Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>045165
MADDQGTKPSIMEPKPPHPLHQIAETPTHKLLLKQWLKEEELILNRIALKETQIDSVRKE
ITQLYMFFFVFHSIALILLFNASSNDPVEKSCRRSWIPSLCTLLCSLGLIWAVRYKSDVE
SHLEKLLEREKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLRVEAKAVKKWSARD
FVTLFFFSVSCLVLALTRIILCN

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045165
        (203 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2090364 - symbol:AT3G12870 species:3702 "Arabi...   752  1.5e-74   1
TAIR|locus:2161830 - symbol:AT5G56120 "AT5G56120" species...   273  8.7e-24   1


>TAIR|locus:2090364 [details] [associations]
            symbol:AT3G12870 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009506 "plasmodesma"
            evidence=IDA] GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
            HOGENOM:HOG000240460 EMBL:AC023838 EMBL:BT030635 EMBL:AP000385
            IPI:IPI00537435 RefSeq:NP_187893.1 UniGene:At.39536 STRING:Q9LDH9
            EnsemblPlants:AT3G12870.1 GeneID:820470 KEGG:ath:AT3G12870
            TAIR:At3g12870 eggNOG:NOG327554 InParanoid:Q9LDH9 OMA:ACKRSWI
            PhylomeDB:Q9LDH9 ProtClustDB:CLSN2684636 Genevestigator:Q9LDH9
            Uniprot:Q9LDH9
        Length = 206

 Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
 Identities = 149/206 (72%), Positives = 169/206 (82%)

Query:     1 MADDQGTKPSIMEPKPPHPLHQIAETPTHXXXXXXXXXXXXXXXNRIALKETQIDSVRKE 60
             MA DQ T P IME K  HPLHQIA+TPTH               +R++ KE+QIDSVR+E
Sbjct:     1 MASDQSTNPPIMEAKTRHPLHQIADTPTHKLLLKQWLKEEELILSRVSHKESQIDSVRRE 60

Query:    61 ITQLYMFFFVFHSIALILLFNASSNDPVEKS---CRRSWIPSLCTLLCSLGLIWAVRYKS 117
             ITQLY+FFF+FHSI+L+LLF+ASS+     S   C+RSWIPSLC LL SLG+IWAVRYKS
Sbjct:    61 ITQLYIFFFLFHSISLLLLFHASSSSSSSASSSACKRSWIPSLCALLSSLGIIWAVRYKS 120

Query:   118 DVESHLEKLLEREKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLRVEAKAVKKWS 177
             +VESHLEKLLEREKED KLL KCVEELKKKG+EFDLLKEVDALRRAKSLRVE+K VKKWS
Sbjct:   121 EVESHLEKLLEREKEDAKLLRKCVEELKKKGIEFDLLKEVDALRRAKSLRVESKPVKKWS 180

Query:   178 ARDFVTLFFFSVSCLVLALTRIILCN 203
             ARDFVTLFFFSVSCLVLA+ R+ILC+
Sbjct:   181 ARDFVTLFFFSVSCLVLAMIRLILCD 206


>TAIR|locus:2161830 [details] [associations]
            symbol:AT5G56120 "AT5G56120" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:BT010876
            EMBL:AK176891 IPI:IPI00537262 RefSeq:NP_200423.2 UniGene:At.29405
            UniGene:At.29406 EnsemblPlants:AT5G56120.1 GeneID:835711
            KEGG:ath:AT5G56120 TAIR:At5g56120 eggNOG:NOG242247
            HOGENOM:HOG000240460 InParanoid:Q6NPP2 OMA:HVVEIPV PhylomeDB:Q6NPP2
            ProtClustDB:CLSN2680542 Genevestigator:Q6NPP2 Uniprot:Q6NPP2
        Length = 236

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 65/191 (34%), Positives = 105/191 (54%)

Query:    18 HPLHQIAETPTHXXXXXXXXXXXXXXXNRIALKETQIDSVRKEITQLYMFFFVFHSIALI 77
             HPL +I+E+P H                R+ LKE++++S+++EI QL  FF VFH     
Sbjct:    44 HPLSEISESPGHLLLLKLWQREEDLFCRRVLLKESRLESIKREIFQLCCFFLVFHGFFFT 103

Query:    78 LLFNASSNDPVE--KS---CRRSWIPSLCTLLCSLGLIWAVRYKSDVESHLEKLLEREKE 132
             L++++S +D  +  KS   C++ WIPS  +L  SL L++ V+ K  V   + + + RE+ 
Sbjct:   104 LVYSSSCSDDADVVKSNAVCKKWWIPSAVSLATSLVLVFLVQAKLFVFWKVYRGVNRERN 163

Query:   133 DGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLRVEAK-AVKKWSARDFVTLFFFSVSC 191
             D + L +CV EL+ KG  FDL KE  + +R KS  VE K     W ++  +T+     + 
Sbjct:   164 DNRTLTRCVLELRMKGSSFDLSKEPMSGKRMKSSSVEIKWKPVTWFSQYLITIVLLCSAG 223

Query:   192 LVLALTRIILC 202
             L   +++ ILC
Sbjct:   224 LFFPVSKFILC 234


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.136   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      203       188   0.00087  110 3  11 22  0.39    32
                                                     31  0.42    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  168 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.16u 0.16s 21.32t   Elapsed:  00:00:01
  Total cpu time:  21.16u 0.16s 21.32t   Elapsed:  00:00:01
  Start:  Sat May 11 04:28:33 2013   End:  Sat May 11 04:28:34 2013

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