

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHF 152
           PKE+R  LLDWWN HY+WPYPTE +K +L+E TGLDQKQINNWFINQRKRHW+PSE+M F
Sbjct: 244 PKEARIVLLDWWNTHYRWPYPTEEEKNRLSEMTGLDQKQINNWFINQRKRHWRPSEDMKF 303

Query: 153 AVMDNLS-GPLFTD 165
           A+M+ +S G ++ D
Sbjct: 304 ALMEGVSAGSMYFD 317


>gi|357115393|ref|XP_003559473.1| PREDICTED: homeobox protein KNOX3-like [Brachypodium distachyon]
          Length = 429

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 93/125 (74%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPK++
Sbjct: 285 GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDA 344

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKPS+ M F +MD
Sbjct: 345 RQQLLSWWEMHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD 404

Query: 157 NLSGP 161
               P
Sbjct: 405 GYHPP 409


>gi|18389214|gb|AAL67666.1| hirzina [Antirrhinum majus]
          Length = 353

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/97 (75%), Positives = 84/97 (86%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           ED  LK +LLRK+  ++GSLK EF KK+KKGKLPKE+RQ LL+WW+ HYKWPYP+E+ KL
Sbjct: 232 EDIELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKL 291

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 292 ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 328


>gi|20530672|gb|AAM27190.1|AF457121_1 knotted1-like homeodomain protein liguleless4a [Zea mays]
          Length = 151

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/129 (58%), Positives = 98/129 (75%), Gaps = 5/129 (3%)

Query: 37  GAASSDEEYSGAETEA-----QDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           G++  DE  SG +TEA     Q+  +R  DR LK+ LL+K+   +  L+ EF KK+KKGK
Sbjct: 5   GSSEEDEACSGGDTEATEPGQQEHSSRLADRELKEMLLKKYSGCLSRLRSEFLKKRKKGK 64

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPK++R  L+DWWN HY+WPYPTE DK++LA +TGLD KQINNWFINQRKRHWKPSE+M 
Sbjct: 65  LPKDARSALMDWWNTHYRWPYPTEEDKVRLAAATGLDPKQINNWFINQRKRHWKPSEDMR 124

Query: 152 FAVMDNLSG 160
           FA+M+ ++G
Sbjct: 125 FALMEGVTG 133


>gi|26023939|gb|AAN77691.1|AF483278_1 KNOTTED1-like homeodomain protein 3 [Picea abies]
          Length = 433

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/128 (62%), Positives = 100/128 (78%), Gaps = 2/128 (1%)

Query: 34  TKDGAASSD-EEYSGAETEAQDAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           T+ G +S + E+ SG ET+ Q+ +    EDR LKD LLR++  ++ SLK EF KKKKKGK
Sbjct: 285 TEGGGSSEEVEDGSGGETDFQEVDHHAVEDRELKDHLLRRYSGYLSSLKQEFMKKKKKGK 344

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPK++RQ LLDWW+ H KW YP+E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+MH
Sbjct: 345 LPKDARQKLLDWWSLHDKWSYPSETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMH 404

Query: 152 FAVMDNLS 159
           F VM++ S
Sbjct: 405 FMVMNSHS 412


>gi|55740695|gb|AAV63995.1| homeobox transcription factor KN3 [Pinus strobus]
 gi|55740697|gb|AAV63996.1| homeobox transcription factor KN3 [Picea glauca]
 gi|55740699|gb|AAV63997.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82908244|gb|ABB93311.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908246|gb|ABB93312.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908248|gb|ABB93313.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908250|gb|ABB93314.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908252|gb|ABB93315.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908254|gb|ABB93316.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908256|gb|ABB93317.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908258|gb|ABB93318.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908260|gb|ABB93319.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908262|gb|ABB93320.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908264|gb|ABB93321.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908266|gb|ABB93322.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908268|gb|ABB93323.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908270|gb|ABB93324.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908272|gb|ABB93325.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908274|gb|ABB93326.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908276|gb|ABB93327.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908278|gb|ABB93328.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908280|gb|ABB93329.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908282|gb|ABB93330.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908284|gb|ABB93331.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908286|gb|ABB93332.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908288|gb|ABB93333.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908290|gb|ABB93334.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908292|gb|ABB93335.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908294|gb|ABB93336.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908296|gb|ABB93337.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908298|gb|ABB93338.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908300|gb|ABB93339.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908302|gb|ABB93340.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908304|gb|ABB93341.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908306|gb|ABB93342.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908308|gb|ABB93343.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908310|gb|ABB93344.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908312|gb|ABB93345.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908314|gb|ABB93346.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908316|gb|ABB93347.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908318|gb|ABB93348.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908320|gb|ABB93349.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908322|gb|ABB93350.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908324|gb|ABB93351.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908326|gb|ABB93352.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908328|gb|ABB93353.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908330|gb|ABB93354.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908332|gb|ABB93355.1| homeobox transcription factor KN3 [Picea abies]
 gi|82908334|gb|ABB93356.1| homeobox transcription factor KN3 [Picea abies]
 gi|82909262|gb|ABB93801.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909264|gb|ABB93802.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909266|gb|ABB93803.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909268|gb|ABB93804.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909270|gb|ABB93805.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909272|gb|ABB93806.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909274|gb|ABB93807.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909276|gb|ABB93808.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909278|gb|ABB93809.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909280|gb|ABB93810.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909282|gb|ABB93811.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909284|gb|ABB93812.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909286|gb|ABB93813.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909288|gb|ABB93814.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909290|gb|ABB93815.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909292|gb|ABB93816.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909294|gb|ABB93817.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909296|gb|ABB93818.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909298|gb|ABB93819.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909300|gb|ABB93820.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909302|gb|ABB93821.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909304|gb|ABB93822.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909306|gb|ABB93823.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909308|gb|ABB93824.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909310|gb|ABB93825.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909312|gb|ABB93826.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909314|gb|ABB93827.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909316|gb|ABB93828.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909318|gb|ABB93829.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909320|gb|ABB93830.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909322|gb|ABB93831.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909324|gb|ABB93832.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909326|gb|ABB93833.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909328|gb|ABB93834.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909330|gb|ABB93835.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909332|gb|ABB93836.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909334|gb|ABB93837.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909336|gb|ABB93838.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909338|gb|ABB93839.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909340|gb|ABB93840.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909342|gb|ABB93841.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909344|gb|ABB93842.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909346|gb|ABB93843.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909348|gb|ABB93844.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909350|gb|ABB93845.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909352|gb|ABB93846.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909354|gb|ABB93847.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909356|gb|ABB93848.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909358|gb|ABB93849.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909360|gb|ABB93850.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909362|gb|ABB93851.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82909364|gb|ABB93852.1| homeobox transcription factor KN3 [Picea mariana]
 gi|82911510|gb|ABB94897.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911512|gb|ABB94898.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911514|gb|ABB94899.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911516|gb|ABB94900.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911518|gb|ABB94901.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911520|gb|ABB94902.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911522|gb|ABB94903.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911524|gb|ABB94904.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911526|gb|ABB94905.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911528|gb|ABB94906.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911530|gb|ABB94907.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911532|gb|ABB94908.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911534|gb|ABB94909.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911536|gb|ABB94910.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911538|gb|ABB94911.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911540|gb|ABB94912.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911542|gb|ABB94913.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911544|gb|ABB94914.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911546|gb|ABB94915.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911548|gb|ABB94916.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911550|gb|ABB94917.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911552|gb|ABB94918.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911554|gb|ABB94919.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911556|gb|ABB94920.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911558|gb|ABB94921.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911560|gb|ABB94922.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911562|gb|ABB94923.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911564|gb|ABB94924.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911566|gb|ABB94925.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911568|gb|ABB94926.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911570|gb|ABB94927.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911572|gb|ABB94928.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911574|gb|ABB94929.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911576|gb|ABB94930.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911578|gb|ABB94931.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911580|gb|ABB94932.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911582|gb|ABB94933.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911584|gb|ABB94934.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911586|gb|ABB94935.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911588|gb|ABB94936.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911590|gb|ABB94937.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911592|gb|ABB94938.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911594|gb|ABB94939.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911596|gb|ABB94940.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911598|gb|ABB94941.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911600|gb|ABB94942.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911602|gb|ABB94943.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911604|gb|ABB94944.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911606|gb|ABB94945.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911608|gb|ABB94946.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911610|gb|ABB94947.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911612|gb|ABB94948.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911614|gb|ABB94949.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911616|gb|ABB94950.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911618|gb|ABB94951.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911620|gb|ABB94952.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911622|gb|ABB94953.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911624|gb|ABB94954.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911626|gb|ABB94955.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911628|gb|ABB94956.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911630|gb|ABB94957.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911632|gb|ABB94958.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911634|gb|ABB94959.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911636|gb|ABB94960.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911638|gb|ABB94961.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911640|gb|ABB94962.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911642|gb|ABB94963.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911644|gb|ABB94964.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911646|gb|ABB94965.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911648|gb|ABB94966.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911650|gb|ABB94967.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911652|gb|ABB94968.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911654|gb|ABB94969.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911656|gb|ABB94970.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911658|gb|ABB94971.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911660|gb|ABB94972.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911662|gb|ABB94973.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911664|gb|ABB94974.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911666|gb|ABB94975.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911668|gb|ABB94976.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911670|gb|ABB94977.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911672|gb|ABB94978.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911674|gb|ABB94979.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911676|gb|ABB94980.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911678|gb|ABB94981.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911680|gb|ABB94982.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911682|gb|ABB94983.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911684|gb|ABB94984.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911686|gb|ABB94985.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911688|gb|ABB94986.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911690|gb|ABB94987.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911692|gb|ABB94988.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911694|gb|ABB94989.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911696|gb|ABB94990.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911698|gb|ABB94991.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911700|gb|ABB94992.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911702|gb|ABB94993.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911704|gb|ABB94994.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911706|gb|ABB94995.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911708|gb|ABB94996.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911710|gb|ABB94997.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911712|gb|ABB94998.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911714|gb|ABB94999.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911716|gb|ABB95000.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911718|gb|ABB95001.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911720|gb|ABB95002.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911722|gb|ABB95003.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911724|gb|ABB95004.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911726|gb|ABB95005.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911728|gb|ABB95006.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911730|gb|ABB95007.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911732|gb|ABB95008.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911734|gb|ABB95009.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911736|gb|ABB95010.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911738|gb|ABB95011.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911740|gb|ABB95012.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911742|gb|ABB95013.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911744|gb|ABB95014.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911746|gb|ABB95015.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911748|gb|ABB95016.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911750|gb|ABB95017.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911752|gb|ABB95018.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911754|gb|ABB95019.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911756|gb|ABB95020.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911758|gb|ABB95021.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911760|gb|ABB95022.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911762|gb|ABB95023.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911764|gb|ABB95024.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911766|gb|ABB95025.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911768|gb|ABB95026.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911770|gb|ABB95027.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911772|gb|ABB95028.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911774|gb|ABB95029.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911776|gb|ABB95030.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911778|gb|ABB95031.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911780|gb|ABB95032.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911782|gb|ABB95033.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911784|gb|ABB95034.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911786|gb|ABB95035.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911788|gb|ABB95036.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911790|gb|ABB95037.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911792|gb|ABB95038.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911794|gb|ABB95039.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911796|gb|ABB95040.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911798|gb|ABB95041.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911800|gb|ABB95042.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911802|gb|ABB95043.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911804|gb|ABB95044.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911806|gb|ABB95045.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911808|gb|ABB95046.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911810|gb|ABB95047.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911812|gb|ABB95048.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911814|gb|ABB95049.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911816|gb|ABB95050.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911818|gb|ABB95051.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911820|gb|ABB95052.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911822|gb|ABB95053.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911824|gb|ABB95054.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911826|gb|ABB95055.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911828|gb|ABB95056.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911830|gb|ABB95057.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911832|gb|ABB95058.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911834|gb|ABB95059.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911836|gb|ABB95060.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911838|gb|ABB95061.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911840|gb|ABB95062.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911842|gb|ABB95063.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911844|gb|ABB95064.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911846|gb|ABB95065.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911848|gb|ABB95066.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911850|gb|ABB95067.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911852|gb|ABB95068.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911854|gb|ABB95069.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911856|gb|ABB95070.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911858|gb|ABB95071.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911860|gb|ABB95072.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911862|gb|ABB95073.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911864|gb|ABB95074.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911866|gb|ABB95075.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911868|gb|ABB95076.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911870|gb|ABB95077.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911872|gb|ABB95078.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911874|gb|ABB95079.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911876|gb|ABB95080.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911878|gb|ABB95081.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911880|gb|ABB95082.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911882|gb|ABB95083.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911884|gb|ABB95084.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911886|gb|ABB95085.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911888|gb|ABB95086.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911890|gb|ABB95087.1| homeobox transcription factor KN3 [Picea glauca]
 gi|82911892|gb|ABB95088.1| homeobox transcription factor KN3 [Picea glauca]
          Length = 134

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/126 (64%), Positives = 93/126 (73%), Gaps = 9/126 (7%)

Query: 49  ETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHY 108
           E E  + +   EDR LKD+LLRK+  ++ SLK EF KKKKKGKLPKE+RQ LLDWW  +Y
Sbjct: 1   EVEFHEVDPHAEDRELKDQLLRKYSGYLSSLKQEFLKKKKKGKLPKEARQKLLDWWTRNY 60

Query: 109 KWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDN---------LS 159
           KWPYP+E+ K+ LAESTGLDQKQINNWFINQRKRHWKPSE M F VMD+         L 
Sbjct: 61  KWPYPSESQKIALAESTGLDQKQINNWFINQRKRHWKPSEEMQFVVMDSPNPHNAAFFLE 120

Query: 160 GPLFTD 165
           G L TD
Sbjct: 121 GHLRTD 126


>gi|108710858|gb|ABF98653.1| Homeobox protein OSH1, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 242

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/121 (61%), Positives = 93/121 (76%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPK++
Sbjct: 97  GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDA 156

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL+WW  HYKWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKPS+ M F +MD
Sbjct: 157 RQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD 216

Query: 157 N 157
            
Sbjct: 217 G 217


>gi|194688564|gb|ACF78366.1| unknown [Zea mays]
 gi|414883466|tpg|DAA59480.1| TPA: rough sheath1 [Zea mays]
          Length = 351

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/139 (55%), Positives = 99/139 (71%), Gaps = 10/139 (7%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D + +G E +  + + R ED+ LK +LL+K+  ++ SL+ EFSKKKKKGKLPKE+
Sbjct: 206 GSSEDDMDPNGRENDPPEIDPRAEDKELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEA 265

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F +M+
Sbjct: 266 RQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMME 325

Query: 157 N----------LSGPLFTD 165
                      + GP   D
Sbjct: 326 GFHPQNAAALYMDGPFMAD 344


>gi|55740691|gb|AAV63993.1| homeobox transcription factor KN2 [Pinus strobus]
          Length = 139

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 91/118 (77%), Gaps = 1/118 (0%)

Query: 43  EEYSGAETEAQDAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           E+ SG ET+ Q+ +    EDR LKD LLRK+  ++ SLK EF KKKKKGKLPK++RQ LL
Sbjct: 1   EDGSGGETDFQEVDHHAVEDRELKDHLLRKYSGYLSSLKQEFMKKKKKGKLPKDARQKLL 60

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           DWW  HYKWPYP+E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+M    MD  S
Sbjct: 61  DWWTVHYKWPYPSETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMQLMAMDGQS 118


>gi|55740687|gb|AAV63991.1| homeobox transcription factor KN1 [Pinus strobus]
          Length = 142

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 91/118 (77%), Gaps = 1/118 (0%)

Query: 43  EEYSGAETEAQDAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           E+ SG ET+ Q+ +    EDR LKD LLRK+  ++ SLK EF KKKKKGKLPK++RQ LL
Sbjct: 4   EDGSGGETDFQEVDHHAVEDRELKDHLLRKYSGYLSSLKQEFMKKKKKGKLPKDARQKLL 63

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           DWW  HYKWPYP+E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+M    MD  S
Sbjct: 64  DWWTVHYKWPYPSETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMQLMAMDGQS 121


>gi|297601619|ref|NP_001051139.2| Os03g0727000 [Oryza sativa Japonica Group]
 gi|255674861|dbj|BAF13053.2| Os03g0727000 [Oryza sativa Japonica Group]
          Length = 195

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/120 (62%), Positives = 93/120 (77%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPK++
Sbjct: 50  GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDA 109

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL+WW  HYKWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKPS+ M F +MD
Sbjct: 110 RQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMD 169


>gi|117644096|emb|CAL49292.1| putative shoot meristemless ortholog 1 [Silene latifolia]
          Length = 271

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/97 (74%), Positives = 83/97 (85%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           EDR LK +LLRK+  ++GSL+ EF KK+KKGKLPKE+RQ LLDWW  HYKWPYP+E+ K+
Sbjct: 140 EDRELKGQLLRKYSGYLGSLRQEFLKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKV 199

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAE TGLDQKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 200 ALAEETGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 236


>gi|22023962|gb|AAM89270.1|AF527947_1 homeodomain protein BOSTM-1 [Brassica oleracea]
          Length = 380

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/125 (63%), Positives = 95/125 (76%), Gaps = 7/125 (5%)

Query: 37  GAASSDEEYSGAETEAQD-----AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           G A+ +   +G+  E  D      + + EDR LK +LLRK+  ++GSLK EF KK+KKGK
Sbjct: 231 GEAAIERNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGK 290

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LLDWW+ HYKWPYP++  KL LAESTGLDQKQINNWFINQRKRHWKPSE+M 
Sbjct: 291 LPKEARQQLLDWWSRHYKWPYPSQ--KLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 348

Query: 152 FAVMD 156
           F VMD
Sbjct: 349 FVVMD 353


>gi|162461591|ref|NP_001105331.1| homeobox protein rough sheath 1 [Zea mays]
 gi|3024577|sp|Q41853.1|RSH1_MAIZE RecName: Full=Homeobox protein rough sheath 1
 gi|1008879|gb|AAA86287.1| RS1 [Zea mays]
          Length = 351

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 95/122 (77%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D + +G E +  + + R ED+ LK +LL+K+  ++ SL+ EFSKKKKKGKLPKE+
Sbjct: 206 GSSEDDMDPNGRENDPPEIDPRAEDKELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEA 265

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F +M+
Sbjct: 266 RQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMME 325

Query: 157 NL 158
             
Sbjct: 326 GF 327


>gi|82910000|gb|ABB94154.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910072|gb|ABB94190.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910088|gb|ABB94198.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910156|gb|ABB94232.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910260|gb|ABB94284.1| homeobox transcription factor KN1 [Picea glauca]
          Length = 140

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 95/118 (80%), Gaps = 1/118 (0%)

Query: 43  EEYSGAETEAQDAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           E+ SG ET+ Q+ +    EDR LKD LLR++  ++ SLK EF KKKKKGKLPK++RQ LL
Sbjct: 2   EDGSGGETDFQEVDRHAVEDRELKDHLLRRYSGYLSSLKQEFMKKKKKGKLPKDARQKLL 61

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           DWW+ H KWPYP+E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+MHF VM++ S
Sbjct: 62  DWWSLHDKWPYPSETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMHFMVMNSHS 119


>gi|82907876|gb|ABB93127.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907878|gb|ABB93128.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907880|gb|ABB93129.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907882|gb|ABB93130.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907884|gb|ABB93131.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907886|gb|ABB93132.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907888|gb|ABB93133.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907890|gb|ABB93134.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907892|gb|ABB93135.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907894|gb|ABB93136.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907896|gb|ABB93137.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907898|gb|ABB93138.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907900|gb|ABB93139.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907902|gb|ABB93140.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907904|gb|ABB93141.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907906|gb|ABB93142.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907908|gb|ABB93143.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907910|gb|ABB93144.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907912|gb|ABB93145.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907914|gb|ABB93146.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907916|gb|ABB93147.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907918|gb|ABB93148.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907920|gb|ABB93149.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907922|gb|ABB93150.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907924|gb|ABB93151.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907926|gb|ABB93152.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907928|gb|ABB93153.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907930|gb|ABB93154.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907932|gb|ABB93155.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907934|gb|ABB93156.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907936|gb|ABB93157.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907938|gb|ABB93158.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907940|gb|ABB93159.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907942|gb|ABB93160.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907944|gb|ABB93161.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907946|gb|ABB93162.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907948|gb|ABB93163.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907950|gb|ABB93164.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907952|gb|ABB93165.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907954|gb|ABB93166.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907956|gb|ABB93167.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907958|gb|ABB93168.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907960|gb|ABB93169.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907962|gb|ABB93170.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907964|gb|ABB93171.1| homeobox transcription factor KN1 [Picea abies]
 gi|82907966|gb|ABB93172.1| homeobox transcription factor KN1 [Picea abies]
 gi|82908846|gb|ABB93593.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908848|gb|ABB93594.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908850|gb|ABB93595.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908852|gb|ABB93596.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908854|gb|ABB93597.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908856|gb|ABB93598.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908858|gb|ABB93599.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908860|gb|ABB93600.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908862|gb|ABB93601.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908864|gb|ABB93602.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908866|gb|ABB93603.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908868|gb|ABB93604.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908870|gb|ABB93605.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908872|gb|ABB93606.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908874|gb|ABB93607.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908876|gb|ABB93608.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908878|gb|ABB93609.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908880|gb|ABB93610.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908882|gb|ABB93611.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908884|gb|ABB93612.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908886|gb|ABB93613.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908888|gb|ABB93614.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908890|gb|ABB93615.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908892|gb|ABB93616.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908894|gb|ABB93617.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908896|gb|ABB93618.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908898|gb|ABB93619.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908900|gb|ABB93620.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908902|gb|ABB93621.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908904|gb|ABB93622.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908906|gb|ABB93623.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908908|gb|ABB93624.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908910|gb|ABB93625.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908912|gb|ABB93626.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908914|gb|ABB93627.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908916|gb|ABB93628.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908918|gb|ABB93629.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908920|gb|ABB93630.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908922|gb|ABB93631.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908924|gb|ABB93632.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908926|gb|ABB93633.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908928|gb|ABB93634.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908930|gb|ABB93635.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908932|gb|ABB93636.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908934|gb|ABB93637.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908936|gb|ABB93638.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908938|gb|ABB93639.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908940|gb|ABB93640.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908942|gb|ABB93641.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908944|gb|ABB93642.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908946|gb|ABB93643.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82908948|gb|ABB93644.1| homeobox transcription factor KN1 [Picea mariana]
 gi|82909950|gb|ABB94129.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909952|gb|ABB94130.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909954|gb|ABB94131.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909956|gb|ABB94132.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909958|gb|ABB94133.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909960|gb|ABB94134.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909962|gb|ABB94135.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909964|gb|ABB94136.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909966|gb|ABB94137.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909968|gb|ABB94138.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909970|gb|ABB94139.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909972|gb|ABB94140.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909974|gb|ABB94141.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909976|gb|ABB94142.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909978|gb|ABB94143.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909980|gb|ABB94144.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909982|gb|ABB94145.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909984|gb|ABB94146.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909986|gb|ABB94147.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909988|gb|ABB94148.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909990|gb|ABB94149.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909992|gb|ABB94150.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909994|gb|ABB94151.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909996|gb|ABB94152.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82909998|gb|ABB94153.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910002|gb|ABB94155.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910004|gb|ABB94156.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910006|gb|ABB94157.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910008|gb|ABB94158.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910010|gb|ABB94159.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910012|gb|ABB94160.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910014|gb|ABB94161.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910018|gb|ABB94163.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910020|gb|ABB94164.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910022|gb|ABB94165.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910026|gb|ABB94167.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910028|gb|ABB94168.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910030|gb|ABB94169.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910032|gb|ABB94170.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910034|gb|ABB94171.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910036|gb|ABB94172.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910038|gb|ABB94173.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910040|gb|ABB94174.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910042|gb|ABB94175.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910044|gb|ABB94176.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910046|gb|ABB94177.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910048|gb|ABB94178.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910050|gb|ABB94179.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910052|gb|ABB94180.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910054|gb|ABB94181.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910056|gb|ABB94182.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910058|gb|ABB94183.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910060|gb|ABB94184.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910062|gb|ABB94185.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910064|gb|ABB94186.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910066|gb|ABB94187.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910068|gb|ABB94188.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910070|gb|ABB94189.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910074|gb|ABB94191.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910076|gb|ABB94192.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910078|gb|ABB94193.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910080|gb|ABB94194.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910082|gb|ABB94195.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910084|gb|ABB94196.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910086|gb|ABB94197.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910090|gb|ABB94199.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910092|gb|ABB94200.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910094|gb|ABB94201.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910096|gb|ABB94202.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910098|gb|ABB94203.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910100|gb|ABB94204.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910102|gb|ABB94205.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910104|gb|ABB94206.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910106|gb|ABB94207.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910108|gb|ABB94208.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910110|gb|ABB94209.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910112|gb|ABB94210.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910114|gb|ABB94211.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910116|gb|ABB94212.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910118|gb|ABB94213.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910120|gb|ABB94214.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910122|gb|ABB94215.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910124|gb|ABB94216.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910126|gb|ABB94217.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910128|gb|ABB94218.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910130|gb|ABB94219.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910132|gb|ABB94220.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910134|gb|ABB94221.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910136|gb|ABB94222.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910138|gb|ABB94223.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910140|gb|ABB94224.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910142|gb|ABB94225.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910144|gb|ABB94226.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910146|gb|ABB94227.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910148|gb|ABB94228.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910150|gb|ABB94229.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910152|gb|ABB94230.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910154|gb|ABB94231.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910158|gb|ABB94233.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910160|gb|ABB94234.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910162|gb|ABB94235.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910164|gb|ABB94236.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910166|gb|ABB94237.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910168|gb|ABB94238.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910170|gb|ABB94239.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910172|gb|ABB94240.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910174|gb|ABB94241.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910176|gb|ABB94242.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910178|gb|ABB94243.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910180|gb|ABB94244.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910182|gb|ABB94245.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910184|gb|ABB94246.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910186|gb|ABB94247.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910188|gb|ABB94248.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910190|gb|ABB94249.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910192|gb|ABB94250.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910194|gb|ABB94251.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910196|gb|ABB94252.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910198|gb|ABB94253.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910200|gb|ABB94254.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910202|gb|ABB94255.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910204|gb|ABB94256.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910206|gb|ABB94257.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910208|gb|ABB94258.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910210|gb|ABB94259.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910212|gb|ABB94260.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910214|gb|ABB94261.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910216|gb|ABB94262.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910218|gb|ABB94263.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910220|gb|ABB94264.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910222|gb|ABB94265.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910224|gb|ABB94266.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910226|gb|ABB94267.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910228|gb|ABB94268.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910230|gb|ABB94269.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910232|gb|ABB94270.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910234|gb|ABB94271.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910236|gb|ABB94272.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910238|gb|ABB94273.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910240|gb|ABB94274.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910242|gb|ABB94275.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910244|gb|ABB94276.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910246|gb|ABB94277.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910248|gb|ABB94278.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910250|gb|ABB94279.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910252|gb|ABB94280.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910254|gb|ABB94281.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910256|gb|ABB94282.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910258|gb|ABB94283.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910262|gb|ABB94285.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910264|gb|ABB94286.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910266|gb|ABB94287.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910268|gb|ABB94288.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910270|gb|ABB94289.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910272|gb|ABB94290.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910274|gb|ABB94291.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910276|gb|ABB94292.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910278|gb|ABB94293.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910280|gb|ABB94294.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910282|gb|ABB94295.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910284|gb|ABB94296.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910288|gb|ABB94298.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910290|gb|ABB94299.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910292|gb|ABB94300.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910294|gb|ABB94301.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910298|gb|ABB94303.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910300|gb|ABB94304.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910302|gb|ABB94305.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910304|gb|ABB94306.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910306|gb|ABB94307.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910308|gb|ABB94308.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910310|gb|ABB94309.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910312|gb|ABB94310.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910316|gb|ABB94312.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910318|gb|ABB94313.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910320|gb|ABB94314.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910322|gb|ABB94315.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910324|gb|ABB94316.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910326|gb|ABB94317.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910328|gb|ABB94318.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910330|gb|ABB94319.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910332|gb|ABB94320.1| homeobox transcription factor KN1 [Picea glauca]
          Length = 140

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 95/118 (80%), Gaps = 1/118 (0%)

Query: 43  EEYSGAETEAQDAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           E+ SG ET+ Q+ +    EDR LKD LLR++  ++ SLK EF KKKKKGKLPK++RQ LL
Sbjct: 2   EDGSGGETDFQEVDHHAVEDRELKDHLLRRYSGYLSSLKQEFMKKKKKGKLPKDARQKLL 61

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           DWW+ H KWPYP+E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+MHF VM++ S
Sbjct: 62  DWWSLHDKWPYPSETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMHFMVMNSHS 119


>gi|55740689|gb|AAV63992.1| homeobox transcription factor KN1 [Picea glauca]
          Length = 142

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 95/118 (80%), Gaps = 1/118 (0%)

Query: 43  EEYSGAETEAQDAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           E+ SG ET+ Q+ +    EDR LKD LLR++  ++ SLK EF KKKKKGKLPK++RQ LL
Sbjct: 4   EDGSGGETDFQEVDHHAVEDRELKDHLLRRYSGYLSSLKQEFMKKKKKGKLPKDARQKLL 63

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           DWW+ H KWPYP+E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+MHF VM++ S
Sbjct: 64  DWWSLHDKWPYPSETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMHFMVMNSHS 121


>gi|357131920|ref|XP_003567581.1| PREDICTED: homeobox protein knotted-1-like 1-like [Brachypodium
           distachyon]
          Length = 290

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/166 (48%), Positives = 106/166 (63%), Gaps = 9/166 (5%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-----LKFSNTKDGAASSDEEYSGAETEA----QD 54
           L  PF    SF        S  C+G        +++ +   SSD+E    ET+     Q+
Sbjct: 109 LSRPFDEAASFLSSIQTQLSNLCSGGSSPAATATHSDEMVGSSDDEQCSGETDGLDIGQE 168

Query: 55  AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPT 114
             +R  D  LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  L+DWWN HY+WPYPT
Sbjct: 169 HSSRIADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTALMDWWNTHYRWPYPT 228

Query: 115 EADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           E DK++LA  TGLD KQINNWFINQRKRHWKPSE+M FA+M+ ++G
Sbjct: 229 EEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVTG 274


>gi|165928771|gb|ABY74432.1| knotted-like homeobox protein [Kalanchoe x houghtonii]
          Length = 386

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/127 (61%), Positives = 96/127 (75%), Gaps = 2/127 (1%)

Query: 34  TKDGAASSDEEY-SGAETEA-QDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           + DG  SS+EE  +G ET+     + R EDR LK  L++K+  ++ SLK E SKK+KKGK
Sbjct: 233 SSDGVGSSEEEGDNGGETDQLPKIDPRAEDRELKLHLMKKYSGYLSSLKQELSKKRKKGK 292

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPKE+RQ LL WW  HYKWPYP+E +K+ LAESTGLD KQINNWFINQRKRHWKPSE++ 
Sbjct: 293 LPKEARQKLLAWWELHYKWPYPSETEKVALAESTGLDHKQINNWFINQRKRHWKPSEDIQ 352

Query: 152 FAVMDNL 158
           F VMD +
Sbjct: 353 FIVMDGM 359


>gi|11463941|dbj|BAB18584.1| CRKNOX2 [Ceratopteris richardii]
          Length = 430

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 72/101 (71%), Positives = 86/101 (85%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           ED+ LK++LLRK+  +I  LK EF KKKKKGKLP+E+RQ LLDWW  HYKWPYP+EA+K 
Sbjct: 286 EDQKLKEQLLRKYSGYIFKLKQEFLKKKKKGKLPREARQMLLDWWTQHYKWPYPSEAEKT 345

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
            LAESTGLDQKQINNWFINQRKRHWKPSE+M + +MD+ +G
Sbjct: 346 ALAESTGLDQKQINNWFINQRKRHWKPSEDMQYVMMDSPAG 386


>gi|82910016|gb|ABB94162.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910296|gb|ABB94302.1| homeobox transcription factor KN1 [Picea glauca]
 gi|82910314|gb|ABB94311.1| homeobox transcription factor KN1 [Picea glauca]
          Length = 140

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 95/118 (80%), Gaps = 1/118 (0%)

Query: 43  EEYSGAETEAQDAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           E+ SG ET+ Q+ +    EDR LKD LLR++  ++ SLK EF KKKKKGKLPK++RQ LL
Sbjct: 2   EDGSGGETDFQEVDHHAVEDRELKDHLLRRYSGYLSSLKQEFLKKKKKGKLPKDARQKLL 61

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           DWW+ H KWPYP+E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+MHF VM++ S
Sbjct: 62  DWWSLHDKWPYPSETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMHFMVMNSHS 119


>gi|242037977|ref|XP_002466383.1| hypothetical protein SORBIDRAFT_01g006790 [Sorghum bicolor]
 gi|241920237|gb|EER93381.1| hypothetical protein SORBIDRAFT_01g006790 [Sorghum bicolor]
          Length = 349

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 97/125 (77%), Gaps = 7/125 (5%)

Query: 40  SSDEEYSGAETEAQDAEARD------EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLP 93
           SS+ E +G+  + QDA   +      ED+ LK +LLRK+G ++G L+ EFSK+KKKGKLP
Sbjct: 195 SSNCEVAGSSEDEQDASCPEDIDPCAEDKELKHQLLRKYGGYLGGLRQEFSKRKKKGKLP 254

Query: 94  KESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP-SENMHF 152
           KE+RQ LL WW  HYKWPYP+E +K+ LAE+TGLDQKQINNWFINQRKRHWKP SE+M F
Sbjct: 255 KEARQKLLHWWELHYKWPYPSETEKMALAETTGLDQKQINNWFINQRKRHWKPASEDMPF 314

Query: 153 AVMDN 157
           A+M+ 
Sbjct: 315 AMMEG 319


>gi|58011285|gb|AAW62517.1| KNOTTED1-like protein [Selaginella kraussiana]
          Length = 460

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/146 (54%), Positives = 105/146 (71%), Gaps = 2/146 (1%)

Query: 6   LPFAAWLSFFFEFIINPS-EGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHL 64
           + F   L   F+ I N S    T ++  +  +   SS++E SGAE E  + +   +D+ L
Sbjct: 299 VAFCKKLDQQFQVITNGSASSVTSVESDDRNEAYDSSEDEDSGAEVEI-EVDPMAKDKEL 357

Query: 65  KDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAES 124
           K++L+RK+  +I SLK EF KKKKKGKLPK+SRQ LL+WW+ HYKWPYP+E++K  LAES
Sbjct: 358 KEQLMRKYSGYISSLKHEFLKKKKKGKLPKDSRQILLNWWSVHYKWPYPSESEKASLAES 417

Query: 125 TGLDQKQINNWFINQRKRHWKPSENM 150
           TGLDQKQINNWFINQRKRHWKPS+ +
Sbjct: 418 TGLDQKQINNWFINQRKRHWKPSDEL 443


>gi|85543296|gb|ABC71528.1| KNOTTED1 homeodomain protein [Setaria italica]
          Length = 344

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/131 (59%), Positives = 96/131 (73%), Gaps = 2/131 (1%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A  ED+ LK  LL+K+  ++ SLK E SKKKKKGKLPKE+
Sbjct: 206 GSSEEDQEGSGGETEIPEVDAHGEDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEA 265

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL W + HYKWPYP+E  K+ LAESTGLD KQI NWFINQRKRHWKPSE MH  +MD
Sbjct: 266 RQHLLSWRDLHYKWPYPSETQKVALAESTGLDLKQIINWFINQRKRHWKPSEEMHHLMMD 325

Query: 157 --NLSGPLFTD 165
             + +G  + D
Sbjct: 326 GYHTTGAFYMD 336


>gi|242089383|ref|XP_002440524.1| hypothetical protein SORBIDRAFT_09g002520 [Sorghum bicolor]
 gi|241945809|gb|EES18954.1| hypothetical protein SORBIDRAFT_09g002520 [Sorghum bicolor]
          Length = 303

 Score =  138 bits (348), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 81/159 (50%), Positives = 104/159 (65%), Gaps = 5/159 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEA----QDAEARD 59
           L  PF    SF        S  C G   S + +   SS++E    +TEA    Q+  +R 
Sbjct: 126 LSRPFDEAASFLSSVRTQLSSLCGGAA-SLSDEMVGSSEDEPCSGDTEATDLGQEHSSRL 184

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
            DR LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  L+DWWN HY+WPYPTE DK+
Sbjct: 185 ADRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKV 244

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
           +LA  TGLD KQINNWFINQRKRHWKPSE+M FA+M+ +
Sbjct: 245 RLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGV 283


>gi|371767724|gb|AEX56217.1| knotted-like 2 protein [Dactylorhiza fuchsii]
          Length = 327

 Score =  138 bits (348), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 65/130 (50%), Positives = 90/130 (69%), Gaps = 3/130 (2%)

Query: 34  TKDGAASSDEEYSGAE---TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKG 90
           + +   SSDE+ S  +   +E  D+ +R  +  LK+ L +K+  ++ SLK EF K  KKG
Sbjct: 180 SHEALGSSDEDPSYGDDDPSEIYDSSSRVPENELKEMLRKKYSGYLSSLKKEFLKTTKKG 239

Query: 91  KLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENM 150
           K+P+++R TLL WWN+HY+WPYPTE +K++L E T LDQKQINNWFINQRKRHW P E+ 
Sbjct: 240 KIPRDARSTLLVWWNSHYQWPYPTEEEKIKLVELTRLDQKQINNWFINQRKRHWNPPEDA 299

Query: 151 HFAVMDNLSG 160
             A ++ L G
Sbjct: 300 QLAFVEGLGG 309


>gi|82910024|gb|ABB94166.1| homeobox transcription factor KN1 [Picea glauca]
          Length = 140

 Score =  138 bits (348), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 94/118 (79%), Gaps = 1/118 (0%)

Query: 43  EEYSGAETEAQDAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           E+ SG ET+ Q+ +    EDR LKD LLR++  ++ SLK EF KKKKKGKLPK++RQ LL
Sbjct: 2   EDGSGGETDFQEVDHHAVEDRELKDHLLRRYSGYLSSLKQEFMKKKKKGKLPKDARQKLL 61

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           DWW+ H KWPYP+E +K+  AE TGLDQKQINNWFINQRKRHWKPSE+MHF VM++ S
Sbjct: 62  DWWSLHDKWPYPSETEKIAFAECTGLDQKQINNWFINQRKRHWKPSEDMHFMVMNSHS 119


>gi|31323451|gb|AAP47027.1|AF375968_1 knotted homeodomain protein 4, partial [Solanum lycopersicum]
          Length = 338

 Score =  138 bits (348), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 84/171 (49%), Positives = 110/171 (64%), Gaps = 12/171 (7%)

Query: 7   PFAAWLSFFFEFIINPSEGC-----TGLKFSN--TKDGAASSDEEYSGAETEAQDAEAR- 58
           PF    SF        S  C     T   F+N  + +   SSDE+    E EA D++   
Sbjct: 158 PFDEATSFLSNIESQLSSLCKDNLITSTSFNNYISDEAGGSSDEDLGCEEMEAADSQESP 217

Query: 59  ---DEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTE 115
              + D  LK+ L+RK+  ++ SL+ EF KK+KKGKLPKE+R  LLDWW  HY+WPYPTE
Sbjct: 218 ANCEGDNELKEMLMRKYSGYLSSLRKEFLKKRKKGKLPKEARIVLLDWWKNHYRWPYPTE 277

Query: 116 ADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS-GPLFTD 165
            +K +L+E TGLDQKQINNWFINQRKRHW+PSE+M FA+M+ +S G ++ D
Sbjct: 278 EEKNRLSEMTGLDQKQINNWFINQRKRHWRPSEDMKFALMEGVSAGSMYFD 328


>gi|28195122|gb|AAO33774.1| knotted protein TKN4 [Solanum lycopersicum]
          Length = 335

 Score =  138 bits (347), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/171 (49%), Positives = 110/171 (64%), Gaps = 12/171 (7%)

Query: 7   PFAAWLSFFFEFIINPSEGC-----TGLKFSN--TKDGAASSDEEYSGAETEAQDAEAR- 58
           PF    SF        S  C     T   F+N  + +   SSDE+    E EA D++   
Sbjct: 155 PFDEATSFLSNIESQLSSLCKDNLITSTSFNNYISDEAGGSSDEDLGCEEMEAADSQESP 214

Query: 59  ---DEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTE 115
              + D  LK+ L+RK+  ++ SL+ EF KK+KKGKLPKE+R  LLDWW  HY+WPYPTE
Sbjct: 215 ANCEGDNELKEMLMRKYSGYLSSLRKEFLKKRKKGKLPKEARIVLLDWWKNHYRWPYPTE 274

Query: 116 ADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS-GPLFTD 165
            +K +L+E TGLDQKQINNWFINQRKRHW+PSE+M FA+M+ +S G ++ D
Sbjct: 275 EEKNRLSEMTGLDQKQINNWFINQRKRHWRPSEDMKFALMEGVSAGSMYFD 325


>gi|115436138|ref|NP_001042827.1| Os01g0302500 [Oryza sativa Japonica Group]
 gi|75171952|sp|Q9FP29.1|KNOS1_ORYSJ RecName: Full=Homeobox protein knotted-1-like 1; AltName:
           Full=Homeobox protein HOS16; AltName: Full=Homeobox
           protein OSH6
 gi|11967917|dbj|BAB19772.1| putative knotted1-type homeobox protein [Oryza sativa Japonica
           Group]
 gi|21104563|dbj|BAB93157.1| knotted1-type homeobox protein OSH6 [Oryza sativa Japonica Group]
 gi|113532358|dbj|BAF04741.1| Os01g0302500 [Oryza sativa Japonica Group]
          Length = 301

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/167 (47%), Positives = 105/167 (62%), Gaps = 10/167 (5%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG------LKFSNTKDGAASSDEEYSGAETE----AQ 53
           L  PF    SF        S  C+G         +++ +   SSDE+    ET+     Q
Sbjct: 119 LSRPFDEAASFLSSIQTQLSNLCSGATSPPATTATHSDEMVGSSDEDQCSGETDMLDIGQ 178

Query: 54  DAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYP 113
           +  +R  D  LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  LL+WWN HY+WPYP
Sbjct: 179 EQSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYP 238

Query: 114 TEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           TE DKL+LA  TGLD KQINNWFINQRKRHWKPS+ M FA+M+ ++G
Sbjct: 239 TEEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGMRFALMEGVAG 285


>gi|218193821|gb|EEC76248.1| hypothetical protein OsI_13687 [Oryza sativa Indica Group]
          Length = 357

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/128 (53%), Positives = 89/128 (69%), Gaps = 5/128 (3%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           +G  SS+EE   +  EA+  E    D+ LK +LL K+G  +G L+ EFSK+ KKGKLPKE
Sbjct: 193 EGTGSSEEEQDTSCPEAE--EIDPSDKQLKHQLLMKYGGSLGDLRQEFSKRTKKGKLPKE 250

Query: 96  SRQTLLDWWNAHY-KWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS--ENMHF 152
           +R  LL WW  HY KWPYP+E +K+ LA++TGLDQKQI+NWFINQRKRHWKP+    M F
Sbjct: 251 ARLKLLHWWELHYDKWPYPSEMEKMTLAQTTGLDQKQISNWFINQRKRHWKPTPVAGMTF 310

Query: 153 AVMDNLSG 160
             ++   G
Sbjct: 311 PTVEAAGG 318


>gi|357441887|ref|XP_003591221.1| Homeobox transcription factor KN2 [Medicago truncatula]
 gi|355480269|gb|AES61472.1| Homeobox transcription factor KN2 [Medicago truncatula]
          Length = 268

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/140 (54%), Positives = 103/140 (73%), Gaps = 14/140 (10%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDE--------DRHLKDKLLRKFGSHIGSLKLEFSKKK 87
           + A +S++E S  + EA +    DE        D+ LK+ LLRK+G ++ +L+ EF KK+
Sbjct: 130 EAAGTSEDEMSCGKVEAVEG-GHDELCGTSCPGDKELKEMLLRKYGGYLSNLRQEFLKKR 188

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           KKGKLPK++R+ L+DWWN HY+WPYPTE +KLQL++ TGLD KQINNWFINQRKRHWKPS
Sbjct: 189 KKGKLPKDARKALMDWWNVHYRWPYPTEEEKLQLSDMTGLDIKQINNWFINQRKRHWKPS 248

Query: 148 ENMHFAVMDNLS-----GPL 162
           E+M F++M+ +S     GPL
Sbjct: 249 EDMRFSIMEGVSSTGIAGPL 268


>gi|357111616|ref|XP_003557608.1| PREDICTED: homeobox protein knotted-1-like 12-like [Brachypodium
           distachyon]
          Length = 350

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/122 (61%), Positives = 95/122 (77%), Gaps = 1/122 (0%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D + SG E +  + + R ED+ LK +LL+K+  ++ SL+ EFSKKKKKGKLPKE+
Sbjct: 206 GSSEDDMDVSGRE-DPPEIDPRAEDKELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEA 264

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F +M+
Sbjct: 265 RQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMME 324

Query: 157 NL 158
             
Sbjct: 325 GF 326


>gi|82910286|gb|ABB94297.1| homeobox transcription factor KN1 [Picea glauca]
          Length = 140

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 94/118 (79%), Gaps = 1/118 (0%)

Query: 43  EEYSGAETEAQDAEARD-EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           E+ SG ET+ Q+ +    EDR LKD LLR++  ++ SLK EF KKKKKGKLPK++RQ LL
Sbjct: 2   EDGSGGETDFQEVDHHAVEDRELKDHLLRRYSGYLSSLKQEFMKKKKKGKLPKDARQKLL 61

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
            WW+ H KWPYP+E +K+ LAE TGLDQKQINNWFINQRKRHWKPSE+MHF VM++ S
Sbjct: 62  GWWSLHDKWPYPSETEKIALAECTGLDQKQINNWFINQRKRHWKPSEDMHFMVMNSHS 119


>gi|356506913|ref|XP_003522218.1| PREDICTED: homeobox protein knotted-1-like 2-like isoform 1
           [Glycine max]
          Length = 361

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 97/122 (79%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
            ++  D++ SG ETE  + + + EDR LK  LL+K+  ++G+LK E SKKKKKGKLPK++
Sbjct: 217 SSSEEDKDNSGRETELIEIDPQAEDRELKSHLLKKYSGYLGTLKKELSKKKKKGKLPKDA 276

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E++K+ LAE+TGLDQKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 277 RQKLLSWWELHYKWPYPSESEKVALAEATGLDQKQINNWFINQRKRHWKPSEDMQFMVMD 336

Query: 157 NL 158
            L
Sbjct: 337 GL 338


>gi|356554470|ref|XP_003545569.1| PREDICTED: homeobox protein SBH1-like isoform 2 [Glycine max]
          Length = 330

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/155 (56%), Positives = 102/155 (65%), Gaps = 5/155 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQ--DAEARDED 61
           L  PF   + FF               F+  K   AS  E  S  E +    + +++ ED
Sbjct: 156 LTKPFKEAMLFFSRIECQLKALAVSSDFACNK---ASQSETSSQNEVDVHENNLDSQAED 212

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           R LK +LLRK+  ++GSLK EF KKKK GKLPKE+RQ LLDWWN HYKWPYP+E+ K  L
Sbjct: 213 RELKVQLLRKYSGYLGSLKKEFLKKKKNGKLPKEARQQLLDWWNRHYKWPYPSESQKQAL 272

Query: 122 AESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           AESTGLD KQINNWFINQRKRHWKPSE+M FAVMD
Sbjct: 273 AESTGLDLKQINNWFINQRKRHWKPSEDMQFAVMD 307


>gi|356506915|ref|XP_003522219.1| PREDICTED: homeobox protein knotted-1-like 2-like isoform 2
           [Glycine max]
          Length = 353

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 97/122 (79%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
            ++  D++ SG ETE  + + + EDR LK  LL+K+  ++G+LK E SKKKKKGKLPK++
Sbjct: 209 SSSEEDKDNSGRETELIEIDPQAEDRELKSHLLKKYSGYLGTLKKELSKKKKKGKLPKDA 268

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E++K+ LAE+TGLDQKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 269 RQKLLSWWELHYKWPYPSESEKVALAEATGLDQKQINNWFINQRKRHWKPSEDMQFMVMD 328

Query: 157 NL 158
            L
Sbjct: 329 GL 330


>gi|295149268|gb|ADF81047.1| KNOTTED-like homebox protein 2 [Cocos nucifera]
          Length = 317

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/163 (49%), Positives = 108/163 (66%), Gaps = 13/163 (7%)

Query: 7   PFAAWLSFFFEFIINPSEGCTGLKF----------SNTKDGAASSDEEYSGAE---TEAQ 53
           PF    SF     +  S  C G             S + +   SS+EE S  +   +E+Q
Sbjct: 132 PFDEAASFLNSIEVQLSNLCKGCTTSSSTTTATGNSPSDEVVGSSEEELSCGDVDASESQ 191

Query: 54  DAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYP 113
           ++ +R  D  LK+ LL+K+  ++ +L+ EF KK+KKGKLPK++R TLLDWW+AHY+WPYP
Sbjct: 192 ESGSRLADHELKEMLLKKYSGYLSNLRKEFLKKRKKGKLPKDARLTLLDWWHAHYRWPYP 251

Query: 114 TEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           TE +K +LAE TGLD KQINNWFINQRKRHWKPSE+M FA+M+
Sbjct: 252 TEEEKAKLAEMTGLDPKQINNWFINQRKRHWKPSEDMQFALME 294


>gi|226529576|ref|NP_001149876.1| KNOX1 domain containing protein [Zea mays]
 gi|195635197|gb|ACG37067.1| KNOX1 domain containing protein [Zea mays]
          Length = 360

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 91/122 (74%), Gaps = 3/122 (2%)

Query: 40  SSDEEYSGAETEAQDAEARD---EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           S DE+  G+  EA+ A   D   +D+ LK +LLRK+   +G+L+ E  KK+KK KLPKE+
Sbjct: 200 SDDEQEEGSGMEAEVALGIDPCSDDKELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEA 259

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HY+WPYP+E +K+ LAESTGL+QKQINNWFINQRKRHWKPSE M FAVMD
Sbjct: 260 RQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHWKPSEEMQFAVMD 319

Query: 157 NL 158
             
Sbjct: 320 GF 321


>gi|356554468|ref|XP_003545568.1| PREDICTED: homeobox protein SBH1-like isoform 1 [Glycine max]
          Length = 325

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/127 (64%), Positives = 97/127 (76%), Gaps = 10/127 (7%)

Query: 38  AASSDEEYSGAETEAQDA--------EARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKK 89
           A SSD  +  +ET +Q+         +++ EDR LK +LLRK+  ++GSLK EF KKKK 
Sbjct: 178 AVSSD--FGQSETSSQNEVDVHENNLDSQAEDRELKVQLLRKYSGYLGSLKKEFLKKKKN 235

Query: 90  GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSEN 149
           GKLPKE+RQ LLDWWN HYKWPYP+E+ K  LAESTGLD KQINNWFINQRKRHWKPSE+
Sbjct: 236 GKLPKEARQQLLDWWNRHYKWPYPSESQKQALAESTGLDLKQINNWFINQRKRHWKPSED 295

Query: 150 MHFAVMD 156
           M FAVMD
Sbjct: 296 MQFAVMD 302


>gi|224118100|ref|XP_002331558.1| predicted protein [Populus trichocarpa]
 gi|222873782|gb|EEF10913.1| predicted protein [Populus trichocarpa]
          Length = 369

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/121 (65%), Positives = 96/121 (79%), Gaps = 3/121 (2%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           D  ASS+EE    +   +  + + ED+ LK +LLRK+  ++GSLK EF KK+KKGKLPKE
Sbjct: 227 DRNASSEEEL---DVNNKFIDPQAEDQELKGQLLRKYSGYLGSLKKEFMKKRKKGKLPKE 283

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVM 155
           +RQ LLDWW+ H+KWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M F VM
Sbjct: 284 ARQQLLDWWSRHHKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 343

Query: 156 D 156
           D
Sbjct: 344 D 344


>gi|5103725|dbj|BAA79224.1| knotted1-type homeobox protein OSH6 [Oryza sativa]
          Length = 301

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/167 (47%), Positives = 104/167 (62%), Gaps = 10/167 (5%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG------LKFSNTKDGAASSDEEYSGAETE----AQ 53
           L  PF    SF        S  C+G         +++ +   SSDE+    ET+     Q
Sbjct: 119 LSRPFDEAASFLSSIQTQLSNLCSGATSPPATTATHSDEMVGSSDEDQCSGETDMLDIGQ 178

Query: 54  DAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYP 113
           +  +R  D  LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  LL+WWN HY+WPYP
Sbjct: 179 EQSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYP 238

Query: 114 TEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           TE DKL+LA  TGLD KQINNWFINQRKRHWKPS+ M FA M+ ++G
Sbjct: 239 TEEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGMRFAFMEGVAG 285


>gi|242033395|ref|XP_002464092.1| hypothetical protein SORBIDRAFT_01g012200 [Sorghum bicolor]
 gi|241917946|gb|EER91090.1| hypothetical protein SORBIDRAFT_01g012200 [Sorghum bicolor]
          Length = 334

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/129 (52%), Positives = 85/129 (65%), Gaps = 7/129 (5%)

Query: 35  KDGAASSDEE------YSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKK 88
           ++G  SSDE+        G    A+      ED+ LK +LL K+  ++ SL  E S+KKK
Sbjct: 168 EEGGGSSDEDEQETGDLGGLPVPAETGSPSGEDKELKSRLLNKYSGYLSSLWRELSRKKK 227

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS- 147
           KGKLP+++RQ LL WW  HY+WPYP+E +K  LAESTGLD KQINNWFINQRKRHWKP+ 
Sbjct: 228 KGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQINNWFINQRKRHWKPAP 287

Query: 148 ENMHFAVMD 156
             M  A  D
Sbjct: 288 PTMGLATGD 296


>gi|255542896|ref|XP_002512511.1| homeobox protein knotted-1, putative [Ricinus communis]
 gi|223548472|gb|EEF49963.1| homeobox protein knotted-1, putative [Ricinus communis]
          Length = 327

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/161 (48%), Positives = 107/161 (66%), Gaps = 8/161 (4%)

Query: 7   PFAAWLSFFFEFIINPSEGCTGLKFSN----TKDGAASSDEEYSGAETEAQDAE----AR 58
           PF    +FF +     S  C G         + +   +S+EE S  E EA ++     +R
Sbjct: 145 PFDEATTFFSDIESQLSNLCKGTLTKTFHYGSDEAVGTSEEEISCGEIEASESRESCGSR 204

Query: 59  DEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADK 118
             D  LK  LLRK+  ++ +L+ EF KK+KKGKLPK++R  LLDWWN HY+WPYPTE +K
Sbjct: 205 PVDPDLKGMLLRKYSGYLSNLRKEFLKKRKKGKLPKDARMILLDWWNNHYRWPYPTEDEK 264

Query: 119 LQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           ++L+E TGLDQKQINNWFINQRKRHWKPSE++ +A+M+ ++
Sbjct: 265 VKLSEITGLDQKQINNWFINQRKRHWKPSEDVRYALMEGVT 305


>gi|31745219|gb|AAP68879.1| putative knotted1-type homeobox protein [Oryza sativa Japonica
           Group]
          Length = 353

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 68/128 (53%), Positives = 88/128 (68%), Gaps = 5/128 (3%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           +G  SS+EE   +  EA+  E    D+ LK +LL K+G  +G L+  FSK+ KKGKLPKE
Sbjct: 189 EGTGSSEEEQDTSCPEAE--EIDPSDKQLKHQLLMKYGGSLGDLRQAFSKRTKKGKLPKE 246

Query: 96  SRQTLLDWWNAHY-KWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS--ENMHF 152
           +R  LL WW  HY KWPYP+E +K+ LA++TGLDQKQI+NWFINQRKRHWKP+    M F
Sbjct: 247 ARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQISNWFINQRKRHWKPTPVAGMTF 306

Query: 153 AVMDNLSG 160
             ++   G
Sbjct: 307 PTVEAAGG 314


>gi|194695204|gb|ACF81686.1| unknown [Zea mays]
 gi|408690268|gb|AFU81594.1| HB-type transcription factor, partial [Zea mays subsp. mays]
 gi|414873087|tpg|DAA51644.1| TPA: putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 364

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/162 (52%), Positives = 110/162 (67%), Gaps = 14/162 (8%)

Query: 8   FAAWLSFFFEFIINPSEGCTGLKFSNTKD---GAASSDE--EYSGAETEAQDA------E 56
           +   L  F E +  P +  T  +F N+ +   G+  SD   E +G+  + QDA      +
Sbjct: 173 YCNMLVKFHEEMARPIQEAT--EFFNSMERQLGSTISDSNCEVAGSSEDEQDASWPEEID 230

Query: 57  ARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEA 116
              ED+ LK +LLRK+G ++G L+ EFSK+KKKGKLPKE+RQ LL WW  HYKWPYP+E 
Sbjct: 231 PCAEDKELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSET 290

Query: 117 DKLQLAESTGLDQKQINNWFINQRKRHWKP-SENMHFAVMDN 157
           +K+ LAE+TGLD KQINNWFINQRKRHWKP SE+M FAVM+ 
Sbjct: 291 EKMALAETTGLDPKQINNWFINQRKRHWKPASEDMPFAVMEG 332


>gi|195627526|gb|ACG35593.1| homeotic protein knotted-1 [Zea mays]
          Length = 298

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/158 (51%), Positives = 102/158 (64%), Gaps = 4/158 (2%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSG---AETE-AQDAEARD 59
           L  PF    SF        S  C G    + +   +S DE  SG   A T+  Q+  +R 
Sbjct: 121 LSRPFDEAASFLSSVRTQLSSLCGGAASLSDEMVESSEDEPCSGDTDATTDPGQEHSSRL 180

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
            DR LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  L+DWWN HY+WPYPTE DK+
Sbjct: 181 ADRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKV 240

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDN 157
           +LA  TGLD KQINNWFINQRKRHWKPSE+M FA+M+ 
Sbjct: 241 RLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEG 278


>gi|162464096|ref|NP_001105085.1| knotted related homeobox5 [Zea mays]
 gi|30348865|gb|AAP31410.1|AF457119_1 knotted1-like homeodomain protein liguleless4b [Zea mays]
 gi|194708132|gb|ACF88150.1| unknown [Zea mays]
 gi|413942049|gb|AFW74698.1| putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 298

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/157 (51%), Positives = 102/157 (64%), Gaps = 4/157 (2%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSG---AETE-AQDAEARD 59
           L  PF    SF        S  C G    + +   +S DE  SG   A T+  Q+  +R 
Sbjct: 121 LSRPFDEAASFLSSVRTQLSSLCGGAASLSDEMVESSEDEPCSGDTDATTDPGQEHSSRL 180

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
            DR LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  L+DWWN HY+WPYPTE DK+
Sbjct: 181 ADRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKV 240

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           +LA  TGLD KQINNWFINQRKRHWKPSE+M FA+M+
Sbjct: 241 RLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALME 277


>gi|221272024|sp|Q10EC6.2|KNOS9_ORYSJ RecName: Full=Homeobox protein knotted-1-like 9
 gi|222625876|gb|EEE60008.1| hypothetical protein OsJ_12750 [Oryza sativa Japonica Group]
          Length = 347

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/128 (53%), Positives = 88/128 (68%), Gaps = 5/128 (3%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           +G  SS+EE   +  EA+  E    D+ LK +LL K+G  +G L+  FSK+ KKGKLPKE
Sbjct: 183 EGTGSSEEEQDTSCPEAE--EIDPSDKQLKHQLLMKYGGSLGDLRQAFSKRTKKGKLPKE 240

Query: 96  SRQTLLDWWNAHY-KWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSE--NMHF 152
           +R  LL WW  HY KWPYP+E +K+ LA++TGLDQKQI+NWFINQRKRHWKP+    M F
Sbjct: 241 ARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQISNWFINQRKRHWKPTPVAGMTF 300

Query: 153 AVMDNLSG 160
             ++   G
Sbjct: 301 PTVEAAGG 308


>gi|449508861|ref|XP_004163429.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
          Length = 346

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 70/97 (72%), Positives = 82/97 (84%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           E + LK +LLRK+  ++GSLK EF KKKK GKLPKE+RQ LLDWW+ HYKWPYP+E+ K+
Sbjct: 225 EVKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKV 284

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGLD KQINNWFINQRKRHWKP+E+M F VMD
Sbjct: 285 ALAESTGLDLKQINNWFINQRKRHWKPTEDMQFVVMD 321


>gi|449453537|ref|XP_004144513.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
          Length = 350

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 70/97 (72%), Positives = 82/97 (84%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           E + LK +LLRK+  ++GSLK EF KKKK GKLPKE+RQ LLDWW+ HYKWPYP+E+ K+
Sbjct: 225 EVKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKV 284

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGLD KQINNWFINQRKRHWKP+E+M F VMD
Sbjct: 285 ALAESTGLDLKQINNWFINQRKRHWKPTEDMQFVVMD 321


>gi|195638046|gb|ACG38491.1| homeobox protein rough sheath 1 [Zea mays]
          Length = 363

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/162 (51%), Positives = 110/162 (67%), Gaps = 14/162 (8%)

Query: 8   FAAWLSFFFEFIINPSEGCTGLKFSNTKD---GAASSDE--EYSGAETEAQDAEARDE-- 60
           +   L  F E +  P +  T  +F N+ +   G+  SD   E +G+  + QDA   +E  
Sbjct: 172 YCNMLVKFHEEMARPIQEAT--EFFNSMERQLGSTISDSNCEVAGSSEDEQDASCPEEID 229

Query: 61  ----DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEA 116
               D+ LK +LLRK+G ++G L+ EFSK+KKKGKLPKE+RQ LL WW  HYKWPYP+E 
Sbjct: 230 PCAEDKELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSET 289

Query: 117 DKLQLAESTGLDQKQINNWFINQRKRHWKP-SENMHFAVMDN 157
           +K+ LAE+TGLD KQINNWFINQRKRHWKP SE+M FA+M+ 
Sbjct: 290 EKMALAETTGLDPKQINNWFINQRKRHWKPASEDMPFAMMEG 331


>gi|345649243|gb|AEO14152.1| STM2 protein [Eschscholzia californica subsp. californica]
          Length = 385

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 71/102 (69%), Positives = 84/102 (82%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           EDR LK +LLRK+   +GSLK EF KK+KKGKLPKE+R+ LLDWW+ HYKWPYP+E+ K+
Sbjct: 258 EDRELKLQLLRKYSGCLGSLKQEFMKKRKKGKLPKEAREQLLDWWSRHYKWPYPSESQKM 317

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGP 161
            LAE+TGLDQKQINNWFINQRKRHWKPSE M F  +D  + P
Sbjct: 318 ALAETTGLDQKQINNWFINQRKRHWKPSEEMQFVELDGSNHP 359


>gi|3327275|dbj|BAA31701.1| PKn3 [Ipomoea nil]
          Length = 358

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 69/132 (52%), Positives = 100/132 (75%), Gaps = 5/132 (3%)

Query: 36  DGAASSDEEYSGAETEAQDAEAR-----DEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKG 90
           +   +S+E+ S  E E  +++       + D+ +K+ L+RK+  ++ SL+ EF KK+KKG
Sbjct: 210 EAGGTSEEDLSCGEVEVAESQEHLNNNSEGDQQIKEMLMRKYSGYLSSLRKEFLKKRKKG 269

Query: 91  KLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENM 150
           KLPK++R  LLDWWN+HY+WPY TE +K +L+E+TGLDQKQINNWFINQRKRHW+PSE+M
Sbjct: 270 KLPKDARVALLDWWNSHYRWPYTTEEEKNKLSEATGLDQKQINNWFINQRKRHWRPSEDM 329

Query: 151 HFAVMDNLSGPL 162
            FA+M+ +SG +
Sbjct: 330 RFALMEGVSGDV 341


>gi|55740693|gb|AAV63994.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82908060|gb|ABB93219.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908062|gb|ABB93220.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908064|gb|ABB93221.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908066|gb|ABB93222.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908068|gb|ABB93223.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908070|gb|ABB93224.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908072|gb|ABB93225.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908074|gb|ABB93226.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908076|gb|ABB93227.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908078|gb|ABB93228.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908080|gb|ABB93229.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908082|gb|ABB93230.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908086|gb|ABB93232.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908088|gb|ABB93233.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908090|gb|ABB93234.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908092|gb|ABB93235.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908094|gb|ABB93236.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908096|gb|ABB93237.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908098|gb|ABB93238.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908100|gb|ABB93239.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908102|gb|ABB93240.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908104|gb|ABB93241.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908106|gb|ABB93242.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908108|gb|ABB93243.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908110|gb|ABB93244.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908112|gb|ABB93245.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908114|gb|ABB93246.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908116|gb|ABB93247.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908118|gb|ABB93248.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908120|gb|ABB93249.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908122|gb|ABB93250.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908124|gb|ABB93251.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908126|gb|ABB93252.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908128|gb|ABB93253.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908130|gb|ABB93254.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908132|gb|ABB93255.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908134|gb|ABB93256.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908136|gb|ABB93257.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908138|gb|ABB93258.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908140|gb|ABB93259.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908144|gb|ABB93261.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908146|gb|ABB93262.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908148|gb|ABB93263.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908150|gb|ABB93264.1| homeobox transcription factor KN2 [Picea abies]
 gi|82909054|gb|ABB93697.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909056|gb|ABB93698.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909058|gb|ABB93699.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909060|gb|ABB93700.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909062|gb|ABB93701.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909064|gb|ABB93702.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909066|gb|ABB93703.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909068|gb|ABB93704.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909070|gb|ABB93705.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909072|gb|ABB93706.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909074|gb|ABB93707.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909076|gb|ABB93708.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909078|gb|ABB93709.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909080|gb|ABB93710.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909084|gb|ABB93712.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909086|gb|ABB93713.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909088|gb|ABB93714.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909090|gb|ABB93715.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909092|gb|ABB93716.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909094|gb|ABB93717.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909096|gb|ABB93718.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909098|gb|ABB93719.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909100|gb|ABB93720.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909102|gb|ABB93721.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909104|gb|ABB93722.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909106|gb|ABB93723.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909108|gb|ABB93724.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909110|gb|ABB93725.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909112|gb|ABB93726.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909114|gb|ABB93727.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909116|gb|ABB93728.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909118|gb|ABB93729.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909120|gb|ABB93730.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909122|gb|ABB93731.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909124|gb|ABB93732.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909126|gb|ABB93733.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909128|gb|ABB93734.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909130|gb|ABB93735.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909132|gb|ABB93736.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909134|gb|ABB93737.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909136|gb|ABB93738.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909138|gb|ABB93739.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909140|gb|ABB93740.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909142|gb|ABB93741.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909144|gb|ABB93742.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909146|gb|ABB93743.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909148|gb|ABB93744.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909152|gb|ABB93746.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909154|gb|ABB93747.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82909156|gb|ABB93748.1| homeobox transcription factor KN2 [Picea mariana]
 gi|82910730|gb|ABB94513.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910732|gb|ABB94514.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910734|gb|ABB94515.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910736|gb|ABB94516.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910738|gb|ABB94517.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910740|gb|ABB94518.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910742|gb|ABB94519.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910744|gb|ABB94520.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910746|gb|ABB94521.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910748|gb|ABB94522.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910750|gb|ABB94523.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910752|gb|ABB94524.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910754|gb|ABB94525.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910756|gb|ABB94526.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910758|gb|ABB94527.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910760|gb|ABB94528.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910762|gb|ABB94529.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910764|gb|ABB94530.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910766|gb|ABB94531.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910768|gb|ABB94532.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910770|gb|ABB94533.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910772|gb|ABB94534.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910774|gb|ABB94535.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910776|gb|ABB94536.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910778|gb|ABB94537.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910780|gb|ABB94538.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910782|gb|ABB94539.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910784|gb|ABB94540.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910786|gb|ABB94541.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910788|gb|ABB94542.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910790|gb|ABB94543.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910792|gb|ABB94544.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910794|gb|ABB94545.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910796|gb|ABB94546.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910798|gb|ABB94547.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910800|gb|ABB94548.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910802|gb|ABB94549.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910804|gb|ABB94550.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910806|gb|ABB94551.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910808|gb|ABB94552.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910810|gb|ABB94553.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910812|gb|ABB94554.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910814|gb|ABB94555.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910816|gb|ABB94556.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910818|gb|ABB94557.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910820|gb|ABB94558.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910822|gb|ABB94559.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910824|gb|ABB94560.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910826|gb|ABB94561.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910828|gb|ABB94562.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910830|gb|ABB94563.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910832|gb|ABB94564.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910834|gb|ABB94565.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910836|gb|ABB94566.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910838|gb|ABB94567.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910840|gb|ABB94568.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910842|gb|ABB94569.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910844|gb|ABB94570.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910846|gb|ABB94571.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910848|gb|ABB94572.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910850|gb|ABB94573.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910852|gb|ABB94574.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910854|gb|ABB94575.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910856|gb|ABB94576.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910858|gb|ABB94577.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910860|gb|ABB94578.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910862|gb|ABB94579.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910864|gb|ABB94580.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910866|gb|ABB94581.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910868|gb|ABB94582.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910870|gb|ABB94583.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910872|gb|ABB94584.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910874|gb|ABB94585.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910876|gb|ABB94586.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910878|gb|ABB94587.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910880|gb|ABB94588.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910882|gb|ABB94589.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910884|gb|ABB94590.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910886|gb|ABB94591.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910888|gb|ABB94592.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910890|gb|ABB94593.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910892|gb|ABB94594.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910894|gb|ABB94595.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910896|gb|ABB94596.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910898|gb|ABB94597.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910900|gb|ABB94598.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910902|gb|ABB94599.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910904|gb|ABB94600.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910906|gb|ABB94601.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910908|gb|ABB94602.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910910|gb|ABB94603.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910912|gb|ABB94604.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910914|gb|ABB94605.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910916|gb|ABB94606.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910918|gb|ABB94607.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910920|gb|ABB94608.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910922|gb|ABB94609.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910924|gb|ABB94610.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910926|gb|ABB94611.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910928|gb|ABB94612.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910930|gb|ABB94613.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910932|gb|ABB94614.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910934|gb|ABB94615.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910936|gb|ABB94616.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910938|gb|ABB94617.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910940|gb|ABB94618.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910942|gb|ABB94619.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910944|gb|ABB94620.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910946|gb|ABB94621.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910948|gb|ABB94622.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910950|gb|ABB94623.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910952|gb|ABB94624.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910954|gb|ABB94625.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910956|gb|ABB94626.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910958|gb|ABB94627.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910960|gb|ABB94628.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910962|gb|ABB94629.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910964|gb|ABB94630.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910966|gb|ABB94631.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910968|gb|ABB94632.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910970|gb|ABB94633.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910972|gb|ABB94634.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910974|gb|ABB94635.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910976|gb|ABB94636.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910978|gb|ABB94637.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910980|gb|ABB94638.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910982|gb|ABB94639.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910984|gb|ABB94640.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910986|gb|ABB94641.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910988|gb|ABB94642.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910990|gb|ABB94643.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910992|gb|ABB94644.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910994|gb|ABB94645.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910996|gb|ABB94646.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82910998|gb|ABB94647.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911000|gb|ABB94648.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911002|gb|ABB94649.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911004|gb|ABB94650.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911006|gb|ABB94651.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911008|gb|ABB94652.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911010|gb|ABB94653.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911012|gb|ABB94654.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911014|gb|ABB94655.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911016|gb|ABB94656.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911018|gb|ABB94657.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911020|gb|ABB94658.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911022|gb|ABB94659.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911024|gb|ABB94660.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911026|gb|ABB94661.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911028|gb|ABB94662.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911030|gb|ABB94663.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911032|gb|ABB94664.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911034|gb|ABB94665.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911036|gb|ABB94666.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911038|gb|ABB94667.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911040|gb|ABB94668.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911042|gb|ABB94669.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911044|gb|ABB94670.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911046|gb|ABB94671.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911048|gb|ABB94672.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911050|gb|ABB94673.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911052|gb|ABB94674.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911054|gb|ABB94675.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911056|gb|ABB94676.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911058|gb|ABB94677.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911060|gb|ABB94678.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911062|gb|ABB94679.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911064|gb|ABB94680.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911066|gb|ABB94681.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911068|gb|ABB94682.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911070|gb|ABB94683.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911072|gb|ABB94684.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911074|gb|ABB94685.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911076|gb|ABB94686.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911078|gb|ABB94687.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911080|gb|ABB94688.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911082|gb|ABB94689.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911084|gb|ABB94690.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911086|gb|ABB94691.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911088|gb|ABB94692.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911090|gb|ABB94693.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911092|gb|ABB94694.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911094|gb|ABB94695.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911096|gb|ABB94696.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911098|gb|ABB94697.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911100|gb|ABB94698.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911102|gb|ABB94699.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911104|gb|ABB94700.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911106|gb|ABB94701.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911108|gb|ABB94702.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911110|gb|ABB94703.1| homeobox transcription factor KN2 [Picea glauca]
 gi|82911112|gb|ABB94704.1| homeobox transcription factor KN2 [Picea glauca]
          Length = 131

 Score =  134 bits (338), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 72/100 (72%), Positives = 81/100 (81%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           EDR LKD LLRK+  ++ SLK EF KKKKKGKLPK++RQ LLDWW  HYKWPYP+E +K+
Sbjct: 11  EDRELKDHLLRKYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWTVHYKWPYPSETEKI 70

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
            LAE TGLDQKQINNWFINQRKRHWKPSE+M    MD  S
Sbjct: 71  ALAECTGLDQKQINNWFINQRKRHWKPSEDMQLMAMDGQS 110


>gi|82909150|gb|ABB93745.1| homeobox transcription factor KN2 [Picea mariana]
          Length = 131

 Score =  134 bits (338), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 72/100 (72%), Positives = 81/100 (81%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           EDR LKD LLRK+  ++ SLK EF KKKKKGKLPK++RQ LLDWW  HYKWPYP+E +K+
Sbjct: 11  EDRELKDHLLRKYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWTVHYKWPYPSETEKI 70

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
            LAE TGLDQKQINNWFINQRKRHWKPSE+M    MD  S
Sbjct: 71  ALAECTGLDQKQINNWFINQRKRHWKPSEDMQLMAMDGQS 110


>gi|300676309|gb|ADK26524.1| HERMIT-like protein 3 [Petunia x hybrida]
          Length = 331

 Score =  134 bits (338), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 70/129 (54%), Positives = 96/129 (74%), Gaps = 4/129 (3%)

Query: 36  DGAASSDEEYSGAETEAQDAEA----RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           +   +SDE+    E EA D +     R+ +  LK+ L+RK+  ++ SL+ +F KK+KKGK
Sbjct: 182 EAGGTSDEDICCGEMEATDGQESPANREGENELKEMLMRKYSGYLSSLRKDFLKKRKKGK 241

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPK++R  LLDWWN HY+WPYPTE +K +L+E TGLD KQINNWFINQRKRHW+PSE+M 
Sbjct: 242 LPKDARTALLDWWNTHYRWPYPTEEEKNRLSEITGLDPKQINNWFINQRKRHWRPSEDMK 301

Query: 152 FAVMDNLSG 160
           +A+M+ +SG
Sbjct: 302 YALMEGVSG 310


>gi|115461893|ref|NP_001054546.1| Os05g0129700 [Oryza sativa Japonica Group]
 gi|75139800|sp|Q7GDL5.1|KNOSA_ORYSJ RecName: Full=Homeobox protein knotted-1-like 10; AltName:
           Full=Homeobox protein HOS9; AltName: Full=Homeobox
           protein OSH71; AltName: Full=Homeobox protein
           knotted-1-like 2; Short=Oskn2
 gi|221272025|sp|A2Y007.2|KNOSA_ORYSI RecName: Full=Homeobox protein knotted-1-like 10; AltName:
           Full=Homeobox protein HOS9; AltName: Full=Homeobox
           protein OSH71; AltName: Full=Homeobox protein
           knotted-1-like 2; Short=Oskn2
 gi|2935573|gb|AAC32817.1| KNOX class homeodomain protein [Oryza sativa Indica Group]
 gi|4887610|dbj|BAA77818.1| HOS9 [Oryza sativa Japonica Group]
 gi|5103729|dbj|BAA79226.1| knotted1-type homeobox protein OSH71 [Oryza sativa]
 gi|51854371|gb|AAU10751.1| KNOX class homeodomain protein [Oryza sativa Japonica Group]
 gi|113578097|dbj|BAF16460.1| Os05g0129700 [Oryza sativa Japonica Group]
 gi|215767229|dbj|BAG99457.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218196023|gb|EEC78450.1| hypothetical protein OsI_18312 [Oryza sativa Indica Group]
          Length = 311

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/163 (47%), Positives = 104/163 (63%), Gaps = 6/163 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLK--FSNTKDGAASSDEEYSGAETEA----QDAEA 57
           L  PF    SF        +  C G      N+ +   SS++E    + +A    Q+  +
Sbjct: 132 LTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEMVGSSEDEPCSGDADAADFGQEHSS 191

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R  D  LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  L+DWWN HY+WPYPTE D
Sbjct: 192 RLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEED 251

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           K++LA  TGLD KQINNWFINQRKRHWKPSE+M FA+M+ ++G
Sbjct: 252 KVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVTG 294


>gi|85543294|gb|ABC71527.1| KNOTTED1 homeodomain protein [Cenchrus americanus]
          Length = 321

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 85/111 (76%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
            G++  D+E SG ETE  + +A   D+ LK  LLRK+  ++ SLK E SKKKKKGKLPKE
Sbjct: 211 SGSSEEDQEGSGGETEIPEIDAHGVDQELKHHLLRKYSGYLSSLKQELSKKKKKGKLPKE 270

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           +RQ LL WW AHYKWPYP+E  K+ LAESTGLD KQINNWFINQRKRHWKP
Sbjct: 271 ARQQLLGWWEAHYKWPYPSETQKVALAESTGLDLKQINNWFINQRKRHWKP 321


>gi|82908084|gb|ABB93231.1| homeobox transcription factor KN2 [Picea abies]
 gi|82908142|gb|ABB93260.1| homeobox transcription factor KN2 [Picea abies]
 gi|82909082|gb|ABB93711.1| homeobox transcription factor KN2 [Picea mariana]
          Length = 131

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/100 (72%), Positives = 81/100 (81%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           EDR LKD LLRK+  ++ SLK EF KKKKKGKLPK++RQ LLDWW  HYKWPYP+E +K+
Sbjct: 11  EDRELKDHLLRKYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWTLHYKWPYPSETEKI 70

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
            LAE TGLDQKQINNWFINQRKRHWKPSE+M    MD  S
Sbjct: 71  ALAECTGLDQKQINNWFINQRKRHWKPSEDMQLMAMDGQS 110


>gi|162459056|ref|NP_001105508.1| liguleless3 [Zea mays]
 gi|4240539|gb|AAD13611.1| knotted class 1 homeodomain protein liguleless3 [Zea mays]
 gi|323388555|gb|ADX60082.1| Homeobox HB transcription factor CDS [Zea mays]
 gi|414877207|tpg|DAA54338.1| TPA: liguleless3 [Zea mays]
          Length = 295

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/166 (46%), Positives = 106/166 (63%), Gaps = 9/166 (5%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-----LKFSNTKDGAASSDEEYSGAETEA----QD 54
           L  PF    SF        S+ C+G        +++ D   SS++E    +T+     Q+
Sbjct: 114 LTRPFDEAASFLSSIQAQLSDLCSGGSSPAATATHSDDMMGSSEDEQCSGDTDVPDMGQE 173

Query: 55  AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPT 114
             +   D  LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  LL+WWN HY+WPYPT
Sbjct: 174 HSSHLGDHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 233

Query: 115 EADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           E DK++LA  TGLD KQINNWFINQRKRHWKPSE+M FA+M+ ++G
Sbjct: 234 EEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVAG 279


>gi|195637536|gb|ACG38236.1| homeobox protein OSH1 [Zea mays]
          Length = 255

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/166 (46%), Positives = 106/166 (63%), Gaps = 9/166 (5%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-----LKFSNTKDGAASSDEEYSGAETEA----QD 54
           L  PF    SF        S+ C+G        +++ D   SS++E    +T+     Q+
Sbjct: 74  LTRPFDEAASFLSSIQAQLSDLCSGGSSPAATATHSDDMMGSSEDEQCSGDTDVPDMGQE 133

Query: 55  AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPT 114
             +   D  LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  LL+WWN HY+WPYPT
Sbjct: 134 HSSHLGDHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 193

Query: 115 EADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           E DK++LA  TGLD KQINNWFINQRKRHWKPSE+M FA+M+ ++G
Sbjct: 194 EEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVAG 239


>gi|242052735|ref|XP_002455513.1| hypothetical protein SORBIDRAFT_03g012480 [Sorghum bicolor]
 gi|241927488|gb|EES00633.1| hypothetical protein SORBIDRAFT_03g012480 [Sorghum bicolor]
          Length = 294

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/166 (46%), Positives = 105/166 (63%), Gaps = 9/166 (5%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-----LKFSNTKDGAASSDEEYSGAETEA----QD 54
           L  PF    SF        S  C+         +++ D   SS++E    +T+     Q+
Sbjct: 113 LSRPFDEAASFLSSIQAQLSNLCSAGSSPAATATHSDDMMGSSEDEQCSGDTDVPDIGQE 172

Query: 55  AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPT 114
             +R  D  LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  LL+WWN HY+WPYPT
Sbjct: 173 HSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 232

Query: 115 EADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           E DK++LA  TGLD KQINNWFINQRKRHWKPSE+M FA+M+ ++G
Sbjct: 233 EEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVAG 278


>gi|242033113|ref|XP_002463951.1| hypothetical protein SORBIDRAFT_01g009460 [Sorghum bicolor]
 gi|241917805|gb|EER90949.1| hypothetical protein SORBIDRAFT_01g009460 [Sorghum bicolor]
          Length = 372

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/138 (56%), Positives = 96/138 (69%), Gaps = 10/138 (7%)

Query: 23  SEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARD---EDRHLKDKLLRKFGSHIGSL 79
           +E  TGL  S+        D+E      EA+ A   D   +D+ LK +LLRK+   +G+L
Sbjct: 200 AEDNTGLDMSD-------DDQEEGSGGMEAEAALGIDPCSDDKELKKQLLRKYSGCLGNL 252

Query: 80  KLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQ 139
           + E  KK+KKGKLPKE+RQ LL WW  HY+WPYP+E +K+ LAESTGL+QKQINNWFINQ
Sbjct: 253 RKELCKKRKKGKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQ 312

Query: 140 RKRHWKPSENMHFAVMDN 157
           RKRHWKPSE M FAVMD 
Sbjct: 313 RKRHWKPSEEMQFAVMDG 330


>gi|33333544|gb|AAQ11888.1| knotted 1 [Nicotiana tabacum]
          Length = 327

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/131 (54%), Positives = 96/131 (73%), Gaps = 5/131 (3%)

Query: 34  TKDGAASSDEEYSGAETEAQDAEA-----RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKK 88
           + +   +SDE+    E EA D+       R+ D  LK+ L+RK+  ++ SL+ EF KK+K
Sbjct: 176 SDEAGGTSDEDLGCREMEAVDSTQESPANREGDNELKETLMRKYSGYLSSLRKEFLKKRK 235

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSE 148
           KGKLPK++R  LLDWWN HY+WPYPTE +K +L+E TGLD KQINNWFINQRKRHW+PSE
Sbjct: 236 KGKLPKDARTALLDWWNTHYRWPYPTEEEKNRLSEITGLDPKQINNWFINQRKRHWRPSE 295

Query: 149 NMHFAVMDNLS 159
           +M +A+M+ +S
Sbjct: 296 DMKYALMEGVS 306


>gi|336112107|gb|AEI17372.1| Knox-like protein 1 [Arabidopsis lyrata]
          Length = 388

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/149 (55%), Positives = 99/149 (66%), Gaps = 18/149 (12%)

Query: 16  FEFIINPSEGCTGLKFSNTKDGAASSDEEY---SGAETEAQDAEARDEDRHLKDKLLRKF 72
              + NP++G          +G  SSDEE    SG ETE  + + R EDR LK+ LL+K+
Sbjct: 234 IHILNNPADG--------KSEGMGSSDEEQENTSGGETELPEIDPRAEDRELKNHLLKKY 285

Query: 73  GSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
             ++ SLK E SKKKKKGKLPKE+RQ LL WW  H       E++K+ LAESTGLDQKQI
Sbjct: 286 SGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELH-------ESEKVALAESTGLDQKQI 338

Query: 133 NNWFINQRKRHWKPSENMHFAVMDNLSGP 161
           NNWFINQRKRHWKPSE+M F VMD L  P
Sbjct: 339 NNWFINQRKRHWKPSEDMQFMVMDGLQHP 367


>gi|125570067|gb|EAZ11582.1| hypothetical protein OsJ_01446 [Oryza sativa Japonica Group]
          Length = 144

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/127 (56%), Positives = 92/127 (72%), Gaps = 4/127 (3%)

Query: 38  AASSDEEYSGAETE----AQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLP 93
             SSDE+    ET+     Q+  +R  D  LK+ LL+K+   +  L+ EF KK+KKGKLP
Sbjct: 2   VGSSDEDQCSGETDMLDIGQEQSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLP 61

Query: 94  KESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFA 153
           K++R  LL+WWN HY+WPYPTE DKL+LA  TGLD KQINNWFINQRKRHWKPS+ M FA
Sbjct: 62  KDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGMRFA 121

Query: 154 VMDNLSG 160
           +M+ ++G
Sbjct: 122 LMEGVAG 128


>gi|4589449|dbj|BAA76750.1| KN1-type homeobox protein [Nicotiana tabacum]
          Length = 327

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/131 (53%), Positives = 96/131 (73%), Gaps = 5/131 (3%)

Query: 34  TKDGAASSDEEYSGAETEAQDAEA-----RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKK 88
           + +   +SDE+    E EA D+       R+ D  LK+ L+RK+  ++ SL+ EF KK+K
Sbjct: 176 SDEAGGTSDEDLCCGEMEAADSTQESPANREGDNELKETLMRKYSGYLSSLRKEFLKKRK 235

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSE 148
           KGKLPK++R  LL+WWN HY+WPYPTE +K +L+E TGLD KQINNWFINQRKRHW+PSE
Sbjct: 236 KGKLPKDARTALLEWWNTHYRWPYPTEEEKNRLSEITGLDPKQINNWFINQRKRHWRPSE 295

Query: 149 NMHFAVMDNLS 159
           +M +A+M+ +S
Sbjct: 296 DMKYALMEGVS 306


>gi|222630076|gb|EEE62208.1| hypothetical protein OsJ_16995 [Oryza sativa Japonica Group]
          Length = 263

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 5/159 (3%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTGLK--FSNTKDGAASSDEEYSGAETEAQDAEARDED 61
           L  PF    SF        +  C G      N++D   S D +   A    Q+  +R  D
Sbjct: 91  LTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSEDEPCSGDAD---AADFGQEHSSRLAD 147

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
             LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  L+DWWN HY+WPYPTE DK++L
Sbjct: 148 HELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRL 207

Query: 122 AESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           A  TGLD KQINNWFINQRKRHWKPSE+M FA+M+ ++G
Sbjct: 208 AAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVTG 246


>gi|218193686|gb|EEC76113.1| hypothetical protein OsI_13376 [Oryza sativa Indica Group]
          Length = 347

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/99 (67%), Positives = 82/99 (82%)

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WPYP+E +
Sbjct: 204 RSDDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPYPSEME 263

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           K+ LAESTGL+QKQINNWFINQRKRHWKP+E M FAVM+
Sbjct: 264 KIALAESTGLEQKQINNWFINQRKRHWKPTEEMQFAVME 302


>gi|357493287|ref|XP_003616932.1| Homeobox protein [Medicago truncatula]
 gi|132424661|gb|ABO33483.1| class I KNOX homeobox transcription factor [Medicago truncatula]
 gi|355518267|gb|AES99890.1| Homeobox protein [Medicago truncatula]
          Length = 312

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/133 (60%), Positives = 97/133 (72%), Gaps = 8/133 (6%)

Query: 32  SNTKDGAASSD---EEYSGAETEAQDAE-----ARDEDRHLKDKLLRKFGSHIGSLKLEF 83
           S  K  A S+D    E++ ++ E    E      + ED+ LK +LLRK+  ++GSLK EF
Sbjct: 157 SQLKAVAVSTDFGQSEFAASQNEIDVHENNLDTTQGEDQELKVQLLRKYSGYLGSLKKEF 216

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
            KKKK GKLPKE+RQ LLDWW+ HYKWPYP+E+ K  LAESTGLD KQINNWFINQRKRH
Sbjct: 217 LKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKQALAESTGLDLKQINNWFINQRKRH 276

Query: 144 WKPSENMHFAVMD 156
           WKPSE+M FAVMD
Sbjct: 277 WKPSEDMQFAVMD 289


>gi|290782316|gb|ADD62366.1| KNOX6 variant a [Medicago truncatula]
          Length = 298

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/133 (60%), Positives = 97/133 (72%), Gaps = 8/133 (6%)

Query: 32  SNTKDGAASSD---EEYSGAETEAQDAE-----ARDEDRHLKDKLLRKFGSHIGSLKLEF 83
           S  K  A S+D    E++ ++ E    E      + ED+ LK +LLRK+  ++GSLK EF
Sbjct: 143 SQLKAVAVSTDFGQSEFAASQNEIDVHENNLDTTQGEDQELKVQLLRKYSGYLGSLKKEF 202

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
            KKKK GKLPKE+RQ LLDWW+ HYKWPYP+E+ K  LAESTGLD KQINNWFINQRKRH
Sbjct: 203 LKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKQALAESTGLDLKQINNWFINQRKRH 262

Query: 144 WKPSENMHFAVMD 156
           WKPSE+M FAVMD
Sbjct: 263 WKPSEDMQFAVMD 275


>gi|290782318|gb|ADD62367.1| KNOX6 variant b [Medicago truncatula]
          Length = 186

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/133 (60%), Positives = 97/133 (72%), Gaps = 8/133 (6%)

Query: 32  SNTKDGAASSD---EEYSGAETEAQDAE-----ARDEDRHLKDKLLRKFGSHIGSLKLEF 83
           S  K  A S+D    E++ ++ E    E      + ED+ LK +LLRK+  ++GSLK EF
Sbjct: 31  SQLKAVAVSTDFGQSEFAASQNEIDVHENNLDTTQGEDQELKVQLLRKYSGYLGSLKKEF 90

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
            KKKK GKLPKE+RQ LLDWW+ HYKWPYP+E+ K  LAESTGLD KQINNWFINQRKRH
Sbjct: 91  LKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKQALAESTGLDLKQINNWFINQRKRH 150

Query: 144 WKPSENMHFAVMD 156
           WKPSE+M FAVMD
Sbjct: 151 WKPSEDMQFAVMD 163


>gi|211926930|dbj|BAG82674.1| KN1-type homeobox transcription factor [Triticum aestivum]
          Length = 306

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/155 (47%), Positives = 102/155 (65%), Gaps = 5/155 (3%)

Query: 9   AAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDA-----EARDEDRH 63
           A++L+     + N   G T     ++ +   SS++E    + +  DA      +R  D  
Sbjct: 131 ASFLTTIRSQLTNLCGGGTTATSPHSDEMVGSSEDEPCSGDADGSDAGMQEHSSRLADHE 190

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  L+DWWN HY+WPYPTE DK++LA 
Sbjct: 191 LKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARLALMDWWNTHYRWPYPTEEDKVRLAA 250

Query: 124 STGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
            TGLD KQINNWFINQRKRHWKPSE+M FA+M+ +
Sbjct: 251 MTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGV 285


>gi|15667619|dbj|BAB68310.1| transcription factor OSH3 [Oryza sativa Indica Group]
          Length = 365

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 67/99 (67%), Positives = 82/99 (82%)

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WPYP+E +
Sbjct: 222 RSDDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPYPSEME 281

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           K+ LAESTGL+QKQINNWFINQRKRHWKP+E M FAVM+
Sbjct: 282 KIALAESTGLEQKQINNWFINQRKRHWKPTEEMQFAVME 320


>gi|144905100|dbj|BAF56426.1| SHOOTMERISTEMLESS-like protein [Ruscus aculeatus]
          Length = 321

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/117 (64%), Positives = 91/117 (77%), Gaps = 4/117 (3%)

Query: 40  SSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQT 99
           SS+E+   +E    D +A  EDR LK +LLRK+  ++ SLK EF KK+KKGKLPKE+RQ 
Sbjct: 165 SSEEDVDVSENYV-DPQA--EDRELKGQLLRKYSGYLSSLKQEFLKKRKKGKLPKEARQQ 221

Query: 100 LLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH-FAVM 155
           LLDWW  HYKWPYP+E+ K+ LAESTGLDQKQINNWFINQRKRHWKPSE +  + VM
Sbjct: 222 LLDWWTRHYKWPYPSESQKMALAESTGLDQKQINNWFINQRKRHWKPSEEIQTYVVM 278


>gi|413933450|gb|AFW68001.1| putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 328

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/135 (48%), Positives = 87/135 (64%), Gaps = 6/135 (4%)

Query: 33  NTKDGAASSDEEYS-----GAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKK 87
           N  +G  SSDE+       G  +  +      ED  LK++LL K+  ++ +L  E S+KK
Sbjct: 162 NGYEGCGSSDEDEQEAVDLGGLSVLETGSPSGEDNELKNRLLNKYSGYLSNLWRELSRKK 221

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           KKGKLP+++RQ LL WW  HY+WPYP+E +K  LAESTGL+ KQINNWFINQRKRHWK +
Sbjct: 222 KKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQRKRHWKQA 281

Query: 148 -ENMHFAVMDNLSGP 161
              M  A  + + GP
Sbjct: 282 PPTMALATANYMLGP 296


>gi|357134921|ref|XP_003569063.1| PREDICTED: homeobox protein knotted-1-like 1-like [Brachypodium
           distachyon]
          Length = 300

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/155 (49%), Positives = 103/155 (66%), Gaps = 4/155 (2%)

Query: 9   AAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSG----AETEAQDAEARDEDRHL 64
           A++L+     + N   G     F + +   +S DE  SG    +E   Q+  +R  D  L
Sbjct: 126 ASFLATVRTQLSNLCGGGARATFHSDEFVGSSEDEPCSGDGDASEAGMQEHTSRLADHEL 185

Query: 65  KDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAES 124
           K+ LL+K+   +  L+ EF KK+KKGKLPK++R  L+DWWN HY+WPYPTE DK++LA  
Sbjct: 186 KEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARLALMDWWNTHYRWPYPTEDDKVRLAAM 245

Query: 125 TGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           TGLD KQINNWFINQRKRHWKPSE+M FA+M+ ++
Sbjct: 246 TGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVN 280


>gi|194703086|gb|ACF85627.1| unknown [Zea mays]
 gi|414871974|tpg|DAA50531.1| TPA: putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 352

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/118 (53%), Positives = 80/118 (67%), Gaps = 5/118 (4%)

Query: 35  KDGAASSDEEYS-----GAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKK 89
           ++G  SSDE+       G     +      E + LK+ LL K+  ++ SL  E S+KKKK
Sbjct: 189 EEGGGSSDEDEQETVDLGGLPVPETGSPSGEGKELKNHLLNKYSGYLSSLWRELSRKKKK 248

Query: 90  GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           GKLP+++RQ LL WW  HY+WPYP+E +K  LAESTGLD KQINNWFINQRKRHWKP+
Sbjct: 249 GKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQINNWFINQRKRHWKPA 306


>gi|222625719|gb|EEE59851.1| hypothetical protein OsJ_12427 [Oryza sativa Japonica Group]
          Length = 355

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/141 (53%), Positives = 93/141 (65%), Gaps = 20/141 (14%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPK++
Sbjct: 190 GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDA 249

Query: 97  RQTLLDWWNAHYKWPYPT--------------------EADKLQLAESTGLDQKQINNWF 136
           RQ LL+WW  HYKWPYP+                    E+ K+ LAESTGLD KQINNWF
Sbjct: 250 RQQLLNWWELHYKWPYPSAYSTANTCDVCTVDSVISIKESQKVALAESTGLDLKQINNWF 309

Query: 137 INQRKRHWKPSENMHFAVMDN 157
           INQRKRHWKPS+ M F +MD 
Sbjct: 310 INQRKRHWKPSDEMQFVMMDG 330


>gi|218193684|gb|EEC76111.1| hypothetical protein OsI_13373 [Oryza sativa Indica Group]
          Length = 357

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/141 (53%), Positives = 93/141 (65%), Gaps = 20/141 (14%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPK++
Sbjct: 192 GSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDA 251

Query: 97  RQTLLDWWNAHYKWPYPT--------------------EADKLQLAESTGLDQKQINNWF 136
           RQ LL+WW  HYKWPYP+                    E+ K+ LAESTGLD KQINNWF
Sbjct: 252 RQQLLNWWELHYKWPYPSAYSTANTCDVCTVDSVISIKESQKVALAESTGLDLKQINNWF 311

Query: 137 INQRKRHWKPSENMHFAVMDN 157
           INQRKRHWKPS+ M F +MD 
Sbjct: 312 INQRKRHWKPSDEMQFVMMDG 332


>gi|371538813|gb|AEX34736.1| shoot meristemless-like protein, partial [Populus laurifolia]
          Length = 95

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/70 (82%), Positives = 64/70 (91%)

Query: 87  KKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           +KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKP
Sbjct: 1   RKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKP 60

Query: 147 SENMHFAVMD 156
           SE+M F VMD
Sbjct: 61  SEDMQFVVMD 70


>gi|30348870|gb|AAP31412.1|AF457123_1 knotted1-like homeodomain protein liguleless4b [Zea mays]
          Length = 148

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 92/122 (75%), Gaps = 5/122 (4%)

Query: 40  SSDEEYSGAETEA-----QDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPK 94
           SS++E    +T+A     Q+  +R  DR LK+ LL+K+   +  L+ EF KK+KKGKLPK
Sbjct: 6   SSEDEPCSGDTDATTDPGQEHSSRLADRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPK 65

Query: 95  ESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAV 154
           ++R  L+DWWN HY+WPYPTE DK++LA  TGLD KQINNWFINQRKRHWKPSE+M FA+
Sbjct: 66  DARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFAL 125

Query: 155 MD 156
           M+
Sbjct: 126 ME 127


>gi|380746849|gb|AFE48355.1| shootmeristemless-like homeodomain protein, partial [Cuscuta
           pentagona]
          Length = 210

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 82/101 (81%), Gaps = 1/101 (0%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           EDR LK +LLRK+  ++GSLK EF KK+KKGKLPKE+RQ LLDWW  HYKWPYP+E+ K+
Sbjct: 79  EDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKV 138

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
            LAE+TGLDQKQINNWFINQRKRHWKP  +  F +MD  + 
Sbjct: 139 ALAEATGLDQKQINNWFINQRKRHWKPRGHA-FVMMDTAAA 178


>gi|66865827|gb|AAY57563.1| knotted 1-type homeobox protein 8 [Zea mays]
          Length = 137

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/99 (69%), Positives = 84/99 (84%), Gaps = 1/99 (1%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           ED+ LK +LLRK+G ++G L+ EFSK+KKKGKLPKE+RQ LL WW  HYKWPYP+E +K+
Sbjct: 7   EDKELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKM 66

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKP-SENMHFAVMDN 157
            LAE+TGLD KQINNWFINQRKRHWKP SE+M FA+M+ 
Sbjct: 67  ALAETTGLDPKQINNWFINQRKRHWKPASEDMPFAMMEG 105


>gi|50846082|gb|AAT84993.1| shoot meristemless-like protein [Chelidonium majus]
          Length = 159

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/126 (59%), Positives = 91/126 (72%), Gaps = 9/126 (7%)

Query: 28  GLKFSNTKDGAASSDEEYSGAETEAQDAEARD-------EDRHLKDKLLRKFGSHIGSLK 80
            L  S++ D       + +G+  E  D EA D       EDR LK +LLRK+  ++GSLK
Sbjct: 36  ALTVSSSSDSVGHDAVDRNGSSDE--DVEASDNYIDPQAEDRVLKGQLLRKYSGYLGSLK 93

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
            EF KK+KKGKLPKE+RQ LL+WW+ HYKWPYP+E+ K+ LAESTGLDQKQINNWFINQR
Sbjct: 94  QEFLKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKIALAESTGLDQKQINNWFINQR 153

Query: 141 KRHWKP 146
           KRHWKP
Sbjct: 154 KRHWKP 159


>gi|212723636|ref|NP_001131690.1| uncharacterized protein LOC100193050 [Zea mays]
 gi|194692252|gb|ACF80210.1| unknown [Zea mays]
 gi|414871975|tpg|DAA50532.1| TPA: putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 207

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 63/118 (53%), Positives = 80/118 (67%), Gaps = 5/118 (4%)

Query: 35  KDGAASSDEEYS-----GAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKK 89
           ++G  SSDE+       G     +      E + LK+ LL K+  ++ SL  E S+KKKK
Sbjct: 44  EEGGGSSDEDEQETVDLGGLPVPETGSPSGEGKELKNHLLNKYSGYLSSLWRELSRKKKK 103

Query: 90  GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           GKLP+++RQ LL WW  HY+WPYP+E +K  LAESTGLD KQINNWFINQRKRHWKP+
Sbjct: 104 GKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQINNWFINQRKRHWKPA 161


>gi|148536325|gb|ABQ85715.1| shoot meristemless-like protein [Populus deltoides]
          Length = 94

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 63/69 (91%)

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           KKGKLPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPS
Sbjct: 1   KKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPS 60

Query: 148 ENMHFAVMD 156
           E+M F VMD
Sbjct: 61  EDMQFVVMD 69


>gi|15637075|dbj|BAB68203.1| transcription factor OSH3 [Oryza meridionalis]
          Length = 136

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 81/97 (83%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WPYP+E +K+
Sbjct: 2   DDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPYPSEMEKI 61

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGL+QKQINNWFINQRKRHWKP+E M FAVM+
Sbjct: 62  ALAESTGLEQKQINNWFINQRKRHWKPTEEMQFAVME 98


>gi|15636929|dbj|BAB68130.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15636931|dbj|BAB68131.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15636933|dbj|BAB68132.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15636935|dbj|BAB68133.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15636937|dbj|BAB68134.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15636939|dbj|BAB68135.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15636941|dbj|BAB68136.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15636943|dbj|BAB68137.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15636945|dbj|BAB68138.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15636947|dbj|BAB68139.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15636949|dbj|BAB68140.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15636991|dbj|BAB68161.1| transcription factor OSH3 [Oryza rufipogon]
 gi|15636993|dbj|BAB68162.1| transcription factor OSH3 [Oryza rufipogon]
 gi|15636995|dbj|BAB68163.1| transcription factor OSH3 [Oryza rufipogon]
 gi|15636997|dbj|BAB68164.1| transcription factor OSH3 [Oryza rufipogon]
 gi|15636999|dbj|BAB68165.1| transcription factor OSH3 [Oryza rufipogon]
 gi|15637001|dbj|BAB68166.1| transcription factor OSH3 [Oryza rufipogon]
 gi|15637005|dbj|BAB68168.1| transcription factor OSH3 [Oryza rufipogon]
 gi|15637007|dbj|BAB68169.1| transcription factor OSH3 [Oryza rufipogon]
 gi|15637009|dbj|BAB68170.1| transcription factor OSH3 [Oryza rufipogon]
 gi|15637011|dbj|BAB68171.1| transcription factor OSH3 [Oryza rufipogon]
 gi|15637013|dbj|BAB68172.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15637015|dbj|BAB68173.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15637017|dbj|BAB68174.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15637021|dbj|BAB68176.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15637023|dbj|BAB68177.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15637049|dbj|BAB68190.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15637051|dbj|BAB68191.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15637053|dbj|BAB68192.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15637055|dbj|BAB68193.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15637063|dbj|BAB68197.1| transcription factor OSH3 [Oryza glumipatula]
 gi|15637069|dbj|BAB68200.1| transcription factor OSH3 [Oryza longistaminata]
 gi|15637071|dbj|BAB68201.1| transcription factor OSH3 [Oryza meridionalis]
 gi|15721900|dbj|BAB68402.1| Transcription factor OSH3 [Oryza sativa Indica Group]
          Length = 138

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 81/97 (83%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WPYP+E +K+
Sbjct: 2   DDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPYPSEMEKI 61

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGL+QKQINNWFINQRKRHWKP+E M FAVM+
Sbjct: 62  ALAESTGLEQKQINNWFINQRKRHWKPTEEMQFAVME 98


>gi|449467124|ref|XP_004151275.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
          Length = 397

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/106 (66%), Positives = 84/106 (79%)

Query: 56  EARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTE 115
           + R E+R LK+ LL+K+  ++ SLK E SKKKKKGKLPK++RQ LL WW  H KWPYP+E
Sbjct: 270 DPRAEERELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLRWWELHNKWPYPSE 329

Query: 116 ADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGP 161
           A+KL LAESTGLDQKQINNWFINQRKRHWKPSE++ F  M+    P
Sbjct: 330 AEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQFMGMEGFYHP 375


>gi|15636957|dbj|BAB68144.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636959|dbj|BAB68145.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636961|dbj|BAB68146.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636963|dbj|BAB68147.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636979|dbj|BAB68155.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636981|dbj|BAB68156.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636989|dbj|BAB68160.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15637043|dbj|BAB68187.1| transcription factor OSH3 [Oryza sativa Japonica Group]
          Length = 138

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 81/97 (83%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WPYP+E +K+
Sbjct: 2   DDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPYPSEMEKI 61

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGL+QKQINNWFINQRKRHWKP+E M FAVM+
Sbjct: 62  ALAESTGLEQKQINNWFINQRKRHWKPTEEMEFAVME 98


>gi|15636969|dbj|BAB68150.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636975|dbj|BAB68153.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636983|dbj|BAB68157.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636985|dbj|BAB68158.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15637019|dbj|BAB68175.1| transcription factor OSH3 [Oryza sativa Indica Group]
 gi|15637031|dbj|BAB68181.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15637047|dbj|BAB68189.1| transcription factor OSH3 [Oryza sativa Japonica Group]
          Length = 138

 Score =  128 bits (322), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 81/97 (83%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WPYP+E +K+
Sbjct: 2   DDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPYPSEMEKI 61

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGL+QKQINNWFINQRKRHWKP+E M FAVM+
Sbjct: 62  ALAESTGLEQKQINNWFINQRKRHWKPTEEMEFAVME 98


>gi|55416167|gb|AAV50045.1| homeobox protein [Saccharum hybrid cultivar Pindar]
          Length = 315

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 104/165 (63%), Gaps = 9/165 (5%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGCTG-----LKFSNTKDGAASSDEEYSGAETEA----QD 54
           L  PF    SF        S  C+         +++ D   SS++E    +T+     Q+
Sbjct: 114 LSRPFDEAASFLSSIQAQLSNLCSAGSSPAATATHSDDMMGSSEDEQCSGDTDVPDIGQE 173

Query: 55  AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPT 114
             +R  D  LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  LL+WWN HY+WPYPT
Sbjct: 174 HSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 233

Query: 115 EADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLS 159
           E DK++LA  TGLD KQINNWFINQ+K+HWKPSE+M FA+M+ ++
Sbjct: 234 EEDKVRLAAMTGLDPKQINNWFINQKKKHWKPSEDMRFALMEGVA 278


>gi|15637045|dbj|BAB68188.1| transcription factor OSH3 [Oryza glaberrima]
 gi|15637059|dbj|BAB68195.1| transcription factor OSH3 [Oryza glaberrima]
 gi|15637061|dbj|BAB68196.1| transcription factor OSH3 [Oryza glumipatula]
 gi|15637065|dbj|BAB68198.1| transcription factor OSH3 [Oryza barthii]
 gi|15637073|dbj|BAB68202.1| transcription factor OSH3 [Oryza longistaminata]
          Length = 138

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 81/97 (83%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WPYP+E +K+
Sbjct: 2   DDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPYPSEMEKI 61

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGL+QKQINNWFINQRKRHWKP+E M FAVM+
Sbjct: 62  ALAESTGLEQKQINNWFINQRKRHWKPTEEMQFAVME 98


>gi|15637057|dbj|BAB68194.1| transcription factor OSH3 [Oryza glaberrima]
 gi|15637067|dbj|BAB68199.1| transcription factor OSH3 [Oryza barthii]
          Length = 138

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 81/97 (83%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WPYP+E +K+
Sbjct: 2   DDKALKRHLLRKYTGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPYPSEMEKI 61

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGL+QKQINNWFINQRKRHWKP+E M FAVM+
Sbjct: 62  ALAESTGLEQKQINNWFINQRKRHWKPTEEMQFAVME 98


>gi|30348875|gb|AAP31414.1|AF457125_1 knotted1-like homeodomain protein liguleless3 [Zea mays]
          Length = 146

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/129 (54%), Positives = 93/129 (72%), Gaps = 4/129 (3%)

Query: 36  DGAASSDEEYSGAETE----AQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           D   SS++E    +T+     Q+  +   D  LK+ LL+K+   +  L+ EF KK+KKGK
Sbjct: 2   DMMGSSEDEQCSGDTDVPDMGQEHSSHLGDHELKEMLLKKYSGCLSRLRSEFLKKRKKGK 61

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMH 151
           LPK++R  LL+WWN HY+WPYPTE DK++LA  TGLD KQINNWFINQRKRHWKPSE+M 
Sbjct: 62  LPKDARTVLLEWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMR 121

Query: 152 FAVMDNLSG 160
           FA+M+ ++G
Sbjct: 122 FALMEGVAG 130


>gi|326497911|dbj|BAJ94818.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 152

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/128 (53%), Positives = 93/128 (72%), Gaps = 2/128 (1%)

Query: 31  FSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKG 90
             +++D   S D +  G++   Q+  +R  D  LK+ LL+K+   +  L+ EF KK+KKG
Sbjct: 6   VGSSEDEPCSGDAD--GSDAGMQEHSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKG 63

Query: 91  KLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENM 150
           KLPK++R  L+DWWN HY+WPYPTE DK++LA  TGLD KQINNWFINQRKRHWKPSE+M
Sbjct: 64  KLPKDARLALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDM 123

Query: 151 HFAVMDNL 158
            FA+M+ +
Sbjct: 124 RFALMEGV 131


>gi|4887614|dbj|BAA77820.1| HOS16 [Oryza sativa Japonica Group]
          Length = 138

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/109 (60%), Positives = 84/109 (77%)

Query: 52  AQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWP 111
            Q+  +R  D  LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  LL+WWN HY+WP
Sbjct: 14  GQEQSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWP 73

Query: 112 YPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           YPTE DKL+LA  TGLD KQINNWFINQRKRHWKPS+ M FA+M+ ++G
Sbjct: 74  YPTEEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGMRFALMEGVAG 122


>gi|15637003|dbj|BAB68167.1| transcription factor OSH3 [Oryza rufipogon]
          Length = 138

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 80/97 (82%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WPYP+E +K+
Sbjct: 2   DDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPYPSEMEKI 61

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGL+QKQINNWFINQRKRHWKP+E   FAVM+
Sbjct: 62  ALAESTGLEQKQINNWFINQRKRHWKPTEETQFAVME 98


>gi|449529644|ref|XP_004171808.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
           2-like [Cucumis sativus]
          Length = 397

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 83/106 (78%)

Query: 56  EARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTE 115
           + R E+R LK+ L +K+  ++ SLK E SKKKKKGKLPK++RQ LL WW  H KWPYP+E
Sbjct: 270 DPRAEERELKNHLXKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLRWWELHNKWPYPSE 329

Query: 116 ADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSGP 161
           A+KL LAESTGLDQKQINNWFINQRKRHWKPSE++ F  M+    P
Sbjct: 330 AEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQFMGMEGFYHP 375


>gi|380746851|gb|AFE48356.1| liguleless-like homeodomain protein [Cuscuta pentagona]
          Length = 350

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 66/126 (52%), Positives = 94/126 (74%), Gaps = 3/126 (2%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRH---LKDKLLRKFGSHIGSLKLEFSKKKKKGKLP 93
           G  S +EE   +  E +  +  D++R    +K+ L+RK+  ++ +L+ +F KK+KKGKLP
Sbjct: 211 GDTSEEEEEYASHGEVEVGDDGDDERQWAQIKEMLMRKYSGYLSNLRKDFLKKRKKGKLP 270

Query: 94  KESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFA 153
           K++R  LL WW++HY+WPYPTE +K +L E TGLDQKQINNWFINQRKRHW+PS++M FA
Sbjct: 271 KDARLVLLQWWDSHYRWPYPTEEEKNKLCEMTGLDQKQINNWFINQRKRHWRPSQDMRFA 330

Query: 154 VMDNLS 159
           +M+ LS
Sbjct: 331 LMEGLS 336


>gi|11463937|dbj|BAB18582.1| CRKNOX1 [Ceratopteris richardii]
          Length = 512

 Score =  125 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 71/128 (55%), Positives = 94/128 (73%), Gaps = 7/128 (5%)

Query: 37  GAASSDEEYSGAETEAQDAEARDE-------DRHLKDKLLRKFGSHIGSLKLEFSKKKKK 89
           G +S +E+    +    + +  +E       D+ +K++LLRK+  +I  LK EF KKKKK
Sbjct: 338 GGSSGEEDAEEGDVSCGEVDFHEEMIDPLADDQKVKEQLLRKYSGYIYKLKQEFLKKKKK 397

Query: 90  GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSEN 149
           GKLPK +R+ LLDWWN HYKWPYP+EA+K  LAE+TGLDQKQINNWFINQRKRHWKPSE+
Sbjct: 398 GKLPKNAREKLLDWWNQHYKWPYPSEAEKAALAETTGLDQKQINNWFINQRKRHWKPSED 457

Query: 150 MHFAVMDN 157
           M + ++D+
Sbjct: 458 MQYVMVDS 465


>gi|5103723|dbj|BAA79223.1| knotted1-type homeobox protein OSH3 [Oryza sativa]
          Length = 367

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/99 (65%), Positives = 80/99 (80%)

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WP P+E +
Sbjct: 224 RSDDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEME 283

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           K+ LAESTGL+QKQINN FINQRKRHWKP+E M FAVM+
Sbjct: 284 KIALAESTGLEQKQINNCFINQRKRHWKPTEEMEFAVME 322


>gi|222625720|gb|EEE59852.1| hypothetical protein OsJ_12429 [Oryza sativa Japonica Group]
          Length = 347

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/99 (65%), Positives = 80/99 (80%)

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WP P+E +
Sbjct: 204 RSDDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEME 263

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           K+ LAESTGL+QKQINN FINQRKRHWKP+E M FAVM+
Sbjct: 264 KIALAESTGLEQKQINNCFINQRKRHWKPTEEMEFAVME 302


>gi|15636951|dbj|BAB68141.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636955|dbj|BAB68143.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636965|dbj|BAB68148.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636973|dbj|BAB68152.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636977|dbj|BAB68154.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15637025|dbj|BAB68178.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15637027|dbj|BAB68179.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15637029|dbj|BAB68180.1| transcription factor OSH3 [Oryza sativa Japonica Group]
          Length = 138

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 80/97 (82%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WP P+E +K+
Sbjct: 2   DDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKI 61

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGL+QKQINNWFINQRKRHWKP+E M FAVM+
Sbjct: 62  ALAESTGLEQKQINNWFINQRKRHWKPTEEMEFAVME 98


>gi|115455081|ref|NP_001051141.1| Os03g0727200 [Oryza sativa Japonica Group]
 gi|113549612|dbj|BAF13055.1| Os03g0727200 [Oryza sativa Japonica Group]
          Length = 365

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/99 (65%), Positives = 80/99 (80%)

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WP P+E +
Sbjct: 222 RSDDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEME 281

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           K+ LAESTGL+QKQINN FINQRKRHWKP+E M FAVM+
Sbjct: 282 KIALAESTGLEQKQINNCFINQRKRHWKPTEEMEFAVME 320


>gi|75164699|sp|Q948L5.1|KNOS7_ORYSJ RecName: Full=Homeobox protein knotted-1-like 7; AltName:
           Full=Homeobox protein HOS13; AltName: Full=Homeobox
           protein OSH3
 gi|15667617|dbj|BAB68309.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|41469271|gb|AAS07153.1| knotted1-type homeobox protein [Oryza sativa Japonica Group]
 gi|108710860|gb|ABF98655.1| KNOX1 domain containing protein, expressed [Oryza sativa Japonica
           Group]
          Length = 365

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/99 (65%), Positives = 80/99 (80%)

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WP P+E +
Sbjct: 222 RSDDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEME 281

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           K+ LAESTGL+QKQINN FINQRKRHWKP+E M FAVM+
Sbjct: 282 KIALAESTGLEQKQINNCFINQRKRHWKPTEEMEFAVME 320


>gi|15636953|dbj|BAB68142.1| transcription factor OSH3 [Oryza sativa Japonica Group]
          Length = 138

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 80/97 (82%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL W   HY+WPYP+E +K+
Sbjct: 2   DDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWCELHYRWPYPSEMEKI 61

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGL+QKQINNWFINQRKRHWKP+E M FAVM+
Sbjct: 62  ALAESTGLEQKQINNWFINQRKRHWKPTEEMEFAVME 98


>gi|4887612|dbj|BAA77819.1| HOS13 [Oryza sativa Japonica Group]
          Length = 222

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/99 (65%), Positives = 80/99 (80%)

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WP P+E +
Sbjct: 79  RSDDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEME 138

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           K+ LAESTGL+QKQINN FINQRKRHWKP+E M FAVM+
Sbjct: 139 KIALAESTGLEQKQINNCFINQRKRHWKPTEEMEFAVME 177


>gi|66865823|gb|AAY57560.1| knotted 1-type homeobox protein 4 [Zea mays]
          Length = 121

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/94 (69%), Positives = 79/94 (84%)

Query: 65  KDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAES 124
           K +LL+K+  ++ SL+ EFSKKKKKGKLPKE+RQ LL WW  HYKWPYP+E +K+ LAE+
Sbjct: 1   KYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAEA 60

Query: 125 TGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
           TGLDQKQINNWFINQRKRHWKPSE+M F +M+  
Sbjct: 61  TGLDQKQINNWFINQRKRHWKPSEDMPFVMMEGF 94


>gi|11463939|dbj|BAB18583.1| CRKNOX1s [Ceratopteris richardii]
          Length = 240

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/179 (46%), Positives = 111/179 (62%), Gaps = 26/179 (14%)

Query: 4   LYLPFAAWLSFF--FEFIINPSEGCTGLKFSNTKDGAASSDEE------YSGAETEAQDA 55
           L  P+   ++FF   E  +N     T ++  +T D  A ++         SG  +  +DA
Sbjct: 16  LMQPYKEAMTFFRKIELQLNALSKGT-VRLCHTGDDKADANCNSGQHGLISGGSSGEEDA 74

Query: 56  EARD-----------------EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQ 98
           E  D                 +D+ +K++LLRK+  +I  LK EF KKKKKGKLPK +R+
Sbjct: 75  EEGDVSCGEVDFHEEMIDPLADDQKVKEQLLRKYSGYIYKLKQEFLKKKKKGKLPKNARE 134

Query: 99  TLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDN 157
            LLDWWN HYKWPYP+EA+K  LAE+TGLDQKQINNWFINQRKRHWKPSE+M + ++D+
Sbjct: 135 KLLDWWNQHYKWPYPSEAEKAALAETTGLDQKQINNWFINQRKRHWKPSEDMQYVMVDS 193


>gi|449454010|ref|XP_004144749.1| PREDICTED: homeobox protein knotted-1-like 1-like [Cucumis sativus]
 gi|449490809|ref|XP_004158713.1| PREDICTED: homeobox protein knotted-1-like 1-like [Cucumis sativus]
          Length = 321

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/167 (45%), Positives = 100/167 (59%), Gaps = 14/167 (8%)

Query: 7   PFAAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAE---------- 56
           PF     F     +  S  C G  F+   D  ++ ++E SG   E   +           
Sbjct: 136 PFDEATMFLTNIELELSNLCKG-SFTMMSDSRSAMNDEVSGTPEEEPSSYEEVEMPRNHE 194

Query: 57  ---ARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYP 113
               R  ++ LK+ LL+K+  ++ SLK EF KK+KK KLPK++R  LLDWWN HYKWPYP
Sbjct: 195 PFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLDWWNTHYKWPYP 254

Query: 114 TEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           TE +K +L+ +TGLDQKQINNWFINQRKRHWKP E+M F +MD +  
Sbjct: 255 TEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVGA 301


>gi|6016225|sp|P56667.1|KNX10_MAIZE RecName: Full=Homeobox protein knotted-1-like 10
 gi|913143|gb|AAB33489.1| KNOX10=class 1 knotted1-like homeobox gene knox10 product
           {homeodomain} [maize, Peptide Partial, 88 aa]
          Length = 88

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/88 (63%), Positives = 70/88 (79%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           ED  LK++LL K+  ++ SL  E S+KKKKGKLP+++RQ LL WW  HY+WPYP+E +K 
Sbjct: 1   EDNDLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKA 60

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPS 147
            LAESTGL+ KQINNWFINQRKRHWK +
Sbjct: 61  ALAESTGLEAKQINNWFINQRKRHWKQA 88


>gi|15636925|dbj|BAB68128.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636927|dbj|BAB68129.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636967|dbj|BAB68149.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636971|dbj|BAB68151.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15636987|dbj|BAB68159.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15637033|dbj|BAB68182.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15637035|dbj|BAB68183.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15637037|dbj|BAB68184.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15637039|dbj|BAB68185.1| transcription factor OSH3 [Oryza sativa Japonica Group]
 gi|15637041|dbj|BAB68186.1| transcription factor OSH3 [Oryza sativa Japonica Group]
          Length = 138

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/97 (65%), Positives = 79/97 (81%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +D+ LK  LLRK+  ++G L+ E SKK+KKGKLPKE+RQ LL WW  HY+WP P+E +K+
Sbjct: 2   DDKALKRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKI 61

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
            LAESTGL+QKQINN FINQRKRHWKP+E M FAVM+
Sbjct: 62  ALAESTGLEQKQINNCFINQRKRHWKPTEEMEFAVME 98


>gi|218188058|gb|EEC70485.1| hypothetical protein OsI_01554 [Oryza sativa Indica Group]
          Length = 110

 Score =  119 bits (297), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/93 (65%), Positives = 76/93 (81%)

Query: 68  LLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGL 127
           LL+K+   +  L+ EF KK+KKGKLPK++R  LL+WWN HY+WPYPTE DKL+LA  TGL
Sbjct: 2   LLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGL 61

Query: 128 DQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           D KQINNWFINQRKRHWKPS+ M FA+M+ ++G
Sbjct: 62  DPKQINNWFINQRKRHWKPSDGMRFALMEGVAG 94


>gi|398257720|gb|AFO71871.1| STM-like protein 1, partial [Lamprocapnos spectabilis]
          Length = 140

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/127 (58%), Positives = 89/127 (70%), Gaps = 6/127 (4%)

Query: 14  FFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQD--AEARDEDRHLKDKLLRK 71
           FFF  I +  +G T    S+   G   S E+    E +A D   + R ED+ LK KL+RK
Sbjct: 18  FFFSTIESQLKGLTVASSSSDSAGQNGSSED----ELDATDDFIDPRAEDKVLKVKLMRK 73

Query: 72  FGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQ 131
           +  ++GSLK EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+EA KL LAESTGLDQKQ
Sbjct: 74  YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSKHYKWPYPSEAQKLALAESTGLDQKQ 133

Query: 132 INNWFIN 138
           INNWFIN
Sbjct: 134 INNWFIN 140


>gi|371767742|gb|AEX56226.1| knotted-like 1 protein [Gymnadenia odoratissima]
          Length = 140

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/126 (57%), Positives = 89/126 (70%), Gaps = 1/126 (0%)

Query: 7   PFAAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKD 66
           PF    +F     I  S+ C    F  + +   SS+EE SG E E  +  ++DE+R LK+
Sbjct: 16  PFDEATAFLNTIEIQLSDLCKPAAFI-SDEAVGSSEEELSGGEVEVPELHSKDEERDLKE 74

Query: 67  KLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTG 126
           KLLRK+  ++ SLK EFSKKKKKGKLP+E+RQ LLDWW AHYKWPYPTEADK+ LAESTG
Sbjct: 75  KLLRKYSGYLSSLKKEFSKKKKKGKLPREARQLLLDWWTAHYKWPYPTEADKISLAESTG 134

Query: 127 LDQKQI 132
           LDQKQI
Sbjct: 135 LDQKQI 140


>gi|297722585|ref|NP_001173656.1| Os03g0772100 [Oryza sativa Japonica Group]
 gi|108711301|gb|ABF99096.1| KNOX1 domain containing protein [Oryza sativa Japonica Group]
 gi|255674932|dbj|BAH92384.1| Os03g0772100 [Oryza sativa Japonica Group]
          Length = 385

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 88/166 (53%), Gaps = 43/166 (25%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           +G  SS+EE   +  EA+  E    D+ LK +LL K+G  +G L+  FSK+ KKGKLPKE
Sbjct: 183 EGTGSSEEEQDTSCPEAE--EIDPSDKQLKHQLLMKYGGSLGDLRQAFSKRTKKGKLPKE 240

Query: 96  SRQTLLDWWNAHY-KWPYPT--------------------------------------EA 116
           +R  LL WW  HY KWPYP+                                      E 
Sbjct: 241 ARLKLLHWWELHYDKWPYPSVRTHIYASHLINSTTFFCTKLDLMKMRELLGCTCVYEQEV 300

Query: 117 DKLQLAESTGLDQKQINNWFINQRKRHWKPS--ENMHFAVMDNLSG 160
           +K+ LA++TGLDQKQI+NWFINQRKRHWKP+    M F  ++   G
Sbjct: 301 EKMTLAQTTGLDQKQISNWFINQRKRHWKPTPVAGMTFPTVEAAGG 346


>gi|218193477|gb|EEC75904.1| hypothetical protein OsI_12972 [Oryza sativa Indica Group]
          Length = 337

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/88 (67%), Positives = 70/88 (79%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           ED+ LK  LL K+  ++ SL  E SKKKKKGKLP+++RQ LL WW  HY+WPYP+E +K 
Sbjct: 197 EDKELKSHLLNKYSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKA 256

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPS 147
            LAESTGLD KQINNWFINQRKRHWKP+
Sbjct: 257 ALAESTGLDAKQINNWFINQRKRHWKPT 284


>gi|75138249|sp|Q75LX7.1|KNOS4_ORYSJ RecName: Full=Homeobox protein knotted-1-like 4; AltName:
           Full=Homeobox protein OSH10
 gi|40538935|gb|AAR87192.1| putative KNOTTED-1-like homeobox protein [Oryza sativa Japonica
           Group]
 gi|222625532|gb|EEE59664.1| hypothetical protein OsJ_12066 [Oryza sativa Japonica Group]
          Length = 337

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/88 (67%), Positives = 70/88 (79%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           ED+ LK  LL K+  ++ SL  E SKKKKKGKLP+++RQ LL WW  HY+WPYP+E +K 
Sbjct: 197 EDKELKSHLLNKYSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKA 256

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPS 147
            LAESTGLD KQINNWFINQRKRHWKP+
Sbjct: 257 ALAESTGLDAKQINNWFINQRKRHWKPT 284


>gi|398257716|gb|AFO71869.1| STM-like protein 1, partial [Capnoides sempervirens]
          Length = 140

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/127 (58%), Positives = 87/127 (68%), Gaps = 6/127 (4%)

Query: 14  FFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDA--EARDEDRHLKDKLLRK 71
            FF  I +  +G T    S+   G   S EE    E +A D   + R EDR LK KLLRK
Sbjct: 18  LFFSSIESQLKGLTIASSSSDSAGLNGSSEE----ELDATDGFIDPRAEDRELKVKLLRK 73

Query: 72  FGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQ 131
           +  ++GSLK EF KK+KKGKLPK +RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQ
Sbjct: 74  YSGYLGSLKQEFMKKRKKGKLPKNARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQ 133

Query: 132 INNWFIN 138
           INNWFIN
Sbjct: 134 INNWFIN 140


>gi|29788837|gb|AAP03383.1| putative homeobox, 5'-partial [Oryza sativa Japonica Group]
          Length = 175

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/88 (67%), Positives = 70/88 (79%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           ED+ LK  LL K+  ++ SL  E SKKKKKGKLP+++RQ LL WW  HY+WPYP+E +K 
Sbjct: 35  EDKELKSHLLNKYSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKA 94

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPS 147
            LAESTGLD KQINNWFINQRKRHWKP+
Sbjct: 95  ALAESTGLDAKQINNWFINQRKRHWKPT 122


>gi|108710344|gb|ABF98139.1| Homeobox protein knotted-1-like 10, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 155

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/88 (67%), Positives = 70/88 (79%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           ED+ LK  LL K+  ++ SL  E SKKKKKGKLP+++RQ LL WW  HY+WPYP+E +K 
Sbjct: 15  EDKELKSHLLNKYSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKA 74

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPS 147
            LAESTGLD KQINNWFINQRKRHWKP+
Sbjct: 75  ALAESTGLDAKQINNWFINQRKRHWKPT 102


>gi|148536323|gb|ABQ85714.1| shoot meristemless-like protein [Populus balsamifera]
 gi|148536327|gb|ABQ85716.1| shoot meristemless-like protein [Populus maximowiczii]
 gi|148536331|gb|ABQ85718.1| shoot meristemless-like protein [Populus trichocarpa]
          Length = 98

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 51/62 (82%), Positives = 56/62 (90%)

Query: 95  ESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAV 154
           E+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M F V
Sbjct: 12  EARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVV 71

Query: 155 MD 156
           MD
Sbjct: 72  MD 73


>gi|148536329|gb|ABQ85717.1| shoot meristemless-like protein [Populus nigra]
          Length = 98

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 51/62 (82%), Positives = 56/62 (90%)

Query: 95  ESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAV 154
           E+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFINQRKRHWKPSE+M F V
Sbjct: 12  EARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVV 71

Query: 155 MD 156
           MD
Sbjct: 72  MD 73


>gi|6016224|sp|P56666.1|KNOX8_MAIZE RecName: Full=Homeobox protein knotted-1-like 8
          Length = 85

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/84 (72%), Positives = 73/84 (86%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +LLRK+G ++G L+ EFSK+KKKGKLPKE+RQ LL WW  HYKWPYP+E +K+ LAE
Sbjct: 2   LKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAE 61

Query: 124 STGLDQKQINNWFINQRKRHWKPS 147
           +TGLD KQINNWFINQRKRHWKP+
Sbjct: 62  TTGLDPKQINNWFINQRKRHWKPA 85


>gi|371767732|gb|AEX56221.1| knotted-like 2 protein [Orchis anthropophora]
          Length = 122

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/108 (63%), Positives = 86/108 (79%), Gaps = 1/108 (0%)

Query: 26  CTG-LKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFS 84
           CT  L+   + + A SS+EE SG E E  ++ ++DE+R LK+KLLRK+  ++ SLK EFS
Sbjct: 15  CTPPLRPFVSDEAAGSSEEELSGGEVEVPESHSKDEERDLKEKLLRKYSGYLSSLKKEFS 74

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           KKKKKGKLP+E+RQ LLDWW AHYKWPYPTEADK+ LAE+TGLDQKQI
Sbjct: 75  KKKKKGKLPREARQVLLDWWTAHYKWPYPTEADKISLAETTGLDQKQI 122


>gi|6016219|sp|P56662.1|KNOX4_MAIZE RecName: Full=Homeobox protein knotted-1-like 4
 gi|913142|gb|AAB33488.1| KNOX4=class 1 knotted1-like homeobox gene knox4 product
           {homeodomain} [maize, Peptide Partial, 85 aa]
          Length = 85

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/84 (73%), Positives = 73/84 (86%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +LL+K+  ++ SL+ EFSKKKKKGKLPKE+RQ LL WW  HYKWPYP+E +K+ LAE
Sbjct: 2   LKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAE 61

Query: 124 STGLDQKQINNWFINQRKRHWKPS 147
           +TGLDQKQINNWFINQRKRHWKPS
Sbjct: 62  ATGLDQKQINNWFINQRKRHWKPS 85


>gi|371767726|gb|AEX56218.1| knotted-like 2 protein [Dactylorhiza incarnata]
          Length = 143

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/128 (55%), Positives = 89/128 (69%), Gaps = 2/128 (1%)

Query: 7   PFAAWLSFFFEFIINPSEGCTGLKFSN--TKDGAASSDEEYSGAETEAQDAEARDEDRHL 64
           PF    +F     I  S  C     +   + + A SS+EE SG E E  ++ ++DE+R L
Sbjct: 16  PFDEATAFLNTMEIQLSHLCKPPSLAPFISDEAAGSSEEELSGGEVEVPESHSKDEERDL 75

Query: 65  KDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAES 124
           K+KLLRK+  ++ SLK EFSKKKKKGKLP+E+RQ LLDWW AHYKWPYPTEADK+ LAE+
Sbjct: 76  KEKLLRKYSGYLSSLKKEFSKKKKKGKLPREARQVLLDWWTAHYKWPYPTEADKISLAET 135

Query: 125 TGLDQKQI 132
           T LDQKQI
Sbjct: 136 TRLDQKQI 143


>gi|6016218|sp|P56661.1|KNOX3_MAIZE RecName: Full=Homeobox protein knotted-1-like 3
          Length = 88

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/88 (67%), Positives = 73/88 (82%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +D+ LK +LLRK+   +G+L+ E  KK+KK KLPKE+RQ LL WW  HY+WPYP+E +K+
Sbjct: 1   DDKELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKI 60

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPS 147
            LAESTGL+QKQINNWFINQRKRHWKPS
Sbjct: 61  ALAESTGLEQKQINNWFINQRKRHWKPS 88


>gi|357115636|ref|XP_003559594.1| PREDICTED: homeobox protein knotted-1-like 4-like [Brachypodium
           distachyon]
          Length = 313

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/88 (65%), Positives = 69/88 (78%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           ED  LK  LL K+  ++ SL  + SKKKKKGKLP+++RQ LL WW  HY+WPYP+E +K 
Sbjct: 183 EDNELKSHLLSKYSGYLTSLWRDLSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKA 242

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKPS 147
            LAESTGLD KQINNWFINQRKRHWKP+
Sbjct: 243 ALAESTGLDGKQINNWFINQRKRHWKPT 270


>gi|371767738|gb|AEX56224.1| knotted-like 1 protein [Dactylorhiza incarnata]
          Length = 148

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 80/97 (82%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           + A SS+EE SG E E  ++ ++DE+R LK+KLLRK+  ++ SLK EFSKKKKKGKLP+E
Sbjct: 52  EAAGSSEEELSGGEVEVPESHSKDEERDLKEKLLRKYSGYLSSLKKEFSKKKKKGKLPRE 111

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           +RQ LLDWW AHYKWPYPTEADK+ LAE+T LDQKQI
Sbjct: 112 ARQVLLDWWTAHYKWPYPTEADKISLAETTRLDQKQI 148


>gi|398257714|gb|AFO71868.1| STM-like protein 2, partial [Lamprocapnos spectabilis]
          Length = 105

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 82/107 (76%), Gaps = 3/107 (2%)

Query: 32  SNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           S+  D   SSDE+   +E    D +A  EDR LK +LLRK+  ++GSLK EF KK+KKGK
Sbjct: 2   SDHSDRNGSSDEDVDASENYI-DPQA--EDRELKGQLLRKYSGYLGSLKQEFLKKRKKGK 58

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           LPKE+RQ LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFIN
Sbjct: 59  LPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFIN 105


>gi|398257710|gb|AFO71866.1| STM-like protein 2, partial [Capnoides sempervirens]
          Length = 145

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/100 (67%), Positives = 79/100 (79%), Gaps = 3/100 (3%)

Query: 39  ASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQ 98
            SSDE+   +E    D +A  EDR LK +LLRK+  ++GSLK EF KK+KKGKLPKE+RQ
Sbjct: 49  GSSDEDVDASENYI-DPQA--EDRELKGQLLRKYSGYLGSLKQEFLKKRKKGKLPKEARQ 105

Query: 99  TLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
            LLDWW+ HYKWPYP+E+ KL LAESTGLDQKQINNWFIN
Sbjct: 106 QLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFIN 145


>gi|6016227|sp|P56668.1|KNX11_MAIZE RecName: Full=Homeobox protein knotted-1-like 11
          Length = 88

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           DR LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  L+DWWN HY+WPYPTE DK++
Sbjct: 2   DRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVR 61

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPS 147
           LA +TGLD KQINNWFINQRKRHWKPS
Sbjct: 62  LAAATGLDPKQINNWFINQRKRHWKPS 88


>gi|329757145|gb|AEC04752.1| knotted-like homeobox KNOX3 [Fragaria vesca]
          Length = 360

 Score =  112 bits (280), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/122 (55%), Positives = 83/122 (68%), Gaps = 4/122 (3%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G   S EE +G      D  A+D D  ++ KLL+K+G  +GSL  E  KKKK GKLPKE+
Sbjct: 207 GQGGSSEE-AGVNENCIDPRAKDWD--IRAKLLQKYGGSLGSLSQELKKKKKNGKLPKEA 263

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENMHFAVM 155
           R  L +WW+ +Y WPYP+E  KL LA STGL  KQINNWFINQRKRHWKPS E M  A++
Sbjct: 264 RVQLQEWWSRNYTWPYPSEPQKLALAASTGLTVKQINNWFINQRKRHWKPSAEGMQLAMV 323

Query: 156 DN 157
           D+
Sbjct: 324 DH 325


>gi|222625535|gb|EEE59667.1| hypothetical protein OsJ_12069 [Oryza sativa Japonica Group]
          Length = 353

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 3/108 (2%)

Query: 42  DEEYSGAETEAQDAEARDE-DRHLKDKLLRKFGSHIGSLKLEFSKKKKK--GKLPKESRQ 98
           ++E +G   E   A   +E     +  L+ K+  ++ SL  E S KKK   G LP+++R 
Sbjct: 183 EDEVAGGLPEKSAAFGENEVTTTTRRHLMNKYSGYLNSLWTEISNKKKNSTGHLPRDARH 242

Query: 99  TLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            LL WW+ HY+WPYP+EA+K  LAESTGLD+KQ+ NWFINQRKRHWKP
Sbjct: 243 KLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKRHWKP 290


>gi|380746843|gb|AFE48352.1| KNOTTED-like 1-3b homeodomain protein, partial [Cuscuta pentagona]
          Length = 86

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 53/62 (85%)

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           RQ LL WW  HYKWPYP+E +K+ LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD
Sbjct: 1   RQKLLSWWELHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMD 60

Query: 157 NL 158
            L
Sbjct: 61  GL 62


>gi|75226461|sp|Q75LX9.1|KNOS5_ORYSJ RecName: Full=Putative homeobox protein knotted-1-like 5
 gi|40538948|gb|AAR87205.1| putative KNOX class homeodomain protein [Oryza sativa Japonica
           Group]
          Length = 337

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 2/81 (2%)

Query: 68  LLRKFGSHIGSLKLEFSKKKKK--GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
           L+ K+  ++ SL  E S KKK   G LP+++R  LL WW+ HY+WPYP+EA+K  LAEST
Sbjct: 210 LMNKYSGYLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAEST 269

Query: 126 GLDQKQINNWFINQRKRHWKP 146
           GLD+KQ+ NWFINQRKRHWKP
Sbjct: 270 GLDKKQVTNWFINQRKRHWKP 290


>gi|218193479|gb|EEC75906.1| hypothetical protein OsI_12975 [Oryza sativa Indica Group]
          Length = 336

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 2/81 (2%)

Query: 68  LLRKFGSHIGSLKLEFSKKKKK--GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
           L+ K+  ++ SL  E S KKK   G LP+++R  LL WW+ HY+WPYP+EA+K  LAEST
Sbjct: 209 LMNKYSGYLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAEST 268

Query: 126 GLDQKQINNWFINQRKRHWKP 146
           GLD+KQ+ NWFINQRKRHWKP
Sbjct: 269 GLDKKQVTNWFINQRKRHWKP 289


>gi|398257712|gb|AFO71867.1| STM-like protein 2, partial [Chelidonium majus]
          Length = 144

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 9/118 (7%)

Query: 28  GLKFSNTKDGAASSDEEYSGAETEAQDAEARD-------EDRHLKDKLLRKFGSHIGSLK 80
            L  S++ D       + +G+  E  D EA D       EDR LK +LLRK+  ++GSLK
Sbjct: 29  ALTVSSSSDSVGHDAVDRNGSSDE--DVEASDNYIDPQAEDRELKGQLLRKYSGYLGSLK 86

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
            EF KK+KKGKLPKE+RQ LL+WW+ HYKWPYP+E+ K+ LAESTGLDQKQINNWFIN
Sbjct: 87  QEFLKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKIALAESTGLDQKQINNWFIN 144


>gi|108710347|gb|ABF98142.1| Homeotic protein knotted-1, putative [Oryza sativa Japonica Group]
          Length = 169

 Score =  110 bits (274), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 75/115 (65%), Gaps = 3/115 (2%)

Query: 35  KDGAASSDEEYSGAETEAQDAEARDE-DRHLKDKLLRKFGSHIGSLKLEFSKKKKK--GK 91
           +D +   ++E +G   E   A   +E     +  L+ K+  ++ SL  E S KKK   G 
Sbjct: 4   EDVSYDYEDEVAGGLPEKSAAFGENEVTTTTRRHLMNKYSGYLNSLWTEISNKKKNSTGH 63

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+++R  LL WW+ HY+WPYP+EA+K  LAESTGLD+KQ+ NWFINQRKRHWKP
Sbjct: 64  LPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKRHWKP 118


>gi|164454389|dbj|BAF96741.1| knotted-like homeobox transcription factor MKN5 [Physcomitrella
           patens]
          Length = 404

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 76/128 (59%), Gaps = 13/128 (10%)

Query: 28  GLKFSNTKDGAASSDEEYSGA-----------ETEAQDAEARDEDRHLKDKLLRKFGSHI 76
           G      + GA +SD+ Y  A           E+   D  A DE+  +K  L +K+G HI
Sbjct: 253 GFDIGPMEYGAQASDDLYLPADENLMYPLDIDESVVVDPMASDEE--IKKALRKKYGRHI 310

Query: 77  GSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWF 136
           G LK EF++ +KKGKLP  +R  L DW+N H  WPYP+E +K  L +  GL+ KQINNWF
Sbjct: 311 GELKAEFNRVRKKGKLPSSARSILKDWFNRHSYWPYPSEMEKQYLQKLCGLNLKQINNWF 370

Query: 137 INQRKRHW 144
           IN+RKRHW
Sbjct: 371 INERKRHW 378


>gi|168051647|ref|XP_001778265.1| KNOX class 1 protein MKN5 [Physcomitrella patens subsp. patens]
 gi|162670362|gb|EDQ56932.1| KNOX class 1 protein MKN5 [Physcomitrella patens subsp. patens]
          Length = 428

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 74/119 (62%), Gaps = 13/119 (10%)

Query: 37  GAASSDEEYSGA-----------ETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSK 85
           GA +SD+ Y  A           E+   D  A DE+  +K  L +K+G HIG LK EF++
Sbjct: 286 GAQASDDLYLPADENLMYPLDIDESVVVDPMASDEE--IKKALRKKYGRHIGELKAEFNR 343

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
            +KKGKLP  +R  L DW+N H  WPYP+E +K  L +  GL+ KQINNWFIN+RKRHW
Sbjct: 344 VRKKGKLPSSARSILKDWFNRHSYWPYPSEMEKQYLQKLCGLNLKQINNWFINERKRHW 402


>gi|168011803|ref|XP_001758592.1| KNOX class 1 protein MKN2 [Physcomitrella patens subsp. patens]
 gi|162690202|gb|EDQ76570.1| KNOX class 1 protein MKN2 [Physcomitrella patens subsp. patens]
          Length = 445

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 65/96 (67%), Gaps = 2/96 (2%)

Query: 49  ETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHY 108
           E+   D  A DED  +K  L +K+G HIG LK EF++ +KKGKLP  +R  L DW+N H 
Sbjct: 326 ESVIVDPMASDED--IKKALRKKYGRHIGELKAEFNRVRKKGKLPTSARTILKDWFNRHS 383

Query: 109 KWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
            WPYP+E +K  L    GL+ KQINNWFIN+RKRHW
Sbjct: 384 HWPYPSEMEKQYLQRICGLNLKQINNWFINERKRHW 419


>gi|164454385|dbj|BAF96739.1| knotted1-like homeobox transcription factor MKN2 [Physcomitrella
           patens]
          Length = 410

 Score =  109 bits (272), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 65/96 (67%), Gaps = 2/96 (2%)

Query: 49  ETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHY 108
           E+   D  A DED  +K  L +K+G HIG LK EF++ +KKGKLP  +R  L DW+N H 
Sbjct: 291 ESVIVDPMASDED--IKKALRKKYGRHIGELKAEFNRVRKKGKLPTSARTILKDWFNRHS 348

Query: 109 KWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
            WPYP+E +K  L    GL+ KQINNWFIN+RKRHW
Sbjct: 349 HWPYPSEMEKQYLQRICGLNLKQINNWFINERKRHW 384


>gi|60100884|gb|AAK61308.2|AF285147_1 class 1 KNOTTED1-like protein MKN2 [Physcomitrella patens]
          Length = 384

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 65/96 (67%), Gaps = 2/96 (2%)

Query: 49  ETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHY 108
           E+   D  A DED  +K  L +K+G HIG LK EF++ +KKGKLP  +R  L DW+N H 
Sbjct: 235 ESVIVDPMASDED--IKKALRKKYGRHIGELKAEFNRVRKKGKLPTSARTILKDWFNRHS 292

Query: 109 KWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
            WPYP+E +K  L    GL+ KQINNWFIN+RKRHW
Sbjct: 293 HWPYPSEMEKQYLQRICGLNLKQINNWFINERKRHW 328


>gi|6016220|sp|P56663.1|KNOX5_MAIZE RecName: Full=Homeobox protein knotted-1-like 5
          Length = 85

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/84 (67%), Positives = 69/84 (82%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  L+DWWN HY+WPYPTE DK++LA 
Sbjct: 2   LKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAA 61

Query: 124 STGLDQKQINNWFINQRKRHWKPS 147
            TGLD KQINNWFINQRKRHWKPS
Sbjct: 62  MTGLDPKQINNWFINQRKRHWKPS 85


>gi|302813278|ref|XP_002988325.1| KNOX transcription factor [Selaginella moellendorffii]
 gi|300144057|gb|EFJ10744.1| KNOX transcription factor [Selaginella moellendorffii]
          Length = 413

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 82/112 (73%), Gaps = 3/112 (2%)

Query: 39  ASSDEEYSGAETEAQ-DAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESR 97
           A  +E+ S +E   + D  A+DE+  LK+ L +++G++I  LK EF KKKKKGKLPK S 
Sbjct: 289 AEIEEDISSSEVGNEVDPLAKDEN--LKEYLAQRYGAYIKGLKQEFLKKKKKGKLPKHST 346

Query: 98  QTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSEN 149
           + L +WW AH KWPYP+E +K  LA  TGLDQKQINNWFINQRKRHW PSE+
Sbjct: 347 EKLYEWWEAHIKWPYPSEQEKANLATDTGLDQKQINNWFINQRKRHWNPSEH 398


>gi|302819518|ref|XP_002991429.1| KNOX transcription factor [Selaginella moellendorffii]
 gi|300140822|gb|EFJ07541.1| KNOX transcription factor [Selaginella moellendorffii]
          Length = 417

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 82/112 (73%), Gaps = 3/112 (2%)

Query: 39  ASSDEEYSGAETEAQ-DAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESR 97
           A  +E+ S +E   + D  A+DE+  LK+ L +++G++I  LK EF KKKKKGKLPK S 
Sbjct: 293 AEIEEDISSSEVGNEVDPLAKDEN--LKEYLAQRYGAYIKGLKQEFLKKKKKGKLPKHST 350

Query: 98  QTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSEN 149
           + L +WW AH KWPYP+E +K  LA  TGLDQKQINNWFINQRKRHW PSE+
Sbjct: 351 EKLYEWWEAHIKWPYPSEQEKANLATDTGLDQKQINNWFINQRKRHWNPSEH 402


>gi|302819516|ref|XP_002991428.1| hypothetical protein SELMODRAFT_448401 [Selaginella moellendorffii]
 gi|300140821|gb|EFJ07540.1| hypothetical protein SELMODRAFT_448401 [Selaginella moellendorffii]
          Length = 412

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 82/112 (73%), Gaps = 3/112 (2%)

Query: 39  ASSDEEYSGAETEAQ-DAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESR 97
           A  +E+ S +E   + D  A+DE+  LK+ L +++G++I  LK EF KKKKKGKLPK S 
Sbjct: 288 AEIEEDISSSEVGNEVDPLAKDEN--LKEYLAQRYGAYIKGLKQEFLKKKKKGKLPKHST 345

Query: 98  QTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSEN 149
           + L +WW AH KWPYP+E +K  LA  TGLDQKQINNWFINQRKRHW PSE+
Sbjct: 346 EKLYEWWEAHIKWPYPSEQEKANLATDTGLDQKQINNWFINQRKRHWNPSEH 397


>gi|6016228|sp|P56669.1|HLG3_MAIZE RecName: Full=Homeobox protein liguleless 3
          Length = 85

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/84 (67%), Positives = 69/84 (82%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  LL+WWN HY+WPYPTE DK++LA 
Sbjct: 2   LKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPTEEDKVRLAA 61

Query: 124 STGLDQKQINNWFINQRKRHWKPS 147
            TGLD KQINNWFINQRKRHWKPS
Sbjct: 62  MTGLDPKQINNWFINQRKRHWKPS 85


>gi|371767730|gb|AEX56220.1| knotted-like 2 protein [Gymnadenia odoratissima]
          Length = 162

 Score =  105 bits (261), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 3/100 (3%)

Query: 36  DGAASSDEEYSGAE---TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           +   SSDEE S  +   +E  D+ +R  D  LK+ L +K+  ++ SLK EF K  KKGK+
Sbjct: 63  EALGSSDEEPSYGDDDPSEIYDSSSRVPDNELKEMLRKKYSGYLSSLKKEFLKTTKKGKI 122

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           P+++R TLL WWN+HY+WPYPTE +K++LAE TGLDQKQI
Sbjct: 123 PRDARSTLLVWWNSHYQWPYPTEEEKIKLAEQTGLDQKQI 162


>gi|371767720|gb|AEX56215.1| knotted-like 3 protein [Gymnadenia conopsea]
          Length = 142

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 3/100 (3%)

Query: 36  DGAASSDEEYSGAE---TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           +   SSDEE S  +   +E  D+ +R  D  LK+ L +K+  ++ SLK EF K  KKGK+
Sbjct: 43  EALGSSDEEPSYGDDDPSEIYDSSSRVPDNELKEMLRKKYSGYLSSLKKEFLKTTKKGKI 102

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           P+++R TLL WWN+HY+WPYPTE +K++LAE TGLDQKQI
Sbjct: 103 PRDARSTLLVWWNSHYQWPYPTEEEKIKLAEQTGLDQKQI 142


>gi|14456343|gb|AAK62559.1|AF284817_1 class 1 KNOTTED1-like protein MKN4 [Physcomitrella patens]
          Length = 488

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 65/96 (67%), Gaps = 2/96 (2%)

Query: 49  ETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHY 108
           E+   D +A DE+  LK  L  K+G HI  LK EF++ +KKGKLP  +RQ L DW++ H 
Sbjct: 363 ESIVIDPDAADEE--LKKMLRLKYGKHIAGLKAEFNRVRKKGKLPTNARQILKDWFSRHS 420

Query: 109 KWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
            WPYP+E +K  L    GL+ KQINNWFIN+RKRHW
Sbjct: 421 YWPYPSEMEKAYLQRLCGLNLKQINNWFINERKRHW 456


>gi|164454387|dbj|BAF96740.1| knotted-like homeobox transcription factor MKN4 [Physcomitrella
           patens]
          Length = 495

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 65/96 (67%), Gaps = 2/96 (2%)

Query: 49  ETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHY 108
           E+   D +A DE+  LK  L  K+G HI  LK EF++ +KKGKLP  +RQ L DW++ H 
Sbjct: 370 ESIVIDPDAADEE--LKKMLRLKYGKHIAGLKAEFNRVRKKGKLPTNARQILKDWFSRHS 427

Query: 109 KWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
            WPYP+E +K  L    GL+ KQINNWFIN+RKRHW
Sbjct: 428 YWPYPSEMEKAYLQRLCGLNLKQINNWFINERKRHW 463


>gi|398257718|gb|AFO71870.1| STM-like protein 1, partial [Chelidonium majus]
          Length = 138

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 67/79 (84%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           ED+ LK +LLRK+  ++GSLK EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+E  KL
Sbjct: 60  EDKELKIQLLRKYSGYLGSLKQEFLKKRKKGKLPKEARQKLLDWWSRHYKWPYPSEGQKL 119

Query: 120 QLAESTGLDQKQINNWFIN 138
            L E+TGLDQKQINNWFIN
Sbjct: 120 ALGETTGLDQKQINNWFIN 138


>gi|145346212|ref|XP_001417587.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577814|gb|ABO95880.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 244

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 61/87 (70%)

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           RD +  L++ L RK+ S I +LK EF +K+KKGKLP +S + L +WW+ +  WPYPTE D
Sbjct: 158 RDHEERLREALKRKYASSIMTLKSEFMRKRKKGKLPDQSTEVLKNWWSENIVWPYPTEDD 217

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHW 144
           K +L   T LD  Q+NNWFIN RKRHW
Sbjct: 218 KRELIAQTKLDATQVNNWFINFRKRHW 244


>gi|2306991|gb|AAB65798.1| homeobox protein [Oryza officinalis]
          Length = 58

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/58 (79%), Positives = 52/58 (89%)

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           KGKLPK++RQ LL+WW  HYKWPYP+E+ K+ LAESTGLD KQINNWFINQRKRHWKP
Sbjct: 1   KGKLPKDARQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKP 58


>gi|302786492|ref|XP_002975017.1| hypothetical protein SELMODRAFT_415291 [Selaginella moellendorffii]
 gi|300157176|gb|EFJ23802.1| hypothetical protein SELMODRAFT_415291 [Selaginella moellendorffii]
          Length = 336

 Score =  102 bits (254), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/86 (65%), Positives = 65/86 (75%)

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           D+ LK  L++++G +I  L  E+ KKKKKGKLPKESRQ LLDWW+ H   PYP E  K  
Sbjct: 234 DKELKKVLMKRYGGYIKGLTQEYLKKKKKGKLPKESRQQLLDWWSQHQDHPYPNENQKSN 293

Query: 121 LAESTGLDQKQINNWFINQRKRHWKP 146
           LA+STGLD KQINNWFINQRKRHW P
Sbjct: 294 LAQSTGLDPKQINNWFINQRKRHWNP 319


>gi|302791343|ref|XP_002977438.1| KNOX transcription factor [Selaginella moellendorffii]
 gi|300154808|gb|EFJ21442.1| KNOX transcription factor [Selaginella moellendorffii]
          Length = 313

 Score =  102 bits (254), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/86 (65%), Positives = 65/86 (75%)

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           D+ LK  L++++G +I  L  E+ KKKKKGKLPKESRQ LLDWW+ H   PYP E  K  
Sbjct: 211 DKELKKVLMKRYGGYIKGLTQEYLKKKKKGKLPKESRQQLLDWWSQHQDHPYPNENQKSN 270

Query: 121 LAESTGLDQKQINNWFINQRKRHWKP 146
           LA+STGLD KQINNWFINQRKRHW P
Sbjct: 271 LAQSTGLDPKQINNWFINQRKRHWNP 296


>gi|302786494|ref|XP_002975018.1| KNOX transcription factor [Selaginella moellendorffii]
 gi|300157177|gb|EFJ23803.1| KNOX transcription factor [Selaginella moellendorffii]
          Length = 312

 Score =  102 bits (254), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/86 (65%), Positives = 65/86 (75%)

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           D+ LK  L++++G +I  L  E+ KKKKKGKLPKESRQ LLDWW+ H   PYP E  K  
Sbjct: 210 DKELKKVLMKRYGGYIKGLTQEYLKKKKKGKLPKESRQQLLDWWSQHQDHPYPNENQKSN 269

Query: 121 LAESTGLDQKQINNWFINQRKRHWKP 146
           LA+STGLD KQINNWFINQRKRHW P
Sbjct: 270 LAQSTGLDPKQINNWFINQRKRHWNP 295


>gi|33333533|gb|AAQ11883.1| knotted 2 [Hordeum vulgare]
          Length = 159

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 79/112 (70%), Gaps = 4/112 (3%)

Query: 37  GAASSDEEYSGAETEAQDAEAR-DEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           G +S DE+ +G      +  +   ED+ LK  LL K+  ++ SL  + SKKKKKGKLP++
Sbjct: 5   GGSSEDEQETGDVGGLPEITSHCAEDKELKSHLLNKYSGYLSSLWKDLSKKKKKGKLPRD 64

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           +RQ LL WW  HY+WPYP++A    LAESTGLD KQINNWFINQRKRHWKP+
Sbjct: 65  ARQKLLHWWQLHYRWPYPSKA---ALAESTGLDAKQINNWFINQRKRHWKPT 113


>gi|302791345|ref|XP_002977439.1| hypothetical protein SELMODRAFT_451276 [Selaginella moellendorffii]
 gi|300154809|gb|EFJ21443.1| hypothetical protein SELMODRAFT_451276 [Selaginella moellendorffii]
          Length = 307

 Score =  102 bits (253), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/86 (65%), Positives = 65/86 (75%)

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           D+ LK  L++++G +I  L  E+ KKKKKGKLPKESRQ LLDWW+ H   PYP E  K  
Sbjct: 205 DKELKKVLMKRYGGYIKGLTQEYLKKKKKGKLPKESRQQLLDWWSQHQDHPYPNENQKSN 264

Query: 121 LAESTGLDQKQINNWFINQRKRHWKP 146
           LA+STGLD KQINNWFINQRKRHW P
Sbjct: 265 LAQSTGLDPKQINNWFINQRKRHWNP 290


>gi|303283021|ref|XP_003060802.1| knox-like protein [Micromonas pusilla CCMP1545]
 gi|226458273|gb|EEH55571.1| knox-like protein [Micromonas pusilla CCMP1545]
          Length = 338

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 2/93 (2%)

Query: 52  AQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWP 111
           A+  + R++D  L+  L RK+ + I SL+ EF +K+KKGKLP ++ + L  WW+ +  WP
Sbjct: 211 AKHVDTREDD--LRKSLKRKYATSISSLRDEFLRKRKKGKLPTDATEALKKWWSDNVVWP 268

Query: 112 YPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           YP+E DK  L++ST L   QINNWFINQRKRHW
Sbjct: 269 YPSEDDKRALSKSTNLSATQINNWFINQRKRHW 301


>gi|6746353|gb|AAF27530.1| knotted-1 homeobox protein [Avena vaviloviana]
          Length = 58

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 50/58 (86%)

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           KGKLPKE+R  LL WW  H KWPYP+E +K+ LAE+TGLDQKQINNWFINQRKRHWKP
Sbjct: 1   KGKLPKEARLKLLHWWELHSKWPYPSETEKIALAETTGLDQKQINNWFINQRKRHWKP 58


>gi|255084752|ref|XP_002504807.1| knox-like protein [Micromonas sp. RCC299]
 gi|226520076|gb|ACO66065.1| knox-like protein [Micromonas sp. RCC299]
          Length = 470

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 51  EAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKW 110
           E++  + R++D  L+  L RK+ S I +LK EF KK KKGKLP  + +TL +WW A+  W
Sbjct: 341 ESKIPDTREDD--LRKSLKRKYASSILALKDEFLKKTKKGKLPSSATKTLKEWWLANLLW 398

Query: 111 PYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           PYP+E  K  L +  GL+Q QINNWFINQRKRHW
Sbjct: 399 PYPSEDAKRALMKLAGLNQTQINNWFINQRKRHW 432


>gi|326493406|dbj|BAJ85164.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 255

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 68/113 (60%)

Query: 32  SNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           SN  DG   SD    G  TE + +      + LK +L + +   +  ++ E  +K++ GK
Sbjct: 115 SNMFDGNDVSDGMGFGMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGK 174

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           LP ++  TL  WW AH KWPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 175 LPGDTASTLKAWWQAHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 227


>gi|33333542|gb|AAQ11887.1| knotted 7 [Hordeum vulgare]
          Length = 340

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 68/113 (60%)

Query: 32  SNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           SN  DG   SD    G  TE + +      + LK +L + +   +  ++ E  +K++ GK
Sbjct: 170 SNMFDGNDVSDGMGFGMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGK 229

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           LP ++  TL  WW AH KWPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 230 LPGDTASTLKAWWQAHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 282


>gi|326534150|dbj|BAJ89425.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 297

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 68/113 (60%)

Query: 32  SNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           SN  DG   SD    G  TE + +      + LK +L + +   +  ++ E  +K++ GK
Sbjct: 169 SNMFDGNDVSDGMGFGMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGK 228

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           LP ++  TL  WW AH KWPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 229 LPGDTASTLKAWWQAHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 281


>gi|58011287|gb|AAW62518.1| KNOTTED1-like protein [Selaginella kraussiana]
          Length = 315

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 63/87 (72%)

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           D+ +K  L++K+G ++G L  E+ KKKKK KLP  + +TL DWW  H + PYP+EA K  
Sbjct: 209 DKEIKRALMKKYGGYLGGLTQEYLKKKKKSKLPSAATKTLRDWWFQHLEHPYPSEAQKAT 268

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPS 147
           LA +T LD KQINNWFINQRKRHW PS
Sbjct: 269 LAATTKLDPKQINNWFINQRKRHWDPS 295


>gi|356539927|ref|XP_003538444.1| PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max]
          Length = 279

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/116 (43%), Positives = 69/116 (59%)

Query: 29  LKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKK 88
           + FS  +  A   D    G  TE++ +      + LK +L + F S I  ++ E  +K++
Sbjct: 148 MDFSLDQSSAEGHDMMGFGLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRR 207

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
            GKLP ++   L +WW  H KWPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 208 AGKLPGDTTSVLKNWWQQHAKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 263


>gi|255637935|gb|ACU19284.1| unknown [Glycine max]
          Length = 279

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 51/116 (43%), Positives = 69/116 (59%)

Query: 29  LKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKK 88
           + FS  +  A   D    G  TE++ +      + LK +L + F S I  ++ E  +K++
Sbjct: 148 MDFSLDQSSAEGHDMMGFGLPTESERSLMERVRQELKIELKQGFKSKIEDVREEILRKRR 207

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
            GKLP ++   L +WW  H KWPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 208 AGKLPGDTTSVLENWWQQHAKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 263


>gi|302771457|ref|XP_002969147.1| KNOX transcription factor [Selaginella moellendorffii]
 gi|300163652|gb|EFJ30263.1| KNOX transcription factor [Selaginella moellendorffii]
          Length = 287

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 77/146 (52%), Gaps = 14/146 (9%)

Query: 13  SFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEA-------------RD 59
           S F    ++P EG       +  D  A SD  Y  A  +  D                 +
Sbjct: 126 SLFTLTGVSPGEGTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLME 185

Query: 60  EDRH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADK 118
             RH LK +L + + + I  ++ E  +K++ GKLP ++   L  WW+AH KWPYP+E DK
Sbjct: 186 RVRHELKIELKQGYKAKINDVREEILRKRRAGKLPGDTTSVLKTWWHAHSKWPYPSEDDK 245

Query: 119 LQLAESTGLDQKQINNWFINQRKRHW 144
            +L + TGL+ KQINNWFINQRKR+W
Sbjct: 246 ARLVQETGLELKQINNWFINQRKRNW 271


>gi|357114296|ref|XP_003558936.1| PREDICTED: homeobox protein knotted-1-like 3-like [Brachypodium
           distachyon]
          Length = 260

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 56/81 (69%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + F S IG ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L E
Sbjct: 165 LKIELKQGFKSRIGDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVE 224

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 225 ETGLQLKQINNWFINQRKRNW 245


>gi|302784286|ref|XP_002973915.1| KNOX transcription factor [Selaginella moellendorffii]
 gi|300158247|gb|EFJ24870.1| KNOX transcription factor [Selaginella moellendorffii]
          Length = 287

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 77/146 (52%), Gaps = 14/146 (9%)

Query: 13  SFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEA-------------RD 59
           S F    ++P EG       +  D  A SD  Y  A  +  D                 +
Sbjct: 126 SLFTLTGVSPGEGTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLME 185

Query: 60  EDRH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADK 118
             RH LK +L + + + I  ++ E  +K++ GKLP ++   L  WW+AH KWPYP+E DK
Sbjct: 186 RVRHELKIELKQGYKAKINDVREEILRKRRAGKLPGDTTSVLKTWWHAHSKWPYPSEDDK 245

Query: 119 LQLAESTGLDQKQINNWFINQRKRHW 144
            +L + TGL+ KQINNWFINQRKR+W
Sbjct: 246 ARLVQETGLELKQINNWFINQRKRNW 271


>gi|308803302|ref|XP_003078964.1| knotted class 1 homeodomain protein liguleless3 (ISS) [Ostreococcus
           tauri]
 gi|116057417|emb|CAL51844.1| knotted class 1 homeodomain protein liguleless3 (ISS) [Ostreococcus
           tauri]
          Length = 345

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 59/93 (63%)

Query: 52  AQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWP 111
           A + + R+ +  L+  L RK+ S I  LK EF +K+KKGKLP  S   L  WW+ +  WP
Sbjct: 215 ASEHQRRNHEERLRQDLKRKYASSITMLKTEFMRKRKKGKLPDTSTDILKKWWSDNIVWP 274

Query: 112 YPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           YP+E DK  L E T LD  Q+NNWFIN RKRHW
Sbjct: 275 YPSEDDKQVLIEMTKLDATQVNNWFINFRKRHW 307


>gi|326526697|dbj|BAK00737.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 315

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 56/81 (69%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + F S IG ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L E
Sbjct: 220 LKIELKQGFKSRIGDVREEILRKRRAGKLPGDTTTILKQWWQEHAKWPYPTEDDKAKLVE 279

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 280 ETGLQLKQINNWFINQRKRNW 300


>gi|357145509|ref|XP_003573667.1| PREDICTED: homeobox protein knotted-1-like 13-like [Brachypodium
           distachyon]
          Length = 367

 Score = 98.2 bits (243), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 77/138 (55%), Gaps = 14/138 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEEYS-------------GAETEAQDAEARDEDRHLKD 66
           ++P EG TG   S+ +D  A S+                 G  TE++ +      + LK 
Sbjct: 208 VSPGEG-TGATMSDGEDDQADSEANMYDASLDGPDSMGGFGLPTESERSLMERVRQELKH 266

Query: 67  KLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTG 126
           +L + +   +  ++ E  +K++ GKLP ++  TL  WW +H KWPYPTE DK +L + TG
Sbjct: 267 ELKQGYKEKLVDIREEILRKRRAGKLPGDTTSTLKSWWQSHSKWPYPTEEDKARLVQETG 326

Query: 127 LDQKQINNWFINQRKRHW 144
           L  KQINNWFINQRKR+W
Sbjct: 327 LQLKQINNWFINQRKRNW 344


>gi|350535332|ref|NP_001233933.1| homeobox 2 protein [Solanum lycopersicum]
 gi|4098246|gb|AAD00253.1| homeobox 2 protein [Solanum lycopersicum]
          Length = 310

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 63/98 (64%)

Query: 47  GAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNA 106
           G  TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  
Sbjct: 197 GLPTESERSLMERVRQELKIELKQGFRSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQ 256

Query: 107 HYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           H KWPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 257 HSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 294


>gi|254749396|dbj|BAH86594.1| class1 knotted-like homeobox [Selaginella uncinata]
          Length = 302

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/90 (61%), Positives = 65/90 (72%)

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           D+ LK+ L+ KFG  I  L  E  +KKKKGKLPKE+R  L  WW+ H   PYPTE +K Q
Sbjct: 194 DKELKEMLMCKFGGFIKGLNREQLQKKKKGKLPKEARDKLFQWWSEHLDHPYPTEVEKAQ 253

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENM 150
           L E T LD KQINNWFINQRKRHWKPS+++
Sbjct: 254 LCEITRLDAKQINNWFINQRKRHWKPSDDI 283


>gi|148536353|gb|ABQ85729.1| KNOX3, partial [Populus balsamifera]
 gi|148536355|gb|ABQ85730.1| KNOX3, partial [Populus deltoides]
 gi|148536357|gb|ABQ85731.1| KNOX3, partial [Populus maximowiczii]
 gi|148536359|gb|ABQ85732.1| KNOX3, partial [Populus nigra]
 gi|148536361|gb|ABQ85733.1| KNOX3, partial [Populus trichocarpa]
          Length = 59

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/52 (80%), Positives = 47/52 (90%)

Query: 107 HYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
           HYKWPYP+E +K+ LAE+TGLDQKQINNWFINQRKRHWKPSE+M F VMD L
Sbjct: 3   HYKWPYPSETEKVALAETTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL 54


>gi|356530621|ref|XP_003533879.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
          Length = 339

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 13/138 (9%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEEYSG-------------AETEAQDAEARDEDRHLKD 66
           ++P EG       N +D A S+   Y G               TE + +      + LK 
Sbjct: 174 VSPGEGTGATMSDNEEDQAESNANLYEGGMDGADSLSFGPLVPTETERSLMERVRQELKH 233

Query: 67  KLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTG 126
           +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TG
Sbjct: 234 ELKQGYKDKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQETG 293

Query: 127 LDQKQINNWFINQRKRHW 144
           L  KQINNWFINQRKR+W
Sbjct: 294 LQLKQINNWFINQRKRNW 311


>gi|33333540|gb|AAQ11886.1| knotted 6 [Hordeum vulgare]
          Length = 149

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 57/83 (68%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           + LK +L + F S IG ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L
Sbjct: 52  QELKIELKQGFKSRIGDVREEILRKRRAGKLPGDTTTILKQWWQEHAKWPYPTEDDKAKL 111

Query: 122 AESTGLDQKQINNWFINQRKRHW 144
            E TGL  KQINNWFINQRKR+W
Sbjct: 112 VEETGLQLKQINNWFINQRKRNW 134


>gi|374713154|gb|AEX34717.2| KNOX3, partial [Populus laurifolia]
 gi|429345755|gb|AFZ84558.1| KNOX3, partial [Populus alba]
          Length = 57

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/52 (80%), Positives = 47/52 (90%)

Query: 107 HYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
           HYKWPYP+E +K+ LAE+TGLDQKQINNWFINQRKRHWKPSE+M F VMD L
Sbjct: 1   HYKWPYPSETEKVALAETTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL 52


>gi|449452384|ref|XP_004143939.1| PREDICTED: homeobox protein knotted-1-like 7-like [Cucumis sativus]
 gi|449495874|ref|XP_004159970.1| PREDICTED: homeobox protein knotted-1-like 7-like [Cucumis sativus]
          Length = 301

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 2/118 (1%)

Query: 29  LKFSNTKDGAASSDEEYSGA--ETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKK 86
           + FS  + GA + D    G    TE++ +      + LK +L + F S I  ++ E  +K
Sbjct: 168 MDFSLDQSGADAHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRK 227

Query: 87  KKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++ GKLP ++   L +WW  H KWPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 228 RRAGKLPGDTTTVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 285


>gi|1805617|dbj|BAA08552.1| OSH45 [Oryza sativa Japonica Group]
          Length = 375

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 13/136 (9%)

Query: 21  NPSEGCTGLKFSNTKDGAASS-----DEEYSGAE-------TEAQDAEARDEDRHLKDKL 68
           +P EG TG   S+ +D  A S     D    GA+       TE++ +      + LK +L
Sbjct: 217 SPGEG-TGATMSDGEDDQADSEANMYDPSLDGADNMGFGLPTESERSLMERVRQELKHEL 275

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   +  ++ E  +K++ GKLP ++  TL  WW +H KWPYPTE DK +L + TGL 
Sbjct: 276 KQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQ 335

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 336 LKQINNWFINQRKRNW 351


>gi|221272018|sp|Q0J6N4.2|KNOSD_ORYSJ RecName: Full=Homeobox protein knotted-1-like 13; AltName:
           Full=Homeobox protein OSH45
 gi|1805618|dbj|BAA08553.1| OSH45 [Oryza sativa Japonica Group]
          Length = 374

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 13/136 (9%)

Query: 21  NPSEGCTGLKFSNTKDGAASS-----DEEYSGAE-------TEAQDAEARDEDRHLKDKL 68
           +P EG TG   S+ +D  A S     D    GA+       TE++ +      + LK +L
Sbjct: 217 SPGEG-TGATMSDGEDDQADSEANMYDPSLDGADNMGFGLPTESERSLMERVRQELKHEL 275

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   +  ++ E  +K++ GKLP ++  TL  WW +H KWPYPTE DK +L + TGL 
Sbjct: 276 KQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQ 335

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 336 LKQINNWFINQRKRNW 351


>gi|297840209|ref|XP_002887986.1| hypothetical protein ARALYDRAFT_475053 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333827|gb|EFH64245.1| hypothetical protein ARALYDRAFT_475053 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 291

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 181 TESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCK 240

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 241 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 275


>gi|18407708|ref|NP_564805.1| homeobox protein knotted-1-like 7 [Arabidopsis thaliana]
 gi|75309277|sp|Q9FPQ8.1|KNAT7_ARATH RecName: Full=Homeobox protein knotted-1-like 7; AltName:
           Full=Protein IRREGULAR XYLEM 11; AltName: Full=Protein
           KNAT7
 gi|11878230|gb|AAG40858.1|AF308451_1 homeodomain transcription factor KNAT7 [Arabidopsis thaliana]
 gi|109946473|gb|ABG48415.1| At1g62990 [Arabidopsis thaliana]
 gi|332195913|gb|AEE34034.1| homeobox protein knotted-1-like 7 [Arabidopsis thaliana]
          Length = 291

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 181 TESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCK 240

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 241 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 275


>gi|21618231|gb|AAM67281.1| homeodomain-containing protein HD1, putative [Arabidopsis thaliana]
          Length = 283

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 173 TESEKSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCK 232

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 233 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 267


>gi|371767692|gb|AEX56202.1| knotted-like 5 protein [Gymnadenia conopsea]
          Length = 162

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 69/100 (69%), Gaps = 3/100 (3%)

Query: 36  DGAASSDEEYSGAE---TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           +   SSDE+ S  +   +E  D+ +R  +  LK+ L +K+  ++ SLK EF K  KKGK+
Sbjct: 63  EALGSSDEDPSYGDDDPSEIYDSSSRVPENELKEMLRKKYSGYLSSLKKEFLKTTKKGKI 122

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           P+++R TLL WWN+HY+WPYPTE +K++L E T LDQKQI
Sbjct: 123 PRDARSTLLVWWNSHYQWPYPTEEEKIKLVELTRLDQKQI 162


>gi|356495645|ref|XP_003516685.1| PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max]
          Length = 377

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 267 TESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAK 326

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 327 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 361


>gi|9795158|emb|CAC03454.1| HOMEOBOX PROTEIN KNOTTED-1 LIKE 4 (KNAT4) [Arabidopsis thaliana]
          Length = 419

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 12/136 (8%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG TG   S  +D    SD   + G+           TE++ +      + LK +L
Sbjct: 233 VSPGEG-TGATMSEDEDEQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHEL 291

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 292 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQ 351

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 352 LKQINNWFINQRKRNW 367


>gi|26451690|dbj|BAC42940.1| putative homeodomain transcription factor KNAT6 [Arabidopsis
           thaliana]
          Length = 284

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 174 TESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCK 233

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 234 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 268


>gi|28564620|dbj|BAC57787.1| OSH45 [Oryza sativa Japonica Group]
 gi|38175509|dbj|BAD01204.1| OSH45 [Oryza sativa Japonica Group]
          Length = 181

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 13/136 (9%)

Query: 21  NPSEGCTGLKFSNTKDGAASS-----DEEYSGAE-------TEAQDAEARDEDRHLKDKL 68
           +P EG TG   S+ +D  A S     D    GA+       TE++ +      + LK +L
Sbjct: 21  SPGEG-TGATMSDGEDDQADSEANMYDPSLDGADNMGFGLPTESERSLMERVRQELKHEL 79

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   +  ++ E  +K++ GKLP ++  TL  WW +H KWPYPTE DK +L + TGL 
Sbjct: 80  KQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQ 139

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 140 LKQINNWFINQRKRNW 155


>gi|218200874|gb|EEC83301.1| hypothetical protein OsI_28664 [Oryza sativa Indica Group]
 gi|222640286|gb|EEE68418.1| hypothetical protein OsJ_26781 [Oryza sativa Japonica Group]
          Length = 212

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 13/136 (9%)

Query: 21  NPSEGCTGLKFSNTKDGAASS-----DEEYSGAE-------TEAQDAEARDEDRHLKDKL 68
           +P EG TG   S+ +D  A S     D    GA+       TE++ +      + LK +L
Sbjct: 52  SPGEG-TGATMSDGEDDQADSEANMYDPSLDGADNMGFGLPTESERSLMERVRQELKHEL 110

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   +  ++ E  +K++ GKLP ++  TL  WW +H KWPYPTE DK +L + TGL 
Sbjct: 111 KQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQ 170

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 171 LKQINNWFINQRKRNW 186


>gi|8493589|gb|AAF75812.1|AC011000_15 Strong similarity to Homeobox Protein HD1 from Brassica napus
           gi|1170191, and contains a lactate/malate dehydrogenase
           PF|00056 domain [Arabidopsis thaliana]
          Length = 283

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 173 TESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCK 232

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 233 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 267


>gi|1170191|sp|P46606.1|HD1_BRANA RecName: Full=Homeobox protein HD1
 gi|453949|emb|CAA82314.1| homeodomain-containing protein [Brassica napus]
 gi|1090522|prf||2019252A homeobox protein
          Length = 294

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 184 TESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCK 243

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 244 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 278


>gi|297608351|ref|NP_001061467.2| Os08g0292900 [Oryza sativa Japonica Group]
 gi|255678331|dbj|BAF23381.2| Os08g0292900 [Oryza sativa Japonica Group]
          Length = 194

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 13/136 (9%)

Query: 21  NPSEGCTGLKFSNTKDGAASS-----DEEYSGAE-------TEAQDAEARDEDRHLKDKL 68
           +P EG TG   S+ +D  A S     D    GA+       TE++ +      + LK +L
Sbjct: 44  SPGEG-TGATMSDGEDDQADSEANMYDPSLDGADNMGFGLPTESERSLMERVRQELKHEL 102

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   +  ++ E  +K++ GKLP ++  TL  WW +H KWPYPTE DK +L + TGL 
Sbjct: 103 KQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQ 162

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 163 LKQINNWFINQRKRNW 178


>gi|224058619|ref|XP_002299569.1| predicted protein [Populus trichocarpa]
 gi|222846827|gb|EEE84374.1| predicted protein [Populus trichocarpa]
          Length = 293

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 183 TESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSK 242

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 243 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 277


>gi|118481200|gb|ABK92551.1| unknown [Populus trichocarpa]
          Length = 301

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 191 TESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSK 250

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 251 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 285


>gi|302398831|gb|ADL36710.1| HD domain class transcription factor [Malus x domestica]
          Length = 288

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 178 TESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSK 237

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 238 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 272


>gi|357481771|ref|XP_003611171.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
 gi|355512506|gb|AES94129.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
          Length = 305

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 182 TESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAK 241

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 242 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 276


>gi|357481773|ref|XP_003611172.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
 gi|132424657|gb|ABO33481.1| class II KNOX homeobox transcription factor [Medicago truncatula]
 gi|355512507|gb|AES94130.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
          Length = 292

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 182 TESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAK 241

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 242 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 276


>gi|30683467|ref|NP_196667.2| homeobox protein knotted-1-like 4 [Arabidopsis thaliana]
 gi|73915316|sp|P48001.3|KNAT4_ARATH RecName: Full=Homeobox protein knotted-1-like 4; AltName:
           Full=Protein KNAT4
 gi|26451634|dbj|BAC42914.1| putative homeobox protein knotted-1 like4 KNAT4 [Arabidopsis
           thaliana]
 gi|332004247|gb|AED91630.1| homeobox protein knotted-1-like 4 [Arabidopsis thaliana]
          Length = 393

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 12/136 (8%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG TG   S  +D    SD   + G+           TE++ +      + LK +L
Sbjct: 233 VSPGEG-TGATMSEDEDEQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHEL 291

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 292 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQ 351

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 352 LKQINNWFINQRKRNW 367


>gi|413954622|gb|AFW87271.1| putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 316

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 14/137 (10%)

Query: 21  NPSEGCTGLKFSNTKDGAASSDEE-YSGAE------------TEAQDAEARDEDRHLKDK 67
           +P EG TG   S+ +D    S+   + G E            TE + +      + LK +
Sbjct: 153 SPGEG-TGATMSDDEDNQVDSESNMFDGNEGSDGMGFGPLMLTEGERSLVERVRQELKHE 211

Query: 68  LLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGL 127
           L + +   +  ++ E  +K++ GKLP ++  TL  WW AH KWPYPTE DK +L + TGL
Sbjct: 212 LKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGL 271

Query: 128 DQKQINNWFINQRKRHW 144
             KQINNWFINQRKR+W
Sbjct: 272 QLKQINNWFINQRKRNW 288


>gi|1045044|emb|CAA63131.1| KNAT4 homeobox protein [Arabidopsis thaliana]
          Length = 393

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 12/136 (8%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG TG   S  +D    SD   + G+           TE++ +      + LK +L
Sbjct: 233 VSPGEG-TGATMSEDEDEQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHEL 291

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 292 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQ 351

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 352 LKQINNWFINQRKRNW 367


>gi|356563910|ref|XP_003550200.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
          Length = 405

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 15/139 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDE-----EYSGAE---------TEAQDAEARDEDRHLK 65
           ++P EG TG   S+ ++    SD       + GA+         TE++ +      + LK
Sbjct: 252 VSPGEG-TGATMSDDENDQVDSDANLFDCSFDGADSMGFGPLVPTESERSLMERVRQELK 310

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + T
Sbjct: 311 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQET 370

Query: 126 GLDQKQINNWFINQRKRHW 144
           GL  KQINNWFINQRKR+W
Sbjct: 371 GLQLKQINNWFINQRKRNW 389


>gi|115605783|gb|ABJ15868.1| gamete-specific protein minus 1 [Chlamydomonas incerta]
          Length = 892

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/118 (43%), Positives = 66/118 (55%), Gaps = 10/118 (8%)

Query: 37  GAASSDEEYSG-AETEAQDAEAR-DEDR--------HLKDKLLRKFGSHIGSLKLEFSKK 86
           GAAS D    G AE E  D E + D DR         L   +   +GS +  + +  +++
Sbjct: 748 GAASVDTAAGGGAEDEDGDEEGQMDGDRAAAGGEAPQLAASIAATYGSQLVQVAVNLAQR 807

Query: 87  KKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
            K  KLP+ +R+ L  WW  H+ WPYPTE DK QL  +  L+  QINNWFINQRKRHW
Sbjct: 808 PKVAKLPEAARRLLTAWWEQHFVWPYPTEDDKKQLGGAAELNNTQINNWFINQRKRHW 865


>gi|255537235|ref|XP_002509684.1| homeobox protein knotted-1, putative [Ricinus communis]
 gi|223549583|gb|EEF51071.1| homeobox protein knotted-1, putative [Ricinus communis]
          Length = 302

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 62/95 (65%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H K
Sbjct: 192 TESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSK 251

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L E TGL  KQINNWFINQRKR+W
Sbjct: 252 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 286


>gi|1805619|dbj|BAA08554.1| OSH45 [Oryza sativa Japonica Group]
          Length = 171

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 13/136 (9%)

Query: 21  NPSEGCTGLKFSNTKDGAASS-----DEEYSGAE-------TEAQDAEARDEDRHLKDKL 68
           +P EG TG   S+ +D  A S     D    GA+       TE++ +      + LK +L
Sbjct: 21  SPGEG-TGATMSDGEDDQADSEANMYDPSLDGADNMGFGLPTESERSLMERVRQELKHEL 79

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   +  ++ E  +K++ GKLP ++  TL  WW +H KWPYPTE DK +L + TGL 
Sbjct: 80  KQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQ 139

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 140 LKQINNWFINQRKRNW 155


>gi|356562896|ref|XP_003549704.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
          Length = 344

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 15/139 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA-------------ETEAQDAEARDEDRHLK 65
           ++P EG TG   S+ +D  A S+   Y G+              TE++ +        LK
Sbjct: 180 VSPGEG-TGATMSDDEDDQAESNANLYEGSLDGGETLGFGPLVPTESERSLMERVRHELK 238

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + T
Sbjct: 239 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQET 298

Query: 126 GLDQKQINNWFINQRKRHW 144
           GL  KQINNWFINQRKR+W
Sbjct: 299 GLQLKQINNWFINQRKRNW 317


>gi|356548471|ref|XP_003542625.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
          Length = 345

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 15/139 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA-------------ETEAQDAEARDEDRHLK 65
           ++P EG TG   S+ +D  A S+   Y G+              TE++ +        LK
Sbjct: 181 VSPGEG-TGATMSDDEDDQAESNANLYEGSLDGGETLGFGPLVPTESERSLMERVRHELK 239

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + T
Sbjct: 240 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQET 299

Query: 126 GLDQKQINNWFINQRKRHW 144
           GL  KQINNWFINQRKR+W
Sbjct: 300 GLQLKQINNWFINQRKRNW 318


>gi|225426739|ref|XP_002282231.1| PREDICTED: homeobox protein knotted-1-like 7 [Vitis vinifera]
 gi|297742619|emb|CBI34768.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 56/81 (69%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H KWPYPTE DK +L E
Sbjct: 195 LKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVE 254

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 255 ETGLQLKQINNWFINQRKRNW 275


>gi|357466089|ref|XP_003603329.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
 gi|132424659|gb|ABO33482.1| class II KNOX homeobox transcription factor [Medicago truncatula]
 gi|355492377|gb|AES73580.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
          Length = 371

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK +L + +   I  ++ E  +K++ GKLP ++   L DWW +H KWPYPTE DK +
Sbjct: 272 RHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKDWWQSHSKWPYPTEEDKAR 331

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL  KQINNWFINQRKR+W
Sbjct: 332 LVQETGLQLKQINNWFINQRKRNW 355


>gi|297802824|ref|XP_002869296.1| hypothetical protein ARALYDRAFT_328525 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315132|gb|EFH45555.1| hypothetical protein ARALYDRAFT_328525 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 379

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 56/83 (67%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           + LK +L + F   I  ++ E  +K++ GKLP ++   L +WW  H KWPYPTE DK +L
Sbjct: 280 KELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKL 339

Query: 122 AESTGLDQKQINNWFINQRKRHW 144
            + TGL  KQINNWFINQRKR+W
Sbjct: 340 VQETGLQLKQINNWFINQRKRNW 362


>gi|357466091|ref|XP_003603330.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
 gi|355492378|gb|AES73581.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
          Length = 373

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK +L + +   I  ++ E  +K++ GKLP ++   L DWW +H KWPYPTE DK +
Sbjct: 272 RHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKDWWQSHSKWPYPTEEDKAR 331

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL  KQINNWFINQRKR+W
Sbjct: 332 LVQETGLQLKQINNWFINQRKRNW 355


>gi|312283117|dbj|BAJ34424.1| unnamed protein product [Thellungiella halophila]
          Length = 388

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 12/136 (8%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG TG   S  +D    SD   + G+           TE++ +      + LK +L
Sbjct: 228 VSPGEG-TGATMSEDEDEQVDSDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHEL 286

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 287 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQ 346

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 347 LKQINNWFINQRKRNW 362


>gi|15236649|ref|NP_194932.1| homeobox protein knotted-1-like 5 [Arabidopsis thaliana]
 gi|12644283|sp|P48002.2|KNAT5_ARATH RecName: Full=Homeobox protein knotted-1-like 5; AltName:
           Full=Homeodomain-containing protein 1; AltName:
           Full=Protein KNAT5
 gi|17224610|gb|AAL37042.1|AF306661_1 homeodomain transcription factor KNAT5 [Arabidopsis thaliana]
 gi|2506031|dbj|BAA22602.1| homeodomein containing protein 1 [Arabidopsis thaliana]
 gi|3858938|emb|CAA16585.1| homeodomain containing protein 1 [Arabidopsis thaliana]
 gi|7270108|emb|CAB79922.1| homeodomain containing protein 1 [Arabidopsis thaliana]
 gi|109946421|gb|ABG48389.1| At4g32040 [Arabidopsis thaliana]
 gi|332660597|gb|AEE85997.1| homeobox protein knotted-1-like 5 [Arabidopsis thaliana]
          Length = 383

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 56/83 (67%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           + LK +L + F   I  ++ E  +K++ GKLP ++   L +WW  H KWPYPTE DK +L
Sbjct: 280 KELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKL 339

Query: 122 AESTGLDQKQINNWFINQRKRHW 144
            + TGL  KQINNWFINQRKR+W
Sbjct: 340 VQETGLQLKQINNWFINQRKRNW 362


>gi|413957111|gb|AFW89760.1| putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 191

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 56/83 (67%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           + LK +L + F S I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L
Sbjct: 94  QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQQHSKWPYPTEDDKARL 153

Query: 122 AESTGLDQKQINNWFINQRKRHW 144
            E TGL  KQINNWFINQRKR+W
Sbjct: 154 VEETGLQLKQINNWFINQRKRNW 176


>gi|356515190|ref|XP_003526284.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
          Length = 400

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 76/142 (53%), Gaps = 15/142 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA-------------ETEAQDAEARDEDRHLK 65
           ++P EG TG   S+ +D    SD   + GA              TE + +        LK
Sbjct: 246 VSPGEG-TGATMSDDEDEQVDSDANLFDGALDGPDSMGFGPLIPTENERSLMERVRHELK 304

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + T
Sbjct: 305 HELKQGYKDKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQET 364

Query: 126 GLDQKQINNWFINQRKRHWKPS 147
           GL  KQINNWFINQRKR+W  S
Sbjct: 365 GLQLKQINNWFINQRKRNWHSS 386


>gi|312281601|dbj|BAJ33666.1| unnamed protein product [Thellungiella halophila]
          Length = 385

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 56/83 (67%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           + LK +L + F   I  ++ E  +K++ GKLP ++   L +WW  H KWPYPTE DK +L
Sbjct: 283 KELKHELKQGFKEKIEDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKL 342

Query: 122 AESTGLDQKQINNWFINQRKRHW 144
            + TGL  KQINNWFINQRKR+W
Sbjct: 343 VQETGLQLKQINNWFINQRKRNW 365


>gi|356514089|ref|XP_003525739.1| PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max]
          Length = 293

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 55/81 (67%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + F S I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L E
Sbjct: 193 LKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKAWWQQHAKWPYPTEDDKAKLVE 252

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 253 ETGLQLKQINNWFINQRKRNW 273


>gi|414864471|tpg|DAA43028.1| TPA: putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 198

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 56/83 (67%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           + LK +L + F S I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L
Sbjct: 101 QELKMELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKAKL 160

Query: 122 AESTGLDQKQINNWFINQRKRHW 144
            E TGL  KQINNWFINQRKR+W
Sbjct: 161 VEETGLQLKQINNWFINQRKRNW 183


>gi|226532656|ref|NP_001151200.1| LOC100284833 [Zea mays]
 gi|195644982|gb|ACG41959.1| homeobox protein HD1 [Zea mays]
          Length = 315

 Score = 95.1 bits (235), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 55/81 (67%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + F S I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L E
Sbjct: 220 LKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQQHSKWPYPTEDDKARLVE 279

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 280 ETGLQLKQINNWFINQRKRNW 300


>gi|356556581|ref|XP_003546603.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
           3-like [Glycine max]
          Length = 369

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 78/138 (56%), Gaps = 14/138 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEEYS----GAE---------TEAQDAEARDEDRHLKD 66
           ++P EG TG   S+ ++  A S+   S    GA+         TE + +      + LK 
Sbjct: 205 VSPGEG-TGATMSDDEEDQAESNANXSRSMDGADSLSFGPLVPTETERSLMERVRQELKH 263

Query: 67  KLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTG 126
           +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TG
Sbjct: 264 ELKQGYKDKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQETG 323

Query: 127 LDQKQINNWFINQRKRHW 144
           L  KQINNWFINQRKR+W
Sbjct: 324 LQLKQINNWFINQRKRNW 341


>gi|218191994|gb|EEC74421.1| hypothetical protein OsI_09790 [Oryza sativa Indica Group]
 gi|222624111|gb|EEE58243.1| hypothetical protein OsJ_09228 [Oryza sativa Japonica Group]
          Length = 306

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 55/81 (67%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + F S I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L E
Sbjct: 211 LKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVE 270

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 271 ETGLQLKQINNWFINQRKRNW 291


>gi|226531836|ref|NP_001150419.1| homeobox protein HD1 [Zea mays]
 gi|195639114|gb|ACG39025.1| homeobox protein HD1 [Zea mays]
 gi|414864470|tpg|DAA43027.1| TPA: putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 310

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 55/81 (67%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + F S I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L E
Sbjct: 215 LKMELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKAKLVE 274

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 275 ETGLQLKQINNWFINQRKRNW 295


>gi|4887620|dbj|BAA77823.1| HOS66 [Oryza sativa Japonica Group]
 gi|108705928|gb|ABF93723.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 196

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 56/83 (67%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           + LK +L + F S I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L
Sbjct: 99  QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKL 158

Query: 122 AESTGLDQKQINNWFINQRKRHW 144
            E TGL  KQINNWFINQRKR+W
Sbjct: 159 VEETGLQLKQINNWFINQRKRNW 181


>gi|11463943|dbj|BAB18585.1| CRKNOX3 [Ceratopteris richardii]
          Length = 436

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 76/139 (54%), Gaps = 15/139 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEEY---------SGA-----ETEAQDAEARDEDRHLK 65
           ++P EG TG   S+  D  A SD            SGA      TE +        + LK
Sbjct: 283 VSPGEG-TGATMSDDDDDPAESDPSIYDPAFDTHDSGAFGPLIPTETERTLMERVRQELK 341

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
           ++L   +   I  ++ E  +K++ GKLP ++   L  WW+AH KWPYPTE +K +L + T
Sbjct: 342 NELKNGYKDRIVDVREEILRKRRAGKLPGDTTSVLKAWWHAHSKWPYPTEDEKARLVQET 401

Query: 126 GLDQKQINNWFINQRKRHW 144
           GL  KQINNWFINQRKR+W
Sbjct: 402 GLQLKQINNWFINQRKRNW 420


>gi|75306683|sp|Q94LW3.1|KNOS3_ORYSJ RecName: Full=Homeobox protein knotted-1-like 3; AltName:
           Full=Homeobox protein HOS66
 gi|14149141|dbj|BAB55660.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
           Group]
 gi|108705925|gb|ABF93720.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108705927|gb|ABF93722.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 314

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 55/81 (67%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + F S I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L E
Sbjct: 219 LKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVE 278

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 279 ETGLQLKQINNWFINQRKRNW 299


>gi|242060764|ref|XP_002451671.1| hypothetical protein SORBIDRAFT_04g005620 [Sorghum bicolor]
 gi|241931502|gb|EES04647.1| hypothetical protein SORBIDRAFT_04g005620 [Sorghum bicolor]
          Length = 444

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE + +      + LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH K
Sbjct: 197 TEGERSLVERVRQELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSK 256

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 257 WPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 291


>gi|297807137|ref|XP_002871452.1| KNAT4 homeobox protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317289|gb|EFH47711.1| KNAT4 homeobox protein [Arabidopsis lyrata subsp. lyrata]
          Length = 391

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 12/136 (8%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG TG   S  +D    SD   + G+           TE++ +      + LK +L
Sbjct: 231 VSPGEG-TGATMSEDEDEQVESDAPLFDGSLDGLGFGPLVPTESERSLMERVRQELKHEL 289

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 290 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQ 349

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 350 LKQINNWFINQRKRNW 365


>gi|413926367|gb|AFW66299.1| putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 363

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE + +      + LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH K
Sbjct: 254 TEGERSLVERVRKELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSK 313

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 314 WPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 348


>gi|108705926|gb|ABF93721.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215765705|dbj|BAG87402.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 191

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 56/83 (67%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           + LK +L + F S I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L
Sbjct: 94  QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKL 153

Query: 122 AESTGLDQKQINNWFINQRKRHW 144
            E TGL  KQINNWFINQRKR+W
Sbjct: 154 VEETGLQLKQINNWFINQRKRNW 176


>gi|371767712|gb|AEX56211.1| knotted-like 4 protein [Dactylorhiza incarnata]
          Length = 138

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 48/100 (48%), Positives = 68/100 (68%), Gaps = 3/100 (3%)

Query: 36  DGAASSDEEYSGAE---TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKL 92
           +   SSDE+ S  +   +E  D+ +R  +  LK+ L +K   ++ SLK EF K  KKGK+
Sbjct: 39  EALGSSDEDPSYGDDDPSEIHDSSSRVPENELKEMLRKKHSGYLSSLKKEFLKTTKKGKI 98

Query: 93  PKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           P+++R TLL WWN+HY+WPYPTE +K++L E T LDQKQI
Sbjct: 99  PRDARSTLLVWWNSHYQWPYPTEEEKIKLVELTRLDQKQI 138


>gi|115450409|ref|NP_001048805.1| Os03g0123500 [Oryza sativa Japonica Group]
 gi|113547276|dbj|BAF10719.1| Os03g0123500, partial [Oryza sativa Japonica Group]
          Length = 287

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 55/81 (67%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + F S I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L E
Sbjct: 192 LKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVE 251

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 252 ETGLQLKQINNWFINQRKRNW 272


>gi|224142451|ref|XP_002324571.1| predicted protein [Populus trichocarpa]
 gi|222866005|gb|EEF03136.1| predicted protein [Populus trichocarpa]
          Length = 279

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 75/142 (52%), Gaps = 15/142 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEEYSGAE--------------TEAQDAEARDEDRHLK 65
           ++P EG TG   S+ +D  A SD  ++                 TE + +      + LK
Sbjct: 132 VSPGEG-TGATMSDDEDDQAESDTNFNDGNLDGLDTMGFGPLVPTETERSLMERVRQELK 190

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +  + +   I  ++ E  +K++ GKLP ++   L  WW  H KWPYP+E DK +L + T
Sbjct: 191 HEFKQDYKEKIVDIREEILRKRRAGKLPGDTTSHLKAWWQTHSKWPYPSEEDKARLVQET 250

Query: 126 GLDQKQINNWFINQRKRHWKPS 147
           GL  KQINNWFINQRKR+W  S
Sbjct: 251 GLQLKQINNWFINQRKRNWHSS 272


>gi|2306987|gb|AAB65796.1| homeobox protein [Hordeum marinum]
          Length = 58

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/58 (75%), Positives = 48/58 (82%)

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           KGKLPKE+RQ LL WW  H K PYP+E +K+ L ESTGLDQKQINNWFINQRKRH KP
Sbjct: 1   KGKLPKEARQKLLHWWELHSKSPYPSETEKMALGESTGLDQKQINNWFINQRKRHCKP 58


>gi|356507510|ref|XP_003522507.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
          Length = 411

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 75/139 (53%), Gaps = 15/139 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA-------------ETEAQDAEARDEDRHLK 65
           ++P EG TG   S+ +D    SD   + GA              TE + +        LK
Sbjct: 257 VSPGEG-TGATMSDEEDEQVDSDANLFDGALDGPDSMGFGPLIPTENERSLMERVRHELK 315

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + T
Sbjct: 316 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQET 375

Query: 126 GLDQKQINNWFINQRKRHW 144
           GL  KQINNWFINQRKR+W
Sbjct: 376 GLQLKQINNWFINQRKRNW 394


>gi|336112103|gb|AEI17370.1| knox-like protein 3 [Arabidopsis lyrata]
          Length = 441

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 12/136 (8%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG  G   S+ +D    SD   + G+           TE++ +      + LK +L
Sbjct: 267 VSPGEGM-GATMSDDEDEQVESDANLFDGSLDVLGFGPLVPTESERSLMERVRQELKHEL 325

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 326 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQ 385

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 386 LKQINNWFINQRKRNW 401


>gi|115469202|ref|NP_001058200.1| Os06g0646600 [Oryza sativa Japonica Group]
 gi|14149139|dbj|BAB55659.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
           Group]
 gi|51535417|dbj|BAD37316.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
           Group]
 gi|51535639|dbj|BAD37613.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
           Group]
 gi|113596240|dbj|BAF20114.1| Os06g0646600 [Oryza sativa Japonica Group]
          Length = 317

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 32  SNTKDGAASSDEEYSG--AETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKK 89
           SN  DG   SD    G    TE + +      + LK +L + +   +  ++ E  +K++ 
Sbjct: 181 SNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRA 240

Query: 90  GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           GKLP ++  TL  WW AH KWPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 241 GKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 295


>gi|357123228|ref|XP_003563314.1| PREDICTED: homeobox protein knotted-1-like 2-like [Brachypodium
           distachyon]
          Length = 317

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 32  SNTKDGAASSDEEYSGAE--TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKK 89
           SN  DG   SD    G    TE + +      + LK +L + +   +  ++ E  +K++ 
Sbjct: 175 SNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLIDIREEILRKRRA 234

Query: 90  GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           GKLP ++  TL  WW AH KWPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 235 GKLPGDTASTLKAWWQAHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 289


>gi|357115634|ref|XP_003559593.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
           4-like [Brachypodium distachyon]
          Length = 314

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 75/112 (66%), Gaps = 4/112 (3%)

Query: 36  DGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKE 95
           +G AS+++E    +      +A +    LKD+ L K   ++ SL  + SKKK KGKLP  
Sbjct: 171 EGEASTEDEQEIGDVGGLPVQAAE----LKDQFLNKHNGYLSSLWRKLSKKKTKGKLPSG 226

Query: 96  SRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           +RQ L  WW  +++ PYP+E +K  LAESTGLD+KQINNWFINQRKRHWKP+
Sbjct: 227 ARQKLQQWWRLNWRSPYPSELEKAALAESTGLDRKQINNWFINQRKRHWKPT 278


>gi|357138416|ref|XP_003570788.1| PREDICTED: homeobox protein knotted-1-like 2-like [Brachypodium
           distachyon]
          Length = 304

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK +L + +   +  ++ E  +K++ GKLP ++  TL  WW AH KWPYPTE DK +
Sbjct: 205 RHELKSELKQGYKEKLVDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPTEDDKAR 264

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL  KQINNWFINQRKR+W
Sbjct: 265 LVQETGLQLKQINNWFINQRKRNW 288


>gi|413926368|gb|AFW66300.1| putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 328

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE + +      + LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH K
Sbjct: 194 TEGERSLVERVRKELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSK 253

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 254 WPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 288


>gi|359475858|ref|XP_002285407.2| PREDICTED: homeobox protein knotted-1-like 3-like [Vitis vinifera]
          Length = 415

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 77/139 (55%), Gaps = 15/139 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDE-----EYSGAE---------TEAQDAEARDEDRHLK 65
           ++P EG TG   S+ ++    SD         GA+         TE++ +      + LK
Sbjct: 262 VSPGEG-TGATMSDDEEDQIDSDANLFDGSLEGADSMGFGPLVPTESERSLMERVRQELK 320

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + T
Sbjct: 321 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKAKLVQET 380

Query: 126 GLDQKQINNWFINQRKRHW 144
           GL  KQINNWFINQRKR+W
Sbjct: 381 GLQLKQINNWFINQRKRNW 399


>gi|413935911|gb|AFW70462.1| putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 310

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE + +      + LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH K
Sbjct: 191 TEGERSLVERVRQELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSK 250

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 251 WPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 285


>gi|195619568|gb|ACG31614.1| homeobox protein knotted-1-like 3 [Zea mays]
          Length = 298

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE + +      + LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH K
Sbjct: 189 TEGERSLVERVRKELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSK 248

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 249 WPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 283


>gi|162458143|ref|NP_001105852.1| KNOX family class 2 homeodomain protein [Zea mays]
 gi|126153888|emb|CAJ58046.2| KNOX family class 2 homeodomain protein [Zea mays]
          Length = 304

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE + +      + LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH K
Sbjct: 195 TEGERSLVERVRKELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSK 254

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 255 WPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 289


>gi|297808523|ref|XP_002872145.1| hypothetical protein ARALYDRAFT_489374 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317982|gb|EFH48404.1| hypothetical protein ARALYDRAFT_489374 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 429

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 12/136 (8%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG  G   S+ +D    SD   + G+           TE++ +      + LK +L
Sbjct: 267 VSPGEGM-GATMSDDEDEQVESDANLFDGSLDVLGFGPLVPTESERSLMERVRQELKHEL 325

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 326 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQ 385

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 386 LKQINNWFINQRKRNW 401


>gi|302784284|ref|XP_002973914.1| hypothetical protein SELMODRAFT_173857 [Selaginella moellendorffii]
 gi|300158246|gb|EFJ24869.1| hypothetical protein SELMODRAFT_173857 [Selaginella moellendorffii]
          Length = 363

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK +L + + + I  ++ E  +K++ GKLP ++   L  WW+AH KWPYP+E DK +
Sbjct: 264 RHELKIELKQGYKAKINDVREEILRKRRAGKLPGDTTSVLKTWWHAHSKWPYPSEDDKAR 323

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL+ KQINNWFINQRKR+W
Sbjct: 324 LVQETGLELKQINNWFINQRKRNW 347


>gi|14090235|dbj|BAA77822.2| HOS59 [Oryza sativa Japonica Group]
          Length = 178

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 32  SNTKDGAASSDEEYSG--AETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKK 89
           SN  DG   SD    G    TE + +      + LK +L + +   +  ++ E  +K++ 
Sbjct: 42  SNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRA 101

Query: 90  GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           GKLP ++  TL  WW AH KWPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 102 GKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 156


>gi|221272019|sp|Q94LW4.2|KNOSB_ORYSJ RecName: Full=Homeobox protein knotted-1-like 11; AltName:
           Full=Homeobox protein HOS59
 gi|215768803|dbj|BAH01032.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 323

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 32  SNTKDGAASSDEEYSG--AETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKK 89
           SN  DG   SD    G    TE + +      + LK +L + +   +  ++ E  +K++ 
Sbjct: 181 SNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRA 240

Query: 90  GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           GKLP ++  TL  WW AH KWPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 241 GKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 295


>gi|218198650|gb|EEC81077.1| hypothetical protein OsI_23897 [Oryza sativa Indica Group]
          Length = 323

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 32  SNTKDGAASSDEEYSG--AETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKK 89
           SN  DG   SD    G    TE + +      + LK +L + +   +  ++ E  +K++ 
Sbjct: 181 SNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRA 240

Query: 90  GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           GKLP ++  TL  WW AH KWPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 241 GKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 295


>gi|296082096|emb|CBI21101.3| unnamed protein product [Vitis vinifera]
          Length = 219

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 77/139 (55%), Gaps = 15/139 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDE-----EYSGAE---------TEAQDAEARDEDRHLK 65
           ++P EG TG   S+ ++    SD         GA+         TE++ +      + LK
Sbjct: 54  VSPGEG-TGATMSDDEEDQIDSDANLFDGSLEGADSMGFGPLVPTESERSLMERVRQELK 112

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + T
Sbjct: 113 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKAKLVQET 172

Query: 126 GLDQKQINNWFINQRKRHW 144
           GL  KQINNWFINQRKR+W
Sbjct: 173 GLQLKQINNWFINQRKRNW 191


>gi|302771459|ref|XP_002969148.1| hypothetical protein SELMODRAFT_451277 [Selaginella moellendorffii]
 gi|300163653|gb|EFJ30264.1| hypothetical protein SELMODRAFT_451277 [Selaginella moellendorffii]
          Length = 293

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK +L + + + I  ++ E  +K++ GKLP ++   L  WW+AH KWPYP+E DK +
Sbjct: 194 RHELKIELKQGYKAKINDVREEILRKRRAGKLPGDTTSVLKTWWHAHSKWPYPSEDDKAR 253

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL+ KQINNWFINQRKR+W
Sbjct: 254 LVQETGLELKQINNWFINQRKRNW 277


>gi|293334789|ref|NP_001169973.1| putative knotted-like transcription factor family protein [Zea
           mays]
 gi|224032663|gb|ACN35407.1| unknown [Zea mays]
 gi|413935912|gb|AFW70463.1| putative knotted-like transcription factor family protein [Zea
           mays]
          Length = 300

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE + +      + LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH K
Sbjct: 191 TEGERSLVERVRQELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSK 250

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 251 WPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 285


>gi|312282373|dbj|BAJ34052.1| unnamed protein product [Thellungiella halophila]
          Length = 434

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 12/136 (8%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG  G   S+ +D    SD   + G            TE++ +      + LK +L
Sbjct: 272 VSPGEGM-GATMSDDEDEQVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHEL 330

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 331 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQ 390

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 391 LKQINNWFINQRKRNW 406


>gi|79328660|ref|NP_001031938.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
 gi|332006031|gb|AED93414.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
          Length = 419

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 12/136 (8%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG  G   S+ +D    SD   + G            TE++ +      + LK +L
Sbjct: 269 VSPGEGM-GATMSDDEDEQVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHEL 327

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 328 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQ 387

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 388 LKQINNWFINQRKRNW 403


>gi|21539535|gb|AAM53320.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
 gi|23197862|gb|AAN15458.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
          Length = 306

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 12/136 (8%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG  G   S+ +D    SD   + G            TE++ +      + LK +L
Sbjct: 144 VSPGEG-MGATMSDDEDEQVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHEL 202

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 203 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQ 262

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 263 LKQINNWFINQRKRNW 278


>gi|289655990|gb|ADD14043.1| class 2 KNOTTED-like transcription factor KNOPE4 [Prunus persica]
          Length = 358

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 248 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSK 307

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 308 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 342


>gi|126644759|gb|ABO26062.1| KNOPE4 [Prunus persica]
          Length = 417

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 307 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSK 366

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 367 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 401


>gi|222635984|gb|EEE66116.1| hypothetical protein OsJ_22154 [Oryza sativa Japonica Group]
          Length = 256

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 32  SNTKDGAASSDEEYSG--AETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKK 89
           SN  DG   SD    G    TE + +      + LK +L + +   +  ++ E  +K++ 
Sbjct: 112 SNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRA 171

Query: 90  GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           GKLP ++  TL  WW AH KWPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 172 GKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 226


>gi|21554222|gb|AAM63298.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
          Length = 431

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 12/136 (8%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG  G   S+ +D    SD   + G            TE++ +      + LK +L
Sbjct: 269 VSPGEGM-GATMSDDEDEQVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHEL 327

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 328 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQ 387

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 388 LKQINNWFINQRKRNW 403


>gi|85361943|emb|CAJ58045.1| KNOX family class 2 homeodomain protein [Zea mays]
          Length = 171

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE + +      + LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH K
Sbjct: 62  TEGERSLVERVRKELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSK 121

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 122 WPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 156


>gi|15238743|ref|NP_197904.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
 gi|1346387|sp|P48000.1|KNAT3_ARATH RecName: Full=Homeobox protein knotted-1-like 3; AltName:
           Full=Protein KNAT3
 gi|1045042|emb|CAA63130.1| KNAT3 homeobox protein [Arabidopsis thaliana]
 gi|4063731|gb|AAC98441.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
 gi|332006030|gb|AED93413.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
          Length = 431

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 12/136 (8%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG  G   S+ +D    SD   + G            TE++ +      + LK +L
Sbjct: 269 VSPGEGM-GATMSDDEDEQVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHEL 327

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 328 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQ 387

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 388 LKQINNWFINQRKRNW 403


>gi|225463014|ref|XP_002265494.1| PREDICTED: homeobox protein knotted-1-like 3 [Vitis vinifera]
          Length = 430

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 76/139 (54%), Gaps = 15/139 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASS-----DEEYSGAE---------TEAQDAEARDEDRHLK 65
           ++P EG TG   S+ +D  A S     D    G +         TE + +      + LK
Sbjct: 277 VSPGEG-TGATMSDDEDDQADSEINLFDGSLDGPDSMGFGPLVPTETERSLMERVRQELK 335

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + T
Sbjct: 336 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQET 395

Query: 126 GLDQKQINNWFINQRKRHW 144
           GL  KQINNWFINQRKR+W
Sbjct: 396 GLHLKQINNWFINQRKRNW 414


>gi|5802260|gb|AAD51632.1|AF170172_1 KNOX1 homeodomain protein [Acetabularia acetabulum]
          Length = 382

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 52/77 (67%)

Query: 68  LLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGL 127
           L +K+   + +LK EFSK+KK+GKLP  S + L  WW  H  WPYPT++ K  LA  T L
Sbjct: 198 LKQKYRQELLALKEEFSKRKKRGKLPTHSIEVLKSWWKEHIAWPYPTDSAKRSLASQTNL 257

Query: 128 DQKQINNWFINQRKRHW 144
              QINNWFINQRKRHW
Sbjct: 258 TSIQINNWFINQRKRHW 274


>gi|296084578|emb|CBI25599.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 76/139 (54%), Gaps = 15/139 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASS-----DEEYSGAE---------TEAQDAEARDEDRHLK 65
           ++P EG TG   S+ +D  A S     D    G +         TE + +      + LK
Sbjct: 249 VSPGEG-TGATMSDDEDDQADSEINLFDGSLDGPDSMGFGPLVPTETERSLMERVRQELK 307

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + T
Sbjct: 308 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQET 367

Query: 126 GLDQKQINNWFINQRKRHW 144
           GL  KQINNWFINQRKR+W
Sbjct: 368 GLHLKQINNWFINQRKRNW 386


>gi|323388713|gb|ADX60161.1| ORPHAN transcription factor [Zea mays]
          Length = 171

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE + +      + LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH K
Sbjct: 62  TEGERSLVERVRQELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSK 121

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 122 WPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 156


>gi|255548818|ref|XP_002515465.1| homeobox protein knotted-1, putative [Ricinus communis]
 gi|223545409|gb|EEF46914.1| homeobox protein knotted-1, putative [Ricinus communis]
          Length = 456

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +
Sbjct: 327 RHELKHELKQGYKEKIADIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKAR 386

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL  KQINNWFINQRKR+W
Sbjct: 387 LVQETGLQLKQINNWFINQRKRNW 410


>gi|238005954|gb|ACR34012.1| unknown [Zea mays]
          Length = 194

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE + +      + LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH K
Sbjct: 85  TEGERSLVERVRQELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSK 144

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 145 WPYPTEDDKARLVQETGLQLKQINNWFINQRKRNW 179


>gi|302822119|ref|XP_002992719.1| KNOX transcription factor [Selaginella moellendorffii]
 gi|302823878|ref|XP_002993587.1| KNOX transcription factor [Selaginella moellendorffii]
 gi|300138599|gb|EFJ05362.1| KNOX transcription factor [Selaginella moellendorffii]
 gi|300139460|gb|EFJ06200.1| KNOX transcription factor [Selaginella moellendorffii]
          Length = 304

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 58/81 (71%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + + + I  ++ E  +K++ GKLP ++   L  WW+AH KWPYPTE +K +L +
Sbjct: 206 LKHELKQGYRARIVDVREEILRKRRAGKLPGDTTSVLKAWWHAHSKWPYPTEDEKARLVQ 265

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL+ KQINNWFINQRKR+W
Sbjct: 266 ETGLELKQINNWFINQRKRNW 286


>gi|25446694|gb|AAN74841.1| Putative homeobox gene [Oryza sativa Japonica Group]
          Length = 143

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 56/83 (67%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           + LK +L + F S I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L
Sbjct: 46  QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKL 105

Query: 122 AESTGLDQKQINNWFINQRKRHW 144
            E TGL  KQINNWFINQRKR+W
Sbjct: 106 VEETGLQLKQINNWFINQRKRNW 128


>gi|167178664|gb|ABZ10963.1| class 1 knox protein [Kalanchoe x houghtonii]
          Length = 408

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 298 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSK 357

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 358 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 392


>gi|125581054|gb|EAZ21985.1| hypothetical protein OsJ_05640 [Oryza sativa Japonica Group]
          Length = 281

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH KWPYPTE DK +
Sbjct: 163 RHELKNELKQGYKEKLVDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKAR 222

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL  KQINNWFINQRKR+W
Sbjct: 223 LVQETGLQLKQINNWFINQRKRNW 246


>gi|302398851|gb|ADL36720.1| HD domain class transcription factor [Malus x domestica]
          Length = 371

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 250 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSK 309

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 310 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 344


>gi|221272028|sp|Q0E3C3.2|KNOS2_ORYSJ RecName: Full=Homeobox protein knotted-1-like 2; AltName:
           Full=Homeobox protein HOS58
 gi|215769326|dbj|BAH01555.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 313

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH KWPYPTE DK +
Sbjct: 203 RHELKNELKQGYKEKLVDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKAR 262

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL  KQINNWFINQRKR+W
Sbjct: 263 LVQETGLQLKQINNWFINQRKRNW 286


>gi|58011289|gb|AAW62519.1| KNOTTED1-like protein [Selaginella kraussiana]
          Length = 363

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 57/81 (70%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L   + + I  ++ E  +K++ GKLP ++   L  WW+AH KWPYPTE +K +L +
Sbjct: 265 LKHELKHGYRARIVDVRXEILRKRRAGKLPGDTTSVLKAWWHAHSKWPYPTEDEKARLVQ 324

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL+ KQINNWFINQRKR+W
Sbjct: 325 ETGLELKQINNWFINQRKRNW 345


>gi|294460668|gb|ADE75908.1| unknown [Picea sitchensis]
          Length = 174

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 57/81 (70%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + + S I  ++ E  +K++ GKLP ++   L +WW AH KWPYPTE +K +L +
Sbjct: 78  LKHELKQGYRSRIEDIREEILRKRRAGKLPGDTTSVLKNWWQAHSKWPYPTEDEKTRLVQ 137

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 138 ETGLQLKQINNWFINQRKRNW 158


>gi|3116212|dbj|BAA25921.1| NTH23 [Nicotiana tabacum]
          Length = 422

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 13/137 (9%)

Query: 20  INPSEGCTGLKFSNTKDGAASS------------DEEYSGAETEAQDAEARDEDRHLKDK 67
           ++P EG TG   S+ +D    S            D    G  TE++ +      + LK  
Sbjct: 271 VSPGEG-TGATMSDDEDDQVDSEANLFDGSLDGHDGMAFGLPTESERSLMERVRQELKHD 329

Query: 68  LLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGL 127
           L + +   +  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL
Sbjct: 330 LKQGYKEKLVDIREEILRKRRAGKLPGDTTSVLKAWWQSHAKWPYPTEEDKAKLVQETGL 389

Query: 128 DQKQINNWFINQRKRHW 144
             KQINNWFINQRKR W
Sbjct: 390 QLKQINNWFINQRKRDW 406


>gi|329757149|gb|AEC04754.1| knotted-like homeobox KNOX5 [Fragaria vesca]
          Length = 368

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 15/139 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA-------------ETEAQDAEARDEDRHLK 65
           ++P EG TG   S+  +    SD   + G+              TE++ +      + LK
Sbjct: 147 VSPGEG-TGATMSDDDEEQVDSDANLFDGSMDGHDSMGFGPLIPTESERSLMERVRQELK 205

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + T
Sbjct: 206 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQET 265

Query: 126 GLDQKQINNWFINQRKRHW 144
           GL  KQINNWFINQRKR+W
Sbjct: 266 GLQLKQINNWFINQRKRNW 284


>gi|412988463|emb|CCO17799.1| predicted protein [Bathycoccus prasinos]
          Length = 529

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 66/124 (53%), Gaps = 13/124 (10%)

Query: 34  TKDGAASSDEEYSGAETEAQDAEARDEDRH-------------LKDKLLRKFGSHIGSLK 80
           T  GAAS   +    E E +  + +D D                +++LL K+   I +L+
Sbjct: 361 TATGAASKKRKQGAEEAEKETVDGQDSDEDDRSFQLSMKSDEAFRNQLLAKYKDDIPALE 420

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
            E+  KK KGKLPKE+   L  +WN    WPYPTE DK  +   T LD  QINNWFINQR
Sbjct: 421 EEWLNKKPKGKLPKEALIVLKQFWNKKICWPYPTEEDKAAIKAKTTLDATQINNWFINQR 480

Query: 141 KRHW 144
           KRHW
Sbjct: 481 KRHW 484


>gi|363806766|ref|NP_001242278.1| uncharacterized protein LOC100782179 [Glycine max]
 gi|255635799|gb|ACU18248.1| unknown [Glycine max]
          Length = 292

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 54/81 (66%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + F S I  ++ E  +K++ GKLP  +   L  WW  H KWPYPTE DK +L E
Sbjct: 192 LKIELKQGFKSRIEDVREEILRKRRAGKLPGATTSVLKAWWQQHAKWPYPTEDDKAKLVE 251

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  +QINNWFINQRKR+W
Sbjct: 252 ETGLQLEQINNWFINQRKRNW 272


>gi|115454553|ref|NP_001050877.1| Os03g0673000 [Oryza sativa Japonica Group]
 gi|5103731|dbj|BAA79227.1| knotted1-type homeobox protein OSH10 [Oryza sativa]
 gi|113549348|dbj|BAF12791.1| Os03g0673000, partial [Oryza sativa Japonica Group]
          Length = 77

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/76 (65%), Positives = 59/76 (77%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK  LL K+  ++ SL  E SKKKKKGKLP+++RQ LL WW  HY+WPYP+E +K  LAE
Sbjct: 2   LKSHLLNKYSGYLSSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAE 61

Query: 124 STGLDQKQINNWFINQ 139
           STGLD KQINNWFINQ
Sbjct: 62  STGLDAKQINNWFINQ 77


>gi|255565117|ref|XP_002523551.1| homeobox protein knotted-1, putative [Ricinus communis]
 gi|223537258|gb|EEF38890.1| homeobox protein knotted-1, putative [Ricinus communis]
          Length = 374

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 61/98 (62%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE + +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 227 TETERSLMEHVRKELKHELKQDYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHAK 286

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W  S
Sbjct: 287 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSS 324


>gi|302822121|ref|XP_002992720.1| hypothetical protein SELMODRAFT_450988 [Selaginella moellendorffii]
 gi|302823880|ref|XP_002993588.1| hypothetical protein SELMODRAFT_451281 [Selaginella moellendorffii]
 gi|300138600|gb|EFJ05363.1| hypothetical protein SELMODRAFT_451281 [Selaginella moellendorffii]
 gi|300139461|gb|EFJ06201.1| hypothetical protein SELMODRAFT_450988 [Selaginella moellendorffii]
          Length = 275

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 58/81 (71%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + + + I  ++ E  +K++ GKLP ++   L  WW+AH KWPYPTE +K +L +
Sbjct: 177 LKHELKQGYRARIVDVREEILRKRRAGKLPGDTTSVLKAWWHAHSKWPYPTEDEKARLVQ 236

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL+ KQINNWFINQRKR+W
Sbjct: 237 ETGLELKQINNWFINQRKRNW 257


>gi|4098244|gb|AAD09582.1| homeobox 1 protein, partial [Solanum lycopersicum]
          Length = 392

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 276 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSK 335

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +LA  TGL  KQINNWFINQRKR+W
Sbjct: 336 WPYPTEEDKARLARETGLQLKQINNWFINQRKRNW 370


>gi|449441886|ref|XP_004138713.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
          Length = 462

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK +L   +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +
Sbjct: 351 RHELKHELKNGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKAK 410

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL  KQINNWFINQRKR+W
Sbjct: 411 LVQETGLQLKQINNWFINQRKRNW 434


>gi|14090233|dbj|BAA77821.2| HOS58 [Oryza sativa Japonica Group]
          Length = 183

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH KWPYPTE DK +
Sbjct: 73  RHELKNELKQGYKEKLVDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKAR 132

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL  KQINNWFINQRKR+W
Sbjct: 133 LVQETGLQLKQINNWFINQRKRNW 156


>gi|449527309|ref|XP_004170654.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
          Length = 461

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK +L   +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +
Sbjct: 351 RHELKHELKNGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKAK 410

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL  KQINNWFINQRKR+W
Sbjct: 411 LVQETGLQLKQINNWFINQRKRNW 434


>gi|168026109|ref|XP_001765575.1| KNOX class 2 protein MKN6 [Physcomitrella patens subsp. patens]
 gi|162683213|gb|EDQ69625.1| KNOX class 2 protein MKN6 [Physcomitrella patens subsp. patens]
          Length = 518

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 57/81 (70%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + + S I  ++ E  +K++ GKLP+ +   L  WW AH KWPYPTE +K QL +
Sbjct: 420 LKHELKQGYRSKIEDVREEILRKRRAGKLPEGTTTVLKAWWQAHSKWPYPTEDEKEQLIQ 479

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL+ KQ+NNWFINQRKR+W
Sbjct: 480 ETGLELKQVNNWFINQRKRNW 500


>gi|224092536|ref|XP_002309651.1| predicted protein [Populus trichocarpa]
 gi|222855627|gb|EEE93174.1| predicted protein [Populus trichocarpa]
          Length = 177

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 13/138 (9%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEEYSGA-------------ETEAQDAEARDEDRHLKD 66
           ++P EG       + +D   S    + G+              TE++ +      + LK 
Sbjct: 20  VSPGEGTGATMSDDDEDQVDSEANMFDGSLEGVDTMGFGPLVPTESERSLMERVRQELKH 79

Query: 67  KLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTG 126
           +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TG
Sbjct: 80  ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETG 139

Query: 127 LDQKQINNWFINQRKRHW 144
           L  KQINNWFINQRKR+W
Sbjct: 140 LQLKQINNWFINQRKRNW 157


>gi|371767714|gb|AEX56212.1| knotted-like 4 protein [Gymnadenia conopsea]
          Length = 142

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 61/72 (84%)

Query: 61  DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           DR LK +LLRK+  ++GSLK EF KK+KKGKLPKE+RQ LLDWW  HYKWPYP+E+ KL 
Sbjct: 71  DRELKGQLLRKYSGYLGSLKQEFLKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKLA 130

Query: 121 LAESTGLDQKQI 132
           LAESTGLDQKQI
Sbjct: 131 LAESTGLDQKQI 142


>gi|224143241|ref|XP_002324890.1| predicted protein [Populus trichocarpa]
 gi|222866324|gb|EEF03455.1| predicted protein [Populus trichocarpa]
          Length = 426

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 304 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSK 363

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 364 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 398


>gi|111038269|gb|ABH03531.1| class II knotted-like homeobox protein [Prunus persica]
 gi|215983122|gb|ACJ71731.1| class II knotted-like homeobox transcription factor [Prunus
           persica]
          Length = 448

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 326 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSK 385

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 386 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 420


>gi|115444643|ref|NP_001046101.1| Os02g0182800 [Oryza sativa Japonica Group]
 gi|14149137|dbj|BAB55658.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
           Group]
 gi|113535632|dbj|BAF08015.1| Os02g0182800, partial [Oryza sativa Japonica Group]
          Length = 212

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH KWPYPTE DK +
Sbjct: 102 RHELKNELKQGYKEKLVDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKAR 161

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL  KQINNWFINQRKR+W
Sbjct: 162 LVQETGLQLKQINNWFINQRKRNW 185


>gi|3023961|sp|O04136.1|KNAP3_MALDO RecName: Full=Homeobox protein knotted-1-like 3; AltName:
           Full=KNAP3
 gi|1946222|emb|CAA96512.1| knotted1-like homeobox protein [Malus x domestica]
          Length = 427

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 317 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSK 376

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 377 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 411


>gi|302398827|gb|ADL36708.1| HD domain class transcription factor [Malus x domestica]
          Length = 427

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 317 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSK 376

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 377 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 411


>gi|356552494|ref|XP_003544602.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
          Length = 407

 Score = 92.8 bits (229), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 15/139 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASS-----DEEYSGAE---------TEAQDAEARDEDRHLK 65
           ++P EG TG   S+ +D    S     D  + GA+         TE++ +      + LK
Sbjct: 254 VSPGEG-TGATMSDDEDDQVDSDANLFDSSFDGADGMGFGPLVPTESERSLMERVRQELK 312

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + T
Sbjct: 313 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQET 372

Query: 126 GLDQKQINNWFINQRKRHW 144
           GL  KQINNWFINQRKR+W
Sbjct: 373 GLQLKQINNWFINQRKRNW 391


>gi|449455557|ref|XP_004145519.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
 gi|449485171|ref|XP_004157089.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
          Length = 455

 Score = 92.8 bits (229), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 60/95 (63%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L   +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 345 TESERSLMERVRQELKHELKSGYKEKIVDIREEILRKRRAGKLPGDTTSVLKQWWQSHSK 404

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 405 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 439


>gi|365222902|gb|AEW69803.1| Hop-interacting protein THI041 [Solanum lycopersicum]
          Length = 430

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 314 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSK 373

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 374 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 408


>gi|302398821|gb|ADL36705.1| HD domain class transcription factor [Malus x domestica]
          Length = 437

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 60/95 (63%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP  +   L  WW +H K
Sbjct: 327 TESERSLMERVRQELKHELKQGYKEKIVDIREEIMRKRRAGKLPGNTTSVLKAWWQSHSK 386

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 387 WPYPTEEDKARLVQETGLHLKQINNWFINQRKRNW 421


>gi|224091647|ref|XP_002309315.1| predicted protein [Populus trichocarpa]
 gi|222855291|gb|EEE92838.1| predicted protein [Populus trichocarpa]
          Length = 279

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 56/86 (65%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L
Sbjct: 187 QELKHELKQDYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQTHSKWPYPTEEDKARL 246

Query: 122 AESTGLDQKQINNWFINQRKRHWKPS 147
            + TGL  KQINNWFINQRKR+W  S
Sbjct: 247 VQETGLQLKQINNWFINQRKRNWHSS 272


>gi|350535567|ref|NP_001233945.1| homeobox protein knotted-1-like LET12 [Solanum lycopersicum]
 gi|6016226|sp|O22300.1|LET12_SOLLC RecName: Full=Homeobox protein knotted-1-like LET12
 gi|2529703|gb|AAC49918.1| class II knotted-like homeodomain protein [Solanum lycopersicum]
          Length = 426

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 314 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSK 373

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 374 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 408


>gi|163838594|dbj|BAF95776.1| class 2 knotted1-like protein [Nicotiana tabacum]
          Length = 391

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 281 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSK 340

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE DK +L + TGL  KQINNWFINQRKR+W
Sbjct: 341 WPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 375


>gi|224163293|ref|XP_002338542.1| predicted protein [Populus trichocarpa]
 gi|222872740|gb|EEF09871.1| predicted protein [Populus trichocarpa]
          Length = 156

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 15/139 (10%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEEYSGAE--------------TEAQDAEARDEDRHLK 65
           ++P EG TG   S+ +D  A SD  ++                 TE + +      + LK
Sbjct: 4   VSPGEG-TGATMSDDEDDQAESDTNFNDGNLDGLDTMGFGPLVPTETERSLMERVRQELK 62

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +  + +   I  ++ E  +K++ GKLP ++   L  WW  H KWPYP+E DK +L + T
Sbjct: 63  HEFKQDYKEKIVDIREEILRKRRAGKLPGDTTSHLKAWWQTHSKWPYPSEEDKARLVQET 122

Query: 126 GLDQKQINNWFINQRKRHW 144
           GL  KQINNWFINQRKR+W
Sbjct: 123 GLQLKQINNWFINQRKRNW 141


>gi|167178668|gb|ABZ10965.1| class 1 knox protein [Kalanchoe x houghtonii]
          Length = 409

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 56/83 (67%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           + LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L
Sbjct: 299 QELKHELKQGYKDKIVDIREEILRKRRAGKLPGDTTSHLKAWWRSHSKWPYPTEEDKARL 358

Query: 122 AESTGLDQKQINNWFINQRKRHW 144
            + TGL  KQINNWFINQRKR+W
Sbjct: 359 VQETGLQLKQINNWFINQRKRNW 381


>gi|168199344|gb|ABZ10962.1| class 1 knox protein [Kalanchoe x houghtonii]
          Length = 412

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 55/81 (67%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L +
Sbjct: 303 LKHELKQGYKDKIVDIREEILRKRRAGKLPGDTTSHLKAWWRSHSKWPYPTEEDKARLVQ 362

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 363 ETGLQLKQINNWFINQRKRNW 383


>gi|388500714|gb|AFK38423.1| unknown [Medicago truncatula]
          Length = 342

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 55/81 (67%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L +
Sbjct: 235 LKHELKQGYKEKIVDVREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKTRLVQ 294

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 295 ETGLQLKQINNWFINQRKRNW 315


>gi|4336768|gb|AAD17941.1| knotted 1 homolog [Santalum album]
          Length = 58

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 39/55 (70%), Positives = 49/55 (89%)

Query: 87  KKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           KKKGKLP+ ++ TLLDWW+ HY+WPYPTE +K++L+E TGLD +QINNWFINQRK
Sbjct: 1   KKKGKLPENAKTTLLDWWSTHYRWPYPTEEEKMKLSEITGLDPRQINNWFINQRK 55


>gi|2306989|gb|AAB65797.1| homeobox protein [Cenchrus americanus]
 gi|3341721|gb|AAC27486.1| homeobox protein [Secale cereale]
          Length = 57

 Score = 92.0 bits (227), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 40/58 (68%), Positives = 48/58 (82%), Gaps = 1/58 (1%)

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           KGKLPK++R +L++WWN HY WPYPTE DK +     GLDQ+QINNWF+NQRKRHWKP
Sbjct: 1   KGKLPKDARLSLMNWWNTHYSWPYPTEEDK-RRGRHDGLDQRQINNWFVNQRKRHWKP 57


>gi|357478479|ref|XP_003609525.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
 gi|355510580|gb|AES91722.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
          Length = 332

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 55/81 (67%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L +
Sbjct: 235 LKHELKQGYKEKIVDVREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQ 294

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 295 ETGLQLKQINNWFINQRKRNW 315


>gi|210160856|gb|ACJ09316.1| KNAT3-like transcription factor [Juglans nigra]
          Length = 482

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 54/81 (66%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L   +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L +
Sbjct: 375 LKHELKLGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQ 434

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 435 ETGLQLKQINNWFINQRKRNW 455


>gi|132424655|gb|ABO33480.1| class II KNOX homeobox transcription factor [Medicago truncatula]
          Length = 439

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 75/140 (53%), Gaps = 16/140 (11%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEEY------SGAE---------TEAQDAEARDEDRHL 64
           ++P EG TG   S+ +D    SD          GA+         TE + +      + L
Sbjct: 282 VSPGEG-TGATMSDDEDEQVDSDANLFDGSFDGGADNMGFGPLIPTENERSLMERVRQEL 340

Query: 65  KDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAES 124
           K +L   +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE +K ++ + 
Sbjct: 341 KHELKHGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEENKARVVQE 400

Query: 125 TGLDQKQINNWFINQRKRHW 144
           TGL  KQINNWFINQRKR+W
Sbjct: 401 TGLQLKQINNWFINQRKRNW 420


>gi|254749398|dbj|BAH86595.1| class2 knotted-like homeobox [Selaginella uncinata]
          Length = 111

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 1/84 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK +L + + + I  ++ E  +K++ GKLP ++   L  WW+AH KWPYP+E DK +
Sbjct: 12  RHELKIELKQGYKAKINDVREEILRKRRAGKLPGDTTSVLKSWWHAHSKWPYPSEDDKAR 71

Query: 121 LAESTGLDQKQINNWFINQRKRHW 144
           L + TGL+ KQINNWFINQRKR+W
Sbjct: 72  LVQETGLELKQINNWFINQRKRNW 95


>gi|336112105|gb|AEI17371.1| Knox-like protein 3 [Capsella rubella]
          Length = 391

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 13/136 (9%)

Query: 20  INPSEGCTGLKFSNTKDGAASSDEE-YSGA----------ETEAQDAEARDEDRHLKDKL 68
           ++P EG TG   S  +D    SD   + G+           TE++ +      + LK +L
Sbjct: 231 VSPGEG-TGATMSEDEDEQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHEL 289

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
            + +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L + TGL 
Sbjct: 290 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTE-DKARLVQETGLQ 348

Query: 129 QKQINNWFINQRKRHW 144
            KQINNWFINQRKR+W
Sbjct: 349 LKQINNWFINQRKRNW 364


>gi|66865821|gb|AAY57559.1| knotted 1 [Zea mays]
          Length = 211

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/92 (58%), Positives = 68/92 (73%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           G++  D+E SG ETE  + +A   D+ LK  LL+K+  ++ SLK E SKKKKKGKLPKE+
Sbjct: 119 GSSEEDQEGSGGETELPEVDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEA 178

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
           RQ LL WW+ HYKWPYP+E  K+ LAESTGLD
Sbjct: 179 RQQLLSWWDQHYKWPYPSETQKVALAESTGLD 210


>gi|1045046|emb|CAA63132.1| KNAT5 homeobox protein [Arabidopsis thaliana]
          Length = 104

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 56/83 (67%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           + LK +L + F   I  ++ E  +K++ GKLP ++   L +WW  H KWPYPTE DK +L
Sbjct: 1   KELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKL 60

Query: 122 AESTGLDQKQINNWFINQRKRHW 144
            + TGL  KQINNWFINQRKR+W
Sbjct: 61  VQETGLQLKQINNWFINQRKRNW 83


>gi|374255987|gb|AEZ00855.1| putative knotted-like homeodomain protein, partial [Elaeis
           guineensis]
          Length = 109

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 56/81 (69%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + +   I  ++ E  +K++ GKLP ++  TL  WW +H KWPYPTE DK +L +
Sbjct: 2   LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSTLKAWWQSHSKWPYPTEDDKARLVQ 61

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 62  ETGLQLKQINNWFINQRKRNW 82


>gi|168199347|gb|ABZ10964.1| class 1 knox protein [Kalanchoe x houghtonii]
          Length = 384

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 54/81 (66%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L   +   I  ++ E  +K++ GKLP ++   L  WW +H KWPYPTE DK +L +
Sbjct: 281 LKHELKNGYKDKIVDIREEILRKRRAGKLPGDTTSHLKAWWKSHSKWPYPTEEDKARLVQ 340

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 341 ETGLQLKQINNWFINQRKRNW 361


>gi|6016214|sp|P56659.1|KNOX1_MAIZE RecName: Full=Homeobox protein knotted-1-like 1
          Length = 88

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 55/81 (67%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + F S I  ++ E  +K++ GKLP ++   L  WW  H KWPYPTE DK +L E
Sbjct: 5   LKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKAKLVE 64

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 65  ETGLQLKQINNWFINQRKRNW 85


>gi|294461542|gb|ADE76332.1| unknown [Picea sitchensis]
          Length = 354

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 61/95 (64%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           TE++ +      + LK  L + + + I  ++ E  +K++ GKLP ++   L  WW +H K
Sbjct: 244 TESERSLMERVRQELKVDLKQGYRAKIADVREEILRKRRAGKLPGDTTSRLKAWWQSHSK 303

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           WPYPTE +K +L + TGL  KQINNWFINQRKR+W
Sbjct: 304 WPYPTEDEKARLVQETGLQLKQINNWFINQRKRNW 338


>gi|168040482|ref|XP_001772723.1| KNOX class 2 protein MKN1-3 [Physcomitrella patens subsp. patens]
 gi|162675948|gb|EDQ62437.1| KNOX class 2 protein MKN1-3 [Physcomitrella patens subsp. patens]
          Length = 533

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 57/81 (70%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + + + I  ++ E  +K++ GKLP+ +   L  WW AH KWPYPTE +K +L +
Sbjct: 436 LKYELKQGYRARIVDVREEILRKRRAGKLPEGTTTVLKAWWQAHSKWPYPTEDEKERLIQ 495

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL+ KQ+NNWFINQRKR+W
Sbjct: 496 ETGLELKQVNNWFINQRKRNW 516


>gi|6016216|sp|P56660.1|KNOX2_MAIZE RecName: Full=Homeobox protein knotted-1-like 2
          Length = 88

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 56/81 (69%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + +   +  ++ E  +K++ GKLP ++  TL  WW AH KWPYPTE DK +L +
Sbjct: 5   LKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQ 64

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 65  ETGLQLKQINNWFINQRKRNW 85


>gi|6016222|sp|P56664.1|KNOX6_MAIZE RecName: Full=Homeobox protein knotted-1-like 6
 gi|6016223|sp|P56665.1|KNOX7_MAIZE RecName: Full=Homeobox protein knotted-1-like 7
 gi|913144|gb|AAB33490.1| KNOX6=class 2 knotted1-like homeobox gene knox6 product
           {homeodomain} [maize, Peptide Partial, 85 aa]
 gi|913145|gb|AAB33491.1| KNOX7=class 1 knotted1-like homeobox gene knox7 product
           {homeodomain} [maize, Peptide Partial, 85 aa]
          Length = 85

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 56/81 (69%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK++L + +   +  ++ E  +K++ GKLP ++   L  WW AH KWPYPTE DK +L +
Sbjct: 2   LKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLVQ 61

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL  KQINNWFINQRKR+W
Sbjct: 62  ETGLQLKQINNWFINQRKRNW 82


>gi|115605781|gb|ABJ15867.1| gamete-specific protein minus 1 [Chlamydomonas reinhardtii]
 gi|154243353|gb|ABS71849.1| gamete-specific minus 1 [Chlamydomonas reinhardtii]
          Length = 934

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/73 (49%), Positives = 49/73 (67%)

Query: 72  FGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQ 131
           +GS +  +    +++ K GKLP  + Q L  WW+ ++ WPYP+E DK QL E+  L+  Q
Sbjct: 836 YGSQLVQVAASLAQRPKVGKLPPAATQLLKGWWDDNFVWPYPSEEDKKQLGEAAALNNTQ 895

Query: 132 INNWFINQRKRHW 144
           INNWFINQRKRHW
Sbjct: 896 INNWFINQRKRHW 908


>gi|14348597|gb|AAK61309.1|AF285148_1 class 2 KNOTTED1-like protein MKN1-3 [Physcomitrella patens]
          Length = 533

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 56/81 (69%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + + + I  ++ E  +K++ GKLP+ +   L  WW AH KWPYPTE +K +  +
Sbjct: 436 LKYELKQGYRARIVDVREEILRKRRAGKLPEGTTTVLKAWWQAHSKWPYPTEDEKERRIQ 495

Query: 124 STGLDQKQINNWFINQRKRHW 144
            TGL+ KQ+NNWFINQRKR+W
Sbjct: 496 ETGLELKQVNNWFINQRKRNW 516


>gi|373938269|dbj|BAL46506.1| Knotted1-like homeobox protein [Diospyros kaki]
          Length = 438

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 36/60 (60%), Positives = 44/60 (73%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           +K++ GKLP ++   L  WW +H KWPYPTE DK  L + TGL  KQINNWFINQRKR+W
Sbjct: 363 RKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKAGLVQETGLQLKQINNWFINQRKRNW 422


>gi|66865829|gb|AAY57562.1| knotted 1-type homeobox protein 8 [Zea mays]
          Length = 194

 Score = 85.5 bits (210), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 83/131 (63%), Gaps = 13/131 (9%)

Query: 8   FAAWLSFFFEFIINPSEGCTGLKFSNTKD---GAASSDE--EYSGAETEAQDAEARDE-- 60
           +   L  F E +  P +  T  +F N+ +   G+  SD   E +G+  + QDA   +E  
Sbjct: 66  YCNMLVKFHEEMARPIQEAT--EFFNSMERQLGSTISDSNCEVAGSSEDEQDASCPEEID 123

Query: 61  ----DRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEA 116
               D+ LK +LLRK+G ++G L+ EFSK+KKKGKLPKE+RQ LL WW  HYKWPYP+E 
Sbjct: 124 PCAEDKELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSET 183

Query: 117 DKLQLAESTGL 127
           +K+ LAE+TGL
Sbjct: 184 EKMALAETTGL 194


>gi|371767716|gb|AEX56213.1| knotted-like 3 protein, partial [Dactylorhiza fuchsii]
          Length = 287

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/99 (56%), Positives = 74/99 (74%), Gaps = 2/99 (2%)

Query: 36  DGAASS--DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLP 93
           +G  SS  D++  GAE E  + + R ED+ LK  LL+K+  ++ SL+ E SKKKKKGKLP
Sbjct: 189 EGVVSSEEDQDAGGAEAEVAELDPRAEDKELKLHLLKKYSGYLSSLRQELSKKKKKGKLP 248

Query: 94  KESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           K++RQ LL+WW  HYKWPYP+E +K+ L+ESTGLDQKQI
Sbjct: 249 KDARQKLLNWWELHYKWPYPSETEKVALSESTGLDQKQI 287


>gi|218187298|gb|EEC69725.1| hypothetical protein OsI_39226 [Oryza sativa Indica Group]
          Length = 90

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/88 (54%), Positives = 64/88 (72%)

Query: 47  GAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNA 106
            AE +    + R +D+ LK  LL+K+  ++GSL+ E SKK+KKGKL KE+RQ LL WW  
Sbjct: 3   AAEGKDLGIDPRSDDKALKRHLLKKYSGYLGSLRKELSKKRKKGKLLKEARQKLLTWWEL 62

Query: 107 HYKWPYPTEADKLQLAESTGLDQKQINN 134
           HY+WPYP+E +K+ LAES GL+ KQINN
Sbjct: 63  HYRWPYPSEMEKIALAESMGLEPKQINN 90


>gi|371767746|gb|AEX56228.1| knotted-like 1 protein [Orchis anthropophora]
          Length = 150

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 73/98 (74%), Gaps = 2/98 (2%)

Query: 36  DGAASS--DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLP 93
           +G  SS  D++  GAE E  + + R ED+ LK  LL+K+  ++ SL+ E SKKKKKGKLP
Sbjct: 53  EGVVSSEEDQDAGGAEAEVAELDPRAEDKELKLHLLKKYSGYLSSLRQELSKKKKKGKLP 112

Query: 94  KESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQ 131
           K++RQ LL+WW  HYKWPYP+E +K+ L+ESTGLDQKQ
Sbjct: 113 KDARQKLLNWWELHYKWPYPSETEKVALSESTGLDQKQ 150


>gi|356499245|ref|XP_003518452.1| PREDICTED: homeobox protein SHOOT MERISTEMLESS-like [Glycine max]
          Length = 261

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 35/43 (81%), Positives = 38/43 (88%)

Query: 114 TEADKLQLAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMD 156
           +E+ K  LAESTGLD KQINNWFINQRKRHWKPSE+M FAVMD
Sbjct: 196 SESQKQALAESTGLDMKQINNWFINQRKRHWKPSEDMQFAVMD 238


>gi|168058967|ref|XP_001781477.1| KNOX class 1 protein, MKN4 [Physcomitrella patens subsp. patens]
 gi|162667114|gb|EDQ53752.1| KNOX class 1 protein, MKN4 [Physcomitrella patens subsp. patens]
          Length = 614

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 41/57 (71%)

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           K GKLP  +RQ L DW++ H  WPYP+E +K  L    GL+ KQINNWFIN+RKRHW
Sbjct: 526 KYGKLPTNARQILKDWFSRHSYWPYPSEMEKAYLQRLCGLNLKQINNWFINERKRHW 582


>gi|380746845|gb|AFE48353.1| KNOTTED-like 1-3c homeodomain protein, partial [Cuscuta pentagona]
          Length = 63

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 35/38 (92%)

Query: 121 LAESTGLDQKQINNWFINQRKRHWKPSENMHFAVMDNL 158
           LAESTGLDQKQINNWFINQRKRHWKPSE+M F VMD L
Sbjct: 2   LAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL 39


>gi|290996216|ref|XP_002680678.1| homeobox protein PKNOX1-like protein [Naegleria gruberi]
 gi|284094300|gb|EFC47934.1| homeobox protein PKNOX1-like protein [Naegleria gruberi]
          Length = 739

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 3/83 (3%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LKDK L K    + + +    + K++G LP+ +   L  W  +H+  PYPTE++K  L  
Sbjct: 563 LKDKYLTKI---LSTQENTLMRSKRRGNLPRHATNVLKSWLYSHFLHPYPTESEKKDLCM 619

Query: 124 STGLDQKQINNWFINQRKRHWKP 146
            TGL   Q+NNWFINQR R W+P
Sbjct: 620 ETGLTLTQVNNWFINQRVRTWRP 642


>gi|371767748|gb|AEX56229.1| knotted-like 1 protein [Orchis italica]
          Length = 134

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 61/103 (59%), Gaps = 15/103 (14%)

Query: 19  IINPSEGCTGLKFSNTKD----GAASSDEEY-------SGAETEAQDAEARDEDRHLKDK 67
           I+     C+   FS+T D    GAA SD +        S  ET  +D +   EDR LK++
Sbjct: 36  IVGGRSICS---FSSTADDEKCGAAYSDSQEGLLLDPNSAGETVMED-KIWAEDRELKNQ 91

Query: 68  LLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKW 110
           LLRK+  +IG+L+ E SKK+K GKLPKE+RQ LL WW  H KW
Sbjct: 92  LLRKYNGYIGTLRRELSKKRKMGKLPKEARQKLLGWWEFHNKW 134


>gi|384493517|gb|EIE84008.1| hypothetical protein RO3G_08713 [Rhizopus delemar RA 99-880]
          Length = 225

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 74  SHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQIN 133
           S +    LE SK++++G LPKE  + L  W   H K PYP E +K+ LA+ TGL   QI+
Sbjct: 121 SGVCPTPLEKSKRRRRGNLPKEVTEFLRTWLIQHKKHPYPAEKEKIDLAQQTGLTVNQIS 180

Query: 134 NWFINQRKRHWKP---SENMHFAVM 155
           NWFIN R+R  +P   SEN+   +M
Sbjct: 181 NWFINARRRILQPMLESENLCAQMM 205


>gi|11181643|gb|AAG32675.1| homeobox protein [Physcomitrella patens]
          Length = 57

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 39/55 (70%)

Query: 87  KKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           KKKGKLP  +R  L DW+N H  WPYP+E +K  L    GL+ KQINNWFINQRK
Sbjct: 1   KKKGKLPTSARTILKDWFNRHSHWPYPSEMEKQYLQRICGLNLKQINNWFINQRK 55


>gi|371767744|gb|AEX56227.1| knotted-like 1 protein [Gymnadenia rhellicani]
          Length = 151

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 73/99 (73%), Gaps = 2/99 (2%)

Query: 36  DGAASSDEEYSGA--ETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLP 93
           +G  SS+E+      E EA + + R ED+ LK  LL+K+  ++ SL+ E SKKKKKGKLP
Sbjct: 53  EGVVSSEEDQDAGVAEAEAAELDPRAEDKELKLHLLKKYSGYLSSLRQELSKKKKKGKLP 112

Query: 94  KESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           K++RQ LL+WW  HYKWPYP+E +K+ L+ESTGLDQKQI
Sbjct: 113 KDARQKLLNWWELHYKWPYPSETEKVALSESTGLDQKQI 151


>gi|371767728|gb|AEX56219.1| knotted-like 2 protein [Gymnadenia conopsea]
          Length = 151

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/99 (57%), Positives = 76/99 (76%), Gaps = 2/99 (2%)

Query: 36  DGAASS--DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLP 93
           +G  SS  D++  GAE EA + + R ED+ LK  LL+K+  ++ SL+ E SKKKKKGKLP
Sbjct: 53  EGVVSSEEDQDAGGAEAEAAELDPRAEDKELKLHLLKKYSGYLSSLRQELSKKKKKGKLP 112

Query: 94  KESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           K++RQ LL+WW  HYKWPYP+E++K+ L+ESTGLDQKQI
Sbjct: 113 KDARQKLLNWWELHYKWPYPSESEKVALSESTGLDQKQI 151


>gi|371767722|gb|AEX56216.1| knotted-like 3 protein [Gymnadenia odoratissima]
          Length = 151

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/99 (57%), Positives = 75/99 (75%), Gaps = 2/99 (2%)

Query: 36  DGAASS--DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLP 93
           +G  SS  D++  GAE EA + + R ED+ LK  LL+K+  ++ SL+ E SKKKKKGKLP
Sbjct: 53  EGVVSSEEDQDAGGAEAEAAELDPRAEDKELKLHLLKKYSGYLSSLRQELSKKKKKGKLP 112

Query: 94  KESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           K++RQ LL+WW  HYKWPYP+E +K+ L+ESTGLDQKQI
Sbjct: 113 KDARQKLLNWWELHYKWPYPSETEKVALSESTGLDQKQI 151


>gi|413950087|gb|AFW82736.1| liguleless4 [Zea mays]
          Length = 277

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 66/117 (56%), Gaps = 6/117 (5%)

Query: 4   LYLPFAAWLSFFFEFIINPSEGC-TGLKFSNTKDGAASSDEEYSGAETEA-----QDAEA 57
           L  PF    SF        S  C      S+   G++  DE  SG +TEA     Q+  +
Sbjct: 127 LSRPFDEAASFLSSVRTQLSSLCGAAASLSDEMVGSSEEDEACSGGDTEATEPGQQEHSS 186

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPT 114
           R  DR LK+ LL+K+   +  L+ EF KK+KKGKLPK++R  L+DWWN HY+WPYPT
Sbjct: 187 RLADRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 243


>gi|290998453|ref|XP_002681795.1| homeodomain-containing protein [Naegleria gruberi]
 gi|284095420|gb|EFC49051.1| homeodomain-containing protein [Naegleria gruberi]
          Length = 246

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 42/61 (68%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K+ +G LPKE+ + L +W   H++ PYP+E +K  LAE T L   Q+NNWFIN R+R WK
Sbjct: 3   KQSRGTLPKEAVEHLKNWLFLHFQHPYPSEEEKAVLAEETSLTLVQVNNWFINARRRLWK 62

Query: 146 P 146
           P
Sbjct: 63  P 63


>gi|371767718|gb|AEX56214.1| knotted-like 3 protein [Dactylorhiza incarnata]
          Length = 154

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/93 (53%), Positives = 68/93 (73%), Gaps = 2/93 (2%)

Query: 36  DGAASS--DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLP 93
           +G  SS  D++  GAE E  + + R ED+ LK  LL+K+  ++ SL+ E SKKKKKGKLP
Sbjct: 56  EGVVSSEEDQDAGGAEAEVAELDPRAEDKELKLHLLKKYSGYLSSLRQELSKKKKKGKLP 115

Query: 94  KESRQTLLDWWNAHYKWPYPTEADKLQLAESTG 126
           K++RQ LL+WW  HYKWPYP+E +K+ L+ESTG
Sbjct: 116 KDARQKLLNWWELHYKWPYPSETEKVALSESTG 148


>gi|149234824|ref|XP_001523291.1| hypothetical protein LELG_05517 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146453080|gb|EDK47336.1| hypothetical protein LELG_05517 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 358

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 3/76 (3%)

Query: 73  GSHIGSLKL---EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQ 129
           GS    L L   ++SK+K +  LPKE    LL W N H   PYP   +K QL  +TGL+Q
Sbjct: 272 GSQTPQLGLSPQQYSKRKTRNNLPKEITYVLLRWLNDHLNHPYPNSFEKNQLMLTTGLNQ 331

Query: 130 KQINNWFINQRKRHWK 145
           +Q++NWFIN R+R  K
Sbjct: 332 QQLSNWFINARRRKIK 347


>gi|397639151|gb|EJK73411.1| hypothetical protein THAOC_04964 [Thalassiosira oceanica]
          Length = 419

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 2/70 (2%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNA--HYKWPYPTEADKLQLAESTGLDQKQINNWF 136
           +K   + +KK   LP E+ + L +W  +  H   PYPTEA+K Q+ E TG++ KQ+ NWF
Sbjct: 1   MKSSSAGRKKSTSLPLETVEYLKEWMMSPEHIAHPYPTEAEKAQIMEETGIELKQLTNWF 60

Query: 137 INQRKRHWKP 146
           +N RKR+WKP
Sbjct: 61  VNNRKRYWKP 70


>gi|358379381|gb|EHK17061.1| hypothetical protein TRIVIDRAFT_66021 [Trichoderma virens Gv29-8]
          Length = 363

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 44/67 (65%)

Query: 76  IGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNW 135
           +G++  E  ++K++G LPKE+   L  W+  H + PYPTE +K +L   TGL   QI+NW
Sbjct: 235 LGAMAGESKQRKRRGNLPKETTDKLRTWFVQHLQHPYPTEDEKQELVRQTGLQMNQISNW 294

Query: 136 FINQRKR 142
           FIN R+R
Sbjct: 295 FINARRR 301


>gi|11181647|gb|AAG32677.1| homeobox protein [Physcomitrella patens]
          Length = 58

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 40/55 (72%)

Query: 87  KKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           ++KGKLP  +RQ L DW++ H  WPYP+E +K  L    GL+ KQINNWFINQRK
Sbjct: 2   QEKGKLPTNARQILKDWFSRHSYWPYPSEMEKAYLQRLCGLNLKQINNWFINQRK 56


>gi|448101598|ref|XP_004199600.1| Piso0_002138 [Millerozyma farinosa CBS 7064]
 gi|359381022|emb|CCE81481.1| Piso0_002138 [Millerozyma farinosa CBS 7064]
          Length = 356

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 41/62 (66%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           SK+K +  LPKE+   L+ W N H   PYP   +K QL  STGL+Q+Q++NWFIN R+R 
Sbjct: 225 SKRKTRNNLPKETTYILIKWLNEHISHPYPNSFEKNQLMMSTGLNQQQLSNWFINARRRK 284

Query: 144 WK 145
            K
Sbjct: 285 IK 286


>gi|302903104|ref|XP_003048785.1| hypothetical protein NECHADRAFT_47076 [Nectria haematococca mpVI
           77-13-4]
 gi|256729719|gb|EEU43072.1| hypothetical protein NECHADRAFT_47076 [Nectria haematococca mpVI
           77-13-4]
          Length = 412

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 49/83 (59%)

Query: 78  SLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFI 137
           SL  +  ++K++G LPKE+   L  W+ AH + PYPTE +K +L   TGL   QI+NWFI
Sbjct: 272 SLNGDNKQRKRRGNLPKETTDKLRAWFVAHLQHPYPTEDEKQELMRQTGLQMNQISNWFI 331

Query: 138 NQRKRHWKPSENMHFAVMDNLSG 160
           N R+R      N   A  D ++G
Sbjct: 332 NARRRQLPTMINNARAESDAMTG 354


>gi|295828780|gb|ADG38059.1| AT1G70510-like protein [Neslia paniculata]
          Length = 53

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/53 (75%), Positives = 46/53 (86%)

Query: 52  AQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWW 104
           A +++ R  DR LKD+LLRKFGSHI SLKLEFSKKKKKGKLP+E+RQ LLDWW
Sbjct: 1   AHESQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWW 53


>gi|342879086|gb|EGU80360.1| hypothetical protein FOXB_09108 [Fusarium oxysporum Fo5176]
          Length = 412

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 48/84 (57%)

Query: 77  GSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWF 136
            SL  +  ++K++G LPKE+   L  W+ AH + PYPTE +K  L   TGL   QI+NWF
Sbjct: 273 ASLSGDNKQRKRRGNLPKETTDKLRAWFVAHLQHPYPTEDEKQDLMRQTGLQMNQISNWF 332

Query: 137 INQRKRHWKPSENMHFAVMDNLSG 160
           IN R+R      N   A  D ++G
Sbjct: 333 INARRRQLPAMINNARAETDAMTG 356


>gi|410930828|ref|XP_003978800.1| PREDICTED: homeobox protein meis3-like [Takifugu rubripes]
          Length = 418

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 59/140 (42%), Gaps = 21/140 (15%)

Query: 9   AAWLSFFFEFIINP--SEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKD 66
           A+WL    E    P  + G  GL    T D  + + +   GA T     E  + DR    
Sbjct: 195 ASWLREPDECATTPLGTPGTCGLPSLGTADNCSDTGDGLDGAMTSPSTGEEDESDR---- 250

Query: 67  KLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTG 126
                          E    KK+G  PK +   L  W   H   PYP+E  K QL++ TG
Sbjct: 251 ---------------ERRNNKKRGIFPKVATNILRAWLFQHLSHPYPSEEQKKQLSQDTG 295

Query: 127 LDQKQINNWFINQRKRHWKP 146
           L   Q+NNWFIN R+R  +P
Sbjct: 296 LTILQVNNWFINARRRIVQP 315


>gi|345569021|gb|EGX51890.1| hypothetical protein AOL_s00043g624 [Arthrobotrys oligospora ATCC
           24927]
          Length = 388

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH-- 143
           K+++G LPK+    L +W +AH   PYPTE  KL+L   TGL   QI+NWFIN R+R   
Sbjct: 294 KRRRGNLPKQVTDLLRNWLHAHLHHPYPTEDQKLELVNQTGLTMNQISNWFINARRRRLP 353

Query: 144 -WKPSENMHFAVMD 156
            + P  N   + MD
Sbjct: 354 AYNPPNNSARSDMD 367


>gi|322709366|gb|EFZ00942.1| homeodomain-containing protein [Metarhizium anisopliae ARSEF 23]
          Length = 406

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 3/85 (3%)

Query: 76  IGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNW 135
           IGS   +  ++K++G LPKE+   L  W+ AH + PYPTE +K +L   TGL   QI+NW
Sbjct: 268 IGS---DAKQRKRRGNLPKETTDKLRSWFVAHLQHPYPTEDEKQELMRQTGLQMNQISNW 324

Query: 136 FINQRKRHWKPSENMHFAVMDNLSG 160
           FIN R+R      N   A  D ++G
Sbjct: 325 FINARRRQLPAMINNARAESDAMNG 349


>gi|322697161|gb|EFY88944.1| homeodomain-containing protein [Metarhizium acridum CQMa 102]
          Length = 409

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 3/85 (3%)

Query: 76  IGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNW 135
           IGS   +  ++K++G LPKE+   L  W+ AH + PYPTE +K +L   TGL   QI+NW
Sbjct: 271 IGS---DAKQRKRRGNLPKETTDKLRSWFVAHLQHPYPTEDEKQELMRQTGLQMNQISNW 327

Query: 136 FINQRKRHWKPSENMHFAVMDNLSG 160
           FIN R+R      N   A  D ++G
Sbjct: 328 FINARRRQLPAMINNARAESDAMNG 352


>gi|226498896|ref|NP_001148063.1| homeodomain protein JUBEL1 [Zea mays]
 gi|195615578|gb|ACG29619.1| homeodomain protein JUBEL1 [Zea mays]
          Length = 755

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D   S   T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L 
Sbjct: 507 DAGTSSGLTKGETPRLRAIDQSLRQQ--RAF-HHMGMMEQEAWRPQRG--LPERSVNILR 561

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 562 SWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 606


>gi|6746351|gb|AAF27529.1| knotted-1 homeobox protein [Aegilops longissima]
          Length = 41

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/58 (56%), Positives = 38/58 (65%), Gaps = 17/58 (29%)

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           KGKLPK++R  L+DWWN HY+WPYPT                 INNWF+NQRKRHWKP
Sbjct: 1   KGKLPKDARLALVDWWNTHYRWPYPT-----------------INNWFVNQRKRHWKP 41


>gi|414872621|tpg|DAA51178.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           [Zea mays]
          Length = 755

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D   S   T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L 
Sbjct: 507 DAGTSSGLTKGETPRLRAIDQSLRQQ--RAF-HHMGMMEQEAWRPQRG--LPERSVNILR 561

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 562 SWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 606


>gi|400601610|gb|EJP69253.1| homeobox domain-containing protein [Beauveria bassiana ARSEF 2860]
          Length = 372

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 40/58 (68%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           ++K++G LPKE+   L  W+ AH + PYPTE +K QL   TGL   QI+NWFIN R+R
Sbjct: 257 QRKRRGNLPKETTDKLRSWFIAHLQHPYPTEDEKQQLMHQTGLQMNQISNWFINARRR 314


>gi|148729575|gb|ABR09190.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729577|gb|ABR09191.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729579|gb|ABR09192.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729581|gb|ABR09193.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729583|gb|ABR09194.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729585|gb|ABR09195.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729587|gb|ABR09196.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729589|gb|ABR09197.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729591|gb|ABR09198.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729593|gb|ABR09199.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729595|gb|ABR09200.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729597|gb|ABR09201.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729599|gb|ABR09202.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729601|gb|ABR09203.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729603|gb|ABR09204.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729605|gb|ABR09205.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729607|gb|ABR09206.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729609|gb|ABR09207.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729611|gb|ABR09208.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729613|gb|ABR09209.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729615|gb|ABR09210.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729617|gb|ABR09211.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729619|gb|ABR09212.1| shoot meristemless [Arabidopsis thaliana]
 gi|148729621|gb|ABR09213.1| shoot meristemless [Arabidopsis thaliana]
          Length = 84

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 5/83 (6%)

Query: 37  GAASSDEEYSGAETEAQD-----AEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGK 91
           G  + D   +G+  E  D      + + EDR LK +LLRK+  ++GSLK EF KK+KKGK
Sbjct: 2   GETAIDRNNNGSSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGK 61

Query: 92  LPKESRQTLLDWWNAHYKWPYPT 114
           LPKE+RQ LLDWW+ HYKWPYP+
Sbjct: 62  LPKEARQQLLDWWSRHYKWPYPS 84


>gi|384496537|gb|EIE87028.1| hypothetical protein RO3G_11739 [Rhizopus delemar RA 99-880]
          Length = 245

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 3/74 (4%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           K++++G LPKE  + L  W   H K PYP E +K+ LA+ TGL   QI+NWFIN R+R  
Sbjct: 126 KRRRRGNLPKEVTEFLRTWLIQHKKHPYPAEKEKIDLAQQTGLTVNQISNWFINARRRIL 185

Query: 145 KP---SENMHFAVM 155
           +P   SEN+   +M
Sbjct: 186 QPMLESENLCAQMM 199


>gi|293330409|dbj|BAJ04685.1| BEL1-type homeodomain protein [Triticum aestivum]
          Length = 767

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D   S   T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L 
Sbjct: 503 DAGTSSGLTKGETPRLRAIDQSLRQQ--RAF-HHMGMMEQEAWRPQRG--LPERSVSILR 557

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 558 SWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 602


>gi|242038239|ref|XP_002466514.1| hypothetical protein SORBIDRAFT_01g009130 [Sorghum bicolor]
 gi|241920368|gb|EER93512.1| hypothetical protein SORBIDRAFT_01g009130 [Sorghum bicolor]
          Length = 770

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D   S   T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L 
Sbjct: 515 DAGTSSGLTKGETPRLRAIDQSLRQQ--RAF-HHMGMMEQEAWRPQRG--LPERSVNILR 569

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 570 SWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 614


>gi|293330411|dbj|BAJ04686.1| BEL1-type homeodomain protein [Triticum aestivum]
          Length = 771

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D   S   T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L 
Sbjct: 507 DAGTSSGLTKGETPRLRAIDQSLRQQ--RAF-HHMGMMEQEAWRPQRG--LPERSVSILR 561

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 562 SWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 606


>gi|293330407|dbj|BAJ04684.1| BEL1-type homeodomain protein [Triticum aestivum]
          Length = 765

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D   S   T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L 
Sbjct: 501 DAGTSSGLTKGETPRLRAIDQSLRQQ--RAF-HHMGMMEQEAWRPQRG--LPERSVSILR 555

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 556 SWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 600


>gi|408397126|gb|EKJ76276.1| PTH12 [Fusarium pseudograminearum CS3096]
          Length = 441

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 47/83 (56%)

Query: 77  GSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWF 136
            SL  +  ++K++G LPKE+   L  W+ AH + PYPTE +K  L   TGL   QI+NWF
Sbjct: 302 ASLSGDNKQRKRRGNLPKETTDKLRAWFVAHLQHPYPTEDEKQDLMRQTGLQMNQISNWF 361

Query: 137 INQRKRHWKPSENMHFAVMDNLS 159
           IN R+R      N   A  D +S
Sbjct: 362 INARRRQLPTMINNARAETDAMS 384


>gi|371767694|gb|AEX56203.1| class II KNOX protein [Linaria vulgaris]
          Length = 171

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 44/69 (63%)

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAE 123
           LK +L + F S I  ++ E  +K++ GKLP ++   L +WW  H KWPYPTE D+ +L E
Sbjct: 103 LKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWEQHSKWPYPTEDDRAKLVE 162

Query: 124 STGLDQKQI 132
            TGL  KQI
Sbjct: 163 QTGLQLKQI 171


>gi|357115365|ref|XP_003559459.1| PREDICTED: uncharacterized protein LOC100839252 [Brachypodium
           distachyon]
          Length = 846

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 6/120 (5%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D   S   T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L 
Sbjct: 568 DAGTSSGLTKGETPRLRAIDQSLRQQ--RAF-HHMGMMEQEAWRPQRG--LPERSVSILR 622

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENMHFAVMDNLSG 160
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP  E M+      L G
Sbjct: 623 SWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMIEEMYQQETKELEG 682


>gi|326516018|dbj|BAJ88032.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 757

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D   S   T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L 
Sbjct: 495 DAGTSSGLTKGETPRLRAIDQSLRQQ--RAF-HHMGMMEQEAWRPQRG--LPERSVSILR 549

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 550 SWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 594


>gi|325183087|emb|CCA17544.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 384

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 41/60 (68%)

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           K+ +L ++S + +  W+ AH   PYP  A++  +AE TGL ++Q+ NWF N RKRHWKPS
Sbjct: 305 KRPRLARQSNEFMRGWFLAHKANPYPNAAERASIAERTGLSEQQVRNWFANMRKRHWKPS 364


>gi|46122195|ref|XP_385651.1| hypothetical protein FG05475.1 [Gibberella zeae PH-1]
          Length = 443

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 47/83 (56%)

Query: 77  GSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWF 136
            SL  +  ++K++G LPKE+   L  W+ AH + PYPTE +K  L   TGL   QI+NWF
Sbjct: 304 ASLSGDNKQRKRRGNLPKETTDKLRAWFVAHLQHPYPTEDEKQDLMRQTGLQMNQISNWF 363

Query: 137 INQRKRHWKPSENMHFAVMDNLS 159
           IN R+R      N   A  D +S
Sbjct: 364 INARRRQLPTMINNARAETDAMS 386


>gi|448097753|ref|XP_004198750.1| Piso0_002138 [Millerozyma farinosa CBS 7064]
 gi|359380172|emb|CCE82413.1| Piso0_002138 [Millerozyma farinosa CBS 7064]
          Length = 353

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 45/73 (61%)

Query: 73  GSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           GS + +     +K+K +  LPKE+   L+ W N H   PYP   +K QL  STGL+Q+Q+
Sbjct: 212 GSAVNNGAHGSNKRKTRNNLPKETTYILIKWLNEHISHPYPNSFEKNQLMMSTGLNQQQL 271

Query: 133 NNWFINQRKRHWK 145
           +NWFIN R+R  K
Sbjct: 272 SNWFINARRRKIK 284


>gi|326527287|dbj|BAK04585.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 342

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 3/89 (3%)

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           R ED  +  +L+R+      +   E   K  +G LP+ES   L  W   H+  PYP++ +
Sbjct: 227 RQED--MVGRLVRRTKQAAAARAAEQVCKPMRG-LPEESVAVLRAWLFNHFLDPYPSDNE 283

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKP 146
           KL+LA STGL ++QI+NWFIN R R WKP
Sbjct: 284 KLRLAVSTGLSRRQISNWFINARVRLWKP 312


>gi|13752407|gb|AAK38645.1|AF334758_1 homeodomain protein JUBEL1 [Hordeum vulgare subsp. vulgare]
          Length = 759

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D   S   T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L 
Sbjct: 495 DAGTSSGLTKGETPRLRAIDQSLRQQ--RAF-HHMGMMEQEAWRPQRG--LPERSVSILR 549

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 550 SWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 594


>gi|222625738|gb|EEE59870.1| hypothetical protein OsJ_12461 [Oryza sativa Japonica Group]
          Length = 816

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 5/97 (5%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L  W   H+ 
Sbjct: 549 TKGETPRLRAIDQSLRQQ--RAF-HHMGIMEQEAWRPQRG--LPERSVNILRSWLFEHFL 603

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 604 HPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 640


>gi|361126502|gb|EHK98500.1| putative Homeobox protein TOS8 [Glarea lozoyensis 74030]
          Length = 287

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 43/61 (70%)

Query: 82  EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           E + ++++G LPKE  + L +W+++H   PYPTE +KL+L   TGL   Q++NW+IN R+
Sbjct: 175 ETAPRRRRGNLPKEVTEILREWFHSHLHRPYPTEEEKLELMARTGLQINQVSNWYINARR 234

Query: 142 R 142
           R
Sbjct: 235 R 235


>gi|346971244|gb|EGY14696.1| Pth12p [Verticillium dahliae VdLs.17]
          Length = 418

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 44/76 (57%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++K++G LPKE+   L  W+ AH + PYPTE +K  L   TGL   QI+NWFIN R+R  
Sbjct: 290 QRKRRGNLPKETTDKLRAWFVAHLQHPYPTEDEKQDLMRQTGLQMNQISNWFINARRRQL 349

Query: 145 KPSENMHFAVMDNLSG 160
               N   A  D  SG
Sbjct: 350 PAMINNARAESDATSG 365


>gi|402077264|gb|EJT72613.1| hypothetical protein GGTG_09473 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 494

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 2/71 (2%)

Query: 74  SHIGSLKL--EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQ 131
           S +G + L  +  ++K++G LPKE+   L  W+ AH + PYPTE +K +L   TGL   Q
Sbjct: 349 SELGGMGLNGDNKQRKRRGNLPKETTDKLRAWFLAHLQHPYPTEDEKQELMRQTGLQMNQ 408

Query: 132 INNWFINQRKR 142
           I+NWFIN R+R
Sbjct: 409 ISNWFINARRR 419


>gi|171686576|ref|XP_001908229.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943249|emb|CAP68902.1| unnamed protein product [Podospora anserina S mat+]
          Length = 373

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 40/61 (65%)

Query: 82  EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           E  ++K++G LPKE+   L  W+ AH   PYPTE +K +L   TGL   QI+NWFIN R+
Sbjct: 238 ENKQRKRRGNLPKETTDKLRAWFVAHLHHPYPTEDEKQELMRQTGLQMNQISNWFINARR 297

Query: 142 R 142
           R
Sbjct: 298 R 298


>gi|125545619|gb|EAY91758.1| hypothetical protein OsI_13400 [Oryza sativa Indica Group]
          Length = 803

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 5/97 (5%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L  W   H+ 
Sbjct: 559 TKGETPRLRAIDQSLRQQ--RAF-HHMGIMEQEAWRPQRG--LPERSVNILRSWLFEHFL 613

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 614 HPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 650


>gi|356496090|ref|XP_003516903.1| PREDICTED: BEL1-like homeodomain protein 9-like [Glycine max]
          Length = 609

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 2/95 (2%)

Query: 58  RDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEAD 117
           +DE     +     +G   G L+ +   + ++G LP+ +   L  W   H+  PYPT+ D
Sbjct: 362 KDESPRFGNSDRGPYGQRPGFLEHQPVWRPQRG-LPERAVTVLRAWLFEHFLHPYPTDTD 420

Query: 118 KLQLAESTGLDQKQINNWFINQRKRHWKPS-ENMH 151
           KL LA+ TGL + Q++NWFIN R R WKP  E +H
Sbjct: 421 KLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIH 455


>gi|294656360|ref|XP_002770255.1| DEHA2D03454p [Debaryomyces hansenii CBS767]
 gi|199431412|emb|CAR65613.1| DEHA2D03454p [Debaryomyces hansenii CBS767]
          Length = 247

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 8/125 (6%)

Query: 24  EGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKD---KLLRKFGSHIGSLK 80
           EG +   F  T    A + E +    +EA    A     H K    K   K  ++ G   
Sbjct: 118 EGMSRPSFDITPRYGAPTHERHRAVSSEASLPVAGVVPTHFKSDEPKYAVKTMTNAG--- 174

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
               K+K +  LPKE+   L++W N H   PYP   +K QL  +TGL+ +Q++NWFIN R
Sbjct: 175 --VCKRKTRNNLPKETTYILINWLNDHLNHPYPNSFEKNQLMIATGLNHQQLSNWFINAR 232

Query: 141 KRHWK 145
           +R  K
Sbjct: 233 RRKIK 237


>gi|384494376|gb|EIE84867.1| hypothetical protein RO3G_09577 [Rhizopus delemar RA 99-880]
          Length = 247

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 3/67 (4%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           +K++G LPKE  + L  W   H + PYPTE +K QLA+ TGL   QI+NWFIN R+R  +
Sbjct: 114 RKRRGNLPKEVTEFLKQWLLLHKRHPYPTEREKQQLADETGLMVSQISNWFINARRRILQ 173

Query: 146 P---SEN 149
           P   SEN
Sbjct: 174 PLLESEN 180


>gi|402223066|gb|EJU03131.1| hypothetical protein DACRYDRAFT_15039 [Dacryopinax sp. DJM-731 SS1]
          Length = 593

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/67 (41%), Positives = 45/67 (67%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           +K K++GKLP+E  + L +W   H + PYPTE +K ++  +TGL   Q++NWFIN R+R 
Sbjct: 341 AKAKRRGKLPREVTEYLKEWLMKHAEHPYPTEEEKKEMCRNTGLHMTQLSNWFINARRRI 400

Query: 144 WKPSENM 150
             P+ ++
Sbjct: 401 LAPNRSL 407


>gi|429860689|gb|ELA35415.1| homeodomain-containing protein [Colletotrichum gloeosporioides Nara
           gc5]
          Length = 410

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 39/58 (67%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           ++K++G LPKE+   L  W+ AH   PYPTE +K +L   TGL   QI+NWFIN R+R
Sbjct: 283 QRKRRGNLPKETTDKLRAWFVAHLHHPYPTEDEKQELMRQTGLQMNQISNWFINARRR 340


>gi|380490069|emb|CCF36273.1| homeobox domain-containing protein [Colletotrichum higginsianum]
          Length = 407

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 39/58 (67%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           ++K++G LPKE+   L  W+ AH   PYPTE +K +L   TGL   QI+NWFIN R+R
Sbjct: 280 QRKRRGNLPKETTDKLRAWFVAHLHHPYPTEDEKQELMRQTGLQMNQISNWFINARRR 337


>gi|47207850|emb|CAF87244.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 569

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/139 (31%), Positives = 58/139 (41%), Gaps = 21/139 (15%)

Query: 10  AWLSFFFEFIINP--SEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDK 67
           +WL    E    P  + G  GL    T D  + + +   GA T     E  + DR     
Sbjct: 345 SWLREPDECATTPLGTPGTCGLPSLGTADNCSDTGDGLDGAMTSPSTGEEDESDR----- 399

Query: 68  LLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGL 127
                         E    KK+G  PK +   L  W   H   PYP+E  K QL++ TGL
Sbjct: 400 --------------ERRNNKKRGIFPKVATNILRAWLFQHLTHPYPSEEQKKQLSQDTGL 445

Query: 128 DQKQINNWFINQRKRHWKP 146
              Q+NNWFIN R+R  +P
Sbjct: 446 TILQVNNWFINARRRIVQP 464


>gi|310789492|gb|EFQ25025.1| homeobox domain-containing protein [Glomerella graminicola M1.001]
          Length = 403

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 39/58 (67%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           ++K++G LPKE+   L  W+ AH   PYPTE +K +L   TGL   QI+NWFIN R+R
Sbjct: 276 QRKRRGNLPKETTDKLRAWFVAHLHHPYPTEDEKQELMRQTGLQMNQISNWFINARRR 333


>gi|238006170|gb|ACR34120.1| unknown [Zea mays]
          Length = 53

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/36 (77%), Positives = 33/36 (91%)

Query: 125 TGLDQKQINNWFINQRKRHWKPSENMHFAVMDNLSG 160
           TGLD KQINNWFINQRKRHWKPSE+M FA+M+ ++G
Sbjct: 2   TGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVAG 37


>gi|348687414|gb|EGZ27228.1| homebox and aldo/keto reductase domain-containing protein
           [Phytophthora sojae]
          Length = 303

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 42/62 (67%)

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           K+ ++ K S + L+ W+ AH   PYP+  ++ ++AE TGL ++Q+ NWF N RKRHWKP+
Sbjct: 224 KRSRITKRSNEFLVAWFLAHKDNPYPSSEERTEIAEKTGLAEQQVRNWFANMRKRHWKPN 283

Query: 148 EN 149
             
Sbjct: 284 RT 285


>gi|108710914|gb|ABF98709.1| homeodomain protein JUBEL1, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 790

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 5/97 (5%)

Query: 50  TEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYK 109
           T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L  W   H+ 
Sbjct: 531 TKGETPRLRAIDQSLRQQ--RAF-HHMGIMEQEAWRPQRG--LPERSVNILRSWLFEHFL 585

Query: 110 WPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 586 HPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 622


>gi|320590506|gb|EFX02949.1| homeobox transcription factor [Grosmannia clavigera kw1407]
          Length = 552

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/59 (47%), Positives = 39/59 (66%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           ++K++G LPKE+   L  W+ AH   PYP+E +K +L   TGL   QI+NWFIN R+R 
Sbjct: 385 QRKRRGNLPKETTDKLRAWFVAHLNHPYPSEDEKQELMRQTGLQMNQISNWFINARRRQ 443


>gi|223950259|gb|ACN29213.1| unknown [Zea mays]
 gi|414872620|tpg|DAA51177.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           [Zea mays]
          Length = 302

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D   S   T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L 
Sbjct: 54  DAGTSSGLTKGETPRLRAIDQSLRQQ--RAF-HHMGMMEQEAWRPQRG--LPERSVNILR 108

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 109 SWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 153


>gi|346319651|gb|EGX89252.1| homeobox transcription factor, putative [Cordyceps militaris CM01]
          Length = 371

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 39/58 (67%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           ++K++G LPKE+   L  W+ AH + PYPTE +K  L   TGL   QI+NWFIN R+R
Sbjct: 256 QRKRRGNLPKETTDKLRSWFVAHLQHPYPTEDEKQDLMRQTGLQMNQISNWFINARRR 313


>gi|371767704|gb|AEX56207.1| class II KNOX protein [Orchis anthropophora]
 gi|371767706|gb|AEX56208.1| class II KNOX protein [Orchis italica]
          Length = 166

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK +L + +   I  ++ E  +K++ GKLP ++  TL  WW +H KWPYPTE DK +
Sbjct: 95  RHELKHELKQDYKEKIVDIREEILRKRRAGKLPGDTTSTLKAWWQSHSKWPYPTEDDKAR 154

Query: 121 LAESTGLDQKQI 132
           L + TGL  KQI
Sbjct: 155 LVQETGLQLKQI 166


>gi|371767697|gb|AEX56204.1| class II KNOX protein, partial [Dactylorhiza viridis]
          Length = 166

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%)

Query: 62  RH-LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           RH LK +L + +   I  ++ E  +K++ GKLP ++  TL  WW +H KWPYPTE DK +
Sbjct: 95  RHELKHELKQDYKEKIVDIREEILRKRRAGKLPGDTTSTLKAWWQSHSKWPYPTEDDKAR 154

Query: 121 LAESTGLDQKQI 132
           L + TGL  KQI
Sbjct: 155 LVQETGLQLKQI 166


>gi|344299810|gb|EGW30163.1| hypothetical protein SPAPADRAFT_63770 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 266

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 42/69 (60%)

Query: 77  GSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWF 136
           GS+     K+K +  LPKE    LL W N H   PYP   +K QL  +TGL+Q+Q++NWF
Sbjct: 187 GSISPPPIKRKTRNNLPKEITFILLKWLNDHLNHPYPNSFEKNQLMMATGLNQQQLSNWF 246

Query: 137 INQRKRHWK 145
           IN R+R  K
Sbjct: 247 INARRRKIK 255


>gi|342298422|emb|CBY05401.1| REPLUMLESS-like protein [Lepidium appelianum]
          Length = 573

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 351 LPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKPMVEEI 410

Query: 151 H 151
           H
Sbjct: 411 H 411


>gi|147770644|emb|CAN73410.1| hypothetical protein VITISV_024375 [Vitis vinifera]
          Length = 642

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 426 LPERAVTVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEI 485

Query: 151 H 151
           H
Sbjct: 486 H 486


>gi|359481727|ref|XP_002272686.2| PREDICTED: uncharacterized protein LOC100266680 [Vitis vinifera]
          Length = 609

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 393 LPERAVTVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEI 452

Query: 151 H 151
           H
Sbjct: 453 H 453


>gi|295828770|gb|ADG38054.1| AT1G70510-like protein [Capsella grandiflora]
 gi|295828772|gb|ADG38055.1| AT1G70510-like protein [Capsella grandiflora]
 gi|295828774|gb|ADG38056.1| AT1G70510-like protein [Capsella grandiflora]
          Length = 53

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 45/53 (84%)

Query: 52  AQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWW 104
           A +++    DR LKD+LLRKFGSHI SLKLEFSKKKKKGKLP+E+RQ LLDWW
Sbjct: 1   AHESQQISNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWW 53


>gi|255577967|ref|XP_002529855.1| bel1 homeotic protein, putative [Ricinus communis]
 gi|223530631|gb|EEF32505.1| bel1 homeotic protein, putative [Ricinus communis]
          Length = 599

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 383 LPERAVTVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEI 442

Query: 151 H 151
           H
Sbjct: 443 H 443


>gi|356566587|ref|XP_003551512.1| PREDICTED: BEL1-like homeodomain protein 9-like [Glycine max]
          Length = 573

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 362 LPERAVSVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEI 421

Query: 151 H 151
           H
Sbjct: 422 H 422


>gi|297740294|emb|CBI30476.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 349 LPERAVTVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEI 408

Query: 151 H 151
           H
Sbjct: 409 H 409


>gi|125552568|gb|EAY98277.1| hypothetical protein OsI_20184 [Oryza sativa Indica Group]
          Length = 600

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT++DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 366 LPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 425

Query: 151 HFAVMDNLSGP 161
           H   M  L  P
Sbjct: 426 HNLEMRQLKNP 436


>gi|452823626|gb|EME30635.1| transcription factor [Galdieria sulphuraria]
          Length = 179

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%)

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           ++  L KE    L +W++ H + PYPTE++K QL + TG+  +QI NWFINQRKR W+ +
Sbjct: 106 RRENLSKEKVMRLKEWFDTHIQHPYPTESEKQQLCQETGMQMQQITNWFINQRKRGWRKT 165

Query: 148 E 148
           +
Sbjct: 166 D 166


>gi|396501252|ref|XP_003845939.1| hypothetical protein LEMA_P012470.1 [Leptosphaeria maculans JN3]
 gi|312222520|emb|CBY02460.1| hypothetical protein LEMA_P012470.1 [Leptosphaeria maculans JN3]
          Length = 458

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 71  KFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQK 130
           +F  H+G+    F++K++ G LPKE+   L +W+ A+   PYPTE  KL L   T L   
Sbjct: 372 RFQQHVGTDHNAFNRKRR-GNLPKEATNILKEWFAANRASPYPTEEQKLMLCNRTTLSIN 430

Query: 131 QINNWFINQRKR 142
           Q++NWFIN R+R
Sbjct: 431 QVSNWFINARRR 442


>gi|405959167|gb|EKC25229.1| Homeobox protein PKNOX2 [Crassostrea gigas]
          Length = 461

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 38/62 (61%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           KK K+G LPK + Q +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  
Sbjct: 272 KKSKRGVLPKHATQVMKSWLFQHIVHPYPTEDEKRQIANQTNLTLLQVNNWFINARRRIL 331

Query: 145 KP 146
           +P
Sbjct: 332 QP 333


>gi|384491315|gb|EIE82511.1| hypothetical protein RO3G_07216 [Rhizopus delemar RA 99-880]
          Length = 189

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 40/63 (63%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           + K+++G LPK     L DW   H K PYPTE +K QLA  T L+  QI+NWFIN R+R 
Sbjct: 85  NNKRRRGNLPKAVTAILRDWLCKHKKHPYPTEEEKAQLAAETNLNLNQISNWFINARRRI 144

Query: 144 WKP 146
            +P
Sbjct: 145 LQP 147


>gi|371767700|gb|AEX56205.1| class II KNOX protein [Gymnadenia odoratissima]
          Length = 168

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 15/127 (11%)

Query: 20  INPSEGCTGLKFSNTKDGAASS-----DEEYSGAE---------TEAQDAEARDEDRHLK 65
           I+P EG TG   S+  D  A       D  + G++         TE++ +      + LK
Sbjct: 43  ISPGEG-TGATMSDDDDDQADGETNFYDGSFDGSDSMGFGPLIPTESERSLMERVRQELK 101

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L   +   I  ++ E  +K++ GKLP ++  TL  WW +H KWPYPTE DK +L + T
Sbjct: 102 HELKNGYKEKIVDVREEILRKRRAGKLPVDTTSTLKAWWQSHAKWPYPTEDDKAKLVQET 161

Query: 126 GLDQKQI 132
           GL  KQI
Sbjct: 162 GLQLKQI 168


>gi|342298434|emb|CBY05407.1| REPLUMLESS-like protein [Lepidium campestre]
          Length = 566

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 350 LPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKPMVEEI 409

Query: 151 H 151
           H
Sbjct: 410 H 410


>gi|326487276|dbj|BAJ89622.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326492934|dbj|BAJ90323.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 10/124 (8%)

Query: 31  FSNTKDGAASSDEEYSGAETEAQDAEA------RDEDRHLK--DKLLRKFGSHIGSLKLE 82
           F + +DG A+      GA  E +DA A      + E   L+  D+ LR+  ++   + LE
Sbjct: 280 FRSVRDGVAAQVRAVRGALGE-KDAGAAVPGMTKGETPRLRALDQCLRQHKAYQSGM-LE 337

Query: 83  FSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
               + +  LP+ +   L  W   H+  PYP++ DK  LA  TGL + Q++NWFIN R R
Sbjct: 338 SHPWRPQRGLPERAVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 397

Query: 143 HWKP 146
            WKP
Sbjct: 398 LWKP 401


>gi|297806127|ref|XP_002870947.1| hypothetical protein ARALYDRAFT_486980 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316784|gb|EFH47206.1| hypothetical protein ARALYDRAFT_486980 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 575

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 354 LPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKPMVEEI 413

Query: 151 H 151
           H
Sbjct: 414 H 414


>gi|23397273|gb|AAN31918.1| putative homeodomain protein [Arabidopsis thaliana]
          Length = 575

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 355 LPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKPMVEEI 414

Query: 151 H 151
           H
Sbjct: 415 H 415


>gi|326500834|dbj|BAJ95083.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 807

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 5/105 (4%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D   S   T+ +    R  D+ L+ +  R F  H+G ++ E  + ++   LP+ S   L 
Sbjct: 545 DAGTSSGLTKGETPRLRAIDQSLRQQ--RAF-HHMGMMEQEAWRPQRG--LPERSVSILR 599

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NW IN R R WKP
Sbjct: 600 SWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWLINARVRLWKP 644


>gi|161612085|gb|AAI55782.1| Pknox1.1 protein [Danio rerio]
          Length = 433

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK++   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 265 SPKNKRGVLPKQATNVMRSWLFQHIAHPYPTEEEKKQIATQTNLTLLQVNNWFINARRRI 324

Query: 144 WKP 146
            +P
Sbjct: 325 LQP 327


>gi|326670595|ref|XP_003199243.1| PREDICTED: homeobox protein PKNOX1-like [Danio rerio]
 gi|14532260|gb|AAK66560.1|AF382393_1 pbx/knotted-1 homeobox Prep1.1 [Danio rerio]
 gi|16209577|gb|AAL14114.1| homeodomain transcription factor Prep1 [Danio rerio]
          Length = 433

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK++   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 265 SPKNKRGVLPKQATNVMRSWLFQHIAHPYPTEEEKKQIATQTNLTLLQVNNWFINARRRI 324

Query: 144 WKP 146
            +P
Sbjct: 325 LQP 327


>gi|226501620|ref|NP_001147936.1| bell-like homeodomain protein 3 [Zea mays]
 gi|195614696|gb|ACG29178.1| bell-like homeodomain protein 3 [Zea mays]
          Length = 621

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 4/97 (4%)

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
           D+ LR+  ++   + LE    + +  LP+ +   L  W   H+  PYP++ DK  LA  T
Sbjct: 326 DQCLRQHRAYQTGVVLESQPWRPQRGLPERAVSILRAWMFEHFLHPYPSDVDKHILARQT 385

Query: 126 GLDQKQINNWFINQRKRHWKPS-ENMHFAVMDNLSGP 161
           GL + Q++NWFIN R R WKP  E M+    + + GP
Sbjct: 386 GLSRSQVSNWFINARVRLWKPMVEEMY---SEEMKGP 419


>gi|21536507|gb|AAM60839.1| putative homeodomain protein [Arabidopsis thaliana]
 gi|33285288|emb|CAD58040.1| homeodomain protein vaamana [Arabidopsis thaliana]
          Length = 575

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 355 LPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKPMVEEI 414

Query: 151 H 151
           H
Sbjct: 415 H 415


>gi|15241667|ref|NP_195823.1| BEL1-like homeodomain protein 9 [Arabidopsis thaliana]
 gi|75264476|sp|Q9LZM8.1|BLH9_ARATH RecName: Full=BEL1-like homeodomain protein 9; Short=BEL1-like
           protein 9; AltName: Full=Protein BELLRINGER; AltName:
           Full=Protein LARSON; AltName: Full=Protein PENNYWISE;
           AltName: Full=Protein REPLUMLESS; AltName: Full=Protein
           VAAMANA
 gi|7340677|emb|CAB82976.1| putative homeodomain protein [Arabidopsis thaliana]
 gi|33089289|gb|AAP93641.1| bellringer homeodomain protein [Arabidopsis thaliana]
 gi|58331771|gb|AAW70383.1| At5g02030 [Arabidopsis thaliana]
 gi|332003040|gb|AED90423.1| BEL1-like homeodomain protein 9 [Arabidopsis thaliana]
          Length = 575

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 355 LPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKPMVEEI 414

Query: 151 H 151
           H
Sbjct: 415 H 415


>gi|371767702|gb|AEX56206.1| class II KNOX protein [Gymnadenia rhellicani]
          Length = 166

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 15/127 (11%)

Query: 20  INPSEGCTGLKFSNTKDGAASS-----DEEYSGAE---------TEAQDAEARDEDRHLK 65
           I+P EG TG   S+  D  A       D  + G++         TE++ +      + LK
Sbjct: 41  ISPGEG-TGATMSDDDDDQADGETNFYDGSFDGSDSMGFGPLIPTESERSLMERVRQELK 99

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
            +L   +   I  ++ E  +K++ GKLP ++  TL  WW +H KWPYPTE DK +L + T
Sbjct: 100 HELKNGYKEKIVDVREEILRKRRAGKLPVDTTSTLKAWWQSHAKWPYPTEDDKAKLVQET 159

Query: 126 GLDQKQI 132
           GL  KQI
Sbjct: 160 GLQLKQI 166


>gi|161353496|ref|NP_571966.2| pbx/knotted 1 homeobox 1.1 [Danio rerio]
          Length = 433

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK++   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 265 SPKNKRGVLPKQATNVMRSWLFQHIAHPYPTEEEKKQIATQTNLTLLQVNNWFINARRRI 324

Query: 144 WKP 146
            +P
Sbjct: 325 LQP 327


>gi|389639346|ref|XP_003717306.1| hypothetical protein MGG_12865 [Magnaporthe oryzae 70-15]
 gi|189086522|gb|ACD75718.1| Apf2p [Magnaporthe grisea]
 gi|351643125|gb|EHA50987.1| hypothetical protein MGG_12865 [Magnaporthe oryzae 70-15]
          Length = 470

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 39/58 (67%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           ++K++G LPKE+   L  W+ AH   PYPTE +K +L   TGL   QI+NWFIN R+R
Sbjct: 342 QRKRRGNLPKETTDKLRAWFLAHLSHPYPTEDEKQELMRQTGLQMNQISNWFINARRR 399


>gi|169642478|gb|AAI60854.1| Meis3 protein [Rattus norvegicus]
          Length = 429

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 40/68 (58%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L LE  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 310 LDLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 369

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 370 ARRRIVQP 377


>gi|67005921|gb|AAY62596.1| Pth12p [Magnaporthe grisea]
 gi|440472973|gb|ELQ41801.1| hypothetical protein OOU_Y34scaffold00253g2 [Magnaporthe oryzae
           Y34]
 gi|440484080|gb|ELQ64235.1| hypothetical protein OOW_P131scaffold00694g1 [Magnaporthe oryzae
           P131]
          Length = 447

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 39/58 (67%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           ++K++G LPKE+   L  W+ AH   PYPTE +K +L   TGL   QI+NWFIN R+R
Sbjct: 319 QRKRRGNLPKETTDKLRAWFLAHLSHPYPTEDEKQELMRQTGLQMNQISNWFINARRR 376


>gi|389744631|gb|EIM85813.1| hypothetical protein STEHIDRAFT_168887 [Stereum hirsutum FP-91666
           SS1]
          Length = 609

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 43/68 (63%)

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
           +E   +KK+GKLPK +   L DW + H   PYP+E +K QL  +TGL   Q++NW IN R
Sbjct: 338 VERPPQKKRGKLPKPTTDFLKDWLHRHSDHPYPSEEEKKQLCAATGLSMSQVSNWMINAR 397

Query: 141 KRHWKPSE 148
           +R   P++
Sbjct: 398 RRILAPAQ 405


>gi|1724056|gb|AAC52949.1| Meis3 [Mus musculus]
          Length = 378

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 40/68 (58%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L LE  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 259 LDLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 318

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 319 ARRRIVQP 326


>gi|116642900|ref|NP_032653.2| homeobox protein Meis3 [Mus musculus]
 gi|309265778|ref|XP_003086604.1| PREDICTED: homeobox protein Meis3-like [Mus musculus]
 gi|341940949|sp|P97368.2|MEIS3_MOUSE RecName: Full=Homeobox protein Meis3; AltName: Full=Meis1-related
           protein 2
 gi|109734346|gb|AAI17533.1| Meis homeobox 3 [Mus musculus]
 gi|148710161|gb|EDL42107.1| myeloid ecotropic viral integration site-related gene 2 [Mus
           musculus]
          Length = 378

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 40/68 (58%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L LE  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 259 LDLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 318

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 319 ARRRIVQP 326


>gi|298709323|emb|CBJ31259.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 259

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 41/64 (64%)

Query: 83  FSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
            S+K+   K  +E+   L +W+ AH +WPYP   +K +LAE T L   QI+NWF N+RKR
Sbjct: 96  ISRKRVFSKYDEETTSILTEWFLAHKRWPYPASKEKNELAEKTNLTTLQISNWFTNKRKR 155

Query: 143 HWKP 146
           HW P
Sbjct: 156 HWTP 159


>gi|295828776|gb|ADG38057.1| AT1G70510-like protein [Capsella grandiflora]
 gi|295828778|gb|ADG38058.1| AT1G70510-like protein [Capsella grandiflora]
          Length = 53

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 45/53 (84%)

Query: 52  AQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWW 104
           A +++    DR LKD+LLRKFGSHI SLKLEFSKKKKKGKLP+E+RQ LLDWW
Sbjct: 1   AHESQQIXNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWW 53


>gi|291223983|ref|XP_002731987.1| PREDICTED: PKnox transcription factor, partial [Saccoglossus
           kowalevskii]
          Length = 529

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           +K K+G LPK++   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  
Sbjct: 410 RKNKRGVLPKQATNVMRSWLFQHIVHPYPTEDEKRQIASQTNLSLLQVNNWFINARRRIL 469

Query: 145 KP 146
           +P
Sbjct: 470 QP 471


>gi|301123853|ref|XP_002909653.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262100415|gb|EEY58467.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 243

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 44/60 (73%)

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
           K+ ++ ++S + L+ W+ AH   PYP+  +++++AE TGL ++Q+ NWF N RKRHWKP+
Sbjct: 164 KRSRINRKSNEFLIAWFLAHKDNPYPSPDERVEIAEKTGLAEQQVRNWFANMRKRHWKPN 223


>gi|67523127|ref|XP_659624.1| hypothetical protein AN2020.2 [Aspergillus nidulans FGSC A4]
 gi|40745696|gb|EAA64852.1| hypothetical protein AN2020.2 [Aspergillus nidulans FGSC A4]
          Length = 280

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 38/58 (65%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           ++++G LPK   + L  W++AH   PYP+E DK  L   TGL   QI+NWFIN R+RH
Sbjct: 186 RRRRGNLPKPVTEILKAWFHAHLDHPYPSEEDKQMLMSRTGLTINQISNWFINARRRH 243


>gi|13277729|gb|AAH03762.1| Meis3 protein [Mus musculus]
 gi|74199403|dbj|BAE33220.1| unnamed protein product [Mus musculus]
          Length = 361

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 40/68 (58%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L LE  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 242 LDLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 301

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 302 ARRRIVQP 309


>gi|165855683|gb|ABY67935.1| shoot meristemless STM3 [Euphorbia esula]
          Length = 297

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 45/55 (81%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPT 114
           ED  LK +LLRK+  H+ SL+ EF KK+KKGKLPKE+RQ LLDWW+ HYKWPYP+
Sbjct: 243 EDHELKGQLLRKYSGHLCSLRQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 297


>gi|309265780|ref|XP_001476805.2| PREDICTED: homeobox protein Meis3-like isoform 1 [Mus musculus]
          Length = 361

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 40/68 (58%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L LE  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 242 LDLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 301

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 302 ARRRIVQP 309


>gi|147905075|ref|NP_001089851.1| uncharacterized protein LOC734917 [Xenopus laevis]
 gi|80476382|gb|AAI08543.1| MGC131001 protein [Xenopus laevis]
          Length = 428

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 39/65 (60%)

Query: 82  EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           E S K K+G LPK++   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+
Sbjct: 247 EGSGKNKRGVLPKQATNVMRSWLFQHIGHPYPTEDEKKQIAIQTNLTLLQVNNWFINARR 306

Query: 142 RHWKP 146
           R  +P
Sbjct: 307 RILQP 311


>gi|414867510|tpg|DAA46067.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           [Zea mays]
          Length = 612

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/81 (38%), Positives = 46/81 (56%)

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
           D+ LR+  ++   + LE    + +  LP+ +   L  W   H+  PYP++ DK  LA  T
Sbjct: 318 DQCLRQHRAYQTGVVLESQPWRPQRGLPERAVSILRAWMFEHFLHPYPSDVDKHILARQT 377

Query: 126 GLDQKQINNWFINQRKRHWKP 146
           GL + Q++NWFIN R R WKP
Sbjct: 378 GLSRSQVSNWFINARVRLWKP 398


>gi|157823970|ref|NP_001101942.1| homeobox protein Meis3 [Rattus norvegicus]
 gi|149056904|gb|EDM08335.1| Meis1, myeloid ecotropic viral integration site 1 homolog 3 (mouse)
           (predicted) [Rattus norvegicus]
          Length = 378

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 40/68 (58%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L LE  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 259 LDLERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 318

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 319 ARRRIVQP 326


>gi|452002758|gb|EMD95216.1| hypothetical protein COCHEDRAFT_10473 [Cochliobolus heterostrophus
           C5]
          Length = 306

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 40/57 (70%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           +K++G LPKE+   L DW+ A+ + PYPTE  K++L   TGL   Q++NWFIN R+R
Sbjct: 234 RKRRGNLPKEATNLLKDWFAANRQSPYPTEDQKMELCNRTGLSLNQVSNWFINARRR 290


>gi|300122037|emb|CBK22611.2| unnamed protein product [Blastocystis hominis]
          Length = 406

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 43/60 (71%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           ++++  LP  ++  L  W+  H   PYPT+A+K++L+E TGL+ ++++NWFIN+R R W+
Sbjct: 133 RRRRPNLPIYAKDILSCWFREHVDHPYPTQAEKIELSERTGLNLQKVDNWFINERSRKWR 192


>gi|46852187|gb|AAT02761.1| AhpA [Emericella nidulans]
 gi|259487387|tpe|CBF86025.1| TPA: AhpA [Source:UniProtKB/TrEMBL;Acc:Q5J1U2] [Aspergillus
           nidulans FGSC A4]
          Length = 293

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 38/58 (65%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           ++++G LPK   + L  W++AH   PYP+E DK  L   TGL   QI+NWFIN R+RH
Sbjct: 199 RRRRGNLPKPVTEILKAWFHAHLDHPYPSEEDKQMLMSRTGLTINQISNWFINARRRH 256


>gi|414879705|tpg|DAA56836.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           [Zea mays]
          Length = 587

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)

Query: 73  GSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           GS +G+     +  + +  LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q+
Sbjct: 330 GSSVGAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQV 389

Query: 133 NNWFINQRKRHWKPS-ENMH 151
           +NWFIN R R WKP  E +H
Sbjct: 390 SNWFINARVRLWKPMVEEIH 409


>gi|449448548|ref|XP_004142028.1| PREDICTED: homeobox protein BEL1 homolog [Cucumis sativus]
          Length = 657

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP++ADKL LA  TGL + Q++NWFIN R R WKP
Sbjct: 493 LPERSVNILRAWLFEHFLHPYPSDADKLLLARQTGLSRNQVSNWFINARVRLWKP 547


>gi|451847052|gb|EMD60360.1| hypothetical protein COCSADRAFT_98610 [Cochliobolus sativus ND90Pr]
          Length = 387

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 40/57 (70%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           +K++G LPKE+   L DW+ A+ + PYPTE  K++L   TGL   Q++NWFIN R+R
Sbjct: 315 RKRRGNLPKEATNLLKDWFAANRQSPYPTEDQKMELCNRTGLSLNQVSNWFINARRR 371


>gi|224132532|ref|XP_002328315.1| predicted protein [Populus trichocarpa]
 gi|222837830|gb|EEE76195.1| predicted protein [Populus trichocarpa]
          Length = 307

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP-SENM 150
           LP+ S   L  W   H+  PYPT+ADK  LA  TGL + Q++NWFIN R R WKP  E +
Sbjct: 104 LPERSVAVLRAWLFEHFLHPYPTDADKHMLATQTGLSRNQVSNWFINARVRLWKPMVEEI 163

Query: 151 HF 152
           H 
Sbjct: 164 HL 165


>gi|448537640|ref|XP_003871372.1| Cup9 protein [Candida orthopsilosis Co 90-125]
 gi|380355729|emb|CCG25247.1| Cup9 protein [Candida orthopsilosis]
          Length = 284

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 40/62 (64%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           SK+K +  LPKE    LL W N H   PYP   +K QL  +TGL+Q+Q++NWFIN R+R 
Sbjct: 211 SKRKTRNNLPKEITYVLLRWLNDHLNHPYPNSFEKNQLMMATGLNQQQLSNWFINARRRK 270

Query: 144 WK 145
            K
Sbjct: 271 IK 272


>gi|297842287|ref|XP_002889025.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334866|gb|EFH65284.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 290

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP EA+KL LA  TGL + Q++NWFIN R R WKP
Sbjct: 209 LPETSVAILRAWLFQHFLHPYPNEAEKLVLASQTGLSKNQVSNWFINARVRLWKP 263


>gi|108710915|gb|ABF98710.1| homeodomain protein JUBEL1, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 321

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 30  KFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKK 89
           +   T +     D       T+ +    R  D+ L+ +  R F  H+G ++ E  + ++ 
Sbjct: 42  QLRGTCEALGEKDAGTGSGLTKGETPRLRAIDQSLRQQ--RAF-HHMGIMEQEAWRPQRG 98

Query: 90  GKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
             LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 99  --LPERSVNILRSWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 153


>gi|145337579|ref|NP_177676.2| BEL1-like homeodomain 11 [Arabidopsis thaliana]
 gi|122244097|sp|Q1PFD1.1|BLH11_ARATH RecName: Full=BEL1-like homeodomain protein 11; Short=BEL1-like
           protein 11
 gi|91806093|gb|ABE65775.1| homeodomain-containing protein [Arabidopsis thaliana]
 gi|225898082|dbj|BAH30373.1| hypothetical protein [Arabidopsis thaliana]
 gi|332197598|gb|AEE35719.1| BEL1-like homeodomain 11 [Arabidopsis thaliana]
          Length = 290

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP EA+KL LA  TGL + Q++NWFIN R R WKP
Sbjct: 209 LPETSVAILRAWLFQHFLHPYPNEAEKLVLASQTGLSKNQVSNWFINARVRLWKP 263


>gi|15223627|ref|NP_173400.1| BEL1-like homeodomain 10 [Arabidopsis thaliana]
 gi|238478551|ref|NP_001154352.1| BEL1-like homeodomain 10 [Arabidopsis thaliana]
 gi|334182699|ref|NP_001185040.1| BEL1-like homeodomain 10 [Arabidopsis thaliana]
 gi|75263155|sp|Q9FXG8.1|BLH10_ARATH RecName: Full=BEL1-like homeodomain protein 10; Short=BEL1-like
           protein 10
 gi|10086497|gb|AAG12557.1|AC007797_17 Similar to homeodomain proteins [Arabidopsis thaliana]
 gi|45827244|gb|AAS78200.1| BEL1-like homeodomain 5 protein [Arabidopsis thaliana]
 gi|332191763|gb|AEE29884.1| BEL1-like homeodomain 10 [Arabidopsis thaliana]
 gi|332191764|gb|AEE29885.1| BEL1-like homeodomain 10 [Arabidopsis thaliana]
 gi|332191765|gb|AEE29886.1| BEL1-like homeodomain 10 [Arabidopsis thaliana]
          Length = 538

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 44  EYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDW 103
           E  G   + Q  E     R+L  +L ++   H     +  + + ++G LP+ S   L  W
Sbjct: 311 EKGGESLDEQQGERIPRLRYLDQRLRQQRALHQQLGMVRPAWRPQRG-LPENSVSVLRAW 369

Query: 104 WNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
              H+  PYP E++K+ LA+ TGL + Q+ NWFIN R R WKP
Sbjct: 370 LFEHFLHPYPKESEKIMLAKQTGLSKNQVANWFINARVRLWKP 412


>gi|302786852|ref|XP_002975197.1| KNOX transcription factor [Selaginella moellendorffii]
 gi|300157356|gb|EFJ23982.1| KNOX transcription factor [Selaginella moellendorffii]
          Length = 207

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 40/75 (53%), Gaps = 25/75 (33%)

Query: 95  ESRQTLLDWWNAHYKWPYPTEA-------------------------DKLQLAESTGLDQ 129
           E+RQ LLDWW+ H   PYP  +                         +K  LA+STGL+ 
Sbjct: 108 EARQQLLDWWSQHQDHPYPNVSFFQCVLSIPLLIFFDILLRCAGQGDEKSNLAQSTGLEP 167

Query: 130 KQINNWFINQRKRHW 144
           KQINNWFINQRKRHW
Sbjct: 168 KQINNWFINQRKRHW 182


>gi|320170617|gb|EFW47516.1| pre-B-cell leukemia transcription factor 3D [Capsaspora owczarzaki
           ATCC 30864]
          Length = 212

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)

Query: 64  LKDKLLRKFGSHIGSLKLEF-SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLA 122
           L+ +L RK  + +  LK  F   +K++  L +E++Q L DW+ AH + PYP+E++K QLA
Sbjct: 129 LEYQLKRKVYTKVIFLKSTFLDSRKRRINLSREAQQVLNDWFLAHIEHPYPSESEKEQLA 188

Query: 123 ESTGLDQKQINNWFINQRKRH 143
           + T L  +QI+ WF N+R R 
Sbjct: 189 DQTNLTMRQISTWFANKRNRQ 209


>gi|293335141|ref|NP_001168681.1| uncharacterized protein LOC100382470 [Zea mays]
 gi|223950183|gb|ACN29175.1| unknown [Zea mays]
 gi|413949054|gb|AFW81703.1| putative POX domain/homeobox DNA-binding domain family protein [Zea
           mays]
          Length = 549

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT++DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 321 LPERAVSVLRSWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 380

Query: 151 H 151
           H
Sbjct: 381 H 381


>gi|344232189|gb|EGV64068.1| hypothetical protein CANTEDRAFT_114099 [Candida tenuis ATCC 10573]
          Length = 182

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 40/66 (60%)

Query: 80  KLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQ 139
           K    K+K +  LPKE+   LL W N H   PYP   +K  L  +TGL+Q+Q++NWFIN 
Sbjct: 107 KATVEKRKTRNNLPKETTYVLLKWLNEHLNHPYPNSFEKNHLMMTTGLNQQQLSNWFINA 166

Query: 140 RKRHWK 145
           R+R  K
Sbjct: 167 RRRKIK 172


>gi|297850362|ref|XP_002893062.1| hypothetical protein ARALYDRAFT_472196 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338904|gb|EFH69321.1| hypothetical protein ARALYDRAFT_472196 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 531

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 44  EYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDW 103
           E  G   + Q  E     R+L  +L ++   H     +  + + ++G LP+ S   L  W
Sbjct: 306 EKGGESLDEQQGERIPRLRYLDQRLRQQRALHQQLGMVRPAWRPQRG-LPENSVSVLRAW 364

Query: 104 WNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
              H+  PYP E++K+ LA+ TGL + Q+ NWFIN R R WKP
Sbjct: 365 LFEHFLHPYPKESEKIMLAKQTGLSKNQVANWFINARVRLWKP 407


>gi|260945161|ref|XP_002616878.1| hypothetical protein CLUG_02322 [Clavispora lusitaniae ATCC 42720]
 gi|238848732|gb|EEQ38196.1| hypothetical protein CLUG_02322 [Clavispora lusitaniae ATCC 42720]
          Length = 203

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 40/62 (64%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S+ + +  LPKE+   LL W N H   PYP   +K +L  +TGL+Q+Q++NWFIN R+R 
Sbjct: 132 SRSRTRNNLPKETTYILLKWLNDHLNHPYPNSFEKTRLMMATGLNQQQLSNWFINARRRK 191

Query: 144 WK 145
            K
Sbjct: 192 IK 193


>gi|357505725|ref|XP_003623151.1| BEL1-like homeodomain protein [Medicago truncatula]
 gi|355498166|gb|AES79369.1| BEL1-like homeodomain protein [Medicago truncatula]
          Length = 516

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYP++ DKL LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 312 LPERAVSVLRGWLFEHFLHPYPSDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEI 371

Query: 151 H 151
           H
Sbjct: 372 H 372


>gi|32451815|gb|AAH54667.1| Pknox1.1 protein [Danio rerio]
          Length = 377

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK++   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 265 SPKNKRGVLPKQATNVMRSWLFQHIAHPYPTEEEKKQIATQTNLTLLQVNNWFINARRRI 324

Query: 144 WKP 146
            +P
Sbjct: 325 LQP 327


>gi|15224060|ref|NP_179956.1| BEL1-like homeodomain 4 [Arabidopsis thaliana]
 gi|30682185|ref|NP_850044.1| BEL1-like homeodomain 4 [Arabidopsis thaliana]
 gi|79322883|ref|NP_001031404.1| BEL1-like homeodomain 4 [Arabidopsis thaliana]
 gi|166225922|sp|Q94KL5.2|BLH4_ARATH RecName: Full=BEL1-like homeodomain protein 4; Short=BEL1-like
           protein 4; AltName: Full=Protein SAWTOOTH 2
 gi|3152608|gb|AAC17087.1| putative homeodomain transcription factor [Arabidopsis thaliana]
 gi|16648805|gb|AAL25593.1| At2g23760/F27L4.6 [Arabidopsis thaliana]
 gi|22655382|gb|AAM98283.1| At2g23760/F27L4.6 [Arabidopsis thaliana]
 gi|330252392|gb|AEC07486.1| BEL1-like homeodomain 4 [Arabidopsis thaliana]
 gi|330252393|gb|AEC07487.1| BEL1-like homeodomain 4 [Arabidopsis thaliana]
 gi|330252394|gb|AEC07488.1| BEL1-like homeodomain 4 [Arabidopsis thaliana]
          Length = 627

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 1/105 (0%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D+E +GA +           R L+  L ++   H   +  + + + ++G LP+ S   L 
Sbjct: 382 DKEAAGAASSGLTKGETPRLRLLEQSLRQQRAFHHMGMMEQEAWRPQRG-LPERSVNILR 440

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 441 AWLFEHFLNPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 485


>gi|13877513|gb|AAK43834.1|AF353092_1 BEL1-like homeobox 4 [Arabidopsis thaliana]
          Length = 627

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 1/105 (0%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D+E +GA +           R L+  L ++   H   +  + + + ++G LP+ S   L 
Sbjct: 382 DKEAAGAASSGLTKGETPRLRLLEQSLRQQRAFHHMGMMEQEAWRPQRG-LPERSVNILR 440

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 441 AWLFEHFLNPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 485


>gi|238013690|gb|ACR37880.1| unknown [Zea mays]
 gi|413945573|gb|AFW78222.1| putative POX domain/homeobox DNA-binding domain family protein [Zea
           mays]
          Length = 576

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT++DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 326 LPERAVSVLRSWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 385

Query: 151 HFAVMDNL 158
           H   M  L
Sbjct: 386 HNLEMRQL 393


>gi|242088147|ref|XP_002439906.1| hypothetical protein SORBIDRAFT_09g022270 [Sorghum bicolor]
 gi|241945191|gb|EES18336.1| hypothetical protein SORBIDRAFT_09g022270 [Sorghum bicolor]
          Length = 570

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT++DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 329 LPERAVSVLRSWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 388

Query: 151 H 151
           H
Sbjct: 389 H 389


>gi|410917578|ref|XP_003972263.1| PREDICTED: homeobox protein Meis1-like [Takifugu rubripes]
          Length = 374

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 37/60 (61%)

Query: 87  KKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           KK+G  PK +  TL  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  +P
Sbjct: 262 KKRGIFPKVATNTLRTWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 321


>gi|348523582|ref|XP_003449302.1| PREDICTED: homeobox protein meis3-like [Oreochromis niloticus]
          Length = 418

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 21/140 (15%)

Query: 9   AAWLSFFFEFIINP--SEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKD 66
           A+WL    E    P  + G  GL   +T D  + + +   G        E  + DR  ++
Sbjct: 195 ASWLREPDECATTPLGTPGTCGLPSHSTADNCSDAGDGLDGGVASPSTGEEDETDRDRRN 254

Query: 67  KLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTG 126
                               KK+G  PK +   +  W   H   PYP+E  K QL++ TG
Sbjct: 255 N-------------------KKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLSQDTG 295

Query: 127 LDQKQINNWFINQRKRHWKP 146
           L   Q+NNWFIN R+R  +P
Sbjct: 296 LTILQVNNWFINARRRIVQP 315


>gi|283969671|gb|ADB54565.1| PREP homeodomain-like protein [Schmidtea mediterranea]
          Length = 730

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 39/61 (63%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K+K+G LPK++ Q +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 252 KQKRGVLPKKATQIMKQWLFQHLVHPYPTEDEKRQIATQTNLTLLQVNNWFINARRRILQ 311

Query: 146 P 146
           P
Sbjct: 312 P 312


>gi|147817186|emb|CAN64299.1| hypothetical protein VITISV_034918 [Vitis vinifera]
          Length = 262

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 37/58 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPSEN 149
           LP+ S   L  W   H+  PYP++ADK  L+  TGL + Q++NWFIN R R WKP EN
Sbjct: 98  LPERSVNILRAWLFEHFLHPYPSDADKHLLSRQTGLSRNQVSNWFINARVRLWKPMEN 155


>gi|325188366|emb|CCA22903.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 359

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 37/60 (61%)

Query: 87  KKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           KK+  L K ++Q L  W+  H   PYPTE +K  LA   G+  +Q+NNWFIN R R WKP
Sbjct: 266 KKRTNLSKTAKQVLQQWFEEHLHHPYPTEEEKDMLAMQGGITIEQVNNWFINTRGRKWKP 325


>gi|255088575|ref|XP_002506210.1| predicted protein [Micromonas sp. RCC299]
 gi|226521481|gb|ACO67468.1| predicted protein [Micromonas sp. RCC299]
          Length = 323

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 35/49 (71%)

Query: 98  QTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           Q L DW  AH+  PYP + DK++LAE++G+ + Q+ NWFIN R R W+P
Sbjct: 261 QPLRDWLLAHFDKPYPDDEDKVKLAEASGMTRAQVGNWFINARVRIWRP 309


>gi|328876965|gb|EGG25328.1| homeobox transcription factor [Dictyostelium fasciculatum]
          Length = 586

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           KKK+GKLP E+   L +W   H   PYPTE +K+ L++ T L   QINNWF N R+R   
Sbjct: 496 KKKRGKLPGEATSILKNWLYQHNNNPYPTEDEKVDLSQKTLLSSSQINNWFTNARRR-IL 554

Query: 146 PSENMHFAVMDNLSGPL 162
           P +N H      L  PL
Sbjct: 555 PRQNQHQQFKKGLQFPL 571


>gi|83356309|gb|ABC16638.1| NVHD143-TALE class homeobox protein, partial [Nematostella
           vectensis]
          Length = 63

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 38/57 (66%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           +K++GKLP+ +R  L+ W  AH   PYPTE +K  LA  TGL   QINNWF N R+R
Sbjct: 2   RKRRGKLPESARTRLMTWLFAHSNRPYPTEEEKSNLATITGLTPIQINNWFSNARRR 58


>gi|413925649|gb|AFW65581.1| putative POX domain/homeobox DNA-binding domain family protein
           isoform 1 [Zea mays]
 gi|413925650|gb|AFW65582.1| putative POX domain/homeobox DNA-binding domain family protein
           isoform 2 [Zea mays]
 gi|413925651|gb|AFW65583.1| putative POX domain/homeobox DNA-binding domain family protein
           isoform 3 [Zea mays]
 gi|413925652|gb|AFW65584.1| putative POX domain/homeobox DNA-binding domain family protein
           isoform 4 [Zea mays]
 gi|413925653|gb|AFW65585.1| putative POX domain/homeobox DNA-binding domain family protein
           isoform 5 [Zea mays]
 gi|413925654|gb|AFW65586.1| putative POX domain/homeobox DNA-binding domain family protein
           isoform 6 [Zea mays]
          Length = 671

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 365 LPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKP 419


>gi|332021344|gb|EGI61718.1| Homeobox protein homothorax [Acromyrmex echinatior]
          Length = 485

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 17/109 (15%)

Query: 38  AASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESR 97
           AAS DEE S + T +  A                 G+H  +       ++K+G LPK++ 
Sbjct: 325 AASEDEEESASNTASNHA-----------------GNHRNNHGSARKGRQKRGVLPKQAT 367

Query: 98  QTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
             +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +P
Sbjct: 368 SIMRTWLFQHLVHPYPTEDEKRQIASQTNLTLLQVNNWFINARRRILQP 416


>gi|222615554|gb|EEE51686.1| hypothetical protein OsJ_33045 [Oryza sativa Japonica Group]
          Length = 641

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 41/66 (62%)

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
           ++ S  + +  LP+ S   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R
Sbjct: 336 MQSSAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINAR 395

Query: 141 KRHWKP 146
            R WKP
Sbjct: 396 VRLWKP 401


>gi|348556401|ref|XP_003464011.1| PREDICTED: homeobox protein PKNOX1-like [Cavia porcellus]
          Length = 436

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|390478244|ref|XP_002761501.2| PREDICTED: homeobox protein PKNOX1 [Callithrix jacchus]
          Length = 432

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 254 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 313

Query: 144 WKP 146
            +P
Sbjct: 314 LQP 316


>gi|255577084|ref|XP_002529426.1| bel1 homeotic protein, putative [Ricinus communis]
 gi|223531103|gb|EEF32952.1| bel1 homeotic protein, putative [Ricinus communis]
          Length = 864

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 37  GAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKES 96
           GA+SS  + S   T  +D       RH      +  G+++G  + +    + +  LP+ S
Sbjct: 602 GASSSKGDTSTPRTRYRDQSFH---RH------KSGGANVGIFEPQQHVWRPQRGLPERS 652

Query: 97  RQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENMH 151
              L  W   H+  PYPT+ DK  LA  TGL + Q++NWFIN R R WKP  E +H
Sbjct: 653 VAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIH 708


>gi|302785694|ref|XP_002974618.1| hypothetical protein SELMODRAFT_414952 [Selaginella moellendorffii]
 gi|300157513|gb|EFJ24138.1| hypothetical protein SELMODRAFT_414952 [Selaginella moellendorffii]
          Length = 1125

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP +ADK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 746 LPERSVSILRAWLFEHFLHPYPKDADKMMLARQTGLTRGQVSNWFINARVRLWKP 800


>gi|224042567|ref|XP_002188443.1| PREDICTED: homeobox protein PKNOX1-like [Taeniopygia guttata]
          Length = 436

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|224082920|ref|XP_002306891.1| predicted protein [Populus trichocarpa]
 gi|222856340|gb|EEE93887.1| predicted protein [Populus trichocarpa]
          Length = 383

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP E++KL LA  TGL + Q++NWFIN R R WKP
Sbjct: 292 LPETSVAILRSWLFEHFLHPYPNESEKLMLASQTGLTKNQVSNWFINARVRLWKP 346


>gi|426218365|ref|XP_004003419.1| PREDICTED: homeobox protein PKNOX1 [Ovis aries]
          Length = 436

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|194378332|dbj|BAG57916.1| unnamed protein product [Homo sapiens]
          Length = 319

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 141 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 200

Query: 144 WKP 146
            +P
Sbjct: 201 LQP 203


>gi|363728765|ref|XP_416750.3| PREDICTED: homeobox protein PKNOX1 [Gallus gallus]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|456754156|gb|JAA74231.1| PBX/knotted 1 homeobox 1 [Sus scrofa]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|449268661|gb|EMC79510.1| Homeobox protein PKNOX1 [Columba livia]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|213511136|ref|NP_001133948.1| Homeobox protein PKNOX1 [Salmo salar]
 gi|209155930|gb|ACI34197.1| Homeobox protein PKNOX1 [Salmo salar]
          Length = 446

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           SK  K+G LPK +   +  W   H   PYPTE +K QLA  T L   Q+NNWFIN R+R 
Sbjct: 279 SKSNKRGVLPKSATNIMRTWLFQHIGHPYPTEDEKKQLAIQTNLTLLQVNNWFINARRRI 338

Query: 144 WKP 146
            +P
Sbjct: 339 LQP 341


>gi|291416016|ref|XP_002724244.1| PREDICTED: homothorax-like, partial [Oryctolagus cuniculus]
          Length = 317

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 141 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 200

Query: 144 WKP 146
            +P
Sbjct: 201 LQP 203


>gi|114052336|ref|NP_001039815.1| homeobox protein PKNOX1 [Bos taurus]
 gi|115311841|sp|Q2HJ84.1|PKNX1_BOVIN RecName: Full=Homeobox protein PKNOX1; AltName: Full=PBX/knotted
           homeobox 1
 gi|87578187|gb|AAI13257.1| PBX/knotted 1 homeobox 1 [Bos taurus]
 gi|296490886|tpg|DAA32999.1| TPA: homeobox protein PKNOX1 [Bos taurus]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|355711828|gb|AES04140.1| PBX/knotted 1 homeobox 1 [Mustela putorius furo]
          Length = 262

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 85  SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 144

Query: 144 WKP 146
            +P
Sbjct: 145 LQP 147


>gi|332263375|ref|XP_003280722.1| PREDICTED: homeobox protein PKNOX1 [Nomascus leucogenys]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|283464067|gb|ADB22617.1| PKnox transcription factor [Saccoglossus kowalevskii]
          Length = 325

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           +K K+G LPK++   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  
Sbjct: 199 RKNKRGVLPKQATNVMRSWLFQHIVHPYPTEDEKRQIASQTNLSLLQVNNWFINARRRIL 258

Query: 145 KP 146
           +P
Sbjct: 259 QP 260


>gi|225430884|ref|XP_002269670.1| PREDICTED: BEL1-like homeodomain protein 4-like [Vitis vinifera]
          Length = 766

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)

Query: 62  RHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQL 121
           R L+  L ++   H   +  + + + ++G LP+ S   L  W   H+  PYP++ADK  L
Sbjct: 493 RLLEQSLRQQRAFHQMGMMEQEAWRPQRG-LPERSVNILRSWLFEHFLHPYPSDADKHLL 551

Query: 122 AESTGLDQKQINNWFINQRKRHWKP 146
           A  TGL + Q++NWFIN R R WKP
Sbjct: 552 ARQTGLSRNQVSNWFINARVRLWKP 576


>gi|2190414|emb|CAA73934.1| Prep-1 [Homo sapiens]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|344246814|gb|EGW02918.1| Homeobox protein PKNOX1 [Cricetulus griseus]
          Length = 435

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 257 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 316

Query: 144 WKP 146
            +P
Sbjct: 317 LQP 319


>gi|293330419|dbj|BAJ04690.1| BEL1-type homeodomain protein [Triticum aestivum]
          Length = 623

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ S   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 366 LPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 425

Query: 151 H 151
           H
Sbjct: 426 H 426


>gi|440895566|gb|ELR47718.1| Homeobox protein PKNOX1 [Bos grunniens mutus]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|351700685|gb|EHB03604.1| Homeobox protein PKNOX1 [Heterocephalus glaber]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|327268488|ref|XP_003219029.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein PKNOX1-like
           [Anolis carolinensis]
          Length = 434

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 256 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 315

Query: 144 WKP 146
            +P
Sbjct: 316 LQP 318


>gi|149742313|ref|XP_001491876.1| PREDICTED: homeobox protein PKNOX1-like [Equus caballus]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|413925655|gb|AFW65587.1| putative POX domain/homeobox DNA-binding domain family protein [Zea
           mays]
          Length = 635

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 329 LPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKP 383


>gi|110331887|gb|ABG67049.1| PBX/knotted 1 homeobox 1 [Bos taurus]
          Length = 430

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 252 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 311

Query: 144 WKP 146
            +P
Sbjct: 312 LQP 314


>gi|13752409|gb|AAK38646.1|AF334759_1 homeodomain protein JUBEL2 [Hordeum vulgare subsp. vulgare]
 gi|260183696|gb|ACX35970.1| bell-like homeodomain protein [Hordeum vulgare subsp. vulgare]
 gi|291464055|gb|ADE05565.1| bell-like homeodomain protein [Hordeum vulgare]
 gi|291464057|gb|ADE05566.1| bell-like homeodomain protein [Hordeum vulgare]
 gi|326499894|dbj|BAJ90782.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 611

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ S   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 351 LPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 410

Query: 151 H 151
           H
Sbjct: 411 H 411


>gi|357152962|ref|XP_003576293.1| PREDICTED: BEL1-like homeodomain protein 1-like [Brachypodium
           distachyon]
          Length = 671

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 369 LPERSVSVLRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKP 423


>gi|354484635|ref|XP_003504492.1| PREDICTED: homeobox protein PKNOX1 [Cricetulus griseus]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|260183698|gb|ACX35971.1| bell-like homeodomain protein [Hordeum vulgare subsp. vulgare]
          Length = 608

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ S   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 350 LPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 409

Query: 151 H 151
           H
Sbjct: 410 H 410


>gi|62897343|dbj|BAD96612.1| PBX/knotted 1 homeobox 1 isoform 1 variant [Homo sapiens]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|417400912|gb|JAA47372.1| Putative transcription factor meis1 [Desmodus rotundus]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATSVMRSWLFQHIGHPYPTEDEKKQIAAQTSLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|326496765|dbj|BAJ98409.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 611

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ S   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 351 LPERSVTVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 410

Query: 151 H 151
           H
Sbjct: 411 H 411


>gi|301774134|ref|XP_002922485.1| PREDICTED: homeobox protein PKNOX1-like [Ailuropoda melanoleuca]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|2052385|gb|AAC51243.1| homeobox-containing protein [Homo sapiens]
          Length = 435

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 257 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 316

Query: 144 WKP 146
            +P
Sbjct: 317 LQP 319


>gi|403271421|ref|XP_003927623.1| PREDICTED: homeobox protein PKNOX1 [Saimiri boliviensis
           boliviensis]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|386782023|ref|NP_001248218.1| homeobox protein PKNOX1 [Macaca mulatta]
 gi|355560254|gb|EHH16940.1| PBX/knotted homeobox 1 [Macaca mulatta]
 gi|355747338|gb|EHH51835.1| PBX/knotted homeobox 1 [Macaca fascicularis]
 gi|380785455|gb|AFE64603.1| homeobox protein PKNOX1 [Macaca mulatta]
 gi|383410999|gb|AFH28713.1| homeobox protein PKNOX1 [Macaca mulatta]
 gi|383411001|gb|AFH28714.1| homeobox protein PKNOX1 [Macaca mulatta]
 gi|383419217|gb|AFH32822.1| homeobox protein PKNOX1 [Macaca mulatta]
          Length = 436

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|431901451|gb|ELK08473.1| Homeobox protein PKNOX1 [Pteropus alecto]
          Length = 436

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATSVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|28866955|ref|NP_004562.2| homeobox protein PKNOX1 [Homo sapiens]
 gi|332872213|ref|XP_001142111.2| PREDICTED: homeobox protein PKNOX1 isoform 3 [Pan troglodytes]
 gi|402862248|ref|XP_003895478.1| PREDICTED: homeobox protein PKNOX1 [Papio anubis]
 gi|426393201|ref|XP_004062920.1| PREDICTED: homeobox protein PKNOX1 [Gorilla gorilla gorilla]
 gi|115311619|sp|P55347.3|PKNX1_HUMAN RecName: Full=Homeobox protein PKNOX1; AltName: Full=Homeobox
           protein PREP-1; AltName: Full=PBX/knotted homeobox 1
 gi|14043520|gb|AAH07746.1| PBX/knotted 1 homeobox 1 [Homo sapiens]
 gi|28630897|gb|AAO45825.1| homeobox-containing protein PKNOX1 [Homo sapiens]
 gi|119629923|gb|EAX09518.1| PBX/knotted 1 homeobox 1, isoform CRA_b [Homo sapiens]
 gi|123984579|gb|ABM83635.1| PBX/knotted 1 homeobox 1 [synthetic construct]
 gi|123998571|gb|ABM86887.1| PBX/knotted 1 homeobox 1 [synthetic construct]
 gi|168277612|dbj|BAG10784.1| PBX/knotted 1 homeobox 1 [synthetic construct]
 gi|410226330|gb|JAA10384.1| PBX/knotted 1 homeobox 1 [Pan troglodytes]
 gi|410258006|gb|JAA16970.1| PBX/knotted 1 homeobox 1 [Pan troglodytes]
 gi|410301414|gb|JAA29307.1| PBX/knotted 1 homeobox 1 [Pan troglodytes]
 gi|410354767|gb|JAA43987.1| PBX/knotted 1 homeobox 1 [Pan troglodytes]
 gi|410354769|gb|JAA43988.1| PBX/knotted 1 homeobox 1 [Pan troglodytes]
          Length = 436

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|74001497|ref|XP_853779.1| PREDICTED: homeobox protein PKNOX1 [Canis lupus familiaris]
          Length = 436

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|90084974|dbj|BAE91228.1| unnamed protein product [Macaca fascicularis]
          Length = 435

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 257 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 316

Query: 144 WKP 146
            +P
Sbjct: 317 LQP 319


>gi|297708035|ref|XP_002830786.1| PREDICTED: homeobox protein PKNOX1 isoform 1 [Pongo abelii]
          Length = 436

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|397506817|ref|XP_003823913.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein PKNOX1 [Pan
           paniscus]
          Length = 436

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|395851132|ref|XP_003798120.1| PREDICTED: homeobox protein PKNOX1 [Otolemur garnettii]
          Length = 436

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|354544422|emb|CCE41145.1| hypothetical protein CPAR2_301340 [Candida parapsilosis]
          Length = 313

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 39/59 (66%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           +K+K +  LPKE    LL W N H   PYP   +K QL  +TGL+Q+Q++NWFIN R+R
Sbjct: 240 NKRKTRNNLPKEITYVLLRWLNDHLNHPYPNSFEKNQLMMATGLNQQQLSNWFINARRR 298


>gi|344294745|ref|XP_003419076.1| PREDICTED: homeobox protein PKNOX1 [Loxodonta africana]
          Length = 436

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|334329335|ref|XP_001375636.2| PREDICTED: homeobox protein PKNOX1 [Monodelphis domestica]
          Length = 419

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 241 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 300

Query: 144 WKP 146
            +P
Sbjct: 301 LQP 303


>gi|149633765|ref|XP_001511504.1| PREDICTED: homeobox protein PKNOX1 [Ornithorhynchus anatinus]
          Length = 436

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|61556879|ref|NP_001013092.1| homeobox protein PKNOX1 [Rattus norvegicus]
 gi|60552173|gb|AAH91397.1| PBX/knotted 1 homeobox 1 [Rattus norvegicus]
 gi|149043568|gb|EDL97019.1| Pbx/knotted 1 homeobox [Rattus norvegicus]
          Length = 436

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|390332258|ref|XP_001197656.2| PREDICTED: homeobox protein Meis1-like [Strongylocentrotus
           purpuratus]
          Length = 434

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 43/76 (56%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  
Sbjct: 317 RQKKRGIFPKSATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 376

Query: 145 KPSENMHFAVMDNLSG 160
           +P  +     +  +SG
Sbjct: 377 QPMIDQSNRAVPGMSG 392


>gi|358338215|dbj|GAA56539.1| ubiquitin-conjugating enzyme E2 Z [Clonorchis sinensis]
          Length = 1418

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K+K+G LPK + Q +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 665 KQKRGVLPKRATQIMKQWLFQHLVHPYPTEDEKRQIATQTNLTLLQVNNWFINARRRILQ 724

Query: 146 P 146
           P
Sbjct: 725 P 725


>gi|34368580|ref|NP_057879.2| homeobox protein PKNOX1 [Mus musculus]
 gi|341942197|sp|O70477.3|PKNX1_MOUSE RecName: Full=Homeobox protein PKNOX1; AltName: Full=PBX/knotted
           homeobox 1
 gi|30931329|gb|AAH52701.1| Pbx/knotted 1 homeobox [Mus musculus]
 gi|74137138|dbj|BAE21975.1| unnamed protein product [Mus musculus]
 gi|74200022|dbj|BAE20805.1| unnamed protein product [Mus musculus]
          Length = 436

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|118343958|ref|NP_001071803.1| transcription factor protein [Ciona intestinalis]
 gi|70570981|dbj|BAE06656.1| transcription factor protein [Ciona intestinalis]
          Length = 442

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 39/62 (62%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           +K K+G LPK++ + L  W  +H   PYPTE +K  LA  T L   Q+NNWFIN R+R  
Sbjct: 252 RKTKRGVLPKQATEILRSWLFSHIVHPYPTEDEKRSLATQTNLTLLQVNNWFINARRRIL 311

Query: 145 KP 146
           +P
Sbjct: 312 QP 313


>gi|7768746|dbj|BAA95533.1| homeobox-containing protein [Homo sapiens]
          Length = 435

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 257 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 316

Query: 144 WKP 146
            +P
Sbjct: 317 LQP 319


>gi|414879706|tpg|DAA56837.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           [Zea mays]
          Length = 311

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 43/74 (58%)

Query: 73  GSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           GS +G+     +  + +  LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q+
Sbjct: 54  GSSVGAFGQPHNIWRPQRGLPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQV 113

Query: 133 NNWFINQRKRHWKP 146
           +NWFIN R R WKP
Sbjct: 114 SNWFINARVRLWKP 127


>gi|150865663|ref|XP_001384976.2| hypothetical protein PICST_32431 [Scheffersomyces stipitis CBS
           6054]
 gi|149386919|gb|ABN66947.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 290

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 38/61 (62%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           K+K +  LPKE    LL W N H   PYP   +K QL   TGL+Q+Q++NWFIN R+R  
Sbjct: 219 KRKTRNNLPKEITYILLKWLNDHLSHPYPNSFEKNQLMMMTGLNQQQLSNWFINARRRKI 278

Query: 145 K 145
           K
Sbjct: 279 K 279


>gi|395518565|ref|XP_003763430.1| PREDICTED: homeobox protein PKNOX1 [Sarcophilus harrisii]
          Length = 419

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 241 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 300

Query: 144 WKP 146
            +P
Sbjct: 301 LQP 303


>gi|330827596|ref|XP_003291859.1| hypothetical protein DICPUDRAFT_39700 [Dictyostelium purpureum]
 gi|325077920|gb|EGC31601.1| hypothetical protein DICPUDRAFT_39700 [Dictyostelium purpureum]
          Length = 130

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 37/58 (63%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           K+KK+GKLP E+   L  W   H   PYPTE +K+ LA ST L   QINNWF N R+R
Sbjct: 50  KRKKRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTSLSFNQINNWFTNARRR 107


>gi|3126849|gb|AAC15990.1| homeobox protein PKNOX1 [Mus musculus]
          Length = 435

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 257 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 316

Query: 144 WKP 146
            +P
Sbjct: 317 LQP 319


>gi|148708403|gb|EDL40350.1| Pbx/knotted 1 homeobox [Mus musculus]
          Length = 435

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 257 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 316

Query: 144 WKP 146
            +P
Sbjct: 317 LQP 319


>gi|410969869|ref|XP_003991414.1| PREDICTED: homeobox protein PKNOX1 [Felis catus]
          Length = 436

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SAKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|297825283|ref|XP_002880524.1| hypothetical protein ARALYDRAFT_900861 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326363|gb|EFH56783.1| hypothetical protein ARALYDRAFT_900861 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 614

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 1/105 (0%)

Query: 42  DEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLL 101
           D+E  GA +           R L+  L ++   H   +  + + + ++G LP+ S   L 
Sbjct: 370 DKEAGGAASSGLTKGETPRLRLLEQSLRQQRAFHHMGMMEQEAWRPQRG-LPERSVNILR 428

Query: 102 DWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 429 AWLFEHFLNPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 473


>gi|281352415|gb|EFB27999.1| hypothetical protein PANDA_011471 [Ailuropoda melanoleuca]
          Length = 420

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 242 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 301

Query: 144 WKP 146
            +P
Sbjct: 302 LQP 304


>gi|426195879|gb|EKV45808.1| hypothetical protein AGABI2DRAFT_224104 [Agaricus bisporus var.
           bisporus H97]
          Length = 632

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 41/63 (65%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           +++K+GKLPKE+   L  W + H   PYP+E +K QL  +TGL   Q++NW IN R+R  
Sbjct: 364 QQRKRGKLPKETTDFLKAWLHRHSDHPYPSEEEKKQLCHATGLSMSQVSNWMINARRRIL 423

Query: 145 KPS 147
            P+
Sbjct: 424 APA 426


>gi|353229069|emb|CCD75240.1| putative homeobox protein meis [Schistosoma mansoni]
          Length = 428

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +DR  KD ++ +  S     + +  ++KK+G  PK +   +  W   H   PYP+E  K 
Sbjct: 3   QDRSQKD-VMEELDSE---TRNDLKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKK 58

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKP 146
           QLA+ TGL   Q+NNWFIN R+R  +P
Sbjct: 59  QLAQDTGLTILQVNNWFINARRRIVQP 85


>gi|256053149|ref|XP_002570067.1| homeobox protein meis [Schistosoma mansoni]
          Length = 428

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 60  EDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKL 119
           +DR  KD ++ +  S     + +  ++KK+G  PK +   +  W   H   PYP+E  K 
Sbjct: 3   QDRSQKD-VMEELDSE---TRNDLKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKK 58

Query: 120 QLAESTGLDQKQINNWFINQRKRHWKP 146
           QLA+ TGL   Q+NNWFIN R+R  +P
Sbjct: 59  QLAQDTGLTILQVNNWFINARRRIVQP 85


>gi|409109460|gb|AFV13869.1| replumless-like protein RPL, partial [Erucaria erucarioides]
          Length = 167

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP
Sbjct: 107 LPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKP 161


>gi|321473498|gb|EFX84465.1| hypothetical protein DAPPUDRAFT_314795 [Daphnia pulex]
          Length = 356

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 38/63 (60%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LP+++   L  W   H   PYPTE +K QLA  T L   Q+NNWFIN R+R 
Sbjct: 242 SAKVKRGVLPRKATAVLRSWLFQHLVHPYPTEEEKKQLATQTKLTLLQVNNWFINARRRI 301

Query: 144 WKP 146
            +P
Sbjct: 302 LQP 304


>gi|33875797|gb|AAH00735.1| PKNOX1 protein, partial [Homo sapiens]
          Length = 336

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|326487740|dbj|BAK05542.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326495524|dbj|BAJ85858.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326503582|dbj|BAJ86297.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531470|dbj|BAJ97739.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 666

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 41/66 (62%)

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
           ++ S  + +  LP+ S   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R
Sbjct: 342 MQSSAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINAR 401

Query: 141 KRHWKP 146
            R WKP
Sbjct: 402 VRLWKP 407


>gi|66814032|ref|XP_641195.1| hypothetical protein DDB_G0280473 [Dictyostelium discoideum AX4]
 gi|74997091|sp|Q54VB4.1|HBX9_DICDI RecName: Full=Homeobox protein 9; Short=DdHbx-9
 gi|60469220|gb|EAL67215.1| hypothetical protein DDB_G0280473 [Dictyostelium discoideum AX4]
          Length = 639

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 37/58 (63%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           K+KK+GKLP E+   L  W   H   PYPTE +K+ LA ST L   QINNWF N R+R
Sbjct: 559 KRKKRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTFLSFNQINNWFTNARRR 616


>gi|348537555|ref|XP_003456259.1| PREDICTED: homeobox protein PKNOX1-like [Oreochromis niloticus]
          Length = 430

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 265 STKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIATQTNLTLLQVNNWFINARRRI 324

Query: 144 WKP 146
            +P
Sbjct: 325 LQP 327


>gi|357115612|ref|XP_003559582.1| PREDICTED: BEL1-like homeodomain protein 10-like [Brachypodium
           distachyon]
          Length = 352

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 38/55 (69%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP++S   L  W   H+  PYP++ +KL+LA STGL + QI+NWFIN R R WKP
Sbjct: 275 LPEDSVAVLRAWLFDHFLDPYPSDNEKLRLAVSTGLSRGQISNWFINARVRLWKP 329


>gi|281200802|gb|EFA75019.1| putative homeobox transcription factor [Polysphondylium pallidum
           PN500]
          Length = 565

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 37/59 (62%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           +KK+K+GKLP ES   L  W   H   PYPTE +K  LA +T L   QINNWF N R+R
Sbjct: 479 TKKRKRGKLPGESTSILKSWLFEHNMHPYPTEDEKAMLANATSLSFSQINNWFTNARRR 537


>gi|297611276|ref|NP_001065808.2| Os11g0158600 [Oryza sativa Japonica Group]
 gi|77548772|gb|ABA91569.1| Associated with HOX family protein, expressed [Oryza sativa
           Japonica Group]
 gi|218185290|gb|EEC67717.1| hypothetical protein OsI_35198 [Oryza sativa Indica Group]
 gi|255679809|dbj|BAF27653.2| Os11g0158600 [Oryza sativa Japonica Group]
          Length = 678

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 41/66 (62%)

Query: 81  LEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQR 140
           ++ S  + +  LP+ S   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R
Sbjct: 358 MQSSAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINAR 417

Query: 141 KRHWKP 146
            R WKP
Sbjct: 418 VRLWKP 423


>gi|241957369|ref|XP_002421404.1| homeobox-containing transcription factor, putative [Candida
           dubliniensis CD36]
 gi|223644748|emb|CAX40739.1| homeobox-containing transcription factor, putative [Candida
           dubliniensis CD36]
          Length = 357

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           +K +  LPKE    LL W N H   PYP+  +K QL  STGL+Q+Q++NWFIN R+R  K
Sbjct: 288 RKTRNNLPKEITYILLRWLNDHLNHPYPSSFEKNQLMISTGLNQQQLSNWFINARRRKIK 347


>gi|224081519|ref|XP_002306443.1| predicted protein [Populus trichocarpa]
 gi|222855892|gb|EEE93439.1| predicted protein [Populus trichocarpa]
          Length = 828

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 11/112 (9%)

Query: 35  KDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPK 94
           KDGA +S      A T+ +    +  ++ L+ +  R F + +G ++ E  + ++   LP+
Sbjct: 528 KDGAGTS------AITKGETPRLKLLEQSLRQQ--RAF-NQMGMMEQEAWRPQRG--LPE 576

Query: 95  ESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 577 RSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 628


>gi|409109446|gb|AFV13862.1| replumless-like protein RPL, partial [Cakile lanceolata]
          Length = 171

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ +   L  W   H+  PYPT+ DKL LA+ TGL + Q++NWFIN R R WKP
Sbjct: 112 LPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKP 166


>gi|409078971|gb|EKM79333.1| hypothetical protein AGABI1DRAFT_106860 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 613

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 41/63 (65%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           +++K+GKLPKE+   L  W + H   PYP+E +K QL  +TGL   Q++NW IN R+R  
Sbjct: 364 QQRKRGKLPKETTDFLKAWLHRHSDHPYPSEEEKKQLCHATGLSMSQVSNWMINARRRIL 423

Query: 145 KPS 147
            P+
Sbjct: 424 APA 426


>gi|395328631|gb|EJF61022.1| hypothetical protein DICSQDRAFT_180997 [Dichomitus squalens
           LYAD-421 SS1]
          Length = 658

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 40/64 (62%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           ++K+GKLPK     L DW + H   PYP+E +K QL  +TGL   Q++NW IN R+R   
Sbjct: 379 QRKRGKLPKPVTDFLKDWLHRHSDHPYPSEEEKKQLCHATGLSMSQVSNWMINARRRILA 438

Query: 146 PSEN 149
           P+ +
Sbjct: 439 PARH 442


>gi|258569963|ref|XP_002543785.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237904055|gb|EEP78456.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 329

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 59/135 (43%), Gaps = 8/135 (5%)

Query: 9   AAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKL 68
           A + S     I + + G  G   S     A  S + Y G E E+          H  D  
Sbjct: 167 AGYASSRSSTIGSMAHGTAGPYPSAYNSPAHGSYQSYYGGEHESA------AQSHFTDAK 220

Query: 69  LRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLD 128
             K+ S   S   +   KK++G LPK +   L  W+  H   PYP+E DK      TGL 
Sbjct: 221 STKYDSFGDSA--DSKSKKRRGNLPKPTTDILRAWFYEHLDHPYPSEQDKQMFITRTGLT 278

Query: 129 QKQINNWFINQRKRH 143
             QI+NWFIN R+RH
Sbjct: 279 ISQISNWFINARRRH 293


>gi|402902713|ref|XP_003914241.1| PREDICTED: homeobox protein TGIF1-like isoform 3 [Papio anubis]
          Length = 312

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 19/140 (13%)

Query: 3   CLYLPFAAWLSFFFEFIINPSEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDR 62
           C  L   A  +  F+ I      C+G + +  +    SS    + + +E +D ++ D   
Sbjct: 12  CFSLECLASFNNCFDMI------CSGKRCALARSSLTSSQGIVAASGSETEDEDSMD--- 62

Query: 63  HLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLA 122
                +     S  GS      K++++G LPKES Q L DW   H    YP+E +K  L+
Sbjct: 63  -----IPLDLSSSAGS-----GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLS 112

Query: 123 ESTGLDQKQINNWFINQRKR 142
           + T L   Q+ NWFIN R+R
Sbjct: 113 QQTHLSTLQVCNWFINARRR 132


>gi|224008889|ref|XP_002293403.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220970803|gb|EED89139.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 210

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 2/65 (3%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNA--HYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           S+K K   LP+E+   L  W  +  H   PYPTE +K ++   TG++ KQ+ NWF+N RK
Sbjct: 20  SRKPKSASLPQETVDYLKAWMMSPEHISHPYPTEQEKAEIMAETGIELKQLTNWFVNNRK 79

Query: 142 RHWKP 146
           R+WKP
Sbjct: 80  RYWKP 84


>gi|449448862|ref|XP_004142184.1| PREDICTED: BEL1-like homeodomain protein 9-like [Cucumis sativus]
          Length = 461

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           + ++G LP+ +   L  W   H+  PYPT+ DKL LA  TGL + Q++NWFIN R R WK
Sbjct: 266 RPQRG-LPESAVTILRAWLFEHFLHPYPTDTDKLMLANQTGLSRSQVSNWFINARVRLWK 324

Query: 146 P-SENMH 151
           P  E +H
Sbjct: 325 PMVEEIH 331


>gi|357125864|ref|XP_003564609.1| PREDICTED: BEL1-like homeodomain protein 6-like [Brachypodium
           distachyon]
          Length = 612

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ S   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 380 LPERSVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 439

Query: 151 H 151
           H
Sbjct: 440 H 440


>gi|356509553|ref|XP_003523512.1| PREDICTED: BEL1-like homeodomain protein 6-like [Glycine max]
          Length = 759

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 398 LPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 452


>gi|242070089|ref|XP_002450321.1| hypothetical protein SORBIDRAFT_05g003750 [Sorghum bicolor]
 gi|241936164|gb|EES09309.1| hypothetical protein SORBIDRAFT_05g003750 [Sorghum bicolor]
          Length = 690

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 372 LPERSVSILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKP 426


>gi|348557700|ref|XP_003464657.1| PREDICTED: homeobox protein Meis3-like isoform 1 [Cavia porcellus]
          Length = 375

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 256 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 315

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 316 ARRRIVQP 323


>gi|297735226|emb|CBI17588.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 474 LPERSVNILRSWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 528


>gi|392566448|gb|EIW59624.1| hypothetical protein TRAVEDRAFT_46929 [Trametes versicolor
           FP-101664 SS1]
          Length = 639

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 40/64 (62%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           ++K+GKLPK     L DW + H   PYP+E +K QL  +TGL   Q++NW IN R+R   
Sbjct: 366 QRKRGKLPKPVTDFLKDWLHRHSDHPYPSEEEKKQLCHATGLSMSQVSNWMINARRRILA 425

Query: 146 PSEN 149
           P+ +
Sbjct: 426 PARH 429


>gi|115464243|ref|NP_001055721.1| Os05g0455200 [Oryza sativa Japonica Group]
 gi|53749351|gb|AAU90210.1| putative homeodomain protein [Oryza sativa Japonica Group]
 gi|113579272|dbj|BAF17635.1| Os05g0455200 [Oryza sativa Japonica Group]
 gi|215704800|dbj|BAG94828.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 580

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT++DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 345 LPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 404

Query: 151 HFAVMDNL 158
           H   M  L
Sbjct: 405 HNLEMRQL 412


>gi|222631815|gb|EEE63947.1| hypothetical protein OsJ_18772 [Oryza sativa Japonica Group]
          Length = 603

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT++DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 368 LPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 427

Query: 151 HFAVMDNL 158
           H   M  L
Sbjct: 428 HNLEMRQL 435


>gi|330929058|ref|XP_003302504.1| hypothetical protein PTT_14339 [Pyrenophora teres f. teres 0-1]
 gi|311322114|gb|EFQ89405.1| hypothetical protein PTT_14339 [Pyrenophora teres f. teres 0-1]
          Length = 426

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           +K++G LPKE+   L +W+  + + PYPTE  KL+L   TGL   Q++NWFIN R+R
Sbjct: 354 RKRRGNLPKEATNMLKEWFQQNRQSPYPTEDQKLELCNRTGLSLNQVSNWFINARRR 410


>gi|308220142|gb|ADO22643.1| TALE class homeobox transcription factor Pknox [Mnemiopsis leidyi]
          Length = 1112

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 40/62 (64%)

Query: 88   KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS 147
            ++G LPK + + + DW   H   PYP+E +K ++A+ TGL   Q+NNWFIN R+R  +P 
Sbjct: 957  RRGILPKAATEQMKDWLFKHLGHPYPSEDEKRKIAQQTGLTILQVNNWFINARRRILQPM 1016

Query: 148  EN 149
             N
Sbjct: 1017 MN 1018


>gi|147766087|emb|CAN65695.1| hypothetical protein VITISV_001986 [Vitis vinifera]
          Length = 533

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP +++KL LA  TGL + Q++NWFIN R R WKP
Sbjct: 359 LPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKP 413


>gi|348557702|ref|XP_003464658.1| PREDICTED: homeobox protein Meis3-like isoform 2 [Cavia porcellus]
          Length = 358

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 239 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 298

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 299 ARRRIVQP 306


>gi|146332297|gb|ABQ22654.1| homeobox protein PKNOX1-like protein [Callithrix jacchus]
          Length = 210

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 32  SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 91

Query: 144 WKP 146
            +P
Sbjct: 92  LQP 94


>gi|20147189|gb|AAM09846.1| MEIS1-related protein 2 [Homo sapiens]
          Length = 267

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 148 LDQERRRNKKRGIFPKVATNIMRAWLVQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 207

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 208 ARRRIVQP 215


>gi|449436609|ref|XP_004136085.1| PREDICTED: BEL1-like homeodomain protein 3-like [Cucumis sativus]
 gi|449491145|ref|XP_004158813.1| PREDICTED: BEL1-like homeodomain protein 3-like [Cucumis sativus]
          Length = 548

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 9/113 (7%)

Query: 34  TKDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLP 93
           T+      D  +SG E   +    R  D+HL+ +   +   H+G      S + ++G LP
Sbjct: 306 TRRALGEQDSLHSGQEGIPR---LRFVDQHLRQQ---RALQHLGVTP--HSWRPQRG-LP 356

Query: 94  KESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           + S   L  W   H+  PYP +++KL+LA  TGL + Q+ NWFIN R R WKP
Sbjct: 357 ESSVSILRAWLFEHFLHPYPKDSEKLKLARQTGLTRNQVANWFINARVRLWKP 409


>gi|224103365|ref|XP_002313027.1| predicted protein [Populus trichocarpa]
 gi|222849435|gb|EEE86982.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 215 LPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 269


>gi|225458165|ref|XP_002281033.1| PREDICTED: BEL1-like homeodomain protein 11 [Vitis vinifera]
 gi|302142555|emb|CBI19758.3| unnamed protein product [Vitis vinifera]
          Length = 470

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP +++KL LA  TGL + Q++NWFIN R R WKP
Sbjct: 376 LPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKP 430


>gi|238883362|gb|EEQ47000.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 344

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 40/62 (64%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           + +K +  LPKE    LL W N H   PYP+  +K QL  STGL+Q+Q++NWFIN R+R 
Sbjct: 273 NNRKTRNNLPKEITFILLQWLNDHLNHPYPSSFEKNQLMISTGLNQQQLSNWFINARRRK 332

Query: 144 WK 145
            K
Sbjct: 333 IK 334


>gi|38490426|emb|CAD57729.1| homothorax 2 [Cupiennius salei]
          Length = 471

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  
Sbjct: 305 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 364

Query: 145 KP 146
           +P
Sbjct: 365 QP 366


>gi|431920832|gb|ELK18605.1| Homeobox protein Meis3, partial [Pteropus alecto]
          Length = 390

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 280 LDQERRRNKKRGIFPKAATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 339

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 340 ARRRIVQP 347


>gi|119629922|gb|EAX09517.1| PBX/knotted 1 homeobox 1, isoform CRA_a [Homo sapiens]
          Length = 402

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|27435580|gb|AAN34940.1| PKNOX1B [Homo sapiens]
          Length = 405

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317

Query: 144 WKP 146
            +P
Sbjct: 318 LQP 320


>gi|432892299|ref|XP_004075752.1| PREDICTED: homeobox protein meis3-B-like [Oryzias latipes]
          Length = 456

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 58/140 (41%), Gaps = 21/140 (15%)

Query: 9   AAWLSFFFEFIINP--SEGCTGLKFSNTKDGAASSDEEYSGAETEAQDAEARDEDRHLKD 66
            +WL    E    P  + G  GL   +T D  + + +   G        E  + DR  ++
Sbjct: 233 VSWLREPDECATTPLGTPGTCGLPSHSTADNCSDAGDGLDGGVASPSTGEEDESDRDRRN 292

Query: 67  KLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTG 126
                               KK+G  PK +   +  W   H   PYP+E  K QL++ TG
Sbjct: 293 N-------------------KKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLSQDTG 333

Query: 127 LDQKQINNWFINQRKRHWKP 146
           L   Q+NNWFIN R+R  +P
Sbjct: 334 LTILQVNNWFINARRRIVQP 353


>gi|449515961|ref|XP_004165016.1| PREDICTED: uncharacterized protein LOC101228800 [Cucumis sativus]
          Length = 737

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)

Query: 75  HIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINN 134
           +IG L+ + + + ++G LP+ +   L  W   H+  PYPT+ DK  LA  TGL + Q++N
Sbjct: 505 NIGFLESQNAWRPQRG-LPERAVAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSN 563

Query: 135 WFINQRKRHWKPS-ENMH 151
           WFIN R R WKP  E +H
Sbjct: 564 WFINARVRVWKPMVEEIH 581


>gi|356495440|ref|XP_003516585.1| PREDICTED: LOW QUALITY PROTEIN: BEL1-like homeodomain protein
           2-like [Glycine max]
          Length = 700

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 10/112 (8%)

Query: 35  KDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPK 94
           KDGA SS     G  T+ +    +  ++ L+ +  R F   +G ++ E  + ++   LP+
Sbjct: 416 KDGAGSS-----GGLTKGETPRLKMLEQSLRQQ--RAF-HQMGMMEQEAWRPQRG--LPE 465

Query: 95  ESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 466 RSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 517


>gi|348538166|ref|XP_003456563.1| PREDICTED: homeobox protein Meis1-like [Oreochromis niloticus]
          Length = 393

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S  KK+G  PK +   L  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R 
Sbjct: 274 SHNKKRGIFPKVATNILRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI 333

Query: 144 WKP 146
            +P
Sbjct: 334 VQP 336


>gi|68469130|ref|XP_721352.1| hypothetical protein CaO19.6514 [Candida albicans SC5314]
 gi|68470155|ref|XP_720839.1| hypothetical protein CaO19.13867 [Candida albicans SC5314]
 gi|77022760|ref|XP_888824.1| hypothetical protein CaO19_6514 [Candida albicans SC5314]
 gi|46442729|gb|EAL02016.1| hypothetical protein CaO19.13867 [Candida albicans SC5314]
 gi|46443267|gb|EAL02550.1| hypothetical protein CaO19.6514 [Candida albicans SC5314]
 gi|76573637|dbj|BAE44721.1| hypothetical protein [Candida albicans]
          Length = 344

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 40/62 (64%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           + +K +  LPKE    LL W N H   PYP+  +K QL  STGL+Q+Q++NWFIN R+R 
Sbjct: 273 NNRKTRNNLPKEITFILLQWLNDHLNHPYPSSFEKNQLMISTGLNQQQLSNWFINARRRK 332

Query: 144 WK 145
            K
Sbjct: 333 IK 334


>gi|297805504|ref|XP_002870636.1| hypothetical protein ARALYDRAFT_493837 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316472|gb|EFH46895.1| hypothetical protein ARALYDRAFT_493837 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 606

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 31  FSNTKDGAASSDEEYSGA------ETEAQDAEARDEDRHLK--DKLLRKFGSHIGSLKLE 82
           F   KDG     +  S A      +  A    AR E   L+  D+ LR+  S+     ++
Sbjct: 324 FRCLKDGLVGQIQATSQALGEREEDNRAVSIAARGETPRLRLLDQALRQQKSYRQMTLVD 383

Query: 83  FSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
               + +  LP+ +  TL  W   H+  PYP++ DK  LA  TGL + Q++NWFIN R R
Sbjct: 384 AHPWRPQRGLPERAVTTLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 443

Query: 143 HWKP 146
            WKP
Sbjct: 444 LWKP 447


>gi|444730789|gb|ELW71163.1| Homeobox protein Meis3 [Tupaia chinensis]
          Length = 374

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 255 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 314

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 315 ARRRIVQP 322


>gi|59803105|sp|Q99687.3|MEIS3_HUMAN RecName: Full=Homeobox protein Meis3; AltName: Full=Meis1-related
           protein 2
 gi|119577882|gb|EAW57478.1| Meis1, myeloid ecotropic viral integration site 1 homolog 3
           (mouse), isoform CRA_a [Homo sapiens]
 gi|119577883|gb|EAW57479.1| Meis1, myeloid ecotropic viral integration site 1 homolog 3
           (mouse), isoform CRA_a [Homo sapiens]
          Length = 375

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 256 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 315

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 316 ARRRIVQP 323


>gi|15238073|ref|NP_198957.1| homeobox protein BEL1-like protein [Arabidopsis thaliana]
 gi|75220706|sp|Q38897.2|BEL1_ARATH RecName: Full=Homeobox protein BEL1 homolog
 gi|9758050|dbj|BAB08513.1| homeotic protein BEL1 homolog [Arabidopsis thaliana]
 gi|15146193|gb|AAK83580.1| AT5g41410/MYC6_12 [Arabidopsis thaliana]
 gi|27363268|gb|AAO11553.1| At5g41410/MYC6_12 [Arabidopsis thaliana]
 gi|28202125|gb|AAB05099.2| homeobox protein [Arabidopsis thaliana]
 gi|332007293|gb|AED94676.1| homeobox protein BEL1-like protein [Arabidopsis thaliana]
          Length = 611

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 31  FSNTKDGAASSDEEYSGA------ETEAQDAEARDEDRHLK--DKLLRKFGSHIGSLKLE 82
           F   KDG     +  S A      +  A    AR E   L+  D+ LR+  S+     ++
Sbjct: 329 FRCLKDGLVGQIQATSQALGEREEDNRAVSIAARGETPRLRLLDQALRQQKSYRQMTLVD 388

Query: 83  FSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
               + +  LP+ +  TL  W   H+  PYP++ DK  LA  TGL + Q++NWFIN R R
Sbjct: 389 AHPWRPQRGLPERAVTTLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 448

Query: 143 HWKP 146
            WKP
Sbjct: 449 LWKP 452


>gi|449443345|ref|XP_004139440.1| PREDICTED: uncharacterized protein LOC101214235 [Cucumis sativus]
          Length = 737

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)

Query: 75  HIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINN 134
           +IG L+ + + + ++G LP+ +   L  W   H+  PYPT+ DK  LA  TGL + Q++N
Sbjct: 505 NIGFLESQNAWRPQRG-LPERAVAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSN 563

Query: 135 WFINQRKRHWKPS-ENMH 151
           WFIN R R WKP  E +H
Sbjct: 564 WFINARVRVWKPMVEEIH 581


>gi|18859011|ref|NP_570985.1| myeloid ecotropic viral integration site 2b [Danio rerio]
 gi|6671101|gb|AAF23096.1| meis2 [Danio rerio]
          Length = 393

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  
Sbjct: 275 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTNLQVNNWFINARRRIV 334

Query: 145 KP 146
           +P
Sbjct: 335 QP 336


>gi|355702131|gb|AES01831.1| Meis homeobox 3 [Mustela putorius furo]
          Length = 305

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 202 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 261

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 262 ARRRIVQP 269


>gi|332257226|ref|XP_003277712.1| PREDICTED: homeobox protein Meis3, partial [Nomascus leucogenys]
          Length = 366

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 205 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 264

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 265 ARRRIVQP 272


>gi|426243069|ref|XP_004015387.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein Meis3 [Ovis aries]
          Length = 377

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 258 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 317

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 318 ARRRIVQP 325


>gi|358336425|dbj|GAA54938.1| putative homeobox protein Meis3-like 1 [Clonorchis sinensis]
          Length = 395

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%)

Query: 80  KLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQ 139
           + +  ++KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN 
Sbjct: 59  RSDLKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINA 118

Query: 140 RKRHWKP 146
           R+R  +P
Sbjct: 119 RRRIVQP 125


>gi|345785594|ref|XP_541536.3| PREDICTED: homeobox protein Meis3 [Canis lupus familiaris]
          Length = 385

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 266 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 325

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 326 ARRRIVQP 333


>gi|301775334|ref|XP_002923102.1| PREDICTED: homeobox protein Meis3-like [Ailuropoda melanoleuca]
          Length = 406

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 287 LDQEPRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 346

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 347 ARRRIVQP 354


>gi|22652119|gb|AAN03623.1|AF406699_1 BEL1-related homeotic protein 13 [Solanum tuberosum]
          Length = 567

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP  E+M
Sbjct: 348 LPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDM 407

Query: 151 H 151
           +
Sbjct: 408 Y 408


>gi|444731888|gb|ELW72223.1| Homeobox protein PKNOX2 [Tupaia chinensis]
          Length = 535

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/61 (45%), Positives = 37/61 (60%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK++   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 351 KSKRGVLPKQATNIMRSWLFQHLMHPYPTEDEKRQIAAQTSLTLLQVNNWFINARRRILQ 410

Query: 146 P 146
           P
Sbjct: 411 P 411


>gi|359478712|ref|XP_002282519.2| PREDICTED: uncharacterized protein LOC100255350 [Vitis vinifera]
          Length = 846

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 44/74 (59%)

Query: 73  GSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           G+++G L+ +    + +  LP+ +   L  W   H+  PYPT+ DK  LA  TGL + Q+
Sbjct: 617 GANLGFLEPQQHVWRPQRGLPERAVAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQV 676

Query: 133 NNWFINQRKRHWKP 146
           +NWFIN R R WKP
Sbjct: 677 SNWFINARVRVWKP 690


>gi|189192330|ref|XP_001932504.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187974110|gb|EDU41609.1| predicted protein [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 422

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 2/72 (2%)

Query: 71  KFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQK 130
           +F  H+G     F++K++ G LPKE+   L +W+  + + PYPTE  K++L   TGL   
Sbjct: 337 RFQQHVGP-DHAFNRKRR-GNLPKEATNMLKEWFQQNRQSPYPTEDQKMELCNRTGLSLN 394

Query: 131 QINNWFINQRKR 142
           Q++NWFIN R+R
Sbjct: 395 QVSNWFINARRR 406


>gi|406864515|gb|EKD17560.1| homeobox domain-containing protein [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 443

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           +K++G LPKE+   L  W+ +H + PYP+E +K  L   TGL   QI+NWFIN R+R
Sbjct: 315 RKRRGNLPKETTDILRAWFMSHLQHPYPSEDEKQSLMRQTGLAMNQISNWFINARRR 371


>gi|226508164|ref|NP_001140490.1| uncharacterized protein LOC100272551 [Zea mays]
 gi|223973299|gb|ACN30837.1| unknown [Zea mays]
          Length = 486

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP-SENM 150
           LP+ +   L  W   H+  PYPT++DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 236 LPERAVSVLRSWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 295

Query: 151 HFAVMDNL 158
           H   M  L
Sbjct: 296 HNLEMRQL 303


>gi|395854233|ref|XP_003799602.1| PREDICTED: homeobox protein Meis3 [Otolemur garnettii]
          Length = 361

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 242 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 301

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 302 ARRRIVQP 309


>gi|359475104|ref|XP_003631586.1| PREDICTED: BEL1-like homeodomain protein 3-like [Vitis vinifera]
          Length = 691

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 418 LPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 472


>gi|255543785|ref|XP_002512955.1| bel1 homeotic protein, putative [Ricinus communis]
 gi|223547966|gb|EEF49458.1| bel1 homeotic protein, putative [Ricinus communis]
          Length = 677

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 405 LPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 459


>gi|338710551|ref|XP_001503225.3| PREDICTED: homeobox protein Meis3 isoform 1 [Equus caballus]
          Length = 361

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 242 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 301

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 302 ARRRIVQP 309


>gi|326496477|dbj|BAJ94700.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 580

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT++DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 334 LPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 393

Query: 151 H 151
           H
Sbjct: 394 H 394


>gi|410222180|gb|JAA08309.1| Meis homeobox 3 [Pan troglodytes]
 gi|410263522|gb|JAA19727.1| Meis homeobox 3 [Pan troglodytes]
 gi|410303028|gb|JAA30114.1| Meis homeobox 3 [Pan troglodytes]
          Length = 358

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 239 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 298

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 299 ARRRIVQP 306


>gi|57863279|ref|NP_001009813.1| homeobox protein Meis3 isoform 2 [Homo sapiens]
 gi|46623338|gb|AAH69251.1| Meis homeobox 3 [Homo sapiens]
 gi|119577884|gb|EAW57480.1| Meis1, myeloid ecotropic viral integration site 1 homolog 3
           (mouse), isoform CRA_b [Homo sapiens]
 gi|119577885|gb|EAW57481.1| Meis1, myeloid ecotropic viral integration site 1 homolog 3
           (mouse), isoform CRA_b [Homo sapiens]
 gi|119577887|gb|EAW57483.1| Meis1, myeloid ecotropic viral integration site 1 homolog 3
           (mouse), isoform CRA_b [Homo sapiens]
 gi|208966738|dbj|BAG73383.1| Meis homeobox 3 [synthetic construct]
          Length = 358

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 239 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 298

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 299 ARRRIVQP 306


>gi|300798196|ref|NP_001180081.1| homeobox protein Meis3 [Bos taurus]
 gi|296477580|tpg|DAA19695.1| TPA: Meis1, myeloid ecotropic viral integration site 1 homolog
           3-like [Bos taurus]
          Length = 359

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 240 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 299

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 300 ARRRIVQP 307


>gi|293330417|dbj|BAJ04689.1| BEL1-type homeodomain protein [Triticum aestivum]
          Length = 580

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT++DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 337 LPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 396

Query: 151 H 151
           H
Sbjct: 397 H 397


>gi|169647567|gb|ACA61780.1| BIPINNATA [Solanum lycopersicum]
          Length = 675

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP  E+M
Sbjct: 504 LPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDM 563

Query: 151 H 151
           +
Sbjct: 564 Y 564


>gi|312282173|dbj|BAJ33952.1| unnamed protein product [Thellungiella halophila]
          Length = 597

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 31  FSNTKDGAASSDEEYSGA------ETEAQDAEARDEDRHLK--DKLLRKFGSHIGSLKLE 82
           F   KDG     +  S A      +  A    AR E   L+  D+ LR+  S+     +E
Sbjct: 321 FRCLKDGLVGQIQATSQALGERDEDNRAASISARGETPRLRLLDQALRQQKSYRQMSLVE 380

Query: 83  FSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
               + +  LP+ +  TL  W   H+  PYP++ DK  LA  TGL + Q++NWFIN R R
Sbjct: 381 AHPWRPQRGLPERAVTTLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 440

Query: 143 HWKP 146
            WKP
Sbjct: 441 LWKP 444


>gi|302833171|ref|XP_002948149.1| homeodomain protein [Volvox carteri f. nagariensis]
 gi|300266369|gb|EFJ50556.1| homeodomain protein [Volvox carteri f. nagariensis]
          Length = 508

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 38/61 (62%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           KK +  LP+ + Q+L  W   H   PYP+E +K  L  +TGLD  Q+NNWFIN R R WK
Sbjct: 385 KKGRENLPRAAVQSLKLWVFNHIVHPYPSEDEKEVLCANTGLDLLQLNNWFINARVRIWK 444

Query: 146 P 146
           P
Sbjct: 445 P 445


>gi|449464694|ref|XP_004150064.1| PREDICTED: BEL1-like homeodomain protein 6-like [Cucumis sativus]
          Length = 681

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 412 LPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 466


>gi|31746344|emb|CAC82981.1| putative BEL1-like protein [Gnetum gnemon]
          Length = 900

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 75  HIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINN 134
           H+G L+ + + + ++G LP+ +   L  W   H+  PYPT+ADK  LA  TGL + Q++N
Sbjct: 578 HLGMLE-QHAWRPQRG-LPERAVSVLRAWLFEHFLHPYPTDADKHMLARQTGLSRSQVSN 635

Query: 135 WFINQRKRHWKP 146
           WFIN R   WKP
Sbjct: 636 WFINARVGLWKP 647


>gi|312282063|dbj|BAJ33897.1| unnamed protein product [Thellungiella halophila]
          Length = 651

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)

Query: 75  HIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINN 134
           H+G ++ E  + ++   LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++N
Sbjct: 426 HMGMMEQEAWRPQRG--LPERSVNILRAWLFEHFLNPYPSDADKHLLARQTGLSRNQVSN 483

Query: 135 WFINQRKRHWKP 146
           WFIN R R WKP
Sbjct: 484 WFINARVRLWKP 495


>gi|222616675|gb|EEE52807.1| hypothetical protein OsJ_35304 [Oryza sativa Japonica Group]
          Length = 591

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ +   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 298 LPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKP 352


>gi|8977894|emb|CAB95771.1| hypothetical protein [Homo sapiens]
 gi|51477057|emb|CAH18472.1| hypothetical protein [Homo sapiens]
          Length = 382

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 263 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 322

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 323 ARRRIVQP 330


>gi|125535858|gb|EAY82346.1| hypothetical protein OsI_37556 [Oryza sativa Indica Group]
          Length = 654

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ +   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 360 LPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKP 414


>gi|449532423|ref|XP_004173180.1| PREDICTED: BEL1-like homeodomain protein 9-like [Cucumis sativus]
          Length = 271

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           + ++G LP+ +   L  W   H+  PYPT+ DKL LA  TGL + Q++NWFIN R R WK
Sbjct: 76  RPQRG-LPESAVTILRAWLFEHFLHPYPTDTDKLMLANQTGLSRSQVSNWFINARVRLWK 134

Query: 146 P 146
           P
Sbjct: 135 P 135


>gi|356540714|ref|XP_003538830.1| PREDICTED: BEL1-like homeodomain protein 2-like [Glycine max]
          Length = 705

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 10/112 (8%)

Query: 35  KDGAASSDEEYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPK 94
           KDGA +S     G  T+ +    +  ++ L+ +  R F   +G ++ E  + ++   LP+
Sbjct: 411 KDGAGNS-----GGLTKGETPRLKMLEQSLRQQ--RAF-HQMGMMEQEAWRPQRG--LPE 460

Query: 95  ESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 461 RSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 512


>gi|449532899|ref|XP_004173415.1| PREDICTED: BEL1-like homeodomain protein 6-like [Cucumis sativus]
          Length = 681

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 412 LPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 466


>gi|356561267|ref|XP_003548904.1| PREDICTED: BEL1-like homeodomain protein 2-like [Glycine max]
          Length = 754

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 535 LPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 589


>gi|224080389|ref|XP_002306123.1| predicted protein [Populus trichocarpa]
 gi|222849087|gb|EEE86634.1| predicted protein [Populus trichocarpa]
          Length = 413

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 195 LPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 249


>gi|125804420|ref|XP_707868.2| PREDICTED: homeobox protein PKNOX1 isoform 3 [Danio rerio]
          Length = 445

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 37/63 (58%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 274 SSKAKRGILPKHATNVMRSWLFQHIGHPYPTEDEKKQIALQTNLTLLQVNNWFINARRRI 333

Query: 144 WKP 146
            +P
Sbjct: 334 LQP 336


>gi|168054022|ref|XP_001779432.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669117|gb|EDQ55710.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1060

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ +   L  W   H+  PYP + DKL LA+ TGL + Q++NWFIN R R WKP
Sbjct: 667 LPERAVSVLRAWLFEHFLHPYPKDVDKLSLAKQTGLTRSQVSNWFINARVRLWKP 721


>gi|147787771|emb|CAN62927.1| hypothetical protein VITISV_029711 [Vitis vinifera]
          Length = 874

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 44/74 (59%)

Query: 73  GSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           G+++G L+ +    + +  LP+ +   L  W   H+  PYPT+ DK  LA  TGL + Q+
Sbjct: 645 GANLGFLEPQQHVWRPQRGLPERAVAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQV 704

Query: 133 NNWFINQRKRHWKP 146
           +NWFIN R R WKP
Sbjct: 705 SNWFINARVRVWKP 718


>gi|224096886|ref|XP_002310774.1| predicted protein [Populus trichocarpa]
 gi|222853677|gb|EEE91224.1| predicted protein [Populus trichocarpa]
          Length = 629

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP  E+M
Sbjct: 442 LPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDM 501

Query: 151 H 151
           +
Sbjct: 502 Y 502


>gi|440901765|gb|ELR52651.1| Homeobox protein Meis3, partial [Bos grunniens mutus]
          Length = 363

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 244 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 303

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 304 ARRRIVQP 311


>gi|187940724|gb|ACD39463.1| BEL30 protein [Solanum etuberosum]
          Length = 645

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 398 LPESSVSVLRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 452


>gi|297744767|emb|CBI38029.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 368 LPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 422


>gi|380814822|gb|AFE79285.1| homeobox protein Meis3 isoform 1 [Macaca mulatta]
 gi|384948332|gb|AFI37771.1| homeobox protein Meis3 isoform 1 [Macaca mulatta]
          Length = 375

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 256 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 315

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 316 ARRRIVQP 323


>gi|357133433|ref|XP_003568329.1| PREDICTED: LOW QUALITY PROTEIN: BEL1-like homeodomain protein
           9-like [Brachypodium distachyon]
          Length = 585

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT++DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 351 LPERAVSVLRAWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 410

Query: 151 H 151
           H
Sbjct: 411 H 411


>gi|255538764|ref|XP_002510447.1| bel1 homeotic protein, putative [Ricinus communis]
 gi|223551148|gb|EEF52634.1| bel1 homeotic protein, putative [Ricinus communis]
          Length = 469

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP +++KL LA  TGL + Q++NWFIN R R WKP
Sbjct: 377 LPETSVTILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKP 431


>gi|147773525|emb|CAN62866.1| hypothetical protein VITISV_015924 [Vitis vinifera]
          Length = 691

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 418 LPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 472


>gi|402906091|ref|XP_003915840.1| PREDICTED: homeobox protein Meis3, partial [Papio anubis]
          Length = 371

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 252 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 311

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 312 ARRRIVQP 319


>gi|392591918|gb|EIW81245.1| hypothetical protein CONPUDRAFT_153794 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 602

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/60 (46%), Positives = 38/60 (63%)

Query: 87  KKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           +K+GKLPKE+   L  W + H   PYP+E +K QL  +TGL   Q++NW IN R+R   P
Sbjct: 344 RKRGKLPKETTDYLKAWLHRHSDHPYPSEEEKKQLCHATGLSMSQVSNWMINARRRILAP 403


>gi|410932630|ref|XP_003979696.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein PKNOX1-like,
           partial [Takifugu rubripes]
          Length = 424

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 36/63 (57%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           S K K+G LP  +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R 
Sbjct: 259 STKNKRGVLPSXATNVMRSWLFQHIGHPYPTEDEKKQIATQTNLTLLQVNNWFINARRRI 318

Query: 144 WKP 146
            +P
Sbjct: 319 LQP 321


>gi|242033375|ref|XP_002464082.1| hypothetical protein SORBIDRAFT_01g011970 [Sorghum bicolor]
 gi|241917936|gb|EER91080.1| hypothetical protein SORBIDRAFT_01g011970 [Sorghum bicolor]
          Length = 354

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP  S   L  W   H+  PYP + +KL+LA +TGL ++QI+NWFIN R R WKP
Sbjct: 272 LPDGSVAVLRAWLFDHFLHPYPDDGEKLRLAVTTGLSRRQISNWFINARVRLWKP 326


>gi|291413338|ref|XP_002722932.1| PREDICTED: Meis1, myeloid ecotropic viral integration site 1
           homolog 3 [Oryctolagus cuniculus]
          Length = 472

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 354 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 413

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 414 ARRRIVQP 421


>gi|242059233|ref|XP_002458762.1| hypothetical protein SORBIDRAFT_03g039840 [Sorghum bicolor]
 gi|241930737|gb|EES03882.1| hypothetical protein SORBIDRAFT_03g039840 [Sorghum bicolor]
          Length = 593

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 355 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 414

Query: 151 H 151
           H
Sbjct: 415 H 415


>gi|222624113|gb|EEE58245.1| hypothetical protein OsJ_09231 [Oryza sativa Japonica Group]
          Length = 1241

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
           D+ +R   S  G   ++    + +  LP  +   L  W   H+  PYP++ DK  LA  T
Sbjct: 396 DQCIRHHKSLQGVAAMDSHPWRPQRGLPDRAVTILRAWLFEHFLHPYPSDVDKHILARQT 455

Query: 126 GLDQKQINNWFINQRKRHWKPS-ENMHFAVM 155
           GL + Q++NWFIN R R WKP  E M+   M
Sbjct: 456 GLSRSQVSNWFINARVRLWKPMVEEMYVEEM 486


>gi|390602939|gb|EIN12331.1| hypothetical protein PUNSTDRAFT_141073 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 577

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 87  KKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           +K+GKLPK     L DW + H   PYP+E +K QL  +TGL   Q++NW IN R+R
Sbjct: 330 RKRGKLPKPVTDYLKDWLHRHSDHPYPSEEEKKQLCHATGLSMSQVSNWMINARRR 385


>gi|290350474|dbj|BAI78207.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 610

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|322803218|gb|EFZ23239.1| hypothetical protein SINV_08451 [Solenopsis invicta]
          Length = 480

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%)

Query: 57  ARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEA 116
           + DE+    +      G+H  +       ++K+G LPK++   +  W   H   PYPTE 
Sbjct: 322 SEDEEESASNAASNHSGNHRSNHGSARKGRQKRGVLPKQATSIMRTWLFQHLVHPYPTED 381

Query: 117 DKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           +K Q+A  T L   Q+NNWFIN R+R  +P
Sbjct: 382 EKRQIASQTNLTLLQVNNWFINARRRILQP 411


>gi|290350494|dbj|BAI78217.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|290350518|dbj|BAI78229.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 614

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 379 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 438

Query: 151 H 151
           H
Sbjct: 439 H 439


>gi|414871946|tpg|DAA50503.1| TPA: knotted interacting protein1 [Zea mays]
          Length = 263

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP  S   L  W   H+  PYP + +KL+LA +TGL ++QI+NWFIN R R WKP
Sbjct: 178 LPDGSVAVLRAWLFDHFLHPYPNDGEKLRLAVTTGLSRRQISNWFINARVRLWKP 232


>gi|187940734|gb|ACD39468.1| BEL5 protein [Solanum etuberosum]
          Length = 698

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP  E M
Sbjct: 408 LPERAVSVLRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMVEEM 467

Query: 151 HFAVMDN 157
           +   + N
Sbjct: 468 YLEEVKN 474


>gi|162463376|ref|NP_001105184.1| knotted interacting protein1 [Zea mays]
 gi|19743685|gb|AAL92498.1| knotted1-interacting protein [Zea mays]
          Length = 359

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP  S   L  W   H+  PYP + +KL+LA +TGL ++QI+NWFIN R R WKP
Sbjct: 274 LPDGSVAVLRAWLFDHFLHPYPNDGEKLRLAVTTGLSRRQISNWFINARVRLWKP 328


>gi|22652127|gb|AAN03627.1|AF406703_1 BEL1-related homeotic protein 30 [Solanum tuberosum]
          Length = 645

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 398 LPESSVSVLRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 452


>gi|187940726|gb|ACD39464.1| BEL5 protein [Solanum palustre]
          Length = 698

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP  E M
Sbjct: 408 LPERAVSVLRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMVEEM 467

Query: 151 HFAVMDN 157
           +   + N
Sbjct: 468 YLEEVKN 474


>gi|159492482|gb|ABW97427.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 608

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 373 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 432

Query: 151 H 151
           H
Sbjct: 433 H 433


>gi|159492478|gb|ABW97425.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 614

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 379 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 438

Query: 151 H 151
           H
Sbjct: 439 H 439


>gi|350538443|ref|NP_001234599.1| bell-like homeodomain protein 2 [Solanum lycopersicum]
 gi|31323447|gb|AAP47025.1|AF375966_1 bell-like homeodomain protein 2 [Solanum lycopersicum]
          Length = 699

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP  E M
Sbjct: 411 LPERAVSVLRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMVEEM 470

Query: 151 HFAVMDN 157
           +   + N
Sbjct: 471 YLEEVKN 477


>gi|387540126|gb|AFJ70690.1| homeobox protein Meis3 isoform 2 [Macaca mulatta]
          Length = 358

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 239 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 298

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 299 ARRRIVQP 306


>gi|290350482|dbj|BAI78211.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350498|dbj|BAI78219.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350502|dbj|BAI78221.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350504|dbj|BAI78222.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350506|dbj|BAI78223.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|290350468|dbj|BAI78204.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350470|dbj|BAI78205.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350496|dbj|BAI78218.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|159492488|gb|ABW97430.1| putative transcription factor qSH-1 [Oryza nivara]
          Length = 612

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|159492486|gb|ABW97429.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|159492484|gb|ABW97428.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350520|dbj|BAI78230.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350522|dbj|BAI78231.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 614

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 379 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 438

Query: 151 H 151
           H
Sbjct: 439 H 439


>gi|125528380|gb|EAY76494.1| hypothetical protein OsI_04434 [Oryza sativa Indica Group]
 gi|159492448|gb|ABW97410.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492452|gb|ABW97412.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492460|gb|ABW97416.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492490|gb|ABW97431.1| putative transcription factor qSH-1 [Oryza nivara]
 gi|290350434|dbj|BAI78187.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350448|dbj|BAI78194.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350450|dbj|BAI78195.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350454|dbj|BAI78197.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350456|dbj|BAI78198.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350514|dbj|BAI78227.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|19352101|dbj|BAB85942.1| qSH-1 [Oryza sativa Indica Group]
 gi|19352105|dbj|BAB85944.1| qSH-1 [Oryza sativa Indica Group]
 gi|290350444|dbj|BAI78192.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
          Length = 612

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|115441049|ref|NP_001044804.1| Os01g0848400 [Oryza sativa Japonica Group]
 gi|15408891|dbj|BAB64282.1| qSH-1 [Oryza sativa Japonica Group]
 gi|19352103|dbj|BAB85943.1| qSH-1 [Oryza sativa Japonica Group]
 gi|19352107|dbj|BAB85945.1| qSH-1 [Oryza sativa Japonica Group]
 gi|113534335|dbj|BAF06718.1| Os01g0848400 [Oryza sativa Japonica Group]
 gi|125572633|gb|EAZ14148.1| hypothetical protein OsJ_04077 [Oryza sativa Japonica Group]
 gi|159492450|gb|ABW97411.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492454|gb|ABW97413.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492456|gb|ABW97414.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|159492458|gb|ABW97415.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492462|gb|ABW97417.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492464|gb|ABW97418.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492466|gb|ABW97419.1| putative transcription factor qSH-1 [Oryza sativa]
 gi|159492468|gb|ABW97420.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492470|gb|ABW97421.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492472|gb|ABW97422.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492474|gb|ABW97423.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492476|gb|ABW97424.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|159492480|gb|ABW97426.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|159492495|gb|ABW97433.1| putative transcription factor qSH-1 [Oryza nivara]
 gi|159492497|gb|ABW97434.1| putative transcription factor qSH-1 [Oryza nivara x Oryza
           rufipogon]
 gi|290350396|dbj|BAI78168.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350398|dbj|BAI78169.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350400|dbj|BAI78170.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350402|dbj|BAI78171.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350404|dbj|BAI78172.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350406|dbj|BAI78173.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350408|dbj|BAI78174.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350410|dbj|BAI78175.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350412|dbj|BAI78176.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350414|dbj|BAI78177.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350416|dbj|BAI78178.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350418|dbj|BAI78179.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350420|dbj|BAI78180.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350422|dbj|BAI78181.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350424|dbj|BAI78182.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350426|dbj|BAI78183.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350428|dbj|BAI78184.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350430|dbj|BAI78185.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350432|dbj|BAI78186.1| putative transcription factor qSH-1 [Oryza sativa Japonica Group]
 gi|290350436|dbj|BAI78188.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350438|dbj|BAI78189.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350440|dbj|BAI78190.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350442|dbj|BAI78191.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350446|dbj|BAI78193.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350452|dbj|BAI78196.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350458|dbj|BAI78199.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350460|dbj|BAI78200.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350462|dbj|BAI78201.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350464|dbj|BAI78202.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350466|dbj|BAI78203.1| putative transcription factor qSH-1 [Oryza sativa Indica Group]
 gi|290350476|dbj|BAI78208.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350478|dbj|BAI78209.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350480|dbj|BAI78210.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350486|dbj|BAI78213.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350488|dbj|BAI78214.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350492|dbj|BAI78216.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350510|dbj|BAI78225.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350512|dbj|BAI78226.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350516|dbj|BAI78228.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350524|dbj|BAI78232.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350526|dbj|BAI78233.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|290350484|dbj|BAI78212.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|159492493|gb|ABW97432.1| putative transcription factor qSH-1 [Oryza nivara]
 gi|290350472|dbj|BAI78206.1| putative transcription factor qSH-1 [Oryza rufipogon]
 gi|290350490|dbj|BAI78215.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|325181215|emb|CCA15629.1| conserved hypothetical protein [Albugo laibachii Nc14]
 gi|325181856|emb|CCA16311.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 590

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 9/85 (10%)

Query: 86  KKKKGKLPKESRQTLLDWWNA--HYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           KK + +LP ++   L  W  +  H K PYPT+ADK  L + TGL+ KQ+ NWF N RKR 
Sbjct: 156 KKARRELPPQTVALLKGWMLSPEHIKHPYPTDADKQILLKQTGLNMKQLTNWFTNARKRI 215

Query: 144 WKP------SENMH-FAVMDNLSGP 161
           WKP      +++MH  A  D   GP
Sbjct: 216 WKPMMRQQQTKSMHDLAQFDTPFGP 240


>gi|240256213|ref|NP_195405.4| BEL1-like homeodomain protein 2 [Arabidopsis thaliana]
 gi|240256215|ref|NP_001031797.4| BEL1-like homeodomain protein 2 [Arabidopsis thaliana]
 gi|357529561|sp|Q9SW80.3|BLH2_ARATH RecName: Full=BEL1-like homeodomain protein 2; Short=BEL1-like
           protein 2; AltName: Full=Protein SAWTOOTH 1
 gi|332661311|gb|AEE86711.1| BEL1-like homeodomain protein 2 [Arabidopsis thaliana]
 gi|332661312|gb|AEE86712.1| BEL1-like homeodomain protein 2 [Arabidopsis thaliana]
          Length = 739

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 505 LPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 559


>gi|14161625|gb|AAK54829.1|AF376049_1 transcription factor Meis4.1a [Danio rerio]
          Length = 380

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%)

Query: 82  EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           E    KK+G  PK +   ++ W   H   PYP+E  K QL++ TGL   Q+NNWFIN R+
Sbjct: 258 ERKNNKKRGIFPKVASTIMIPWVFQHLTHPYPSEEQKRQLSQDTGLTILQVNNWFINARR 317

Query: 142 RHWKP 146
           R  +P
Sbjct: 318 RIVQP 322


>gi|432090586|gb|ELK24002.1| Homeobox protein Meis3 [Myotis davidii]
          Length = 318

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 227 LDPERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 286

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 287 ARRRIVQP 294


>gi|410054157|ref|XP_001152907.3| PREDICTED: homeobox protein Meis3 [Pan troglodytes]
          Length = 389

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 270 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 329

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 330 ARRRIVQP 337


>gi|5764630|gb|AAD51349.1| bel1-like homeodomain 2 [Arabidopsis thaliana]
 gi|15215857|gb|AAK91472.1| AT4g36870/C7A10_490 [Arabidopsis thaliana]
          Length = 739

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 505 LPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 559


>gi|22652115|gb|AAN03621.1|AF406697_1 BEL1-related homeotic protein 5 [Solanum tuberosum]
          Length = 688

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP  E M
Sbjct: 399 LPERAVSVLRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKPMVEEM 458

Query: 151 HFAVMDN 157
           +   + N
Sbjct: 459 YLEEVKN 465


>gi|443712494|gb|ELU05786.1| hypothetical protein CAPTEDRAFT_221385, partial [Capitella teleta]
          Length = 444

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 38/61 (62%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK++ Q +  W   H   PYP+E +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 266 KNKRGVLPKQATQVMKKWLFQHIMHPYPSEDEKRQIAGQTNLTLLQVNNWFINARRRILQ 325

Query: 146 P 146
           P
Sbjct: 326 P 326


>gi|326493482|dbj|BAJ85202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 477

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 3/86 (3%)

Query: 64  LKDKLLRK---FGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           + D+ LR+   F  + G+  +E    + +  LP+ +   L  W   H+  PYP + DK  
Sbjct: 251 VVDQCLRRQRAFQQYGGAAAIESCPWRPQRGLPERAVAVLRSWLFEHFLHPYPNDVDKHI 310

Query: 121 LAESTGLDQKQINNWFINQRKRHWKP 146
           LA  +GL + Q++NWFIN R R WKP
Sbjct: 311 LARQSGLSRSQVSNWFINARVRLWKP 336


>gi|326511539|dbj|BAJ91914.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 477

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 3/86 (3%)

Query: 64  LKDKLLRK---FGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQ 120
           + D+ LR+   F  + G+  +E    + +  LP+ +   L  W   H+  PYP + DK  
Sbjct: 251 VVDQCLRRQRAFQQYGGAAAIESCPWRPQRGLPERAVAVLRSWLFEHFLHPYPNDVDKHI 310

Query: 121 LAESTGLDQKQINNWFINQRKRHWKP 146
           LA  +GL + Q++NWFIN R R WKP
Sbjct: 311 LARQSGLSRSQVSNWFINARVRLWKP 336


>gi|186503437|ref|NP_180290.2| BEL1-like homeodomain 5 [Arabidopsis thaliana]
 gi|334302770|sp|Q8S897.2|BLH5_ARATH RecName: Full=BEL1-like homeodomain protein 5; Short=BEL1-like
           protein 5
 gi|25407870|pir||C84670 probable homeodomain transcription factor [imported] - Arabidopsis
           thaliana
 gi|67633542|gb|AAY78695.1| homeodomain-containing protein [Arabidopsis thaliana]
 gi|225898142|dbj|BAH30403.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252861|gb|AEC07955.1| BEL1-like homeodomain 5 [Arabidopsis thaliana]
          Length = 431

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+++   L  W   H+  PYP + DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 235 LPEKAVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVRMWKP 289


>gi|297826029|ref|XP_002880897.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297326736|gb|EFH57156.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 434

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP-SENM 150
           LP+++   L  W   H+  PYP + DK+ LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 235 LPEKAVSVLRAWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVRMWKPLVEEL 294

Query: 151 HFAVMD 156
           +   MD
Sbjct: 295 YLEEMD 300


>gi|312281641|dbj|BAJ33686.1| unnamed protein product [Thellungiella halophila]
          Length = 554

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 44  EYSGAETEAQDAEARDEDRHLKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDW 103
           E  G   + Q  E     R+L  +L ++   H     +  + + ++G LP+ S   L  W
Sbjct: 325 EKGGESLDEQQGERIPRLRYLDQRLRQQRALHQQLGMVRPAWRPQRG-LPENSVSALRAW 383

Query: 104 WNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
              H+  PYP E++K+ LA+ TGL + Q+ NWFIN R R WKP
Sbjct: 384 LFEHFLHPYPKESEKVMLAKQTGLSKNQVANWFINARVRLWKP 426


>gi|60476412|gb|AAX21345.1| homeobox knotted-1-like protein KNOX1 [Lotus japonicus]
          Length = 181

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 15/110 (13%)

Query: 8   FAAWLSFFFEFIINPSE-GCTGLKFSNTKDGAASSDEE---YSGAETEAQDAEARDEDRH 63
           F   + F F+ +   S+ GC       T+    SSDE+   Y+  + +A       EDR 
Sbjct: 77  FLQRIEFQFKNLTASSDVGCN----EGTERNTGSSDEDADLYNMIDPQA-------EDRE 125

Query: 64  LKDKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYP 113
           LK +LLRK+  ++GS K EF KK+KKGKLPKE+RQ  L+WW+ HYKWPYP
Sbjct: 126 LKGQLLRKYSGYLGSSKQEFMKKRKKGKLPKEARQQFLEWWSRHYKWPYP 175


>gi|356502201|ref|XP_003519909.1| PREDICTED: BEL1-like homeodomain protein 2-like [Glycine max]
          Length = 739

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 520 LPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 574


>gi|350585341|ref|XP_003127308.3| PREDICTED: homeobox protein Meis3 [Sus scrofa]
          Length = 441

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 242 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 301

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 302 ARRRIVQP 309


>gi|170089179|ref|XP_001875812.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649072|gb|EDR13314.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 585

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 40/62 (64%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           ++K+GKLPKE+   L  W + H   PYP+E +K QL  +TGL   Q++NW IN R+R   
Sbjct: 352 QRKRGKLPKETTDYLKAWLHRHSDHPYPSEDEKKQLCHATGLSMSQVSNWMINARRRILA 411

Query: 146 PS 147
           P+
Sbjct: 412 PA 413


>gi|449460662|ref|XP_004148064.1| PREDICTED: uncharacterized protein LOC101212977 [Cucumis sativus]
          Length = 644

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 442 LPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 496


>gi|2738464|gb|AAB94487.1| homeobox protein [Oryza sativa Indica Group]
          Length = 37

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/37 (75%), Positives = 30/37 (81%)

Query: 105 NAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           + HYKWPYPTE DK +L E TGL  KQINNWFINQRK
Sbjct: 1   DQHYKWPYPTEDDKAKLVEETGLQLKQINNWFINQRK 37


>gi|356518014|ref|XP_003527679.1| PREDICTED: BEL1-like homeodomain protein 11-like [Glycine max]
          Length = 447

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP +++KL LA  TGL + Q++NWFIN R R WKP
Sbjct: 357 LPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKP 411


>gi|290350508|dbj|BAI78224.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|290350500|dbj|BAI78220.1| putative transcription factor qSH-1 [Oryza rufipogon]
          Length = 612

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKPS-ENM 150
           LP+ +   L  W   H+  PYPT+ DK  LA+ TGL + Q++NWFIN R R WKP  E +
Sbjct: 377 LPERAVSVLRAWLFEHFLHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVRLWKPMVEEI 436

Query: 151 H 151
           H
Sbjct: 437 H 437


>gi|449019004|dbj|BAM82406.1| similar to BEL1-related homeotic protein [Cyanidioschyzon merolae
           strain 10D]
          Length = 320

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 39/61 (63%)

Query: 84  SKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRH 143
           +  +++  LPK +      W  AH+  PYP++A K+QL+  TG+  KQ++NWFIN RKR 
Sbjct: 256 ASSRRRTPLPKHAVAVFEAWARAHWDHPYPSDAVKVQLSAQTGVSVKQVSNWFINFRKRS 315

Query: 144 W 144
           W
Sbjct: 316 W 316


>gi|348524701|ref|XP_003449861.1| PREDICTED: homeobox protein PKNOX2 [Oreochromis niloticus]
          Length = 484

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 289 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTSLTLLQVNNWFINARRRILQ 348

Query: 146 P 146
           P
Sbjct: 349 P 349


>gi|356509666|ref|XP_003523567.1| PREDICTED: BEL1-like homeodomain protein 11-like [Glycine max]
          Length = 440

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP +++KL LA  TGL + Q++NWFIN R R WKP
Sbjct: 350 LPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKP 404


>gi|336369777|gb|EGN98118.1| hypothetical protein SERLA73DRAFT_169172 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336382549|gb|EGO23699.1| hypothetical protein SERLADRAFT_450026 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 629

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/61 (45%), Positives = 39/61 (63%)

Query: 87  KKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           +K+GKLPKE+   L  W + H   PYP+E +K QL  +TGL   Q++NW IN R+R   P
Sbjct: 356 RKRGKLPKETTDYLKAWLHRHSDHPYPSEEEKKQLCHATGLSMSQVSNWMINARRRILAP 415

Query: 147 S 147
           +
Sbjct: 416 A 416


>gi|358335670|dbj|GAA54316.1| homeobox protein meis3 [Clonorchis sinensis]
          Length = 1202

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 37/62 (59%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++KK+G  PK +   +  W   H   PYP+E  K QLA  TGL   Q+NNWFIN R+R  
Sbjct: 789 RQKKRGIFPKAATNIMRAWLFQHLSHPYPSEEQKKQLAADTGLTILQVNNWFINARRRIV 848

Query: 145 KP 146
           +P
Sbjct: 849 QP 850


>gi|110761702|ref|XP_001120618.1| PREDICTED: homeobox protein PKNOX2-like [Apis mellifera]
          Length = 441

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 38/61 (62%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           ++K+G LPK++   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 311 RQKRGVLPKQATSIMRTWLFEHLVHPYPTEDEKRQIASQTNLTLLQVNNWFINARRRILQ 370

Query: 146 P 146
           P
Sbjct: 371 P 371


>gi|297746284|emb|CBI16340.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)

Query: 73  GSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQI 132
           G+++G L+ +    + +  LP+ +   L  W   H+  PYPT+ DK  LA  TGL + Q+
Sbjct: 615 GANLGFLEPQQHVWRPQRGLPERAVAILRAWLFEHFLHPYPTDTDKHMLATQTGLSRNQV 674

Query: 133 NNWFINQRKRHWKP-SENMHF 152
           +NWFIN R R WKP  E +H 
Sbjct: 675 SNWFINARVRVWKPMVEEVHM 695


>gi|348537162|ref|XP_003456064.1| PREDICTED: homeobox protein Meis2-like isoform 2 [Oreochromis
           niloticus]
          Length = 392

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  
Sbjct: 267 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 326

Query: 145 KP 146
           +P
Sbjct: 327 QP 328


>gi|296235917|ref|XP_002763104.1| PREDICTED: homeobox protein TGIF2LX-like [Callithrix jacchus]
          Length = 241

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 68  LLRKFGSHIG-SLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTG 126
           ++ +  + IG  L L   + K KG LP ES + L DW   H    YP+EA+KL L+E T 
Sbjct: 32  IMSRNNADIGKPLALPRRRSKPKGNLPAESVKILRDWMYKHRFRAYPSEAEKLMLSEKTN 91

Query: 127 LDQKQINNWFINQRKR 142
           L   Q++NWFIN R+R
Sbjct: 92  LSFSQVSNWFINARRR 107


>gi|410914614|ref|XP_003970782.1| PREDICTED: homeobox protein PKNOX2-like [Takifugu rubripes]
          Length = 478

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 289 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 348

Query: 146 P 146
           P
Sbjct: 349 P 349


>gi|391329286|ref|XP_003739106.1| PREDICTED: homeobox protein Meis1-like [Metaseiulus occidentalis]
          Length = 417

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  
Sbjct: 271 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRIV 330

Query: 145 KP 146
           +P
Sbjct: 331 QP 332


>gi|11877245|emb|CAC19011.1| meis2.1 protein [Danio rerio]
 gi|42542926|gb|AAH66375.1| Myeloid ecotropic viral integration site 2.1 [Danio rerio]
          Length = 393

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  
Sbjct: 275 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 334

Query: 145 KP 146
           +P
Sbjct: 335 QP 336


>gi|356517887|ref|XP_003527617.1| PREDICTED: BEL1-like homeodomain protein 6-like [Glycine max]
          Length = 645

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 408 LPESSVVILRAWLFEHFLHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVRLWKP 462


>gi|449439964|ref|XP_004137755.1| PREDICTED: BEL1-like homeodomain protein 9-like [Cucumis sativus]
          Length = 480

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 1/61 (1%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           + ++G LP+ +   L  W   H+  PYP++ DKL LA+ TGL + Q++NWFIN R R WK
Sbjct: 259 RPQRG-LPERAVTVLRAWLFEHFLHPYPSDTDKLMLAKQTGLSRSQVSNWFINARVRLWK 317

Query: 146 P 146
           P
Sbjct: 318 P 318


>gi|397625267|gb|EJK67724.1| hypothetical protein THAOC_11206, partial [Thalassiosira oceanica]
          Length = 660

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 2/64 (3%)

Query: 85  KKKKKGKLPKESRQTLLDWWNA--HYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           + K K  L + + Q L +W  +  H + PYPTE +K+++ E TGL+ KQ+ NWF+N RKR
Sbjct: 150 QPKAKTALGQYAVQYLKNWMLSPEHIEHPYPTEDEKIEIMEDTGLELKQLTNWFVNNRKR 209

Query: 143 HWKP 146
           +W+P
Sbjct: 210 YWRP 213


>gi|380022802|ref|XP_003695225.1| PREDICTED: homeobox protein unc-62-like [Apis florea]
          Length = 485

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 38/61 (62%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           ++K+G LPK++   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 355 RQKRGVLPKQATSIMRTWLFEHLVHPYPTEDEKRQIASQTNLTLLQVNNWFINARRRILQ 414

Query: 146 P 146
           P
Sbjct: 415 P 415


>gi|403299446|ref|XP_003940497.1| PREDICTED: homeobox protein Meis3 [Saimiri boliviensis boliviensis]
          Length = 288

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 169 LDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 228

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 229 ARRRIVQP 236


>gi|205815339|sp|A6NDR6.2|ME3L1_HUMAN RecName: Full=Putative homeobox protein Meis3-like 1
          Length = 274

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 39/68 (57%)

Query: 79  LKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFIN 138
           L  E  + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN
Sbjct: 155 LDQEPRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFIN 214

Query: 139 QRKRHWKP 146
            R+R  +P
Sbjct: 215 ARRRIVQP 222


>gi|242035251|ref|XP_002465020.1| hypothetical protein SORBIDRAFT_01g030620 [Sorghum bicolor]
 gi|241918874|gb|EER92018.1| hypothetical protein SORBIDRAFT_01g030620 [Sorghum bicolor]
          Length = 634

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
           D+ LR+  ++   + LE    + +  LP+ +   L  W   H+  PYP++ DK  LA  T
Sbjct: 326 DQCLRQHRAYQAGV-LESQPWRPQRGLPERAVSILRAWLFEHFLHPYPSDVDKHILARQT 384

Query: 126 GLDQKQINNWFINQRKRHWKP 146
           GL + Q++NWFIN R R WKP
Sbjct: 385 GLSRSQVSNWFINARVRLWKP 405


>gi|345489857|ref|XP_001601467.2| PREDICTED: homeobox protein homothorax-like [Nasonia vitripennis]
          Length = 482

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 37/61 (60%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           +KK+G  PK +   L  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  +
Sbjct: 359 QKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRIVQ 418

Query: 146 P 146
           P
Sbjct: 419 P 419


>gi|194699702|gb|ACF83935.1| unknown [Zea mays]
          Length = 308

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ +   L  W   H+  PYPT++DK  LA+ TGL + Q++NWFIN R R WKP
Sbjct: 58  LPERAVSVLRSWLFEHFLHPYPTDSDKQMLAKQTGLTRNQVSNWFINARVRLWKP 112


>gi|414864987|tpg|DAA43544.1| TPA: putative POX domain/homeobox DNA-binding domain family protein
           [Zea mays]
          Length = 343

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ +   L  W   H+  PYP +++KL LA  TGL + Q++NWFIN R R WKP
Sbjct: 97  LPESAVSVLRAWLFEHFLHPYPKDSEKLMLARQTGLSRGQVSNWFINARVRLWKP 151


>gi|348537160|ref|XP_003456063.1| PREDICTED: homeobox protein Meis2-like isoform 1 [Oreochromis
           niloticus]
          Length = 385

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  
Sbjct: 267 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 326

Query: 145 KP 146
           +P
Sbjct: 327 QP 328


>gi|22652123|gb|AAN03625.1|AF406701_1 BEL1-related homeotic protein 22, partial [Solanum tuberosum]
          Length = 620

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/55 (50%), Positives = 34/55 (61%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q+ NWFIN R R WKP
Sbjct: 413 LPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVANWFINARVRLWKP 467


>gi|297802264|ref|XP_002869016.1| hypothetical protein ARALYDRAFT_328081 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314852|gb|EFH45275.1| hypothetical protein ARALYDRAFT_328081 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 726

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 495 LPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 549


>gi|383852690|ref|XP_003701858.1| PREDICTED: homeobox protein homothorax-like [Megachile rotundata]
          Length = 504

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/61 (47%), Positives = 37/61 (60%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           +KK+G  PK +   L  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  +
Sbjct: 381 QKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRIVQ 440

Query: 146 P 146
           P
Sbjct: 441 P 441


>gi|334184503|ref|NP_001189615.1| BEL1-like homeodomain 5 [Arabidopsis thaliana]
 gi|330252862|gb|AEC07956.1| BEL1-like homeodomain 5 [Arabidopsis thaliana]
          Length = 439

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+++   L  W   H+  PYP + DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 243 LPEKAVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVRMWKP 297


>gi|356544650|ref|XP_003540761.1| PREDICTED: uncharacterized protein LOC100793050 [Glycine max]
          Length = 760

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP-SENM 150
           LP+ S   L  W   H+  PYPT+ DK  LA  TGL + Q++NWFIN R R WKP  E +
Sbjct: 540 LPERSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEI 599

Query: 151 HF 152
           H 
Sbjct: 600 HM 601


>gi|399571759|gb|AFP48375.1| meis [Schmidtea mediterranea]
          Length = 577

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  
Sbjct: 46  RQKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 105

Query: 145 KP 146
           +P
Sbjct: 106 QP 107


>gi|222613182|gb|EEE51314.1| hypothetical protein OsJ_32275 [Oryza sativa Japonica Group]
          Length = 592

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 2/96 (2%)

Query: 66  DKLLRKFGSHIGSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAEST 125
           D+ LR+  ++   + LE    + +  LP+ +   L  W   H+  PYP++ DK  LA  T
Sbjct: 312 DQCLRQHKAYQAGM-LESHPWRPQRGLPERAVSILRAWLFEHFLHPYPSDVDKHILARQT 370

Query: 126 GLDQKQINNWFINQRKRHWKPS-ENMHFAVMDNLSG 160
           GL + Q+ NWFIN R R WKP  E M+   M +  G
Sbjct: 371 GLSRSQVANWFINARVRLWKPMVEEMYAEEMKDEEG 406


>gi|432945579|ref|XP_004083668.1| PREDICTED: homeobox protein Meis2-like [Oryzias latipes]
          Length = 249

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  
Sbjct: 131 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 190

Query: 145 KP 146
           +P
Sbjct: 191 QP 192


>gi|110339159|gb|ABG67843.1| PREP/MEIS-like, partial [Nematostella vectensis]
          Length = 60

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 36/55 (65%)

Query: 88  KKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKR 142
           ++GKLP+ +R  L+ W  AH   PYPTE +K  LA  TGL   QINNWF N R+R
Sbjct: 1   RRGKLPESARTRLMTWLFAHSNRPYPTEEEKSNLATITGLTPIQINNWFSNARRR 55


>gi|449483679|ref|XP_004156658.1| PREDICTED: BEL1-like homeodomain protein 9-like [Cucumis sativus]
          Length = 288

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ +   L  W   H+  PYP++ DKL LA+ TGL + Q++NWFIN R R WKP
Sbjct: 72  LPERAVTVLRAWLFEHFLHPYPSDTDKLMLAKQTGLSRSQVSNWFINARVRLWKP 126


>gi|328697574|ref|XP_001951115.2| PREDICTED: homeobox protein homothorax-like [Acyrthosiphon pisum]
          Length = 584

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           +KK+G  PK +   L  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  +
Sbjct: 458 QKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRIVQ 517

Query: 146 PS-ENMHFAVMDNLSGP 161
           P  +  + AV    +GP
Sbjct: 518 PMIDQSNRAVFSPHAGP 534


>gi|358339422|dbj|GAA47489.1| homeobox protein Meis3 [Clonorchis sinensis]
          Length = 1206

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 89   KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
            +  LP  +R+ L  W   H + PYP+E +K+ LA  TGL +  +NNWFIN R+R+ KP
Sbjct: 1017 RTNLPFPARKRLFGWLVDHLREPYPSEEEKMMLAMETGLSRTTVNNWFINARRRYVKP 1074


>gi|383858979|ref|XP_003704976.1| PREDICTED: homeobox protein PKNOX2-like [Megachile rotundata]
          Length = 443

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 38/61 (62%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           ++K+G LPK++   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 311 RQKRGVLPKQATSIMRTWLFEHLVHPYPTEDEKRQIASQTNLTLLQVNNWFINARRRILQ 370

Query: 146 P 146
           P
Sbjct: 371 P 371


>gi|358398154|gb|EHK47512.1| hypothetical protein TRIATDRAFT_255946 [Trichoderma atroviride IMI
           206040]
          Length = 178

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 39/62 (62%)

Query: 82  EFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRK 141
           E   +K++G LP+++   L  W++ H   PYPTE +K +    TGL   QI+NWFIN R+
Sbjct: 44  ETRSRKRRGNLPRDTTDKLRAWFDDHLSHPYPTEDEKQEFIRRTGLQMNQISNWFINARR 103

Query: 142 RH 143
           R+
Sbjct: 104 RY 105


>gi|213623826|gb|AAI70273.1| Meis1 protein [Xenopus laevis]
          Length = 465

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 37/62 (59%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           + KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  
Sbjct: 272 RHKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 331

Query: 145 KP 146
           +P
Sbjct: 332 QP 333


>gi|187940732|gb|ACD39467.1| BEL30 protein [Solanum palustre]
          Length = 645

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP ++DK+ LA  TGL + Q++NWFIN R R WKP
Sbjct: 398 LPESSVSVLRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKP 452


>gi|356541372|ref|XP_003539151.1| PREDICTED: BEL1-like homeodomain protein 1-like [Glycine max]
          Length = 764

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ +   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 431 LPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKP 485


>gi|328784947|ref|XP_624460.3| PREDICTED: homeobox protein homothorax-like [Apis mellifera]
          Length = 486

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 37/61 (60%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           +KK+G  PK +   L  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  +
Sbjct: 364 QKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRIVQ 423

Query: 146 P 146
           P
Sbjct: 424 P 424


>gi|38490442|emb|CAD57739.1| homothorax 1 [Cupiennius salei]
          Length = 505

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++KK+G  PK +   +  W   H   PYP+E  K QLA+ TGL   Q+NNWFIN R+R  
Sbjct: 328 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRIV 387

Query: 145 KP 146
           +P
Sbjct: 388 QP 389


>gi|24119266|ref|NP_705940.1| homeobox protein PKNOX2 [Danio rerio]
 gi|23495538|dbj|BAC20216.1| TALE homeodomain transcription factor Prep2 [Danio rerio]
 gi|108742153|gb|AAI17640.1| Pbx/knotted 1 homeobox 2 [Danio rerio]
          Length = 474

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 289 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 348

Query: 146 P 146
           P
Sbjct: 349 P 349


>gi|168049862|ref|XP_001777380.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671229|gb|EDQ57784.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1288

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/55 (47%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ +   L  W   H+  PYP + DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 895 LPERAVSVLRAWLFEHFLHPYPKDVDKMSLAKQTGLTRSQVSNWFINARVRLWKP 949


>gi|410972269|ref|XP_003992583.1| PREDICTED: homeobox protein PKNOX2 isoform 2 [Felis catus]
 gi|410972271|ref|XP_003992584.1| PREDICTED: homeobox protein PKNOX2 isoform 3 [Felis catus]
          Length = 443

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 260 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 319

Query: 146 P 146
           P
Sbjct: 320 P 320


>gi|357150764|ref|XP_003575568.1| PREDICTED: BEL1-like homeodomain protein 6-like [Brachypodium
           distachyon]
          Length = 650

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP +++KL LA  TGL + QI+NWFIN R R WKP
Sbjct: 396 LPENSVTVLRAWLFEHFLHPYPKDSEKLMLARQTGLTRSQISNWFINARVRLWKP 450


>gi|338726468|ref|XP_003365328.1| PREDICTED: homeobox protein PKNOX2 isoform 2 [Equus caballus]
          Length = 443

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 260 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 319

Query: 146 P 146
           P
Sbjct: 320 P 320


>gi|327283249|ref|XP_003226354.1| PREDICTED: homeobox protein PKNOX2-like [Anolis carolinensis]
          Length = 477

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 289 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 348

Query: 146 P 146
           P
Sbjct: 349 P 349


>gi|345799624|ref|XP_536535.3| PREDICTED: homeobox protein PKNOX2 isoform 1 [Canis lupus
           familiaris]
          Length = 443

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 260 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 319

Query: 146 P 146
           P
Sbjct: 320 P 320


>gi|118344240|ref|NP_001071943.1| transcription factor protein [Ciona intestinalis]
 gi|70570191|dbj|BAE06553.1| transcription factor protein [Ciona intestinalis]
          Length = 554

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/81 (38%), Positives = 43/81 (53%)

Query: 85  KKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHW 144
           ++KK+G  PK++   +  W   +   PYPTE  K  LA  TGL   Q+NNWFIN R+R  
Sbjct: 324 QQKKRGIFPKQATNIMRAWLFQNLTHPYPTEEQKKSLANQTGLTILQVNNWFINARRRIV 383

Query: 145 KPSENMHFAVMDNLSGPLFTD 165
           +P  +     + N  GP   D
Sbjct: 384 QPMIDQSNRAVSNAMGPYSPD 404


>gi|402895698|ref|XP_003910956.1| PREDICTED: homeobox protein PKNOX2 [Papio anubis]
          Length = 460

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 277 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 336

Query: 146 P 146
           P
Sbjct: 337 P 337


>gi|397498398|ref|XP_003819971.1| PREDICTED: homeobox protein PKNOX2 isoform 3 [Pan paniscus]
 gi|397498400|ref|XP_003819972.1| PREDICTED: homeobox protein PKNOX2 isoform 4 [Pan paniscus]
          Length = 443

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 260 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 319

Query: 146 P 146
           P
Sbjct: 320 P 320


>gi|356541469|ref|XP_003539198.1| PREDICTED: uncharacterized protein LOC100810379 [Glycine max]
          Length = 727

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP-SENM 150
           LP+ S   L  W   H+  PYPT+ DK  LA  TGL + Q++NWFIN R R WKP  E +
Sbjct: 521 LPERSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEI 580

Query: 151 HF 152
           H 
Sbjct: 581 HM 582


>gi|357483175|ref|XP_003611874.1| BEL1-like homeodomain protein [Medicago truncatula]
 gi|355513209|gb|AES94832.1| BEL1-like homeodomain protein [Medicago truncatula]
          Length = 751

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/55 (50%), Positives = 34/55 (61%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP  S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 531 LPDRSVNVLRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 585


>gi|335309211|ref|XP_003361539.1| PREDICTED: homeobox protein PKNOX2 isoform 2 [Sus scrofa]
          Length = 443

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 260 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 319

Query: 146 P 146
           P
Sbjct: 320 P 320


>gi|426251707|ref|XP_004019563.1| PREDICTED: homeobox protein PKNOX2 isoform 2 [Ovis aries]
          Length = 443

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 260 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 319

Query: 146 P 146
           P
Sbjct: 320 P 320


>gi|357120904|ref|XP_003562164.1| PREDICTED: homeobox protein BEL1 homolog [Brachypodium distachyon]
          Length = 609

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 77  GSLKLEFSKKKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWF 136
           G L +E    + +  LP+ +   L  W   H+  PYP++ DK  L+  TGL + Q++NWF
Sbjct: 312 GGLMMETHPWRPQRGLPERAVTVLRAWLFEHFLHPYPSDVDKHILSRQTGLSRSQVSNWF 371

Query: 137 INQRKRHWKPS-ENMHFAVMDNL 158
           IN R R WKP  E M+   M ++
Sbjct: 372 INARVRLWKPMVEEMYVEEMKDV 394


>gi|187940730|gb|ACD39466.1| BEL29 protein [Solanum palustre]
          Length = 516

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ +   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 186 LPERAVSVLRAWLFEHFLHPYPKDSDKMMLAKQTGLTRSQVSNWFINARVRLWKP 240


>gi|7239157|gb|AAF43095.1|AF053769_1 homeodomain protein [Malus x domestica]
          Length = 809

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 563 LPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 617


>gi|403262431|ref|XP_003923593.1| PREDICTED: homeobox protein PKNOX2 isoform 2 [Saimiri boliviensis
           boliviensis]
          Length = 443

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 260 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 319

Query: 146 P 146
           P
Sbjct: 320 P 320


>gi|255339741|gb|ACU01957.1| aintegumenta-like protein [Santalum album]
          Length = 299

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP++S   L  W   H+  PYP++ DK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 77  LPEQSVSVLRSWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKP 131


>gi|256079151|ref|XP_002575853.1| homeobox protein knotted-1 [Schistosoma mansoni]
 gi|353230922|emb|CCD77339.1| putative homeobox protein knotted-1 [Schistosoma mansoni]
          Length = 1173

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 89  KGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           +  LP  +R+ L  W   H + PYP+E +K+ LA  TGL +  +NNWFIN R+R+ KP
Sbjct: 819 RTNLPFPARKRLFGWLVDHLREPYPSEEEKMMLAMETGLSRTTVNNWFINARRRYVKP 876


>gi|22652125|gb|AAN03626.1|AF406702_1 BEL1-related homeotic protein 29, partial [Solanum tuberosum]
          Length = 567

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 36/55 (65%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ +   L  W   H+  PYP ++DK+ LA+ TGL + Q++NWFIN R R WKP
Sbjct: 243 LPERAVSVLRAWLFEHFLHPYPKDSDKMMLAKQTGLTRSQVSNWFINARVRLWKP 297


>gi|345799628|ref|XP_849311.2| PREDICTED: homeobox protein PKNOX2 isoform 2 [Canis lupus
           familiaris]
          Length = 408

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 225 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 284

Query: 146 P 146
           P
Sbjct: 285 P 285


>gi|188528947|ref|NP_001120899.1| PBX/knotted 1 homeobox 2 [Xenopus (Silurana) tropicalis]
 gi|183985896|gb|AAI66172.1| pknox2 protein [Xenopus (Silurana) tropicalis]
          Length = 468

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 289 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 348

Query: 146 P 146
           P
Sbjct: 349 P 349


>gi|114641034|ref|XP_508845.2| PREDICTED: homeobox protein PKNOX2 isoform 2 [Pan troglodytes]
 gi|332838118|ref|XP_003313447.1| PREDICTED: homeobox protein PKNOX2 isoform 1 [Pan troglodytes]
 gi|221045924|dbj|BAH14639.1| unnamed protein product [Homo sapiens]
          Length = 443

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 260 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 319

Query: 146 P 146
           P
Sbjct: 320 P 320


>gi|395848353|ref|XP_003796815.1| PREDICTED: homeobox protein PKNOX2 isoform 2 [Otolemur garnettii]
 gi|395848355|ref|XP_003796816.1| PREDICTED: homeobox protein PKNOX2 isoform 3 [Otolemur garnettii]
          Length = 443

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 260 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 319

Query: 146 P 146
           P
Sbjct: 320 P 320


>gi|5678605|emb|CAB16801.2| BEL1-like homeobox 2 protein (BLH2) [Arabidopsis thaliana]
 gi|7270636|emb|CAB80353.1| BEL1-like homeobox 2 protein (BLH2) [Arabidopsis thaliana]
          Length = 638

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 35/55 (63%)

Query: 92  LPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWKP 146
           LP+ S   L  W   H+  PYP++ADK  LA  TGL + Q++NWFIN R R WKP
Sbjct: 504 LPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 558


>gi|221042488|dbj|BAH12921.1| unnamed protein product [Homo sapiens]
          Length = 408

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 36/61 (59%)

Query: 86  KKKKGKLPKESRQTLLDWWNAHYKWPYPTEADKLQLAESTGLDQKQINNWFINQRKRHWK 145
           K K+G LPK +   +  W   H   PYPTE +K Q+A  T L   Q+NNWFIN R+R  +
Sbjct: 225 KNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQ 284

Query: 146 P 146
           P
Sbjct: 285 P 285


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.316    0.132    0.416 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,757,832,114
Number of Sequences: 23463169
Number of extensions: 110712454
Number of successful extensions: 375519
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3948
Number of HSP's successfully gapped in prelim test: 772
Number of HSP's that attempted gapping in prelim test: 370764
Number of HSP's gapped (non-prelim): 5332
length of query: 166
length of database: 8,064,228,071
effective HSP length: 127
effective length of query: 39
effective length of database: 9,379,372,904
effective search space: 365795543256
effective search space used: 365795543256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)