Query 045169
Match_columns 192
No_of_seqs 115 out of 701
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 18:32:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045169.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045169hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g4d_A (+)-delta-cadinene synt 100.0 1.8E-65 6.3E-70 478.2 20.7 189 4-192 223-554 (554)
2 3m00_A Aristolochene synthase; 100.0 2.4E-65 8.1E-70 477.1 19.1 189 4-192 219-550 (550)
3 3n0f_A Isoprene synthase; terp 100.0 5.9E-65 2E-69 475.0 21.5 188 4-191 221-551 (555)
4 3sdr_A Alpha-bisabolene syntha 100.0 9.8E-61 3.4E-65 462.5 23.0 185 7-192 486-817 (817)
5 3s9v_A Abietadiene synthase, c 100.0 1.9E-60 6.5E-65 458.9 23.2 184 7-191 458-785 (785)
6 3p5p_A Taxadiene synthase; cla 100.0 1.1E-60 3.8E-65 459.5 20.6 186 6-192 428-756 (764)
7 2ong_A 4S-limonene synthase; m 100.0 2.3E-60 7.7E-65 443.3 19.9 188 4-191 212-543 (543)
8 1n1b_A (+)-bornyl diphosphate 100.0 3.6E-60 1.2E-64 442.5 20.4 188 4-191 218-549 (549)
9 2j5c_A 1,8-cineole synthase; t 100.0 1.2E-59 4E-64 440.7 21.7 188 4-191 239-569 (569)
10 3pya_A ENT-copalyl diphosphate 100.0 8.1E-40 2.8E-44 312.9 14.0 177 6-191 432-720 (727)
11 1di1_A Aristolochene synthase; 99.9 3.2E-22 1.1E-26 170.5 12.3 139 26-167 13-210 (300)
12 1ps1_A Pentalenene synthase; a 99.9 9.9E-23 3.4E-27 176.8 7.8 141 24-165 15-222 (337)
13 3bny_A Aristolochene synthase; 99.9 1.3E-21 4.4E-26 168.6 9.4 139 24-165 25-222 (320)
14 3kb9_A EPI-isozizaene synthase 99.8 1.1E-18 3.9E-23 155.3 10.6 115 29-144 60-216 (382)
15 3v1v_A 2-MIB synthase, 2-methy 98.5 2.9E-06 9.8E-11 77.0 14.1 54 113-166 263-342 (433)
16 1yyq_A Trichodiene synthase; t 75.6 6.4 0.00022 34.6 6.8 77 61-142 87-180 (374)
17 3fx7_A Putative uncharacterize 56.4 19 0.00065 25.8 4.9 24 79-102 4-27 (94)
18 3mtu_A Tropomyosin alpha-1 cha 29.6 24 0.00084 23.9 1.7 19 157-175 57-75 (75)
19 2w9y_A CE-FAR-7, fatty acid/re 22.8 2.4E+02 0.0082 21.4 6.4 61 72-138 34-112 (140)
No 1
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=1.8e-65 Score=478.19 Aligned_cols=189 Identities=46% Similarity=0.758 Sum_probs=175.6
Q ss_pred ccccccHhHHHHHHHhhHHHHHHhHHHHhHhhhh----ccCCCCCccchhhhHHHHHHHHH----------HHHHHHHHH
Q 045169 4 CKKIYNETLLTFAKLASNKLQNLYQKELDDISRI----RLLYKLPFIRERIAKCYFWILGV----------RILTKVVSM 69 (192)
Q Consensus 4 ~~~~~n~~lLelAKldFn~~Q~~hq~El~~lsrW----~~~~~l~f~Rdr~ve~yf~~~~~----------i~~aK~~~l 69 (192)
.++.+|++||||||+|||+||++||+||++++|| ++.++|||+|||+||||||++|+ +++||++++
T Consensus 223 ~~~~~n~~lLelAkldFn~~Q~~hq~El~~l~rWwk~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l 302 (554)
T 3g4d_A 223 DIESHNKALLEFAKIDFNMLQFLHRKELSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAM 302 (554)
T ss_dssp SSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTTCCCCHHHHHHHHHHHCCSGGGHHHHHHHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCCcccCCchHHHHHHHHHHHHHhhCCccccHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999 66689999999999999999999 999999999
Q ss_pred HHHHHHHhhhcCChhhhHHHHHHHH----HHhhhCchhHHHHHHHHH------------------------HHHHHHHHH
Q 045169 70 TSAIDDIYDVYGKIKELEPFTSAIE----SAIDKLPKYMKLCHRGLL------------------------EMKNVVKIY 121 (192)
Q Consensus 70 ~t~lDD~~D~ygt~eEl~~ft~ai~----~~~~~Lp~ymk~~f~~l~------------------------~~~~l~~~y 121 (192)
+|++||+||+|||+|||++||+||+ +++++||+|||+||.+++ +|++++++|
T Consensus 303 ~tviDD~yD~ygTleEl~~ft~ai~RWD~~~~~~LPeymK~~f~al~~~~~e~~~~~~~~~~~~~~~ylk~~w~~l~~ay 382 (554)
T 3g4d_A 303 ASIVDDTYDSYATYEELIPYTNAIERWDIKCIDEIPEYMKPSYKALLDVYEEMVQLVAEHGRQYRVEYAKNAMIRLAQSY 382 (554)
T ss_dssp HHHHHHHHTSSCCHHHHHHHHHHHHHCCGGGGGGSCGGGHHHHHHHHHHHHHHHHHHGGGTCTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCHHHHHHHHHHHHhcCccccccCcHHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 899999999999999999 799999999
Q ss_pred HHHHHHhcCCCccCHHHHHHHHH---------------------------------------------------------
Q 045169 122 FFEAKWYHQNYVSSMKEYMTVAL--------------------------------------------------------- 144 (192)
Q Consensus 122 l~EakW~~~~~~Ps~eEYl~~~~--------------------------------------------------------- 144 (192)
++||||+++||+||+||||+||.
T Consensus 383 l~EAkW~~~gyvPT~EEYl~na~vSsg~~~l~~~~~~~mg~~lt~e~~e~~~~~p~i~~~~~~I~RL~NDI~S~k~E~~r 462 (554)
T 3g4d_A 383 LVEAKWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAASDPKIIQASTIICRFMDDVAEHKFKHRR 462 (554)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHGGGSCHHHHHHHHHHTSCTTSCHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHhcCCCCCHHHHHhccceeehHHHHHHHHHHhcCCCCCHHHHHhccccHHHHHHHHHHHHHhcccchhhhhhcc
Confidence 99999999999999999999998
Q ss_pred -------Hh-------------------------------H------HHHHHHHHHHhhhhhhhcccCCCCCCCchhHHH
Q 045169 145 -------DC-------------------------------L------HPILMGILNLTHAIDVIYKYEDGYTHVGIVLKD 180 (192)
Q Consensus 145 -------ec-------------------------------l------~~~~~~~~n~aR~~~~~Y~~~Dgft~~~~~lkd 180 (192)
+| | +||+++++|+||+++++|++|||||.|+..+|+
T Consensus 463 G~van~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l~~~~~p~~~~~~~~NlaR~~~~~Y~~~Dg~t~~~~~~k~ 542 (554)
T 3g4d_A 463 EDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQEFLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTYVGKAAKG 542 (554)
T ss_dssp --CCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHSCC-----CCCHHHHH
T ss_pred CCccHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCccHHHHH
Confidence 22 2 799999999999999999999999999878999
Q ss_pred HHHHhhhcccCC
Q 045169 181 FVVSLLVNPMPL 192 (192)
Q Consensus 181 ~I~sll~ePv~i 192 (192)
+|++||++|||+
T Consensus 543 ~i~~ll~~Pi~l 554 (554)
T 3g4d_A 543 GITSLLIEPIAL 554 (554)
T ss_dssp HHHHHHTCCCCC
T ss_pred HHHHHhcCCCCC
Confidence 999999999986
No 2
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=2.4e-65 Score=477.10 Aligned_cols=189 Identities=44% Similarity=0.810 Sum_probs=176.2
Q ss_pred ccccccHhHHHHHHHhhHHHHHHhHHHHhHhhhh----ccCCCCCccchhhhHHHHHHHHH----------HHHHHHHHH
Q 045169 4 CKKIYNETLLTFAKLASNKLQNLYQKELDDISRI----RLLYKLPFIRERIAKCYFWILGV----------RILTKVVSM 69 (192)
Q Consensus 4 ~~~~~n~~lLelAKldFn~~Q~~hq~El~~lsrW----~~~~~l~f~Rdr~ve~yf~~~~~----------i~~aK~~~l 69 (192)
.++.+|++||||||+|||+||++||+||++++|| ++.++|||+|||+||||||++|+ +++||++++
T Consensus 219 ~~~~~n~~lLelAkldFn~~Q~~hq~EL~~l~rWwk~~~l~~~l~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l 298 (550)
T 3m00_A 219 KEQSKNNVLLRFAKLDFNLLQMLHKQELAQVSRWWKDLDFVTTLPYARDRVVECYFWTLGVYFEPQYSQARVMLVKTISM 298 (550)
T ss_dssp GCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHSTTSCCCHHHHHHHHHHHCCSGGGHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCccccCcHHHhHHHHHHHHHHhhCCccchHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999 66689999999999999999999 999999999
Q ss_pred HHHHHHHhhhcCChhhhHHHHHHHH----HHhhhCchhHHHHHHHHH------------------------HHHHHHHHH
Q 045169 70 TSAIDDIYDVYGKIKELEPFTSAIE----SAIDKLPKYMKLCHRGLL------------------------EMKNVVKIY 121 (192)
Q Consensus 70 ~t~lDD~~D~ygt~eEl~~ft~ai~----~~~~~Lp~ymk~~f~~l~------------------------~~~~l~~~y 121 (192)
+|++||+||+|||+|||++||+||+ +++++||+|||+||.+++ +|++++++|
T Consensus 299 ~tviDD~yD~ygTleEl~~ft~ai~RWD~~~~~~LPeymK~~f~al~~~~~E~~~~~~~~~~~~~~~ylk~~w~~l~~ay 378 (550)
T 3m00_A 299 ISIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIERMKEIVRNY 378 (550)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHCCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHTTTCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccccCCHHHHHHHHHHHHhcCccccccCcHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 899999999999999999 799999999
Q ss_pred HHHHHHhcCCCccCHHHHHHHHH---------------------------------------------------------
Q 045169 122 FFEAKWYHQNYVSSMKEYMTVAL--------------------------------------------------------- 144 (192)
Q Consensus 122 l~EakW~~~~~~Ps~eEYl~~~~--------------------------------------------------------- 144 (192)
++||||+++||+||+||||+||.
T Consensus 379 l~EAkW~~~gyvPT~EEYl~na~vSsg~~~l~~~~f~g~~~lt~e~~e~~~~~p~i~~~~~~I~RL~NDI~S~k~E~~rG 458 (550)
T 3m00_A 379 NVESTWFIEGYTPPVSEYLSNALATTTYYLLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRG 458 (550)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHTGGGSHHHHHHHHHHTCTTCCHHHHHHHHTCCHHHHHHHHHHHHHHHHHSHHHHHHTT
T ss_pred HHHHHHHhcCCCCCHHHHHHhccccchHHHHHHHHHHcCCCCcHHHHHhhcccHHHHHHHhhhheeeccchhHHHHHhcC
Confidence 99999999999999999999998
Q ss_pred ------Hh-------------------------------H------HHHHHHHHHHhhhhhhhcccC-CCCCCCchhHHH
Q 045169 145 ------DC-------------------------------L------HPILMGILNLTHAIDVIYKYE-DGYTHVGIVLKD 180 (192)
Q Consensus 145 ------ec-------------------------------l------~~~~~~~~n~aR~~~~~Y~~~-Dgft~~~~~lkd 180 (192)
+| | +||+++++|+||+++++|++| ||||.|++.+|+
T Consensus 459 ~vas~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l~~~~~p~~~~~~~~NlaR~~~~~Y~~~~Dg~t~~~~~~k~ 538 (550)
T 3m00_A 459 QIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIIEVTYIHNLDGYTHPEKVLKP 538 (550)
T ss_dssp CTTSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTSSSCSSCGGGTHHHHHHHHHHHHHTSCC-----CCHHHHHH
T ss_pred CcccHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCCccHHHHH
Confidence 22 1 789999999999999999998 999999878999
Q ss_pred HHHHhhhcccCC
Q 045169 181 FVVSLLVNPMPL 192 (192)
Q Consensus 181 ~I~sll~ePv~i 192 (192)
+|++||++|||+
T Consensus 539 ~i~~ll~~Pi~~ 550 (550)
T 3m00_A 539 HIINLLVDSIKI 550 (550)
T ss_dssp HHHHHHTCCCCC
T ss_pred HHHHHhhCCCCC
Confidence 999999999986
No 3
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=5.9e-65 Score=474.99 Aligned_cols=188 Identities=36% Similarity=0.641 Sum_probs=176.5
Q ss_pred ccccccHhHHHHHHHhhHHHHHHhHHHHhHhhhh----ccCCCCCccchhhhHHHHHHHHH----------HHHHHHHHH
Q 045169 4 CKKIYNETLLTFAKLASNKLQNLYQKELDDISRI----RLLYKLPFIRERIAKCYFWILGV----------RILTKVVSM 69 (192)
Q Consensus 4 ~~~~~n~~lLelAKldFn~~Q~~hq~El~~lsrW----~~~~~l~f~Rdr~ve~yf~~~~~----------i~~aK~~~l 69 (192)
.++.+|++||||||||||+||++||+||++++|| ++.++|||+|||+||||||++|+ +++||++++
T Consensus 221 ~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l~~~l~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l 300 (555)
T 3n0f_A 221 KKEDANQVLLELAILDYNMIQSVYQRDLRETSRWWRRVGLATKLHFARDRLIESFYWAVGVAFEPQYSDCRNSVAKMFSF 300 (555)
T ss_dssp TCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTTCCCCHHHHHHHHHHHCCSGGGHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHcCCcccCCchhhHHHHHHHHHHHhhcCccchHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999 66689999999999999999999 999999999
Q ss_pred HHHHHHHhhhcCChhhhHHHHHHHH----HHhhhCchhHHHHHHHHH------------------------HHHHHHHHH
Q 045169 70 TSAIDDIYDVYGKIKELEPFTSAIE----SAIDKLPKYMKLCHRGLL------------------------EMKNVVKIY 121 (192)
Q Consensus 70 ~t~lDD~~D~ygt~eEl~~ft~ai~----~~~~~Lp~ymk~~f~~l~------------------------~~~~l~~~y 121 (192)
+|++||+||+|||+|||++||+||+ +++++||+|||+||.+++ +|++++++|
T Consensus 301 ~tviDD~yD~ygt~eEl~~ft~ai~RWD~~~~~~LPeymk~~~~aL~~~~~e~~~~~~~~~g~~~~~~l~~~w~~l~~ay 380 (555)
T 3n0f_A 301 VTIIDDIYDVYGTLDELELFTDAVERWDVNAINDLPDYMKLCFLALYNTINEIAYDNLKDKGENILPYLTKAWADLCNAF 380 (555)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHTCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccCCHHHHHHHHHHHHhcCccccccCcHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 799999999999999999 899999999
Q ss_pred HHHHHHhcCCCccCHHHHHHHHH---------------------------------------------------------
Q 045169 122 FFEAKWYHQNYVSSMKEYMTVAL--------------------------------------------------------- 144 (192)
Q Consensus 122 l~EakW~~~~~~Ps~eEYl~~~~--------------------------------------------------------- 144 (192)
++||+|+++||+||+||||+||.
T Consensus 381 l~EAkW~~~gyvPT~EEYl~na~vSsg~~~l~~~~~~~mg~~lt~e~~e~~~~~p~i~~~~~~i~RL~NDi~S~~~E~~r 460 (555)
T 3n0f_A 381 LQEAKWLYNKSTPTFDDYFGNAWKSSSGPLQLIFAYFAVVQNIKKEEIENLQKYHDIISRPSHIFRLCNDLASASAEIAR 460 (555)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHTSHHHHHHHHHHHHCSSCCHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHccCCCCCHHHHHHhcccchhHHHHHHHHHHhcCCCCCHHHHHhcccchHHHHHHHHHHHHhccchhhhhhhhc
Confidence 99999999999999999999998
Q ss_pred -------Hh-------------------------------H------HHHHHHHHHHhhhhhhhcccCCCCCCCchhHHH
Q 045169 145 -------DC-------------------------------L------HPILMGILNLTHAIDVIYKYEDGYTHVGIVLKD 180 (192)
Q Consensus 145 -------ec-------------------------------l------~~~~~~~~n~aR~~~~~Y~~~Dgft~~~~~lkd 180 (192)
+| | +||+++++|+||+++++|++|||||.|+.++|+
T Consensus 461 G~vas~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l~~~~~p~~~~~~~~n~aR~~~~~Y~~~Dg~t~~~~~~k~ 540 (555)
T 3n0f_A 461 GETANSVSCYMRTKGISEELATESVMNLIDETWKKMNKEKLGGSLFAKPFVETAINLARQSHCTYHNGDAHTSPDELTRK 540 (555)
T ss_dssp TCCCSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHSCCC---CCHHHHHHH
T ss_pred CCcchHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCccHHHHH
Confidence 22 2 799999999999999999999999999778999
Q ss_pred HHHHhhhcccC
Q 045169 181 FVVSLLVNPMP 191 (192)
Q Consensus 181 ~I~sll~ePv~ 191 (192)
+|++||++|||
T Consensus 541 ~i~~ll~~Pi~ 551 (555)
T 3n0f_A 541 RVLSVITEPIL 551 (555)
T ss_dssp HHHHHTTSCCC
T ss_pred HHHHHHhcCCC
Confidence 99999999996
No 4
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=9.8e-61 Score=462.48 Aligned_cols=185 Identities=32% Similarity=0.599 Sum_probs=176.5
Q ss_pred cccHhHHHHHHHhhHHHHHHhHHHHhHhhhh----ccCCCCCccchhhhHHHHHHHHH----------HHHHHHHHHHHH
Q 045169 7 IYNETLLTFAKLASNKLQNLYQKELDDISRI----RLLYKLPFIRERIAKCYFWILGV----------RILTKVVSMTSA 72 (192)
Q Consensus 7 ~~n~~lLelAKldFn~~Q~~hq~El~~lsrW----~~~~~l~f~Rdr~ve~yf~~~~~----------i~~aK~~~l~t~ 72 (192)
.+|++||||||||||+||++||+||++++|| ++ .+|||+|||+||||||++|+ +++||+++++|+
T Consensus 486 ~~n~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l-~~l~faRdr~ve~Yfw~~~~~feP~~s~~R~~~aK~~~l~tv 564 (817)
T 3sdr_A 486 VNNEKFLELGKLDFNIIQSIHQEEMKNVTSWFRDSGL-PLFTFARERPLEFYFLVAAGTYEPQYAKCRFLFTKVACLQTV 564 (817)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSG-GGCTTSCCCHHHHHHHHHTTSCCGGGHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhhhhhceeHHhcCC-CcCccHHHHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHH
Confidence 4699999999999999999999999999999 55 69999999999999999998 999999999999
Q ss_pred HHHHhhhcCChhhhHHHHHHHH----HHhhhCchhHHHHHHHHH------------------------HHHHHHHHHHHH
Q 045169 73 IDDIYDVYGKIKELEPFTSAIE----SAIDKLPKYMKLCHRGLL------------------------EMKNVVKIYFFE 124 (192)
Q Consensus 73 lDD~~D~ygt~eEl~~ft~ai~----~~~~~Lp~ymk~~f~~l~------------------------~~~~l~~~yl~E 124 (192)
+||+||+|||+|||++||+||+ +++++||+|||+||.+++ +|++++++|++|
T Consensus 565 iDD~yD~ygT~eEl~~ft~ai~RWD~~~~~~LPeymk~~~~aL~~~~~e~~~~~~~~~g~~~~~~l~~aw~~l~~ayl~E 644 (817)
T 3sdr_A 565 LDDMYDTYGTLDELKLFTEAVRRWDLSFTENLPDYMKLCYQIYYDIVHEVAWEAEKEQGRELVSFFRKGWEDYLLGYYEE 644 (817)
T ss_dssp HHHHHHTTSCHHHHHHHHHHHHHTCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcccCCCHHHHHHHHHHHHHcCchhhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 789999999999999999 799999999999
Q ss_pred HHHhcCCCccCHHHHHHHHH------------------------------------------------------------
Q 045169 125 AKWYHQNYVSSMKEYMTVAL------------------------------------------------------------ 144 (192)
Q Consensus 125 akW~~~~~~Ps~eEYl~~~~------------------------------------------------------------ 144 (192)
|||+++||+||+||||+||.
T Consensus 645 AkW~~~gyvPt~eEYl~na~vS~g~~~ll~~~~~~~~g~~lt~e~~e~~~~~s~p~l~~~~~~I~RL~NDi~S~k~E~~r 724 (817)
T 3sdr_A 645 AEWLAAEYVPTLDEYIKNGITSIGQRILLLSGVLIMDGQLLSQEALEKVDYPGRRVLTELNSLISRLADDTKTYKAEKAR 724 (817)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHTCHHHHHHHHHTTCTTCCCCHHHHHTTCCTTSCSHHHHHHHHHHHHHHHHSSCC----
T ss_pred HHHHhcCCCCCHHHHHHhccccccccHHHHHHHHHHcCCCCCHHHHhcccccchHHHHHHHHHHHHHhccchHHHHHHhc
Confidence 99999999999999999987
Q ss_pred -------Hh--------------------------------H------HHHHHHHHHHhhhhhhhcccCCCCCCCchhHH
Q 045169 145 -------DC--------------------------------L------HPILMGILNLTHAIDVIYKYEDGYTHVGIVLK 179 (192)
Q Consensus 145 -------ec--------------------------------l------~~~~~~~~n~aR~~~~~Y~~~Dgft~~~~~lk 179 (192)
+| | ++++++++|+||+++++|+++||||+|+.++|
T Consensus 725 G~~assV~cYMke~~gvS~EeA~~~i~~~Ie~~wKeln~e~l~~~~~p~~~~~~~ln~aR~~~~~Y~~~Dg~t~~~~~~k 804 (817)
T 3sdr_A 725 GELASSIECYMKDHPECTEEEALDHIYSILEPAVKELTREFLKPDDVPFACKKMLFEETRVTMVIFKDGDGFGVSKLEVK 804 (817)
T ss_dssp --CCCHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHTCSCCSSCCCHHHHH
T ss_pred CCcchHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCchHHHH
Confidence 22 2 78999999999999999999999999987899
Q ss_pred HHHHHhhhcccCC
Q 045169 180 DFVVSLLVNPMPL 192 (192)
Q Consensus 180 d~I~sll~ePv~i 192 (192)
++|+++|++||++
T Consensus 805 ~~i~~ll~~pi~l 817 (817)
T 3sdr_A 805 DHIKECLIEPLPL 817 (817)
T ss_dssp HHHHHHHTCCCCC
T ss_pred HHHHHHhcCCCCC
Confidence 9999999999985
No 5
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=100.00 E-value=1.9e-60 Score=458.92 Aligned_cols=184 Identities=33% Similarity=0.549 Sum_probs=170.6
Q ss_pred cccHhHHHHHHHhhHHHHHHhHHHHhHhhhh----ccCCCCCccchhhhHHHHHHHHH----------HHHHHHHHHHHH
Q 045169 7 IYNETLLTFAKLASNKLQNLYQKELDDISRI----RLLYKLPFIRERIAKCYFWILGV----------RILTKVVSMTSA 72 (192)
Q Consensus 7 ~~n~~lLelAKldFn~~Q~~hq~El~~lsrW----~~~~~l~f~Rdr~ve~yf~~~~~----------i~~aK~~~l~t~ 72 (192)
.+|++||||||+|||+||++||+||++++|| ++ ++|||+|||+||||||++|+ +++||+++++|+
T Consensus 458 ~~n~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l-~~l~faRdr~ve~Yfw~~~~~feP~~s~~R~~~aK~~~l~tv 536 (785)
T 3s9v_A 458 ISNEKYLELAKLDFNKVQSIHQTELQDLRRWWKSSGF-TDLNFTRERVTEIYFSPASFIFEPEFSKCREVYTKTSNFTVI 536 (785)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-TSCSSSCCCHHHHHHHHHHHSCSGGGHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHcCC-CcCccHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHH
Confidence 3699999999999999999999999999999 55 79999999999999999999 999999999999
Q ss_pred HHHHhhhcCChhhhHHHHHHHH----HHhhhCchhHHHHHHHHH------------------------HHHHHHHHHHHH
Q 045169 73 IDDIYDVYGKIKELEPFTSAIE----SAIDKLPKYMKLCHRGLL------------------------EMKNVVKIYFFE 124 (192)
Q Consensus 73 lDD~~D~ygt~eEl~~ft~ai~----~~~~~Lp~ymk~~f~~l~------------------------~~~~l~~~yl~E 124 (192)
+||+||+|||+|||++||+||+ +++++||+|||+||.+++ +|++++++|++|
T Consensus 537 iDD~yD~ygT~eEl~~ft~ai~RWD~~~~~~Lpeymk~~f~aL~~~~nei~~~~~~~~g~~~~~ylk~aw~~l~~ayl~E 616 (785)
T 3s9v_A 537 LDDLYDAHGSLDDLKLFTESVKRWDLSLVDQMPQQMKICFVGFYNTFNDIAKEGRERQGRDVLGYIQNVWKVQLEAYTKE 616 (785)
T ss_dssp HHHHHTSCCCHHHHHHHHHHHHHTSSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCCHHHHHHHHHHHHHcCchhhhcCChhHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 789999999999999999 799999999999
Q ss_pred HHHhcCCCccCHHHHHHHHH------------------------------------------------------------
Q 045169 125 AKWYHQNYVSSMKEYMTVAL------------------------------------------------------------ 144 (192)
Q Consensus 125 akW~~~~~~Ps~eEYl~~~~------------------------------------------------------------ 144 (192)
|+|+++||+||+||||+||.
T Consensus 617 AkW~~~gyvPT~eEYl~na~vS~g~~~l~~~~~~~~G~~lt~e~~e~~~~~~~l~~~~~~I~RL~NDi~S~k~E~~rG~~ 696 (785)
T 3s9v_A 617 AEWSEAKYVPSFNEYIENASVSIALGTVVLISALFTGEVLTDEVLSKIDRESRFLQLMGLTGRLVNDTKTYQAERGQGEV 696 (785)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHTCHHHHHHHHTTCSSSCCCHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHhcCCCCCHHHHHHhccccchHHHHHHHHHHHcCCCCCHHHHhcccccHHHHHHHHHHHHHhcccchhhHHHhcCCc
Confidence 99999999999999999997
Q ss_pred ----Hh--------------------------------H-----HHHHHHHHHHhhhhhhhcccCCCCCCCch-hHHHHH
Q 045169 145 ----DC--------------------------------L-----HPILMGILNLTHAIDVIYKYEDGYTHVGI-VLKDFV 182 (192)
Q Consensus 145 ----ec--------------------------------l-----~~~~~~~~n~aR~~~~~Y~~~Dgft~~~~-~lkd~I 182 (192)
+| | ++++++++|+||+++++|+++||||.|+. ++|++|
T Consensus 697 as~V~cYMke~~gvSeEeA~~~i~~~Ie~~wKeln~e~l~~~~p~~~~~~~~n~aR~~~~~Y~~~Dg~t~~~~~~~k~~i 776 (785)
T 3s9v_A 697 ASAIQCYMKDHPKISEEEALQHVYSVMENALEELNREFVNNKIPDIYKRLVFETARIMQLFYMQGDGLTLSHDMEIKEHV 776 (785)
T ss_dssp CSHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTCCCC----CHHHHHHHHH
T ss_pred chHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHH
Confidence 22 2 57899999999999999999999999975 799999
Q ss_pred HHhhhcccC
Q 045169 183 VSLLVNPMP 191 (192)
Q Consensus 183 ~sll~ePv~ 191 (192)
+++|++||.
T Consensus 777 ~~ll~~Pi~ 785 (785)
T 3s9v_A 777 KNCLFQPVA 785 (785)
T ss_dssp HHHHTSCCC
T ss_pred HHHhcccCC
Confidence 999999983
No 6
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=1.1e-60 Score=459.50 Aligned_cols=186 Identities=26% Similarity=0.520 Sum_probs=169.3
Q ss_pred ccccHhHHHHHHHhhHHHHHHhHHHHhHhhhh----ccCCCCCccchhhhHHHHHHHHH--------HHHHHHHHHHHHH
Q 045169 6 KIYNETLLTFAKLASNKLQNLYQKELDDISRI----RLLYKLPFIRERIAKCYFWILGV--------RILTKVVSMTSAI 73 (192)
Q Consensus 6 ~~~n~~lLelAKldFn~~Q~~hq~El~~lsrW----~~~~~l~f~Rdr~ve~yf~~~~~--------i~~aK~~~l~t~l 73 (192)
..+|++||||||+|||+||++||+||++++|| ++ .+|||+|||+||||||++|. +++||+++++|++
T Consensus 428 ~~~n~~lLelAKlDFN~~Q~~hq~EL~~l~rWwk~~~l-~~l~faRdr~ve~Yfw~~~feP~~s~~R~~~aK~~~l~tvi 506 (764)
T 3p5p_A 428 SLSNSKCLELAKLDFNIVQSLHQEELKLLTRWWKESGM-ADINFTRHRVAEVYFSSATFEPEYSATRIAFTKIGCLQVLF 506 (764)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTST-TTTTCCHHHHHHHHHHTCCCCGGGHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHhHHHhhhhceeHHhcCC-CcCccHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHH
Confidence 34699999999999999999999999999999 55 79999999999999999875 9999999999999
Q ss_pred HHHhhhcCChhhhHHHHHHHH----HHhhhCchhHHHHHHHHH------------------------HHHHHHHHHHHHH
Q 045169 74 DDIYDVYGKIKELEPFTSAIE----SAIDKLPKYMKLCHRGLL------------------------EMKNVVKIYFFEA 125 (192)
Q Consensus 74 DD~~D~ygt~eEl~~ft~ai~----~~~~~Lp~ymk~~f~~l~------------------------~~~~l~~~yl~Ea 125 (192)
||+||+|||+|||++||+||+ +++++||+|||+||.+++ +|++++++|++||
T Consensus 507 DD~yD~ygT~eEl~~ft~ai~RWD~~~~~~LPeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~yl~~aw~~l~~ayl~EA 586 (764)
T 3p5p_A 507 DDMADIFATLDELKSFTEGVKRWDTSLLHEIPECMQTCFKVWFKLMEEVNNDVVKVQGRDMLAHIRKPWELYFNCYVQER 586 (764)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHTSSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcccCCCHHHHHHHHHHHHHcCchhhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 789999999999999999 7999999999999
Q ss_pred HHhcCCCccCHHHHHHHHH-------------------------------------------------------------
Q 045169 126 KWYHQNYVSSMKEYMTVAL------------------------------------------------------------- 144 (192)
Q Consensus 126 kW~~~~~~Ps~eEYl~~~~------------------------------------------------------------- 144 (192)
||+++||+||+||||+||.
T Consensus 587 kW~~~gyvPT~eEYl~na~vSsg~~~l~~~~~~~~G~~lt~e~~e~~~~~~~l~~~~~~I~RL~NDi~S~k~E~~rG~~a 666 (764)
T 3p5p_A 587 EWLEAGYIPTFEEYLKTYAISVGLGPCTLQPILLMGELVKDDVVEKVHYPSNMFELVSLSWRLTNDTKTYQAEKARGQQA 666 (764)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHTCHHHHHHHHHHTSSSCCCGGGHHHHSTTSHHHHHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHhcCCCCCHHHHHHhcchhchHHHHHHHHHHHcCCCCcHHHHhhhhhhHHHHHHHHHHHHhhhcccchHHHHhcCCcc
Confidence 9999999999999999998
Q ss_pred ---Hh--------------------------------H-------HHHHHHHHHHhhhhhhhcccCCCCCCCchhHHHHH
Q 045169 145 ---DC--------------------------------L-------HPILMGILNLTHAIDVIYKYEDGYTHVGIVLKDFV 182 (192)
Q Consensus 145 ---ec--------------------------------l-------~~~~~~~~n~aR~~~~~Y~~~Dgft~~~~~lkd~I 182 (192)
+| | ++++++++|+||+++++|+++||||.|+.++|++|
T Consensus 667 s~V~cYMke~~gvSeEeA~~~i~~~Ie~~wKeln~e~l~~~~~~p~~~~~~~~n~aR~~~~~Y~~~Dg~t~~~~~~k~~i 746 (764)
T 3p5p_A 667 SGIACYMKDNPGATEEDAIKHICRVVDRALKEASFEYFKPSNDIPMGCKSFIFNLRLCVQIFYKFIDGYGIANEEIKDYI 746 (764)
T ss_dssp SHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCHHHHHHHHHTHHHHHHHSCC-------CCCHHHHH
T ss_pred hHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHH
Confidence 22 2 78999999999999999999999999986799999
Q ss_pred HHhhhcccCC
Q 045169 183 VSLLVNPMPL 192 (192)
Q Consensus 183 ~sll~ePv~i 192 (192)
+++|++||++
T Consensus 747 ~~ll~~Pi~~ 756 (764)
T 3p5p_A 747 RKVYIDPIQV 756 (764)
T ss_dssp HHHHTCCCCC
T ss_pred HHHHhcCCcc
Confidence 9999999975
No 7
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=2.3e-60 Score=443.35 Aligned_cols=188 Identities=32% Similarity=0.600 Sum_probs=178.6
Q ss_pred ccccccHhHHHHHHHhhHHHHHHhHHHHhHhhhh----ccCCCCCccchhhhHHHHHHHHH----------HHHHHHHHH
Q 045169 4 CKKIYNETLLTFAKLASNKLQNLYQKELDDISRI----RLLYKLPFIRERIAKCYFWILGV----------RILTKVVSM 69 (192)
Q Consensus 4 ~~~~~n~~lLelAKldFn~~Q~~hq~El~~lsrW----~~~~~l~f~Rdr~ve~yf~~~~~----------i~~aK~~~l 69 (192)
.++++|++||||||+|||+||++||+||++++|| ++.++|||+|||++|||||++|+ +++||++++
T Consensus 212 ~~~~~n~~lLelAkldFn~~Q~~hq~El~~l~rWwk~~~l~~kl~faRdR~ve~Yfw~~a~~feP~~s~~Rl~~aK~~~l 291 (543)
T 2ong_A 212 KRPDMNPVVLELAILDLNIVQAQFQEELKESFRWWRNTGFVEKLPFARDRLVECYFWNTGIIEPRQHASARIMMGKVNAL 291 (543)
T ss_dssp TCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSCSSCCCHHHHHHTHHHHTCSTTCHHHHHHHHHHHHH
T ss_pred cCccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCcccccHHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999 77778999999999999999998 899999999
Q ss_pred HHHHHHHhhhcCChhhhHHHHHHHH----HHhhhCchhHHHHHHHHH------------------------HHHHHHHHH
Q 045169 70 TSAIDDIYDVYGKIKELEPFTSAIE----SAIDKLPKYMKLCHRGLL------------------------EMKNVVKIY 121 (192)
Q Consensus 70 ~t~lDD~~D~ygt~eEl~~ft~ai~----~~~~~Lp~ymk~~f~~l~------------------------~~~~l~~~y 121 (192)
++++||+||+|||+||++.||+||+ +++++||+|||+||.+++ +|++++++|
T Consensus 292 itviDD~fD~~gt~eEl~~ft~ai~rWD~~~~~~lPeymk~~~~aL~~~~~ei~~~~~~~~~~~~~~~l~~~w~~l~~ay 371 (543)
T 2ong_A 292 ITVIDDIYDVYGTLEELEQFTDLIRRWDINSIDQLPDYMQLCFLALNNFVDDTSYDVMKEKGVNVIPYLRQSWVDLADKY 371 (543)
T ss_dssp HHHHHHHHHSSSCHHHHHHHHHHHHTTCSSTTTTSCSHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHhcCccccccCCchhHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 789999999999999999 799999999
Q ss_pred HHHHHHhcCCCccCHHHHHHHHH---------------------------------------------------------
Q 045169 122 FFEAKWYHQNYVSSMKEYMTVAL--------------------------------------------------------- 144 (192)
Q Consensus 122 l~EakW~~~~~~Ps~eEYl~~~~--------------------------------------------------------- 144 (192)
++||+|+++||+||+||||+||.
T Consensus 372 l~EAkW~~~g~vPt~eEYl~~~~vS~g~~~l~~~~~~~~g~~~t~e~~e~~~~~p~i~~~~~~i~RL~NDi~S~~~E~~r 451 (543)
T 2ong_A 372 MVEARWFYGGHKPSLEEYLENSWQSISGPCMLTHIFFRVTDSFTKETVDSLYKYHDLVRWSSFVLRLADDLGTSVEEVSR 451 (543)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHTCHHHHHHHHHHHHSSCCCHHHHHHHTTTCHHHHHHHHHHHHHHHHHSSHHHHHT
T ss_pred HHHHHHHHcCCCCCHHHHHhcccccchHHHHHHHHHHHcCCCCCHHHHHHhcccHHHHHHHHHHHHHhcccchhhhcccc
Confidence 99999999999999999999998
Q ss_pred --------------------------------------Hh-H------HHHHHHHHHHhhhhhhhcccCCCCCCCchhHH
Q 045169 145 --------------------------------------DC-L------HPILMGILNLTHAIDVIYKYEDGYTHVGIVLK 179 (192)
Q Consensus 145 --------------------------------------ec-l------~~~~~~~~n~aR~~~~~Y~~~Dgft~~~~~lk 179 (192)
+| | ++++++++|+||+++++|+++||||+|++.+|
T Consensus 452 G~~~n~V~cyMke~g~s~eeA~~~i~~~ie~~wk~ln~e~~l~~~~vp~~~~~~~~n~aR~~~~~Y~~~D~~t~~~~~~k 531 (543)
T 2ong_A 452 GDVPKSLQCYMSDYNASEAEARKHVKWLIAEVWKKMNAERVSKDSPFGKDFIGCAVDLGRMAQLMYHNGDGHGTQHPIIH 531 (543)
T ss_dssp SCCCCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHTCSSCSSCHHHHHHHHHHHHHHHHHTSSCSTTSSSCTTHH
T ss_pred CCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHeehhheeCCCCCCCccHHHH
Confidence 33 3 68899999999999999999999999987899
Q ss_pred HHHHHhhhcccC
Q 045169 180 DFVVSLLVNPMP 191 (192)
Q Consensus 180 d~I~sll~ePv~ 191 (192)
++|++||++|||
T Consensus 532 ~~i~~l~~~pi~ 543 (543)
T 2ong_A 532 QQMTRTLFEPFA 543 (543)
T ss_dssp HHHHHHHTSCC-
T ss_pred HHHHHHhccCCC
Confidence 999999999996
No 8
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=3.6e-60 Score=442.52 Aligned_cols=188 Identities=36% Similarity=0.705 Sum_probs=175.3
Q ss_pred ccccccHhHHHHHHHhhHHHHHHhHHHHhHhhhh----ccCCCCCccchhhhHHHHHHHHH----------HHHHHHHHH
Q 045169 4 CKKIYNETLLTFAKLASNKLQNLYQKELDDISRI----RLLYKLPFIRERIAKCYFWILGV----------RILTKVVSM 69 (192)
Q Consensus 4 ~~~~~n~~lLelAKldFn~~Q~~hq~El~~lsrW----~~~~~l~f~Rdr~ve~yf~~~~~----------i~~aK~~~l 69 (192)
.++++|++||||||+|||+||++||+||++++|| ++.++|||+|||++|||||++|+ +++||++++
T Consensus 218 ~~~~~n~~lLelAkldFn~~Q~~hq~El~~l~rWwke~~l~~kl~faRdR~ve~Yfw~~a~~feP~~s~~Rl~~aK~~~l 297 (549)
T 1n1b_A 218 RRPDMNPLIFELAKLNFNIIQATHQQELKDLSRWWSRLCFPEKLPFVRDRLVESFFWAVGMFEPHQHGYQRKMAATIIVL 297 (549)
T ss_dssp HCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCTTSCCCHHHHHHHHHHHCCSTTCHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 3567999999999999999999999999999999 77778999999999999999998 899999999
Q ss_pred HHHHHHHhhhcCChhhhHHHHHHHH----HHhhhCchhHHHHHHHHH------------------------HHHHHHHHH
Q 045169 70 TSAIDDIYDVYGKIKELEPFTSAIE----SAIDKLPKYMKLCHRGLL------------------------EMKNVVKIY 121 (192)
Q Consensus 70 ~t~lDD~~D~ygt~eEl~~ft~ai~----~~~~~Lp~ymk~~f~~l~------------------------~~~~l~~~y 121 (192)
++++||+||+|||+||++.||+||+ ++++++|+|||+||.+++ +|++++++|
T Consensus 298 ~tviDD~yD~~gt~eEl~~ft~ai~rWD~~~~~~lPeymk~~~~aL~d~~~ei~~~~~~~~~~~~~~~l~~~w~~l~~ay 377 (549)
T 1n1b_A 298 ATVIDDIYDVYGTLDELELFTDTFKRWDTESITRLPYYMQLCYWGVHNYISDAAYDILKEHGFFCLQYLRKSVVDLVEAY 377 (549)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHTCSSGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHhcCccccccCccHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 789999999999999998 799999999
Q ss_pred HHHHHHhcCCCccCHHHHHHHHH---------------------------------------------------------
Q 045169 122 FFEAKWYHQNYVSSMKEYMTVAL--------------------------------------------------------- 144 (192)
Q Consensus 122 l~EakW~~~~~~Ps~eEYl~~~~--------------------------------------------------------- 144 (192)
++||+|+++||+||+||||+||.
T Consensus 378 l~EAkW~~~g~vPt~eEYl~~~~vS~g~~~l~~~~~~~~g~~lt~e~~~e~~~~~p~i~~~~~~i~RL~NDi~S~~~E~~ 457 (549)
T 1n1b_A 378 FHEAKWYHSGYTPSLDEYLNIAKISVASPAIISPTYFTFANASHDTAVIDSLYQYHDILCLAGIILRLPDDLGTSYFELA 457 (549)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHTCHHHHHHHHHTTSTTCCCCHHHHHHHHTTCHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHcCCCCCHHHHHHhcccchhHHHHHHHHHHHcCCCCcHHHHHhhhcccHHHHHHHHHHHHHhcccchhhhhhc
Confidence 99999999999999999999998
Q ss_pred --------Hh-------------------------------H------HHHHHHHHHHhhhhhhhcccCCCCCCCchhHH
Q 045169 145 --------DC-------------------------------L------HPILMGILNLTHAIDVIYKYEDGYTHVGIVLK 179 (192)
Q Consensus 145 --------ec-------------------------------l------~~~~~~~~n~aR~~~~~Y~~~Dgft~~~~~lk 179 (192)
+| | +|++++++|+||+++++|+++||||+|++++|
T Consensus 458 rG~v~n~V~cyMke~g~s~eeA~~~i~~~i~~~wk~ln~e~l~~~~vp~~~~~~~~n~~R~~~~~Y~~~Dg~t~~~~~~k 537 (549)
T 1n1b_A 458 RGDVPKTIQCYMKETNASEEEAVEHVKFLIREAWKDMNTAIAAGYPFPDGMVAGAANIGRVAQFIYLHGDGFGVQHSKTY 537 (549)
T ss_dssp --CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHHHHTTTSCCC----CHHH
T ss_pred cCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHeeehheeCCCCCCCCcHHHH
Confidence 11 2 78999999999999999999999999987899
Q ss_pred HHHHHhhhcccC
Q 045169 180 DFVVSLLVNPMP 191 (192)
Q Consensus 180 d~I~sll~ePv~ 191 (192)
++|++||++|||
T Consensus 538 ~~i~~l~~~pi~ 549 (549)
T 1n1b_A 538 EHIAGLLFEPYA 549 (549)
T ss_dssp HHHHHHHTSCCC
T ss_pred HHHHHHhcCCCC
Confidence 999999999997
No 9
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=1.2e-59 Score=440.65 Aligned_cols=188 Identities=35% Similarity=0.678 Sum_probs=176.4
Q ss_pred ccccccHhHHHHHHHhhHHHHHHhHHHHhHhhhh----ccCCCCCccchhhhHHHHHHHHH----------HHHHHHHHH
Q 045169 4 CKKIYNETLLTFAKLASNKLQNLYQKELDDISRI----RLLYKLPFIRERIAKCYFWILGV----------RILTKVVSM 69 (192)
Q Consensus 4 ~~~~~n~~lLelAKldFn~~Q~~hq~El~~lsrW----~~~~~l~f~Rdr~ve~yf~~~~~----------i~~aK~~~l 69 (192)
.++++|++||||||||||+||++||+||++++|| ++.++|||+|||++|||||++|+ +++||++++
T Consensus 239 ~~~~~n~~lLelAkldFn~~Q~~hq~EL~~l~rWwke~~L~~kl~faRdR~ve~Yfw~~a~~feP~~S~~Rl~~aK~~~l 318 (569)
T 2j5c_A 239 RRPDMNPTVLELAKLDFNMVQAQFQQELKEASRWWNSTGLVHELPFVRDRIVECYYWTTGVVERRQHGYERIMLTKINAL 318 (569)
T ss_dssp TCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCC--CCCHHHHHHHHHHHCCCGGGHHHHHHHHHHHHH
T ss_pred cCccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999 77778999999999999999998 899999999
Q ss_pred HHHHHHHhhhcCChhhhHHHHHHHH----HHhhhCchhHHHHHHHHH------------------------HHHHHHHHH
Q 045169 70 TSAIDDIYDVYGKIKELEPFTSAIE----SAIDKLPKYMKLCHRGLL------------------------EMKNVVKIY 121 (192)
Q Consensus 70 ~t~lDD~~D~ygt~eEl~~ft~ai~----~~~~~Lp~ymk~~f~~l~------------------------~~~~l~~~y 121 (192)
++++||+||+|||+||++.||+||+ +++++||+|||+||.+++ +|++++++|
T Consensus 319 itviDD~fD~ygT~eEl~~ft~ai~rWD~~~~~~lPeymk~~~~aL~~~~~ei~~~~~~~~~~~~~~~l~~~w~~l~~ay 398 (569)
T 2j5c_A 319 VTTIDDVFDIYGTLEELQLFTTAIQRWDIESMKQLPPYMQICYLALFNFVNEMAYDTLRDKGFDSTPYLRKVWVGLIESY 398 (569)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHTSSGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHcCccccccCCchhHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 789999999999999999 799999999
Q ss_pred HHHHHHhcCCCccCHHHHHHHHH---------------------------------------------------------
Q 045169 122 FFEAKWYHQNYVSSMKEYMTVAL--------------------------------------------------------- 144 (192)
Q Consensus 122 l~EakW~~~~~~Ps~eEYl~~~~--------------------------------------------------------- 144 (192)
++||+|+++||+||+||||+||.
T Consensus 399 l~EAkW~~~g~vPt~eEYl~~~~vSsg~~~l~~~~~~~~g~~lt~e~~e~l~~~p~i~~~~~~i~RL~NDI~S~~~E~~r 478 (569)
T 2j5c_A 399 LIEAKWYYKGHKPSLEEYMKNSWISIGGIPILSHLFFRLTDSIEEEAAESMHKYHDIVRASCTILRLADDMGTSLDEVER 478 (569)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHTSCHHHHHHHHHHSCSSCCHHHHHHHTTTCHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHcCCCCCHHHHHhcccccchHHHHHHHHHHHcCCCCCHHHHHHhhccHHHHHHHHHHHHHhcccchhhhhccc
Confidence 99999999999999999999998
Q ss_pred -------Hh-------------------------------H-----HHHHHHHHHHhhhhhhhcccC-CCCCCCchhHHH
Q 045169 145 -------DC-------------------------------L-----HPILMGILNLTHAIDVIYKYE-DGYTHVGIVLKD 180 (192)
Q Consensus 145 -------ec-------------------------------l-----~~~~~~~~n~aR~~~~~Y~~~-Dgft~~~~~lkd 180 (192)
+| | ++++++++|+||+++++|+++ ||||+|++.+|+
T Consensus 479 G~v~s~V~cyMke~g~s~eeA~~~i~~~ie~~wk~ln~e~l~~~vp~~~~~~~~nlaR~~~~~Y~~~~Dg~t~~~~~~k~ 558 (569)
T 2j5c_A 479 GDVPKSVQCYMNEKNASEEEAREHVRSLIDQTWKMMNKEMMTSSFSKYFVEVSANLARMAQWIYQHESDGFGMQHSLVNK 558 (569)
T ss_dssp ---CCHHHHC------CCHHHHHHHHHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTGGGSCTTC-CCCHHHH
T ss_pred CCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHheeehhccCCCcCCCCchHHHHH
Confidence 22 2 789999999999999999999 999999878999
Q ss_pred HHHHhhhcccC
Q 045169 181 FVVSLLVNPMP 191 (192)
Q Consensus 181 ~I~sll~ePv~ 191 (192)
+|++||++|||
T Consensus 559 ~i~~ll~~pi~ 569 (569)
T 2j5c_A 559 MLRDLLFHRYE 569 (569)
T ss_dssp HHHHHHTSCCC
T ss_pred HHHHHhccCCC
Confidence 99999999997
No 10
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=100.00 E-value=8.1e-40 Score=312.94 Aligned_cols=177 Identities=15% Similarity=0.199 Sum_probs=141.7
Q ss_pred ccccHhHHHHHHHhhHHHHHHhHHHHhHhhhh----ccCCCCCccchhhhHHHHHHHHH----------HHHHHHHHHHH
Q 045169 6 KIYNETLLTFAKLASNKLQNLYQKELDDISRI----RLLYKLPFIRERIAKCYFWILGV----------RILTKVVSMTS 71 (192)
Q Consensus 6 ~~~n~~lLelAKldFn~~Q~~hq~El~~lsrW----~~~~~l~f~Rdr~ve~yf~~~~~----------i~~aK~~~l~t 71 (192)
..+|++||||||+|||+||++||+||++++|| ++ .+|||+|||+||||||++|+ +++||+++|+|
T Consensus 432 ~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l-~~l~faRdr~ve~Yfw~~~~~feP~~s~~R~~~aK~~~l~t 510 (727)
T 3pya_A 432 YVNNNGYLELAKQDYNNCQAQHQLEWDIFQKWYEENRL-SEWGVRRSELLECYYLAAATIFESERSHERMVWAKSSVLVK 510 (727)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTG-GGGTCCHHHHHHHHHHHHTTSCCGGGHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHhHHHHHHHhHHHHhhhheeHHhcCc-ccCCchhhHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHH
Confidence 34799999999999999999999999999999 55 57999999999999999998 99999999999
Q ss_pred HHHHHhhhcCChhhhHHHHHHHH--H-----------Hhhh---Cchh--HHHHHHHHH---------------------
Q 045169 72 AIDDIYDVYGKIKELEPFTSAIE--S-----------AIDK---LPKY--MKLCHRGLL--------------------- 112 (192)
Q Consensus 72 ~lDD~~D~ygt~eEl~~ft~ai~--~-----------~~~~---Lp~y--mk~~f~~l~--------------------- 112 (192)
++||+||+|| |||++||+||+ + +++. +|+| ||+||.++|
T Consensus 511 viDD~yD~yG--eEl~~ft~av~rwd~~~~~~~~~~~~~~~~~~~p~~~~mk~~f~aL~~t~nei~~~~~k~qg~~v~~~ 588 (727)
T 3pya_A 511 AISSSFGESS--DSRRSFSDQFHEYIANARRSDHHFNDRNMRLDRPGSVQASRLAGVLIGTLNQMSFDLFMSHGRDVNNL 588 (727)
T ss_dssp HHHHHHCSSH--HHHHHHHHHHHHHC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_pred HHHHHHhcch--HHHHHHHHHHHhcccccccccccccchhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHH
Confidence 9999999999 99999999998 2 2222 3888 999999999
Q ss_pred ---HHHHHHHHHHHHHHHhc------------CCC----ccCHHHHHHHHH----Hh-----------------------
Q 045169 113 ---EMKNVVKIYFFEAKWYH------------QNY----VSSMKEYMTVAL----DC----------------------- 146 (192)
Q Consensus 113 ---~~~~l~~~yl~EakW~~------------~~~----~Ps~eEYl~~~~----ec----------------------- 146 (192)
+|++++++|++|++ +. +|. +-+-.||=+-.. -|
T Consensus 589 l~~~W~~~l~s~~~Ea~-~~EAellv~~I~l~sG~~l~e~l~~~ey~~L~~ltn~icrllndl~~~~~E~~~~~~~~IE~ 667 (727)
T 3pya_A 589 LYLSWGDWMEKWKLYGD-EGEGELMVKMIILMKNNDLTNFFTHTHFVRLAEIINRICLPRQYLKARRNDEKEKTIKSMEK 667 (727)
T ss_dssp HHHHHHHHHHHHHHHSS-CCHHHHHHHHHHHHSSSCGGGGGSSHHHHHHHHHHHHHSCCCC------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc-ccceeeeeeeeecCCCcchHhhccChhHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHH
Confidence 89999999999976 21 111 112233311111 11
Q ss_pred -HHH------------HHHHHHHHhhhhhhhcccCCCCCCCchhHHHHHHHhhhcccC
Q 045169 147 -LHP------------ILMGILNLTHAIDVIYKYEDGYTHVGIVLKDFVVSLLVNPMP 191 (192)
Q Consensus 147 -l~~------------~~~~~~n~aR~~~~~Y~~~Dgft~~~~~lkd~I~sll~ePv~ 191 (192)
++. +=+.| |+.++++.||.. ||+.|+ |..+|.++++|||.
T Consensus 668 ~mqEL~~lVl~~~~~~ip~~~-tf~~V~ksFYy~--ay~~p~--i~~hI~kVl~~~~~ 720 (727)
T 3pya_A 668 EMGKMVELALSESDTFRDVSI-TFLDVAKAFYYF--ALCGDH--LQTHISKVLFQKVG 720 (727)
T ss_dssp HHHHHHHHHHSCCTTTHHHHH-HHHHHHHHHHHH--HHHTTS--CHHHHHHHHHSCCC
T ss_pred HHHHHHHHHhccCCCCCCCcc-cHHHHHHHHHhh--hcCCHH--HHHHHHHHHcCccc
Confidence 011 11223 899999999986 999886 99999999999984
No 11
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A
Probab=99.87 E-value=3.2e-22 Score=170.50 Aligned_cols=139 Identities=13% Similarity=0.092 Sum_probs=116.2
Q ss_pred HhHHHHhH-hhhh----ccCCCCCccchhhhHHHHHHHHH----------H-HHHHHHHHHHHHHHHhhhcCChhhhHHH
Q 045169 26 LYQKELDD-ISRI----RLLYKLPFIRERIAKCYFWILGV----------R-ILTKVVSMTSAIDDIYDVYGKIKELEPF 89 (192)
Q Consensus 26 ~hq~El~~-lsrW----~~~~~l~f~Rdr~ve~yf~~~~~----------i-~~aK~~~l~t~lDD~~D~ygt~eEl~~f 89 (192)
-|.+|++. +.+| ++. ++||+|+|++++|||.+++ + ++||.+.+++++||+||. ||.+|++.|
T Consensus 13 P~~~~~~~~~~~W~~~~~l~-~~~~~r~r~~~~~~~~~~~~~~P~~~~~rl~~~~k~~~~~~~~DD~~D~-~~~~e~~~~ 90 (300)
T 1di1_A 13 PRVKEVQDEVDGYFLENWKF-PSFKAVRTFLDAKFSEVTCLYFPLALDDRIHFACRLLTVLFLIDDVLEH-MSFADGEAY 90 (300)
T ss_dssp TTHHHHHHHHHHHHHHHSCC-SSHHHHHHHHHHCHHHHHHHHCTTSCTTTHHHHHHHHHHHHHHHHHHHH-SCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCC-CCHHHHHHHHhcCcchhhhhcCCCCCHHHHHHHHHHHHHHHHHHhcccc-CCHHHHHHH
Confidence 36788885 5556 554 4699999999999988877 5 899999999999999999 999999999
Q ss_pred HHHHH--HHhhhCchhHHHHHHHHH----------------HHHHHHHHHHHHHHHhcCCCccCHHHHHHHHH------H
Q 045169 90 TSAIE--SAIDKLPKYMKLCHRGLL----------------EMKNVVKIYFFEAKWYHQNYVSSMKEYMTVAL------D 145 (192)
Q Consensus 90 t~ai~--~~~~~Lp~ymk~~f~~l~----------------~~~~l~~~yl~EakW~~~~~~Ps~eEYl~~~~------e 145 (192)
++++. ..-+.+|+|||.+|.+++ .|+.++++|+ |++|+.+|++||++|||+++. -
T Consensus 91 ~~~~~~~~~~~~lp~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-ea~~~~~~~~Ps~eeYl~~r~~s~g~~~ 169 (300)
T 1di1_A 91 NNRLIPISRGDVLPDRTKPEEFILYDLWESMRAHDAELANEVLEPTFVFMR-AQTDRARLSIHELGHYLEYREKDVGKAL 169 (300)
T ss_dssp HHHHHHHHHTSSCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTCCCCCCCCSHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHccCCCCCCCccHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHH-HHhccccCCCCCHHHHHHHHhhhccHHH
Confidence 99999 223578999999999987 3788889987 899999999999999999987 1
Q ss_pred h-------------------HHHHHHHHHHHhhhhhhhccc
Q 045169 146 C-------------------LHPILMGILNLTHAIDVIYKY 167 (192)
Q Consensus 146 c-------------------l~~~~~~~~n~aR~~~~~Y~~ 167 (192)
| ++.+.+.+-+++|.++=++.+
T Consensus 170 ~~~~~~~~~g~~l~~e~~~~~~~l~~~~~~~~~l~NDl~S~ 210 (300)
T 1di1_A 170 LSALMRFSMGLRLSADELQDMKALEANCAKQLSVVNDIYSY 210 (300)
T ss_dssp HHHHHHHHHTCCCCHHHHHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 1 156777888888888766644
No 12
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A
Probab=99.87 E-value=9.9e-23 Score=176.76 Aligned_cols=141 Identities=16% Similarity=0.125 Sum_probs=112.3
Q ss_pred HHHhHHHHhH-hhhh----ccCCCCCccchhhhHHHHHHHHH----------H-HHHHHHHHHHHHHHHhhhc--CChhh
Q 045169 24 QNLYQKELDD-ISRI----RLLYKLPFIRERIAKCYFWILGV----------R-ILTKVVSMTSAIDDIYDVY--GKIKE 85 (192)
Q Consensus 24 Q~~hq~El~~-lsrW----~~~~~l~f~Rdr~ve~yf~~~~~----------i-~~aK~~~l~t~lDD~~D~y--gt~eE 85 (192)
++.|.+|++. +++| ++.+ .||+|+|++++|||.+++ + ++||.+.+++++||+||.| ||++|
T Consensus 15 ~~p~~~e~~~~~~~W~~~~~l~~-~~~~r~r~~~~~~~~~~~~~~P~~~~~rl~~~ak~~~~~~~~DD~~D~~~~~~~ee 93 (337)
T 1ps1_A 15 QSPDHARAEAEQLAWPRSLGLIR-SDAAAERHLRGGYADLASRFYPHATGADLDLGVDLMSWFFLFDDLFDGPRGENPED 93 (337)
T ss_dssp CCTTHHHHHHSTTHHHHHTTSCC-SHHHHHHHHTTCHHHHHHHHCTTCCTHHHHHHHHHHHHHHHHHHTTSSGGGGCHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCCC-CHHHHHHHHhCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHhhccCCcCCCCHHH
Confidence 4568888875 4558 5443 589999999999999888 4 8999999999999999999 69999
Q ss_pred hHHHHHHHHHH-hhhCchhHHHHHHHHH--------------------HHHHHHHHHHHHHHHhcCCCcc-CHHHHHHHH
Q 045169 86 LEPFTSAIESA-IDKLPKYMKLCHRGLL--------------------EMKNVVKIYFFEAKWYHQNYVS-SMKEYMTVA 143 (192)
Q Consensus 86 l~~ft~ai~~~-~~~Lp~ymk~~f~~l~--------------------~~~~l~~~yl~EakW~~~~~~P-s~eEYl~~~ 143 (192)
++.|+++++.. -+.+|+|++.+|.+++ .|++++++++.||+|+++|++| |++|||+++
T Consensus 94 ~~~~~~~l~~~~~~~~p~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~~~~~~P~s~eEYl~~r 173 (337)
T 1ps1_A 94 TKQLTDQVAAALDGPLPDTAPPIAHGFADIWRRTCEGMTPAWCARSARHWRNYFDGYVDEAESRFWNAPCDSAAQYLAMR 173 (337)
T ss_dssp HHHHHHHHHGGGTSCCCTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHTTC-------CHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHc
Confidence 99999999922 2468999999999997 7899999999999999999999 999999998
Q ss_pred H-Hh---------------------H-----HHHHHHHHHHhhhhhhhc
Q 045169 144 L-DC---------------------L-----HPILMGILNLTHAIDVIY 165 (192)
Q Consensus 144 ~-ec---------------------l-----~~~~~~~~n~aR~~~~~Y 165 (192)
. .+ + +.+.+.+-+++|.++=++
T Consensus 174 ~~s~g~~~~~~~~~~~~g~~l~~~~~~~p~~~~l~~~~~~i~rL~NDl~ 222 (337)
T 1ps1_A 174 RHTIGVQPTVDLAERAGRFEVPHRVFDSAVMSAMLQIAVDVNLLLNDIA 222 (337)
T ss_dssp HHHTCHHHHHHHHHHHHTCCCCHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHcCCCCCHHHHhChHHHHHHHHHHHHHHHHHHHh
Confidence 7 11 1 356667777888876555
No 13
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A*
Probab=99.85 E-value=1.3e-21 Score=168.63 Aligned_cols=139 Identities=12% Similarity=0.085 Sum_probs=114.0
Q ss_pred HHHhHHHHhHh-hhh----ccCCCCCccchhhhHHHHHHHHH----------H-HHHHHHHHHHHHHHHhhhcCChhhhH
Q 045169 24 QNLYQKELDDI-SRI----RLLYKLPFIRERIAKCYFWILGV----------R-ILTKVVSMTSAIDDIYDVYGKIKELE 87 (192)
Q Consensus 24 Q~~hq~El~~l-srW----~~~~~l~f~Rdr~ve~yf~~~~~----------i-~~aK~~~l~t~lDD~~D~ygt~eEl~ 87 (192)
...|.+|++.. .+| ++..+ ||+|+|++++|||.+++ + ++||.+.+++++||+||. ||++|++
T Consensus 25 ~~p~~~e~~~~~~~W~~~~~l~~~-~~~r~r~~~~~~~~~~~~~~P~~~~~rl~~~ak~~~~~~~~DD~~D~-~~~~e~~ 102 (320)
T 3bny_A 25 CHPLVEEVSKEVDGYFLQHWNFPN-EKARKKFVAAGFSRVTCLYFPKALDDRIHFACRLLTVLFLIDDLLEY-MSFEEGS 102 (320)
T ss_dssp CCTTHHHHHHHHHHHHHHHSCCSS-HHHHHHHHHHCHHHHHHHHCTTSCTTTHHHHHHHHHHHHHHHHHHTT-SCHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHcCCCCC-hHHHHHHHhcCchhhHhhhCCCCCHHHHHHHHHHHHHHHHhhccccc-CChhhHH
Confidence 34688899854 456 55555 99999999999988877 5 899999999999999999 9999999
Q ss_pred HHHHHHH--HHhhhCchhHHHHHHHHH----------------HHHHHHHHHHHHHHHhcCCCccCHHHHHHHHH-----
Q 045169 88 PFTSAIE--SAIDKLPKYMKLCHRGLL----------------EMKNVVKIYFFEAKWYHQNYVSSMKEYMTVAL----- 144 (192)
Q Consensus 88 ~ft~ai~--~~~~~Lp~ymk~~f~~l~----------------~~~~l~~~yl~EakW~~~~~~Ps~eEYl~~~~----- 144 (192)
.|+++++ ...+.+|+|||.+|.+++ .|+.++ +++.|++|+.+|++||++|||+++.
T Consensus 103 ~~~~~l~~~~~~~~~p~~~~~~~~al~d~~~e~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~Ps~eeYl~~r~~s~g~ 181 (320)
T 3bny_A 103 AYNEKLIPISRGDVLPDRSIPVEYIIYDLWESMRAHDREMADEILEPVF-LFMRAQTDRTRARPMGLGGYLEYRERDVGK 181 (320)
T ss_dssp HHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHHHHHHTHHHHH-HHHHHTSCCCCCCCCCHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHhhCHHHHHHHHHHHH-HHHHHHhhhccCCCCCHHHHHHHhhhcccH
Confidence 9999999 333578999999999988 244556 5899999999999999999999987
Q ss_pred -Hh----------------H---HHHHHHHHHHhhhhhhhc
Q 045169 145 -DC----------------L---HPILMGILNLTHAIDVIY 165 (192)
Q Consensus 145 -ec----------------l---~~~~~~~~n~aR~~~~~Y 165 (192)
-| + +.+.+.+-+++|.++=++
T Consensus 182 ~~~~~~~~~~~g~~l~~e~~~~~~~l~~~~~~~~~L~NDl~ 222 (320)
T 3bny_A 182 ELLAALMRFSMGLKLSPSELQRVREIDANCSKHLSVVNDIY 222 (320)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 11 1 556677777888877665
No 14
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A*
Probab=99.77 E-value=1.1e-18 Score=155.35 Aligned_cols=115 Identities=15% Similarity=0.126 Sum_probs=100.4
Q ss_pred HHHh-Hhhhh----ccCCCCCccchhhhHHHHHHHHH----------H-HHHHHHHHHHHHHHHhhh--cC-ChhhhHHH
Q 045169 29 KELD-DISRI----RLLYKLPFIRERIAKCYFWILGV----------R-ILTKVVSMTSAIDDIYDV--YG-KIKELEPF 89 (192)
Q Consensus 29 ~El~-~lsrW----~~~~~l~f~Rdr~ve~yf~~~~~----------i-~~aK~~~l~t~lDD~~D~--yg-t~eEl~~f 89 (192)
++++ ++.+| ++. .-+++|+|++++|||.+++ + ++||.+.+++++||+||. +| +++|++.|
T Consensus 60 ~~v~~~~~~W~~~~gl~-~~~~~r~r~~~~~~~~laa~~~P~as~erL~l~a~~~~w~f~~DD~~D~~~~g~~~~~~~~~ 138 (382)
T 3kb9_A 60 PKLQETTRTWLLEKRLM-PADKVEEYADGLCYTDLMAGYYLGAPDEVLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRL 138 (382)
T ss_dssp HHHHHHHHHHHHHTTSS-CHHHHHHHHHHHCHHHHHHTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCC-CCHHHHHHHHhCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhhcccccccccCHHHHHHH
Confidence 3443 46778 332 2268999999999999998 4 999999999999999998 77 99999999
Q ss_pred HHHHHHHhhh---CchhHHHHHHHHH--------------------HHHHHHHHHHHHHHHhcCCCccCHHHHHHHHH
Q 045169 90 TSAIESAIDK---LPKYMKLCHRGLL--------------------EMKNVVKIYFFEAKWYHQNYVSSMKEYMTVAL 144 (192)
Q Consensus 90 t~ai~~~~~~---Lp~ymk~~f~~l~--------------------~~~~l~~~yl~EakW~~~~~~Ps~eEYl~~~~ 144 (192)
++++...++. +|++++.++.++. .|++++++|++||+|+++|++||+||||+++.
T Consensus 139 ~~~l~~~l~~~~~~p~~~~p~~~al~dl~~~~~~~~~~~~~~r~~~~~~~~~~a~l~Ea~w~~~g~vPs~eEYl~~r~ 216 (382)
T 3kb9_A 139 RGLLHTALDSPGDHLHHEDTLVAGFADSVRRLYAFLPATWNARFARHFHTVIEAYDREFHNRTRGIVPGVEEYLELRR 216 (382)
T ss_dssp HHHHHHHHHSCGGGTTCSSHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHh
Confidence 9999966655 6889999999888 79999999999999999999999999999987
No 15
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A*
Probab=98.46 E-value=2.9e-06 Score=77.02 Aligned_cols=54 Identities=20% Similarity=0.354 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHH-----h----------------H-----HHHHHHHHHHhhhhhhhcc
Q 045169 113 EMKNVVKIYFFEAKWYHQNYVSSMKEYMTVALD-----C----------------L-----HPILMGILNLTHAIDVIYK 166 (192)
Q Consensus 113 ~~~~l~~~yl~EakW~~~~~~Ps~eEYl~~~~e-----c----------------l-----~~~~~~~~n~aR~~~~~Y~ 166 (192)
.|++++++|++||+|+++||+||+||||+++.. | + +.+.+.+-+++|+++=++.
T Consensus 263 ~~~~~~~a~l~EA~W~~~g~vPsleEYl~~R~~sg~~p~~~l~e~~~g~~lp~~v~~~p~~~~L~~~~~~i~rL~NDI~S 342 (433)
T 3v1v_A 263 DMARLHLGYLAEGAWAQTGHVPEVWEYLAMRQFNNFRPCPTITDTVGGYELPADLHARPDMQRVIALAGNATTIVNDLYS 342 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSSSTTTGGGHHHHHTCCCCHHHHTSHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhHHHHHHHHHHHcCCCCCHHHHhCchHHHHHHHHHHHHHHhchHHH
Confidence 799999999999999999999999999999871 1 1 4456777788888876663
No 16
>1yyq_A Trichodiene synthase; terpenoid cyclase fold, site-directed mutant, pyrophosphate, lyase; 2.10A {Fusarium sporotrichioides} PDB: 1yj4_A 1yyr_A* 1yys_A* 1jfa_A 1jfg_A 2q9y_A* 2q9z_A 2ael_A* 2aek_A* 2aet_A 2ps7_A 2ps8_A 1kiy_A 1kiz_A 1yyt_A* 1yyu_A* 2ps5_A 2ps4_A 2ps6_A
Probab=75.56 E-value=6.4 Score=34.62 Aligned_cols=77 Identities=9% Similarity=0.022 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHhhhCchhHHHHHHHHH-----------------HHHHHHHHHHH
Q 045169 61 RILTKVVSMTSAIDDIYDVYGKIKELEPFTSAIESAIDKLPKYMKLCHRGLL-----------------EMKNVVKIYFF 123 (192)
Q Consensus 61 i~~aK~~~l~t~lDD~~D~ygt~eEl~~ft~ai~~~~~~Lp~ymk~~f~~l~-----------------~~~~l~~~yl~ 123 (192)
...++...++.++||.+|.-+ +++..|.+.+-....+ +.-+-..|..+. .|.+.+.+...
T Consensus 87 ~liad~~~~~F~lDD~~d~~~--~~l~~~~~~ll~G~~~-~~Pl~~al~dl~~rl~~~~~p~~~~rf~~s~~~~~~a~~~ 163 (374)
T 1yyq_A 87 ADLSIHYTYTLVLDDSKDDPY--PTMVNYFDDLQAGREQ-AHPWWALVNEHFPNVLRHFGPFCSLNLIRSTLDFFEGCWI 163 (374)
T ss_dssp HHHHHHHHHHHHHTTCCSCSH--HHHTTHHHHHHHTCCC-SSHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccccCcH--HHHHHHHHHHhcCCCC-CChHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999998644 6677777755311100 111111111111 56778888888
Q ss_pred HHHHhcCCCccCHHHHHHH
Q 045169 124 EAKWYHQNYVSSMKEYMTV 142 (192)
Q Consensus 124 EakW~~~~~~Ps~eEYl~~ 142 (192)
|+. +.+-.|+.++|...
T Consensus 164 Ea~--n~~~~p~~~~Y~~~ 180 (374)
T 1yyq_A 164 EQY--NFGGFPGSHDYPQF 180 (374)
T ss_dssp HTT--CCCCCTTCTTHHHH
T ss_pred HHh--ccCCCCCHHHHHHH
Confidence 875 47778999998663
No 17
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=56.38 E-value=19 Score=25.82 Aligned_cols=24 Identities=21% Similarity=0.250 Sum_probs=15.6
Q ss_pred hcCChhhhHHHHHHHHHHhhhCch
Q 045169 79 VYGKIKELEPFTSAIESAIDKLPK 102 (192)
Q Consensus 79 ~ygt~eEl~~ft~ai~~~~~~Lp~ 102 (192)
+.|.+||++.|+.-++.-.+.|-+
T Consensus 4 a~~dpeElr~Fa~~L~~F~d~Lq~ 27 (94)
T 3fx7_A 4 VQMDTEEVREFVGHLERFKELLRE 27 (94)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 467889999888888743333333
No 18
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=29.62 E-value=24 Score=23.91 Aligned_cols=19 Identities=21% Similarity=0.635 Sum_probs=15.7
Q ss_pred HhhhhhhhcccCCCCCCCc
Q 045169 157 LTHAIDVIYKYEDGYTHVG 175 (192)
Q Consensus 157 ~aR~~~~~Y~~~Dgft~~~ 175 (192)
..|+..++|...|||..|+
T Consensus 57 ~~~I~~ILYat~~~f~~p~ 75 (75)
T 3mtu_A 57 LQRIVDILYATDEGFVIPD 75 (75)
T ss_dssp HHHHHHHHHCBTTBCSSCC
T ss_pred HHHHHHHHhccCcCCCCCC
Confidence 3577788999999999884
No 19
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=22.78 E-value=2.4e+02 Score=21.38 Aligned_cols=61 Identities=7% Similarity=0.092 Sum_probs=33.3
Q ss_pred HHHHHhhhcCChhhhHHHHHHHH------------------HHhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 045169 72 AIDDIYDVYGKIKELEPFTSAIE------------------SAIDKLPKYMKLCHRGLLEMKNVVKIYFFEAKWYHQNYV 133 (192)
Q Consensus 72 ~lDD~~D~ygt~eEl~~ft~ai~------------------~~~~~Lp~ymk~~f~~l~~~~~l~~~yl~EakW~~~~~~ 133 (192)
++-|++-.|+...--..|.+|++ .-++.|+..-|.+...++.-. ++...+. ..|..
T Consensus 34 ~Lkev~kn~~~f~~e~e~i~alK~KSp~L~~K~~~l~~~lk~Ki~~L~Peak~Fv~kli~~~---r~l~~~~---~~G~k 107 (140)
T 2w9y_A 34 VLHEVFQKHSCFSQCGEMIDEVSKKHPELGKRLATVLEGNKKRLDGLSPAAVEYAKKLIHMV---TTTLCSL---TVGKP 107 (140)
T ss_dssp HHHHHHTTCCC----TTHHHHHHHHCHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHH---HHHHHHH---HHTCC
T ss_pred HHHHHHHHHhhcCCHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH---HHHHHHH---hcCCC
Confidence 45566655665544444566665 456777777777666655222 2222221 26999
Q ss_pred cCHHH
Q 045169 134 SSMKE 138 (192)
Q Consensus 134 Ps~eE 138 (192)
|++++
T Consensus 108 ~~~~~ 112 (140)
T 2w9y_A 108 IDDAD 112 (140)
T ss_dssp CCTHH
T ss_pred CCHHH
Confidence 99977
Done!