Query 045166
Match_columns 305
No_of_seqs 422 out of 3799
Neff 9.8
Searched_HMMs 13730
Date Mon Mar 25 18:29:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045166.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045166hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 4.8E-30 3.5E-34 222.1 14.9 227 2-233 54-312 (313)
2 d1p9ag_ c.10.2.7 (G:) von Will 99.9 3.5E-23 2.6E-27 174.5 16.1 191 2-229 14-213 (266)
3 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 9.4E-24 6.9E-28 182.1 11.0 201 1-205 79-310 (313)
4 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 1.6E-22 1.1E-26 172.0 13.4 215 3-229 16-243 (284)
5 d1p9ag_ c.10.2.7 (G:) von Will 99.8 1.1E-20 8.2E-25 159.0 14.1 169 1-202 34-209 (266)
6 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.8 8E-20 5.8E-24 146.1 8.5 180 2-233 12-192 (192)
7 d1xkua_ c.10.2.7 (A:) Decorin 99.8 2.9E-18 2.1E-22 146.7 17.7 58 2-59 35-92 (305)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.8 2.6E-19 1.9E-23 151.9 9.2 194 1-205 35-242 (284)
9 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 1.2E-18 8.9E-23 139.1 7.7 106 1-109 32-138 (192)
10 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 9.7E-17 7.1E-21 129.7 12.4 161 21-217 45-206 (210)
11 d2omxa2 c.10.2.1 (A:37-235) In 99.7 2.5E-16 1.8E-20 126.2 12.8 155 5-202 25-186 (199)
12 d1xkua_ c.10.2.7 (A:) Decorin 99.7 5.2E-16 3.8E-20 132.4 14.5 211 2-222 14-253 (305)
13 d1dcea3 c.10.2.2 (A:444-567) R 99.6 3.8E-16 2.8E-20 115.2 9.4 102 1-110 1-103 (124)
14 d2omza2 c.10.2.1 (A:33-416) In 99.6 2.4E-15 1.7E-19 131.9 13.4 71 147-221 306-383 (384)
15 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.6 4.2E-15 3.1E-19 122.4 13.6 195 1-206 11-218 (242)
16 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 5.6E-15 4.1E-19 119.2 11.8 160 1-197 49-209 (210)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.6 5.2E-15 3.8E-19 118.3 11.5 160 22-222 18-183 (199)
18 d1a9na_ c.10.2.4 (A:) Spliceso 99.6 3E-15 2.2E-19 115.6 9.3 133 17-194 13-145 (162)
19 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 1.3E-14 9.2E-19 118.4 12.8 190 4-216 25-222 (227)
20 d1dcea3 c.10.2.2 (A:444-567) R 99.5 1E-14 7.6E-19 107.4 9.2 59 25-89 1-59 (124)
21 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 2.5E-15 1.8E-19 116.1 5.9 103 1-109 21-124 (162)
22 d2omza2 c.10.2.1 (A:33-416) In 99.5 6E-14 4.4E-18 122.8 13.5 176 1-199 200-384 (384)
23 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 3.7E-14 2.7E-18 115.6 10.1 184 21-222 18-206 (227)
24 d1jl5a_ c.10.2.6 (A:) Leucine 99.4 1.8E-12 1.3E-16 111.7 14.9 91 1-108 41-131 (353)
25 d2ifga3 c.10.2.7 (A:36-191) Hi 99.4 3.6E-13 2.6E-17 103.1 8.4 102 2-108 12-114 (156)
26 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.3 2.4E-12 1.7E-16 105.5 11.0 77 25-106 11-87 (242)
27 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 1.7E-14 1.2E-18 115.2 -2.7 44 147-205 114-157 (198)
28 d2ifga3 c.10.2.7 (A:36-191) Hi 99.3 3.1E-12 2.2E-16 97.7 10.4 72 19-94 5-77 (156)
29 d1jl5a_ c.10.2.6 (A:) Leucine 99.3 2.7E-11 2E-15 104.0 16.1 73 1-85 61-133 (353)
30 d2astb2 c.10.1.3 (B:2136-2419) 99.2 1.1E-12 8.2E-17 110.4 3.7 176 20-198 44-235 (284)
31 d2astb2 c.10.1.3 (B:2136-2419) 99.1 9.5E-12 6.9E-16 104.6 2.6 212 1-221 3-235 (284)
32 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 1E-12 7.6E-17 104.5 -4.5 88 13-108 39-126 (198)
33 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.7 2.7E-09 2E-13 91.6 1.9 165 1-202 124-316 (344)
34 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.6 1.7E-09 1.3E-13 92.8 0.4 108 1-108 62-197 (344)
35 d1koha1 c.10.2.3 (A:201-362) m 98.4 5.1E-09 3.7E-13 79.9 -2.4 84 18-103 61-152 (162)
36 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.3 3.4E-08 2.4E-12 87.1 0.4 84 1-85 5-97 (460)
37 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.3 7.6E-08 5.6E-12 84.7 1.7 83 1-85 30-125 (460)
38 d1koha1 c.10.2.3 (A:201-362) m 98.2 9.7E-08 7.1E-12 72.6 0.6 75 1-78 68-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.5 1.2E-05 8.8E-10 60.9 2.0 67 19-85 12-85 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.4 5.3E-05 3.8E-09 57.2 3.9 103 1-106 18-140 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 96.9 6.4E-05 4.7E-09 56.5 0.0 72 14-85 9-87 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 95.5 0.0011 8.3E-08 49.3 -0.0 103 1-106 20-141 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.96 E-value=4.8e-30 Score=222.09 Aligned_cols=227 Identities=26% Similarity=0.350 Sum_probs=177.1
Q ss_pred EEEcccCcccc--ccChhhhcCCCCCEEeccC-cccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEe
Q 045166 2 FYLRNENTFLQ--RIPRSLINCSKLEFLGLGI-NQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIID 78 (305)
Q Consensus 2 ~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~ 78 (305)
.|||++|.++| .+|++++++++|++|+|++ |+++|.+|..|+++++|++|+|++|++.+..+..+ ..+.+|++++
T Consensus 54 ~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~--~~~~~L~~l~ 131 (313)
T d1ogqa_ 54 NLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL--SQIKTLVTLD 131 (313)
T ss_dssp EEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGG--GGCTTCCEEE
T ss_pred EEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccc--cchhhhcccc
Confidence 58999999997 5899999999999999986 89999999999999999999999999999887777 7889999999
Q ss_pred CCCCcccccCChhhhhCcccchhccCcccccccccccCCCCcCCCcc------------------cccccccccccc---
Q 045166 79 LSDNRFTGKLPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVL------------------GTYDYSRTMNSK--- 137 (305)
Q Consensus 79 Ls~N~l~g~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~--- 137 (305)
+++|.+.+.+|.. +..++.++.+++++|...+..+........... ...........+
T Consensus 132 l~~N~~~~~~p~~-l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~ 210 (313)
T d1ogqa_ 132 FSYNALSGTLPPS-ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLE 210 (313)
T ss_dssp CCSSEEESCCCGG-GGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEE
T ss_pred cccccccccCchh-hccCcccceeeccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999888866 889999999999886544322211111111100 000001111111
Q ss_pred CcccccccccccccEEEccCCccccccchhhcCCCCce--------eeecCCccccCCCCCCEEeccCCcceecCCCCCC
Q 045166 138 GRVMTYNKIPNILAGIILSNNRFDGAIPASIANLKGLQ--------FSGRIPQQLAELTFLAFFNVSDNYLTGPIPQGKQ 209 (305)
Q Consensus 138 ~~~~~~~~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~--------l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~~~ 209 (305)
+........+++++.+++++|.+++.+| .++.+++|+ ++|.+|++++++++|++|||++|+|+|.+|+...
T Consensus 211 ~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~ 289 (313)
T d1ogqa_ 211 GDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN 289 (313)
T ss_dssp ECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTT
T ss_pred cccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCccc
Confidence 1122333446789999999999997665 566655554 7889999999999999999999999999999888
Q ss_pred CCccCCCccCCCCCCCCcCCCCCC
Q 045166 210 FATFDNTSFDGNSGLCGKPLSKGC 233 (305)
Q Consensus 210 ~~~l~~~~~~gNp~lc~~~~~~~c 233 (305)
+.+++..++.||+.+||.|+. .|
T Consensus 290 L~~L~~l~l~~N~~l~g~plp-~c 312 (313)
T d1ogqa_ 290 LQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp GGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CCCCCHHHhCCCccccCCCCC-CC
Confidence 899999999999999998874 55
No 2
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=3.5e-23 Score=174.50 Aligned_cols=191 Identities=19% Similarity=0.164 Sum_probs=139.5
Q ss_pred EEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCC
Q 045166 2 FYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSD 81 (305)
Q Consensus 2 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~ 81 (305)
..|.++++++ .+|+.+. +++++|+|++|+|++..+..|.++++|++|+|++|+++. +|. + +.+++|++|++++
T Consensus 14 ~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~~-~--~~l~~L~~L~Ls~ 86 (266)
T d1p9ag_ 14 EVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQV-D--GTLPVLGTLDLSH 86 (266)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EEC-C--SCCTTCCEEECCS
T ss_pred EEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-ccc-c--ccccccccccccc
Confidence 4688899998 6787664 589999999999998555678999999999999999985 443 4 6789999999999
Q ss_pred CcccccCChhhhhCcccchhccCcccccccccccCCCCcCCCccccccccccccccCcccccccccccccEEEccCCccc
Q 045166 82 NRFTGKLPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNSKGRVMTYNKIPNILAGIILSNNRFD 161 (305)
Q Consensus 82 N~l~g~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~LdLs~N~l~ 161 (305)
|+++ ..+.. +..+++|+.|+++++....... .....+.+++.|++++|.++
T Consensus 87 N~l~-~~~~~-~~~l~~L~~L~l~~~~~~~~~~---------------------------~~~~~l~~l~~L~l~~n~l~ 137 (266)
T d1p9ag_ 87 NQLQ-SLPLL-GQTLPALTVLDVSFNRLTSLPL---------------------------GALRGLGELQELYLKGNELK 137 (266)
T ss_dssp SCCS-SCCCC-TTTCTTCCEEECCSSCCCCCCS---------------------------STTTTCTTCCEEECTTSCCC
T ss_pred cccc-ccccc-cccccccccccccccccceeec---------------------------cccccccccccccccccccc
Confidence 9998 55644 8889999999998754322111 11112444555555555555
Q ss_pred cccchhhcCCCCce--------eeecCCccccCCCCCCEEeccCCcceecCCCC-CCCCccCCCccCCCCCCCCcCC
Q 045166 162 GAIPASIANLKGLQ--------FSGRIPQQLAELTFLAFFNVSDNYLTGPIPQG-KQFATFDNTSFDGNSGLCGKPL 229 (305)
Q Consensus 162 g~~p~~~~~L~~L~--------l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~-~~~~~l~~~~~~gNp~lc~~~~ 229 (305)
+..+..+..+..++ +++..+..|..+++|++|||++|+|+ .+|+. .....+..+.++|||+.|+|..
T Consensus 138 ~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~CdC~~ 213 (266)
T d1p9ag_ 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (266)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred eeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCCCcch
Confidence 33333334333333 33444566788999999999999999 67764 4567788889999999998743
No 3
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.89 E-value=9.4e-24 Score=182.14 Aligned_cols=201 Identities=21% Similarity=0.342 Sum_probs=153.6
Q ss_pred CEEEccc-CccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeC
Q 045166 1 MFYLRNE-NTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDL 79 (305)
Q Consensus 1 ~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~L 79 (305)
++|||++ |+++|.+|++|+++++|++|+|++|++.+..|..+..+.+|+++++++|.+.+.+|..+ ++++.++++++
T Consensus 79 ~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l--~~l~~L~~l~l 156 (313)
T d1ogqa_ 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI--SSLPNLVGITF 156 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGG--GGCTTCCEEEC
T ss_pred cccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhh--ccCcccceeec
Confidence 5799996 89999999999999999999999999999888889999999999999999999999888 89999999999
Q ss_pred CCCcccccCChhhhhCcccc-hhccCcccccccccccCCC----------------CcCCCcccc-ccccccccccCccc
Q 045166 80 SDNRFTGKLPSNSFLCWNAM-KIVNTSALRYLQDVLFPYG----------------QVSSNVLGT-YDYSRTMNSKGRVM 141 (305)
Q Consensus 80 s~N~l~g~lp~~~~~~l~~L-~~L~l~~~~~~~~~~~~~~----------------~~~~~~~~~-~~~~~~~~~~~~~~ 141 (305)
++|.+.|.+|.. +..+..+ +.++++.|+..+......+ .++...... .+.......+.+..
T Consensus 157 ~~n~l~~~ip~~-~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~ 235 (313)
T d1ogqa_ 157 DGNRISGAIPDS-YGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CSSCCEEECCGG-GGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred cccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999976 6666665 6677776544322111111 111111110 11112222222222
Q ss_pred c--cccccccccEEEccCCccccccchhhcCCCCce--------eeecCCccccCCCCCCEEeccCCc-ceec-CC
Q 045166 142 T--YNKIPNILAGIILSNNRFDGAIPASIANLKGLQ--------FSGRIPQQLAELTFLAFFNVSDNY-LTGP-IP 205 (305)
Q Consensus 142 ~--~~~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~--------l~g~ip~~l~~l~~L~~L~Ls~N~-l~g~-ip 205 (305)
. ....+++|+.|||++|+|+|.+|.+++++++|+ ++|.+|+ ++++++|+.+++++|+ +.|. +|
T Consensus 236 ~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~l~g~plp 310 (313)
T d1ogqa_ 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp BGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSEEESTTSS
T ss_pred cccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCccccCCCCC
Confidence 2 233478899999999999999999999988887 7889985 6889999999999998 5664 44
No 4
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.6e-22 Score=172.05 Aligned_cols=215 Identities=14% Similarity=0.119 Sum_probs=128.9
Q ss_pred EEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCC-C
Q 045166 3 YLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLS-D 81 (305)
Q Consensus 3 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls-~ 81 (305)
++.++++++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|++++|++....+..+ ..++.+..++.+ .
T Consensus 16 v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~--~~~~~~~~l~~~~~ 90 (284)
T d1ozna_ 16 TSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAF--TGLALLEQLDLSDN 90 (284)
T ss_dssp EECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTT--TTCTTCCEEECCSC
T ss_pred EEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccc--cccccccccccccc
Confidence 344555555 4454332 445666666666655333445566666666666666655444444 445555555543 3
Q ss_pred CcccccCChhhhhCcccchhccCcccccccccccCCCCcCCCccccccccccccc---cCcccccccccccccEEEccCC
Q 045166 82 NRFTGKLPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNS---KGRVMTYNKIPNILAGIILSNN 158 (305)
Q Consensus 82 N~l~g~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L~~LdLs~N 158 (305)
|.++ .++...|.++++|++|++++|............ .. .+..+.+.. ..+....+..+++|+.|++++|
T Consensus 91 ~~~~-~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~-~~-----~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N 163 (284)
T d1ozna_ 91 AQLR-SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRG-LA-----ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163 (284)
T ss_dssp TTCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CT-----TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cccc-cccchhhcccccCCEEecCCcccccccccccch-hc-----ccchhhhccccccccChhHhccccchhhcccccC
Confidence 3333 444444555566666655554321111000000 00 011111111 1222333445778999999999
Q ss_pred ccccccchhhcCCCCce--------eeecCCccccCCCCCCEEeccCCcceecCCCC-CCCCccCCCccCCCCCCCCcCC
Q 045166 159 RFDGAIPASIANLKGLQ--------FSGRIPQQLAELTFLAFFNVSDNYLTGPIPQG-KQFATFDNTSFDGNSGLCGKPL 229 (305)
Q Consensus 159 ~l~g~~p~~~~~L~~L~--------l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~-~~~~~l~~~~~~gNp~lc~~~~ 229 (305)
++++..|..+.++++|+ +++..|..|..+++|++||+++|++++..|.. .....+..++++|||+.|+|+.
T Consensus 164 ~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~~ 243 (284)
T d1ozna_ 164 RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (284)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred cccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCccc
Confidence 99977778888888876 66778899999999999999999999766643 3566788889999999998764
No 5
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.1e-20 Score=158.96 Aligned_cols=169 Identities=20% Similarity=0.200 Sum_probs=129.7
Q ss_pred CEEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCC
Q 045166 1 MFYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLS 80 (305)
Q Consensus 1 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls 80 (305)
++|||++|+|++..+.+|.++++|++|+|++|+|+. +| .++.+++|++|+|++|++++ .+..+ ..+++|++|+++
T Consensus 34 ~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls~N~l~~-~~~~~--~~l~~L~~L~l~ 108 (266)
T d1p9ag_ 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLSHNQLQS-LPLLG--QTLPALTVLDVS 108 (266)
T ss_dssp CEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECCSSCCSS-CCCCT--TTCTTCCEEECC
T ss_pred CEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-cccccccccccccccccccc-ccccc--cccccccccccc
Confidence 579999999997777889999999999999999986 55 36789999999999999986 46666 789999999999
Q ss_pred CCcccccCChhhhhCcccchhccCcccccccccccCCCCcCCCccccccccccccccCcccccccccccccEEEccCCcc
Q 045166 81 DNRFTGKLPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNSKGRVMTYNKIPNILAGIILSNNRF 160 (305)
Q Consensus 81 ~N~l~g~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~LdLs~N~l 160 (305)
+|.+. .++...+..+.+++.|++++|..... + ......+++++.+++++|++
T Consensus 109 ~~~~~-~~~~~~~~~l~~l~~L~l~~n~l~~l--------~-------------------~~~~~~l~~l~~l~l~~N~l 160 (266)
T d1p9ag_ 109 FNRLT-SLPLGALRGLGELQELYLKGNELKTL--------P-------------------PGLLTPTPKLEKLSLANNNL 160 (266)
T ss_dssp SSCCC-CCCSSTTTTCTTCCEEECTTSCCCCC--------C-------------------TTTTTTCTTCCEEECTTSCC
T ss_pred ccccc-eeecccccccccccccccccccccee--------c-------------------cccccccccchhcccccccc
Confidence 99998 66666688899999999988543221 1 11122245566666666666
Q ss_pred ccccchhhcCCCCce---eee----cCCccccCCCCCCEEeccCCccee
Q 045166 161 DGAIPASIANLKGLQ---FSG----RIPQQLAELTFLAFFNVSDNYLTG 202 (305)
Q Consensus 161 ~g~~p~~~~~L~~L~---l~g----~ip~~l~~l~~L~~L~Ls~N~l~g 202 (305)
++..+..+..+++|+ +++ .+|+.+..+++|+.|+|++|++..
T Consensus 161 ~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 161 TELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209 (266)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cccCccccccccccceeecccCCCcccChhHCCCCCCCEEEecCCCCCC
Confidence 655555555555444 221 567777889999999999999875
No 6
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.79 E-value=8e-20 Score=146.14 Aligned_cols=180 Identities=19% Similarity=0.219 Sum_probs=123.8
Q ss_pred EEEcccCccccccChhhhcCCCCCEEeccCcccccCc-chhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCC
Q 045166 2 FYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTF-PSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLS 80 (305)
Q Consensus 2 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls 80 (305)
++|.++|+++ .+|..+. +++++|+|++|+|++.+ +..|..+++|++|+|++|.+....+..+ ..+++|++|+|+
T Consensus 12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~--~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAF--EGASHIQELQLG 86 (192)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTT--TTCTTCCEEECC
T ss_pred EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccccc--ccccccceeeec
Confidence 5789999998 7787653 78999999999998644 5567899999999999999998888877 889999999999
Q ss_pred CCcccccCChhhhhCcccchhccCcccccccccccCCCCcCCCccccccccccccccCcccccccccccccEEEccCCcc
Q 045166 81 DNRFTGKLPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNSKGRVMTYNKIPNILAGIILSNNRF 160 (305)
Q Consensus 81 ~N~l~g~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~LdLs~N~l 160 (305)
+|+++ .+|.+.|.++++|++|++++|.... +....+..+++|++|+|++|.+
T Consensus 87 ~N~l~-~l~~~~F~~l~~L~~L~L~~N~l~~---------------------------i~~~~f~~l~~L~~l~L~~N~~ 138 (192)
T d1w8aa_ 87 ENKIK-EISNKMFLGLHQLKTLNLYDNQISC---------------------------VMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp SCCCC-EECSSSSTTCTTCCEEECCSSCCCE---------------------------ECTTSSTTCTTCCEEECTTCCB
T ss_pred ccccc-ccCHHHHhCCCcccccccCCccccc---------------------------cCHHHhcCCccccccccccccc
Confidence 99999 6776778888888888888754322 1112223366788888888877
Q ss_pred ccccchhhcCCCCceeeecCCccccCCCCCCEEeccCCcceecCCCCCCCCccCCCccCCCCCCCCcCCCCCC
Q 045166 161 DGAIPASIANLKGLQFSGRIPQQLAELTFLAFFNVSDNYLTGPIPQGKQFATFDNTSFDGNSGLCGKPLSKGC 233 (305)
Q Consensus 161 ~g~~p~~~~~L~~L~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~l~~~~~~gNp~lc~~~~~~~c 233 (305)
....+... +. ..++.+.+..|.+++..|. .+......++..|...|.++....|
T Consensus 139 ~~~~~~~~---------------~~--~~l~~~~l~~~~~~c~~p~--~l~~~~l~~L~~n~l~C~~~~~~g~ 192 (192)
T d1w8aa_ 139 NCNCHLAW---------------FA--EWLRKKSLNGGAARCGAPS--KVRDVQIKDLPHSEFKCSSENSEGC 192 (192)
T ss_dssp CCSGGGHH---------------HH--HHHHHHCCSGGGCBBCSST--TTTTSBGGGSCTTTCCCCCC---CC
T ss_pred ccccchHH---------------Hh--hhhhhhcccCCCeEeCCCh--hhcCCEeeecCHhhCcCCCCCCCCC
Confidence 64332111 00 1133344556666665554 3344444556667666765544443
No 7
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.78 E-value=2.9e-18 Score=146.67 Aligned_cols=58 Identities=26% Similarity=0.182 Sum_probs=27.3
Q ss_pred EEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccce
Q 045166 2 FYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFY 59 (305)
Q Consensus 2 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 59 (305)
+|||++|+|+...+.+|.++++|++|++++|.+....|..|..+++|++|++++|+++
T Consensus 35 ~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~ 92 (305)
T d1xkua_ 35 LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 92 (305)
T ss_dssp EEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS
T ss_pred EEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccC
Confidence 4445555544322234444555555555555544433444444555555555555444
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=2.6e-19 Score=151.85 Aligned_cols=194 Identities=16% Similarity=0.138 Sum_probs=138.2
Q ss_pred CEEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcc-cccceeeeCCCCCCCCCCCccEEeC
Q 045166 1 MFYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILR-SNIFYGIIEEPRTSCGFSKLRIIDL 79 (305)
Q Consensus 1 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~-~N~l~~~~p~~~~~~~l~~L~~L~L 79 (305)
++|||++|+|++..+.+|.++++|++|++++|.+....+..+..+..++.++.. .|.++...|..+ .++++|++|++
T Consensus 35 ~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~--~~l~~L~~L~l 112 (284)
T d1ozna_ 35 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATF--HGLGRLHTLHL 112 (284)
T ss_dssp SEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTT--TTCTTCCEEEC
T ss_pred CEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhh--cccccCCEEec
Confidence 579999999997667789999999999999999987666666677777777654 455555445555 67777777777
Q ss_pred CCCcccccCChhhhhCcccchhccCcccccccccccCCCCcCCCcccc--ccccccccccC---cccccccccccccEEE
Q 045166 80 SDNRFTGKLPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVLGT--YDYSRTMNSKG---RVMTYNKIPNILAGII 154 (305)
Q Consensus 80 s~N~l~g~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~L~~Ld 154 (305)
++|.+. .++...+....+|+.+++++|.... ++...+.. .+..+++..+. +....+..+++|+.++
T Consensus 113 ~~n~~~-~~~~~~~~~~~~L~~l~l~~N~l~~--------i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~ 183 (284)
T d1ozna_ 113 DRCGLQ-ELGPGLFRGLAALQYLYLQDNALQA--------LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (284)
T ss_dssp TTSCCC-CCCTTTTTTCTTCCEEECCSSCCCC--------CCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCcccc-cccccccchhcccchhhhccccccc--------cChhHhccccchhhcccccCcccccchhhhccccccchhh
Confidence 777776 4444456677777777777653321 11111110 12222233322 2334455688999999
Q ss_pred ccCCccccccchhhcCCCCce--------eeecCCccccCCCCCCEEeccCCcceecCC
Q 045166 155 LSNNRFDGAIPASIANLKGLQ--------FSGRIPQQLAELTFLAFFNVSDNYLTGPIP 205 (305)
Q Consensus 155 Ls~N~l~g~~p~~~~~L~~L~--------l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip 205 (305)
+++|++++..|..|..+++|+ +.+..|..|..+++|++|++++|++.+..+
T Consensus 184 l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (284)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred hhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCcc
Confidence 999999988899998888776 555667789999999999999999997654
No 9
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.74 E-value=1.2e-18 Score=139.13 Aligned_cols=106 Identities=21% Similarity=0.205 Sum_probs=96.0
Q ss_pred CEEEcccCcccccc-ChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeC
Q 045166 1 MFYLRNENTFLQRI-PRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDL 79 (305)
Q Consensus 1 ~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~L 79 (305)
++|+|++|+|++.+ +..|.++++|+.|++++|.+.+..+..+..+++|++|+|++|+++...|..| .++++|++|+|
T Consensus 32 ~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F--~~l~~L~~L~L 109 (192)
T d1w8aa_ 32 TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMF--LGLHQLKTLNL 109 (192)
T ss_dssp SEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSS--TTCTTCCEEEC
T ss_pred CEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHH--hCCCccccccc
Confidence 47999999998644 6678999999999999999999888899999999999999999998777778 89999999999
Q ss_pred CCCcccccCChhhhhCcccchhccCccccc
Q 045166 80 SDNRFTGKLPSNSFLCWNAMKIVNTSALRY 109 (305)
Q Consensus 80 s~N~l~g~lp~~~~~~l~~L~~L~l~~~~~ 109 (305)
++|+|+ .+|.+.|..+++|+++++++|.+
T Consensus 110 ~~N~l~-~i~~~~f~~l~~L~~l~L~~N~~ 138 (192)
T d1w8aa_ 110 YDNQIS-CVMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp CSSCCC-EECTTSSTTCTTCCEEECTTCCB
T ss_pred CCcccc-ccCHHHhcCCccccccccccccc
Confidence 999999 77777799999999999998643
No 10
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=9.7e-17 Score=129.74 Aligned_cols=161 Identities=17% Similarity=0.137 Sum_probs=77.1
Q ss_pred CCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCCCcccccCChhhhhCcccch
Q 045166 21 CSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSDNRFTGKLPSNSFLCWNAMK 100 (305)
Q Consensus 21 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~ 100 (305)
+.+|+.|++++|.++. ++ .+..+++|++|++++|++++.. .+ +.+++|++|++++|+++ .+| . +..+++|+
T Consensus 45 L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~l~--~~--~~l~~L~~L~l~~n~i~-~l~-~-l~~l~~L~ 115 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIK--PL--ANLKNLGWLFLDENKVK-DLS-S-LKDLKKLK 115 (210)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG--GG--TTCTTCCEEECCSSCCC-CGG-G-GTTCTTCC
T ss_pred hcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccCcc--cc--ccCcccccccccccccc-ccc-c-cccccccc
Confidence 4455555555555554 22 2445555555555555555422 23 44555555555555555 344 2 45555555
Q ss_pred hccCcccccccccccCCCCcCCCccccccccccccccCcc-cccccccccccEEEccCCccccccchhhcCCCCceeeec
Q 045166 101 IVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNSKGRV-MTYNKIPNILAGIILSNNRFDGAIPASIANLKGLQFSGR 179 (305)
Q Consensus 101 ~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~l~g~ 179 (305)
.|+++++....... ...++ .+.......+.+. ......+++|+.+++++|++++ +
T Consensus 116 ~L~l~~~~~~~~~~--l~~l~------~l~~l~~~~n~l~~~~~~~~l~~L~~l~l~~n~l~~-i--------------- 171 (210)
T d1h6ta2 116 SLSLEHNGISDING--LVHLP------QLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISD-I--------------- 171 (210)
T ss_dssp EEECTTSCCCCCGG--GGGCT------TCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCC-C---------------
T ss_pred cccccccccccccc--ccccc------cccccccccccccccccccccccccccccccccccc-c---------------
Confidence 55555432111000 00000 0000000000000 0112235667777777777762 2
Q ss_pred CCccccCCCCCCEEeccCCcceecCCCCCCCCccCCCc
Q 045166 180 IPQQLAELTFLAFFNVSDNYLTGPIPQGKQFATFDNTS 217 (305)
Q Consensus 180 ip~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~l~~~~ 217 (305)
+ .++++++|+.|++++|+++ .+|....+.+++.++
T Consensus 172 -~-~l~~l~~L~~L~Ls~N~i~-~l~~l~~l~~L~~L~ 206 (210)
T d1h6ta2 172 -V-PLAGLTKLQNLYLSKNHIS-DLRALAGLKNLDVLE 206 (210)
T ss_dssp -G-GGTTCTTCCEEECCSSCCC-BCGGGTTCTTCSEEE
T ss_pred -c-cccCCCCCCEEECCCCCCC-CChhhcCCCCCCEEE
Confidence 2 2577888999999999887 455444444444443
No 11
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67 E-value=2.5e-16 Score=126.23 Aligned_cols=155 Identities=18% Similarity=0.179 Sum_probs=82.5
Q ss_pred cccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCCCcc
Q 045166 5 RNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSDNRF 84 (305)
Q Consensus 5 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l 84 (305)
++.+.+++.++ ...+.++++|++++|.++. ++ .+..+++|++|++++|++++..| + +++++|++|++++|.+
T Consensus 25 l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~~~~--l--~~l~~L~~L~l~~n~~ 96 (199)
T d2omxa2 25 LGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--L--KNLTKLVDILMNNNQI 96 (199)
T ss_dssp TTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--G--TTCTTCCEEECCSSCC
T ss_pred hCCCCCCCccC--HHHhcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccCccc--c--cCCccccccccccccc
Confidence 34445544332 2345666666666666654 32 35566666666666666665322 4 5666666666666666
Q ss_pred cccCChhhhhCcccchhccCcccccccccccCCCCcCCCccccccccccccccCcccccccccccccEEEccCCcccccc
Q 045166 85 TGKLPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNSKGRVMTYNKIPNILAGIILSNNRFDGAI 164 (305)
Q Consensus 85 ~g~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~LdLs~N~l~g~~ 164 (305)
. .++. +.+++.|+.++++++...... ....+++|+.|++++|++. .+
T Consensus 97 ~-~~~~--l~~l~~L~~L~l~~~~~~~~~-----------------------------~~~~l~~L~~L~l~~n~l~-~~ 143 (199)
T d2omxa2 97 A-DITP--LANLTNLTGLTLFNNQITDID-----------------------------PLKNLTNLNRLELSSNTIS-DI 143 (199)
T ss_dssp C-CCGG--GTTCTTCSEEECCSSCCCCCG-----------------------------GGTTCTTCSEEECCSSCCC-CC
T ss_pred c-cccc--ccccccccccccccccccccc-----------------------------ccchhhhhHHhhhhhhhhc-cc
Confidence 5 4542 556666666666553221100 0111444555555555554 22
Q ss_pred chhhcCCCCce---eee----cCCccccCCCCCCEEeccCCccee
Q 045166 165 PASIANLKGLQ---FSG----RIPQQLAELTFLAFFNVSDNYLTG 202 (305)
Q Consensus 165 p~~~~~L~~L~---l~g----~ip~~l~~l~~L~~L~Ls~N~l~g 202 (305)
| .+..+++|+ +.+ .+ +.++++++|++|++++|+++.
T Consensus 144 ~-~l~~~~~L~~L~l~~n~l~~l-~~l~~l~~L~~L~ls~N~i~~ 186 (199)
T d2omxa2 144 S-ALSGLTSLQQLNFSSNQVTDL-KPLANLTTLERLDISSNKVSD 186 (199)
T ss_dssp G-GGTTCTTCSEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCC
T ss_pred c-cccccccccccccccccccCC-ccccCCCCCCEEECCCCCCCC
Confidence 2 222222222 111 12 236778888888888888874
No 12
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.66 E-value=5.2e-16 Score=132.45 Aligned_cols=211 Identities=19% Similarity=0.213 Sum_probs=146.5
Q ss_pred EEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCC
Q 045166 2 FYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSD 81 (305)
Q Consensus 2 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~ 81 (305)
++|-++++++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|++++|.+....|..| ..+++|++|++++
T Consensus 14 ~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f--~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 14 VVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAF--APLVKLERLYLSK 88 (305)
T ss_dssp EEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTT--TTCTTCCEEECCS
T ss_pred EEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhh--hCCCccCEecccC
Confidence 5778888888 6777663 789999999999998444579999999999999999998777778 8999999999999
Q ss_pred CcccccCChhhhhCcccchhccCccccccccc--ccCC---------CCcC--------CCcccc-ccccccccccCccc
Q 045166 82 NRFTGKLPSNSFLCWNAMKIVNTSALRYLQDV--LFPY---------GQVS--------SNVLGT-YDYSRTMNSKGRVM 141 (305)
Q Consensus 82 N~l~g~lp~~~~~~l~~L~~L~l~~~~~~~~~--~~~~---------~~~~--------~~~~~~-~~~~~~~~~~~~~~ 141 (305)
|+++ .+|...+ ..+..|.+..|...... .+.. ...+ ..+... .+.......+.+..
T Consensus 89 n~l~-~l~~~~~---~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~ 164 (305)
T d1xkua_ 89 NQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 164 (305)
T ss_dssp SCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CccC-cCccchh---hhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc
Confidence 9999 7886533 34455554443211100 0000 0000 000000 01112222222222
Q ss_pred ccccccccccEEEccCCccccccchhhcCCCCce--------eeecCCccccCCCCCCEEeccCCcceecCCCC-CCCCc
Q 045166 142 TYNKIPNILAGIILSNNRFDGAIPASIANLKGLQ--------FSGRIPQQLAELTFLAFFNVSDNYLTGPIPQG-KQFAT 212 (305)
Q Consensus 142 ~~~~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~--------l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~-~~~~~ 212 (305)
.....+++|+.|++++|..++..+..+.++..++ +.+..+..+..+++|++|+|++|+|+ .+|.. ..+..
T Consensus 165 l~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~ 243 (305)
T d1xkua_ 165 IPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKY 243 (305)
T ss_dssp CCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSS
T ss_pred cCcccCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccC
Confidence 2223467899999999999988888888877665 55566778899999999999999998 55653 45778
Q ss_pred cCCCccCCCC
Q 045166 213 FDNTSFDGNS 222 (305)
Q Consensus 213 l~~~~~~gNp 222 (305)
++.+++++|.
T Consensus 244 L~~L~Ls~N~ 253 (305)
T d1xkua_ 244 IQVVYLHNNN 253 (305)
T ss_dssp CCEEECCSSC
T ss_pred CCEEECCCCc
Confidence 8888888885
No 13
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.64 E-value=3.8e-16 Score=115.24 Aligned_cols=102 Identities=16% Similarity=0.209 Sum_probs=89.0
Q ss_pred CEEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCC
Q 045166 1 MFYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLS 80 (305)
Q Consensus 1 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls 80 (305)
|+|||++|+++ .+| .+..+++|++|++++|+++. +|+.++.+++|++|++++|.++. +| .+ +.+++|++|+++
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~~-lp~~~~~l~~L~~L~l~~N~i~~-l~-~~--~~l~~L~~L~l~ 73 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALEN-VD-GV--ANLPRLQELLLC 73 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCCC-CCGGGGGCTTCCEEECCSSCCCC-CG-GG--TTCSSCCEEECC
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccCc-chhhhhhhhcccccccccccccc-cC-cc--ccccccCeEECC
Confidence 68999999998 565 48999999999999999986 88889999999999999999986 44 46 889999999999
Q ss_pred CCcccccCCh-hhhhCcccchhccCcccccc
Q 045166 81 DNRFTGKLPS-NSFLCWNAMKIVNTSALRYL 110 (305)
Q Consensus 81 ~N~l~g~lp~-~~~~~l~~L~~L~l~~~~~~ 110 (305)
+|+++ .+|. ..+..+++|+.+++++|...
T Consensus 74 ~N~i~-~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 74 NNRLQ-QSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp SSCCC-SSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CCccC-CCCCchhhcCCCCCCEEECCCCcCC
Confidence 99998 5653 34788999999999987543
No 14
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.61 E-value=2.4e-15 Score=131.88 Aligned_cols=71 Identities=20% Similarity=0.333 Sum_probs=48.1
Q ss_pred cccccEEEccCCccccccchhhcCCCCce---eee----cCCccccCCCCCCEEeccCCcceecCCCCCCCCccCCCccC
Q 045166 147 PNILAGIILSNNRFDGAIPASIANLKGLQ---FSG----RIPQQLAELTFLAFFNVSDNYLTGPIPQGKQFATFDNTSFD 219 (305)
Q Consensus 147 ~~~L~~LdLs~N~l~g~~p~~~~~L~~L~---l~g----~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~l~~~~~~ 219 (305)
++.++.|++++|++++..| +..+++|+ +++ .+ +.+.++++|++|++++|++++.+| ...+..++.++++
T Consensus 306 ~~~l~~L~ls~n~l~~l~~--l~~l~~L~~L~L~~n~l~~l-~~l~~l~~L~~L~l~~N~l~~l~~-l~~l~~L~~L~L~ 381 (384)
T d2omza2 306 LKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSDV-SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLN 381 (384)
T ss_dssp CTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGGGCTTCCEEECCSSCCCBCGG-GTTCTTCSEEECC
T ss_pred hcccCeEECCCCCCCCCcc--cccCCCCCEEECCCCCCCCC-hhHcCCCCCCEEECCCCcCCCChh-hccCCCCCEeeCC
Confidence 5667778888888775332 44444443 333 23 358889999999999999997655 4456677777776
Q ss_pred CC
Q 045166 220 GN 221 (305)
Q Consensus 220 gN 221 (305)
+|
T Consensus 382 ~N 383 (384)
T d2omza2 382 DQ 383 (384)
T ss_dssp CE
T ss_pred CC
Confidence 65
No 15
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=4.2e-15 Score=122.37 Aligned_cols=195 Identities=13% Similarity=0.089 Sum_probs=125.3
Q ss_pred CEEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCC-CCCCCCCCCccEEeC
Q 045166 1 MFYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEE-PRTSCGFSKLRIIDL 79 (305)
Q Consensus 1 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~~~l~~L~~L~L 79 (305)
++++.+++.++ .+|+.+. +++++|++++|+|+...+..|.++++|++|++++|.+...++. .| .++++++++++
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f--~~l~~l~~l~~ 85 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVF--SNLPKLHEIRI 85 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSE--ESCTTCCEEEE
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccc--ccccccccccc
Confidence 35778888887 6776553 5789999999999874444688999999999999988775544 34 67888898887
Q ss_pred C-CCcccccCChhhhhCcccchhccCcccccccccccCCCCcCCCcccccc-ccccccccCccccc-ccccccccEEEcc
Q 045166 80 S-DNRFTGKLPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVLGTYD-YSRTMNSKGRVMTY-NKIPNILAGIILS 156 (305)
Q Consensus 80 s-~N~l~g~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~L~~LdLs 156 (305)
. .|++. .++...|..+++|+.++++++........ . .......... .........+.... ......++.|+++
T Consensus 86 ~~~n~l~-~~~~~~~~~l~~L~~l~l~~~~l~~~~~~--~-~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~ 161 (242)
T d1xwdc1 86 EKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDV--H-KIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLN 161 (242)
T ss_dssp ECCTTCC-EECTTSEECCTTCCEEEEESCCCCSCCCC--T-TTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECC
T ss_pred ccccccc-ccccccccccccccccccchhhhcccccc--c-ccccccccccccccccccccccccccccccccceeeecc
Confidence 5 46777 45556688899999999888543321110 0 0011111000 00000011111111 2223478889999
Q ss_pred CCccccccchhhcCCCCce----e----eecCCc-cccCCCCCCEEeccCCcceecCCC
Q 045166 157 NNRFDGAIPASIANLKGLQ----F----SGRIPQ-QLAELTFLAFFNVSDNYLTGPIPQ 206 (305)
Q Consensus 157 ~N~l~g~~p~~~~~L~~L~----l----~g~ip~-~l~~l~~L~~L~Ls~N~l~g~ip~ 206 (305)
+|+++ .++....+...+. + ...+|. .|.++++|++||+++|+++ .+|.
T Consensus 162 ~n~l~-~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~-~l~~ 218 (242)
T d1xwdc1 162 KNGIQ-EIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPS 218 (242)
T ss_dssp SSCCC-EECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCC-CCCS
T ss_pred ccccc-ccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCC-ccCH
Confidence 99999 5665555544443 1 124554 5889999999999999998 5554
No 16
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.58 E-value=5.6e-15 Score=119.19 Aligned_cols=160 Identities=14% Similarity=0.140 Sum_probs=116.1
Q ss_pred CEEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCC
Q 045166 1 MFYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLS 80 (305)
Q Consensus 1 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls 80 (305)
++|++++|.++. ++ .+..+++|++|++++|++++ ++ .++.+++|++|++++|++++ +| .+ +.+++|+.|+++
T Consensus 49 ~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~-l~-~l--~~l~~L~~L~l~ 120 (210)
T d1h6ta2 49 DQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKD-LS-SL--KDLKKLKSLSLE 120 (210)
T ss_dssp CEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-GG-GG--TTCTTCCEEECT
T ss_pred cEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccC-cc-ccccCccccccccccccccc-cc-cc--cccccccccccc
Confidence 468999999984 43 48899999999999999998 55 47899999999999999986 44 35 789999999999
Q ss_pred CCcccccCChhhhhCcccchhccCcccccccccccCCCCcCCCccccccccccccccCccc-ccccccccccEEEccCCc
Q 045166 81 DNRFTGKLPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNSKGRVM-TYNKIPNILAGIILSNNR 159 (305)
Q Consensus 81 ~N~l~g~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~~LdLs~N~ 159 (305)
+|.+. .++ . +..++.++.++++.|....... ...++ .+....+..+.+.. .....+++|+.|||++|+
T Consensus 121 ~~~~~-~~~-~-l~~l~~l~~l~~~~n~l~~~~~--~~~l~------~L~~l~l~~n~l~~i~~l~~l~~L~~L~Ls~N~ 189 (210)
T d1h6ta2 121 HNGIS-DIN-G-LVHLPQLESLYLGNNKITDITV--LSRLT------KLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNH 189 (210)
T ss_dssp TSCCC-CCG-G-GGGCTTCCEEECCSSCCCCCGG--GGGCT------TCSEEECCSSCCCCCGGGTTCTTCCEEECCSSC
T ss_pred ccccc-ccc-c-cccccccccccccccccccccc--ccccc------cccccccccccccccccccCCCCCCEEECCCCC
Confidence 99997 565 3 7888999999888754332111 11110 12222233332221 123458899999999999
Q ss_pred cccccchhhcCCCCceeeecCCccccCCCCCCEEeccC
Q 045166 160 FDGAIPASIANLKGLQFSGRIPQQLAELTFLAFFNVSD 197 (305)
Q Consensus 160 l~g~~p~~~~~L~~L~l~g~ip~~l~~l~~L~~L~Ls~ 197 (305)
++ .+| .+..+++|++|+|++
T Consensus 190 i~-~l~-----------------~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 190 IS-DLR-----------------ALAGLKNLDVLELFS 209 (210)
T ss_dssp CC-BCG-----------------GGTTCTTCSEEEEEE
T ss_pred CC-CCh-----------------hhcCCCCCCEEEccC
Confidence 98 333 367788999999874
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.58 E-value=5.2e-15 Score=118.33 Aligned_cols=160 Identities=19% Similarity=0.178 Sum_probs=107.5
Q ss_pred CCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCCCcccccCChhhhhCcccchh
Q 045166 22 SKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSDNRFTGKLPSNSFLCWNAMKI 101 (305)
Q Consensus 22 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~ 101 (305)
+++..+.++.+.+++.++ ...++++++|++++|.++. ++ .+ ..+++|++|++++|+++ .++ . ++++++|++
T Consensus 18 ~~~i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~-l~-~l--~~l~nL~~L~Ls~N~l~-~~~-~-l~~l~~L~~ 88 (199)
T d2omxa2 18 AEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-ID-GV--EYLNNLTQINFSNNQLT-DIT-P-LKNLTKLVD 88 (199)
T ss_dssp HHHHHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCC-CT-TG--GGCTTCCEEECCSSCCC-CCG-G-GTTCTTCCE
T ss_pred HHHHHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCCC-cc-cc--ccCCCcCcCcccccccc-Ccc-c-ccCCccccc
Confidence 334455677788776443 3457888999999998875 32 35 67889999999999998 455 3 788889999
Q ss_pred ccCcccccccccccCCCCcCCCccccccccccccccCcccccccccccccEEEccCCccccccchhhcCCCCce---eee
Q 045166 102 VNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNSKGRVMTYNKIPNILAGIILSNNRFDGAIPASIANLKGLQ---FSG 178 (305)
Q Consensus 102 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~---l~g 178 (305)
|++++|...... ....++.|+.|++++|.+... + .+..+++|+ +++
T Consensus 89 L~l~~n~~~~~~-----------------------------~l~~l~~L~~L~l~~~~~~~~-~-~~~~l~~L~~L~l~~ 137 (199)
T d2omxa2 89 ILMNNNQIADIT-----------------------------PLANLTNLTGLTLFNNQITDI-D-PLKNLTNLNRLELSS 137 (199)
T ss_dssp EECCSSCCCCCG-----------------------------GGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCSEEECCS
T ss_pred cccccccccccc-----------------------------ccccccccccccccccccccc-c-ccchhhhhHHhhhhh
Confidence 888875322110 112367888999998888743 2 344455444 333
Q ss_pred ---cCCccccCCCCCCEEeccCCcceecCCCCCCCCccCCCccCCCC
Q 045166 179 ---RIPQQLAELTFLAFFNVSDNYLTGPIPQGKQFATFDNTSFDGNS 222 (305)
Q Consensus 179 ---~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~l~~~~~~gNp 222 (305)
...+.+..+++|+.|++++|++++ ++....+.++..+++++|+
T Consensus 138 n~l~~~~~l~~~~~L~~L~l~~n~l~~-l~~l~~l~~L~~L~ls~N~ 183 (199)
T d2omxa2 138 NTISDISALSGLTSLQQLNFSSNQVTD-LKPLANLTTLERLDISSNK 183 (199)
T ss_dssp SCCCCCGGGTTCTTCSEEECCSSCCCC-CGGGTTCTTCCEEECCSSC
T ss_pred hhhcccccccccccccccccccccccC-CccccCCCCCCEEECCCCC
Confidence 122357778888888888888875 3434566777777777774
No 18
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3e-15 Score=115.64 Aligned_cols=133 Identities=9% Similarity=0.005 Sum_probs=97.0
Q ss_pred hhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCCCcccccCChhhhhCc
Q 045166 17 SLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSDNRFTGKLPSNSFLCW 96 (305)
Q Consensus 17 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l 96 (305)
.+.++.++++|+|++|+|+. +|..+..+++|++|+|++|.++. ++ .+ ..+++|++|++++|+++ .+|..++..+
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~--~~l~~L~~L~ls~N~i~-~l~~~~~~~l 86 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRK-LD-GF--PLLRRLKTLLVNNNRIC-RIGEGLDQAL 86 (162)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCE-EC-CC--CCCSSCCEEECCSSCCC-EECSCHHHHC
T ss_pred hccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCc-cC-Cc--ccCcchhhhhccccccc-CCCccccccc
Confidence 46788899999999999987 67777889999999999999986 44 46 78999999999999999 7776767778
Q ss_pred ccchhccCcccccccccccCCCCcCCCccccccccccccccCcccccccccccccEEEccCCccccccchhhcCCCCcee
Q 045166 97 NAMKIVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNSKGRVMTYNKIPNILAGIILSNNRFDGAIPASIANLKGLQF 176 (305)
Q Consensus 97 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~l 176 (305)
++|+.|++++|....... ......+++|+.|++++|.++ ..|..-
T Consensus 87 ~~L~~L~L~~N~i~~~~~--------------------------l~~l~~l~~L~~L~l~~N~i~-~~~~~r-------- 131 (162)
T d1a9na_ 87 PDLTELILTNNSLVELGD--------------------------LDPLASLKSLTYLCILRNPVT-NKKHYR-------- 131 (162)
T ss_dssp TTCCEEECCSCCCCCGGG--------------------------GGGGGGCTTCCEEECCSSGGG-GSTTHH--------
T ss_pred cccccceecccccccccc--------------------------ccccccccccchhhcCCCccc-cccchH--------
Confidence 888888888754321000 011223677888888888877 333210
Q ss_pred eecCCccccCCCCCCEEe
Q 045166 177 SGRIPQQLAELTFLAFFN 194 (305)
Q Consensus 177 ~g~ip~~l~~l~~L~~L~ 194 (305)
+..+..+++|++||
T Consensus 132 ----~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 132 ----LYVIYKVPQVRVLD 145 (162)
T ss_dssp ----HHHHHHCTTCSEET
T ss_pred ----HHHHHHCCCcCeeC
Confidence 12345667777776
No 19
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.57 E-value=1.3e-14 Score=118.43 Aligned_cols=190 Identities=13% Similarity=0.094 Sum_probs=106.8
Q ss_pred EcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCCCc
Q 045166 4 LRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSDNR 83 (305)
Q Consensus 4 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~ 83 (305)
+++.+++++.. .+..+.+|+.|++.+|.++. ++ .+..+++|++|++++|++++..| + .++++++++++++|.
T Consensus 25 ~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~~~~--l--~~l~~l~~l~~~~n~ 96 (227)
T d1h6ua2 25 AAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--L--KNLTKITELELSGNP 96 (227)
T ss_dssp HTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--G--TTCCSCCEEECCSCC
T ss_pred HhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeecccc--c--ccccccccccccccc
Confidence 45556666543 34667788888888888876 43 47778888888888888776442 4 677888888888888
Q ss_pred ccccCChhhhhCcccchhccCcccccccccccCCCCcCCCccccccccccccccCcc-cccccccccccEEEccCCcccc
Q 045166 84 FTGKLPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNSKGRV-MTYNKIPNILAGIILSNNRFDG 162 (305)
Q Consensus 84 l~g~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~LdLs~N~l~g 162 (305)
++ .++ . +.++++|+.+.++.+.......+... + ......+...... .......++|+.|++++|.+++
T Consensus 97 ~~-~i~-~-l~~l~~L~~l~l~~~~~~~~~~~~~~--~------~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~ 165 (227)
T d1h6ua2 97 LK-NVS-A-IAGLQSIKTLDLTSTQITDVTPLAGL--S------NLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSD 165 (227)
T ss_dssp CS-CCG-G-GTTCTTCCEEECTTSCCCCCGGGTTC--T------TCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred cc-ccc-c-ccccccccccccccccccccchhccc--c------chhhhhchhhhhchhhhhcccccccccccccccccc
Confidence 77 565 3 66777888777776433221111000 0 0000011111111 1112235567777777777663
Q ss_pred ccchhhcCCCCce---eee----cCCccccCCCCCCEEeccCCcceecCCCCCCCCccCCC
Q 045166 163 AIPASIANLKGLQ---FSG----RIPQQLAELTFLAFFNVSDNYLTGPIPQGKQFATFDNT 216 (305)
Q Consensus 163 ~~p~~~~~L~~L~---l~g----~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~l~~~ 216 (305)
..+ +.++++|+ +++ .+| .++++++|++|++++|++++ +|....+..+..+
T Consensus 166 ~~~--l~~l~~L~~L~Ls~n~l~~l~-~l~~l~~L~~L~Ls~N~lt~-i~~l~~l~~L~~L 222 (227)
T d1h6ua2 166 LTP--LANLSKLTTLKADDNKISDIS-PLASLPNLIEVHLKNNQISD-VSPLANTSNLFIV 222 (227)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCCG-GGGGCTTCCEEECTTSCCCB-CGGGTTCTTCCEE
T ss_pred chh--hcccccceecccCCCccCCCh-hhcCCCCCCEEECcCCcCCC-CcccccCCCCCEE
Confidence 222 44444433 222 122 36677888888888888774 3333334444433
No 20
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.54 E-value=1e-14 Score=107.37 Aligned_cols=59 Identities=19% Similarity=0.224 Sum_probs=50.0
Q ss_pred CEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCCCcccccCC
Q 045166 25 EFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSDNRFTGKLP 89 (305)
Q Consensus 25 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~g~lp 89 (305)
++|+|++|+++. ++ .+..+++|++|++++|+++. +|..+ +.+++|+.|++++|.++ .+|
T Consensus 1 R~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~~-lp~~~--~~l~~L~~L~l~~N~i~-~l~ 59 (124)
T d1dcea3 1 RVLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLRA-LPPAL--AALRCLEVLQASDNALE-NVD 59 (124)
T ss_dssp SEEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCCC-CCGGG--GGCTTCCEEECCSSCCC-CCG
T ss_pred CEEEcCCCCCCC-Cc-ccccCCCCCEEECCCCccCc-chhhh--hhhhccccccccccccc-ccC
Confidence 579999999986 55 48889999999999999985 67667 78999999999999998 565
No 21
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=2.5e-15 Score=116.12 Aligned_cols=103 Identities=13% Similarity=0.095 Sum_probs=87.2
Q ss_pred CEEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCC
Q 045166 1 MFYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLS 80 (305)
Q Consensus 1 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls 80 (305)
++|||++|+|+ .+|..+..+++|+.||+++|+|+. ++ .+..+++|++|++++|+++...+..+ ..+++|+.|+++
T Consensus 21 r~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~--~~l~~L~~L~L~ 95 (162)
T d1a9na_ 21 RELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLD--QALPDLTELILT 95 (162)
T ss_dssp EEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHH--HHCTTCCEEECC
T ss_pred cEEECCCCCCC-ccCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccc--ccccccccceec
Confidence 47999999998 567777889999999999999987 54 58899999999999999987544444 578999999999
Q ss_pred CCcccccCCh-hhhhCcccchhccCccccc
Q 045166 81 DNRFTGKLPS-NSFLCWNAMKIVNTSALRY 109 (305)
Q Consensus 81 ~N~l~g~lp~-~~~~~l~~L~~L~l~~~~~ 109 (305)
+|+++ .++. ..+..+++|+.+++++|..
T Consensus 96 ~N~i~-~~~~l~~l~~l~~L~~L~l~~N~i 124 (162)
T d1a9na_ 96 NNSLV-ELGDLDPLASLKSLTYLCILRNPV 124 (162)
T ss_dssp SCCCC-CGGGGGGGGGCTTCCEEECCSSGG
T ss_pred ccccc-ccccccccccccccchhhcCCCcc
Confidence 99998 6654 3478899999999998644
No 22
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.51 E-value=6e-14 Score=122.76 Aligned_cols=176 Identities=20% Similarity=0.211 Sum_probs=122.3
Q ss_pred CEEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCC
Q 045166 1 MFYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLS 80 (305)
Q Consensus 1 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls 80 (305)
..+++++|.+++..| +..+++|+.|++++|+++. +| .+..+++|+.|++++|.+++..+ + ..+++|++|+++
T Consensus 200 ~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--~--~~~~~L~~L~l~ 271 (384)
T d2omza2 200 ESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--L--SGLTKLTELKLG 271 (384)
T ss_dssp SEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGG--G--TTCTTCSEEECC
T ss_pred ceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-cc-hhhcccccchhccccCccCCCCc--c--cccccCCEeecc
Confidence 367899999886554 5678899999999999986 44 67888999999999999987543 4 678899999999
Q ss_pred CCcccccCChhhhhCcccchhccCcccccccccccCCCCcCCCccccccccccccccCccc-ccccccccccEEEccCCc
Q 045166 81 DNRFTGKLPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNSKGRVM-TYNKIPNILAGIILSNNR 159 (305)
Q Consensus 81 ~N~l~g~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~~LdLs~N~ 159 (305)
+|+++ .++. +..+..++.+.++.+....... ... .. ....+++..+.+.. .....+++|+.|++++|+
T Consensus 272 ~~~l~-~~~~--~~~~~~l~~l~~~~n~l~~~~~--~~~-~~-----~l~~L~ls~n~l~~l~~l~~l~~L~~L~L~~n~ 340 (384)
T d2omza2 272 ANQIS-NISP--LAGLTALTNLELNENQLEDISP--ISN-LK-----NLTYLTLYFNNISDISPVSSLTKLQRLFFANNK 340 (384)
T ss_dssp SSCCC-CCGG--GTTCTTCSEEECCSSCCSCCGG--GGG-CT-----TCSEEECCSSCCSCCGGGGGCTTCCEEECCSSC
T ss_pred CcccC-CCCc--cccccccccccccccccccccc--cch-hc-----ccCeEECCCCCCCCCcccccCCCCCEEECCCCC
Confidence 99998 4552 6677778887777643321100 000 00 11122222222222 123458899999999999
Q ss_pred cccccchhhcCCCCce--------eeecCCccccCCCCCCEEeccCCc
Q 045166 160 FDGAIPASIANLKGLQ--------FSGRIPQQLAELTFLAFFNVSDNY 199 (305)
Q Consensus 160 l~g~~p~~~~~L~~L~--------l~g~ip~~l~~l~~L~~L~Ls~N~ 199 (305)
++ .+| .+.++++|+ +++..| +.++++|+.|+|++|.
T Consensus 341 l~-~l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~Na 384 (384)
T d2omza2 341 VS-DVS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQA 384 (384)
T ss_dssp CC-CCG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCEE
T ss_pred CC-CCh-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCCc
Confidence 98 455 578777776 443333 7899999999999983
No 23
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.50 E-value=3.7e-14 Score=115.61 Aligned_cols=184 Identities=17% Similarity=0.124 Sum_probs=117.1
Q ss_pred CCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCCCcccccCChhhhhCcccch
Q 045166 21 CSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSDNRFTGKLPSNSFLCWNAMK 100 (305)
Q Consensus 21 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~ 100 (305)
++++..++++.+.+++.+ .+..+.+|++|++.+|.++. ++ .+ ..+++|++|++++|+++ .++. +..+++++
T Consensus 18 l~~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~-l~-~l--~~l~~L~~L~ls~n~i~-~~~~--l~~l~~l~ 88 (227)
T d1h6ua2 18 LANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GV--QYLNNLIGLELKDNQIT-DLAP--LKNLTKIT 88 (227)
T ss_dssp HHHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TG--GGCTTCCEEECCSSCCC-CCGG--GTTCCSCC
T ss_pred HHHHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCc-ch-hH--hcCCCCcEeecCCceee-cccc--cccccccc
Confidence 444556678888888744 45678899999999999986 43 56 78999999999999998 4542 88899999
Q ss_pred hccCcccccccccccCCCCcCCCccccccccccccccCcc-cccccccccccEEEccCCccccccc-hhhcCCCCceeee
Q 045166 101 IVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNSKGRV-MTYNKIPNILAGIILSNNRFDGAIP-ASIANLKGLQFSG 178 (305)
Q Consensus 101 ~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~LdLs~N~l~g~~p-~~~~~L~~L~l~g 178 (305)
.+++++|....-.. ....+ .+....+..+... .........+..++++++.+....+ ....++..|.+.+
T Consensus 89 ~l~~~~n~~~~i~~--l~~l~------~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 160 (227)
T d1h6ua2 89 ELELSGNPLKNVSA--IAGLQ------SIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGN 160 (227)
T ss_dssp EEECCSCCCSCCGG--GTTCT------TCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCS
T ss_pred cccccccccccccc--ccccc------cccccccccccccccchhccccchhhhhchhhhhchhhhhccccccccccccc
Confidence 99988753321110 01000 1111111111111 1122335677888888888774333 1122334444433
Q ss_pred c---CCccccCCCCCCEEeccCCcceecCCCCCCCCccCCCccCCCC
Q 045166 179 R---IPQQLAELTFLAFFNVSDNYLTGPIPQGKQFATFDNTSFDGNS 222 (305)
Q Consensus 179 ~---ip~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~l~~~~~~gNp 222 (305)
. ....+.++++|++||+++|++++ +|....++.+..+++++|.
T Consensus 161 n~~~~~~~l~~l~~L~~L~Ls~n~l~~-l~~l~~l~~L~~L~Ls~N~ 206 (227)
T d1h6ua2 161 AQVSDLTPLANLSKLTTLKADDNKISD-ISPLASLPNLIEVHLKNNQ 206 (227)
T ss_dssp SCCCCCGGGTTCTTCCEEECCSSCCCC-CGGGGGCTTCCEEECTTSC
T ss_pred cccccchhhcccccceecccCCCccCC-ChhhcCCCCCCEEECcCCc
Confidence 1 22347889999999999999985 4544556777777788874
No 24
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.41 E-value=1.8e-12 Score=111.65 Aligned_cols=91 Identities=20% Similarity=0.264 Sum_probs=74.2
Q ss_pred CEEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCC
Q 045166 1 MFYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLS 80 (305)
Q Consensus 1 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls 80 (305)
++|||++|.++ .+|+. +++|++|++++|+|+. +|+. +.+|+.|++++|+++. ++. + .+.|++||++
T Consensus 41 ~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~-l----p~~L~~L~L~ 106 (353)
T d1jl5a_ 41 HELELNNLGLS-SLPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSD-L----PPLLEYLGVS 106 (353)
T ss_dssp SEEECTTSCCS-CCCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCS-C----CTTCCEEECC
T ss_pred CEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCcc-cccc---hhhhhhhhhhhcccch-hhh-h----cccccccccc
Confidence 47999999998 68853 5789999999999995 7865 4689999999999874 332 1 2469999999
Q ss_pred CCcccccCChhhhhCcccchhccCcccc
Q 045166 81 DNRFTGKLPSNSFLCWNAMKIVNTSALR 108 (305)
Q Consensus 81 ~N~l~g~lp~~~~~~l~~L~~L~l~~~~ 108 (305)
+|.+. .+|. ++.+++|+.|+++++.
T Consensus 107 ~n~l~-~lp~--~~~l~~L~~L~l~~~~ 131 (353)
T d1jl5a_ 107 NNQLE-KLPE--LQNSSFLKIIDVDNNS 131 (353)
T ss_dssp SSCCS-SCCC--CTTCTTCCEEECCSSC
T ss_pred ccccc-cccc--hhhhccceeecccccc
Confidence 99998 7884 6789999999998753
No 25
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=3.6e-13 Score=103.07 Aligned_cols=102 Identities=14% Similarity=-0.009 Sum_probs=87.8
Q ss_pred EEEcccCccccccChhhhcCCCCCEEeccCc-ccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCC
Q 045166 2 FYLRNENTFLQRIPRSLINCSKLEFLGLGIN-QISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLS 80 (305)
Q Consensus 2 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls 80 (305)
.++.+++.+. ..|..+..+++|++|++++| .++..-+..|.++++|+.|+|++|+++...|..| ..+++|++|||+
T Consensus 12 ~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f--~~l~~L~~L~Ls 88 (156)
T d2ifga3 12 GLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAF--HFTPRLSRLNLS 88 (156)
T ss_dssp CEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGG--GSCSCCCEEECC
T ss_pred eEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccc--cccccccceecc
Confidence 4678888887 67888999999999999876 5887556789999999999999999998777777 889999999999
Q ss_pred CCcccccCChhhhhCcccchhccCcccc
Q 045166 81 DNRFTGKLPSNSFLCWNAMKIVNTSALR 108 (305)
Q Consensus 81 ~N~l~g~lp~~~~~~l~~L~~L~l~~~~ 108 (305)
+|+++ .+|.+.+..+ .|+.|++++|.
T Consensus 89 ~N~l~-~l~~~~~~~~-~l~~L~L~~Np 114 (156)
T d2ifga3 89 FNALE-SLSWKTVQGL-SLQELVLSGNP 114 (156)
T ss_dssp SSCCS-CCCSTTTCSC-CCCEEECCSSC
T ss_pred CCCCc-ccChhhhccc-cccccccCCCc
Confidence 99999 8998867655 69999998864
No 26
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=2.4e-12 Score=105.53 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=63.6
Q ss_pred CEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCCCcccccCChhhhhCcccchhccC
Q 045166 25 EFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSDNRFTGKLPSNSFLCWNAMKIVNT 104 (305)
Q Consensus 25 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~l 104 (305)
+.++.+++.++. +|+.+. +++++|++++|+++...+..| .++++|++|++++|.+...+|...|.+++.++.+.+
T Consensus 11 ~~i~c~~~~l~~-iP~~l~--~~l~~L~Ls~n~i~~l~~~~f--~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~ 85 (242)
T d1xwdc1 11 RVFLCQESKVTE-IPSDLP--RNAIELRFVLTKLRVIQKGAF--SGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 85 (242)
T ss_dssp SEEEEESCSCSS-CCSCSC--SCCSEEEEESCCCCEECTTTT--TTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEE
T ss_pred CEEEEeCCCCCC-cCCCCC--CCCCEEECcCCcCCccChhHh--hccchhhhhhhccccccceeeccccccccccccccc
Confidence 688888888885 887553 589999999999987555567 889999999999999986777777888999888876
Q ss_pred cc
Q 045166 105 SA 106 (305)
Q Consensus 105 ~~ 106 (305)
..
T Consensus 86 ~~ 87 (242)
T d1xwdc1 86 EK 87 (242)
T ss_dssp EC
T ss_pred cc
Confidence 54
No 27
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.34 E-value=1.7e-14 Score=115.19 Aligned_cols=44 Identities=25% Similarity=0.181 Sum_probs=24.1
Q ss_pred cccccEEEccCCccccccchhhcCCCCceeeecCCccccCCCCCCEEeccCCcceecCC
Q 045166 147 PNILAGIILSNNRFDGAIPASIANLKGLQFSGRIPQQLAELTFLAFFNVSDNYLTGPIP 205 (305)
Q Consensus 147 ~~~L~~LdLs~N~l~g~~p~~~~~L~~L~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip 205 (305)
+++|+.||+++|+++ .++. + ..+..+++|++|++++|+++...+
T Consensus 114 l~~L~~L~L~~N~i~-~~~~-~-------------~~l~~l~~L~~L~L~~N~l~~~~~ 157 (198)
T d1m9la_ 114 LVNLRVLYMSNNKIT-NWGE-I-------------DKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHSSEEEESEEECC-CHHH-H-------------HHHTTTTTCSEEEECSSHHHHHHC
T ss_pred cccccccccccchhc-cccc-c-------------ccccCCCccceeecCCCccccCcc
Confidence 455666666666665 2221 0 234556666666666666654433
No 28
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=3.1e-12 Score=97.74 Aligned_cols=72 Identities=13% Similarity=0.056 Sum_probs=54.9
Q ss_pred hcCCCCCEEeccCcccccCcchhhcCCCCCCEEEccccc-ceeeeCCCCCCCCCCCccEEeCCCCcccccCChhhhh
Q 045166 19 INCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNI-FYGIIEEPRTSCGFSKLRIIDLSDNRFTGKLPSNSFL 94 (305)
Q Consensus 19 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~ 94 (305)
..+...+.++.+++.+.. .|..+..+++|++|++++|+ ++...+..| .++++|+.|++++|+|+ .++.+.|.
T Consensus 5 C~c~~~~~l~c~~~~~~~-~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f--~~l~~L~~L~Ls~N~l~-~i~~~~f~ 77 (156)
T d2ifga3 5 CCPHGSSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDL--RGLGELRNLTIVKSGLR-FVAPDAFH 77 (156)
T ss_dssp SCCSSSSCEECCSSCCCT-TTTTSCSCSCCSEEECCSCSSCCEECGGGS--CSCCCCSEEECCSSCCC-EECTTGGG
T ss_pred CCcCCCCeEEecCCCCcc-CcccccCccccCeeecCCCccccccCchhh--ccccccCcceeeccccC-Cccccccc
Confidence 445566778888888876 77788888899999997664 776555567 78899999999999998 66655444
No 29
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.31 E-value=2.7e-11 Score=104.03 Aligned_cols=73 Identities=22% Similarity=0.246 Sum_probs=52.1
Q ss_pred CEEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCC
Q 045166 1 MFYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLS 80 (305)
Q Consensus 1 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls 80 (305)
++|+|++|+|+ .+|+. +.+|+.|++++|+++. +++. .+.|++|++++|.+.. +|. + +.+++|+.|+++
T Consensus 61 ~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~-l~~l---p~~L~~L~L~~n~l~~-lp~-~--~~l~~L~~L~l~ 128 (353)
T d1jl5a_ 61 ESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LPE-L--QNSSFLKIIDVD 128 (353)
T ss_dssp SEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CCC-C--TTCTTCCEEECC
T ss_pred CEEECCCCCCc-ccccc---hhhhhhhhhhhcccch-hhhh---cccccccccccccccc-ccc-h--hhhccceeeccc
Confidence 57999999998 77865 4577888888888775 4421 1457888888888764 453 3 567778888887
Q ss_pred CCccc
Q 045166 81 DNRFT 85 (305)
Q Consensus 81 ~N~l~ 85 (305)
+|.+.
T Consensus 129 ~~~~~ 133 (353)
T d1jl5a_ 129 NNSLK 133 (353)
T ss_dssp SSCCS
T ss_pred ccccc
Confidence 77665
No 30
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=1.1e-12 Score=110.38 Aligned_cols=176 Identities=16% Similarity=0.080 Sum_probs=84.5
Q ss_pred cCCCCCEEeccCcccccC-cchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCCC-cccccCChhhhhCcc
Q 045166 20 NCSKLEFLGLGINQISDT-FPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSDN-RFTGKLPSNSFLCWN 97 (305)
Q Consensus 20 ~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N-~l~g~lp~~~~~~l~ 97 (305)
...+|++||++++.++.. ++..+..+++|++|+++++.++...+..+ +.+++|++|+++++ .++..--..+...++
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l--~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~ 121 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTL--AKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHH--TTCTTCSEEECTTCBSCCHHHHHHHHHHCT
T ss_pred cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHH--hcCCCCcCccccccccccccccchhhHHHH
Confidence 445666666666666532 23344566666666666666655444444 55666666666663 343111112234556
Q ss_pred cchhccCccccccccccc--CCCCcCCCccccccccc--cccccCcccccccccccccEEEccCC-ccccccchhhcCCC
Q 045166 98 AMKIVNTSALRYLQDVLF--PYGQVSSNVLGTYDYSR--TMNSKGRVMTYNKIPNILAGIILSNN-RFDGAIPASIANLK 172 (305)
Q Consensus 98 ~L~~L~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~L~~LdLs~N-~l~g~~p~~~~~L~ 172 (305)
+|++|+++++..+..... ........+........ .+...+ ...+...+++|+.||+++| .+++..+..+.+++
T Consensus 122 ~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~-l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~ 200 (284)
T d2astb2 122 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSD-LSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLN 200 (284)
T ss_dssp TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHH-HHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCT
T ss_pred hccccccccccccccccchhhhcccccccchhhhccccccccccc-ccccccccccccccccccccCCCchhhhhhcccC
Confidence 666666665322211000 00000011111100000 000000 1112233678999999885 57766666666555
Q ss_pred Cce---ee------ecCCccccCCCCCCEEeccCC
Q 045166 173 GLQ---FS------GRIPQQLAELTFLAFFNVSDN 198 (305)
Q Consensus 173 ~L~---l~------g~ip~~l~~l~~L~~L~Ls~N 198 (305)
+|+ ++ ......++++++|+.|+++++
T Consensus 201 ~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 201 YLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp TCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 554 22 222334566677777777654
No 31
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=9.5e-12 Score=104.56 Aligned_cols=212 Identities=10% Similarity=0.041 Sum_probs=117.6
Q ss_pred CEEEcccCccccccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeee-CCCCCCCCCCCccEEeC
Q 045166 1 MFYLRNENTFLQRIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGII-EEPRTSCGFSKLRIIDL 79 (305)
Q Consensus 1 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~~~l~~L~~L~L 79 (305)
+.|||+++.+.......+.. ..+..+.++...+..... ......+|++||++++.++... +..+ ..+++|++|++
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~~~~-~~~~~~~L~~LdLs~~~i~~~~l~~l~--~~c~~L~~L~L 78 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGIL--SQCSKLQNLSL 78 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHH--TTBCCCSEEEC
T ss_pred CEEECCCCCCCchHHHHHHh-ccceEeeccccccccchh-hhccCCCCCEEECCCCccCHHHHHHHH--HhCCCcccccc
Confidence 57999999886443333322 245677777777654322 3345678999999999886532 2334 67899999999
Q ss_pred CCCcccccCChhhhhCcccchhccCcccccccccccCCCCcCCCccccccccccccccC-c-----ccccccccccccEE
Q 045166 80 SDNRFTGKLPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTMNSKG-R-----VMTYNKIPNILAGI 153 (305)
Q Consensus 80 s~N~l~g~lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~L~~L 153 (305)
+++.++...+.. +..+++|+.|+++++..+++.... .+...+. .+..+++.... + ........+.|+.|
T Consensus 79 ~~~~l~~~~~~~-l~~~~~L~~L~Ls~c~~itd~~l~--~l~~~~~--~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L 153 (284)
T d2astb2 79 EGLRLSDPIVNT-LAKNSNLVRLNLSGCSGFSEFALQ--TLLSSCS--RLDELNLSWCFDFTEKHVQVAVAHVSETITQL 153 (284)
T ss_dssp TTCBCCHHHHHH-HTTCTTCSEEECTTCBSCCHHHHH--HHHHHCT--TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEE
T ss_pred cccCCCcHHHHH-HhcCCCCcCccccccccccccccc--hhhHHHH--hccccccccccccccccchhhhcccccccchh
Confidence 999998666654 788899999999885443311100 0000000 11222222211 1 11111224567788
Q ss_pred EccCC--ccccc-cchhhc---CCCCce------eeecCCccccCCCCCCEEeccC-CcceecCCC-CCCCCccCCCccC
Q 045166 154 ILSNN--RFDGA-IPASIA---NLKGLQ------FSGRIPQQLAELTFLAFFNVSD-NYLTGPIPQ-GKQFATFDNTSFD 219 (305)
Q Consensus 154 dLs~N--~l~g~-~p~~~~---~L~~L~------l~g~ip~~l~~l~~L~~L~Ls~-N~l~g~ip~-~~~~~~l~~~~~~ 219 (305)
++++. .++.. +..... +|+.|. +++..+..+.++++|++|++++ +.++..... ..+.+.++.+++.
T Consensus 154 ~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~ 233 (284)
T d2astb2 154 NLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVF 233 (284)
T ss_dssp ECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred hhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeee
Confidence 87754 33321 222222 333333 3334455677778888888887 355543221 1233444444454
Q ss_pred CC
Q 045166 220 GN 221 (305)
Q Consensus 220 gN 221 (305)
|+
T Consensus 234 ~~ 235 (284)
T d2astb2 234 GI 235 (284)
T ss_dssp TS
T ss_pred CC
Confidence 43
No 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.07 E-value=1e-12 Score=104.52 Aligned_cols=88 Identities=19% Similarity=0.235 Sum_probs=56.2
Q ss_pred ccChhhhcCCCCCEEeccCcccccCcchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCCCcccccCChhh
Q 045166 13 RIPRSLINCSKLEFLGLGINQISDTFPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSDNRFTGKLPSNS 92 (305)
Q Consensus 13 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~g~lp~~~ 92 (305)
.+|.++..+++|++|+|++|+|+. ++ .+..+++|++|+|++|.++. +|... ..+++|+.|++++|+++ .++ .
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~~-i~~~~--~~~~~L~~L~l~~N~i~-~l~-~- 110 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLD--AVADTLEELWISYNQIA-SLS-G- 110 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEECS-CSSHH--HHHHHCCEEECSEEECC-CHH-H-
T ss_pred hhhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhccccccc-ccccc--ccccccccccccccccc-ccc-c-
Confidence 345567777777777777777765 44 36667777777777777653 44333 33456777777777776 443 2
Q ss_pred hhCcccchhccCcccc
Q 045166 93 FLCWNAMKIVNTSALR 108 (305)
Q Consensus 93 ~~~l~~L~~L~l~~~~ 108 (305)
+..+++|+.|++++|.
T Consensus 111 ~~~l~~L~~L~L~~N~ 126 (198)
T d1m9la_ 111 IEKLVNLRVLYMSNNK 126 (198)
T ss_dssp HHHHHHSSEEEESEEE
T ss_pred ccccccccccccccch
Confidence 5666777777776653
No 33
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.65 E-value=2.7e-09 Score=91.56 Aligned_cols=165 Identities=15% Similarity=0.167 Sum_probs=105.9
Q ss_pred CEEEcccCccc--c--ccC---------hhhhcCCCCCEEeccCcccccC----cchhhcCCCCCCEEEcccccceee--
Q 045166 1 MFYLRNENTFL--Q--RIP---------RSLINCSKLEFLGLGINQISDT----FPSWLGTLPKLNVLILRSNIFYGI-- 61 (305)
Q Consensus 1 ~~L~Ls~N~l~--~--~~p---------~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~-- 61 (305)
++|++++|.+. + .+. ........|+.+++++|.++.. +...+...+.|++|++++|.++..
T Consensus 124 ~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~ 203 (344)
T d2ca6a1 124 EHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGI 203 (344)
T ss_dssp CEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHH
T ss_pred hheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhccccccccccccccc
Confidence 46888888752 1 111 1234678899999999988642 333456788999999999998642
Q ss_pred ---eCCCCCCCCCCCccEEeCCCCccccc----CChhhhhCcccchhccCcccccccccccCCCCcCCCccccccccccc
Q 045166 62 ---IEEPRTSCGFSKLRIIDLSDNRFTGK----LPSNSFLCWNAMKIVNTSALRYLQDVLFPYGQVSSNVLGTYDYSRTM 134 (305)
Q Consensus 62 ---~p~~~~~~~l~~L~~L~Ls~N~l~g~----lp~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (305)
+...+ ..+++|+.|++++|.++.. +. ..+...++|+.|++++|..-+....
T Consensus 204 ~~~l~~~l--~~~~~L~~L~Ls~N~i~~~g~~~L~-~~l~~~~~L~~L~Ls~n~i~~~g~~------------------- 261 (344)
T d2ca6a1 204 EHLLLEGL--AYCQELKVLDLQDNTFTHLGSSALA-IALKSWPNLRELGLNDCLLSARGAA------------------- 261 (344)
T ss_dssp HHHHHTTG--GGCTTCCEEECCSSCCHHHHHHHHH-HHGGGCTTCCEEECTTCCCCHHHHH-------------------
T ss_pred ccchhhhh--cchhhhccccccccccccccccccc-ccccccccchhhhhhcCccCchhhH-------------------
Confidence 23344 6788999999999998632 22 2356778899999888642211000
Q ss_pred cccCcccccc-cccccccEEEccCCccccccchhhcCCCCceeeecCCccc-cCCCCCCEEeccCCccee
Q 045166 135 NSKGRVMTYN-KIPNILAGIILSNNRFDGAIPASIANLKGLQFSGRIPQQL-AELTFLAFFNVSDNYLTG 202 (305)
Q Consensus 135 ~~~~~~~~~~-~~~~~L~~LdLs~N~l~g~~p~~~~~L~~L~l~g~ip~~l-~~l~~L~~L~Ls~N~l~g 202 (305)
.+...+. .....|+.||+++|+++..-...+. ..+ .++++|++|++++|++..
T Consensus 262 ---~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~------------~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 262 ---AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK------------TVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp ---HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHH------------HHHHHHCTTCCEEECTTSBSCT
T ss_pred ---HHHHHhhhccCCCCCEEECCCCcCChHHHHHHH------------HHHHccCCCCCEEECCCCcCCC
Confidence 0000000 0135699999999998743222221 223 257789999999999863
No 34
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.64 E-value=1.7e-09 Score=92.82 Aligned_cols=108 Identities=18% Similarity=0.135 Sum_probs=67.0
Q ss_pred CEEEcccCcccc---c-------cChhhhcCCCCCEEeccCcccccC----cchhhcCCCCCCEEEcccccceeeeCCCC
Q 045166 1 MFYLRNENTFLQ---R-------IPRSLINCSKLEFLGLGINQISDT----FPSWLGTLPKLNVLILRSNIFYGIIEEPR 66 (305)
Q Consensus 1 ~~L~Ls~N~l~~---~-------~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 66 (305)
+.|+++++.... . +.+.+..+++|+.|+|++|.++.. +...+...++|++|++++|.+...-...+
T Consensus 62 ~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l 141 (344)
T d2ca6a1 62 EIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKI 141 (344)
T ss_dssp CEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHH
T ss_pred CEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccccccchhhhhcccccchheecccccccccccccc
Confidence 357777665431 1 223456788999999999988764 33345567899999999987642100000
Q ss_pred -----------CCCCCCCccEEeCCCCcccccCC---hhhhhCcccchhccCcccc
Q 045166 67 -----------TSCGFSKLRIIDLSDNRFTGKLP---SNSFLCWNAMKIVNTSALR 108 (305)
Q Consensus 67 -----------~~~~l~~L~~L~Ls~N~l~g~lp---~~~~~~l~~L~~L~l~~~~ 108 (305)
.....+.|+.+++++|+++..-- ...+...+.|+.+++++|.
T Consensus 142 ~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~ 197 (344)
T d2ca6a1 142 ARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNG 197 (344)
T ss_dssp HHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSC
T ss_pred cccccccccccccccCcccceeecccccccccccccccchhhhhhhhccccccccc
Confidence 00245678888888888762211 1124556778888887754
No 35
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.42 E-value=5.1e-09 Score=79.93 Aligned_cols=84 Identities=19% Similarity=0.127 Sum_probs=47.7
Q ss_pred hhcCCCCCEEeccCcccccC--cchhhcCCCCCCEEEcccccceeeeCCCCCCCCCCCccEEeCCCCcccccCCh-----
Q 045166 18 LINCSKLEFLGLGINQISDT--FPSWLGTLPKLNVLILRSNIFYGIIEEPRTSCGFSKLRIIDLSDNRFTGKLPS----- 90 (305)
Q Consensus 18 ~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~g~lp~----- 90 (305)
+..+++|++|+|++|+|+.. ++..+..+++|+.|+|++|.++..-+-.+ .+..+|+.|++++|.+......
T Consensus 61 ~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~--l~~~~L~~L~L~~Npl~~~~~~~~~y~ 138 (162)
T d1koha1 61 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDK--IKGLKLEELWLDGNSLSDTFRDQSTYI 138 (162)
T ss_dssp HHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHH--HTTCCCSSCCCTTSTTSSSSSSHHHHH
T ss_pred HHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhh--hhccccceeecCCCCcCcCcccchhHH
Confidence 34567777777777777652 23345566777777777777664221111 2334567777777777643321
Q ss_pred -hhhhCcccchhcc
Q 045166 91 -NSFLCWNAMKIVN 103 (305)
Q Consensus 91 -~~~~~l~~L~~L~ 103 (305)
.++..+++|+.||
T Consensus 139 ~~i~~~~P~L~~LD 152 (162)
T d1koha1 139 SAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHTTSTTCCEET
T ss_pred HHHHHHCCCCCEEC
Confidence 2244566666665
No 36
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.33 E-value=3.4e-08 Score=87.06 Aligned_cols=84 Identities=17% Similarity=0.089 Sum_probs=51.5
Q ss_pred CEEEcccCccccc-cChhhhcCCCCCEEeccCccccc----CcchhhcCCCCCCEEEcccccceee----eCCCCCCCCC
Q 045166 1 MFYLRNENTFLQR-IPRSLINCSKLEFLGLGINQISD----TFPSWLGTLPKLNVLILRSNIFYGI----IEEPRTSCGF 71 (305)
Q Consensus 1 ~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~~~l 71 (305)
++||+++|++++. +.+-+..++++++|+|++|.++. .++..+..+++|++|||++|.++.. +...+. ...
T Consensus 5 ~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~-~~~ 83 (460)
T d1z7xw1 5 QSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ-TPS 83 (460)
T ss_dssp EEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC-STT
T ss_pred CEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHh-cCC
Confidence 3677888887742 23445667777788888887763 2344556777777777777776421 111220 122
Q ss_pred CCccEEeCCCCccc
Q 045166 72 SKLRIIDLSDNRFT 85 (305)
Q Consensus 72 ~~L~~L~Ls~N~l~ 85 (305)
.+|+.|++++|+++
T Consensus 84 ~~L~~L~L~~n~it 97 (460)
T d1z7xw1 84 CKIQKLSLQNCCLT 97 (460)
T ss_dssp CCCCEEECTTSCCB
T ss_pred CCCCEEECCCCCcc
Confidence 45777777777776
No 37
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.29 E-value=7.6e-08 Score=84.70 Aligned_cols=83 Identities=20% Similarity=0.194 Sum_probs=63.8
Q ss_pred CEEEcccCcccc----ccChhhhcCCCCCEEeccCcccccC----cchhhc-CCCCCCEEEcccccceee----eCCCCC
Q 045166 1 MFYLRNENTFLQ----RIPRSLINCSKLEFLGLGINQISDT----FPSWLG-TLPKLNVLILRSNIFYGI----IEEPRT 67 (305)
Q Consensus 1 ~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~-~l~~L~~L~L~~N~l~~~----~p~~~~ 67 (305)
++|+|++|.++. .++..+..+++|++|||++|.|+.. +...+. ...+|++|+|++|.++.. ++..+
T Consensus 30 ~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l- 108 (460)
T d1z7xw1 30 QVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTL- 108 (460)
T ss_dssp SEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHT-
T ss_pred CEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCccccccccccchh-
Confidence 579999999873 4566778999999999999998642 222222 235799999999998743 33445
Q ss_pred CCCCCCccEEeCCCCccc
Q 045166 68 SCGFSKLRIIDLSDNRFT 85 (305)
Q Consensus 68 ~~~l~~L~~L~Ls~N~l~ 85 (305)
..+++|++|++++|.++
T Consensus 109 -~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 109 -RTLPTLQELHLSDNLLG 125 (460)
T ss_dssp -TSCTTCCEEECCSSBCH
T ss_pred -hccccccccccccccch
Confidence 67899999999999997
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.22 E-value=9.7e-08 Score=72.56 Aligned_cols=75 Identities=20% Similarity=0.168 Sum_probs=58.5
Q ss_pred CEEEcccCccccc--cChhhhcCCCCCEEeccCcccccCcch-hhcCCCCCCEEEcccccceeeeCCC-------CCCCC
Q 045166 1 MFYLRNENTFLQR--IPRSLINCSKLEFLGLGINQISDTFPS-WLGTLPKLNVLILRSNIFYGIIEEP-------RTSCG 70 (305)
Q Consensus 1 ~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~-------~~~~~ 70 (305)
++|||++|+++.. ++..+..+++|+.|+|++|.|+. +++ .+....+|+.|++++|.+....... + ..
T Consensus 68 ~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~-l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~--~~ 144 (162)
T d1koha1 68 LSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS-ERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIR--ER 144 (162)
T ss_dssp CCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCC-GGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHH--TT
T ss_pred CEeeCCCccccCCchhHHHHhhCCcccccccccCcccc-chhhhhhhccccceeecCCCCcCcCcccchhHHHHHH--HH
Confidence 4689999999853 35667889999999999999997 444 4445668999999999997644321 2 46
Q ss_pred CCCccEEe
Q 045166 71 FSKLRIID 78 (305)
Q Consensus 71 l~~L~~L~ 78 (305)
+|+|+.||
T Consensus 145 ~P~L~~LD 152 (162)
T d1koha1 145 FPKLLRLD 152 (162)
T ss_dssp STTCCEET
T ss_pred CCCCCEEC
Confidence 89999987
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.55 E-value=1.2e-05 Score=60.86 Aligned_cols=67 Identities=10% Similarity=0.060 Sum_probs=44.4
Q ss_pred hcCCCCCEEeccCc-ccccC----cchhhcCCCCCCEEEcccccceeeeCCCCC--CCCCCCccEEeCCCCccc
Q 045166 19 INCSKLEFLGLGIN-QISDT----FPSWLGTLPKLNVLILRSNIFYGIIEEPRT--SCGFSKLRIIDLSDNRFT 85 (305)
Q Consensus 19 ~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~~~l~~L~~L~Ls~N~l~ 85 (305)
.+.++|++|+|+++ .++.. +-..+...+.|++|+|++|.+.......++ ....+.|+.|++++|.++
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~ 85 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 85 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcc
Confidence 45688999999874 46432 223455678899999999888643222220 023467888999988887
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.39 E-value=5.3e-05 Score=57.16 Aligned_cols=103 Identities=17% Similarity=0.106 Sum_probs=69.8
Q ss_pred CEEEcccC-ccccc----cChhhhcCCCCCEEeccCcccccC----cchhhcCCCCCCEEEcccccceeee----CCCCC
Q 045166 1 MFYLRNEN-TFLQR----IPRSLINCSKLEFLGLGINQISDT----FPSWLGTLPKLNVLILRSNIFYGII----EEPRT 67 (305)
Q Consensus 1 ~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----p~~~~ 67 (305)
+.|+|+++ .++.. +-..+...++|++|+|++|.+... +...+...+.|++|+|++|.++..- -..+
T Consensus 18 ~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL- 96 (167)
T d1pgva_ 18 KEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRST- 96 (167)
T ss_dssp CEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHT-
T ss_pred cEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHH-
Confidence 47899874 56532 344677789999999999999742 3334556789999999999987521 1123
Q ss_pred CCCCCCccEEeCCCCcccccCCh-------hhhhCcccchhccCcc
Q 045166 68 SCGFSKLRIIDLSDNRFTGKLPS-------NSFLCWNAMKIVNTSA 106 (305)
Q Consensus 68 ~~~l~~L~~L~Ls~N~l~g~lp~-------~~~~~l~~L~~L~l~~ 106 (305)
...++|+.|++++|.+. .+.. ..+..-++|+.|+++.
T Consensus 97 -~~n~sL~~L~l~~n~~~-~~g~~~~~~l~~~L~~n~sL~~l~l~~ 140 (167)
T d1pgva_ 97 -LVTQSIVEFKADNQRQS-VLGNQVEMDMMMAIEENESLLRVGISF 140 (167)
T ss_dssp -TTTCCCSEEECCCCSSC-CCCHHHHHHHHHHHHHCSSCCEEECCC
T ss_pred -HhCCcCCEEECCCCcCC-CccHHHHHHHHHHHHhCCCccEeeCcC
Confidence 55678999999999766 3321 1233345666666543
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.92 E-value=6.4e-05 Score=56.53 Aligned_cols=72 Identities=14% Similarity=0.011 Sum_probs=45.7
Q ss_pred cChhhhcCCCCCEEeccC-cccccC----cchhhcCCCCCCEEEcccccceeeeCCCC--CCCCCCCccEEeCCCCccc
Q 045166 14 IPRSLINCSKLEFLGLGI-NQISDT----FPSWLGTLPKLNVLILRSNIFYGIIEEPR--TSCGFSKLRIIDLSDNRFT 85 (305)
Q Consensus 14 ~p~~~~~l~~L~~L~L~~-N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~--~~~~l~~L~~L~Ls~N~l~ 85 (305)
+.....+.++|++|++++ +.++.. +-..+...++|++|++++|.++...-..+ .....++++.+++++|.+.
T Consensus 9 l~~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 9 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 87 (166)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence 344446678899999987 456432 22334567888889999887754211111 0034567888888888776
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.46 E-value=0.0011 Score=49.30 Aligned_cols=103 Identities=12% Similarity=0.010 Sum_probs=68.1
Q ss_pred CEEEccc-Cccccc----cChhhhcCCCCCEEeccCcccccC----cchhhcCCCCCCEEEcccccceeee----CCCCC
Q 045166 1 MFYLRNE-NTFLQR----IPRSLINCSKLEFLGLGINQISDT----FPSWLGTLPKLNVLILRSNIFYGII----EEPRT 67 (305)
Q Consensus 1 ~~L~Ls~-N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----p~~~~ 67 (305)
++|+|++ +.++.. +-.++...++|++|++++|.++.. +-..+...+.++.+++++|.+.... -..+
T Consensus 20 ~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l- 98 (166)
T d1io0a_ 20 EEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEAL- 98 (166)
T ss_dssp CEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGG-
T ss_pred cEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHH-
Confidence 4688887 556532 345566889999999999998753 2234456789999999999885421 1233
Q ss_pred CCCCCCccEEeC--CCCccccc----CChhhhhCcccchhccCcc
Q 045166 68 SCGFSKLRIIDL--SDNRFTGK----LPSNSFLCWNAMKIVNTSA 106 (305)
Q Consensus 68 ~~~l~~L~~L~L--s~N~l~g~----lp~~~~~~l~~L~~L~l~~ 106 (305)
...++|+.++| +.|.+... +. ..+...+.|+.|+++.
T Consensus 99 -~~~~~L~~l~L~l~~n~i~~~~~~~La-~~L~~n~~L~~L~l~~ 141 (166)
T d1io0a_ 99 -QSNTSLIELRIDNQSQPLGNNVEMEIA-NMLEKNTTLLKFGYHF 141 (166)
T ss_dssp -GGCSSCCEEECCCCSSCCCHHHHHHHH-HHHHHCSSCCEEECCC
T ss_pred -HhCccccEEeeccCCCcCcHHHHHHHH-HHHHhCCCcCEEeCcC
Confidence 56678887555 56677521 22 2245667778877654
Done!