Query 045164
Match_columns 334
No_of_seqs 174 out of 1495
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 10:28:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045164.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045164hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 7E-106 1E-110 769.8 25.6 295 26-327 20-324 (324)
2 cd00693 secretory_peroxidase H 100.0 4.9E-99 1E-103 720.4 24.6 293 30-326 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 2.6E-72 5.7E-77 519.5 10.8 228 47-291 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 2.3E-69 5E-74 511.2 20.0 232 44-324 14-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1.8E-66 3.8E-71 486.1 18.4 229 42-312 11-251 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 8.8E-65 1.9E-69 473.2 20.1 230 34-312 4-248 (250)
7 cd00692 ligninase Ligninase an 100.0 2.7E-64 5.8E-69 484.5 20.0 238 43-329 16-289 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 3E-63 6.5E-68 462.3 20.3 220 44-312 17-248 (251)
9 cd00314 plant_peroxidase_like 100.0 2.5E-59 5.4E-64 438.6 16.7 223 46-308 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 2.2E-56 4.7E-61 436.3 18.3 260 44-317 44-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 1.6E-53 3.4E-58 439.7 19.3 258 45-317 55-408 (716)
12 cd08201 plant_peroxidase_like_ 100.0 3.3E-51 7.2E-56 381.4 11.1 232 31-308 14-264 (264)
13 PRK15061 catalase/hydroperoxid 100.0 4.7E-50 1E-54 411.9 19.3 260 44-317 56-414 (726)
14 cd08200 catalase_peroxidase_2 100.0 2.5E-39 5.5E-44 305.1 16.3 219 49-310 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 2.4E-34 5.1E-39 297.6 15.8 220 46-311 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 7.7E-34 1.7E-38 292.4 16.9 220 49-311 442-722 (726)
17 COG0376 KatG Catalase (peroxid 100.0 2.4E-30 5.3E-35 256.0 14.8 253 46-310 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.4 2.1E-12 4.6E-17 129.2 13.0 215 49-310 452-725 (730)
19 PTZ00411 transaldolase-like pr 50.5 82 0.0018 31.2 8.3 77 104-187 149-230 (333)
20 KOG0400 40S ribosomal protein 42.5 31 0.00066 29.7 3.4 34 171-204 31-65 (151)
21 PF11895 DUF3415: Domain of un 42.2 21 0.00046 28.0 2.2 18 294-311 2-19 (80)
22 COG3763 Uncharacterized protei 35.8 71 0.0015 24.5 4.1 28 46-73 24-51 (71)
23 PF07172 GRP: Glycine rich pro 29.3 57 0.0012 26.3 2.9 7 1-7 1-7 (95)
24 PF06387 Calcyon: D1 dopamine 24.1 72 0.0016 28.7 2.8 29 33-71 106-134 (186)
25 PLN00017 photosystem I reactio 21.4 47 0.001 26.4 1.0 20 288-307 38-57 (90)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=6.9e-106 Score=769.81 Aligned_cols=295 Identities=32% Similarity=0.567 Sum_probs=278.9
Q ss_pred ccCCCCCcchhhccCccHHHHHHHHHHHHHHhCCChhhhHHHHHhcccccccCCceeecccCCCCccccccccCCCCchh
Q 045164 26 SGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSFGMRNF 105 (334)
Q Consensus 26 ~~~~~l~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSilld~~~~~~~E~~~~~N~~L~g~ 105 (334)
...++|+++||++|||++|+||++.|++.+.+||+++|++|||+||||||+||||||||+++ ..||++++|.+|+||
T Consensus 20 ~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf 96 (324)
T PLN03030 20 VQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGY 96 (324)
T ss_pred chhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchH
Confidence 34567999999999999999999999999999999999999999999999999999999854 479999999999999
Q ss_pred HHHHHHHHHHhhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCcccccccCCCCCCCCHHHHHHHHHHCCC
Q 045164 106 RYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGI 185 (334)
Q Consensus 106 ~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl 185 (334)
++|+.||+++|++||++|||||||||||||||+++|||.|+|++||||+++|.+.++. +||+|+.++++|++.|+++||
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl 175 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGL 175 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999877764 899999999999999999999
Q ss_pred CcccceeeecccccccccccccccccCC------CCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccChHHH
Q 045164 186 DVEGTVALLGAHSVGRVHCVNLVHRLYP------TVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYY 259 (334)
Q Consensus 186 ~~~elVaLsGaHTiG~~hc~~f~~Rl~~------~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy 259 (334)
+.+|||+||||||||++||.+|.+|||+ .+||+||+.|+..|++.|| ..++..+. +++|+.||.+|||+||
T Consensus 176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp-~~~~~~~~--~~lD~~Tp~~FDn~Yy 252 (324)
T PLN03030 176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCP-QNGDGSRR--IALDTGSSNRFDASFF 252 (324)
T ss_pred CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCC-CCCCCCcc--ccCCCCCCcccccHHH
Confidence 9999999999999999999999999992 3699999999999999999 33333334 7899999999999999
Q ss_pred HHhhcccccchhhhhhccCCCcHHHHHHhhhCh----HHHHHHHHHHHHHhhcCCCCCCCCCcccccccccc
Q 045164 260 KNLLNQKGLLIVDQQLASDPRTAPFVEKMAADN----GYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYAN 327 (334)
Q Consensus 260 ~~l~~~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~n 327 (334)
+||++++|+|+|||+|+.|++|+++|++||.|+ +.|+++|++||+|||+|+||||.+|||||+|+++|
T Consensus 253 ~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 253 SNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 999999999999999999999999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=4.9e-99 Score=720.41 Aligned_cols=293 Identities=43% Similarity=0.740 Sum_probs=280.4
Q ss_pred CCCcchhhccCccHHHHHHHHHHHHHHhCCChhhhHHHHHhcccccccCCceeecccCCCCccccccccCCCCchhHHHH
Q 045164 30 QLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSFGMRNFRYVD 109 (334)
Q Consensus 30 ~l~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSilld~~~~~~~E~~~~~N~~L~g~~~I~ 109 (334)
||+++||++|||++|+||+++|++.+.+|++++|++|||+||||||+||||||||+++.++.+|+++++|.+|+||++|+
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l~g~~~i~ 80 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSLRGFDVID 80 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCcchhHHHH
Confidence 59999999999999999999999999999999999999999999999999999999877778999999999999999999
Q ss_pred HHHHHHhhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCCccc
Q 045164 110 TIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEG 189 (334)
Q Consensus 110 ~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e 189 (334)
.||+++|+.||++||||||||||||+||+++|||.|+|++||+|+.++.+..+ .+||+|+.+++++++.|+++||+++|
T Consensus 81 ~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~d 159 (298)
T cd00693 81 DIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVTD 159 (298)
T ss_pred HHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999999998877665 78999999999999999999999999
Q ss_pred ceeeecccccccccccccccccCC-----CCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccChHHHHHhhc
Q 045164 190 TVALLGAHSVGRVHCVNLVHRLYP-----TVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLN 264 (334)
Q Consensus 190 lVaLsGaHTiG~~hc~~f~~Rl~~-----~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy~~l~~ 264 (334)
||||+||||||++||.+|.+|+|+ .+||+||+.|+..|++.||. .++..++ +++|+.||.+|||+||++|+.
T Consensus 160 ~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~-~~~~~~~--~~lD~~Tp~~FDn~Yy~~l~~ 236 (298)
T cd00693 160 LVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPA-GGDDDTL--VPLDPGTPNTFDNSYYKNLLA 236 (298)
T ss_pred heeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCC-CCCCCcc--ccCCCCCCCccccHHHHHHHh
Confidence 999999999999999999999983 58999999999999999993 3334455 899999999999999999999
Q ss_pred ccccchhhhhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCCCCCCccccccccc
Q 045164 265 QKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYA 326 (334)
Q Consensus 265 ~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~ 326 (334)
++|+|+|||+|+.|++|+++|++||.||+.|+++|++||+||++++|+||.+||||++|+++
T Consensus 237 ~~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 237 GRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred cccCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=2.6e-72 Score=519.54 Aligned_cols=228 Identities=42% Similarity=0.733 Sum_probs=210.4
Q ss_pred HHHHHHHHHHhCCChhhhHHHHHhccccc-ccCCceeecccCCCCccccccccCCCCc-hhHHHHHHHHHHhhhCCCccC
Q 045164 47 IKQQVINLYNKHGNTAVSWVRNLFHDCIV-KSCDASLLLKKAGGIVSEQASERSFGMR-NFRYVDTIKEALEEECPVTVS 124 (334)
Q Consensus 47 Vr~~v~~~~~~d~~~aa~llRL~FHDcfv-~GcDgSilld~~~~~~~E~~~~~N~~L~-g~~~I~~iK~~le~~cp~~VS 124 (334)
||++|++.+.++++++|+||||+|||||+ +|||||||+. ..|+++++|.+|+ ++++|+.||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 89999999999999999999999999999 9999999983 5799999999999 999999999999999999999
Q ss_pred hhhHHHhhhhhhhhhcCCCccccccCCCCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCCcccceeeecccccccccc
Q 045164 125 CADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHC 204 (334)
Q Consensus 125 cADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsGaHTiG~~hc 204 (334)
|||||+||+++||+.+|||.|+|++||+|+.+++..++ .+||+|+.++++|++.|+++|||++|||||+||||||++||
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c 154 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHC 154 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESG
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceeccccccccee
Confidence 99999999999999999999999999999999998777 78999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccChHHHHHhhcccccchhhhhhccCCCcHHH
Q 045164 205 VNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLNQKGLLIVDQQLASDPRTAPF 284 (334)
Q Consensus 205 ~~f~~Rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~t~~~ 284 (334)
.+|. |+|..+||+||+.|+.. .|+ ..+ +. . +++| ||.+|||+||++|++++|+|+||++|+.|++|+++
T Consensus 155 ~~f~-rl~~~~dp~~d~~~~~~---~C~-~~~-~~-~--~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~ 223 (230)
T PF00141_consen 155 SSFS-RLYFPPDPTMDPGYAGQ---NCN-SGG-DN-G--VPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPI 223 (230)
T ss_dssp GCTG-GTSCSSGTTSTHHHHHH---SSS-TSG-CT-C--EESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHH
T ss_pred cccc-cccccccccccccccee---ccC-CCc-cc-c--cccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHH
Confidence 9999 99977899999999988 894 332 22 5 7888 99999999999999999999999999999999999
Q ss_pred HHHhhhC
Q 045164 285 VEKMAAD 291 (334)
Q Consensus 285 V~~yA~d 291 (334)
|++||+|
T Consensus 224 V~~yA~d 230 (230)
T PF00141_consen 224 VERYAQD 230 (230)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 9999986
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=2.3e-69 Score=511.21 Aligned_cols=232 Identities=24% Similarity=0.359 Sum_probs=210.0
Q ss_pred HHHHHHHHHHHHHhCCChhhhHHHHHhcccc-------cccCCceeecccCCCCccccccccCCCCc-hhHHHHHHHHHH
Q 045164 44 EDIIKQQVINLYNKHGNTAVSWVRNLFHDCI-------VKSCDASLLLKKAGGIVSEQASERSFGMR-NFRYVDTIKEAL 115 (334)
Q Consensus 44 e~iVr~~v~~~~~~d~~~aa~llRL~FHDcf-------v~GcDgSilld~~~~~~~E~~~~~N~~L~-g~~~I~~iK~~l 115 (334)
.+.++++|+ .+.+||.++|.+|||+||||| ++||||||++. .|+++++|.+|+ ||++|+.||+++
T Consensus 14 ~~~~~~~~~-~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~ 86 (289)
T PLN02608 14 IEKARRDLR-ALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH 86 (289)
T ss_pred HHHHHHHHH-HHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc
Confidence 346777774 477899999999999999999 89999999984 599999999995 999999999997
Q ss_pred hhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCCcccceeeec
Q 045164 116 EEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLG 195 (334)
Q Consensus 116 e~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsG 195 (334)
++|||||||+||||+||+++|||.|+|++||+|+.+++ ++.+||+|+.+++++++.|+++||+++|||+|+|
T Consensus 87 -----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~---~~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsG 158 (289)
T PLN02608 87 -----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACP---EEGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSG 158 (289)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCC---ccCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhcc
Confidence 48999999999999999999999999999999999985 3468999999999999999999999999999999
Q ss_pred ccccccccccccccccCCCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccChHHHHHhhcc--ccc--chh
Q 045164 196 AHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLNQ--KGL--LIV 271 (334)
Q Consensus 196 aHTiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy~~l~~~--~gl--L~S 271 (334)
|||||++||. |+ +..+++ + .||.+|||+||++++++ +|+ |+|
T Consensus 159 AHTiG~ahc~----r~------------------------g~~g~~-----~-~Tp~~FDN~Yy~~ll~~~~~gll~L~S 204 (289)
T PLN02608 159 GHTLGRAHPE----RS------------------------GFDGPW-----T-KEPLKFDNSYFVELLKGESEGLLKLPT 204 (289)
T ss_pred cccccccccc----CC------------------------CCCCCC-----C-CCCCccChHHHHHHHcCCcCCcccccc
Confidence 9999999994 43 000112 2 68999999999999998 788 799
Q ss_pred hhhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCCCCCCccccccc
Q 045164 272 DQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCR 324 (334)
Q Consensus 272 D~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~ 324 (334)
|++|+.|++|+++|++||.||++|+++|++||+||++|+|+||++||+.+.-+
T Consensus 205 D~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 205 DKALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred CHhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 99999999999999999999999999999999999999999999999988643
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.8e-66 Score=486.09 Aligned_cols=229 Identities=27% Similarity=0.404 Sum_probs=207.1
Q ss_pred cHHHHHHHHHHHHHHhCCChhhhHHHHHhcccccccCCceeecccC---CCCccccccccCCCC-chhHHHHHHHHHHhh
Q 045164 42 KAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKA---GGIVSEQASERSFGM-RNFRYVDTIKEALEE 117 (334)
Q Consensus 42 ~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSilld~~---~~~~~E~~~~~N~~L-~g~~~I~~iK~~le~ 117 (334)
..++||+++|++.+. |++++|++|||+|||||+ ||+|+++++. ..+.+|+++++|.+| +||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 457899999999999 999999999999999994 7777766432 223579999999999 7999999999987
Q ss_pred hCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCCcccceeeeccc
Q 045164 118 ECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAH 197 (334)
Q Consensus 118 ~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsGaH 197 (334)
| +||||||||||||+||+.+|||.|+|++||+|+.++....++.+||.|+.+++++++.|+++||+.+|||+|+|||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGaH 162 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGAH 162 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhcccc
Confidence 4 8999999999999999999999999999999999998777788899999999999999999999999999999999
Q ss_pred ccccccccccccccCCCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccChHHHHHhhcccc--------cc
Q 045164 198 SVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLNQKG--------LL 269 (334)
Q Consensus 198 TiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy~~l~~~~g--------lL 269 (334)
|||++||..+ . + .+ .+ ..||.+|||+||++|+.++| +|
T Consensus 163 TiG~a~c~~~--~-~----------------------~g---~~------~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L 208 (253)
T cd00691 163 TLGRCHKERS--G-Y----------------------DG---PW------TKNPLKFDNSYFKELLEEDWKLPTPGLLML 208 (253)
T ss_pred eeecccccCC--C-C----------------------CC---CC------CCCCCcccHHHHHHHhcCCCccCcCcceec
Confidence 9999999521 0 0 11 11 16899999999999999999 99
Q ss_pred hhhhhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHhhcCCCC
Q 045164 270 IVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPL 312 (334)
Q Consensus 270 ~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~ 312 (334)
+||++|+.|++|+.+|+.||+|+++|+++|++||+||++++|.
T Consensus 209 ~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 209 PTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred hhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999986
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=8.8e-65 Score=473.21 Aligned_cols=230 Identities=32% Similarity=0.451 Sum_probs=206.3
Q ss_pred chhhc--cCccHHHHHHHHHHHHHHhCCChhhhHHHHHhc-----ccccc--cCCceeecccCCCCccccccccCCCC-c
Q 045164 34 NYYAE--SCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFH-----DCIVK--SCDASLLLKKAGGIVSEQASERSFGM-R 103 (334)
Q Consensus 34 ~fY~~--sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FH-----Dcfv~--GcDgSilld~~~~~~~E~~~~~N~~L-~ 103 (334)
+||.. -|+.+++.+++.+++.+ .|++++|.||||+|| ||+++ ||||||.. .+|+++++|.+| +
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~~ 76 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIHI 76 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHHH
Confidence 56654 38899999999999987 789999999999999 88876 99999943 469999999999 6
Q ss_pred hhHHHHHHHHHHhhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCcccccccCCCCCCCCHHHHHHHHHH-
Q 045164 104 NFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQS- 182 (334)
Q Consensus 104 g~~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~- 182 (334)
||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|+.++.+ +.+||.|+.++++|++.|++
T Consensus 77 ~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~ 148 (250)
T PLN02364 77 ALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAKQ 148 (250)
T ss_pred HHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHHh
Confidence 999999999998 589999999999999999999999999999999999864 46799999999999999997
Q ss_pred CCCCcccceeeecccccccccccccccccCCCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccChHHHHHh
Q 045164 183 TGIDVEGTVALLGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNL 262 (334)
Q Consensus 183 ~Gl~~~elVaLsGaHTiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy~~l 262 (334)
+|||++|||||+||||||++|| .|+. ..+.+ + .||.+|||+||++|
T Consensus 149 ~Gl~~~d~VaLsGaHTiG~~hc----~r~~------------------------~~g~~-----~-~tp~~fDn~Yy~~l 194 (250)
T PLN02364 149 MGLSDKDIVALSGAHTLGRCHK----DRSG------------------------FEGAW-----T-SNPLIFDNSYFKEL 194 (250)
T ss_pred cCCCHHHheeeecceeeccccC----CCCC------------------------CCCCC-----C-CCCCccchHHHHHH
Confidence 5999999999999999999999 2320 01112 2 68999999999999
Q ss_pred hcc--cccch--hhhhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHhhcCCCC
Q 045164 263 LNQ--KGLLI--VDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPL 312 (334)
Q Consensus 263 ~~~--~glL~--SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~ 312 (334)
+.+ +|+|. ||++|+.|++|+.+|+.||.|+++|+++|++||+||++||+-
T Consensus 195 l~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 195 LSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred hcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 999 89865 999999999999999999999999999999999999999874
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.7e-64 Score=484.45 Aligned_cols=238 Identities=28% Similarity=0.356 Sum_probs=214.2
Q ss_pred HHHHHHHHHHHHHHhC---CChhhhHHHHHhccccc------------ccCCceeecccCCCCccccccccCCCCchhHH
Q 045164 43 AEDIIKQQVINLYNKH---GNTAVSWVRNLFHDCIV------------KSCDASLLLKKAGGIVSEQASERSFGMRNFRY 107 (334)
Q Consensus 43 ~e~iVr~~v~~~~~~d---~~~aa~llRL~FHDcfv------------~GcDgSilld~~~~~~~E~~~~~N~~L~g~~~ 107 (334)
+|..|+++|++.+..+ ...|+.+|||+||||++ +||||||||++ ..|+++++|.||+ ++
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~----~~E~~~~~N~gL~--~v 89 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFD----DIETAFHANIGLD--EI 89 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCC----cccccCCCCCCHH--HH
Confidence 4889999999999855 45678899999999996 79999999974 3699999999998 99
Q ss_pred HHHHHHHHhhhCCCccChhhHHHhhhhhhhh-hcCCCccccccCCCCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCC
Q 045164 108 VDTIKEALEEECPVTVSCADIVALSAREGIV-MLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGID 186 (334)
Q Consensus 108 I~~iK~~le~~cp~~VScADilalAar~aV~-~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~ 186 (334)
|+.+|..+|+.| |||||||+||||+||+ +.|||.|+|++||+|++++.+ +++||.|+.++++|++.|+++||+
T Consensus 90 vd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~Gf~ 163 (328)
T cd00692 90 VEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAGFS 163 (328)
T ss_pred HHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCC
Confidence 999999999998 9999999999999999 569999999999999998853 458999999999999999999999
Q ss_pred cccceeeecccccccccccccccccCCCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccChHHHHHhh-cc
Q 045164 187 VEGTVALLGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLL-NQ 265 (334)
Q Consensus 187 ~~elVaLsGaHTiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy~~l~-~~ 265 (334)
.+|||||+||||||++|. +||+++ + .++| .||.+|||+||++++ ++
T Consensus 164 ~~E~VaLsGAHTiG~a~~----------~Dps~~---------------g-------~p~D-~TP~~FDn~Yf~~ll~~~ 210 (328)
T cd00692 164 PDELVALLAAHSVAAQDF----------VDPSIA---------------G-------TPFD-STPGVFDTQFFIETLLKG 210 (328)
T ss_pred HHHHhhhcccccccccCC----------CCCCCC---------------C-------CCCC-CCcchhcHHHHHHHHHcC
Confidence 999999999999999982 466654 1 4567 699999999999987 55
Q ss_pred cc-------------------cchhhhhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCCCCCCccccccccc
Q 045164 266 KG-------------------LLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYA 326 (334)
Q Consensus 266 ~g-------------------lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~ 326 (334)
++ +|+||++|+.|++|+.+|++||+||++|+++|++||+||++|||. +..+.+|+.|
T Consensus 211 ~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs~v 286 (328)
T cd00692 211 TAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDCSDV 286 (328)
T ss_pred CCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccCccc
Confidence 55 499999999999999999999999999999999999999999886 4488899999
Q ss_pred cCC
Q 045164 327 NSN 329 (334)
Q Consensus 327 n~~ 329 (334)
++.
T Consensus 287 ~p~ 289 (328)
T cd00692 287 IPP 289 (328)
T ss_pred CCC
Confidence 853
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=3e-63 Score=462.30 Aligned_cols=220 Identities=30% Similarity=0.409 Sum_probs=197.8
Q ss_pred HHHHHHHHHHHHHhCCChhhhHHHHHhccccc-------ccCCceeecccCCCCccccccccCCCCc-hhHHHHHHHHHH
Q 045164 44 EDIIKQQVINLYNKHGNTAVSWVRNLFHDCIV-------KSCDASLLLKKAGGIVSEQASERSFGMR-NFRYVDTIKEAL 115 (334)
Q Consensus 44 e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv-------~GcDgSilld~~~~~~~E~~~~~N~~L~-g~~~I~~iK~~l 115 (334)
.+-+++.+.+.+ .+...+|.+|||+||||.+ +||||||.+ ..|+++++|.||+ ++++|++||+++
T Consensus 17 ~~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf------~~E~~~~~N~gL~~~~~~i~~iK~~~ 89 (251)
T PLN02879 17 VQRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRH------PQELAHDANNGLDIAVRLLDPIKELF 89 (251)
T ss_pred HHHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecC------hhhccCCCcCChHHHHHHHHHHHHHc
Confidence 345577777766 4679999999999999975 899999975 3699999999999 999999999998
Q ss_pred hhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCCcccceeeec
Q 045164 116 EEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLG 195 (334)
Q Consensus 116 e~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLsG 195 (334)
++|||||||+||+|+||+++|||.|+|++||+|+.++. ++.+||+|+.++++|++.|+++||+++|||||||
T Consensus 90 -----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~---~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsG 161 (251)
T PLN02879 90 -----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPP---PEGRLPQATKGVDHLRDVFGRMGLNDKDIVALSG 161 (251)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCC---cccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeec
Confidence 58999999999999999999999999999999999874 3568999999999999999999999999999999
Q ss_pred ccccccccccccccccCCCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccChHHHHHhhcc--ccc--chh
Q 045164 196 AHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLNQ--KGL--LIV 271 (334)
Q Consensus 196 aHTiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy~~l~~~--~gl--L~S 271 (334)
|||||++||. |. +.++.| | .||.+|||+||++|+.+ +|+ |+|
T Consensus 162 aHTiG~ah~~----r~------------------------g~~g~~-----d-~tp~~FDN~Yy~~ll~~~~~gll~L~S 207 (251)
T PLN02879 162 GHTLGRCHKE----RS------------------------GFEGAW-----T-PNPLIFDNSYFKEILSGEKEGLLQLPT 207 (251)
T ss_pred cccccccccc----cc------------------------cCCCCC-----C-CCccceeHHHHHHHHcCCcCCCccchh
Confidence 9999999994 31 111123 4 68999999999999999 888 689
Q ss_pred hhhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHhhcCCCC
Q 045164 272 DQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPL 312 (334)
Q Consensus 272 D~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~ 312 (334)
|++|+.|++|+++|++||+||++|+++|++||+||++||+.
T Consensus 208 D~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 208 DKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred hHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 99999999999999999999999999999999999999975
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=2.5e-59 Score=438.60 Aligned_cols=223 Identities=32% Similarity=0.441 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHhCCChhhhHHHHHhcccccc--------cCCceeecccCCCCccccccccCCCC-chhHHHHHHHHHHh
Q 045164 46 IIKQQVINLYNKHGNTAVSWVRNLFHDCIVK--------SCDASLLLKKAGGIVSEQASERSFGM-RNFRYVDTIKEALE 116 (334)
Q Consensus 46 iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~--------GcDgSilld~~~~~~~E~~~~~N~~L-~g~~~I~~iK~~le 116 (334)
.|++.|++.+.+++.+++++|||+||||++. ||||||++++ |+++++|.+| +++++|++||.++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~------e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP------ELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc------cccCcccccHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999996 9999999973 9999999996 79999999999999
Q ss_pred hhCCCccChhhHHHhhhhhhhhhc--CCCccccccCCCCCCCCc--ccccccCCCCCCCCHHHHHHHHHHCCCCccccee
Q 045164 117 EECPVTVSCADIVALSAREGIVML--GGPRIEMKTGRRDSKESY--FTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVA 192 (334)
Q Consensus 117 ~~cp~~VScADilalAar~aV~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVa 192 (334)
+ |++|||||||++|+++||+.+ |||.|+|++||+|+..+. ...+..++|.|+.+++++++.|+++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 899999999999999999999 999999999999999764 3355667888899999999999999999999999
Q ss_pred ee-ccccc-ccccccccccccCCCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccChHHHHHhhccc----
Q 045164 193 LL-GAHSV-GRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLNQK---- 266 (334)
Q Consensus 193 Ls-GaHTi-G~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy~~l~~~~---- 266 (334)
|+ ||||| |++||..|..|+ |+ +++.||.+|||+||++++.++
T Consensus 154 L~~GaHti~G~~~~~~~~~~~-------------------~~-------------~~~~tp~~fDN~yy~~l~~~~~~~~ 201 (255)
T cd00314 154 LSAGAHTLGGKNHGDLLNYEG-------------------SG-------------LWTSTPFTFDNAYFKNLLDMNWEWR 201 (255)
T ss_pred hccCCeeccCcccCCCCCccc-------------------CC-------------CCCCCCCccchHHHHHHhcCCcccc
Confidence 99 99999 999998775553 22 234799999999999999988
Q ss_pred ------------ccchhhhhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHhhc
Q 045164 267 ------------GLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSE 308 (334)
Q Consensus 267 ------------glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 308 (334)
++|+||++|+.|++|+.+|++||.|+++|+++|++||+||++
T Consensus 202 ~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 202 VGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred cCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=2.2e-56 Score=436.27 Aligned_cols=260 Identities=20% Similarity=0.253 Sum_probs=228.0
Q ss_pred HHHHHHHHHHHHHhC--------CChhhhHHHHHhccccc-------ccCC-ceeecccCCCCccccccccCCCCc-hhH
Q 045164 44 EDIIKQQVINLYNKH--------GNTAVSWVRNLFHDCIV-------KSCD-ASLLLKKAGGIVSEQASERSFGMR-NFR 106 (334)
Q Consensus 44 e~iVr~~v~~~~~~d--------~~~aa~llRL~FHDcfv-------~GcD-gSilld~~~~~~~E~~~~~N~~L~-g~~ 106 (334)
.+.|+++|++.+... ...+|.+|||+|||+.+ +|++ |+|.+. +|++++.|.+|. ++.
T Consensus 44 ~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------pe~~~~~N~gL~~a~~ 117 (409)
T cd00649 44 LEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------PLNSWPDNVNLDKARR 117 (409)
T ss_pred HHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------cccCcHhhhhHHHHHH
Confidence 368899999998754 47999999999999997 7886 788664 699999999996 899
Q ss_pred HHHHHHHHHhhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCccc--------------------------
Q 045164 107 YVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFT-------------------------- 160 (334)
Q Consensus 107 ~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~-------------------------- 160 (334)
+++.||+++ |..||+||+|+||+..||+.+|||.|+|.+||.|...+...
T Consensus 118 ~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~ 193 (409)
T cd00649 118 LLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLA 193 (409)
T ss_pred HHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchh
Confidence 999999998 34799999999999999999999999999999999754310
Q ss_pred ---------ccc--cCCCCCCCCHHHHHHHHHHCCCCcccceee-ecccccccccccccccccCCCCCCCCChHHHHHHh
Q 045164 161 ---------EVD--KLIPNHNDSLSTVLSAFQSTGIDVEGTVAL-LGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLK 228 (334)
Q Consensus 161 ---------~~~--~~lP~p~~~~~~l~~~F~~~Gl~~~elVaL-sGaHTiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~ 228 (334)
.++ ..||+|..++.+|++.|++||||++||||| +||||||++||..|.+|+. +||++++.|++.|+
T Consensus 194 a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg--~dP~~~~~~~~gLg 271 (409)
T cd00649 194 AVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG--PEPEAAPIEQQGLG 271 (409)
T ss_pred hhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC--CCCCcCHHHHHhhc
Confidence 112 279999999999999999999999999999 5999999999999999994 89999999999996
Q ss_pred --ccCCCCCCCCCCccccCCC---CCCCCccChHHHHHhhc------------------------------------ccc
Q 045164 229 --RRCPTPNPDPKAVLYARND---PETPMIIDNNYYKNLLN------------------------------------QKG 267 (334)
Q Consensus 229 --~~Cp~~~~~~~~~~~~~~D---~~tp~~FDN~Yy~~l~~------------------------------------~~g 267 (334)
..||...+.++.. ..+| +.||.+|||+||++|++ ++|
T Consensus 272 w~~~Cp~g~g~~t~~--sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~g 349 (409)
T cd00649 272 WKNSYGTGKGKDTIT--SGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAPM 349 (409)
T ss_pred ccccCCCCCCCCCcc--ccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccCcc
Confidence 8999322333333 5677 47999999999999998 568
Q ss_pred cchhhhhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHh--hcCCCCCCCCC
Q 045164 268 LLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLL--SENNPLTEDQG 317 (334)
Q Consensus 268 lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~igv~tg~~G 317 (334)
+|+||++|+.|++++++|++||+|+++||++|++||+|| +++||++--.|
T Consensus 350 mL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 350 MLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred cchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 999999999999999999999999999999999999999 69999987655
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.6e-53 Score=439.73 Aligned_cols=258 Identities=21% Similarity=0.251 Sum_probs=223.9
Q ss_pred HHHHHHHHHHHHhC--------CChhhhHHHHHhccccc-------ccC-CceeecccCCCCccccccccCCCCc-hhHH
Q 045164 45 DIIKQQVINLYNKH--------GNTAVSWVRNLFHDCIV-------KSC-DASLLLKKAGGIVSEQASERSFGMR-NFRY 107 (334)
Q Consensus 45 ~iVr~~v~~~~~~d--------~~~aa~llRL~FHDcfv-------~Gc-DgSilld~~~~~~~E~~~~~N~~L~-g~~~ 107 (334)
+.|+++|++.+... ...+|-+|||+||++.+ ||| .|+|.+. +|++++.|.+|. ++.+
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------P~~sw~~N~~Ldka~~l 128 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------PLNSWPDNVNLDKARRL 128 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------cccCchhhhhHHHHHHH
Confidence 57899999998763 47999999999999987 788 4788664 699999999996 8899
Q ss_pred HHHHHHHHhhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCc-----------------------------
Q 045164 108 VDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESY----------------------------- 158 (334)
Q Consensus 108 I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~----------------------------- 158 (334)
++.||++ ||++|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 129 L~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~ 204 (716)
T TIGR00198 129 LWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAAT 204 (716)
T ss_pred HHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhh
Confidence 9999886 7889999999999999999999999999999999994321
Q ss_pred --------ccccccCCCCCCCCHHHHHHHHHHCCCCcccceeee-cccccccccccccccccCCCCCCCCChHHHHHHhc
Q 045164 159 --------FTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALL-GAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKR 229 (334)
Q Consensus 159 --------~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs-GaHTiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~ 229 (334)
+.. ...+|+|..++.+|++.|+++|||++|||||+ ||||||++||.+|.+|+ .+||++++.|++.|+.
T Consensus 205 ~~Gliyvnpeg-~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl--g~dP~~~~~~~~gLg~ 281 (716)
T TIGR00198 205 EMGLIYVNPEG-PDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI--GPDPEGAPIEEQGLGW 281 (716)
T ss_pred hccccccCccc-ccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC--CCCCCcCHHHHHHhcc
Confidence 111 22699999999999999999999999999996 99999999999999998 3899999999999999
Q ss_pred cCCCCCCC--CCCccccCCC---CCCCCccChHHHHHhhcc----------------------------------cccch
Q 045164 230 RCPTPNPD--PKAVLYARND---PETPMIIDNNYYKNLLNQ----------------------------------KGLLI 270 (334)
Q Consensus 230 ~Cp~~~~~--~~~~~~~~~D---~~tp~~FDN~Yy~~l~~~----------------------------------~glL~ 270 (334)
.||...|. ++.+ ..+| ..||.+|||+||+||+.+ .++|+
T Consensus 282 ~c~~~~g~g~dt~~--sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~ 359 (716)
T TIGR00198 282 HNQYGKGVGRDTMT--SGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLD 359 (716)
T ss_pred cCCCCCCCCCCccc--ccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCccc
Confidence 99953332 2223 5566 479999999999999975 68999
Q ss_pred hhhhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHhh--cCCCCCCCCC
Q 045164 271 VDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLS--ENNPLTEDQG 317 (334)
Q Consensus 271 SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~igv~tg~~G 317 (334)
||++|..|++++++|++||.|+++|+++|++||+||+ ++|++.---|
T Consensus 360 SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~y~g 408 (716)
T TIGR00198 360 ADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSRYIG 408 (716)
T ss_pred hhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhhhcC
Confidence 9999999999999999999999999999999999998 5666554333
No 12
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=3.3e-51 Score=381.36 Aligned_cols=232 Identities=21% Similarity=0.277 Sum_probs=186.2
Q ss_pred CCcchhhccCccHHHHHHHHHHHHHHhCCChhhhHHHHHhcccc-------cccCCceeecccCCCCccccc-cccCCCC
Q 045164 31 LQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCI-------VKSCDASLLLKKAGGIVSEQA-SERSFGM 102 (334)
Q Consensus 31 l~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcf-------v~GcDgSilld~~~~~~~E~~-~~~N~~L 102 (334)
++.+||... ..+.|...-......+++++|+||||+||||| ++||||||+++. ..+|+. .+.|.+|
T Consensus 14 ~~~g~~~~~---f~~~v~~c~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~---~~~En~G~~~n~~l 87 (264)
T cd08201 14 LQSGYSARG---FVAGVTPCTDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYEL---DRPENIGSGFNTTL 87 (264)
T ss_pred hcccceecc---cccccccccccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecC---CChhhccCchhhcc
Confidence 344555542 22233344444555789999999999999999 899999999973 246777 5566678
Q ss_pred chhHHHHHHHHHHhhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCcccccccCCCCCCCCHHHHHHHHHH
Q 045164 103 RNFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQS 182 (334)
Q Consensus 103 ~g~~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~ 182 (334)
++|+.|+.+ +||||||||||+|+||+.+|||.|+|++||+|+.++.+. .||.|+.++++|++.|++
T Consensus 88 ~~~~~i~~~----------~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~ 153 (264)
T cd08201 88 NFFVNFYSP----------RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRR 153 (264)
T ss_pred ccceeeccC----------ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHH
Confidence 888877543 699999999999999999999999999999999988653 499999999999999999
Q ss_pred CCCCcccceeeec-ccccccccccccccccCCCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccChHHHHH
Q 045164 183 TGIDVEGTVALLG-AHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKN 261 (334)
Q Consensus 183 ~Gl~~~elVaLsG-aHTiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy~~ 261 (334)
+||+.+|||+||| |||||++||..|.++.- |. ...++ . .+|| .||.+|||+||.+
T Consensus 154 ~Gfs~~DmVaLsggaHTiG~ahc~~f~~~~~----~g----------------~~~~~-~--~p~d-stp~~FDn~~f~E 209 (264)
T cd08201 154 QGFSTSEMIALVACGHTLGGVHSEDFPEIVP----PG----------------SVPDT-V--LQFF-DTTIQFDNKVVTE 209 (264)
T ss_pred cCCChHHHheeecCCeeeeecccccchhhcC----Cc----------------cccCC-C--CCCC-CCccccchHHHHH
Confidence 9999999999995 99999999998876641 11 00001 1 4667 7999999999999
Q ss_pred hhccc--c--------cchhhhhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHhhc
Q 045164 262 LLNQK--G--------LLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSE 308 (334)
Q Consensus 262 l~~~~--g--------lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 308 (334)
++.+. + .+.||..+|..+... .++..| +++.|.+.++..+.||.+
T Consensus 210 ~l~g~~~~~L~~~~~~~~~sd~r~f~~d~n~-t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 210 YLSGTTNNPLVVGPNNTTNSDLRIFSSDGNV-TMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred HhcCCCCCceeecCCCCccchhhheecCccH-HHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 99874 2 357999999876654 577787 799999999999999974
No 13
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=4.7e-50 Score=411.87 Aligned_cols=260 Identities=20% Similarity=0.259 Sum_probs=223.9
Q ss_pred HHHHHHHHHHHHHhC--------CChhhhHHHHHhccccc-------ccCC-ceeecccCCCCccccccccCCCCc-hhH
Q 045164 44 EDIIKQQVINLYNKH--------GNTAVSWVRNLFHDCIV-------KSCD-ASLLLKKAGGIVSEQASERSFGMR-NFR 106 (334)
Q Consensus 44 e~iVr~~v~~~~~~d--------~~~aa~llRL~FHDcfv-------~GcD-gSilld~~~~~~~E~~~~~N~~L~-g~~ 106 (334)
.+.|+++|++.+... ...+|-+|||+||++.+ +||+ |+|.+ .+|++++.|.+|. ++.
T Consensus 56 ~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf------~pe~~w~~N~gL~ka~~ 129 (726)
T PRK15061 56 LEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRF------APLNSWPDNVNLDKARR 129 (726)
T ss_pred HHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccC------cccccchhhhhHHHHHH
Confidence 357999999988753 47899999999999997 7886 78865 4699999999996 899
Q ss_pred HHHHHHHHHhhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCccc--------------------------
Q 045164 107 YVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFT-------------------------- 160 (334)
Q Consensus 107 ~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~-------------------------- 160 (334)
++++||+++ |..||.||+|+||+..|||.+|||.|+|.+||.|...+...
T Consensus 130 ~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl 205 (726)
T PRK15061 130 LLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPL 205 (726)
T ss_pred HHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccch
Confidence 999999998 45799999999999999999999999999999998654320
Q ss_pred ------------ccccCCCCCCCCHHHHHHHHHHCCCCcccceeee-cccccccccccccccccCCCCCCCCChHHHHHH
Q 045164 161 ------------EVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALL-GAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYL 227 (334)
Q Consensus 161 ------------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs-GaHTiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L 227 (334)
+....+|+|..++.+|++.|++||||++|||||+ ||||||++||..|.+|+ .+||++++.|++.|
T Consensus 206 ~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl--gpdP~~a~~~~qgL 283 (726)
T PRK15061 206 AAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV--GPEPEAAPIEEQGL 283 (726)
T ss_pred hhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc--CCCCCcCHHHHHhc
Confidence 0112389999999999999999999999999995 99999999999999998 48999999999998
Q ss_pred h--ccCCCCCCCCCCccccCCC---CCCCCccChHHHHHhhcc------------------------------------c
Q 045164 228 K--RRCPTPNPDPKAVLYARND---PETPMIIDNNYYKNLLNQ------------------------------------K 266 (334)
Q Consensus 228 ~--~~Cp~~~~~~~~~~~~~~D---~~tp~~FDN~Yy~~l~~~------------------------------------~ 266 (334)
. ..||...+.++.+ ..+| ..||.+|||+||++|+.+ .
T Consensus 284 gw~~~c~~g~g~dt~t--sGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~~ 361 (726)
T PRK15061 284 GWKNSYGSGKGADTIT--SGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHAP 361 (726)
T ss_pred cccccCCCCCCCCCcc--ccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccccCc
Confidence 5 8999322333333 4567 479999999999999985 5
Q ss_pred ccchhhhhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHh--hcCCCCCCCCC
Q 045164 267 GLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLL--SENNPLTEDQG 317 (334)
Q Consensus 267 glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~igv~tg~~G 317 (334)
++|+||++|..|++++++|++||+|+++|+++|++||.|| ..+|+++---|
T Consensus 362 ~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 362 TMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred ccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 8999999999999999999999999999999999999999 55777665444
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=2.5e-39 Score=305.13 Aligned_cols=219 Identities=17% Similarity=0.231 Sum_probs=180.5
Q ss_pred HHHHHHHHhCCChhhhHHHHHhccccc-------ccCCce-eecccCCCCccccccccCCC--Cc-hhHHHHHHHHHHhh
Q 045164 49 QQVINLYNKHGNTAVSWVRNLFHDCIV-------KSCDAS-LLLKKAGGIVSEQASERSFG--MR-NFRYVDTIKEALEE 117 (334)
Q Consensus 49 ~~v~~~~~~d~~~aa~llRL~FHDcfv-------~GcDgS-illd~~~~~~~E~~~~~N~~--L~-g~~~I~~iK~~le~ 117 (334)
+.+++.+......++.+|||+||++.+ ||++|+ |.| .+|++++.|.+ |. .+.++++||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl------~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL------APQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC------ccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 667777778788999999999999987 799998 655 46999999998 86 89999999999842
Q ss_pred hC-C-CccChhhHHHhhhhhhhhhcCC-----CccccccCCCCCCCCcccccc---cCCCCCC------------CCHHH
Q 045164 118 EC-P-VTVSCADIVALSAREGIVMLGG-----PRIEMKTGRRDSKESYFTEVD---KLIPNHN------------DSLST 175 (334)
Q Consensus 118 ~c-p-~~VScADilalAar~aV~~~GG-----P~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~~~~ 175 (334)
.- + ..||.||+|+||+..|||.+|| |.++|.+||.|...+.. +++ ..+|.+. .+.+.
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~t-d~~sf~~l~P~adg~rny~~~~~~~~~~~~ 169 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQT-DVESFEVLEPKADGFRNYLKKGYRVPPEEM 169 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCC-CcccccccCCCCcccccccccCCCCCHHHH
Confidence 21 1 1699999999999999999999 99999999999987632 111 1345432 23477
Q ss_pred HHHHHHHCCCCcccceeeeccc-ccccccccccccccCCCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCcc
Q 045164 176 VLSAFQSTGIDVEGTVALLGAH-SVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMII 254 (334)
Q Consensus 176 l~~~F~~~Gl~~~elVaLsGaH-TiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~F 254 (334)
|++.|.++|||++|||||+||| ++|+.|..+ ..+.| + .+|.+|
T Consensus 170 Lrd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s------------------------------~~G~w--T----~~p~~f 213 (297)
T cd08200 170 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGS------------------------------KHGVF--T----DRPGVL 213 (297)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCC------------------------------CCCCC--c----CCCCcc
Confidence 9999999999999999999997 699877421 11234 2 689999
Q ss_pred ChHHHHHhhcc--------------------cc-----cchhhhhhccCCCcHHHHHHhhhC--hHHHHHHHHHHHHHhh
Q 045164 255 DNNYYKNLLNQ--------------------KG-----LLIVDQQLASDPRTAPFVEKMAAD--NGYFHQQFSRAVGLLS 307 (334)
Q Consensus 255 DN~Yy~~l~~~--------------------~g-----lL~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~ 307 (334)
||.||++|+.. .| .+++|.+|.+|++.|++|+.||.| +++||++|++||.||.
T Consensus 214 ~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klm 293 (297)
T cd08200 214 TNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVM 293 (297)
T ss_pred ccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 99999999951 01 268899999999999999999998 9999999999999999
Q ss_pred cCC
Q 045164 308 ENN 310 (334)
Q Consensus 308 ~ig 310 (334)
++.
T Consensus 294 eld 296 (297)
T cd08200 294 NLD 296 (297)
T ss_pred hcC
Confidence 874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=2.4e-34 Score=297.64 Aligned_cols=220 Identities=16% Similarity=0.235 Sum_probs=177.5
Q ss_pred HHHHHHHHH---HHhCCChhhhHHHHHhccccc-------ccCCce-eecccCCCCccccccccC--CCCc-hhHHHHHH
Q 045164 46 IIKQQVINL---YNKHGNTAVSWVRNLFHDCIV-------KSCDAS-LLLKKAGGIVSEQASERS--FGMR-NFRYVDTI 111 (334)
Q Consensus 46 iVr~~v~~~---~~~d~~~aa~llRL~FHDcfv-------~GcDgS-illd~~~~~~~E~~~~~N--~~L~-g~~~I~~i 111 (334)
+|+++|.+. +....-..+.|||++||++.+ ||++|+ |.|. +|++++.| .+|. .+++++.|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHHH
Confidence 445655553 456677889999999999987 799998 7664 69999999 7886 89999999
Q ss_pred HHHHhhhCCCccChhhHHHhhhhhhhhhc---CCC--ccccccCCCCCCCCcccccccCCC---CC------------CC
Q 045164 112 KEALEEECPVTVSCADIVALSAREGIVML---GGP--RIEMKTGRRDSKESYFTEVDKLIP---NH------------ND 171 (334)
Q Consensus 112 K~~le~~cp~~VScADilalAar~aV~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP---~p------------~~ 171 (334)
|+++.. +.||.||+|+||+..|||.+ ||| .+++.+||.|...... ++++..| .+ ..
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCC
Confidence 999842 27999999999999999998 898 5899999999987642 2322222 11 12
Q ss_pred CHHHHHHHHHHCCCCcccceeeecc-cccccccccccccccCCCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCC
Q 045164 172 SLSTVLSAFQSTGIDVEGTVALLGA-HSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPET 250 (334)
Q Consensus 172 ~~~~l~~~F~~~Gl~~~elVaLsGa-HTiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~t 250 (334)
..+.|++.|.++|||++|||||+|| |++|+.|-.+ ..+.| + .+
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s------------------------------~~G~~--T----~~ 622 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGS------------------------------KHGVF--T----DR 622 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheecchhhccccCCCC------------------------------CCCCC--c----CC
Confidence 3566889999999999999999998 5999988421 11334 2 68
Q ss_pred CCccChHHHHHhhccc--------------------c---c--chhhhhhccCCCcHHHHHHhhhCh--HHHHHHHHHHH
Q 045164 251 PMIIDNNYYKNLLNQK--------------------G---L--LIVDQQLASDPRTAPFVEKMAADN--GYFHQQFSRAV 303 (334)
Q Consensus 251 p~~FDN~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~d~--~~F~~~Fa~Am 303 (334)
|.+|||.||++|+... | + ..+|.+|.+|++.|++|+.||.|+ ++|++||++||
T Consensus 623 p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw 702 (716)
T TIGR00198 623 VGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAW 702 (716)
T ss_pred CCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 9999999999998621 2 2 278999999999999999999997 89999999999
Q ss_pred HHhhcCCC
Q 045164 304 GLLSENNP 311 (334)
Q Consensus 304 ~Km~~igv 311 (334)
.|+.+++-
T Consensus 703 ~Klm~ldr 710 (716)
T TIGR00198 703 TKVMNLDR 710 (716)
T ss_pred HHHHhCCC
Confidence 99999873
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=7.7e-34 Score=292.40 Aligned_cols=220 Identities=16% Similarity=0.246 Sum_probs=181.4
Q ss_pred HHHHHHHHhCCChhhhHHHHHhccccc-------ccCCce-eecccCCCCccccccccCC--CCc-hhHHHHHHHHHHhh
Q 045164 49 QQVINLYNKHGNTAVSWVRNLFHDCIV-------KSCDAS-LLLKKAGGIVSEQASERSF--GMR-NFRYVDTIKEALEE 117 (334)
Q Consensus 49 ~~v~~~~~~d~~~aa~llRL~FHDcfv-------~GcDgS-illd~~~~~~~E~~~~~N~--~L~-g~~~I~~iK~~le~ 117 (334)
..+++.+....-..+.|||++||++.+ +|++|+ |.|. +|++++.|. +|. .+++++.||++++.
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 567777777788899999999999987 799998 8764 699999998 886 89999999999964
Q ss_pred hCC--CccChhhHHHhhhhhhhhhc---CC--CccccccCCCCCCCCccccccc---CCCCCC------------CCHHH
Q 045164 118 ECP--VTVSCADIVALSAREGIVML---GG--PRIEMKTGRRDSKESYFTEVDK---LIPNHN------------DSLST 175 (334)
Q Consensus 118 ~cp--~~VScADilalAar~aV~~~---GG--P~~~v~~GR~D~~~s~~~~~~~---~lP~p~------------~~~~~ 175 (334)
.-. ..||.||+|+||+..|||.+ || |.+++.+||.|.+.... ++++ .+|.+. ...+.
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~t-d~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQT-DVESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCC-CcccccccCCCCccccccccccCCCCHHHH
Confidence 322 36999999999999999988 68 99999999999987532 3322 456543 13478
Q ss_pred HHHHHHHCCCCcccceeeeccc-ccccccccccccccCCCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCcc
Q 045164 176 VLSAFQSTGIDVEGTVALLGAH-SVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMII 254 (334)
Q Consensus 176 l~~~F~~~Gl~~~elVaLsGaH-TiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~F 254 (334)
|++.|.++|||+.|||||+||| ++|+.|-.+ ..+.| + .+|.+|
T Consensus 595 L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S------------------------------~~G~~--T----~~p~~f 638 (726)
T PRK15061 595 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGS------------------------------KHGVF--T----DRPGVL 638 (726)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCC------------------------------CCCCC--c----CCCCcc
Confidence 9999999999999999999997 788877321 12334 2 589999
Q ss_pred ChHHHHHhhcc----------c----------c---c--chhhhhhccCCCcHHHHHHhhhC--hHHHHHHHHHHHHHhh
Q 045164 255 DNNYYKNLLNQ----------K----------G---L--LIVDQQLASDPRTAPFVEKMAAD--NGYFHQQFSRAVGLLS 307 (334)
Q Consensus 255 DN~Yy~~l~~~----------~----------g---l--L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~ 307 (334)
||.||+||+.. . | + +.+|.+|.+|++.|++|+.||.| +++|++||++||.|+.
T Consensus 639 sNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvm 718 (726)
T PRK15061 639 TNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVM 718 (726)
T ss_pred ccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 99999999952 1 1 1 47899999999999999999999 9999999999999999
Q ss_pred cCCC
Q 045164 308 ENNP 311 (334)
Q Consensus 308 ~igv 311 (334)
+++-
T Consensus 719 eldr 722 (726)
T PRK15061 719 NLDR 722 (726)
T ss_pred hCCC
Confidence 9873
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.97 E-value=2.4e-30 Score=255.98 Aligned_cols=253 Identities=20% Similarity=0.253 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHhC--------CChhhhHHHHHhccccc-------ccCCceeecccCCCCccccccccCCCCc-hhHHHH
Q 045164 46 IIKQQVINLYNKH--------GNTAVSWVRNLFHDCIV-------KSCDASLLLKKAGGIVSEQASERSFGMR-NFRYVD 109 (334)
Q Consensus 46 iVr~~v~~~~~~d--------~~~aa~llRL~FHDcfv-------~GcDgSilld~~~~~~~E~~~~~N~~L~-g~~~I~ 109 (334)
.|+++++..+... ....+.+|||+||-+++ +|..+. ..++.++.++|.|.+|+ ++.++.
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G-----~qRFaPlnSWPDN~nLDKarRLLW 145 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGG-----QQRFAPLNSWPDNANLDKARRLLW 145 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCC-----ceecccccCCCcccchHHHHHHhh
Confidence 4556666655542 35789999999999987 344332 23567899999999997 999999
Q ss_pred HHHHHHhhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCccc-----------------------------
Q 045164 110 TIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFT----------------------------- 160 (334)
Q Consensus 110 ~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~----------------------------- 160 (334)
.||+++ +..+|.||++.|++..|++.+|++.+.+..||.|-..+...
T Consensus 146 PIKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaavq 221 (730)
T COG0376 146 PIKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQ 221 (730)
T ss_pred hHhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhhe
Confidence 999998 46899999999999999999999999999999998766540
Q ss_pred --------ccccCCCCCCCCHHHHHHHHHHCCCCcccceeee-cccccccccccccccccCCCCCCCCChHHHHHHhc--
Q 045164 161 --------EVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALL-GAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKR-- 229 (334)
Q Consensus 161 --------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~elVaLs-GaHTiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~-- 229 (334)
+-.+..|+|..+..+++..|++++|+++|.|||+ ||||+|++|...-.+.+ .++|.--+--.+.|-.
T Consensus 222 MGLIYVNPEGpng~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v--g~ePe~a~ie~qGlGW~~ 299 (730)
T COG0376 222 MGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV--GPEPEAAPIEQQGLGWAN 299 (730)
T ss_pred eeeEEeCCCCCCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc--CCCccccchhhhcccccc
Confidence 1234689999999999999999999999999998 69999999976533333 3666655444444432
Q ss_pred cCCCCCCCCCCc--cccCCCCCCCCccChHHHHHhhccc-----------------------------------ccchhh
Q 045164 230 RCPTPNPDPKAV--LYARNDPETPMIIDNNYYKNLLNQK-----------------------------------GLLIVD 272 (334)
Q Consensus 230 ~Cp~~~~~~~~~--~~~~~D~~tp~~FDN~Yy~~l~~~~-----------------------------------glL~SD 272 (334)
.|-...|.++.+ ..+.+. .||++|||+||.+|+... .+|++|
T Consensus 300 ~~g~G~G~dtitsGlE~~Wt-~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttD 378 (730)
T COG0376 300 TYGSGKGPDTITSGLEGAWT-TTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTD 378 (730)
T ss_pred ccCCCcCcccccccccccCC-CCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccc
Confidence 333111221111 002233 689999999999998641 589999
Q ss_pred hhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHhhcCC
Q 045164 273 QQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENN 310 (334)
Q Consensus 273 ~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ig 310 (334)
.+|..||..+++.++|.+|++.|.+.|++||.||..-.
T Consensus 379 laLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 379 LALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred hhhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999997643
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.41 E-value=2.1e-12 Score=129.23 Aligned_cols=215 Identities=17% Similarity=0.258 Sum_probs=155.8
Q ss_pred HHHHHHHHhCCChhhhHHHHHhccccc-------ccCCce-eecccCCCCccccccccCC--CCc-hhHHHHHHHHHHhh
Q 045164 49 QQVINLYNKHGNTAVSWVRNLFHDCIV-------KSCDAS-LLLKKAGGIVSEQASERSF--GMR-NFRYVDTIKEALEE 117 (334)
Q Consensus 49 ~~v~~~~~~d~~~aa~llRL~FHDcfv-------~GcDgS-illd~~~~~~~E~~~~~N~--~L~-g~~~I~~iK~~le~ 117 (334)
..++..+.+..-....|+-.+|-.+-+ +|.+|. |.|. +.++++.|. -|. -+.+++.|.+.++
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 466777777778889999999998876 577775 6664 579999996 443 6889999998886
Q ss_pred hCCCccChhhHHHhhhhhhhhhc---CCCc--cccccCCCCCCCCccccccc-CC--CCC------------CCCHHHHH
Q 045164 118 ECPVTVSCADIVALSAREGIVML---GGPR--IEMKTGRRDSKESYFTEVDK-LI--PNH------------NDSLSTVL 177 (334)
Q Consensus 118 ~cp~~VScADilalAar~aV~~~---GGP~--~~v~~GR~D~~~s~~~~~~~-~l--P~p------------~~~~~~l~ 177 (334)
-.||.||+|+|++..||+.+ +|-. +++.+||.|+..... ++++ .+ |-. ..+.+-|+
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqt-Dv~sf~~LeP~aDGfRNy~~~~~~~~pe~~Lv 600 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQT-DVESFAVLEPIADGFRNYVKKDYVLTPEELLV 600 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhc-chhhhhcccccchhhhhhccCCCcCCHHHHHH
Confidence 36999999999999999863 6665 577899999986543 2211 11 111 12245577
Q ss_pred HHHHHCCCCcccceeeeccc-ccccccccccccccCCCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccCh
Q 045164 178 SAFQSTGIDVEGTVALLGAH-SVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDN 256 (334)
Q Consensus 178 ~~F~~~Gl~~~elVaLsGaH-TiG~~hc~~f~~Rl~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN 256 (334)
+.-+-.+||..||++|+||- .+|.-+.. ...+.+ - ..|..+.|
T Consensus 601 DkAqlL~LtapemtVLiGGlRvLg~n~g~------------------------------s~~GVf----T--~~pg~Ltn 644 (730)
T COG0376 601 DKAQLLTLTAPEMTVLIGGLRVLGANYGG------------------------------SKHGVF----T--DRPGVLTN 644 (730)
T ss_pred HHHHHhccCCccceEEEcceEeeccCCCC------------------------------Ccccee----c--cCcccccc
Confidence 88888999999999999864 44432210 011111 1 35777888
Q ss_pred HHHHHhhcc----------cccc---------------hhhhhhccCCCcHHHHHHhhhC--hHHHHHHHHHHHHHhhcC
Q 045164 257 NYYKNLLNQ----------KGLL---------------IVDQQLASDPRTAPFVEKMAAD--NGYFHQQFSRAVGLLSEN 309 (334)
Q Consensus 257 ~Yy~~l~~~----------~glL---------------~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~i 309 (334)
.||.||+.- ++++ ..|..+-+++..|.+.+-||.| +++|.++|+.||.|..++
T Consensus 645 dFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~ 724 (730)
T COG0376 645 DFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNL 724 (730)
T ss_pred hhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhcc
Confidence 888888752 1222 4677777889999999999975 789999999999999887
Q ss_pred C
Q 045164 310 N 310 (334)
Q Consensus 310 g 310 (334)
.
T Consensus 725 D 725 (730)
T COG0376 725 D 725 (730)
T ss_pred c
Confidence 5
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=50.46 E-value=82 Score=31.16 Aligned_cols=77 Identities=10% Similarity=0.170 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHHhhhCCCccChhhHHHhhhhhhh--hhcCCCccccccCCCCCCCCcccccccCCCCCC---CCHHHHHH
Q 045164 104 NFRYVDTIKEALEEECPVTVSCADIVALSAREGI--VMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHN---DSLSTVLS 178 (334)
Q Consensus 104 g~~~I~~iK~~le~~cp~~VScADilalAar~aV--~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~---~~~~~l~~ 178 (334)
|++.+..++++ .|.|-=-+.+....|+ ..+|-..+..+.||.+...-.+.......+... ..+.++.+
T Consensus 149 Gi~Aa~~L~~e-------GI~~N~TlvFS~~QA~aaaeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~ 221 (333)
T PTZ00411 149 GIQAAKALEKE-------GIHCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYN 221 (333)
T ss_pred HHHHHHHHHHC-------CCceeEeEecCHHHHHHHHHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHH
Confidence 65555544332 3444333444444443 345778899999999554322111111112122 34677788
Q ss_pred HHHHCCCCc
Q 045164 179 AFQSTGIDV 187 (334)
Q Consensus 179 ~F~~~Gl~~ 187 (334)
.|++.|+..
T Consensus 222 ~~k~~g~~T 230 (333)
T PTZ00411 222 YYKKHGYKT 230 (333)
T ss_pred HHHHcCCCe
Confidence 888999865
No 20
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=42.49 E-value=31 Score=29.70 Aligned_cols=34 Identities=21% Similarity=0.399 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHCCCCcccc-eeeecccccccccc
Q 045164 171 DSLSTVLSAFQSTGIDVEGT-VALLGAHSVGRVHC 204 (334)
Q Consensus 171 ~~~~~l~~~F~~~Gl~~~el-VaLsGaHTiG~~hc 204 (334)
+++.+.+-.|++|||++.++ |.|--+|-||+++-
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r~ 65 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVRF 65 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeecccCcchhhe
Confidence 45666677899999999998 55558999998763
No 21
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=42.22 E-value=21 Score=27.98 Aligned_cols=18 Identities=17% Similarity=0.170 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHhhcCCC
Q 045164 294 YFHQQFSRAVGLLSENNP 311 (334)
Q Consensus 294 ~F~~~Fa~Am~Km~~igv 311 (334)
+..++|..||.||+.+|-
T Consensus 2 ~m~~~F~~am~KlavLG~ 19 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGH 19 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS
T ss_pred hHHHHHHHHHHHHHHhcC
Confidence 356899999999999853
No 22
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.84 E-value=71 Score=24.49 Aligned_cols=28 Identities=11% Similarity=0.173 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCCChhhhHHHHHhccc
Q 045164 46 IIKQQVINLYNKHGNTAVSWVRNLFHDC 73 (334)
Q Consensus 46 iVr~~v~~~~~~d~~~aa~llRL~FHDc 73 (334)
|.|+.+.+.++++|.+-...||+-+--.
T Consensus 24 iark~~~k~lk~NPpine~~iR~M~~qm 51 (71)
T COG3763 24 IARKQMKKQLKDNPPINEEMIRMMMAQM 51 (71)
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHh
Confidence 8999999999999999999999988754
No 23
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=29.28 E-value=57 Score=26.33 Aligned_cols=7 Identities=43% Similarity=0.420 Sum_probs=4.4
Q ss_pred CCchhhh
Q 045164 1 MATKRHH 7 (334)
Q Consensus 1 ~~~~~~~ 7 (334)
|+++..+
T Consensus 1 MaSK~~l 7 (95)
T PF07172_consen 1 MASKAFL 7 (95)
T ss_pred CchhHHH
Confidence 7866644
No 24
>PF06387 Calcyon: D1 dopamine receptor-interacting protein (calcyon); InterPro: IPR009431 This family consists of several D1 dopamine receptor-interacting (calcyon) proteins. D1/D5 dopamine receptors in the basal ganglia, hippocampus, and cerebral cortex modulate motor, reward, and cognitive behaviour. D1-like dopamine receptors likely modulate neocortical and hippocampal neuronal excitability and synaptic function via Ca2+ as well as cAMP-dependent signalling []. Defective calcyon proteins have been implicated in both attention-deficit/hyperactivity disorder (ADHD) [] and schizophrenia.; GO: 0050780 dopamine receptor binding, 0007212 dopamine receptor signaling pathway, 0016021 integral to membrane
Probab=24.13 E-value=72 Score=28.73 Aligned_cols=29 Identities=21% Similarity=0.442 Sum_probs=17.1
Q ss_pred cchhhccCccHHHHHHHHHHHHHHhCCChhhhHHHHHhc
Q 045164 33 FNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFH 71 (334)
Q Consensus 33 ~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FH 71 (334)
.=.|+.+||+.. ++ +.....|.-|-+.+-
T Consensus 106 a~wYDqsCPdGF-v~---------khk~C~P~~LemYY~ 134 (186)
T PF06387_consen 106 AIWYDQSCPDGF-VL---------KHKRCTPLTLEMYYT 134 (186)
T ss_pred eeeecccCCCcc-ee---------ecccccchhhhheec
Confidence 347888999875 22 244455555555544
No 25
>PLN00017 photosystem I reaction centre subunit VI; Provisional
Probab=21.37 E-value=47 Score=26.36 Aligned_cols=20 Identities=10% Similarity=0.107 Sum_probs=16.2
Q ss_pred hhhChHHHHHHHHHHHHHhh
Q 045164 288 MAADNGYFHQQFSRAVGLLS 307 (334)
Q Consensus 288 yA~d~~~F~~~Fa~Am~Km~ 307 (334)
|-..|++||+.|+..+.|=+
T Consensus 38 Y~~~QskFFe~~A~~~tkR~ 57 (90)
T PLN00017 38 YNPLQSKFFETFAAPFTKRG 57 (90)
T ss_pred CChHHHHHHHHHhhhhhHHH
Confidence 66678999999999887743
Done!