BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045165
(203 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 108 GLIWAVRYKSDVESHLEKLLEREKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLR 167
G++ A+ K+ + +K+L D + C EEL+ GVE +V +++ S
Sbjct: 189 GILSALGSKTSLMIRHDKVLR--SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLS-G 245
Query: 168 VEAKAVKKWSARDFVTLFFFSVSCLVLALTRI 199
+E V R V V CL+ A+ R+
Sbjct: 246 LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 277
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 108 GLIWAVRYKSDVESHLEKLLEREKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLR 167
G++ A+ K+ + +K+L D + C EEL+ GVE +V +++ S
Sbjct: 187 GILSALGSKTSLMIRHDKVLR--SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLS-G 243
Query: 168 VEAKAVKKWSARDFVTLFFFSVSCLVLALTRI 199
+E V R V V CL+ A+ R+
Sbjct: 244 LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 275
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 108 GLIWAVRYKSDVESHLEKLLEREKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLR 167
G++ A+ K+ + +K+L D + C EEL+ GVE +V +++ S
Sbjct: 205 GILSALGSKTSLMIRHDKVLR--SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLS-G 261
Query: 168 VEAKAVKKWSARDFVTLFFFSVSCLVLALTRI 199
+E V R V V CL+ A+ R+
Sbjct: 262 LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 293
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 133 DGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLRVEAKAVKKWSARDFVTLFFFSVSCL 192
D + C EEL+ GVE +V +++ S +E V R V V CL
Sbjct: 210 DSMISTNCTEELENAGVEVLKFSQVKEVKKTLS-GLEVSMVTAVPGRLPVMTMIPDVDCL 268
Query: 193 VLALTRI 199
+ A+ R+
Sbjct: 269 LWAIGRV 275
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 108 GLIWAVRYKSDVESHLEKLLEREKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLR 167
G++ A+ K+ + +K+L D + C EEL+ GVE +V +++ S
Sbjct: 203 GILSALGSKTSLMIRHDKVLR--SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLS-G 259
Query: 168 VEAKAVKKWSARDFVTLFFFSVSCLVLALTRI 199
+E V R V V CL+ A+ R+
Sbjct: 260 LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 291
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 108 GLIWAVRYKSDVESHLEKLLEREKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLR 167
G++ A+ K+ + +K+L D + C EEL+ GVE +V +++ S
Sbjct: 204 GILSALGSKTSLMIRHDKVLR--SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLS-G 260
Query: 168 VEAKAVKKWSARDFVTLFFFSVSCLVLALTRI 199
+E V R V V CL+ A+ R+
Sbjct: 261 LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 133 DGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLRVEAKAVKKWSARDFVTLFFFSVSCL 192
D + C EEL+ GVE +V +++ S +E V R V V CL
Sbjct: 227 DSMISTNCTEELENAGVEVLKFSQVKEVKKTLS-GLEVSMVTAVPGRLPVMTMIPDVDCL 285
Query: 193 VLALTRI 199
+ A+ R+
Sbjct: 286 LWAIGRV 292
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 108 GLIWAVRYKSDVESHLEKLLEREKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLR 167
G++ A+ K+ + +K+L D + C EEL+ GVE +V +++ S
Sbjct: 204 GILSALGSKTSLMIRHDKVLR--SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLS-G 260
Query: 168 VEAKAVKKWSARDFVTLFFFSVSCLVLALTRI 199
+E V R V V CL+ A+ R+
Sbjct: 261 LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 108 GLIWAVRYKSDVESHLEKLLEREKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLR 167
G++ A+ K+ + +K+L D + C EEL+ GVE +V +++ S
Sbjct: 204 GILSALGSKTSLMIRHDKVLR--SFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLS-G 260
Query: 168 VEAKAVKKWSARDFVTLFFFSVSCLVLALTRI 199
+E V R V V CL+ A+ R+
Sbjct: 261 LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3KVG|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3L4I|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L4I|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L6Q|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
pdb|3L6Q|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
Length = 400
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 127 LEREKEDGKLLAKCVEELKKKGVEFDLLKEVDALRRAKSLRVEAKAVKK 175
L E D +L+ CV++ K+K DL ALRR LR + + K+
Sbjct: 244 LGGEDFDNRLVEFCVQDFKRKNRGMDLTTNARALRR---LRTQCERAKR 289
>pdb|4GGP|A Chain A, Crystal Structure Of Selenomethionine Containing
Trans-2-Enoyl-Coa Reductase From Treponema Denticola
pdb|4GGP|B Chain B, Crystal Structure Of Selenomethionine Containing
Trans-2-Enoyl-Coa Reductase From Treponema Denticola
pdb|4GGP|C Chain C, Crystal Structure Of Selenomethionine Containing
Trans-2-Enoyl-Coa Reductase From Treponema Denticola
pdb|4GGP|D Chain D, Crystal Structure Of Selenomethionine Containing
Trans-2-Enoyl-Coa Reductase From Treponema Denticola
Length = 401
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 17/20 (85%)
Query: 135 KLLAKCVEELKKKGVEFDLL 154
++ A+ +EE KKKG++FDL+
Sbjct: 125 EIKAQVIEEAKKKGIKFDLI 144
>pdb|4GGO|A Chain A, Crystal Structure Of Trans-2-Enoyl-Coa Reductase From
Treponema Denticola
pdb|4GGO|B Chain B, Crystal Structure Of Trans-2-Enoyl-Coa Reductase From
Treponema Denticola
pdb|4GGO|C Chain C, Crystal Structure Of Trans-2-Enoyl-Coa Reductase From
Treponema Denticola
pdb|4GGO|D Chain D, Crystal Structure Of Trans-2-Enoyl-Coa Reductase From
Treponema Denticola
Length = 401
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 17/20 (85%)
Query: 135 KLLAKCVEELKKKGVEFDLL 154
++ A+ +EE KKKG++FDL+
Sbjct: 125 EIKAQVIEEAKKKGIKFDLI 144
>pdb|4FBG|A Chain A, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|B Chain B, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|C Chain C, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|D Chain D, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|E Chain E, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|F Chain F, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|G Chain G, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|H Chain H, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|I Chain I, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|J Chain J, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|K Chain K, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|L Chain L, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|M Chain M, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|N Chain N, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|O Chain O, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
pdb|4FBG|P Chain P, Crystal Structure Of Treponema Denticola Trans-2-Enoyl-Coa
Reductase In Complex With Nad
Length = 405
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 17/20 (85%)
Query: 135 KLLAKCVEELKKKGVEFDLL 154
++ A+ +EE KKKG++FDL+
Sbjct: 121 EIKAQVIEEAKKKGIKFDLI 140
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,309,053
Number of Sequences: 62578
Number of extensions: 179107
Number of successful extensions: 483
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 468
Number of HSP's gapped (non-prelim): 31
length of query: 203
length of database: 14,973,337
effective HSP length: 94
effective length of query: 109
effective length of database: 9,091,005
effective search space: 990919545
effective search space used: 990919545
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 49 (23.5 bits)