Query 045172
Match_columns 157
No_of_seqs 32 out of 34
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 18:35:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qip_A Protein of unknown func 99.5 2E-13 7E-18 104.5 8.7 88 65-154 66-163 (165)
2 3jy6_A Transcriptional regulat 95.8 0.045 1.5E-06 41.8 8.1 68 63-135 27-94 (276)
3 3gbv_A Putative LACI-family tr 95.4 0.031 1E-06 42.7 6.1 73 63-135 29-103 (304)
4 3o74_A Fructose transport syst 95.3 0.046 1.6E-06 41.1 6.7 71 63-136 22-92 (272)
5 3l6u_A ABC-type sugar transpor 95.3 0.082 2.8E-06 40.3 8.1 71 63-136 28-99 (293)
6 3sho_A Transcriptional regulat 95.2 0.1 3.5E-06 38.5 8.1 78 65-149 57-137 (187)
7 3m9w_A D-xylose-binding peripl 95.1 0.11 3.7E-06 40.4 8.5 71 63-136 22-93 (313)
8 3tb6_A Arabinose metabolism tr 95.1 0.091 3.1E-06 39.9 7.8 70 63-135 35-108 (298)
9 3g1w_A Sugar ABC transporter; 95.1 0.071 2.4E-06 41.0 7.2 72 63-136 24-96 (305)
10 3l49_A ABC sugar (ribose) tran 95.0 0.079 2.7E-06 40.4 7.3 71 63-136 25-96 (291)
11 3h75_A Periplasmic sugar-bindi 95.0 0.1 3.5E-06 41.4 8.2 71 63-136 24-96 (350)
12 1gud_A ALBP, D-allose-binding 95.0 0.074 2.5E-06 41.1 7.1 72 63-135 21-93 (288)
13 8abp_A L-arabinose-binding pro 94.9 0.12 4.2E-06 39.6 8.1 68 63-134 22-90 (306)
14 3ksm_A ABC-type sugar transpor 94.8 0.11 3.8E-06 39.0 7.6 73 63-136 20-94 (276)
15 2fn9_A Ribose ABC transporter, 94.8 0.14 5E-06 39.0 8.3 70 63-135 22-92 (290)
16 1tjy_A Sugar transport protein 94.7 0.086 3E-06 41.6 7.1 71 63-135 23-94 (316)
17 2dri_A D-ribose-binding protei 94.7 0.13 4.3E-06 39.3 7.7 70 63-135 21-91 (271)
18 3huu_A Transcription regulator 94.7 0.075 2.6E-06 41.3 6.5 69 63-135 47-115 (305)
19 3dbi_A Sugar-binding transcrip 94.7 0.13 4.5E-06 40.6 8.0 70 63-135 83-152 (338)
20 3k4h_A Putative transcriptiona 94.6 0.082 2.8E-06 40.3 6.5 69 63-135 33-101 (292)
21 3uug_A Multiple sugar-binding 94.6 0.1 3.4E-06 40.7 6.9 71 63-136 23-94 (330)
22 2fep_A Catabolite control prot 94.5 0.16 5.5E-06 39.2 7.9 69 63-135 36-104 (289)
23 2h3h_A Sugar ABC transporter, 94.4 0.13 4.5E-06 40.0 7.3 71 63-135 20-91 (313)
24 3e3m_A Transcriptional regulat 94.4 0.2 7E-06 40.0 8.5 69 63-135 90-158 (355)
25 2vk2_A YTFQ, ABC transporter p 94.4 0.14 4.7E-06 39.8 7.3 70 63-135 22-92 (306)
26 3hcw_A Maltose operon transcri 94.4 0.1 3.5E-06 40.4 6.6 69 63-135 32-100 (295)
27 3d8u_A PURR transcriptional re 94.2 0.14 4.7E-06 38.7 6.8 69 63-135 23-91 (275)
28 2ioy_A Periplasmic sugar-bindi 94.2 0.2 6.7E-06 38.5 7.8 70 63-135 21-91 (283)
29 2rgy_A Transcriptional regulat 94.0 0.12 4E-06 39.9 6.2 69 63-135 28-99 (290)
30 3egc_A Putative ribose operon 94.0 0.081 2.8E-06 40.5 5.2 70 63-136 28-97 (291)
31 3kjx_A Transcriptional regulat 93.9 0.2 6.8E-06 39.8 7.4 68 64-135 89-156 (344)
32 2fvy_A D-galactose-binding per 93.8 0.19 6.6E-06 38.4 7.1 70 63-135 22-93 (309)
33 3h5o_A Transcriptional regulat 93.8 0.25 8.6E-06 39.1 7.9 69 63-135 82-150 (339)
34 3brq_A HTH-type transcriptiona 93.8 0.34 1.2E-05 36.6 8.3 69 63-135 41-110 (296)
35 3rot_A ABC sugar transporter, 93.7 0.19 6.3E-06 38.9 6.9 73 63-136 23-96 (297)
36 1jx6_A LUXP protein; protein-l 93.7 0.16 5.4E-06 40.0 6.5 72 63-135 64-137 (342)
37 3kke_A LACI family transcripti 93.6 0.18 6.1E-06 39.2 6.6 70 63-136 35-104 (303)
38 2rjo_A Twin-arginine transloca 93.3 0.24 8.3E-06 39.0 7.0 70 63-135 25-97 (332)
39 3d02_A Putative LACI-type tran 93.1 0.28 9.7E-06 37.5 7.0 71 63-135 24-95 (303)
40 2o20_A Catabolite control prot 93.1 0.35 1.2E-05 38.2 7.6 69 63-135 83-151 (332)
41 2l82_A Designed protein OR32; 93.0 0.32 1.1E-05 37.9 7.0 77 68-148 47-125 (162)
42 3c3k_A Alanine racemase; struc 92.9 0.3 1E-05 37.5 6.8 68 63-135 28-95 (285)
43 3mmz_A Putative HAD family hyd 92.9 0.38 1.3E-05 35.5 7.2 76 65-150 47-127 (176)
44 3gv0_A Transcriptional regulat 92.9 0.24 8.1E-06 38.1 6.2 69 63-135 30-98 (288)
45 3e61_A Putative transcriptiona 92.8 0.29 1E-05 37.0 6.5 68 63-136 28-96 (277)
46 2iks_A DNA-binding transcripti 92.7 0.19 6.4E-06 38.6 5.5 70 63-135 40-109 (293)
47 3bil_A Probable LACI-family tr 92.7 0.28 9.7E-06 39.3 6.6 69 63-135 86-154 (348)
48 3qk7_A Transcriptional regulat 92.7 0.23 7.9E-06 38.4 5.9 68 63-135 30-97 (294)
49 1tk9_A Phosphoheptose isomeras 92.4 0.12 4E-06 38.1 3.7 47 102-148 110-159 (188)
50 2hsg_A Glucose-resistance amyl 92.4 0.33 1.1E-05 38.2 6.6 69 63-135 80-148 (332)
51 3o1i_D Periplasmic protein TOR 92.3 0.14 4.9E-06 39.0 4.3 71 63-135 25-96 (304)
52 3bbl_A Regulatory protein of L 92.3 0.16 5.5E-06 39.1 4.5 69 63-135 28-96 (287)
53 3k9c_A Transcriptional regulat 92.3 0.42 1.4E-05 36.8 6.9 67 63-135 31-97 (289)
54 2xbl_A Phosphoheptose isomeras 92.2 0.21 7E-06 37.1 4.9 47 102-148 116-165 (198)
55 2x7x_A Sensor protein; transfe 92.0 0.46 1.6E-05 37.3 7.0 70 63-135 25-96 (325)
56 3clk_A Transcription regulator 91.9 0.16 5.6E-06 38.9 4.2 69 63-135 28-97 (290)
57 1dbq_A Purine repressor; trans 91.8 0.89 3E-05 34.4 8.2 69 63-135 27-96 (289)
58 2yj3_A Copper-transporting ATP 91.1 0.031 1E-06 44.1 0.0 81 64-151 143-224 (263)
59 3brs_A Periplasmic binding pro 91.6 0.29 1E-05 37.1 5.3 72 63-135 27-99 (289)
60 3l8h_A Putative haloacid dehal 91.4 0.94 3.2E-05 32.3 7.6 82 64-145 34-138 (179)
61 1m3s_A Hypothetical protein YC 91.0 0.63 2.1E-05 34.3 6.5 71 65-148 55-128 (186)
62 1x92_A APC5045, phosphoheptose 91.0 0.35 1.2E-05 36.1 5.1 47 102-148 113-165 (199)
63 1jeo_A MJ1247, hypothetical pr 90.7 0.3 1E-05 35.8 4.5 70 65-148 58-130 (180)
64 2i2w_A Phosphoheptose isomeras 90.6 0.24 8.1E-06 38.0 4.0 79 69-149 92-181 (212)
65 1vim_A Hypothetical protein AF 90.6 0.33 1.1E-05 36.9 4.7 71 65-148 65-138 (200)
66 3fxa_A SIS domain protein; str 90.2 0.25 8.4E-06 37.2 3.6 76 66-149 64-142 (201)
67 2xhz_A KDSD, YRBH, arabinose 5 90.0 0.41 1.4E-05 35.1 4.6 76 65-149 67-146 (183)
68 2yva_A DNAA initiator-associat 89.8 0.51 1.7E-05 35.1 5.1 47 102-148 109-161 (196)
69 3j08_A COPA, copper-exporting 89.8 0.66 2.2E-05 42.1 6.8 77 67-151 467-544 (645)
70 3miz_A Putative transcriptiona 89.8 0.13 4.4E-06 39.7 1.8 68 63-135 34-101 (301)
71 3skx_A Copper-exporting P-type 89.7 1.1 3.6E-05 33.6 6.8 79 65-151 152-231 (280)
72 3e8m_A Acylneuraminate cytidyl 89.7 1.2 4E-05 31.5 6.7 75 66-148 40-118 (164)
73 3ij5_A 3-deoxy-D-manno-octulos 89.6 0.93 3.2E-05 35.1 6.7 75 65-148 84-163 (211)
74 3a1c_A Probable copper-exporti 89.4 1 3.5E-05 35.4 6.8 79 65-151 171-250 (287)
75 3etn_A Putative phosphosugar i 89.2 0.53 1.8E-05 36.5 5.0 77 65-149 77-158 (220)
76 3n07_A 3-deoxy-D-manno-octulos 89.2 1.3 4.4E-05 33.8 7.1 75 66-148 61-139 (195)
77 3trj_A Phosphoheptose isomeras 88.8 0.44 1.5E-05 36.7 4.2 48 101-148 113-166 (201)
78 3hs3_A Ribose operon repressor 88.7 0.24 8.3E-06 37.9 2.7 64 63-135 30-94 (277)
79 1qpz_A PURA, protein (purine n 88.5 1.8 6.1E-05 34.2 7.6 69 63-135 78-147 (340)
80 2h0a_A TTHA0807, transcription 88.2 0.16 5.4E-06 38.4 1.3 70 63-136 19-88 (276)
81 1pea_A Amidase operon; gene re 87.7 0.9 3.1E-05 36.3 5.5 69 64-135 159-233 (385)
82 3rfu_A Copper efflux ATPase; a 87.5 0.79 2.7E-05 42.7 5.7 77 67-150 564-641 (736)
83 3ewi_A N-acylneuraminate cytid 87.4 1.5 5.3E-05 32.9 6.4 73 67-148 46-122 (168)
84 1jye_A Lactose operon represso 86.4 1.9 6.6E-05 34.3 6.7 71 63-135 81-151 (349)
85 2l69_A Rossmann 2X3 fold prote 86.0 2 6.9E-05 32.5 6.3 63 65-132 18-81 (134)
86 3mn1_A Probable YRBI family ph 85.9 2.3 7.7E-05 31.6 6.5 75 65-148 54-133 (189)
87 3n1u_A Hydrolase, HAD superfam 85.6 2.9 0.0001 31.2 7.1 75 66-148 55-133 (191)
88 1usg_A Leucine-specific bindin 84.7 1 3.5E-05 34.8 4.2 68 64-134 157-225 (346)
89 4evq_A Putative ABC transporte 84.6 0.9 3.1E-05 35.6 4.0 69 64-135 170-239 (375)
90 2qu7_A Putative transcriptiona 84.3 0.76 2.6E-05 35.0 3.3 67 63-135 27-93 (288)
91 3cvj_A Putative phosphoheptose 84.2 0.51 1.7E-05 36.7 2.4 46 103-148 109-168 (243)
92 3h5t_A Transcriptional regulat 84.0 1.1 3.9E-05 35.7 4.4 67 64-135 94-160 (366)
93 4ex6_A ALNB; modified rossman 84.0 6.1 0.00021 28.5 8.0 22 63-84 110-131 (237)
94 1nri_A Hypothetical protein HI 83.8 1.2 4.3E-05 36.4 4.6 49 102-150 140-191 (306)
95 2zj3_A Glucosamine--fructose-6 83.3 1.4 4.9E-05 37.0 4.9 46 104-149 109-157 (375)
96 3j09_A COPA, copper-exporting 82.7 2.8 9.6E-05 38.5 7.0 77 67-151 545-622 (723)
97 1j5x_A Glucosamine-6-phosphate 82.6 1.5 5E-05 36.4 4.6 75 66-148 71-149 (342)
98 1rku_A Homoserine kinase; phos 82.5 6 0.0002 28.3 7.4 78 63-148 75-168 (206)
99 2hqb_A Transcriptional activat 82.5 2.5 8.6E-05 33.4 5.8 67 64-135 28-96 (296)
100 3td9_A Branched chain amino ac 82.4 0.73 2.5E-05 36.3 2.6 69 64-135 169-237 (366)
101 3gyb_A Transcriptional regulat 82.4 0.59 2E-05 35.4 2.0 65 63-136 25-89 (280)
102 3i09_A Periplasmic branched-ch 82.3 1.3 4.4E-05 35.1 4.0 68 65-135 160-230 (375)
103 3ipc_A ABC transporter, substr 82.2 1.1 3.7E-05 35.0 3.5 69 64-135 157-226 (356)
104 2a3n_A Putative glucosamine-fr 81.9 1.8 6.2E-05 35.9 5.0 45 104-148 104-151 (355)
105 2r8e_A 3-deoxy-D-manno-octulos 81.8 5.9 0.0002 29.1 7.3 77 65-150 61-142 (188)
106 3ic5_A Putative saccharopine d 81.5 3.3 0.00011 27.1 5.3 71 63-135 18-102 (118)
107 1byk_A Protein (trehalose oper 81.4 2.4 8.4E-05 31.5 5.1 66 63-135 22-88 (255)
108 2p9j_A Hypothetical protein AQ 81.2 9.4 0.00032 26.7 7.9 19 66-84 45-63 (162)
109 3lkb_A Probable branched-chain 81.0 1.1 3.8E-05 35.7 3.2 69 64-135 162-231 (392)
110 1k1e_A Deoxy-D-mannose-octulos 80.7 8 0.00027 28.0 7.6 75 65-148 43-122 (180)
111 3kbb_A Phosphorylated carbohyd 80.3 6.5 0.00022 28.2 6.9 38 47-84 73-111 (216)
112 2fqx_A Membrane lipoprotein TM 80.1 6.8 0.00023 31.3 7.6 66 64-135 28-95 (318)
113 3jvd_A Transcriptional regulat 79.9 1.4 4.7E-05 35.0 3.4 62 63-135 84-145 (333)
114 3lop_A Substrate binding perip 79.8 0.93 3.2E-05 35.7 2.4 69 64-135 160-229 (364)
115 1l7m_A Phosphoserine phosphata 79.7 6.3 0.00021 27.6 6.5 77 64-147 83-181 (211)
116 2pln_A HP1043, response regula 79.7 9.4 0.00032 25.3 7.2 62 64-136 33-96 (137)
117 2qv7_A Diacylglycerol kinase D 79.7 2.8 9.5E-05 34.3 5.3 75 70-147 25-100 (337)
118 2poc_A D-fructose-6- PH, isome 79.6 2.3 7.9E-05 35.5 4.9 46 104-149 99-147 (367)
119 3fvv_A Uncharacterized protein 79.4 11 0.00038 27.3 8.0 78 64-148 99-201 (232)
120 3eua_A Putative fructose-amino 79.1 2.5 8.5E-05 34.8 4.9 45 104-148 76-123 (329)
121 3sm9_A Mglur3, metabotropic gl 79.1 4 0.00014 34.7 6.3 70 65-136 205-278 (479)
122 1y80_A Predicted cobalamin bin 79.0 7.6 0.00026 29.6 7.3 64 65-135 108-179 (210)
123 3hut_A Putative branched-chain 78.6 1.5 5.2E-05 34.2 3.2 69 64-135 158-227 (358)
124 3iru_A Phoshonoacetaldehyde hy 78.6 13 0.00046 27.1 8.3 83 64-151 118-215 (277)
125 3o21_A Glutamate receptor 3; p 78.4 6.1 0.00021 32.1 7.0 65 67-134 151-221 (389)
126 3snr_A Extracellular ligand-bi 78.0 2 7E-05 33.1 3.8 68 64-134 154-222 (362)
127 3ar4_A Sarcoplasmic/endoplasmi 78.0 4.8 0.00016 38.1 7.0 38 112-149 682-720 (995)
128 3g85_A Transcriptional regulat 77.9 0.36 1.2E-05 36.7 -0.5 68 63-136 32-101 (289)
129 2zxe_A Na, K-ATPase alpha subu 77.8 4 0.00014 39.0 6.5 39 111-149 699-738 (1028)
130 3sg0_A Extracellular ligand-bi 77.8 2.6 9E-05 32.9 4.4 68 64-134 178-246 (386)
131 3eaf_A ABC transporter, substr 77.8 2 6.9E-05 34.3 3.8 69 64-135 161-232 (391)
132 3ctp_A Periplasmic binding pro 77.5 3.8 0.00013 32.1 5.3 66 63-136 80-145 (330)
133 2aml_A SIS domain protein; 469 77.3 2.2 7.5E-05 35.8 4.1 45 104-148 99-147 (373)
134 4eyg_A Twin-arginine transloca 77.0 1.7 5.9E-05 33.9 3.2 62 64-128 158-220 (368)
135 2e4u_A Metabotropic glutamate 76.5 4.8 0.00016 34.6 6.0 67 66-134 207-276 (555)
136 3p6l_A Sugar phosphate isomera 76.3 6.1 0.00021 30.0 6.0 64 66-130 69-132 (262)
137 3fkj_A Putative phosphosugar i 75.9 3 0.0001 34.8 4.5 48 104-151 91-143 (347)
138 3g68_A Putative phosphosugar i 75.8 3.1 0.00011 34.7 4.6 47 103-149 83-132 (352)
139 3cs3_A Sugar-binding transcrip 75.8 2.2 7.5E-05 32.3 3.4 60 63-135 28-89 (277)
140 3saj_A Glutamate receptor 1; r 75.8 3.7 0.00013 33.0 4.9 65 67-134 149-218 (384)
141 1jr2_A Uroporphyrinogen-III sy 75.6 0.95 3.3E-05 36.1 1.3 77 63-142 170-255 (286)
142 3s6j_A Hydrolase, haloacid deh 75.5 8.8 0.0003 27.3 6.4 21 64-84 98-118 (233)
143 3knz_A Putative sugar binding 74.8 3.4 0.00012 34.9 4.6 48 102-149 97-147 (366)
144 3sd7_A Putative phosphatase; s 74.8 5.8 0.0002 28.9 5.3 21 64-84 117-137 (240)
145 1wcw_A Uroporphyrinogen III sy 74.6 2.4 8.2E-05 32.8 3.4 76 64-142 145-231 (261)
146 2no4_A (S)-2-haloacid dehaloge 74.5 8.7 0.0003 28.0 6.3 20 65-84 113-132 (240)
147 3rag_A Uncharacterized protein 74.4 6.6 0.00023 32.5 6.1 49 97-145 4-65 (242)
148 3d8t_A Uroporphyrinogen-III sy 74.4 2.4 8.3E-05 33.8 3.5 75 64-142 170-256 (286)
149 2fpr_A Histidine biosynthesis 74.4 4.8 0.00016 29.4 4.8 19 65-83 50-68 (176)
150 1y81_A Conserved hypothetical 74.1 10 0.00036 27.6 6.6 39 94-136 86-124 (138)
151 2wm8_A MDP-1, magnesium-depend 73.9 20 0.00068 25.8 8.1 65 65-135 76-146 (187)
152 3hba_A Putative phosphosugar i 73.7 3.8 0.00013 34.1 4.6 46 104-149 92-140 (334)
153 3fj1_A Putative phosphosugar i 73.5 4.3 0.00015 33.7 4.9 46 104-149 93-141 (344)
154 1moq_A Glucosamine 6-phosphate 72.7 3.8 0.00013 34.0 4.3 45 104-148 101-149 (368)
155 3lmz_A Putative sugar isomeras 72.6 8.5 0.00029 29.3 6.0 64 66-130 67-130 (257)
156 3n28_A Phosphoserine phosphata 72.6 7.4 0.00025 31.0 5.9 87 57-150 177-286 (335)
157 2yxb_A Coenzyme B12-dependent 72.6 9.1 0.00031 28.7 6.1 64 65-135 38-108 (161)
158 2hoq_A Putative HAD-hydrolase 72.5 25 0.00086 25.6 8.5 78 64-146 101-189 (241)
159 4fe7_A Xylose operon regulator 72.4 3.9 0.00013 33.6 4.3 63 63-135 44-106 (412)
160 2gmw_A D,D-heptose 1,7-bisphos 72.4 13 0.00046 27.5 7.0 18 66-83 59-76 (211)
161 3i45_A Twin-arginine transloca 71.6 4.3 0.00015 32.3 4.2 68 65-135 162-234 (387)
162 2nyv_A Pgpase, PGP, phosphogly 71.5 16 0.00053 26.7 7.1 75 66-145 92-176 (222)
163 3cg4_A Response regulator rece 71.4 19 0.00065 23.8 7.0 77 63-148 21-108 (142)
164 4eze_A Haloacid dehalogenase-l 71.1 8.3 0.00028 31.4 6.0 87 57-150 178-287 (317)
165 2bon_A Lipid kinase; DAG kinas 70.5 9 0.00031 31.4 6.1 73 69-147 29-102 (332)
166 3n0w_A ABC branched chain amin 69.9 3.2 0.00011 32.9 3.2 68 65-135 162-233 (379)
167 1vlj_A NADH-dependent butanol 69.9 7.7 0.00026 32.9 5.7 79 65-144 34-120 (407)
168 2zay_A Response regulator rece 69.6 18 0.00062 24.1 6.6 79 61-148 20-109 (147)
169 3m1y_A Phosphoserine phosphata 69.4 13 0.00043 26.4 6.0 28 57-84 74-102 (217)
170 3ixz_A Potassium-transporting 69.3 11 0.00039 35.9 7.3 40 110-149 703-743 (1034)
171 3um9_A Haloacid dehalogenase, 68.9 14 0.00047 26.3 6.1 20 65-84 104-123 (230)
172 2pib_A Phosphorylated carbohyd 68.8 26 0.00088 24.2 8.7 28 57-84 83-111 (216)
173 4es6_A Uroporphyrinogen-III sy 68.5 1.2 3.9E-05 34.8 0.3 76 63-142 146-229 (254)
174 2ah5_A COG0546: predicted phos 68.5 11 0.00038 27.3 5.6 18 66-84 93-110 (210)
175 3p96_A Phosphoserine phosphata 68.4 11 0.00038 31.2 6.3 86 58-150 256-364 (415)
176 3ibs_A Conserved hypothetical 68.0 8.4 0.00029 28.3 4.9 35 102-136 111-149 (218)
177 1dp4_A Atrial natriuretic pept 67.7 9.3 0.00032 30.7 5.5 67 65-135 171-243 (435)
178 3kzx_A HAD-superfamily hydrola 67.3 14 0.00046 26.6 5.9 21 64-84 110-130 (231)
179 3sc6_A DTDP-4-dehydrorhamnose 67.3 4.3 0.00015 31.0 3.3 72 61-134 17-106 (287)
180 3ddh_A Putative haloacid dehal 67.3 29 0.001 24.2 8.4 77 64-145 112-195 (234)
181 1ccw_A Protein (glutamate muta 67.1 13 0.00044 27.0 5.7 64 65-135 23-93 (137)
182 3tsa_A SPNG, NDP-rhamnosyltran 67.0 17 0.00059 28.7 6.9 42 91-135 103-144 (391)
183 1zrn_A L-2-haloacid dehalogena 67.0 16 0.00055 26.2 6.2 20 65-84 103-122 (232)
184 2hsz_A Novel predicted phospha 66.8 18 0.0006 26.9 6.6 21 64-84 121-141 (243)
185 3s40_A Diacylglycerol kinase; 66.7 8.9 0.00031 31.0 5.2 23 102-124 63-85 (304)
186 3m2p_A UDP-N-acetylglucosamine 66.5 5.9 0.0002 30.7 4.0 70 61-133 14-108 (311)
187 3ks9_A Mglur1, metabotropic gl 66.0 19 0.00066 30.6 7.4 70 65-136 217-293 (496)
188 3mc1_A Predicted phosphatase, 65.8 20 0.00067 25.5 6.4 21 64-84 93-113 (226)
189 2qh8_A Uncharacterized protein 65.6 13 0.00046 28.7 5.9 67 63-135 27-99 (302)
190 2hi0_A Putative phosphoglycola 65.5 16 0.00056 26.8 6.1 76 65-146 118-203 (240)
191 3tbf_A Glucosamine--fructose-6 65.3 5.9 0.0002 33.4 4.0 45 104-148 103-151 (372)
192 2d59_A Hypothetical protein PH 65.3 18 0.00062 26.2 6.2 43 90-136 90-132 (144)
193 3dv9_A Beta-phosphoglucomutase 64.9 4.4 0.00015 29.2 2.8 21 64-84 115-135 (247)
194 1req_B Methylmalonyl-COA mutas 64.6 8.8 0.0003 35.7 5.4 76 66-148 531-616 (637)
195 1te2_A Putative phosphatase; s 64.4 33 0.0011 23.9 8.6 20 65-84 102-121 (226)
196 3gt7_A Sensor protein; structu 63.9 32 0.0011 23.5 7.7 77 63-148 21-108 (154)
197 3gyg_A NTD biosynthesis operon 63.7 22 0.00077 27.1 6.8 33 118-150 216-252 (289)
198 3o6c_A PNP synthase, pyridoxin 63.7 6.6 0.00022 33.2 4.0 67 74-156 88-154 (260)
199 3loq_A Universal stress protei 63.3 37 0.0013 26.1 8.0 65 74-140 201-265 (294)
200 3llv_A Exopolyphosphatase-rela 62.9 7.1 0.00024 27.0 3.5 71 62-132 18-101 (141)
201 3c85_A Putative glutathione-re 62.5 3 0.0001 30.4 1.5 63 64-126 53-130 (183)
202 3p6l_A Sugar phosphate isomera 62.4 47 0.0016 25.0 8.5 78 66-144 28-121 (262)
203 3s6j_A Hydrolase, haloacid deh 62.3 27 0.00091 24.7 6.6 62 88-153 150-215 (233)
204 3kd3_A Phosphoserine phosphohy 62.0 25 0.00085 24.4 6.3 21 64-84 89-109 (219)
205 3zvl_A Bifunctional polynucleo 62.0 21 0.0007 30.2 6.8 72 65-136 95-184 (416)
206 4iin_A 3-ketoacyl-acyl carrier 61.7 20 0.00067 27.6 6.2 68 61-132 41-113 (271)
207 3tva_A Xylose isomerase domain 61.7 33 0.0011 26.2 7.4 71 63-133 24-122 (290)
208 3v7e_A Ribosome-associated pro 61.7 26 0.00091 23.5 6.1 68 67-149 4-74 (82)
209 2b2x_A Integrin alpha-1; compu 61.1 9.2 0.00031 28.7 4.1 43 104-146 126-185 (223)
210 3m9l_A Hydrolase, haloacid deh 60.9 8.6 0.00029 27.4 3.7 22 63-84 76-97 (205)
211 4f11_A Gamma-aminobutyric acid 60.8 6 0.00021 32.0 3.2 65 66-135 175-243 (433)
212 1mhs_A Proton pump, plasma mem 60.8 12 0.0004 35.9 5.6 37 114-150 614-651 (920)
213 4b4k_A N5-carboxyaminoimidazol 60.2 20 0.00069 28.7 6.1 51 85-135 32-86 (181)
214 4fe3_A Cytosolic 5'-nucleotida 59.9 15 0.00051 28.8 5.2 28 56-83 139-167 (297)
215 3nas_A Beta-PGM, beta-phosphog 59.8 22 0.00075 25.4 5.8 21 64-84 99-119 (233)
216 3mw8_A Uroporphyrinogen-III sy 59.6 1.3 4.6E-05 34.1 -0.9 76 63-142 133-217 (240)
217 1tq8_A Hypothetical protein RV 59.6 33 0.0011 24.4 6.7 49 92-140 84-133 (163)
218 4g84_A Histidine--tRNA ligase, 59.5 10 0.00035 32.0 4.5 60 74-135 367-427 (464)
219 2e7z_A Acetylene hydratase AHY 59.4 12 0.00041 33.7 5.1 47 102-149 160-212 (727)
220 1shu_X Anthrax toxin receptor 59.2 33 0.0011 24.1 6.6 45 102-146 103-156 (182)
221 2qr3_A Two-component system re 59.2 28 0.00096 22.8 5.8 63 64-135 18-89 (140)
222 2j48_A Two-component sensor ki 59.2 29 0.00099 21.5 7.0 76 64-148 16-99 (119)
223 3e58_A Putative beta-phosphogl 59.1 27 0.00093 24.0 6.0 21 64-84 96-116 (214)
224 3umb_A Dehalogenase-like hydro 58.7 18 0.0006 25.8 5.1 21 64-84 106-126 (233)
225 2e0n_A Precorrin-2 C20-methylt 58.4 28 0.00096 27.3 6.6 58 92-151 87-148 (259)
226 3h5i_A Response regulator/sens 58.2 38 0.0013 22.5 7.0 77 63-148 19-105 (140)
227 2xw6_A MGS, methylglyoxal synt 58.1 22 0.00076 26.7 5.7 63 64-130 39-109 (134)
228 4hqf_A Thrombospondin-related 57.9 29 0.00097 27.1 6.6 43 104-146 130-180 (281)
229 2go7_A Hydrolase, haloacid deh 57.6 42 0.0014 22.8 7.3 75 64-146 92-178 (207)
230 3c3j_A Putative tagatose-6-pho 57.6 12 0.00042 31.2 4.6 72 68-145 74-151 (384)
231 4eek_A Beta-phosphoglucomutase 57.4 8.2 0.00028 28.5 3.2 22 63-84 116-137 (259)
232 2bpl_A Glucosamine--fructose-6 57.0 13 0.00043 33.3 4.9 45 104-148 341-389 (608)
233 2fi1_A Hydrolase, haloacid deh 57.0 6.9 0.00023 27.2 2.6 72 65-145 90-172 (190)
234 2iv2_X Formate dehydrogenase H 57.0 12 0.00042 33.6 4.8 47 102-149 166-217 (715)
235 3ff4_A Uncharacterized protein 56.7 3.7 0.00013 29.9 1.2 68 60-130 18-109 (122)
236 3hgm_A Universal stress protei 56.6 18 0.00061 24.4 4.6 47 90-136 71-120 (147)
237 3ib6_A Uncharacterized protein 56.4 38 0.0013 24.4 6.6 20 65-84 42-61 (189)
238 1zjj_A Hypothetical protein PH 56.3 54 0.0019 24.7 7.8 29 103-135 202-232 (263)
239 2o2x_A Hypothetical protein; s 55.9 26 0.00089 25.8 5.8 19 66-84 65-83 (218)
240 3odp_A Putative tagatose-6-pho 55.9 10 0.00036 32.3 4.0 48 100-147 279-332 (393)
241 3bfj_A 1,3-propanediol oxidore 55.7 13 0.00044 31.1 4.5 79 65-144 24-111 (387)
242 3jx9_A Putative phosphoheptose 55.7 14 0.00048 28.6 4.3 34 101-134 76-112 (170)
243 3m9l_A Hydrolase, haloacid deh 55.5 17 0.00059 25.8 4.6 62 88-154 130-192 (205)
244 3i42_A Response regulator rece 55.4 39 0.0013 21.8 7.8 77 63-148 17-103 (127)
245 2ydy_A Methionine adenosyltran 55.3 11 0.00036 29.2 3.6 74 62-135 15-111 (315)
246 3fwz_A Inner membrane protein 55.3 11 0.00039 26.4 3.5 74 62-135 19-107 (140)
247 3re1_A Uroporphyrinogen-III sy 55.2 0.99 3.4E-05 35.9 -2.4 73 63-142 154-237 (269)
248 2hqr_A Putative transcriptiona 55.2 37 0.0012 24.6 6.4 75 63-148 14-95 (223)
249 3rsc_A CALG2; TDP, enediyne, s 54.9 53 0.0018 26.1 7.8 39 92-133 108-147 (415)
250 3h6g_A Glutamate receptor, ion 54.8 18 0.0006 28.9 4.9 59 68-129 160-218 (395)
251 1wyz_A Putative S-adenosylmeth 54.7 23 0.0008 27.7 5.6 59 92-153 74-138 (242)
252 3rja_A Carbohydrate oxidase; p 54.7 4.7 0.00016 35.2 1.7 68 65-136 3-70 (473)
253 3p9z_A Uroporphyrinogen III co 54.6 5.2 0.00018 31.0 1.7 75 63-142 123-201 (229)
254 3ezx_A MMCP 1, monomethylamine 54.6 20 0.00068 28.1 5.2 64 65-135 112-185 (215)
255 1lss_A TRK system potassium up 54.5 42 0.0014 22.3 6.2 21 64-84 18-38 (140)
256 2dwc_A PH0318, 433AA long hypo 54.4 19 0.00066 29.7 5.3 24 63-86 32-55 (433)
257 3odp_A Putative tagatose-6-pho 54.2 18 0.00062 30.8 5.2 42 104-145 110-156 (393)
258 3kzx_A HAD-superfamily hydrola 54.1 27 0.00094 24.9 5.5 58 88-153 162-221 (231)
259 3v2g_A 3-oxoacyl-[acyl-carrier 53.7 31 0.0011 26.8 6.1 68 61-132 43-115 (271)
260 3s99_A Basic membrane lipoprot 53.6 53 0.0018 27.4 7.9 64 67-135 52-119 (356)
261 1nu0_A Hypothetical protein YQ 53.5 15 0.0005 27.5 4.0 35 110-144 37-76 (138)
262 4gnr_A ABC transporter substra 53.5 9.1 0.00031 29.9 3.0 51 82-135 179-229 (353)
263 3tqd_A 3-deoxy-manno-octuloson 53.4 28 0.00095 27.7 5.9 44 87-133 33-76 (256)
264 3lub_A Putative creatinine ami 53.4 14 0.00046 30.0 4.1 75 55-133 66-145 (254)
265 1v7p_C Integrin alpha-2; snake 53.3 15 0.0005 27.0 4.0 31 104-134 110-145 (200)
266 3pct_A Class C acid phosphatas 53.2 24 0.00083 28.9 5.6 70 63-135 107-182 (260)
267 1vl0_A DTDP-4-dehydrorhamnose 53.1 13 0.00045 28.3 3.8 71 62-134 25-113 (292)
268 2pr7_A Haloacid dehalogenase/e 52.9 27 0.00091 22.9 4.9 28 105-135 93-120 (137)
269 4hcj_A THIJ/PFPI domain protei 52.9 9.7 0.00033 29.0 3.0 66 65-135 27-110 (177)
270 4gpa_A Glutamate receptor 4; P 52.8 20 0.0007 27.8 4.9 67 67-135 151-221 (389)
271 3ezl_A Acetoacetyl-COA reducta 52.7 32 0.0011 25.8 5.9 68 61-132 25-97 (256)
272 2vpz_A Thiosulfate reductase; 52.6 14 0.00047 33.6 4.4 47 102-149 199-251 (765)
273 3oow_A Phosphoribosylaminoimid 52.5 27 0.00094 27.5 5.6 56 85-140 15-74 (166)
274 3glv_A Lipopolysaccharide core 52.5 19 0.00064 26.1 4.4 33 100-136 62-95 (143)
275 3ocu_A Lipoprotein E; hydrolas 52.5 27 0.00091 28.7 5.8 70 63-135 107-182 (262)
276 2fdr_A Conserved hypothetical 52.4 51 0.0018 23.2 6.6 58 92-153 150-215 (229)
277 2hcf_A Hydrolase, haloacid deh 52.4 28 0.00095 24.7 5.2 79 64-150 100-198 (234)
278 3qek_A NMDA glutamate receptor 52.3 8.2 0.00028 30.8 2.6 34 94-128 208-241 (384)
279 3lft_A Uncharacterized protein 52.2 26 0.00088 26.9 5.4 68 63-135 21-92 (295)
280 4grd_A N5-CAIR mutase, phospho 52.2 36 0.0012 27.1 6.2 51 85-135 22-76 (173)
281 4hqo_A Sporozoite surface prot 52.1 44 0.0015 26.1 6.8 42 104-145 127-176 (266)
282 2rjn_A Response regulator rece 52.1 51 0.0017 22.2 6.9 64 64-136 22-89 (154)
283 1rrm_A Lactaldehyde reductase; 52.1 16 0.00055 30.4 4.5 79 65-144 22-107 (386)
284 3nvb_A Uncharacterized protein 52.0 46 0.0016 28.9 7.5 74 67-144 266-347 (387)
285 3hba_A Putative phosphosugar i 51.9 18 0.00062 30.0 4.7 70 63-135 195-289 (334)
286 3lc0_A Histidyl-tRNA synthetas 51.8 36 0.0012 29.6 6.8 74 58-134 333-420 (456)
287 4e3z_A Putative oxidoreductase 51.6 36 0.0012 26.1 6.1 68 61-132 38-110 (272)
288 1oj7_A Hypothetical oxidoreduc 51.5 27 0.00092 29.5 5.8 75 67-144 45-125 (408)
289 3u26_A PF00702 domain protein; 51.4 61 0.0021 22.9 7.1 19 65-84 108-126 (234)
290 1atz_A VON willebrand factor; 51.4 17 0.00058 26.3 4.0 42 105-146 111-158 (189)
291 2i2x_B MTAC, methyltransferase 51.4 70 0.0024 25.3 8.0 64 65-135 143-212 (258)
292 1b93_A Protein (methylglyoxal 51.3 34 0.0012 26.3 5.9 64 63-130 46-117 (152)
293 2pke_A Haloacid delahogenase-l 51.1 69 0.0023 23.3 8.7 76 65-146 120-201 (251)
294 3i4f_A 3-oxoacyl-[acyl-carrier 50.7 28 0.00097 26.3 5.3 67 61-131 19-90 (264)
295 1qkk_A DCTD, C4-dicarboxylate 50.6 48 0.0016 22.3 6.1 64 64-136 18-85 (155)
296 3dqp_A Oxidoreductase YLBE; al 50.6 11 0.00037 27.7 2.9 73 61-135 12-107 (219)
297 3osu_A 3-oxoacyl-[acyl-carrier 50.6 40 0.0014 25.5 6.1 68 61-132 16-88 (246)
298 2qxy_A Response regulator; reg 50.4 51 0.0017 21.7 7.1 64 64-136 19-85 (142)
299 3l5k_A Protein GS1, haloacid d 50.2 30 0.001 25.2 5.2 22 63-84 118-139 (250)
300 3e48_A Putative nucleoside-dip 50.2 9.6 0.00033 29.1 2.6 69 62-132 13-103 (289)
301 2qlt_A (DL)-glycerol-3-phospha 50.2 20 0.00069 27.2 4.4 20 65-84 122-142 (275)
302 2hdo_A Phosphoglycolate phosph 50.2 45 0.0015 23.4 6.0 15 69-84 95-109 (209)
303 3umb_A Dehalogenase-like hydro 50.1 32 0.0011 24.4 5.3 66 81-153 154-222 (233)
304 1vmd_A MGS, methylglyoxal synt 50.1 43 0.0015 26.6 6.4 64 64-131 63-134 (178)
305 3ijr_A Oxidoreductase, short c 50.0 40 0.0014 26.4 6.3 68 61-132 59-131 (291)
306 1pt6_A Integrin alpha-1; cell 50.0 15 0.00052 27.2 3.6 33 103-135 110-147 (213)
307 1id1_A Putative potassium chan 49.7 47 0.0016 23.3 6.1 66 61-135 14-80 (153)
308 2qbu_A Precorrin-2 methyltrans 49.3 65 0.0022 24.3 7.2 58 91-150 84-145 (232)
309 2zv3_A PTH, peptidyl-tRNA hydr 49.2 21 0.00072 25.8 4.2 36 100-135 46-82 (115)
310 3s3t_A Nucleotide-binding prot 49.2 27 0.00092 23.5 4.5 43 94-136 74-118 (146)
311 3knz_A Putative sugar binding 49.2 18 0.00063 30.4 4.4 37 100-136 270-307 (366)
312 3hsy_A Glutamate receptor 2; l 49.2 28 0.00095 27.8 5.3 67 67-134 142-215 (376)
313 1wu7_A Histidyl-tRNA synthetas 49.1 23 0.00078 29.9 5.0 74 58-134 305-391 (434)
314 3hdg_A Uncharacterized protein 49.0 53 0.0018 21.4 6.2 76 64-148 22-106 (137)
315 3vot_A L-amino acid ligase, BL 48.7 17 0.00059 30.0 4.1 36 100-135 2-37 (425)
316 2gm3_A Unknown protein; AT3G01 48.6 35 0.0012 24.1 5.2 43 94-136 92-134 (175)
317 3tbf_A Glucosamine--fructose-6 48.1 22 0.00076 29.8 4.7 36 100-135 274-312 (372)
318 2aef_A Calcium-gated potassium 48.1 19 0.00065 27.1 4.0 65 63-128 22-98 (234)
319 1paa_A Yeast transcription fac 48.0 4.4 0.00015 20.0 0.3 19 1-19 11-29 (30)
320 2lci_A Protein OR36; structura 47.9 38 0.0013 25.5 5.5 67 68-134 21-109 (134)
321 1o2d_A Alcohol dehydrogenase, 47.8 17 0.00057 30.4 3.9 78 66-143 33-116 (371)
322 2gwr_A DNA-binding response re 47.5 74 0.0025 23.4 7.1 77 63-148 19-103 (238)
323 4ap9_A Phosphoserine phosphata 47.4 16 0.00055 25.2 3.2 76 63-148 85-173 (201)
324 1n3y_A Integrin alpha-X; alpha 47.4 28 0.00095 25.0 4.6 44 103-146 111-167 (198)
325 1o97_C Electron transferring f 47.3 83 0.0028 25.5 7.9 66 66-136 46-122 (264)
326 1q16_A Respiratory nitrate red 47.1 23 0.00078 35.3 5.3 48 101-149 245-297 (1247)
327 3ed5_A YFNB; APC60080, bacillu 47.0 47 0.0016 23.4 5.7 19 65-84 111-129 (238)
328 3u9l_A 3-oxoacyl-[acyl-carrier 46.8 43 0.0015 27.0 6.1 72 61-132 17-93 (324)
329 1ltq_A Polynucleotide kinase; 46.8 16 0.00056 28.3 3.5 20 66-85 197-216 (301)
330 3b8c_A ATPase 2, plasma membra 46.4 12 0.00041 35.5 3.1 36 115-150 569-605 (885)
331 1iv0_A Hypothetical protein; r 46.3 7.2 0.00025 27.6 1.2 23 111-133 36-58 (98)
332 4fcu_A 3-deoxy-manno-octuloson 46.1 52 0.0018 26.0 6.4 42 88-132 26-68 (253)
333 3is3_A 17BETA-hydroxysteroid d 46.1 50 0.0017 25.3 6.1 67 61-131 30-101 (270)
334 1ijb_A VON willebrand factor; 45.8 26 0.0009 25.9 4.4 43 103-145 116-168 (202)
335 3cnb_A DNA-binding response re 45.8 60 0.002 21.1 7.0 64 64-136 23-94 (143)
336 3h5l_A Putative branched-chain 45.7 14 0.00047 29.8 3.0 68 65-135 184-253 (419)
337 3tva_A Xylose isomerase domain 45.6 97 0.0033 23.5 7.9 67 65-131 56-157 (290)
338 2duw_A Putative COA-binding pr 45.4 1.6 5.6E-05 32.1 -2.4 32 101-135 93-124 (145)
339 3e4c_A Caspase-1; zymogen, inf 45.1 6.3 0.00021 32.9 0.9 80 18-109 44-131 (302)
340 4dim_A Phosphoribosylglycinami 45.1 48 0.0017 26.8 6.2 19 63-81 20-38 (403)
341 2zg6_A Putative uncharacterize 45.0 36 0.0012 24.6 5.0 65 65-135 103-173 (220)
342 3u5t_A 3-oxoacyl-[acyl-carrier 45.0 55 0.0019 25.3 6.3 68 61-132 39-111 (267)
343 1xty_A PTH, peptidyl-tRNA hydr 44.9 19 0.00066 26.2 3.4 36 100-135 51-87 (120)
344 3tjr_A Short chain dehydrogena 44.9 37 0.0013 26.8 5.3 67 61-132 43-114 (301)
345 3no4_A Creatininase, creatinin 44.9 17 0.00057 30.1 3.4 62 55-120 76-137 (267)
346 3edm_A Short chain dehydrogena 44.8 54 0.0018 25.1 6.1 68 61-132 20-92 (259)
347 2ivf_A Ethylbenzene dehydrogen 44.7 24 0.00083 33.3 4.9 48 101-149 245-297 (976)
348 3l4b_C TRKA K+ channel protien 44.7 33 0.0011 25.5 4.8 72 61-132 11-97 (218)
349 3grc_A Sensor protein, kinase; 44.7 64 0.0022 21.1 6.5 64 63-135 20-89 (140)
350 3net_A Histidyl-tRNA synthetas 44.4 46 0.0016 28.7 6.3 74 58-134 342-430 (465)
351 3trh_A Phosphoribosylaminoimid 44.2 65 0.0022 25.4 6.6 51 85-135 16-70 (169)
352 3oid_A Enoyl-[acyl-carrier-pro 44.2 58 0.002 24.9 6.2 68 61-132 16-88 (258)
353 1efp_B ETF, protein (electron 44.2 1.1E+02 0.0037 24.6 8.1 66 66-136 46-123 (252)
354 2epx_A Zinc finger protein 28 44.0 7.9 0.00027 21.4 1.0 20 1-20 21-40 (47)
355 3mc1_A Predicted phosphatase, 43.9 76 0.0026 22.3 6.4 63 87-153 144-210 (226)
356 2v9y_A Phosphoribosylformylgly 43.9 80 0.0027 26.0 7.4 97 38-135 191-306 (334)
357 1mf7_A Integrin alpha M; cell 43.9 17 0.00057 26.4 3.0 43 104-146 108-163 (194)
358 1mjh_A Protein (ATP-binding do 43.8 40 0.0014 23.3 4.8 36 100-135 94-129 (162)
359 3d8t_A Uroporphyrinogen-III sy 43.6 4.6 0.00016 32.2 -0.2 97 43-142 20-132 (286)
360 4gxw_A Adenosine deaminase; am 43.6 70 0.0024 27.3 7.2 69 66-135 142-219 (380)
361 1ve2_A Uroporphyrin-III C-meth 43.5 46 0.0016 25.5 5.6 61 89-151 66-130 (235)
362 2prs_A High-affinity zinc upta 43.5 72 0.0025 25.5 6.9 64 66-135 185-254 (284)
363 3dx5_A Uncharacterized protein 43.4 1E+02 0.0036 23.2 7.9 42 89-130 84-140 (286)
364 3ip3_A Oxidoreductase, putativ 43.4 15 0.00052 29.5 2.9 60 63-124 81-140 (337)
365 3om0_A Glutamate receptor, ion 43.3 26 0.0009 27.9 4.3 36 100-135 189-228 (393)
366 3hv2_A Response regulator/HD d 43.3 73 0.0025 21.4 7.3 64 64-136 29-96 (153)
367 4ex6_A ALNB; modified rossman 43.2 79 0.0027 22.5 6.5 63 88-154 163-229 (237)
368 4g85_A Histidine-tRNA ligase, 43.1 21 0.00071 31.1 3.9 60 74-135 420-480 (517)
369 1v7z_A Creatininase, creatinin 43.0 47 0.0016 26.7 5.8 67 55-125 62-138 (260)
370 1swv_A Phosphonoacetaldehyde h 42.9 22 0.00075 26.2 3.5 83 65-151 111-207 (267)
371 1eu1_A Dimethyl sulfoxide redu 42.9 27 0.00092 31.7 4.7 48 101-149 176-237 (780)
372 2xgg_A Microneme protein 2; A/ 42.9 31 0.0011 24.8 4.3 33 103-135 123-160 (178)
373 1jq5_A Glycerol dehydrogenase; 42.8 41 0.0014 27.7 5.5 75 65-141 23-102 (370)
374 2yvq_A Carbamoyl-phosphate syn 42.7 22 0.00074 26.2 3.4 67 64-130 58-129 (143)
375 1nvm_A HOA, 4-hydroxy-2-oxoval 42.5 36 0.0012 28.3 5.1 67 68-136 101-172 (345)
376 4iiu_A 3-oxoacyl-[acyl-carrier 42.4 61 0.0021 24.7 6.1 68 61-132 38-110 (267)
377 1rzw_A Protein AF2095(GR4); be 42.3 21 0.00071 26.5 3.3 36 100-135 45-81 (123)
378 2gk3_A Putative cytoplasmic pr 42.3 1.2E+02 0.0042 23.8 8.1 60 65-135 45-127 (256)
379 2qul_A D-tagatose 3-epimerase; 42.2 1.1E+02 0.0037 23.0 7.7 67 66-132 23-107 (290)
380 3lp6_A Phosphoribosylaminoimid 42.2 73 0.0025 25.3 6.6 51 85-135 17-71 (174)
381 3gdg_A Probable NADP-dependent 42.0 50 0.0017 24.9 5.5 69 61-132 34-107 (267)
382 3ia7_A CALG4; glycosysltransfe 41.9 76 0.0026 24.7 6.7 39 92-133 92-131 (402)
383 2dum_A Hypothetical protein PH 41.8 40 0.0014 23.5 4.6 42 95-136 84-127 (170)
384 2b82_A APHA, class B acid phos 41.7 18 0.00061 27.4 2.9 19 66-84 97-115 (211)
385 3dv9_A Beta-phosphoglucomutase 41.7 83 0.0028 22.4 6.4 62 88-153 168-233 (247)
386 1xmp_A PURE, phosphoribosylami 41.7 47 0.0016 26.3 5.4 51 85-135 21-75 (170)
387 1iuk_A Hypothetical protein TT 41.6 30 0.001 25.1 4.0 39 94-136 87-125 (140)
388 4e16_A Precorrin-4 C(11)-methy 41.6 94 0.0032 24.4 7.2 58 91-150 67-128 (253)
389 3nuq_A Protein SSM1, putative 41.6 89 0.003 23.3 6.8 20 65-84 150-171 (282)
390 3ghf_A Septum site-determining 41.4 97 0.0033 22.3 8.2 57 87-144 31-92 (120)
391 3afn_B Carbonyl reductase; alp 41.3 73 0.0025 23.5 6.2 67 61-132 19-91 (258)
392 2wf7_A Beta-PGM, beta-phosphog 41.3 46 0.0016 23.2 4.9 17 66-82 100-116 (221)
393 2zj3_A Glucosamine--fructose-6 41.2 37 0.0013 28.3 5.0 45 100-144 278-325 (375)
394 4dmm_A 3-oxoacyl-[acyl-carrier 41.2 65 0.0022 24.9 6.1 68 61-132 40-112 (269)
395 1vhv_A Diphthine synthase; str 41.1 90 0.0031 24.6 7.1 57 93-152 80-140 (268)
396 2eps_A POZ-, at HOOK-, and zin 40.7 7.5 0.00025 22.7 0.5 19 2-20 22-40 (54)
397 3lyl_A 3-oxoacyl-(acyl-carrier 40.7 51 0.0017 24.6 5.3 67 61-132 17-88 (247)
398 4dw8_A Haloacid dehalogenase-l 40.7 20 0.00069 27.0 3.1 35 116-150 200-238 (279)
399 3lua_A Response regulator rece 40.6 55 0.0019 21.5 5.0 63 64-135 19-90 (140)
400 2i33_A Acid phosphatase; HAD s 40.5 31 0.0011 27.4 4.3 66 65-135 109-181 (258)
401 1yio_A Response regulatory pro 40.4 81 0.0028 22.4 6.2 77 63-148 18-103 (208)
402 3kg2_A Glutamate receptor 2; I 40.4 25 0.00085 31.0 4.0 66 66-134 141-215 (823)
403 3oti_A CALG3; calicheamicin, T 40.4 77 0.0026 25.2 6.6 41 92-135 120-160 (398)
404 4id9_A Short-chain dehydrogena 40.2 26 0.00091 27.3 3.8 71 62-134 32-126 (347)
405 1n2s_A DTDP-4-, DTDP-glucose o 40.1 22 0.00076 27.0 3.2 72 62-134 13-104 (299)
406 2wm3_A NMRA-like family domain 40.1 23 0.00079 27.1 3.4 73 61-135 17-115 (299)
407 1gee_A Glucose 1-dehydrogenase 40.0 73 0.0025 23.7 6.1 67 61-132 19-91 (261)
408 2nap_A Protein (periplasmic ni 39.9 28 0.00096 31.2 4.3 47 102-149 166-219 (723)
409 2hq1_A Glucose/ribitol dehydro 39.9 87 0.003 23.0 6.4 67 61-132 17-89 (247)
410 3ax6_A Phosphoribosylaminoimid 39.8 23 0.00079 28.6 3.5 78 63-147 14-102 (380)
411 4fc5_A TON_0340, putative unch 39.7 13 0.00046 31.1 2.1 71 64-137 68-161 (270)
412 3fzq_A Putative hydrolase; YP_ 39.7 21 0.00073 26.5 3.0 35 116-150 203-241 (274)
413 2xzm_U Ribosomal protein L7AE 39.7 67 0.0023 23.5 5.7 51 93-146 31-85 (126)
414 3dlo_A Universal stress protei 39.6 96 0.0033 21.7 7.3 44 92-135 81-126 (155)
415 3k8d_A 3-deoxy-manno-octuloson 39.4 58 0.002 25.9 5.7 43 87-132 42-84 (264)
416 2o23_A HADH2 protein; HSD17B10 39.3 75 0.0026 23.6 6.1 64 61-132 24-92 (265)
417 3qvo_A NMRA family protein; st 39.3 39 0.0013 25.2 4.5 72 61-134 35-125 (236)
418 1tzb_A Glucose-6-phosphate iso 39.3 33 0.0011 27.6 4.3 44 102-148 79-125 (302)
419 3zxs_A Cryptochrome B, rscryb; 39.3 93 0.0032 28.3 7.6 76 65-144 72-153 (522)
420 3ay3_A NAD-dependent epimerase 39.3 34 0.0012 25.8 4.1 70 62-133 15-109 (267)
421 1xrs_B D-lysine 5,6-aminomutas 39.2 83 0.0028 25.9 6.8 60 69-135 152-223 (262)
422 3r0j_A Possible two component 39.2 84 0.0029 23.4 6.3 77 63-148 37-122 (250)
423 1yns_A E-1 enzyme; hydrolase f 39.2 1.3E+02 0.0043 23.0 7.9 20 65-84 138-157 (261)
424 3gk3_A Acetoacetyl-COA reducta 39.1 63 0.0022 24.7 5.7 68 61-132 37-109 (269)
425 3kht_A Response regulator; PSI 39.1 82 0.0028 20.8 6.3 77 63-148 19-108 (144)
426 3lte_A Response regulator; str 38.9 77 0.0026 20.4 7.8 77 63-148 20-106 (132)
427 1m65_A Hypothetical protein YC 38.9 21 0.00073 26.9 2.9 22 114-135 19-40 (245)
428 1h0h_A Formate dehydrogenase ( 38.8 34 0.0012 32.3 4.9 48 101-149 183-235 (977)
429 1z2t_A Anchor peptide Ser65-Le 38.7 12 0.00041 21.4 1.1 21 29-49 1-21 (26)
430 3lc0_A Histidyl-tRNA synthetas 38.6 23 0.0008 30.8 3.5 44 63-112 378-421 (456)
431 3g68_A Putative phosphosugar i 38.6 39 0.0013 28.0 4.7 37 100-136 255-292 (352)
432 3um9_A Haloacid dehalogenase, 38.6 62 0.0021 22.8 5.2 62 88-153 155-219 (230)
433 3sd7_A Putative phosphatase; s 38.5 94 0.0032 22.3 6.3 64 86-153 167-235 (240)
434 3m84_A Phosphoribosylformylgly 38.5 1.1E+02 0.0036 25.5 7.4 73 62-136 257-342 (350)
435 3d6j_A Putative haloacid dehal 38.4 96 0.0033 21.4 6.3 19 66-84 98-116 (225)
436 3tzq_B Short-chain type dehydr 38.4 67 0.0023 24.7 5.8 64 61-132 23-91 (271)
437 1ys7_A Transcriptional regulat 38.4 87 0.003 22.6 6.1 77 63-148 21-106 (233)
438 2rdm_A Response regulator rece 38.4 77 0.0026 20.3 7.3 63 64-135 20-88 (132)
439 3qiv_A Short-chain dehydrogena 38.2 60 0.002 24.3 5.4 68 61-133 21-93 (253)
440 2qjg_A Putative aldolase MJ040 38.0 97 0.0033 24.0 6.7 70 65-134 104-187 (273)
441 2gkg_A Response regulator homo 38.0 74 0.0025 20.0 6.8 63 63-135 19-88 (127)
442 1g0o_A Trihydroxynaphthalene r 37.9 79 0.0027 24.3 6.1 67 62-132 42-113 (283)
443 1oi4_A Hypothetical protein YH 37.8 24 0.00082 26.3 3.1 73 64-142 41-133 (193)
444 1j5x_A Glucosamine-6-phosphate 37.8 59 0.002 26.6 5.7 51 82-135 224-296 (342)
445 2z6r_A Diphthine synthase; met 37.8 1.3E+02 0.0045 23.4 7.5 49 102-152 77-129 (265)
446 4g9b_A Beta-PGM, beta-phosphog 37.8 70 0.0024 23.8 5.7 28 104-135 168-195 (243)
447 1htt_A Histidyl-tRNA synthetas 37.8 45 0.0015 27.8 5.0 74 58-134 299-388 (423)
448 2q2v_A Beta-D-hydroxybutyrate 37.7 75 0.0026 24.0 5.9 65 61-132 16-85 (255)
449 4fzr_A SSFS6; structural genom 37.7 1E+02 0.0035 24.3 6.9 40 93-135 114-153 (398)
450 1xq1_A Putative tropinone redu 37.7 65 0.0022 24.2 5.5 67 61-132 26-98 (266)
451 2ybo_A Methyltransferase; SUMT 37.6 64 0.0022 26.1 5.8 59 90-150 91-153 (294)
452 3fj1_A Putative phosphosugar i 37.6 25 0.00086 29.1 3.4 71 63-136 196-291 (344)
453 3tx1_A UDP-N-acetylenolpyruvoy 37.5 23 0.00078 29.7 3.2 36 101-136 53-88 (322)
454 3oam_A 3-deoxy-manno-octuloson 37.4 1.1E+02 0.0036 23.6 6.8 43 87-132 26-68 (252)
455 3pxx_A Carveol dehydrogenase; 37.3 96 0.0033 23.5 6.5 71 61-132 22-105 (287)
456 2q02_A Putative cytoplasmic pr 37.3 1.1E+02 0.0039 22.7 6.8 20 92-111 88-107 (272)
457 2h3h_A Sugar ABC transporter, 37.3 86 0.0029 23.9 6.2 34 93-127 172-206 (313)
458 1kjq_A GART 2, phosphoribosylg 37.3 55 0.0019 26.3 5.3 64 63-127 24-98 (391)
459 3kto_A Response regulator rece 37.1 58 0.002 21.4 4.7 77 63-148 20-107 (136)
460 2pjk_A 178AA long hypothetical 36.9 25 0.00087 26.8 3.1 46 59-108 39-87 (178)
461 2nyv_A Pgpase, PGP, phosphogly 36.8 67 0.0023 23.2 5.3 65 81-153 138-204 (222)
462 2zkr_f 60S ribosomal protein L 36.8 37 0.0012 28.6 4.3 49 93-144 142-194 (266)
463 3brs_A Periplasmic binding pro 36.8 62 0.0021 24.1 5.2 42 93-135 180-226 (289)
464 1zrn_A L-2-haloacid dehalogena 36.8 73 0.0025 22.7 5.4 66 81-153 150-218 (232)
465 3gyb_A Transcriptional regulat 36.7 77 0.0026 23.5 5.7 62 64-128 137-201 (280)
466 4dcc_A Putative haloacid dehal 36.7 70 0.0024 23.0 5.4 18 66-84 121-138 (229)
467 3sx2_A Putative 3-ketoacyl-(ac 36.7 87 0.003 23.8 6.2 71 61-132 25-108 (278)
468 1cbf_A Cobalt-precorrin-4 tran 36.4 1.4E+02 0.0049 23.6 7.7 59 90-150 82-144 (285)
469 4gib_A Beta-phosphoglucomutase 36.4 1.3E+02 0.0044 22.3 10.6 33 111-148 194-226 (250)
470 3eod_A Protein HNR; response r 36.2 86 0.0029 20.2 6.8 77 63-148 21-106 (130)
471 3i0z_A Putative tagatose-6-pho 36.2 38 0.0013 28.8 4.4 45 102-146 109-158 (389)
472 1jdp_A NPR-C, atrial natriuret 36.1 37 0.0013 27.5 4.1 58 67-128 179-237 (441)
473 1yx1_A Hypothetical protein PA 36.1 43 0.0015 25.4 4.3 35 94-128 89-127 (264)
474 2dc1_A L-aspartate dehydrogena 36.0 11 0.00037 28.9 0.9 30 101-130 49-78 (236)
475 3r1i_A Short-chain type dehydr 36.0 74 0.0025 24.7 5.8 67 61-132 44-115 (276)
476 3kcn_A Adenylate cyclase homol 35.9 39 0.0013 22.8 3.6 29 106-134 7-35 (151)
477 1uxy_A MURB, uridine diphospho 35.9 29 0.00098 29.3 3.5 34 103-136 15-48 (340)
478 3lmz_A Putative sugar isomeras 35.8 96 0.0033 23.3 6.2 79 66-145 36-120 (257)
479 3cnh_A Hydrolase family protei 35.7 95 0.0032 21.5 5.8 20 64-84 93-112 (200)
480 1byr_A Protein (endonuclease); 35.7 1.1E+02 0.0037 21.2 7.4 12 73-84 53-64 (155)
481 3h7a_A Short chain dehydrogena 35.6 84 0.0029 23.9 5.9 66 61-131 19-88 (252)
482 2wji_A Ferrous iron transport 35.6 47 0.0016 23.0 4.1 37 101-137 80-119 (165)
483 3hh1_A Tetrapyrrole methylase 35.4 96 0.0033 21.5 5.8 41 91-133 69-115 (117)
484 3rjz_A N-type ATP pyrophosphat 35.4 59 0.002 26.3 5.2 65 68-135 23-99 (237)
485 3snk_A Response regulator CHEY 35.3 42 0.0014 22.1 3.7 65 63-136 28-97 (135)
486 1tmo_A TMAO reductase, trimeth 35.3 41 0.0014 30.8 4.7 47 102-149 210-274 (829)
487 4g84_A Histidine--tRNA ligase, 35.3 21 0.00072 30.0 2.6 44 63-112 383-427 (464)
488 4g85_A Histidine-tRNA ligase, 35.3 27 0.00093 30.3 3.4 44 63-112 436-480 (517)
489 2b7l_A Glycerol-3-phosphate cy 35.2 42 0.0015 23.3 3.9 45 86-135 50-94 (132)
490 2rk3_A Protein DJ-1; parkinson 35.2 65 0.0022 23.8 5.1 68 64-135 21-108 (197)
491 3ruf_A WBGU; rossmann fold, UD 35.1 1.1E+02 0.0039 23.6 6.7 70 62-133 38-150 (351)
492 2no4_A (S)-2-haloacid dehaloge 35.0 1.2E+02 0.0041 21.8 6.4 62 88-153 164-228 (240)
493 2zat_A Dehydrogenase/reductase 35.0 70 0.0024 24.1 5.4 66 61-131 26-96 (260)
494 3cg0_A Response regulator rece 35.0 92 0.0031 20.2 8.0 66 63-137 23-93 (140)
495 1h7e_A 3-deoxy-manno-octuloson 35.0 1.4E+02 0.0047 22.2 7.0 42 87-131 26-68 (245)
496 3qi7_A Putative transcriptiona 34.9 90 0.0031 27.0 6.6 63 73-135 57-120 (371)
497 1m5w_A Pyridoxal phosphate bio 34.9 54 0.0019 27.4 5.0 91 66-156 31-157 (243)
498 3awd_A GOX2181, putative polyo 34.9 72 0.0025 23.7 5.3 67 61-132 25-96 (260)
499 1qq5_A Protein (L-2-haloacid d 34.9 72 0.0025 23.4 5.3 68 73-145 107-184 (253)
500 2p11_A Hypothetical protein; p 34.9 63 0.0022 23.5 4.9 19 65-84 104-122 (231)
No 1
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=99.46 E-value=2e-13 Score=104.46 Aligned_cols=88 Identities=23% Similarity=0.228 Sum_probs=77.1
Q ss_pred cHHHHHhhceEEEEecC-------CCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-CCeEEEEcCC-
Q 045172 65 FADELKRAWFWVRMVLV-------KPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-WLKMVVVGDM- 135 (157)
Q Consensus 65 la~eLrRAGv~V~~V~d-------kpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-~l~tVVVGd~- 135 (157)
+..+|++.||.|.+.|- ..++.|++|.-+|++.. ..+|++||||.|+||+++++.+|++ |.+++|+|-.
T Consensus 66 ~~~~L~~~g~~v~~~p~~~~~~~~~k~~~Dv~laiD~~~~a--~~~d~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~~~ 143 (165)
T 2qip_A 66 FHHILRGVGFEVMLKPYIQRRDGSAKGDWDVGITLDAIEIA--PDVDRVILVSGDGDFSLLVERIQQRYNKKVTVYGVPR 143 (165)
T ss_dssp HHHHHHHHTCEEEECCCCCCSSCCCSCCCHHHHHHHHHHHG--GGCSEEEEECCCGGGHHHHHHHHHHHCCEEEEEECGG
T ss_pred HHHHHHHCCcEEEEEeeeeccCCccCCCccHHHHHHHHHhh--ccCCEEEEEECChhHHHHHHHHHHHcCcEEEEEeCCC
Confidence 34688899999987653 34699999999999986 6899999999999999999999998 9999999964
Q ss_pred -CchHHHhhhhcccchhhhh
Q 045172 136 -SDGALKRIANAFFSWSDLL 154 (157)
Q Consensus 136 -~~~~L~r~AD~~fsW~ev~ 154 (157)
++.+|.+.||-|++++++.
T Consensus 144 ~~s~~L~~~ad~fi~l~~~~ 163 (165)
T 2qip_A 144 LTSQTLIDCADNFVAIDDDF 163 (165)
T ss_dssp GSCHHHHHHSSEEEECSGGG
T ss_pred cChHHHHHhCCEEEecchhh
Confidence 5689999999999998764
No 2
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=95.76 E-value=0.045 Score=41.79 Aligned_cols=68 Identities=15% Similarity=0.157 Sum_probs=54.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+.+.......+ ......+.+.+..+++|.|++.+.+. ...++.+.+.|..+|+||..
T Consensus 27 ~gi~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiIi~~~~~--~~~~~~l~~~~iPvV~i~~~ 94 (276)
T 3jy6_A 27 KGISSILESRGYIGVLFDANAD---IEREKTLLRAIGSRGFDGLILQSFSN--PQTVQEILHQQMPVVSVDRE 94 (276)
T ss_dssp HHHHHHHHTTTCEEEEEECTTC---HHHHHHHHHHHHTTTCSEEEEESSCC--HHHHHHHHTTSSCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCC---HHHHHHHHHHHHhCCCCEEEEecCCc--HHHHHHHHHCCCCEEEEecc
Confidence 4678889999999988765544 33344555555589999999999888 88999999999999999876
No 3
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=95.43 E-value=0.031 Score=42.68 Aligned_cols=73 Identities=5% Similarity=-0.077 Sum_probs=54.0
Q ss_pred CCcHHHHHhh-ceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRA-WFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD-FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRA-Gv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD-F~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..+++.. |+.+.+..-.....|..-...+.+.+..+++|.|++.+.+++ +.+.++.+.+.|..+|+|+..
T Consensus 29 ~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 103 (304)
T 3gbv_A 29 KGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPTVPQYTKGFTDALNELGIPYIYIDSQ 103 (304)
T ss_dssp HHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCSSGGGTHHHHHHHHHHTCCEEEESSC
T ss_pred HHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4677788888 888877542222233444445555555899999999988774 788999999999999999976
No 4
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=95.33 E-value=0.046 Score=41.15 Aligned_cols=71 Identities=11% Similarity=0.054 Sum_probs=54.3
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..++++.|+.+.......+ ..-.....+.+.++++|.+++.+.++.-.+.++.+.+.|..+|+++...
T Consensus 22 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 92 (272)
T 3o74_A 22 KQLEQGARARGYQLLIASSDDQ---PDSERQLQQLFRARRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRL 92 (272)
T ss_dssp HHHHHHHHHTTCEEEEEECTTC---HHHHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCC---HHHHHHHHHHHHHcCCCEEEEecCccccHHHHHHHHHcCCCEEEEccCC
Confidence 4677888999999988765433 3334455555557899999999877545778889999999999998763
No 5
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=95.31 E-value=0.082 Score=40.33 Aligned_cols=71 Identities=10% Similarity=0.068 Sum_probs=52.6
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCC-cchHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD-SDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD-sDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..++++.|+.+.......+ ..-.....+.+..+++|.|++.+.+ +++..+++.+.+.|..+|+++...
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 99 (293)
T 3l6u_A 28 NAFKAEAKANKYEALVATSQNS---RISEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDRMI 99 (293)
T ss_dssp HHHHHHHHHTTCEEEEEECSSC---HHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHHcCCEEEEECCCCC---HHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEEEecCCC
Confidence 4677889999999988755433 2333334444447999999998654 455689999999999999998763
No 6
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=95.20 E-value=0.1 Score=38.53 Aligned_cols=78 Identities=18% Similarity=0.121 Sum_probs=54.1
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHH
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALK 141 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~ 141 (157)
++..|.+.|..|..+++.+. +. . .....+ ..=|+++++|-. .+-..+++.|+++|.++|.|-+.....|.
T Consensus 57 ~~~~l~~~g~~~~~~~~~~~--~~--~-~~~~~~--~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~ 129 (187)
T 3sho_A 57 LGHGLNSLGIRTTVLTEGGS--TL--T-ITLANL--RPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSVSPPA 129 (187)
T ss_dssp HHHHHHHTTCCEEEECCCTH--HH--H-HHHHTC--CTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred HHHHHHhcCCCEEEecCCch--hH--H-HHHhcC--CCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCCcch
Confidence 45567889999999873332 11 1 112222 223677777764 35567788999999999999998678999
Q ss_pred hhhhcccc
Q 045172 142 RIANAFFS 149 (157)
Q Consensus 142 r~AD~~fs 149 (157)
+.||..+.
T Consensus 130 ~~ad~~l~ 137 (187)
T 3sho_A 130 RIADHVLV 137 (187)
T ss_dssp HHCSEEEE
T ss_pred hhCcEEEE
Confidence 99998773
No 7
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=95.13 E-value=0.11 Score=40.41 Aligned_cols=71 Identities=14% Similarity=0.082 Sum_probs=54.4
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD-FVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD-F~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..+++..|+.+....... |......+++.+-.+++|.|++.+.+++ +.+.++.+.+.|+.+|+++...
T Consensus 22 ~gi~~~a~~~g~~~~~~~~~~---~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 93 (313)
T 3m9w_A 22 DIFVKKAESLGAKVFVQSANG---NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 93 (313)
T ss_dssp HHHHHHHHHTSCEEEEEECTT---CHHHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESSCC
T ss_pred HHHHHHHHHcCCEEEEECCCC---CHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECCcC
Confidence 467888999999998865432 3344445555555799999999987654 5889999999999999998763
No 8
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=95.09 E-value=0.091 Score=39.91 Aligned_cols=70 Identities=7% Similarity=0.028 Sum_probs=53.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc----chHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS----DFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs----DF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++++.|+.+........ ..-.....+.+..+++|.|++.+.++ .-.++++.+.+.|..+|+++..
T Consensus 35 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 108 (298)
T 3tb6_A 35 RGIESYLSEQGYSMLLTSTNNN---PDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINAS 108 (298)
T ss_dssp HHHHHHHHHTTCEEEEEECTTC---HHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCC---hHHHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEecC
Confidence 4778899999999988754433 33344555555579999999998765 3457899999999999999876
No 9
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=95.07 E-value=0.071 Score=41.03 Aligned_cols=72 Identities=11% Similarity=0.088 Sum_probs=53.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..+++..|+.+..+.+... |..-.....+.+..+++|.|++.+-++ .+.+.++.+.+.|..+|+++...
T Consensus 24 ~gi~~~a~~~g~~~~~~~~~~~--~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 96 (305)
T 3g1w_A 24 KGFEDAAQALNVTVEYRGAAQY--DIQEQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDSGA 96 (305)
T ss_dssp HHHHHHHHHHTCEEEEEECSSS--CHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHHcCCEEEEeCCCcC--CHHHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECCCC
Confidence 4678889999999987432222 334444555555578999999987555 47889999999999999998763
No 10
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=95.04 E-value=0.079 Score=40.36 Aligned_cols=71 Identities=6% Similarity=-0.094 Sum_probs=54.1
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..++++.|+.+.......+ ..-...+.+.+..+++|.|++.+.++ ...+.++.+.+.|..+|+++...
T Consensus 25 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 96 (291)
T 3l49_A 25 QAQIAEIERLGGTAIALDAGRN---DQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTAT 96 (291)
T ss_dssp HHHHHHHHHTTCEEEEEECTTC---HHHHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHHHHcCCEEEEEcCCCC---HHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCC
Confidence 4677889999999988754433 33344445555578999999998774 56789999999999999998764
No 11
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=95.00 E-value=0.1 Score=41.42 Aligned_cols=71 Identities=7% Similarity=0.030 Sum_probs=53.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHH-HHHHHHhhc-cCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLR-NYMVAMVDK-RRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~-~~~~~~~~~-r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..+++..|+.+..+....+ ..-. ..+.+++.. .++|.|+++++++....+++.+.+.|..+|.|+...
T Consensus 24 ~g~~~~a~~~g~~~~~~~~~~~---~~~~~~~i~~~i~~~~~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~~ 96 (350)
T 3h75_A 24 QFMQAAARDLGLDLRILYAERD---PQNTLQQARELFQGRDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSPL 96 (350)
T ss_dssp HHHHHHHHHHTCEEEEEECTTC---HHHHHHHHHHHHHSSSCCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESCC
T ss_pred HHHHHHHHHcCCeEEEEECCCC---HHHHHHHHHHHHhcCCCCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcCCC
Confidence 4677888899999988754433 3333 334445532 599999999877778889999999999999999763
No 12
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=94.99 E-value=0.074 Score=41.08 Aligned_cols=72 Identities=15% Similarity=0.151 Sum_probs=51.6
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD-FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD-F~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..+++..|+.+..... +...|.......++.+..+++|.|++.+.+++ +.+.++.+.+.|..+|+++..
T Consensus 21 ~gi~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 93 (288)
T 1gud_A 21 KGIEDEAKTLGVSVDIFAS-PSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 93 (288)
T ss_dssp HHHHHHHHHHTCCEEEEEC-SSTTCHHHHHHHHHHHHTSSEEEEEECCSSSSTTHHHHHHHHHTTCEEEEESSC
T ss_pred HHHHHHHHHcCCEEEEeCC-CCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEECCC
Confidence 4778889999998877541 11123334444455444789999999876654 567889999999999999865
No 13
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=94.91 E-value=0.12 Score=39.56 Aligned_cols=68 Identities=18% Similarity=0.046 Sum_probs=51.3
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEEcC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD-FVEVFQEATLRWLKMVVVGD 134 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD-F~~~lr~Arer~l~tVVVGd 134 (157)
.|+..+++..|+.+..... . |..-....++.+-.+++|.|++.+.|++ ....++.+.+.|+.+|+++.
T Consensus 22 ~gi~~~a~~~g~~~~~~~~-~---~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~ 90 (306)
T 8abp_A 22 KFADKAGKDLGFEVIKIAV-P---DGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDD 90 (306)
T ss_dssp HHHHHHHHHHTEEEEEEEC-C---SHHHHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHHHcCCEEEEeCC-C---CHHHHHHHHHHHHHcCCCEEEEeCCCchhhHHHHHHHHHCCCcEEEeCC
Confidence 4677888899999977644 2 3444444444444789999999987765 45679999999999999994
No 14
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=94.84 E-value=0.11 Score=38.97 Aligned_cols=73 Identities=14% Similarity=0.114 Sum_probs=53.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccC-cceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRR-FGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~-v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..++++.|+.+..+... ...|..-.....+.+-.++ +|.|++.+-++ ...+.++.+.+.|..+|+++...
T Consensus 20 ~gi~~~~~~~g~~~~~~~~~-~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~ 94 (276)
T 3ksm_A 20 LGAQKAADEAGVTLLHRSTK-DDGDIAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDSDL 94 (276)
T ss_dssp HHHHHHHHHHTCEEEECCCS-STTCHHHHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHHcCCEEEEECCC-CCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHHCCCcEEEEecCC
Confidence 46778888999999876421 2234444444555554788 99999998654 57789999999999999998763
No 15
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=94.81 E-value=0.14 Score=38.99 Aligned_cols=70 Identities=6% Similarity=0.003 Sum_probs=50.3
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++...|+.+.+..... |......+.+.+..+++|.|++.+.++ ++.+.++.+.+.|..+|+++..
T Consensus 22 ~gi~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 92 (290)
T 2fn9_A 22 ETAKQRAEQLGYEATIFDSQN---DTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRG 92 (290)
T ss_dssp HHHHHHHHHTTCEEEEEECTT---CHHHHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCCEEEEeCCCC---CHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEEecC
Confidence 467778888899887754322 233333444444478999999987654 4668899999999999999865
No 16
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=94.75 E-value=0.086 Score=41.62 Aligned_cols=71 Identities=15% Similarity=0.125 Sum_probs=51.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD-FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD-F~~~lr~Arer~l~tVVVGd~ 135 (157)
-|+..+++..|+.+.... |...|.+-.....+.|-.+++|.||+.+-|++ ...+++.|++.|+.+|.++..
T Consensus 23 ~g~~~~~~~~g~~~~~~~--~~~~d~~~q~~~i~~li~~~vdgiii~~~~~~~~~~~~~~a~~~gipvV~~d~~ 94 (316)
T 1tjy_A 23 NGAQEAGKALGIDVTYDG--PTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSD 94 (316)
T ss_dssp HHHHHHHHHHTCEEEECC--CSSCCHHHHHHHHHHHHHTTCSEEEECCSSSSTTHHHHHHHHHTTCEEEEESSC
T ss_pred HHHHHHHHHhCCEEEEEC--CCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCcCEEEEecCC
Confidence 466777888898887642 22234444444454444799999999987765 578999999999999999754
No 17
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=94.70 E-value=0.13 Score=39.29 Aligned_cols=70 Identities=13% Similarity=0.057 Sum_probs=50.9
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD-FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD-F~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..+++..|+.+........ ..-....++.+..+++|.|++.+.+++ ....++.+++.|+.+|+++..
T Consensus 21 ~gi~~~~~~~g~~~~~~~~~~~---~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~i~~~ 91 (271)
T 2dri_A 21 DGAQKEADKLGYNLVVLDSQNN---PAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQ 91 (271)
T ss_dssp HHHHHHHHHHTCEEEEEECTTC---HHHHHHHHHHHTTTTEEEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCcEEEEeCCCCC---HHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCcEEEecCC
Confidence 5778889999998877543222 233344445555789999999876544 457889999999999999865
No 18
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=94.70 E-value=0.075 Score=41.27 Aligned_cols=69 Identities=12% Similarity=0.108 Sum_probs=53.3
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++++.|+.+....... |......+.+.+..+++|.|++++.+.+ .+.++.+.+.|..+|+||..
T Consensus 47 ~gi~~~a~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~ 115 (305)
T 3huu_A 47 NGINQACNVRGYSTRMTVSEN---SGDLYHEVKTMIQSKSVDGFILLYSLKD-DPIEHLLNEFKVPYLIVGKS 115 (305)
T ss_dssp HHHHHHHHHHTCEEEECCCSS---HHHHHHHHHHHHHTTCCSEEEESSCBTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCC---ChHHHHHHHHHHHhCCCCEEEEeCCcCC-cHHHHHHHHcCCCEEEECCC
Confidence 477889999999998865433 3444556667776899999999875543 27888899999999999876
No 19
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=94.68 E-value=0.13 Score=40.58 Aligned_cols=70 Identities=7% Similarity=-0.073 Sum_probs=54.0
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++...|+.+.......+ ........+.+..+++|.|++.+.+.+-..+...+.+.+..+|+++..
T Consensus 83 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~ 152 (338)
T 3dbi_A 83 FHAARMAEEKGRQLLLADGKHS---AEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRR 152 (338)
T ss_dssp HHHHHHHHHTTCEEEEEECTTS---HHHHHHHHHHHHHTTCSEEEECCSSSCHHHHHHHHHHCSSCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCC---hHHHHHHHHHHHhCCCCEEEEeCCCCChHHHHHHHHcCCCCEEEEcCC
Confidence 4778899999999988764333 333344455555799999999998877777888899999999999875
No 20
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=94.63 E-value=0.082 Score=40.28 Aligned_cols=69 Identities=16% Similarity=0.200 Sum_probs=52.8
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+.+....... |......+.+.+..+++|.|++++.+.+ ...++.+.+.|..+|+|+..
T Consensus 33 ~gi~~~a~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 101 (292)
T 3k4h_A 33 RGISSFAHVEGYALYMSTGET---EEEIFNGVVKMVQGRQIGGIILLYSREN-DRIIQYLHEQNFPFVLIGKP 101 (292)
T ss_dssp HHHHHHHHHTTCEEEECCCCS---HHHHHHHHHHHHHTTCCCEEEESCCBTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEeCCC---CHHHHHHHHHHHHcCCCCEEEEeCCCCC-hHHHHHHHHCCCCEEEECCC
Confidence 477889999999998764433 3444556666666899999999875543 37888999999999999876
No 21
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=94.56 E-value=0.1 Score=40.67 Aligned_cols=71 Identities=14% Similarity=0.192 Sum_probs=53.7
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..+++..|+.+....... |..-....++.+-.+++|.|++.+-++ ...+.++.+.+.|..+|+|+...
T Consensus 23 ~gi~~~a~~~g~~~~~~~~~~---~~~~~~~~i~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~~~ 94 (330)
T 3uug_A 23 NNIVKQLQEAGYKTDLQYADD---DIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLI 94 (330)
T ss_dssp HHHHHHHHHTTCEEEEEECTT---CHHHHHHHHHHHHHHTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESSCC
T ss_pred HHHHHHHHHcCCEEEEeeCCC---CHHHHHHHHHHHHHcCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECCCC
Confidence 467788899999988875332 233334444444478999999998776 57889999999999999998763
No 22
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=94.49 E-value=0.16 Score=39.19 Aligned_cols=69 Identities=9% Similarity=0.047 Sum_probs=49.8
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++++.|+.+....... |..-...+.+.+..+++|.|++.+.+.+ .+.++.+.+.|..+|+++..
T Consensus 36 ~gi~~~a~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 104 (289)
T 2fep_A 36 RGIEDIATMYKYNIILSNSDQ---NMEKELHLLNTMLGKQVDGIVFMGGNIT-DEHVAEFKRSPVPIVLAASV 104 (289)
T ss_dssp HHHHHHHHHTTCEEEEEECTT---CHHHHHHHHHHHHHTTCSEEEECCSCCC-HHHHHHHHHSSSCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEeCCC---CHHHHHHHHHHHHhCCCCEEEEecCCCC-HHHHHHHHhcCCCEEEEccc
Confidence 577888889999887754332 2333344445554789999999886544 56788888999999999875
No 23
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=94.42 E-value=0.13 Score=40.03 Aligned_cols=71 Identities=10% Similarity=0.070 Sum_probs=50.2
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..+++..|+.+..+... ..|..-...+.+.+..+++|.|++.+.++ .+...++.+.+.|..+|+++..
T Consensus 20 ~gi~~~~~~~g~~~~~~~~~--~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (313)
T 2h3h_A 20 QGVKAAGKALGVDTKFFVPQ--KEDINAQLQMLESFIAEGVNGIAIAPSDPTAVIPTIKKALEMGIPVVTLDTD 91 (313)
T ss_dssp HHHHHHHHHHTCEEEEECCS--SSCHHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCCEEEEECCC--CCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEeCCC
Confidence 46677788889988775321 22333333444444468999999987655 4678899999999999999865
No 24
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=94.38 E-value=0.2 Score=40.00 Aligned_cols=69 Identities=12% Similarity=0.074 Sum_probs=51.7
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+.+........ ..-...+.+.+..+++|.|++.+.+.+ ...+..+.+.|+.+|+|++.
T Consensus 90 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdGiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~ 158 (355)
T 3e3m_A 90 QSLTDVLEQGGLQLLLGYTAYS---PEREEQLVETMLRRRPEAMVLSYDGHT-EQTIRLLQRASIPIVEIWEK 158 (355)
T ss_dssp HHHHHHHHHTTCEEEEEECTTC---HHHHHHHHHHHHHTCCSEEEEECSCCC-HHHHHHHHHCCSCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCC---hHHHHHHHHHHHhCCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEECCc
Confidence 4788999999999987643322 223344555555799999999987655 36788899999999999875
No 25
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=94.37 E-value=0.14 Score=39.78 Aligned_cols=70 Identities=7% Similarity=-0.017 Sum_probs=50.7
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD-FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD-F~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..+++..|+.+........ ..-.....+.+..+++|.|++.+.+++ ..+.++.+.+.|..+|+++..
T Consensus 22 ~gi~~~a~~~g~~l~~~~~~~~---~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 92 (306)
T 2vk2_A 22 NVAKSEAEKRGITLKIADGQQK---QENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRS 92 (306)
T ss_dssp HHHHHHHHHHTCEEEEEECTTC---HHHHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCCEEEEeCCCCC---HHHHHHHHHHHHHcCCCEEEEeCCChhhHHHHHHHHHHCCCCEEEecCC
Confidence 4677888899999887643322 233333444444789999999887654 578899999999999999865
No 26
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=94.37 E-value=0.1 Score=40.44 Aligned_cols=69 Identities=10% Similarity=0.159 Sum_probs=52.6
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+.+....... |......+.+.+..+++|.|++++.+.+ ..+++.+.+.|..+|+||..
T Consensus 32 ~gi~~~a~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdGiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~ 100 (295)
T 3hcw_A 32 LGISETCNQHGYGTQTTVSNN---MNDLMDEVYKMIKQRMVDAFILLYSKEN-DPIKQMLIDESMPFIVIGKP 100 (295)
T ss_dssp HHHHHHHHTTTCEEEECCCCS---HHHHHHHHHHHHHTTCCSEEEESCCCTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEcCCC---ChHHHHHHHHHHHhCCcCEEEEcCcccC-hHHHHHHHhCCCCEEEECCC
Confidence 567889999999997754332 3445556667776899999999865543 26788889999999999976
No 27
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=94.22 E-value=0.14 Score=38.71 Aligned_cols=69 Identities=9% Similarity=0.103 Sum_probs=49.9
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+.+....... |........+.+..+++|.|++.+.+.+ ..+++.+.+.|..+|+++..
T Consensus 23 ~gi~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 91 (275)
T 3d8u_A 23 PSFQQALNKAGYQLLLGYSDY---SIEQEEKLLSTFLESRPAGVVLFGSEHS-QRTHQLLEASNTPVLEIAEL 91 (275)
T ss_dssp HHHHHHHHHTSCEECCEECTT---CHHHHHHHHHHHHTSCCCCEEEESSCCC-HHHHHHHHHHTCCEEEESSS
T ss_pred HHHHHHHHHCCCEEEEEcCCC---CHHHHHHHHHHHHhcCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEeec
Confidence 577788889999887654332 2333344455555799999999886654 47788888999999999865
No 28
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=94.20 E-value=0.2 Score=38.47 Aligned_cols=70 Identities=13% Similarity=0.115 Sum_probs=49.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..+++..|+.+-......+ ..-....++.+..+++|.|++.+.++ +..+.++.+.+.|..+|+++..
T Consensus 21 ~gi~~~~~~~g~~~~~~~~~~~---~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (283)
T 2ioy_A 21 NGAEEKAKELGYKIIVEDSQND---SSKELSNVEDLIQQKVDVLLINPVDSDAVVTAIKEANSKNIPVITIDRS 91 (283)
T ss_dssp HHHHHHHHHHTCEEEEEECTTC---HHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHhcCcEEEEecCCCC---HHHHHHHHHHHHHcCCCEEEEeCCchhhhHHHHHHHHHCCCeEEEecCC
Confidence 4677888999999877643332 22223333333378999999987654 4567889999999999999864
No 29
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=94.03 E-value=0.12 Score=39.89 Aligned_cols=69 Identities=22% Similarity=0.106 Sum_probs=49.0
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHH---HHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNY---MVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~---~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++++.|+.+.......+.. -... +.+.+..+++|.|++.+.+.+ .+.++.+++.|..+|+++..
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 99 (290)
T 2rgy_A 28 KQTDLELRAVHRHVVVATGCGEST---PREQALEAVRFLIGRDCDGVVVISHDLH-DEDLDELHRMHPKMVFLNRA 99 (290)
T ss_dssp HHHHHHHHHTTCEEEEECCCSSSC---HHHHHHHHHHHHHHTTCSEEEECCSSSC-HHHHHHHHHHCSSEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCchh---hhhhHHHHHHHHHhcCccEEEEecCCCC-HHHHHHHhhcCCCEEEEccc
Confidence 477788889999887654332211 1222 334444789999999987766 57788888899999999875
No 30
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=93.96 E-value=0.081 Score=40.55 Aligned_cols=70 Identities=13% Similarity=0.151 Sum_probs=53.8
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..++++.|+.+........ ..-...+.+.+..+++|.|++.+.+. ....++.+.+.|..+|+++...
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiIi~~~~~-~~~~~~~~~~~~iPvV~~~~~~ 97 (291)
T 3egc_A 28 SGVESEARHKGYSVLLANTAED---IVREREAVGQFFERRVDGLILAPSEG-EHDYLRTELPKTFPIVAVNREL 97 (291)
T ss_dssp HHHHHHHHHTTCEEEEEECTTC---HHHHHHHHHHHHHTTCSEEEECCCSS-CCHHHHHSSCTTSCEEEESSCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCC---HHHHHHHHHHHHHCCCCEEEEeCCCC-ChHHHHHhhccCCCEEEEeccc
Confidence 4677889999999988754333 33345555555579999999998776 5678888999999999999764
No 31
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=93.87 E-value=0.2 Score=39.78 Aligned_cols=68 Identities=7% Similarity=-0.068 Sum_probs=50.3
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
|+..++.+.|+.+........ ..-...+.+.+..+++|.|++++.+.+- ..++.+.+.|+.+|++||.
T Consensus 89 gi~~~a~~~g~~~~~~~~~~~---~~~~~~~i~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~i~~~ 156 (344)
T 3kjx_A 89 GINQVLEDTELQPVVGVTDYL---PEKEEKVLYEMLSWRPSGVIIAGLEHSE-AARAMLDAAGIPVVEIMDS 156 (344)
T ss_dssp HHHHHHTSSSSEEEEEECTTC---HHHHHHHHHHHHTTCCSEEEEECSCCCH-HHHHHHHHCSSCEEEEEEC
T ss_pred HHHHHHHHCCCEEEEEeCCCC---HHHHHHHHHHHHhCCCCEEEEECCCCCH-HHHHHHHhCCCCEEEEeCC
Confidence 788889999999876543322 2233444555557999999999766543 6788899999999999875
No 32
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=93.85 E-value=0.19 Score=38.41 Aligned_cols=70 Identities=14% Similarity=0.016 Sum_probs=50.5
Q ss_pred CCcHHHHHhhce-EEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWF-WVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD-FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv-~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD-F~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+ .+....... |.......++.+..+++|.|++.+.+.+ ...+++.+.+.|..+|+++..
T Consensus 22 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 93 (309)
T 2fvy_A 22 KAIEQDAKAAPDVQLLMNDSQN---DQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKE 93 (309)
T ss_dssp HHHHHHHHTCTTEEEEEEECTT---CHHHHHHHHHHHHHTTCSEEEECCSSGGGHHHHHHHHHTTTCCEEEESSC
T ss_pred HHHHHHHHhcCCeEEEEecCCC---CHHHHHHHHHHHHHcCCCEEEEeCCCcchhHHHHHHHHHCCCcEEEecCC
Confidence 467778888896 676653321 3334444555555789999999887665 467899999999999999875
No 33
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=93.78 E-value=0.25 Score=39.11 Aligned_cols=69 Identities=10% Similarity=-0.032 Sum_probs=51.1
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+.+.......+ ..-...+.+.+..+++|.|++.+.+.+- .++..+.+.|..+|++++.
T Consensus 82 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~ 150 (339)
T 3h5o_A 82 TGIETVLDAAGYQMLIGNSHYD---AGQELQLLRAYLQHRPDGVLITGLSHAE-PFERILSQHALPVVYMMDL 150 (339)
T ss_dssp HHHHHHHHHTTCEEEEEECTTC---HHHHHHHHHHHHTTCCSEEEEECSCCCT-THHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCCCC---hHHHHHHHHHHHcCCCCEEEEeCCCCCH-HHHHHHhcCCCCEEEEeec
Confidence 3778899999999987654333 2333445555558999999999855443 6788889999999999875
No 34
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=93.76 E-value=0.34 Score=36.63 Aligned_cols=69 Identities=7% Similarity=-0.037 Sum_probs=48.8
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH-cCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL-RWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are-r~l~tVVVGd~ 135 (157)
.|+..++...|+.+.......+ ..-.....+.+..+++|.|++.+.+.+ ...+..+.+ .|..+|+++..
T Consensus 41 ~gi~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~~ 110 (296)
T 3brq_A 41 FHAARMAEEKGRQLLLADGKHS---AEEERQAIQYLLDLRCDAIMIYPRFLS-VDEIDDIIDAHSQPIMVLNRR 110 (296)
T ss_dssp HHHHHHHHHTTCEEEEECCTTS---HHHHHHHHHHHHHTTCSEEEEECSSSC-HHHHHHHHHTCSSCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCC---HHHHHHHHHHHHhcCCCEEEEecCCCC-hHHHHHHHhcCCCCEEEEccc
Confidence 4677788889998887654332 233334444444789999999876654 366788888 89999999865
No 35
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=93.73 E-value=0.19 Score=38.89 Aligned_cols=73 Identities=10% Similarity=0.026 Sum_probs=53.0
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..+++..|+.+...... +..|..-.....+.+..+++|+|++.+.++ .+...++.+++.|..+|.++...
T Consensus 23 ~gi~~~a~~~g~~~~~~~~~-~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~~ 96 (297)
T 3rot_A 23 QGAKKAAEELKVDLQILAPP-GANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRP 96 (297)
T ss_dssp HHHHHHHHHHTCEEEEECCS-SSCCHHHHHHHHHHHHHTCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESCCC
T ss_pred HHHHHHHHHhCcEEEEECCC-CcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 57778888999999876522 112333444445444478999999987554 46889999999999999998763
No 36
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=93.68 E-value=0.16 Score=39.98 Aligned_cols=72 Identities=11% Similarity=0.151 Sum_probs=48.3
Q ss_pred CCcHHHHHhhceEEEEe--cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMV--LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V--~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+.+... ...++ .|..-.....+.+..+++|.|++.++.......++.+.+.|..+|++.|.
T Consensus 64 ~gi~~~a~~~g~~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~ip~V~~~~~ 137 (342)
T 1jx6_A 64 ASFEKRLYKLNINYQLNQVFTRPN-ADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI 137 (342)
T ss_dssp HHHHHHHHHTTCCEEEEEEECCTT-CCHHHHHHHHHHHHHTTCSEEEECCSSSTTHHHHHHHHHHCSCEEEEETC
T ss_pred HHHHHHHHHcCCeEEEEecCCCCc-cCHHHHHHHHHHHHhcCCCEEEEeCChHhHHHHHHHHHHcCCCEEEEecC
Confidence 37888999999877665 22210 12333334444444789999999544444578899999999999988554
No 37
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=93.59 E-value=0.18 Score=39.19 Aligned_cols=70 Identities=7% Similarity=-0.044 Sum_probs=51.4
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..++.+.|+.+........ ..-...+.+.+..+++|.|++.+.+.+-.+.+..+.+ |+.+|+||...
T Consensus 35 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~iPvV~i~~~~ 104 (303)
T 3kke_A 35 SGVQMAASGHSTDVLLGQIDAP---PRGTQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-GVPAVTINSRV 104 (303)
T ss_dssp HHHHHHHHHTTCCEEEEECCST---THHHHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-TSCEEEESCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCC---hHHHHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-CCCEEEECCcC
Confidence 4778889999999988755443 2233455555668999999999876653327788888 99999998764
No 38
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=93.32 E-value=0.24 Score=38.97 Aligned_cols=70 Identities=9% Similarity=-0.123 Sum_probs=50.7
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccC--cceEEEEcCCcc-hHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRR--FGCLVVVSDDSD-FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~--v~clvLVSDDsD-F~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++++.|+.+....... |..-....++.+..++ +|.|++.+.+++ ..++++.+.+.|+.+|+++..
T Consensus 25 ~gi~~~a~~~g~~l~~~~~~~---~~~~~~~~i~~l~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 97 (332)
T 2rjo_A 25 KGAQSFAKSVGLPYVPLTTEG---SSEKGIADIRALLQKTGGNLVLNVDPNDSADARVIVEACSKAGAYVTTIWNK 97 (332)
T ss_dssp HHHHHHHHHHTCCEEEEECTT---CHHHHHHHHHHHHHHTTTCEEEEECCSSHHHHHHHHHHHHHHTCEEEEESCC
T ss_pred HHHHHHHHHcCCEEEEecCCC---CHHHHHHHHHHHHHCCCCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEECCC
Confidence 567788888999887764332 2333344444444678 999999887654 457889999999999999875
No 39
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=93.11 E-value=0.28 Score=37.46 Aligned_cols=71 Identities=14% Similarity=0.125 Sum_probs=48.8
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD-FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD-F~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..+++..|+.+..+.+.. .|..-.....+.+..+++|.|++.+.+++ ...+++.+.+.|+.+|.++..
T Consensus 24 ~g~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~ipvV~~~~~ 95 (303)
T 3d02_A 24 EGVVQAGKEFNLNASQVGPSS--TDAPQQVKIIEDLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTNESP 95 (303)
T ss_dssp HHHHHHHHHTTEEEEEECCSS--SCHHHHHHHHHHHHHTTCSEEEECCSCHHHHHHHHHHHHHTTCEEEEESCT
T ss_pred HHHHHHHHHcCCEEEEECCCC--CCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEEecC
Confidence 467778888899887543221 12233333344444689999999887654 457889999999999999764
No 40
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=93.10 E-value=0.35 Score=38.18 Aligned_cols=69 Identities=12% Similarity=0.094 Sum_probs=49.2
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++...|+.+.......+ ..-.....+.+..+++|.|++.+.+.+ .+.+..+.+.|..+|+++..
T Consensus 83 ~gi~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 151 (332)
T 2o20_A 83 RGVDDIASMYKYNMILANSDND---VEKEEKVLETFLSKQVDGIVYMGSSLD-EKIRTSLKNSRTPVVLVGTI 151 (332)
T ss_dssp HHHHHHHHHTTCEEEEEECTTC---HHHHHHHHHHHHHTTCSEEEECSSCCC-HHHHHHHHHHCCCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEECCCC---hHHHHHHHHHHHhCCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEccc
Confidence 4778889999999887644332 233334444444789999999885443 45677788899999999865
No 41
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=92.95 E-value=0.32 Score=37.88 Aligned_cols=77 Identities=21% Similarity=0.180 Sum_probs=53.1
Q ss_pred HHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC-Ccc-hHHHHHHHHHcCCeEEEEcCCCchHHHhhhh
Q 045172 68 ELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD-DSD-FVEVFQEATLRWLKMVVVGDMSDGALKRIAN 145 (157)
Q Consensus 68 eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD-DsD-F~~~lr~Arer~l~tVVVGd~~~~~L~r~AD 145 (157)
|....||-|+||+||..-- --++.+++-- -.+|.+|+|+- |.. ..+++.+|+|+|+.+.||=+..+..-+.-|.
T Consensus 47 efekqgvdvrtvedkedfr--enireiwery--pqldvvvivttddkewikdfieeakergvevfvvynnkdddrrkeaq 122 (162)
T 2l82_A 47 EFEKQGVDVRTVEDKEDFR--ENIREIWERY--PQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNNKDDDRRKEAQ 122 (162)
T ss_dssp HHHTTTCEEEECCSHHHHH--HHHHHHHHHC--TTCCEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEECSCHHHHHHHH
T ss_pred HHHHcCCceeeeccHHHHH--HHHHHHHHhC--CCCcEEEEEecCcHHHHHHHHHHHHhcCcEEEEEecCCCchhHHHHH
Confidence 5667899999999986521 1234455443 35677777764 444 3578999999999999998875555555565
Q ss_pred ccc
Q 045172 146 AFF 148 (157)
Q Consensus 146 ~~f 148 (157)
.-|
T Consensus 123 qef 125 (162)
T 2l82_A 123 QEF 125 (162)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 42
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=92.89 E-value=0.3 Score=37.47 Aligned_cols=68 Identities=7% Similarity=0.139 Sum_probs=48.0
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..+++..|+.+....... |..-...+.+.+..+++|.|++.+.+.+ .+.+..+. .|..+|+++..
T Consensus 28 ~gi~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~-~~iPvV~~~~~ 95 (285)
T 3c3k_A 28 KGIEKTAEKNGYRILLCNTES---DLARSRSCLTLLSGKMVDGVITMDALSE-LPELQNII-GAFPWVQCAEY 95 (285)
T ss_dssp HHHHHHHHHTTCEEEEEECTT---CHHHHHHHTHHHHTTCCSEEEECCCGGG-HHHHHHHH-TTSSEEEESSC
T ss_pred HHHHHHHHHcCCEEEEEeCCC---CHHHHHHHHHHHHhCCCCEEEEeCCCCC-hHHHHHHh-cCCCEEEEccc
Confidence 467788888999987765332 2333344455555789999999875543 35677777 99999999865
No 43
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=92.88 E-value=0.38 Score=35.47 Aligned_cols=76 Identities=9% Similarity=-0.010 Sum_probs=48.0
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHH-HHcC---CeEEEEcCC-CchH
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEA-TLRW---LKMVVVGDM-SDGA 139 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~A-rer~---l~tVVVGd~-~~~~ 139 (157)
+-.+|+..|+.+-.++.+|.. ..+.+ +...|++ +.-+..+. ...++.+ .+-| -.+++|||+ +|-.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~----~~~~~---~~~lgi~--~~~~~~~k-~~~l~~~~~~~~~~~~~~~~vGD~~nD~~ 116 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNP----VVAAR---ARKLKIP--VLHGIDRK-DLALKQWCEEQGIAPERVLYVGNDVNDLP 116 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCH----HHHHH---HHHHTCC--EEESCSCH-HHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred HHHHHHHCCCeEEEEECcChH----HHHHH---HHHcCCe--eEeCCCCh-HHHHHHHHHHcCCCHHHEEEEcCCHHHHH
Confidence 457899999999999988872 11222 2344677 33333333 4444444 4444 468999999 7767
Q ss_pred HHhhhhcccch
Q 045172 140 LKRIANAFFSW 150 (157)
Q Consensus 140 L~r~AD~~fsW 150 (157)
..+.|++.+-+
T Consensus 117 ~~~~ag~~v~~ 127 (176)
T 3mmz_A 117 CFALVGWPVAV 127 (176)
T ss_dssp HHHHSSEEEEC
T ss_pred HHHHCCCeEEC
Confidence 77777766644
No 44
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=92.85 E-value=0.24 Score=38.10 Aligned_cols=69 Identities=9% Similarity=0.093 Sum_probs=49.6
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++++.|+.+........... ...+.+++..+++|.|++++.+.+ .+.++.+.+.|..+|+++..
T Consensus 30 ~gi~~~a~~~g~~~~~~~~~~~~~~---~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~ 98 (288)
T 3gv0_A 30 FGITEVLSTTQYHLVVTPHIHAKDS---MVPIRYILETGSADGVIISKIEPN-DPRVRFMTERNMPFVTHGRS 98 (288)
T ss_dssp HHHHHHHTTSSCEEEECCBSSGGGT---THHHHHHHHHTCCSEEEEESCCTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEecCCcchhH---HHHHHHHHHcCCccEEEEecCCCC-cHHHHHHhhCCCCEEEECCc
Confidence 4778889999999988754333222 233444455789999999875533 26788899999999999975
No 45
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=92.76 E-value=0.29 Score=37.02 Aligned_cols=68 Identities=9% Similarity=0.052 Sum_probs=50.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHH-HHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQ-EATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr-~Arer~l~tVVVGd~~ 136 (157)
.|+..++...|+.+.......+ ......+.+.+..+++|+|++.+.+ .+.++ .+.+.|..+|++|...
T Consensus 28 ~gi~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~~dgiIi~~~~---~~~~~~~l~~~~iPvV~~~~~~ 96 (277)
T 3e61_A 28 RGVEDVALAHGYQVLIGNSDND---IKKAQGYLATFVSHNCTGMISTAFN---ENIIENTLTDHHIPFVFIDRIN 96 (277)
T ss_dssp HHHHHHHHHTTCCEEEEECTTC---HHHHHHHHHHHHHTTCSEEEECGGG---HHHHHHHHHHC-CCEEEGGGCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCC---HHHHHHHHHHHHhCCCCEEEEecCC---hHHHHHHHHcCCCCEEEEeccC
Confidence 5678889999999887655443 3444555555558999999999844 45678 8899999999998873
No 46
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=92.70 E-value=0.19 Score=38.64 Aligned_cols=70 Identities=6% Similarity=0.000 Sum_probs=49.4
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++++.|+.+....... |..-...+.+.+..+++|.|++++.+++=..++..+.+.|..+|+++..
T Consensus 40 ~gi~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 109 (293)
T 2iks_A 40 NYLERQARQRGYQLLIACSED---QPDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRA 109 (293)
T ss_dssp HHHHHHHHHTTCEEEEEECTT---CHHHHHHHHHHHHHTTCSEEEECCSSCTTCHHHHTTTTSSSCEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEcCCC---CHHHHHHHHHHHHHcCCCEEEEeCCCCCcHHHHHHHHhCCCCEEEECCc
Confidence 477788889999888764332 2333334444444789999999876543245778888899999999865
No 47
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=92.67 E-value=0.28 Score=39.29 Aligned_cols=69 Identities=7% Similarity=0.071 Sum_probs=49.2
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++...|+.+....... |..-...+.+.+..+++|.|++.+.+.+ .+.++.+.+.|+.+|+++..
T Consensus 86 ~gi~~~a~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~ 154 (348)
T 3bil_A 86 TEIQSTASKAGLATIITNSNE---DATTMSGSLEFLTSHGVDGIICVPNEEC-ANQLEDLQKQGMPVVLVDRE 154 (348)
T ss_dssp HHHHHHHHHTTCCEEEEECTT---CHHHHHHHHHHHHHTTCSCEEECCCGGG-HHHHHHHHHC-CCEEEESSC
T ss_pred HHHHHHHHHcCCEEEEEeCCC---CHHHHHHHHHHHHhCCCCEEEEeCCCCC-hHHHHHHHhCCCCEEEEccc
Confidence 477788899999887764332 2333344455555789999999876654 46788888899999999865
No 48
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=92.65 E-value=0.23 Score=38.39 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=50.0
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+.+.......... ...+.+.+..+++|.|++.+.+.+- ..++.+.+.|+.+|+|+..
T Consensus 30 ~gi~~~a~~~g~~~~~~~~~~~~~----~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~ 97 (294)
T 3qk7_A 30 SWIGIELGKRGLDLLLIPDEPGEK----YQSLIHLVETRRVDALIVAHTQPED-FRLQYLQKQNFPFLALGRS 97 (294)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTCC----CHHHHHHHHHTCCSEEEECSCCSSC-HHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCChhh----HHHHHHHHHcCCCCEEEEeCCCCCh-HHHHHHHhCCCCEEEECCC
Confidence 467888999999988874332111 2334455557899999999876543 7888999999999999875
No 49
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=92.38 E-value=0.12 Score=38.13 Aligned_cols=47 Identities=11% Similarity=0.208 Sum_probs=39.2
Q ss_pred CcceEEEEcC---CcchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhccc
Q 045172 102 RFGCLVVVSD---DSDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFF 148 (157)
Q Consensus 102 ~v~clvLVSD---DsDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~f 148 (157)
.=|+++++|- ..+-.++++.|+++|.++|.|-+..+..|.+.||..|
T Consensus 110 ~~Dvvi~iS~sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l 159 (188)
T 1tk9_A 110 EKDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNL 159 (188)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEE
Confidence 4488888886 4567788899999999999998876678999999876
No 50
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=92.37 E-value=0.33 Score=38.16 Aligned_cols=69 Identities=9% Similarity=0.050 Sum_probs=51.0
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++...|+.+....... |......+.+.+..+++|.|++.+.+.+ .+.+..+.+.|..+|+++..
T Consensus 80 ~gi~~~a~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 148 (332)
T 2hsg_A 80 RGIEDIATMYKYNIILSNSDQ---NQDKELHLLNNMLGKQVDGIIFMSGNVT-EEHVEELKKSPVPVVLAASI 148 (332)
T ss_dssp HHHHHHHHHHTCEEEEEECCS---HHHHHHHHHHHTSCCSSCCEEECCSSCC-HHHHHHHTTSSSCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEeCCC---ChHHHHHHHHHHHhCCCcEEEEecCCCC-HHHHHHHHhCCCCEEEEccc
Confidence 467788899999988764322 3444455566665799999999886554 36788888899999999865
No 51
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=92.27 E-value=0.14 Score=39.04 Aligned_cols=71 Identities=8% Similarity=0.100 Sum_probs=50.8
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD-FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD-F~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..+++..|+.+....... ..|..-.....+.+..+++|.|++.+-+++ +...++.+. .|+.+|+++..
T Consensus 25 ~g~~~~a~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~-~~iPvV~~~~~ 96 (304)
T 3o1i_D 25 YGMVSEAEKQGVNLRVLEAGG-YPNKSRQEQQLALCTQWGANAIILGTVDPHAYEHNLKSWV-GNTPVFATVNQ 96 (304)
T ss_dssp HHHHHHHHHHTCEEEEEECSS-TTCHHHHHHHHHHHHHHTCSEEEECCSSTTSSTTTHHHHT-TTSCEEECSSC
T ss_pred HHHHHHHHHcCCeEEEEcCCC-CCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHc-CCCCEEEecCC
Confidence 467788889999988865443 123444444455444789999999876654 456788888 99999999655
No 52
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=92.26 E-value=0.16 Score=39.05 Aligned_cols=69 Identities=10% Similarity=0.015 Sum_probs=47.1
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..+++..|+.+.......+ ..-...+.+.+..+++|.|++.+.+.+ ...++.+.+.|..+|+++..
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 96 (287)
T 3bbl_A 28 SSMVREAGAVNYFVLPFPFSED---RSQIDIYRDLIRSGNVDGFVLSSINYN-DPRVQFLLKQKFPFVAFGRS 96 (287)
T ss_dssp HHHHHHHHHTTCEEEECCCCSS---TTCCHHHHHHHHTTCCSEEEECSCCTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEeCCCc---hHHHHHHHHHHHcCCCCEEEEeecCCC-cHHHHHHHhcCCCEEEECCc
Confidence 4677888899998877542211 111122334444789999999876543 26788888899999999865
No 53
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=92.26 E-value=0.42 Score=36.84 Aligned_cols=67 Identities=15% Similarity=0.130 Sum_probs=47.9
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++++.|+.+.......... .....+.+..+++|.|++.+.+.+- ..++.+.+ |..+|+|+..
T Consensus 31 ~gi~~~a~~~g~~~~~~~~~~~~~----~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~~~~-~iPvV~i~~~ 97 (289)
T 3k9c_A 31 EQIYAAATRRGYDVMLSAVAPSRA----EKVAVQALMRERCEAAILLGTRFDT-DELGALAD-RVPALVVARA 97 (289)
T ss_dssp HHHHHHHHHTTCEEEEEEEBTTBC----HHHHHHHHTTTTEEEEEEETCCCCH-HHHHHHHT-TSCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCHH----HHHHHHHHHhCCCCEEEEECCCCCH-HHHHHHHc-CCCEEEEcCC
Confidence 467889999999888764333221 2233333447999999999876654 67777777 9999999976
No 54
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=92.16 E-value=0.21 Score=37.07 Aligned_cols=47 Identities=15% Similarity=0.271 Sum_probs=39.0
Q ss_pred CcceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhccc
Q 045172 102 RFGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFF 148 (157)
Q Consensus 102 ~v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~f 148 (157)
.=|+++++|-. .+-..+++.|+++|.++|.|-+..+..|.+.||..|
T Consensus 116 ~~d~vI~iS~SG~t~~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l 165 (198)
T 2xbl_A 116 EGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLL 165 (198)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEE
Confidence 45788888864 356778889999999999999986688999999876
No 55
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=92.01 E-value=0.46 Score=37.32 Aligned_cols=70 Identities=11% Similarity=0.052 Sum_probs=48.7
Q ss_pred CCcHHHHHhh-ceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRA-WFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD-FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRA-Gv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD-F~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++... |+.+....... |.......++.+..+++|.|++.+.+.+ +.+.++.+.+.|+.+|+++..
T Consensus 25 ~gi~~~a~~~~g~~l~i~~~~~---~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 96 (325)
T 2x7x_A 25 DEILREAMFYNGVSVEIRSAGD---DNSKQAEDVHYFMDEGVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRK 96 (325)
T ss_dssp HHHHHHHTTSSSCEEEEEECTT---CHHHHHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCCcEEEEeCCCC---CHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 4666777777 88887654322 2233333444444689999999876654 467888899999999999865
No 56
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=91.87 E-value=0.16 Score=38.95 Aligned_cols=69 Identities=9% Similarity=-0.040 Sum_probs=41.5
Q ss_pred CCcHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++++.|+.+... ....+ ..-...+.+.+..+++|.|++.+.+.+ ...++.+.+.|..+|+++..
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 97 (290)
T 3clk_A 28 DGIQEEAHKNGYNLIIVYSGSAD---PEEQKHALLTAIERPVMGILLLSIALT-DDNLQLLQSSDVPYCFLSMG 97 (290)
T ss_dssp HHHHHHHHTTTCEEEEEC-------------CHHHHHHSSCCSEEEEESCC-----CHHHHHCC--CEEEESCC
T ss_pred HHHHHHHHHcCCeEEEEeCCCCC---HHHHHHHHHHHHhcCCCEEEEecccCC-HHHHHHHHhCCCCEEEEcCC
Confidence 46778888899988776 33222 222233444444789999999876543 35677788899999999875
No 57
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=91.85 E-value=0.89 Score=34.42 Aligned_cols=69 Identities=12% Similarity=0.078 Sum_probs=46.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH-cCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL-RWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are-r~l~tVVVGd~ 135 (157)
.|+..++++.|+.+....... |..-...+.+.+...++|.|++.+.+.+ ..++..+.+ .|+.+|+++..
T Consensus 27 ~gi~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~~ 96 (289)
T 1dbq_A 27 EAVEKNCFQKGYTLILGNAWN---NLEKQRAYLSMMAQKRVDGLLVMCSEYP-EPLLAMLEEYRHIPMVVMDWG 96 (289)
T ss_dssp HHHHHHHHHHTCEEEEEECTT---CHHHHHHHHHHHHHTTCSEEEEECSCCC-HHHHHHHHHTTTSCEEEEECS
T ss_pred HHHHHHHHHcCCeEEEEcCCC---ChHHHHHHHHHHHhCCCCEEEEEeccCC-HHHHHHHHhccCCCEEEEccC
Confidence 467778888999887764432 2333444455544789999999876653 234555555 79999999865
No 58
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=91.10 E-value=0.031 Score=44.15 Aligned_cols=81 Identities=14% Similarity=0.164 Sum_probs=54.7
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC-CchHHHh
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM-SDGALKR 142 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~-~~~~L~r 142 (157)
.+-.+|+..|+.+-+++.+|... +...+...|++.++-..-..+|..+++.....+-.++.|||+ +|-.-.+
T Consensus 143 ~~l~~L~~~g~~~~i~T~~~~~~-------~~~~~~~~gl~~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~ 215 (263)
T 2yj3_A 143 DYLEKLKNEGLKIIILSGDKEDK-------VKELSKELNIQEYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215 (263)
Confidence 44567899999999998887722 111222234432211111457888888888877889999999 6666778
Q ss_pred hhhcccchh
Q 045172 143 IANAFFSWS 151 (157)
Q Consensus 143 ~AD~~fsW~ 151 (157)
.|++.+.|.
T Consensus 216 ~Agv~va~g 224 (263)
T 2yj3_A 216 LADVSVAMG 224 (263)
Confidence 888888885
No 59
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=91.59 E-value=0.29 Score=37.12 Aligned_cols=72 Identities=15% Similarity=0.177 Sum_probs=50.1
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++++.|+.+..+... ...|..-.....+.+..+++|.|++.+.++ ++.+.++.+.+.|..+|+++..
T Consensus 27 ~gi~~~a~~~g~~~~~~~~~-~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 99 (289)
T 3brs_A 27 EGAQMAAKEYEIKLEFMAPE-KEEDYLVQNELIEEAIKRKPDVILLAAADYEKTYDAAKEIKDAGIKLIVIDSG 99 (289)
T ss_dssp HHHHHHHHHHTCEEEECCCS-STTCHHHHHHHHHHHHHTCCSEEEECCSCTTTTHHHHTTTGGGTCEEEEESSC
T ss_pred HHHHHHHHHcCCEEEEecCC-CCCCHHHHHHHHHHHHHhCCCEEEEeCCChHHhHHHHHHHHHCCCcEEEECCC
Confidence 47778889999988876431 012223333344444478999999987554 4567888899999999999865
No 60
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=91.44 E-value=0.94 Score=32.28 Aligned_cols=82 Identities=15% Similarity=0.019 Sum_probs=45.3
Q ss_pred CcHHHHHhhceEEEEecCCCcc-------HH-HHHHHHHHHHhhccC--cceEEEE----cCCcch-----HHHHHHHHH
Q 045172 64 GFADELKRAWFWVRMVLVKPQD-------AD-VLLRNYMVAMVDKRR--FGCLVVV----SDDSDF-----VEVFQEATL 124 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqA-------AD-~AL~~~~~~~~~~r~--v~clvLV----SDDsDF-----~~~lr~Are 124 (157)
.+-.+|++.|+.+-.++..|.. .+ .++...+...+...| ++.++.. |++... .-+...+++
T Consensus 34 ~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~ 113 (179)
T 3l8h_A 34 QAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARR 113 (179)
T ss_dssp HHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 3456788889999888888751 11 122344555555566 6665532 344321 223333333
Q ss_pred cCC---eEEEEcCC-CchHHHhhhh
Q 045172 125 RWL---KMVVVGDM-SDGALKRIAN 145 (157)
Q Consensus 125 r~l---~tVVVGd~-~~~~L~r~AD 145 (157)
-|+ .+++|||+ +|-.-.+.|-
T Consensus 114 ~~~~~~~~~~vGD~~~Di~~a~~aG 138 (179)
T 3l8h_A 114 YDVDLAGVPAVGDSLRDLQAAAQAG 138 (179)
T ss_dssp HTCCCTTCEEEESSHHHHHHHHHHT
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCC
Confidence 454 58888888 4444445554
No 61
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=91.05 E-value=0.63 Score=34.28 Aligned_cols=71 Identities=11% Similarity=0.053 Sum_probs=51.0
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc---chHHHHHHHHHcCCeEEEEcCCCchHHH
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS---DFVEVFQEATLRWLKMVVVGDMSDGALK 141 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs---DF~~~lr~Arer~l~tVVVGd~~~~~L~ 141 (157)
++..|.+.|+.+..+++- . ...+ ..=|+++++|-.- +-..+++.|+++|.++|.|-+..+..|.
T Consensus 55 ~~~~l~~~g~~~~~~~~~-~----------~~~~--~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~ 121 (186)
T 1m3s_A 55 FAMRLMHMGFNAHIVGEI-L----------TPPL--AEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIG 121 (186)
T ss_dssp HHHHHHHTTCCEEETTST-T----------CCCC--CTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHH
T ss_pred HHHHHHhcCCeEEEeCcc-c----------ccCC--CCCCEEEEEcCCCCcHHHHHHHHHHHHCCCEEEEEECCCCCchH
Confidence 345677899988887543 1 0111 2336777777543 4566788899999999999998667899
Q ss_pred hhhhccc
Q 045172 142 RIANAFF 148 (157)
Q Consensus 142 r~AD~~f 148 (157)
+.||..+
T Consensus 122 ~~ad~~l 128 (186)
T 1m3s_A 122 KQADLII 128 (186)
T ss_dssp HHCSEEE
T ss_pred HhCCEEE
Confidence 9999876
No 62
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=90.97 E-value=0.35 Score=36.13 Aligned_cols=47 Identities=15% Similarity=0.237 Sum_probs=38.8
Q ss_pred CcceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhh---hhccc
Q 045172 102 RFGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRI---ANAFF 148 (157)
Q Consensus 102 ~v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~---AD~~f 148 (157)
.=|+++++|-. .+-.++++.|+++|.+||.|-+.....|.+. ||..|
T Consensus 113 ~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l 165 (199)
T 1x92_A 113 PGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEI 165 (199)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEE
Confidence 44777777754 4567788999999999999999877899999 99876
No 63
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=90.74 E-value=0.3 Score=35.83 Aligned_cols=70 Identities=14% Similarity=0.081 Sum_probs=50.3
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc---chHHHHHHHHHcCCeEEEEcCCCchHHH
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS---DFVEVFQEATLRWLKMVVVGDMSDGALK 141 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs---DF~~~lr~Arer~l~tVVVGd~~~~~L~ 141 (157)
++..|.+.|..|..++|- . ...+ ..=|+++++|-.- +...+++.|+++|.++|.|-+..+. |.
T Consensus 58 ~~~~l~~~g~~~~~~~~~-~----------~~~~--~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s-l~ 123 (180)
T 1jeo_A 58 FAMRLMHLGFKSYFVGET-T----------TPSY--EKDDLLILISGSGRTESVLTVAKKAKNINNNIIAIVCECGN-VV 123 (180)
T ss_dssp HHHHHHHTTCCEEETTST-T----------CCCC--CTTCEEEEEESSSCCHHHHHHHHHHHTTCSCEEEEESSCCG-GG
T ss_pred HHHHHHHcCCeEEEeCCC-c----------cccC--CCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCh-HH
Confidence 345567889999887542 1 0111 2337788888654 4566788899999999999998667 99
Q ss_pred hhhhccc
Q 045172 142 RIANAFF 148 (157)
Q Consensus 142 r~AD~~f 148 (157)
+.||..+
T Consensus 124 ~~ad~~l 130 (180)
T 1jeo_A 124 EFADLTI 130 (180)
T ss_dssp GGCSEEE
T ss_pred HhCCEEE
Confidence 9999876
No 64
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=90.63 E-value=0.24 Score=37.95 Aligned_cols=79 Identities=13% Similarity=0.153 Sum_probs=51.9
Q ss_pred HHhhceEEEEecCCCcc----H----HHHHHHHHHHHhhccCcceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCc
Q 045172 69 LKRAWFWVRMVLVKPQD----A----DVLLRNYMVAMVDKRRFGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSD 137 (157)
Q Consensus 69 LrRAGv~V~~V~dkpqA----A----D~AL~~~~~~~~~~r~v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~ 137 (157)
+.+.|+.+..++|.... . +..++......+ ..=|+++++|-. .+-.++++.|+++|.+||.|-+..+
T Consensus 92 ~~~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~DvvI~iS~SG~t~~~i~~~~~ak~~G~~vIaIT~~~~ 169 (212)
T 2i2w_A 92 ENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVG--REGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDG 169 (212)
T ss_dssp TTSSSCSEEECCCTTCGGGGSCCCSCSSHHHHHHHHHC--CTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEEETTC
T ss_pred ccCCCCeEEecCChHHhhHhhccCCHHHHHHHHHHhcC--CCCCEEEEEECCCCCHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 34578888776633210 0 011222222223 345788888754 4567788899999999999999867
Q ss_pred hHHHhhhhcccc
Q 045172 138 GALKRIANAFFS 149 (157)
Q Consensus 138 ~~L~r~AD~~fs 149 (157)
..|.+.||.-|.
T Consensus 170 s~La~~aD~~l~ 181 (212)
T 2i2w_A 170 GKMAGTADIEIR 181 (212)
T ss_dssp GGGTTCSSEEEE
T ss_pred CchHHhCCEEEE
Confidence 889999998763
No 65
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=90.62 E-value=0.33 Score=36.92 Aligned_cols=71 Identities=23% Similarity=0.214 Sum_probs=52.3
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHH
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALK 141 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~ 141 (157)
++..|.+.|..|..++|- .+ ..+ ..=|+++++|-. .+-.++++.|+++|+++|.|-+.....|.
T Consensus 65 ~~~~l~~~g~~~~~~~~~-~~----------~~~--~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La 131 (200)
T 1vim_A 65 FAMRLMHLGYTVYVVGET-VT----------PRI--TDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLA 131 (200)
T ss_dssp HHHHHHHTTCCEEETTST-TC----------CCC--CTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEESCTTSHHH
T ss_pred HHHHHHhcCCeEEEeCCc-cc----------cCC--CCCCEEEEEeCCCCcHHHHHHHHHHHHCCCeEEEEECCCCChHH
Confidence 344677889988887542 10 011 233788888854 45677888999999999999998678999
Q ss_pred hhhhccc
Q 045172 142 RIANAFF 148 (157)
Q Consensus 142 r~AD~~f 148 (157)
+.||..|
T Consensus 132 ~~ad~~l 138 (200)
T 1vim_A 132 KMADVVM 138 (200)
T ss_dssp HHCSEEE
T ss_pred HhCCEEE
Confidence 9999877
No 66
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=90.18 E-value=0.25 Score=37.16 Aligned_cols=76 Identities=11% Similarity=0.192 Sum_probs=51.3
Q ss_pred HHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc---chHHHHHHHHHcCCeEEEEcCCCchHHHh
Q 045172 66 ADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS---DFVEVFQEATLRWLKMVVVGDMSDGALKR 142 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs---DF~~~lr~Arer~l~tVVVGd~~~~~L~r 142 (157)
+..|.+.|..+..+++ .+ ........+ ..=|+++++|-.- +-..+++.|+++|.++|.|-+.....|.+
T Consensus 64 ~~~l~~~g~~~~~~~~----~~--~~~~~~~~~--~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~ 135 (201)
T 3fxa_A 64 VHSFNCIERPAVFLTP----SD--AVHGTLGVL--QKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAK 135 (201)
T ss_dssp HHHHHHTTCCEEECCH----HH--HTTTGGGGC--CTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEEEEESCTTSHHHH
T ss_pred HHHHHhcCCcEEEeCc----hH--HHhhhhhcC--CCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEEEECCCCChhHH
Confidence 3457788998888643 11 110001112 1227888887653 45567789999999999999987789999
Q ss_pred hhhcccc
Q 045172 143 IANAFFS 149 (157)
Q Consensus 143 ~AD~~fs 149 (157)
.||..+.
T Consensus 136 ~ad~~l~ 142 (201)
T 3fxa_A 136 EADIFFP 142 (201)
T ss_dssp HCSEEEE
T ss_pred hCCEEEE
Confidence 9998873
No 67
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=89.96 E-value=0.41 Score=35.11 Aligned_cols=76 Identities=7% Similarity=0.089 Sum_probs=52.1
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhc-cCcceEEEEcCCc---chHHHHHHHHHcCCeEEEEcCCCchHH
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDK-RRFGCLVVVSDDS---DFVEVFQEATLRWLKMVVVGDMSDGAL 140 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~-r~v~clvLVSDDs---DF~~~lr~Arer~l~tVVVGd~~~~~L 140 (157)
++..|.+.|..+..+++- + .+ ...+.. ..=|+++++|-.- +-.++++.|+++|.++|.|-+..+..|
T Consensus 67 ~~~~l~~~g~~~~~~~~~----~-~~----~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l 137 (183)
T 2xhz_A 67 MAATFASTGTPSFFVHPG----E-AA----HGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSM 137 (183)
T ss_dssp HHHHHHTTTCCEEECCTT----H-HH----HHTSTTCCTTCEEEEECSSSCCHHHHHHHHHHHTTTCCEEEEESCTTSHH
T ss_pred HHHHHHhcCceEEEeCch----H-Hh----hhhhccCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChh
Confidence 345677889988887532 1 11 111111 2337888888643 456677889999999999999867899
Q ss_pred Hhhhhcccc
Q 045172 141 KRIANAFFS 149 (157)
Q Consensus 141 ~r~AD~~fs 149 (157)
.+.||..+.
T Consensus 138 a~~ad~~l~ 146 (183)
T 2xhz_A 138 ARAADVHLC 146 (183)
T ss_dssp HHHSSEEEE
T ss_pred HHhCCEEEE
Confidence 999998763
No 68
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=89.81 E-value=0.51 Score=35.08 Aligned_cols=47 Identities=19% Similarity=0.279 Sum_probs=38.1
Q ss_pred CcceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhh---hhccc
Q 045172 102 RFGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRI---ANAFF 148 (157)
Q Consensus 102 ~v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~---AD~~f 148 (157)
.=|+++.+|-. .+-.++++.|+++|.+||.|-+.....|.+. ||..+
T Consensus 109 ~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l 161 (196)
T 2yva_A 109 AGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEI 161 (196)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEE
Confidence 44777777754 4567788899999999999999866889998 88866
No 69
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=89.81 E-value=0.66 Score=42.13 Aligned_cols=77 Identities=17% Similarity=0.084 Sum_probs=58.7
Q ss_pred HHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC-CchHHHhhhh
Q 045172 67 DELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM-SDGALKRIAN 145 (157)
Q Consensus 67 ~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~-~~~~L~r~AD 145 (157)
.+|+++|+.|-+++..+... +...+...|++.++.-....+=..+++...+. -.++.|||+ +|-.--+.||
T Consensus 467 ~~L~~~Gi~v~~~TGd~~~~-------a~~ia~~lgi~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~ 538 (645)
T 3j08_A 467 QELKRMGIKVGMITGDNWRS-------AEAISRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQAD 538 (645)
T ss_dssp HHHHHTTCEEEEECSSCHHH-------HHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSS
T ss_pred HHHHHCCCEEEEEeCCCHHH-------HHHHHHHcCCCEEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCC
Confidence 56889999999998887622 22233456787777666677888889888887 778999999 8877778899
Q ss_pred cccchh
Q 045172 146 AFFSWS 151 (157)
Q Consensus 146 ~~fsW~ 151 (157)
+.+.+.
T Consensus 539 vgiamg 544 (645)
T 3j08_A 539 LGIAVG 544 (645)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 988774
No 70
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=89.78 E-value=0.13 Score=39.73 Aligned_cols=68 Identities=12% Similarity=-0.041 Sum_probs=50.2
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++++.|+.+........ ..-...+.+.+..+++|.|++.+.+.+= .+..+.+.|+.+|+||..
T Consensus 34 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdGiIi~~~~~~~--~~~~~~~~~iPvV~~~~~ 101 (301)
T 3miz_A 34 RGIQDWANANGKTILIANTGGS---SEREVEIWKMFQSHRIDGVLYVTMYRRI--VDPESGDVSIPTVMINCR 101 (301)
T ss_dssp HHHHHHHHHTTCEEEEEECTTC---HHHHHHHHHHHHHTTCSEEEEEEEEEEE--CCCCCTTCCCCEEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEeCCCC---hHHHHHHHHHHHhCCCCEEEEecCCccH--HHHHHHhCCCCEEEECCC
Confidence 4578899999999988654322 3334455556668999999998865443 677788899999999865
No 71
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=89.68 E-value=1.1 Score=33.61 Aligned_cols=79 Identities=13% Similarity=0.069 Sum_probs=49.3
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC-CchHHHhh
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM-SDGALKRI 143 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~-~~~~L~r~ 143 (157)
+-.+|+..|+.+-.++.+|... ...+. ...|++..+-..-.++=+..++..-+.. .+++|||+ +|-...+.
T Consensus 152 ~l~~l~~~g~~~~i~T~~~~~~----~~~~~---~~~gl~~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~ 223 (280)
T 3skx_A 152 AISKLKAIGIKCMMLTGDNRFV----AKWVA---EELGLDDYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQ 223 (280)
T ss_dssp HHHHHHHTTCEEEEECSSCHHH----HHHHH---HHHTCSEEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHH----HHHHH---HHcCChhHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHh
Confidence 3457888899999998888621 12222 2335543332222234445555555543 88999999 77777888
Q ss_pred hhcccchh
Q 045172 144 ANAFFSWS 151 (157)
Q Consensus 144 AD~~fsW~ 151 (157)
|++.+.|.
T Consensus 224 Ag~~va~~ 231 (280)
T 3skx_A 224 ADVGIAIG 231 (280)
T ss_dssp SSEEEECS
T ss_pred CCceEEec
Confidence 88877774
No 72
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=89.66 E-value=1.2 Score=31.54 Aligned_cols=75 Identities=9% Similarity=-0.038 Sum_probs=43.2
Q ss_pred HHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCC---eEEEEcCC-CchHHH
Q 045172 66 ADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWL---KMVVVGDM-SDGALK 141 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l---~tVVVGd~-~~~~L~ 141 (157)
-..|++.|+.+-.++..|.. .+...+...|++.++-.. -++-..+...+++-|+ .+++|||+ +|-...
T Consensus 40 l~~l~~~g~~~~i~T~~~~~-------~~~~~~~~~gl~~~~~~~-kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~ 111 (164)
T 3e8m_A 40 IFWAHNKGIPVGILTGEKTE-------IVRRRAEKLKVDYLFQGV-VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLL 111 (164)
T ss_dssp HHHHHHTTCCEEEECSSCCH-------HHHHHHHHTTCSEEECSC-SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHH
T ss_pred HHHHHHCCCEEEEEeCCChH-------HHHHHHHHcCCCEeeccc-CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence 57789999999999998861 122222344665433222 2222233333333443 68888888 665666
Q ss_pred hhhhccc
Q 045172 142 RIANAFF 148 (157)
Q Consensus 142 r~AD~~f 148 (157)
+.|++.+
T Consensus 112 ~~ag~~~ 118 (164)
T 3e8m_A 112 KRVGIAG 118 (164)
T ss_dssp TTSSEEE
T ss_pred HHCCCeE
Confidence 6666554
No 73
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=89.64 E-value=0.93 Score=35.10 Aligned_cols=75 Identities=13% Similarity=-0.026 Sum_probs=47.0
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH-cC---CeEEEEcCC-CchH
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL-RW---LKMVVVGDM-SDGA 139 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are-r~---l~tVVVGd~-~~~~ 139 (157)
+-.+|+.+|+.+-.++.+|.. .... .+...|++.++-.. .+=.++++.+.+ -| -.+++|||+ +|-.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~----~~~~---~l~~lgi~~~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~ 154 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAK----LLED---RANTLGITHLYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWP 154 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCH----HHHH---HHHHHTCCEEECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred HHHHHHHCCCEEEEEeCCCHH----HHHH---HHHHcCCchhhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHH
Confidence 447899999999999999872 1122 22334665433322 233455555544 34 468999999 6666
Q ss_pred HHhhhhccc
Q 045172 140 LKRIANAFF 148 (157)
Q Consensus 140 L~r~AD~~f 148 (157)
..+.|++.+
T Consensus 155 ~~~~ag~~~ 163 (211)
T 3ij5_A 155 VMAQVGLSV 163 (211)
T ss_dssp HHTTSSEEE
T ss_pred HHHHCCCEE
Confidence 677777654
No 74
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=89.38 E-value=1 Score=35.39 Aligned_cols=79 Identities=15% Similarity=0.065 Sum_probs=49.7
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC-CchHHHhh
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM-SDGALKRI 143 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~-~~~~L~r~ 143 (157)
+-..|+..|+.+-.++..|... ...+. ...|++.++-..-..+....++..... -.+++|||+ +|-...+.
T Consensus 171 ~l~~L~~~g~~~~i~T~~~~~~----~~~~l---~~~gl~~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ 242 (287)
T 3a1c_A 171 AVQELKRMGIKVGMITGDNWRS----AEAIS---RELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQ 242 (287)
T ss_dssp HHHHHHHTTCEEEEECSSCHHH----HHHHH---HHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCCHHH----HHHHH---HHhCCceeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHH
Confidence 4457888999999999998731 12222 223554332111123566666666655 679999999 66667777
Q ss_pred hhcccchh
Q 045172 144 ANAFFSWS 151 (157)
Q Consensus 144 AD~~fsW~ 151 (157)
|++.+.|.
T Consensus 243 ag~~v~~~ 250 (287)
T 3a1c_A 243 ADLGIAVG 250 (287)
T ss_dssp SSEEEEEC
T ss_pred CCeeEEeC
Confidence 88776663
No 75
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=89.23 E-value=0.53 Score=36.55 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=54.1
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCC---cchHHHHHHHHH--cCCeEEEEcCCCchH
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD---SDFVEVFQEATL--RWLKMVVVGDMSDGA 139 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD---sDF~~~lr~Are--r~l~tVVVGd~~~~~ 139 (157)
++..|.+.|+.+..+++.-... .....+ ..=|+++++|-. .+-..+++.|++ +|.++|.|-+.....
T Consensus 77 ~~~~l~~lg~~~~~~~~~~~~~------~~~~~~--~~~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~ 148 (220)
T 3etn_A 77 IATTFCSTGIPSVFLHPSEAQH------GDLGIL--QENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSP 148 (220)
T ss_dssp HHHHHHHTTCCEEECCTTGGGB------TGGGGC--CTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTTSH
T ss_pred HHHHHHhcCCcEEEeCCHHHHH------hhhccC--CCCCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCCCh
Confidence 4556889999998875432100 001112 223778887754 456678899999 999999999987789
Q ss_pred HHhhhhcccc
Q 045172 140 LKRIANAFFS 149 (157)
Q Consensus 140 L~r~AD~~fs 149 (157)
|.+.||..+.
T Consensus 149 La~~aD~~l~ 158 (220)
T 3etn_A 149 LASESDVCLS 158 (220)
T ss_dssp HHHHSSEEEE
T ss_pred hHHhCCEEEE
Confidence 9999998774
No 76
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=89.16 E-value=1.3 Score=33.79 Aligned_cols=75 Identities=8% Similarity=0.006 Sum_probs=46.1
Q ss_pred HHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCC---eEEEEcCC-CchHHH
Q 045172 66 ADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWL---KMVVVGDM-SDGALK 141 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l---~tVVVGd~-~~~~L~ 141 (157)
-..|+.+|+.+-.++.+|.. .+...+...|++.++--. .+.-..+...+.+-|+ .+++|||+ +|-...
T Consensus 61 l~~L~~~G~~~~ivT~~~~~-------~~~~~l~~lgi~~~~~~~-k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~ 132 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQ-------IVENRMKALGISLIYQGQ-DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVM 132 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCH-------HHHHHHHHTTCCEEECSC-SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHH
T ss_pred HHHHHHCCCEEEEEECcCHH-------HHHHHHHHcCCcEEeeCC-CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH
Confidence 36789999999999998872 112222345665443222 3333444444455565 68999999 666666
Q ss_pred hhhhccc
Q 045172 142 RIANAFF 148 (157)
Q Consensus 142 r~AD~~f 148 (157)
+.|++.+
T Consensus 133 ~~ag~~v 139 (195)
T 3n07_A 133 EKVALRV 139 (195)
T ss_dssp TTSSEEE
T ss_pred HHCCCEE
Confidence 6666554
No 77
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=88.84 E-value=0.44 Score=36.69 Aligned_cols=48 Identities=19% Similarity=0.259 Sum_probs=39.8
Q ss_pred cCcceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhh---hccc
Q 045172 101 RRFGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIA---NAFF 148 (157)
Q Consensus 101 r~v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~A---D~~f 148 (157)
..=|+++.+|-. .+-..+++.|+++|.++|.|-+.....|.+.| |..+
T Consensus 113 ~~~Dvvi~iS~SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l 166 (201)
T 3trj_A 113 NEDDILLVITTSGDSENILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDIEL 166 (201)
T ss_dssp CTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEE
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEE
Confidence 345888888864 56778889999999999999887668999999 9866
No 78
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=88.74 E-value=0.24 Score=37.92 Aligned_cols=64 Identities=5% Similarity=0.021 Sum_probs=46.7
Q ss_pred CCcHHHHHhhceE-EEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFW-VRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~-V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++++.|+. +........ ..-...+.+.+..+++|.|++.+ +.+..+.+.|..+|+++..
T Consensus 30 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiIi~~------~~~~~~~~~~iPvV~~~~~ 94 (277)
T 3hs3_A 30 DGIQEVIQKEGYTALISFSTNSD---VKKYQNAIINFENNNVDGIITSA------FTIPPNFHLNTPLVMYDSA 94 (277)
T ss_dssp HHHHHHHHHTTCEEEEEECSSCC---HHHHHHHHHHHHHTTCSEEEEEC------CCCCTTCCCSSCEEEESCC
T ss_pred HHHHHHHHHCCCCEEEEEeCCCC---hHHHHHHHHHHHhCCCCEEEEcc------hHHHHHHhCCCCEEEEccc
Confidence 4678889999999 766544433 33345555556689999999998 2355677889999999875
No 79
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=88.48 E-value=1.8 Score=34.17 Aligned_cols=69 Identities=12% Similarity=0.071 Sum_probs=45.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH-cCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL-RWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are-r~l~tVVVGd~ 135 (157)
.|+..++...|+.+.......+ ..-.....+.+..+++|.|++.+.+.+ ..++....+ .|..+|+++..
T Consensus 78 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~~iPvV~~~~~ 147 (340)
T 1qpz_A 78 EAVEKNCFQKGYTLILGNAWNN---LEKQRAYLSMMAQKRVDGLLVMCSEYP-EPLLAMLEEYRHIPMVVMDWG 147 (340)
T ss_dssp HHHHHHHHHTTCEEEEEECTTC---HHHHHHHHHHHHHTTCSEEEECCSCCC-HHHHHHHHTTTTSCEEEEEES
T ss_pred HHHHHHHHHcCCEEEEEeCCCC---HHHHHHHHHHHHcCCCCEEEEeCCCCC-hHHHHHHHhhCCCCEEEEecc
Confidence 4778888999999877543322 233334444544789999999876543 133444444 79999999865
No 80
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=88.20 E-value=0.16 Score=38.39 Aligned_cols=70 Identities=11% Similarity=0.019 Sum_probs=40.3
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..++++.|+.+.......+... .....+.+..+++|.+++.+.+.+ ...++.+++.|..+|+++...
T Consensus 19 ~gi~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~~~~~~iPvV~~~~~~ 88 (276)
T 2h0a_A 19 EGIEGVLLEQRYDLALFPILSLARL---KRYLENTTLAYLTDGLILASYDLT-ERFEEGRLPTERPVVLVDAQN 88 (276)
T ss_dssp HHHHHHHGGGTCEEEECCCCSCCCC---C---------CCCSEEEEESCCCC-------CCSCSSCEEEESSCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCchhh---HHHHHHHHHhCCCCEEEEecCCCC-HHHHHHHhhcCCCEEEEeccC
Confidence 5777888999998877643322111 122333333689999999876654 367788888999999998753
No 81
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=87.74 E-value=0.9 Score=36.34 Aligned_cols=69 Identities=10% Similarity=0.054 Sum_probs=46.8
Q ss_pred CcHHHHHhhceEEEE---ecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCe---EEEEcCC
Q 045172 64 GFADELKRAWFWVRM---VLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLK---MVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~~---V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~---tVVVGd~ 135 (157)
|+...|+++|..|.. ++..+...|.. ..+.+++ ..+.+.|++.+++.+-..+++.+++.|++ ..++|..
T Consensus 159 ~~~~~l~~~G~~v~~~~~~~~~~~~~d~~--~~~~~l~-~~~pdaI~~~~~~~~a~~~~~~~~~~G~~~~~~~~~~~~ 233 (385)
T 1pea_A 159 VMRHLYRQHGGTVLEEIYIPLYPSDDDLQ--RAVERIY-QARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLT 233 (385)
T ss_dssp HHHHHHHHTTCEEEEEEEECSSCCHHHHH--HHHHHHH-HHTCSEEEEECCTHHHHHHHHHHHHHHCSSCCCCEEESS
T ss_pred HHHHHHHHcCCEEEEEEeecCCCCcchHH--HHHHHHH-HCCCCEEEEecccccHHHHHHHHHHcCCCcCCceEEecc
Confidence 345677788876542 33223444543 3444444 45899999998888999999999999988 4456654
No 82
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=87.49 E-value=0.79 Score=42.66 Aligned_cols=77 Identities=16% Similarity=0.063 Sum_probs=54.9
Q ss_pred HHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC-CchHHHhhhh
Q 045172 67 DELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM-SDGALKRIAN 145 (157)
Q Consensus 67 ~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~-~~~~L~r~AD 145 (157)
.+|+++|+.|-+++..+... +...+...|++.++.-....|=..+++..++.|-.+..|||+ +|-.--+.||
T Consensus 564 ~~L~~~Gi~v~mlTGd~~~~-------a~~ia~~lgi~~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~Ad 636 (736)
T 3rfu_A 564 LELQQSGIEIVMLTGDSKRT-------AEAVAGTLGIKKVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKAD 636 (736)
T ss_dssp HHHHHHTCEEEEECSSCHHH-------HHHHHHHHTCCCEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSS
T ss_pred HHHHHCCCeEEEECCCCHHH-------HHHHHHHcCCCEEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCC
Confidence 46788888888887766521 122233456766555455567788999999999999999999 7766667788
Q ss_pred cccch
Q 045172 146 AFFSW 150 (157)
Q Consensus 146 ~~fsW 150 (157)
+.+.-
T Consensus 637 vGIAm 641 (736)
T 3rfu_A 637 IGIAM 641 (736)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87643
No 83
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=87.35 E-value=1.5 Score=32.90 Aligned_cols=73 Identities=18% Similarity=0.082 Sum_probs=47.0
Q ss_pred HHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCC---eEEEEcCC-CchHHHh
Q 045172 67 DELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWL---KMVVVGDM-SDGALKR 142 (157)
Q Consensus 67 ~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l---~tVVVGd~-~~~~L~r 142 (157)
.+|++.|+.+-.++.+ ..+...+ +.+ ..+++ +.....+.-..+...+.+.|+ .++.|||+ +|-...+
T Consensus 46 ~~Lk~~Gi~~~I~Tg~-~~~~~~l-----~~l-~lgi~--~~~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~ 116 (168)
T 3ewi_A 46 SLLKKSGIEVRLISER-ACSKQTL-----SAL-KLDCK--TEVSVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLK 116 (168)
T ss_dssp HHHHHTTCEEEEECSS-CCCHHHH-----HTT-CCCCC--EECSCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHH
T ss_pred HHHHHCCCEEEEEeCc-HHHHHHH-----HHh-CCCcE--EEECCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHH
Confidence 6899999999999988 4333222 222 45777 334444444455555555665 68999999 7666666
Q ss_pred hhhccc
Q 045172 143 IANAFF 148 (157)
Q Consensus 143 ~AD~~f 148 (157)
.|.+.+
T Consensus 117 ~ag~~~ 122 (168)
T 3ewi_A 117 RVGLSA 122 (168)
T ss_dssp HSSEEE
T ss_pred HCCCEE
Confidence 666654
No 84
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=86.35 E-value=1.9 Score=34.31 Aligned_cols=71 Identities=13% Similarity=-0.010 Sum_probs=44.2
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++...|+.+........ |........+.+..+++|.|++++...+-..+...+...|..+|+++..
T Consensus 81 ~gi~~~a~~~g~~~~~~~~~~~--~~~~~~~~l~~l~~~~vdGiIi~~~~~~~~~~~~~~~~~~iPvV~i~~~ 151 (349)
T 1jye_A 81 AAILSRADQLGASVVVSMVERS--GVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVS 151 (349)
T ss_dssp HHHHHHHHHTTCEEEEEECCSS--SHHHHHHHHHHHHTTTCSCEEEESCCCHHHHHHHHHHTTTSCEEESSSC
T ss_pred HHHHHHHHHcCCEEEEEeCCCC--cHHHHHHHHHHHHHCCCCEEEEecCCCChhHHHHHHhhCCCCEEEEccc
Confidence 4778889999998877543221 1122223334444789999999843222223445566789999999753
No 85
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=85.96 E-value=2 Score=32.54 Aligned_cols=63 Identities=29% Similarity=0.394 Sum_probs=48.6
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHH-HHHHHHHcCCeEEEE
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVE-VFQEATLRWLKMVVV 132 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~-~lr~Arer~l~tVVV 132 (157)
+-+.++..||.|+||.. || -|+..+.+...+.+..-+|+|-||.++++ .+|+.+.-|..+.+|
T Consensus 18 fkdiikkngfkvrtvrs-pq----elkdsieelvkkynativvvvvddkewaekairfvkslgaqvlii 81 (134)
T 2l69_A 18 FKDIIKKNGFKVRTVRS-PQ----ELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLII 81 (134)
T ss_dssp HHHHHHHTTCEEEEECS-HH----HHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEE
T ss_pred HHHHHHhcCceEEEecC-HH----HHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEE
Confidence 34678999999999854 65 57788888887888888888999988875 567777777776544
No 86
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=85.90 E-value=2.3 Score=31.57 Aligned_cols=75 Identities=11% Similarity=-0.044 Sum_probs=42.3
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH-cC---CeEEEEcCC-CchH
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL-RW---LKMVVVGDM-SDGA 139 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are-r~---l~tVVVGd~-~~~~ 139 (157)
+-.+|+..|+.+-.++.+|... +...+...|++-++-.. .+=.+.++.+.+ -| -.+++|||+ +|-.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~-------~~~~~~~lgl~~~f~~~--~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~ 124 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAI-------VERRAKSLGIEHLFQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLP 124 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHH-------HHHHHHHHTCSEEECSC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred HHHHHHHCCCEEEEEECcChHH-------HHHHHHHcCCHHHhcCc--CChHHHHHHHHHHcCCChhHEEEECCCHHHHH
Confidence 4578999999999999998721 11122233554322111 111244444433 34 358888888 6656
Q ss_pred HHhhhhccc
Q 045172 140 LKRIANAFF 148 (157)
Q Consensus 140 L~r~AD~~f 148 (157)
..+.|++.+
T Consensus 125 ~~~~ag~~~ 133 (189)
T 3mn1_A 125 VIRRVGLGM 133 (189)
T ss_dssp HHHHSSEEE
T ss_pred HHHHCCCeE
Confidence 666666655
No 87
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=85.57 E-value=2.9 Score=31.17 Aligned_cols=75 Identities=11% Similarity=-0.040 Sum_probs=40.6
Q ss_pred HHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCC---eEEEEcCC-CchHHH
Q 045172 66 ADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWL---KMVVVGDM-SDGALK 141 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l---~tVVVGd~-~~~~L~ 141 (157)
-..|+..|+.+-.++..|.. .+ ...+...|++.++-.. -+.-..+.+.++.-|+ .+++|||+ +|-...
T Consensus 55 l~~L~~~g~~~~ivTn~~~~---~~----~~~l~~lgl~~~~~~~-kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~ 126 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNA---VV----DHRMEQLGITHYYKGQ-VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLI 126 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSH---HH----HHHHHHHTCCEEECSC-SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred HHHHHHCCCeEEEEeCcChH---HH----HHHHHHcCCccceeCC-CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence 46789999999999988862 11 1122233554322111 1222333333333454 58888887 555555
Q ss_pred hhhhccc
Q 045172 142 RIANAFF 148 (157)
Q Consensus 142 r~AD~~f 148 (157)
+.|++.+
T Consensus 127 ~~ag~~~ 133 (191)
T 3n1u_A 127 QQVGLGV 133 (191)
T ss_dssp HHSSEEE
T ss_pred HHCCCEE
Confidence 5555544
No 88
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=84.73 E-value=1 Score=34.83 Aligned_cols=68 Identities=16% Similarity=0.123 Sum_probs=45.0
Q ss_pred CcHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcC
Q 045172 64 GFADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGD 134 (157)
Q Consensus 64 gla~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd 134 (157)
|+..+|++.|..|... .-.+...|.. ..+.+++ ..+.+.|++.+++.+...+++.+++.|++.-++|-
T Consensus 157 ~~~~~l~~~g~~v~~~~~~~~~~~d~~--~~~~~l~-~~~~d~i~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 225 (346)
T 1usg_A 157 SVQDGLKAANANVVFFDGITAGEKDFS--ALIARLK-KENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 225 (346)
T ss_dssp HHHHHHHHTTCCEEEEEECCTTCCCCH--HHHHHHH-HTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHHHcCCEEEEEeccCCCCcCHH--HHHHHHH-hcCCCEEEEcCcchHHHHHHHHHHHcCCCCeEEec
Confidence 3456677888765431 2122223332 2334444 46889999999889999999999999998766663
No 89
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=84.58 E-value=0.9 Score=35.64 Aligned_cols=69 Identities=10% Similarity=0.117 Sum_probs=45.9
Q ss_pred CcHHHHHhhceEEE-EecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 64 GFADELKRAWFWVR-MVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~-~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
|+..+|+.+|..|- ...-.+...|.. ..+..+. ..+.+.|++.+.|.+-..+++.+++.|++.-++|.+
T Consensus 170 ~~~~~l~~~G~~v~~~~~~~~~~~d~~--~~~~~l~-~~~~dai~~~~~~~~a~~~~~~~~~~g~~vp~~~~~ 239 (375)
T 4evq_A 170 GFKKSFTAGKGEVVKDITIAFPDVEFQ--SALAEIA-SLKPDCVYAFFSGGGALKFIKDYAAANLGIPLWGPG 239 (375)
T ss_dssp HHHHHHHHTTCEEEEEEEECTTCCCCH--HHHHHHH-HHCCSEEEEECCTHHHHHHHHHHHHTTCCCCEEEEG
T ss_pred HHHHHHHHcCCeEEEEEecCCCCccHH--HHHHHHH-hcCCCEEEEecCcchHHHHHHHHHHcCCCceEEecC
Confidence 45567788887653 222122223322 2223333 458899999899999999999999999998888753
No 90
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=84.26 E-value=0.76 Score=35.01 Aligned_cols=67 Identities=9% Similarity=0.138 Sum_probs=44.8
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+.+....... |......+.+.+..+++|.|++.+.+.+- ..++.+ .|..+|+++..
T Consensus 27 ~gi~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgiI~~~~~~~~-~~~~~l--~~iPvV~~~~~ 93 (288)
T 2qu7_A 27 TEISHECQKHHLHVAVASSEE---NEDKQQDLIETFVSQNVSAIILVPVKSKF-QMKREW--LKIPIMTLDRE 93 (288)
T ss_dssp HHHHHHHGGGTCEEEEEECTT---CHHHHHHHHHHHHHTTEEEEEECCSSSCC-CCCGGG--GGSCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCC---CHHHHHHHHHHHHHcCccEEEEecCCCCh-HHHHHh--cCCCEEEEecc
Confidence 467778888999887765433 23333444555447899999998765431 334444 78999999865
No 91
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=84.24 E-value=0.51 Score=36.72 Aligned_cols=46 Identities=17% Similarity=0.202 Sum_probs=36.9
Q ss_pred cceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCch-----------HHHhhhhccc
Q 045172 103 FGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDG-----------ALKRIANAFF 148 (157)
Q Consensus 103 v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~-----------~L~r~AD~~f 148 (157)
=|+++++|-. .+-.++++.|+++|++||.|-+.... .|.+.||+.|
T Consensus 109 ~Dv~I~iS~SG~t~~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l 168 (243)
T 3cvj_A 109 KDVIMIISNSGRNTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVL 168 (243)
T ss_dssp TCEEEEECSSCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEE
Confidence 3788888754 56778889999999999999886323 7999999877
No 92
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=84.00 E-value=1.1 Score=35.67 Aligned_cols=67 Identities=13% Similarity=0.075 Sum_probs=45.1
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
|+..++. |+.+..+...++..+ -...+.+.+..+++|.|++++.+.+ ...+..+.+.|+.+|+||..
T Consensus 94 gi~~~a~--g~~~~~~~~~~~~~~--~~~~~~~~l~~~~vdGiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~ 160 (366)
T 3h5t_A 94 GVAQAAG--DTQLTLIPASPASSV--DHVSAQQLVNNAAVDGVVIYSVAKG-DPHIDAIRARGLPAVIADQP 160 (366)
T ss_dssp HHHHHSS--SCEEEEEECCCCTTC--CHHHHHHHHHTCCCSCEEEESCCTT-CHHHHHHHHHTCCEEEESSC
T ss_pred HHHHHHh--hCCEEEEEcCCCccH--HHHHHHHHHHhCCCCEEEEecCCCC-hHHHHHHHHCCCCEEEECCc
Confidence 5556666 888777654443221 1233445555899999999876433 36778888899999999875
No 93
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=83.99 E-value=6.1 Score=28.52 Aligned_cols=22 Identities=27% Similarity=0.178 Sum_probs=17.8
Q ss_pred CCcHHHHHhhceEEEEecCCCc
Q 045172 63 YGFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpq 84 (157)
..+-.+|+..|+.+-.++..+.
T Consensus 110 ~~~l~~l~~~g~~~~i~s~~~~ 131 (237)
T 4ex6_A 110 LEGLDRLSAAGFRLAMATSKVE 131 (237)
T ss_dssp HHHHHHHHHTTEEEEEECSSCH
T ss_pred HHHHHHHHhCCCcEEEEcCCCh
Confidence 3456778889999999998876
No 94
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=83.77 E-value=1.2 Score=36.44 Aligned_cols=49 Identities=12% Similarity=0.066 Sum_probs=40.4
Q ss_pred CcceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccch
Q 045172 102 RFGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFSW 150 (157)
Q Consensus 102 ~v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fsW 150 (157)
.=|++|.+|-. .+-.++++.|+++|.+||.|.+.....|.+.||..|.-
T Consensus 140 ~~DvvI~IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~AD~~I~~ 191 (306)
T 1nri_A 140 KNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIADIAIET 191 (306)
T ss_dssp TTSEEEEECTTSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHHSSEEEEC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCChHHHhCCEEEEc
Confidence 34888888754 45678899999999999999998678999999988743
No 95
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=83.28 E-value=1.4 Score=36.96 Aligned_cols=46 Identities=11% Similarity=0.052 Sum_probs=37.8
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccc
Q 045172 104 GCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 104 ~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
|++|.+|-. .|-..+++.|+++|.+||.|-+..+..|.+.||..|.
T Consensus 109 dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 157 (375)
T 2zj3_A 109 DVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVH 157 (375)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHSSEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEECCCCChHHHhCCEeee
Confidence 677777753 4566788999999999999999867899999998763
No 96
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=82.70 E-value=2.8 Score=38.46 Aligned_cols=77 Identities=17% Similarity=0.084 Sum_probs=53.6
Q ss_pred HHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC-CchHHHhhhh
Q 045172 67 DELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM-SDGALKRIAN 145 (157)
Q Consensus 67 ~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~-~~~~L~r~AD 145 (157)
..|+++|+.|-+++..+... +.......|++.++.=....+=..+++..++. -.+..|||+ +|-.--+.||
T Consensus 545 ~~l~~~Gi~v~~~TGd~~~~-------a~~ia~~lgi~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~ 616 (723)
T 3j09_A 545 QELKRMGIKVGMITGDNWRS-------AEAISRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQAD 616 (723)
T ss_dssp HHHHHTTCEEEEECSSCHHH-------HHHHHHHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSS
T ss_pred HHHHHCCCEEEEECCCCHHH-------HHHHHHHcCCcEEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCC
Confidence 46788888888887766521 12223345776665555556778888888777 678999999 8766677899
Q ss_pred cccchh
Q 045172 146 AFFSWS 151 (157)
Q Consensus 146 ~~fsW~ 151 (157)
+.+...
T Consensus 617 vgiamg 622 (723)
T 3j09_A 617 LGIAVG 622 (723)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 887653
No 97
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=82.63 E-value=1.5 Score=36.37 Aligned_cols=75 Identities=8% Similarity=0.034 Sum_probs=49.8
Q ss_pred HHHHHh-hceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHH
Q 045172 66 ADELKR-AWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALK 141 (157)
Q Consensus 66 a~eLrR-AGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~ 141 (157)
+.-|.+ .|+.|..+.+ .+. .+....+ ..+-|+++.+|-. .|-..+++.|+++|.+++.|-+..+..|.
T Consensus 71 ~~~l~~~~g~~v~~~~~----~~~---~~~~~~~-~~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~La 142 (342)
T 1j5x_A 71 SYYFERVLKIRTKAIPA----GEV---AFQKIPD-LEERGLAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESRLA 142 (342)
T ss_dssp HHHHHHHHCCEEEEEEH----HHH---HTTCSCC-CCSSEEEEEECSSSCCHHHHHHHHHHHHTTEEEEEEESCTTSHHH
T ss_pred HHHHHHhhCCeEEEECc----hHH---HhcCccc-CCCCeEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHH
Confidence 445667 8988887642 111 0000001 1111677777753 46677889999999999999988678999
Q ss_pred hhhhccc
Q 045172 142 RIANAFF 148 (157)
Q Consensus 142 r~AD~~f 148 (157)
+.||..+
T Consensus 143 ~~ad~~l 149 (342)
T 1j5x_A 143 KESDLPL 149 (342)
T ss_dssp HHSSEEE
T ss_pred HhcCEEE
Confidence 9999866
No 98
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=82.52 E-value=6 Score=28.28 Aligned_cols=78 Identities=17% Similarity=0.174 Sum_probs=47.2
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcc-eEE--EEc-CCc-----------chHHHHHHHHHcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFG-CLV--VVS-DDS-----------DFVEVFQEATLRWL 127 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~-clv--LVS-DDs-----------DF~~~lr~Arer~l 127 (157)
-.+-.+|++. +.+-.++..|.. ....+.+ ..|++ +++ +++ ++. .|...++......-
T Consensus 75 ~~~l~~l~~~-~~~~i~s~~~~~----~~~~~l~---~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~ 146 (206)
T 1rku_A 75 VEFVDWLRER-FQVVILSDTFYE----FSQPLMR---QLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY 146 (206)
T ss_dssp HHHHHHHHTT-SEEEEEEEEEHH----HHHHHHH---HTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhc-CcEEEEECChHH----HHHHHHH---HcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCC
Confidence 3445667777 888888888751 2222332 33443 332 333 343 37777777776777
Q ss_pred eEEEEcCC-CchHHHhhhhccc
Q 045172 128 KMVVVGDM-SDGALKRIANAFF 148 (157)
Q Consensus 128 ~tVVVGd~-~~~~L~r~AD~~f 148 (157)
.+++|||+ +|-...+.|...+
T Consensus 147 ~~~~iGD~~~Di~~a~~aG~~~ 168 (206)
T 1rku_A 147 RVIAAGDSYNDTTMLSEAHAGI 168 (206)
T ss_dssp EEEEEECSSTTHHHHHHSSEEE
T ss_pred EEEEEeCChhhHHHHHhcCccE
Confidence 89999999 5555555665543
No 99
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=82.47 E-value=2.5 Score=33.37 Aligned_cols=67 Identities=9% Similarity=-0.024 Sum_probs=42.2
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHH-HHHHH-cCCeEEEEcCC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVF-QEATL-RWLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~l-r~Are-r~l~tVVVGd~ 135 (157)
|+...++..|+.+..++..+..+|. ...++.+-.+++|.|+++|. .+.+.+ ..+.+ .++.+|+|+..
T Consensus 28 gi~~~~~~~g~~~~~~~~~~~~~~~---~~~l~~l~~~~vdgIi~~~~--~~~~~~~~~~~~~p~~p~v~id~~ 96 (296)
T 2hqb_A 28 GLLNIHSNLDVDVVLEEGVNSEQKA---HRRIKELVDGGVNLIFGHGH--AFAEYFSTIHNQYPDVHFVSFNGE 96 (296)
T ss_dssp HHHHHHHHSCCEEEEECCCCSHHHH---HHHHHHHHHTTCCEEEECST--HHHHHHHTTTTSCTTSEEEEESCC
T ss_pred HHHHHHHHhCCeEEEEeCCCCHHHH---HHHHHHHHHCCCCEEEEcCH--hHHHHHHHHHHHCCCCEEEEEecC
Confidence 5667788889998877544443332 23344444789999999873 333333 33333 27889999764
No 100
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=82.37 E-value=0.73 Score=36.27 Aligned_cols=69 Identities=9% Similarity=0.035 Sum_probs=47.5
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
++...|+++|+.|....-.+...|.. ..+..+. ..+.+.|++.+.+.+...+++.+++.|++.-++|-.
T Consensus 169 ~~~~~~~~~G~~v~~~~~~~~~~d~~--~~~~~l~-~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~~ 237 (366)
T 3td9_A 169 FFINKFTELGGQVKRVFFRSGDQDFS--AQLSVAM-SFNPDAIYITGYYPEIALISRQARQLGFTGYILAGD 237 (366)
T ss_dssp HHHHHHHHTTCEEEEEEECTTCCCCH--HHHHHHH-HTCCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECG
T ss_pred HHHHHHHHCCCEEEEEEeCCCCccHH--HHHHHHH-hcCCCEEEEccchhHHHHHHHHHHHcCCCceEEeeC
Confidence 45567788887664432122233322 2233334 578999999899999999999999999998888753
No 101
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=82.37 E-value=0.59 Score=35.37 Aligned_cols=65 Identities=9% Similarity=0.063 Sum_probs=40.7
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..++++.|+.+..+... ... -...+.+.+..+++|.|+ ++.+.+ ...+.. .|..+|+++...
T Consensus 25 ~gi~~~a~~~g~~~~~~~~~-~~~---~~~~~~~~l~~~~vdgiI-~~~~~~-~~~~~~---~~iPvV~~~~~~ 89 (280)
T 3gyb_A 25 QSLSDVLTPKGYRLSVIDSL-TSQ---AGTDPITSALSMRPDGII-IAQDIP-DFTVPD---SLPPFVIAGTRI 89 (280)
T ss_dssp HHHHHHHGGGTCEEEEECSS-SSC---SSSCHHHHHHTTCCSEEE-EESCC------------CCCEEEESCCC
T ss_pred HHHHHHHHHCCCEEEEEeCC-Cch---HHHHHHHHHHhCCCCEEE-ecCCCC-hhhHhh---cCCCEEEECCCC
Confidence 46788899999999887554 211 122233334479999999 877766 344444 899999998764
No 102
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=82.31 E-value=1.3 Score=35.08 Aligned_cols=68 Identities=13% Similarity=0.002 Sum_probs=46.3
Q ss_pred cHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeE--EEEcCC
Q 045172 65 FADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKM--VVVGDM 135 (157)
Q Consensus 65 la~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~t--VVVGd~ 135 (157)
+...|+++|..|-.. .-.+...|.. ..+..+. ..+.+.|++.++..+...+++.+++.|++. .++|..
T Consensus 160 ~~~~~~~~G~~v~~~~~~~~~~~d~~--~~l~~i~-~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~g~~ 230 (375)
T 3i09_A 160 TADVVKANGGKVLGEVRHPLSASDFS--SFLLQAQ-SSKAQILGLANAGGDTVNAIKAAKEFGITKTMKLAALL 230 (375)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCSCCH--HHHHHHH-HTCCSEEEEECCHHHHHHHHHHHHHTTGGGTCEEEESS
T ss_pred HHHHHHHcCCEEeeeeeCCCCCccHH--HHHHHHH-hCCCCEEEEecCchhHHHHHHHHHHcCCCcCceEEecc
Confidence 455777888776422 2222333422 2333334 578999999998889999999999999987 578765
No 103
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=82.22 E-value=1.1 Score=35.04 Aligned_cols=69 Identities=13% Similarity=-0.040 Sum_probs=45.9
Q ss_pred CcHHHHHhhceEEE-EecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 64 GFADELKRAWFWVR-MVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~-~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
|+..+|+.+|+.|- ...-.+...|.. ..+..+. ..+.+.+++.+.+.+...+++.+++.|++.-++|..
T Consensus 157 ~~~~~l~~~g~~v~~~~~~~~~~~d~~--~~~~~l~-~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~~ 226 (356)
T 3ipc_A 157 ETKKAANAAGVTEVMYEGVNVGDKDFS--ALISKMK-EAGVSIIYWGGLHTEAGLIIRQAADQGLKAKLVSGD 226 (356)
T ss_dssp HHHHHHHHTTCCCSEEEECCTTCCCCH--HHHHHHH-HTTCCEEEEESCHHHHHHHHHHHHHHTCCCEEEECG
T ss_pred HHHHHHHHcCCEEEEEEeeCCCCCCHH--HHHHHHH-hcCCCEEEEccCchHHHHHHHHHHHCCCCCcEEEec
Confidence 45566777787542 222223333322 1222333 578999999999999999999999999998887743
No 104
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=81.89 E-value=1.8 Score=35.87 Aligned_cols=45 Identities=13% Similarity=0.229 Sum_probs=36.7
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhccc
Q 045172 104 GCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFF 148 (157)
Q Consensus 104 ~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~f 148 (157)
|+++.+|-. .|-..+++.|+++|.+||.|-+..+..|.+.||.-+
T Consensus 104 dlvI~iS~SG~t~e~~~a~~~ak~~Ga~vi~IT~~~~S~La~~ad~~l 151 (355)
T 2a3n_A 104 SVVITLSKSGDTKESVAIAEWCKAQGIRVVAITKNADSPLAQAATWHI 151 (355)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTCSEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCChhhHhCCEEE
Confidence 666667653 456778889999999999999986789999999866
No 105
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=81.81 E-value=5.9 Score=29.07 Aligned_cols=77 Identities=10% Similarity=-0.056 Sum_probs=45.5
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH-cCC---eEEEEcCC-CchH
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL-RWL---KMVVVGDM-SDGA 139 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are-r~l---~tVVVGd~-~~~~ 139 (157)
+-.+|+++|+.+-.++..|... ...+. ...|++-++ +....-...++.+.+ -|+ .++.|||+ +|-.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~----~~~~l---~~lgl~~~~--~~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~ 131 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKL----VEDRC---ATLGITHLY--QGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWP 131 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHH----HHHHH---HHHTCCEEE--CSCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHH
T ss_pred HHHHHHHCCCeEEEEeCCChHH----HHHHH---HHcCCceee--cCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 3567899999999999988731 12222 233555332 222333445554444 453 68899998 6666
Q ss_pred HHhhhhcccch
Q 045172 140 LKRIANAFFSW 150 (157)
Q Consensus 140 L~r~AD~~fsW 150 (157)
..+.|.+.+-|
T Consensus 132 ~a~~ag~~~~~ 142 (188)
T 2r8e_A 132 VMEKVGLSVAV 142 (188)
T ss_dssp HHTTSSEEEEC
T ss_pred HHHHCCCEEEe
Confidence 66666665544
No 106
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=81.52 E-value=3.3 Score=27.09 Aligned_cols=71 Identities=11% Similarity=-0.050 Sum_probs=49.1
Q ss_pred CCcHHHHHhhc-eEEEEecCCCccHHHHH-------------HHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCe
Q 045172 63 YGFADELKRAW-FWVRMVLVKPQDADVLL-------------RNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLK 128 (157)
Q Consensus 63 ygla~eLrRAG-v~V~~V~dkpqAAD~AL-------------~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~ 128 (157)
..++..|.+.| +.|..+...|+.++... ...+.+.+ .++|.++..........++..+.+.|.+
T Consensus 18 ~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d~vi~~~~~~~~~~~~~~~~~~g~~ 95 (118)
T 3ic5_A 18 QMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKAL--GGFDAVISAAPFFLTPIIAKAAKAAGAH 95 (118)
T ss_dssp HHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHT--TTCSEEEECSCGGGHHHHHHHHHHTTCE
T ss_pred HHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHH--cCCCEEEECCCchhhHHHHHHHHHhCCC
Confidence 45677888888 77777665555433322 12333444 3788888887766678899999999999
Q ss_pred EEEEcCC
Q 045172 129 MVVVGDM 135 (157)
Q Consensus 129 tVVVGd~ 135 (157)
.+.+++.
T Consensus 96 ~~~~~~~ 102 (118)
T 3ic5_A 96 YFDLTED 102 (118)
T ss_dssp EECCCSC
T ss_pred EEEecCc
Confidence 9888765
No 107
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=81.41 E-value=2.4 Score=31.54 Aligned_cols=66 Identities=9% Similarity=-0.032 Sum_probs=43.6
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCC-cchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD-SDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD-sDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+.+.......+ ..-.....+.+..+++|.+++.+.+ .+. + ...+.+..+|+++..
T Consensus 22 ~gi~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiI~~~~~~~~~-~---~l~~~~~pvV~~~~~ 88 (255)
T 1byk_A 22 QTMLPAFYEQGYDPIMMESQFS---PQLVAEHLGVLKRRNIDGVVLFGFTGITE-E---MLAHWQSSLVLLARD 88 (255)
T ss_dssp HHHHHHHHHHTCEEEEEECTTC---HHHHHHHHHHHHTTTCCEEEEECCTTCCT-T---TSGGGSSSEEEESSC
T ss_pred HHHHHHHHHcCCEEEEEeCCCc---HHHHHHHHHHHHhcCCCEEEEecCccccH-H---HHHhcCCCEEEEccc
Confidence 5778889999999887654333 2223344455557899999998743 332 2 234568888988764
No 108
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=81.23 E-value=9.4 Score=26.66 Aligned_cols=19 Identities=5% Similarity=0.013 Sum_probs=11.8
Q ss_pred HHHHHhhceEEEEecCCCc
Q 045172 66 ADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpq 84 (157)
-.+|++.|+.+-.++..|.
T Consensus 45 l~~l~~~g~~~~i~T~~~~ 63 (162)
T 2p9j_A 45 IKLLQKMGITLAVISGRDS 63 (162)
T ss_dssp HHHHHTTTCEEEEEESCCC
T ss_pred HHHHHHCCCEEEEEeCCCc
Confidence 3456666766666666654
No 109
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=80.99 E-value=1.1 Score=35.68 Aligned_cols=69 Identities=13% Similarity=0.064 Sum_probs=47.6
Q ss_pred CcHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 64 GFADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
|+...|+++|+.|... .-.+...|.. ..+..+. ..+.+.|++.+.+.+...+++.+++.|++.-++|..
T Consensus 162 ~~~~~l~~~G~~v~~~~~~~~~~~d~~--~~~~~l~-~~~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~~ 231 (392)
T 3lkb_A 162 DARKAARELGLQIVDVQEVGSGNLDNT--ALLKRFE-QAGVEYVVHQNVAGPVANILKDAKRLGLKMRHLGAH 231 (392)
T ss_dssp HHHHHHHHHTCEEEEEEECCTTCCCCH--HHHHHHH-HTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEEECG
T ss_pred HHHHHHHHcCCeEEEEEeeCCCCcCHH--HHHHHHH-hcCCCEEEEecCcchHHHHHHHHHHcCCCceEEEec
Confidence 4566788888866432 2222333321 2233333 578999999999999999999999999998888754
No 110
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=80.73 E-value=8 Score=28.05 Aligned_cols=75 Identities=11% Similarity=-0.038 Sum_probs=38.4
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHH-HcCC---eEEEEcCC-CchH
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEAT-LRWL---KMVVVGDM-SDGA 139 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Ar-er~l---~tVVVGd~-~~~~ 139 (157)
+-.+|++.|+.+-.++..|... + .. .+...|++.++ +...+=...++.+. +.|+ .++.|||+ +|-.
T Consensus 43 ~l~~L~~~G~~~~i~Tg~~~~~---~-~~---~~~~lgl~~~~--~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 113 (180)
T 1k1e_A 43 GIKMLMDADIQVAVLSGRDSPI---L-RR---RIADLGIKLFF--LGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLP 113 (180)
T ss_dssp HHHHHHHTTCEEEEEESCCCHH---H-HH---HHHHHTCCEEE--ESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred HHHHHHHCCCeEEEEeCCCcHH---H-HH---HHHHcCCceee--cCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 3457888899888888887621 1 11 22223454433 22222233433333 3353 56777777 4444
Q ss_pred HHhhhhccc
Q 045172 140 LKRIANAFF 148 (157)
Q Consensus 140 L~r~AD~~f 148 (157)
..+.|++.+
T Consensus 114 ~~~~ag~~~ 122 (180)
T 1k1e_A 114 AFAACGTSF 122 (180)
T ss_dssp HHHHSSEEE
T ss_pred HHHHcCCeE
Confidence 455555444
No 111
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=80.30 E-value=6.5 Score=28.21 Aligned_cols=38 Identities=21% Similarity=0.215 Sum_probs=26.6
Q ss_pred HHHHHHHHhhcCcccC-CCcHHHHHhhceEEEEecCCCc
Q 045172 47 EKNKMAASAILTPKVG-YGFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 47 ~kY~~Aar~~l~pkvg-ygla~eLrRAGv~V~~V~dkpq 84 (157)
+.|.....+...|--| ..+-..|+..|+.+-.++..|.
T Consensus 73 ~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~ 111 (216)
T 3kbb_A 73 EEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQ 111 (216)
T ss_dssp HHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCH
T ss_pred HHHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcH
Confidence 3444455555566555 5667788999999999988876
No 112
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=80.08 E-value=6.8 Score=31.26 Aligned_cols=66 Identities=17% Similarity=0.199 Sum_probs=42.3
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHH-HHHHHHH-cCCeEEEEcCC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVE-VFQEATL-RWLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~-~lr~Are-r~l~tVVVGd~ 135 (157)
|+...++..|+.+..+....+ +|. ...+..++ .+++|.|+++|.. +.+ +...+.+ .++.+|+|+..
T Consensus 28 Gi~~~~~~~g~~~~~~~~~~~-~~~--~~~l~~l~-~~~~dgIi~~~~~--~~~~~~~~a~~~p~~p~v~id~~ 95 (318)
T 2fqx_A 28 GISRFAQENNAKCKYVTASTD-AEY--VPSLSAFA-DENMGLVVACGSF--LVEAVIETSARFPKQKFLVIDAV 95 (318)
T ss_dssp HHHHHHHHTTCEEEEEECCSG-GGH--HHHHHHHH-HTTCSEEEEESTT--THHHHHHHHHHCTTSCEEEESSC
T ss_pred HHHHHHHHhCCeEEEEeCCCH-HHH--HHHHHHHH-HcCCCEEEECChh--HHHHHHHHHHHCCCCEEEEEcCc
Confidence 566677888998887654332 443 23333444 7899999999743 233 4444544 38999999864
No 113
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=79.86 E-value=1.4 Score=35.01 Aligned_cols=62 Identities=10% Similarity=0.040 Sum_probs=44.3
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+.+....... . .......+.+..+++|.|++.+. +..+.+.|..+|+++..
T Consensus 84 ~gi~~~a~~~g~~~~~~~~~~--~--~~~~~~~~~l~~~~vdGiIi~~~-------~~~~~~~~iPvV~~~~~ 145 (333)
T 3jvd_A 84 QTIQQDLKAAGYQMLVAEANS--V--QAQDVVMESLISIQAAGIIHVPV-------VGSIAPEGIPMVQLTRG 145 (333)
T ss_dssp HHHHHHHHHHTCEEEEEECCS--H--HHHHHHHHHHHHHTCSEEEECCC-------TTCCC-CCSCEEEECC-
T ss_pred HHHHHHHHHCCCEEEEECCCC--h--HHHHHHHHHHHhCCCCEEEEcch-------HHHHhhCCCCEEEECcc
Confidence 577889999999998865433 1 22234445555789999999887 66678889999999875
No 114
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=79.80 E-value=0.93 Score=35.73 Aligned_cols=69 Identities=10% Similarity=0.041 Sum_probs=44.6
Q ss_pred CcHHHHHhhceEEEE-ecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 64 GFADELKRAWFWVRM-VLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~~-V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
|+...|+++|+.|.. ..-.+...|.. ..+..+. ..+.+.|++.+++.+...+++.+++.|++.-+||-.
T Consensus 160 ~~~~~~~~~G~~v~~~~~~~~~~~d~~--~~~~~l~-~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~i~~~ 229 (364)
T 3lop_A 160 GVERTLKAHALAITAMASYPRNTANVG--PAVDKLL-AADVQAIFLGATAEPAAQFVRQYRARGGEAQLLGLS 229 (364)
T ss_dssp HHHHHHHTTTCCCSEEEEECTTSCCCH--HHHHHHH-HSCCSEEEEESCHHHHHHHHHHHHHTTCCCEEEECT
T ss_pred HHHHHHHHcCCcEEEEEEecCCCccHH--HHHHHHH-hCCCCEEEEecCcHHHHHHHHHHHHcCCCCeEEEec
Confidence 345566677765421 11122233321 2223333 578999999999999999999999999987777743
No 115
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=79.74 E-value=6.3 Score=27.60 Aligned_cols=77 Identities=19% Similarity=0.109 Sum_probs=45.0
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcc----eEEEEcC--------------CcchHHHHHHHHHc
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFG----CLVVVSD--------------DSDFVEVFQEATLR 125 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~----clvLVSD--------------DsDF~~~lr~Arer 125 (157)
.+-..|+..|+.+-.++.+|.. .. ..+.+.+ +++ ..+.+.+ -+.-..+...+.+-
T Consensus 83 ~~l~~l~~~g~~~~i~T~~~~~---~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~l 155 (211)
T 1l7m_A 83 ETIKELKNRGYVVAVVSGGFDI---AV-NKIKEKL---GLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIE 155 (211)
T ss_dssp HHHHHHHHTTEEEEEEEEEEHH---HH-HHHHHHH---TCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEcCCcHH---HH-HHHHHHc---CCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHHc
Confidence 3456778899999999887752 11 2222222 333 2222222 12334566667777
Q ss_pred CCe---EEEEcCC-CchHHHhhhhcc
Q 045172 126 WLK---MVVVGDM-SDGALKRIANAF 147 (157)
Q Consensus 126 ~l~---tVVVGd~-~~~~L~r~AD~~ 147 (157)
|+. +++|||+ +|-...+.|...
T Consensus 156 gi~~~~~~~iGD~~~Di~~~~~ag~~ 181 (211)
T 1l7m_A 156 GINLEDTVAVGDGANDISMFKKAGLK 181 (211)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHCSEE
T ss_pred CCCHHHEEEEecChhHHHHHHHCCCE
Confidence 775 9999999 555555666553
No 116
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=79.68 E-value=9.4 Score=25.34 Aligned_cols=62 Identities=13% Similarity=0.154 Sum_probs=40.0
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc--CCeEEEEcCCC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR--WLKMVVVGDMS 136 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer--~l~tVVVGd~~ 136 (157)
.|...|...|+.|.++.+..+ | .+.+.....|+++ . .+.+-.++++..++. ....|++++..
T Consensus 33 ~l~~~L~~~g~~v~~~~~~~~----a-----l~~l~~~~~dlvi-~-~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 96 (137)
T 2pln_A 33 EIEKGLNVKGFMADVTESLED----G-----EYLMDIRNYDLVM-V-SDKNALSFVSRIKEKHSSIVVLVSSDNP 96 (137)
T ss_dssp HHHHHHHHTTCEEEEESCHHH----H-----HHHHHHSCCSEEE-E-CSTTHHHHHHHHHHHSTTSEEEEEESSC
T ss_pred HHHHHHHHcCcEEEEeCCHHH----H-----HHHHHcCCCCEEE-E-cCccHHHHHHHHHhcCCCccEEEEeCCC
Confidence 456677788998887655332 2 2233345678777 4 344445777777775 78888888764
No 117
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=79.66 E-value=2.8 Score=34.35 Aligned_cols=75 Identities=16% Similarity=0.107 Sum_probs=38.0
Q ss_pred HhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcc
Q 045172 70 KRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDMSDGALKRIANAF 147 (157)
Q Consensus 70 rRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~ 147 (157)
++.++.+++.+.+-++.. +...+...+...|+++.+..+... +..++.+.+-+.+...||+..+ |+.+...++.-
T Consensus 25 ~~i~vI~NP~sg~~~~~~--~~~~i~~~L~~~g~~~~~~~t~~~~~a~~~~~~~~~~~~d~vvv~GG-DGTv~~v~~~l 100 (337)
T 2qv7_A 25 KRARIIYNPTSGKEQFKR--ELPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAAGG-DGTLNEVVNGI 100 (337)
T ss_dssp EEEEEEECTTSTTSCHHH--HHHHHHHHHHHTTEEEEEEECCSTTHHHHHHHHHTTTTCSEEEEEEC-HHHHHHHHHHH
T ss_pred ceEEEEECCCCCCCchHH--HHHHHHHHHHHcCCeEEEEEecCcchHHHHHHHHhhcCCCEEEEEcC-chHHHHHHHHH
Confidence 455566655444333222 235555555556666666655543 4444555554455555555444 45555555543
No 118
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=79.61 E-value=2.3 Score=35.49 Aligned_cols=46 Identities=17% Similarity=0.083 Sum_probs=37.6
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccc
Q 045172 104 GCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 104 ~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
|++|.+|-. .|-..+++.|+++|.+||.|-+..+..|.+.||.-|.
T Consensus 99 dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 147 (367)
T 2poc_A 99 DTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVH 147 (367)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTSHHHHHSSEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEE
Confidence 567777753 4567788999999999999999867899999998763
No 119
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=79.40 E-value=11 Score=27.30 Aligned_cols=78 Identities=14% Similarity=-0.046 Sum_probs=45.1
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEE---EEcCC----------cch----HH-HHHHHHHc
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLV---VVSDD----------SDF----VE-VFQEATLR 125 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clv---LVSDD----------sDF----~~-~lr~Arer 125 (157)
.+-..|+..|+.+-.|+..|. ...+.+.+ ..|++.++ +.++| ..+ .. +.+.+.+.
T Consensus 99 ~~l~~l~~~g~~~~ivS~~~~----~~~~~~~~---~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~ 171 (232)
T 3fvv_A 99 DVVRGHLAAGDLCALVTATNS----FVTAPIAR---AFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGM 171 (232)
T ss_dssp HHHHHHHHTTCEEEEEESSCH----HHHHHHHH---HTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEEeCCCH----HHHHHHHH---HcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHHc
Confidence 455667899999999999886 22233332 34554221 22222 122 12 33444556
Q ss_pred C---C---eEEEEcCC-CchHHHhhhhccc
Q 045172 126 W---L---KMVVVGDM-SDGALKRIANAFF 148 (157)
Q Consensus 126 ~---l---~tVVVGd~-~~~~L~r~AD~~f 148 (157)
| + .+++|||+ +|-...+.|+..+
T Consensus 172 ~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~ 201 (232)
T 3fvv_A 172 GLALGDFAESYFYSDSVNDVPLLEAVTRPI 201 (232)
T ss_dssp TCCGGGSSEEEEEECCGGGHHHHHHSSEEE
T ss_pred CCCcCchhheEEEeCCHhhHHHHHhCCCeE
Confidence 6 3 59999999 6666667776554
No 120
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=79.10 E-value=2.5 Score=34.83 Aligned_cols=45 Identities=11% Similarity=0.026 Sum_probs=37.3
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhccc
Q 045172 104 GCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFF 148 (157)
Q Consensus 104 ~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~f 148 (157)
+++|.+|-. .|-...++.|+++|.+|+.|-+..+..|.+.||.-|
T Consensus 76 dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l 123 (329)
T 3eua_A 76 SLVILCSHSGNTPETVKAAAFARGKGALTIAMTFKPESPLAQEAQYVA 123 (329)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHHSSEEE
T ss_pred cEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEE
Confidence 566666654 366778899999999999999887789999999876
No 121
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=79.09 E-value=4 Score=34.71 Aligned_cols=70 Identities=13% Similarity=0.052 Sum_probs=47.4
Q ss_pred cHHHHHhhceEEEEe---cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEc-CCC
Q 045172 65 FADELKRAWFWVRMV---LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVG-DMS 136 (157)
Q Consensus 65 la~eLrRAGv~V~~V---~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVG-d~~ 136 (157)
+..++++.|+-|-.+ +..+...|. ...+...+..-+.+.+++.++..+...+++.|++.|+..+.|| +.+
T Consensus 205 ~~~~~~~~Gi~v~~~~~i~~~~~~~d~--~~~l~~~i~~s~a~vIi~~~~~~~~~~l~~~~~~~g~~~~wI~s~~w 278 (479)
T 3sm9_A 205 FEQEARLRNISIATAEKVGRSNIRKSY--DSVIRELLQKPNARVVVLFMRSDDSRELIAAASRANASFTWVASDGW 278 (479)
T ss_dssp HHHHHHTTTCEEEEEEEECC--CHHHH--HHHHHHHHTCTTCCEEEEECCHHHHHHHHHHHHHTTCCCEEEECTTT
T ss_pred HHHHHHHCCceEEEEEEcCCCCChHHH--HHHHHHHHhcCCCeEEEEEcChHHHHHHHHHHHHhCCEEEEEEechh
Confidence 346788889776543 433333343 3333344545689999999999999999999999999655554 444
No 122
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=78.98 E-value=7.6 Score=29.63 Aligned_cols=64 Identities=17% Similarity=0.028 Sum_probs=43.5
Q ss_pred cHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCC----cchHHHHHHHHHcCC---eEEEEcCC
Q 045172 65 FADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD----SDFVEVFQEATLRWL---KMVVVGDM 135 (157)
Q Consensus 65 la~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD----sDF~~~lr~Arer~l---~tVVVGd~ 135 (157)
++..|+.+|+.|... .+-|. . .+.+.+...+.+.++|-+-. ..+..+++..|++|+ -.|+||..
T Consensus 108 va~~l~~~G~~v~~LG~~vp~---~----~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 108 VAMMLESGGFTVYNLGVDIEP---G----KFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp HHHHHHHTTCEEEECCSSBCH---H----HHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred HHHHHHHCCCEEEECCCCCCH---H----HHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 467899999999975 33333 2 33344445688888886643 357788889999885 35677765
No 123
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=78.63 E-value=1.5 Score=34.23 Aligned_cols=69 Identities=12% Similarity=0.034 Sum_probs=45.2
Q ss_pred CcHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 64 GFADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
|+..+|+.+|..|... .-.+...|.. ..+..+. ..+.+.+++.+|..+...+++.+++.|++.-+||-.
T Consensus 158 ~~~~~l~~~g~~v~~~~~~~~~~~~~~--~~~~~l~-~~~~d~i~~~~~~~~a~~~~~~~~~~g~~~p~~~~~ 227 (358)
T 3hut_A 158 AFRKAFELRGGAVVVNEEVPPGNRRFD--DVIDEIE-DEAPQAIYLAMAYEDAAPFLRALRARGSALPVYGSS 227 (358)
T ss_dssp HHHHHHHHTTCEEEEEEEECTTCCCCH--HHHHHHH-HHCCSEEEEESCHHHHHHHHHHHHHTTCCCCEEECG
T ss_pred HHHHHHHHcCCEEEEEEecCCCCccHH--HHHHHHH-hcCCCEEEEccCchHHHHHHHHHHHcCCCCcEEecC
Confidence 4556778888765432 1112222221 1223333 468899998888889999999999999998787753
No 124
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=78.61 E-value=13 Score=27.14 Aligned_cols=83 Identities=13% Similarity=-0.130 Sum_probs=44.3
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccC--cceEEEEcCCcch-----HHHHHHHHHcCC----eEEEE
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRR--FGCLVVVSDDSDF-----VEVFQEATLRWL----KMVVV 132 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~--v~clvLVSDDsDF-----~~~lr~Arer~l----~tVVV 132 (157)
.+-.+|+..|+.+-.++..|... .....+.+.-.+ ++. +..|++... ..+...+..-|+ .+++|
T Consensus 118 ~~l~~l~~~g~~~~i~tn~~~~~----~~~~l~~~~~~~~~~~~-~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~v 192 (277)
T 3iru_A 118 EVFDKLIAQGIKVGGNTGYGPGM----MAPALIAAKEQGYTPAS-TVFATDVVRGRPFPDMALKVALELEVGHVNGCIKV 192 (277)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHH----HHHHHHHHHHTTCCCSE-EECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEE
T ss_pred HHHHHHHHcCCeEEEEeCCchHH----HHHHHHhcCcccCCCce-EecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEE
Confidence 34567888999999999888622 122222221112 343 333443322 223333444454 46999
Q ss_pred cCC-CchHHHhhhh---cccchh
Q 045172 133 GDM-SDGALKRIAN---AFFSWS 151 (157)
Q Consensus 133 Gd~-~~~~L~r~AD---~~fsW~ 151 (157)
||+ +|-.-.+.|. +++.|.
T Consensus 193 GD~~~Di~~a~~aG~~~v~v~~g 215 (277)
T 3iru_A 193 DDTLPGIEEGLRAGMWTVGVSCS 215 (277)
T ss_dssp ESSHHHHHHHHHTTCEEEEECSS
T ss_pred cCCHHHHHHHHHCCCeEEEEecC
Confidence 999 5444555555 345554
No 125
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=78.42 E-value=6.1 Score=32.11 Aligned_cols=65 Identities=8% Similarity=0.086 Sum_probs=44.9
Q ss_pred HHHHhhceEEEEecCCC--ccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeE----EEEcC
Q 045172 67 DELKRAWFWVRMVLVKP--QDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKM----VVVGD 134 (157)
Q Consensus 67 ~eLrRAGv~V~~V~dkp--qAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~t----VVVGd 134 (157)
.++.+.|..|-...--| .+.| ....+..+. ..+.+.|++.+...+...+++.|++.|+.. .++++
T Consensus 151 ~~~~~~g~~v~~~~~~~~~~~~d--~~~~l~~ik-~~~~~vii~~~~~~~~~~i~~qa~~~g~~~~~~~~i~~~ 221 (389)
T 3o21_A 151 EAAVQNNWQVTARSVGNIKDVQE--FRRIIEEMD-RRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN 221 (389)
T ss_dssp HHHHHTTCEEEEEECTTCCCTHH--HHHHHHHHH-TTTCCEEEEESCHHHHHHHHHHHHHHCSCSTTCEEEECC
T ss_pred HHhhcCCCeEEEEEecCCCCcHH--HHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHcCcccCCeEEEEcc
Confidence 45677787766543322 2234 334444444 578999999999999999999999999863 45555
No 126
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=78.04 E-value=2 Score=33.10 Aligned_cols=68 Identities=7% Similarity=-0.044 Sum_probs=43.9
Q ss_pred CcHHHHHhhceEEEE-ecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcC
Q 045172 64 GFADELKRAWFWVRM-VLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGD 134 (157)
Q Consensus 64 gla~eLrRAGv~V~~-V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd 134 (157)
|+...|+.+|..|-. ..-.+...|.. ..+..+. ..+.+.|++.+.|.+...+++.+++.|++.-+||-
T Consensus 154 ~~~~~l~~~g~~v~~~~~~~~~~~~~~--~~~~~l~-~~~~dav~~~~~~~~a~~~~~~~~~~g~~~p~i~~ 222 (362)
T 3snr_A 154 DLKKQGEAMGLKIVGEERFARPDTSVA--GQALKLV-AANPDAILVGASGTAAALPQTTLRERGYNGLIYQT 222 (362)
T ss_dssp HHHHHHHHTTCEEEEEEEECTTCSCCH--HHHHHHH-HHCCSEEEEECCHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHHcCCEEEEEeecCCCCCCHH--HHHHHHH-hcCCCEEEEecCcchHHHHHHHHHHcCCCccEEec
Confidence 456677888876432 11122222321 1222333 46889999999899999999999999997655554
No 127
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=77.99 E-value=4.8 Score=38.14 Aligned_cols=38 Identities=13% Similarity=-0.017 Sum_probs=31.8
Q ss_pred CcchHHHHHHHHHcCCeEEEEcCC-CchHHHhhhhcccc
Q 045172 112 DSDFVEVFQEATLRWLKMVVVGDM-SDGALKRIANAFFS 149 (157)
Q Consensus 112 DsDF~~~lr~Arer~l~tVVVGd~-~~~~L~r~AD~~fs 149 (157)
..+-..+++..++.|-.+..|||+ +|-..-+.||+.+.
T Consensus 682 P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgia 720 (995)
T 3ar4_A 682 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIA 720 (995)
T ss_dssp SSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEE
Confidence 557888999999999999999999 77666678898775
No 128
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=77.91 E-value=0.36 Score=36.74 Aligned_cols=68 Identities=12% Similarity=0.193 Sum_probs=46.0
Q ss_pred CCcHHHHHhhceEEEEecC--CCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLV--KPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~d--kpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..++.+.|+.+..... .++. ...+.+.+..+++|.+++.+.+.+-..++ .+.+.|..+|++|...
T Consensus 32 ~gi~~~a~~~g~~~~~~~~~~~~~~-----~~~~~~~l~~~~vdgiIi~~~~~~~~~~~-~~~~~~iPvV~~~~~~ 101 (289)
T 3g85_A 32 RGLQSKLAKQNYNYNVVICPYKTDC-----LHLEKGISKENSFDAAIIANISNYDLEYL-NKASLTLPIILFNRLS 101 (289)
T ss_dssp HHHHHHHHHTTTCSEEEEEEECTTC-----GGGCGGGSTTTCCSEEEESSCCHHHHHHH-HHCCCSSCEEEESCCC
T ss_pred HHHHHHHHHcCCeEEEEecCCCchh-----HHHHHHHHhccCCCEEEEecCCcccHHHH-HhccCCCCEEEECCCC
Confidence 5677888899998776532 2221 12344555578999999998765543444 4457899999998763
No 129
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=77.84 E-value=4 Score=39.02 Aligned_cols=39 Identities=13% Similarity=0.084 Sum_probs=31.9
Q ss_pred CCcchHHHHHHHHHcCCeEEEEcCC-CchHHHhhhhcccc
Q 045172 111 DDSDFVEVFQEATLRWLKMVVVGDM-SDGALKRIANAFFS 149 (157)
Q Consensus 111 DDsDF~~~lr~Arer~l~tVVVGd~-~~~~L~r~AD~~fs 149 (157)
...+-..+++..++.|-.+..|||+ +|-..-+.||+.+.
T Consensus 699 ~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIA 738 (1028)
T 2zxe_A 699 SPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 738 (1028)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEE
Confidence 3456778889999999999999999 77666778898874
No 130
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=77.81 E-value=2.6 Score=32.89 Aligned_cols=68 Identities=13% Similarity=0.083 Sum_probs=44.7
Q ss_pred CcHHHHHhhceEEEE-ecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcC
Q 045172 64 GFADELKRAWFWVRM-VLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGD 134 (157)
Q Consensus 64 gla~eLrRAGv~V~~-V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd 134 (157)
|+...|+++|..|-. ..-.+...|.. ..+..+. ..+.+.|++.+++.+...+++.+++.|++.-++|-
T Consensus 178 ~~~~~l~~~g~~v~~~~~~~~~~~d~~--~~~~~~~-~~~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 246 (386)
T 3sg0_A 178 VLAAAAPKLGFELTTHEVYARSDASVT--GQVLKII-ATKPDAVFIASAGTPAVLPQKALRERGFKGAIYQT 246 (386)
T ss_dssp HHHHHHHHHTCEECCCEEECTTCSCCH--HHHHHHH-HTCCSEEEEECCSGGGHHHHHHHHHTTCCSEEECC
T ss_pred HHHHHHHHcCCEEEEEEeeCCCCCcHH--HHHHHHH-hcCCCEEEEecCcchHHHHHHHHHHcCCCCcEEec
Confidence 456677888876531 11112222321 1223333 56899999999989999999999999998666653
No 131
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=77.79 E-value=2 Score=34.34 Aligned_cols=69 Identities=7% Similarity=-0.109 Sum_probs=47.4
Q ss_pred CcHHHHHhhceEEEEe-cCCCccHHHHHHHHHHH--HhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 64 GFADELKRAWFWVRMV-LVKPQDADVLLRNYMVA--MVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~--~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
++..+|+++|+.|-.. .-.+...|.. ..+.. +. ..+.+.|++.++..+...+++.+++.|++.-++|..
T Consensus 161 ~~~~~l~~~G~~v~~~~~~~~~~~d~~--~~~~~~~l~-~~~~dav~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 232 (391)
T 3eaf_A 161 AIKKAAPSLGLQVVGDYDLPLRATEAD--AERIAREML-AADPDYVWCGNTISSCSLLGRAMAKVGLDAFLLTNV 232 (391)
T ss_dssp HHHHHTGGGTEEEEEEEECCTTCCHHH--HHHHHHHHH-TTCCSEEEECSCHHHHHHHHHHHHHHTCCCEEEECG
T ss_pred HHHHHHHHcCCceeeeeccCCCCcCHH--HHHHHHHHH-HcCCCEEEEecCcHHHHHHHHHHHHCCCCceEEEec
Confidence 3456677888766432 2233344432 22333 34 578999999998899999999999999988777754
No 132
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=77.47 E-value=3.8 Score=32.10 Aligned_cols=66 Identities=9% Similarity=0.004 Sum_probs=44.7
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.|+..++...|+.+....... |..-...+.+.+..+++|.|+ .+.+.+. ..+.+.|..+|+++...
T Consensus 80 ~gi~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgiI-~~~~~~~----~~l~~~~iPvV~~~~~~ 145 (330)
T 3ctp_A 80 SVIEEYAKNKGYTLFLCNTDD---DKEKEKTYLEVLQSHRVAGII-ASRSQCE----DEYANIDIPVVAFENHI 145 (330)
T ss_dssp HHHHHHHHHTTCEEEEEECTT---CHHHHHHHHHHHHHTTCSEEE-EETCCCS----GGGTTCCSCEEEESSCC
T ss_pred HHHHHHHHHCCCEEEEEeCCC---ChHHHHHHHHHHHhCCCCEEE-ECCCCCH----HHHHhcCCCEEEEeccC
Confidence 477788899999988764432 233334445555478999999 8765543 23457899999998753
No 133
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=77.33 E-value=2.2 Score=35.80 Aligned_cols=45 Identities=7% Similarity=0.155 Sum_probs=36.9
Q ss_pred ceEEEEcCC---cchHHHHHHHHHc-CCeEEEEcCCCchHHHhhhhccc
Q 045172 104 GCLVVVSDD---SDFVEVFQEATLR-WLKMVVVGDMSDGALKRIANAFF 148 (157)
Q Consensus 104 ~clvLVSDD---sDF~~~lr~Arer-~l~tVVVGd~~~~~L~r~AD~~f 148 (157)
|+++.+|-. .|-..+++.|+++ |.++|.|-+..+..|.+.||..+
T Consensus 99 dlvI~iS~SG~T~e~l~a~~~ak~~~Ga~vIaIT~~~~S~La~~ad~~l 147 (373)
T 2aml_A 99 DLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFADITL 147 (373)
T ss_dssp CEEEEECSSSCBHHHHHHHHHHHHHCCCCEEEEESCTTSGGGGGCSEEE
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhCCCcEEEEECCCCChHHHhcCcce
Confidence 666777743 4567788999999 99999999986789999999876
No 134
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=77.05 E-value=1.7 Score=33.90 Aligned_cols=62 Identities=11% Similarity=0.030 Sum_probs=40.6
Q ss_pred CcHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCe
Q 045172 64 GFADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLK 128 (157)
Q Consensus 64 gla~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~ 128 (157)
++...|++.|..|-.. .-.+...|.. ..+..+. ..+.+.|++.+.+.+...+++.+++.|++
T Consensus 158 ~~~~~l~~~g~~v~~~~~~~~~~~d~~--~~~~~l~-~~~~d~v~~~~~~~~a~~~~~~~~~~g~~ 220 (368)
T 4eyg_A 158 FFKERFTAGGGEIVEEIKVPLANPDFA--PFLQRMK-DAKPDAMFVFVPAGQGGNFMKQFAERGLD 220 (368)
T ss_dssp HHHHHHHHTTCEEEEEEEECSSSCCCH--HHHHHHH-HHCCSEEEEECCTTCHHHHHHHHHHTTGG
T ss_pred HHHHHHHHcCCEEEEEEeCCCCCCcHH--HHHHHHH-hcCCCEEEEeccchHHHHHHHHHHHcCCC
Confidence 3455677788765322 1122233322 2233333 46889999988888999999999999998
No 135
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=76.47 E-value=4.8 Score=34.61 Aligned_cols=67 Identities=12% Similarity=0.050 Sum_probs=46.8
Q ss_pred HHHHHhhceEEE---EecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcC
Q 045172 66 ADELKRAWFWVR---MVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGD 134 (157)
Q Consensus 66 a~eLrRAGv~V~---~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd 134 (157)
..++.+.|+-|- .++..+...| ....+..++..-+.+.|++.++..+...+++.|++.|++.+.||-
T Consensus 207 ~~~~~~~gi~v~~~~~~~~~~~~~~--~~~~l~~i~~~s~a~vIi~~~~~~~~~~~~~~~~~~g~~~~~i~s 276 (555)
T 2e4u_A 207 EQEARLRNICIATAEKVGRSNIRKS--YDSVIRELLQKPNARVVVLFMRSDDSRELIAAANRVNASFTWVAS 276 (555)
T ss_dssp HHHHHTTTCEEEEEEEECTTCCHHH--HHHHHHHHHTCTTCCEEEEECCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHCCccEEEEEEeCCCCChHH--HHHHHHHHhccCCCCEEEEEcCHHHHHHHHHHHHHhcCCeEEEEe
Confidence 456778898664 3443334445 334444444335899999999999999999999999987666653
No 136
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=76.34 E-value=6.1 Score=30.03 Aligned_cols=64 Identities=9% Similarity=-0.093 Sum_probs=45.6
Q ss_pred HHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEE
Q 045172 66 ADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMV 130 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tV 130 (157)
...|+..|+.+-.+..-++.. ..-.+.+.+.+...|++.+++.+....|..+...|.+.|++..
T Consensus 69 ~~~l~~~gl~i~~~~~~~~~~-~~~~~~~i~~A~~lGa~~v~~~~~~~~~~~l~~~a~~~gv~l~ 132 (262)
T 3p6l_A 69 KELAASKGIKIVGTGVYVAEK-SSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKIS 132 (262)
T ss_dssp HHHHHHTTCEEEEEEEECCSS-TTHHHHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEEE
T ss_pred HHHHHHcCCeEEEEeccCCcc-HHHHHHHHHHHHHcCCCEEEecCCHHHHHHHHHHHHHhCCEEE
Confidence 456777888877663323222 2234556666668899999999888889999999999998644
No 137
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=75.92 E-value=3 Score=34.81 Aligned_cols=48 Identities=13% Similarity=0.195 Sum_probs=38.0
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhccc--chh
Q 045172 104 GCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFF--SWS 151 (157)
Q Consensus 104 ~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~f--sW~ 151 (157)
+++|.+|-. .|-...++.|+++|.+|+.|-+..+..|.+.||.-+ ++.
T Consensus 91 dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g 143 (347)
T 3fkj_A 91 SVVILASQQGNTAETVAAARVAREKGAATIGLVYQPDTPLCEYSDYIIEYQWA 143 (347)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHTCSEEEECBCC
T ss_pred CEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCChHHhhcCeEEEeccC
Confidence 556666643 366778899999999999999887789999999876 554
No 138
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=75.84 E-value=3.1 Score=34.70 Aligned_cols=47 Identities=13% Similarity=0.115 Sum_probs=38.2
Q ss_pred cceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccc
Q 045172 103 FGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 103 v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
=+++|.+|-. .|-...++.|+++|.+|+.|-+..+..|.+.||..+.
T Consensus 83 ~dlvI~iS~SG~T~e~l~a~~~ak~~ga~~iaIT~~~~S~La~~aD~~l~ 132 (352)
T 3g68_A 83 NTLVVGVSQGGSSYSTYNAMKLAEDKGCKIASMAGCKNALIDEISDYILT 132 (352)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTCGGGGGCSEECC
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCChHHHhCCEEEE
Confidence 4567777754 4667788999999999999998767899999998774
No 139
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=75.83 E-value=2.2 Score=32.32 Aligned_cols=60 Identities=10% Similarity=-0.021 Sum_probs=42.3
Q ss_pred CCcHHHHHhhceEEEEecCC--CccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVK--PQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dk--pqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++.+.|+.+...... |+... ..++|.|++.+.+.+ ...++.+.+.|..+|+++..
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~~~~~------------~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 89 (277)
T 3cs3_A 28 EGIKKGLALFDYEMIVCSGKKSHLFIP------------EKMVDGAIILDWTFP-TKEIEKFAERGHSIVVLDRT 89 (277)
T ss_dssp HHHHHHHHTTTCEEEEEESTTTTTCCC------------TTTCSEEEEECTTSC-HHHHHHHHHTTCEEEESSSC
T ss_pred HHHHHHHHHCCCeEEEEeCCCCHHHHh------------hccccEEEEecCCCC-HHHHHHHHhcCCCEEEEecC
Confidence 46778888899988766432 22110 018999999876655 36778888899999999865
No 140
>3saj_A Glutamate receptor 1; rossman fold, ION channel, membrane, transport protein; HET: NAG BMA MAN; 2.50A {Rattus norvegicus}
Probab=75.76 E-value=3.7 Score=33.00 Aligned_cols=65 Identities=11% Similarity=0.112 Sum_probs=45.3
Q ss_pred HHHHhhceEEEEecCC-CccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCe----EEEEcC
Q 045172 67 DELKRAWFWVRMVLVK-PQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLK----MVVVGD 134 (157)
Q Consensus 67 ~eLrRAGv~V~~V~dk-pqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~----tVVVGd 134 (157)
.+++..|..|-...-- +...| ....+..+. ..+.+.|++.+...+...+++.|++.|+. +.++++
T Consensus 149 ~~~~~~g~~v~~~~~~~~~~~d--~~~~l~~ik-~~~~~vii~~~~~~~~~~~~~qa~~~g~~~~~~~~i~~~ 218 (384)
T 3saj_A 149 DTAAEKNWQVTAVNILTTTEEG--YRMLFQDLE-KKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILAN 218 (384)
T ss_dssp HHHHHHTCEEEEEEGGGCCHHH--HHHTTTTCC-SCSEEEEEEECCGGGHHHHHHHHHHTCCTTCEEEEEESS
T ss_pred HHhhhcCceEEEEEeccCCchh--HHHHHHHHh-ccCCcEEEEEcCHHHHHHHHHHHHHcCCCCCCcEEEEEC
Confidence 4567788877654421 23333 334444433 56889999999999999999999999986 346665
No 141
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=75.61 E-value=0.95 Score=36.12 Aligned_cols=77 Identities=13% Similarity=0.088 Sum_probs=44.2
Q ss_pred CCcHHHHHhhceEEEEecC---CCccHHHHHHHHHHHHhhc-cCcceEEEEcCCc--chHHHHHHH---HHcCCeEEEEc
Q 045172 63 YGFADELKRAWFWVRMVLV---KPQDADVLLRNYMVAMVDK-RRFGCLVVVSDDS--DFVEVFQEA---TLRWLKMVVVG 133 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~d---kpqAAD~AL~~~~~~~~~~-r~v~clvLVSDDs--DF~~~lr~A---rer~l~tVVVG 133 (157)
..|+..|+.+|+.|..++- .|...+. ..+.+.+.. ..+|++++.|... .|..++... ...+++.++||
T Consensus 170 ~~L~~~L~~~G~~v~~~~~Y~~~~~~~~~---~~~~~~l~~~~~~d~v~ftS~~~v~~f~~~~~~~~~~~l~~~~i~aIG 246 (286)
T 1jr2_A 170 EILPKALKDKGIAMESITVYQTVAHPGIQ---GNLNSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIG 246 (286)
T ss_dssp CCHHHHHHTTTCCEEEEECEEEEECTTHH---HHHHHHHHHHCSCSEEEESSHHHHHHHHHHHHHHHGGGGGGSEEEESS
T ss_pred HHHHHHHHHCCCeeEEEEEEEEeeCCCcH---HHHHHHHHhCCCCCEEEEEChHHHHHHHHHHhhhccccccCCEEEEEC
Confidence 5699999999998876632 2221111 112222322 5688877777654 344444331 12567788888
Q ss_pred CCCchHHHh
Q 045172 134 DMSDGALKR 142 (157)
Q Consensus 134 d~~~~~L~r 142 (157)
..+-.+|..
T Consensus 247 ~~Ta~~l~~ 255 (286)
T 1jr2_A 247 PTTARALAA 255 (286)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 876555543
No 142
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=75.55 E-value=8.8 Score=27.28 Aligned_cols=21 Identities=5% Similarity=-0.067 Sum_probs=16.2
Q ss_pred CcHHHHHhhceEEEEecCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq 84 (157)
.+-.+|+..|+.+-.++..+.
T Consensus 98 ~~l~~l~~~g~~~~i~s~~~~ 118 (233)
T 3s6j_A 98 ELLETLDKENLKWCIATSGGI 118 (233)
T ss_dssp HHHHHHHHTTCCEEEECSSCH
T ss_pred HHHHHHHHCCCeEEEEeCCch
Confidence 445678888999988888765
No 143
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=74.84 E-value=3.4 Score=34.90 Aligned_cols=48 Identities=10% Similarity=0.084 Sum_probs=39.0
Q ss_pred CcceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccc
Q 045172 102 RFGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 102 ~v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
.=+++|.+|-. .|-...++.|+++|.+|+.|-+..+..|.+.||.-+.
T Consensus 97 ~~dlvI~iS~SGeT~e~l~a~~~ak~~Ga~~IaIT~~~~S~La~~aD~~l~ 147 (366)
T 3knz_A 97 GKALVVGISQGGGSLSTLAAMERARNVGHITASMAGVAPATIDRAADYILT 147 (366)
T ss_dssp CSEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSSSCGGGGGCSEECC
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHcCCCEEEEECCCCChhhhhcCEEEe
Confidence 44667777754 4677889999999999999998867899999998773
No 144
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=74.77 E-value=5.8 Score=28.87 Aligned_cols=21 Identities=14% Similarity=0.077 Sum_probs=16.0
Q ss_pred CcHHHHHhhceEEEEecCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq 84 (157)
.+-.+|+..|+.+-.++..+.
T Consensus 117 ~~l~~l~~~g~~~~i~s~~~~ 137 (240)
T 3sd7_A 117 EILEMLYKNGKILLVATSKPT 137 (240)
T ss_dssp HHHHHHHHTTCEEEEEEEEEH
T ss_pred HHHHHHHHCCCeEEEEeCCcH
Confidence 345678888998888887654
No 145
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porph structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=74.61 E-value=2.4 Score=32.85 Aligned_cols=76 Identities=16% Similarity=0.159 Sum_probs=46.4
Q ss_pred CcHHHHHhhceEEEEecC---CCccHHHHHHHHHHHHhhccCcceEEEEcCCc--chHHHHHHH-----HHc-CCeEEEE
Q 045172 64 GFADELKRAWFWVRMVLV---KPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS--DFVEVFQEA-----TLR-WLKMVVV 132 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~d---kpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs--DF~~~lr~A-----rer-~l~tVVV 132 (157)
.|+..|+.+|+.|..++- .|... ....+.+.+....+|++++-|... .|..++... .-. +.+.++|
T Consensus 145 ~L~~~L~~~G~~v~~~~~Y~~~~~~~---~~~~~~~~l~~~~~d~v~ftS~~~v~~~~~~~~~~~~~~~~l~~~~~~~aI 221 (261)
T 1wcw_A 145 LLENALAERGYRVLPLMPYRHLPDPE---GILRLEEALLRGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALAV 221 (261)
T ss_dssp HHHHHHHHTTEEEEEECSEEEEECHH---HHHHHHHHHHHTCCSEEEECSHHHHHHHHHHCSCHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHCCCEEEEEeeEEEecCCc---cHHHHHHHHHcCCCCEEEEECHHHHHHHHHHHhhccchhHHhhcCCEEEEE
Confidence 488999999999987753 34322 223334445457789888777654 243333211 124 6788899
Q ss_pred cCCCchHHHh
Q 045172 133 GDMSDGALKR 142 (157)
Q Consensus 133 Gd~~~~~L~r 142 (157)
|..+-.++..
T Consensus 222 G~~Ta~~l~~ 231 (261)
T 1wcw_A 222 GRVTADALRE 231 (261)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9886555543
No 146
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=74.47 E-value=8.7 Score=28.00 Aligned_cols=20 Identities=20% Similarity=0.184 Sum_probs=15.3
Q ss_pred cHHHHHhhceEEEEecCCCc
Q 045172 65 FADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpq 84 (157)
+-..|+..|+.+-.++..|.
T Consensus 113 ~l~~l~~~g~~~~i~s~~~~ 132 (240)
T 2no4_A 113 TLEKLKSAGYIVAILSNGND 132 (240)
T ss_dssp HHHHHHHTTCEEEEEESSCH
T ss_pred HHHHHHHCCCEEEEEcCCCH
Confidence 34567888999888888875
No 147
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=74.44 E-value=6.6 Score=32.47 Aligned_cols=49 Identities=22% Similarity=0.270 Sum_probs=37.3
Q ss_pred HhhccCcceEEEEcCCc-----chHHHHHHHHHcCCeEEEEcCCC--------chHHHhhhh
Q 045172 97 MVDKRRFGCLVVVSDDS-----DFVEVFQEATLRWLKMVVVGDMS--------DGALKRIAN 145 (157)
Q Consensus 97 ~~~~r~v~clvLVSDDs-----DF~~~lr~Arer~l~tVVVGd~~--------~~~L~r~AD 145 (157)
||.+.....|+|+||-. |=....+.|++.|++..+||-+. ...|...|+
T Consensus 4 ~~~~~~~k~iillTDG~~~~g~~p~~aa~~a~~~gi~v~tIGig~~~~~~~~~~~~L~~IA~ 65 (242)
T 3rag_A 4 MTREATIRQILVITDGCSNIGPDPVEAARRAHRHGIVVNVIGIVGRGDAGEQGYQEAHSIAD 65 (242)
T ss_dssp HHHHCCEEEEEEEESSCCCSSSCHHHHHHHHHHTTCEEEEEEECCSSSCTTCCCHHHHHHHH
T ss_pred cccCCCccEEEEEccCCCCCCCCHHHHHHHHHHCCCEEEEEEecCCccccchhHHHHHHHHH
Confidence 46667778999999975 56888999999999977777632 156777776
No 148
>3d8t_A Uroporphyrinogen-III synthase; heme biosynthesis, lyase; 1.60A {Thermus thermophilus} PDB: 3d8r_A 3d8s_A 3d8n_A
Probab=74.43 E-value=2.4 Score=33.80 Aligned_cols=75 Identities=19% Similarity=0.193 Sum_probs=46.4
Q ss_pred CcHHHHHhhceEEEEecC---CCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHH--------Hc-CCeEEE
Q 045172 64 GFADELKRAWFWVRMVLV---KPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEAT--------LR-WLKMVV 131 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~d---kpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Ar--------er-~l~tVV 131 (157)
.|+..|+.+|+.|..++- .|... ....+.+.+....+|++++-|... ...++..+. .. +++.++
T Consensus 170 ~L~~~L~~~G~~v~~~~~Y~~~~~~~---~~~~~~~~l~~~~~d~v~FtS~~~-v~~~~~~~~~~~~~~~~l~~~~~i~a 245 (286)
T 3d8t_A 170 LLENALAERGYRVLPLMPYRHLPDPE---GILRLEEAVLRGEVDALAFVAAIQ-VEFLFEGAKDPKALREALNTRVKALA 245 (286)
T ss_dssp HHHHHHHHTTCEEEEECSEEEEECHH---HHHHHHHHHHTTCCSEEEESSHHH-HHHHHHHCSCHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHHCCCEEEEEEEEEEecCcc---cHHHHHHHHHcCCCCEEEEECHHH-HHHHHHHHHhccchhhHhhcCCEEEE
Confidence 488999999999988754 24322 223334455457788877766654 333333321 24 788899
Q ss_pred EcCCCchHHHh
Q 045172 132 VGDMSDGALKR 142 (157)
Q Consensus 132 VGd~~~~~L~r 142 (157)
||..+-.++..
T Consensus 246 IG~~TA~al~~ 256 (286)
T 3d8t_A 246 VGRVTADALRE 256 (286)
T ss_dssp ESHHHHHHHHH
T ss_pred ECHHHHHHHHH
Confidence 99886555543
No 149
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=74.42 E-value=4.8 Score=29.42 Aligned_cols=19 Identities=16% Similarity=0.109 Sum_probs=14.6
Q ss_pred cHHHHHhhceEEEEecCCC
Q 045172 65 FADELKRAWFWVRMVLVKP 83 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkp 83 (157)
+-.+|+..|+.+-.++..+
T Consensus 50 ~L~~L~~~G~~l~i~Tn~~ 68 (176)
T 2fpr_A 50 QLLKLQKAGYKLVMITNQD 68 (176)
T ss_dssp HHHHHHHTTEEEEEEEECT
T ss_pred HHHHHHHCCCEEEEEECCc
Confidence 4556788899988888873
No 150
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=74.15 E-value=10 Score=27.55 Aligned_cols=39 Identities=10% Similarity=-0.095 Sum_probs=25.0
Q ss_pred HHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 94 MVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 94 ~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
+.+++ ..|+.++++.+.. .=.++.+.|++.|++ +||+.+
T Consensus 86 ~~~~~-~~g~~~i~~~~~~-~~~~l~~~a~~~Gi~--~igpnc 124 (138)
T 1y81_A 86 AKEAV-EAGFKKLWFQPGA-ESEEIRRFLEKAGVE--YSFGRC 124 (138)
T ss_dssp HHHHH-HTTCCEEEECTTS-CCHHHHHHHHHHTCE--EECSCC
T ss_pred HHHHH-HcCCCEEEEcCcc-HHHHHHHHHHHCCCE--EEcCCc
Confidence 33455 4788777666643 235777788888877 567654
No 151
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=73.94 E-value=20 Score=25.80 Aligned_cols=65 Identities=15% Similarity=0.069 Sum_probs=33.9
Q ss_pred cHHHHHhhceEEEEecCCCc--cHHHHHHHHHHHHhh-ccCcceEEEEcCCcchHHHHHHHHHcCC---eEEEEcCC
Q 045172 65 FADELKRAWFWVRMVLVKPQ--DADVLLRNYMVAMVD-KRRFGCLVVVSDDSDFVEVFQEATLRWL---KMVVVGDM 135 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpq--AAD~AL~~~~~~~~~-~r~v~clvLVSDDsDF~~~lr~Arer~l---~tVVVGd~ 135 (157)
+-..|+..|+.+-.++..|. .+...| +.+. ..-++.++. +..++-..+...+++-|+ .+++|||+
T Consensus 76 ~L~~L~~~G~~v~ivT~~~~~~~~~~~l-----~~~gl~~~f~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~igD~ 146 (187)
T 2wm8_A 76 VLKRLQSLGVPGAAASRTSEIEGANQLL-----ELFDLFRYFVHREI-YPGSKITHFERLQQKTGIPFSQMIFFDDE 146 (187)
T ss_dssp HHHHHHHHTCCEEEEECCSCHHHHHHHH-----HHTTCTTTEEEEEE-SSSCHHHHHHHHHHHHCCCGGGEEEEESC
T ss_pred HHHHHHHCCceEEEEeCCCChHHHHHHH-----HHcCcHhhcceeEE-EeCchHHHHHHHHHHcCCChHHEEEEeCC
Confidence 34567788988888888873 222222 2220 111233333 333443334444455565 37888887
No 152
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=73.69 E-value=3.8 Score=34.06 Aligned_cols=46 Identities=17% Similarity=0.212 Sum_probs=37.3
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccc
Q 045172 104 GCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 104 ~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
++++.+|-. .|-...++.|+++|.+|+.|-+..+..|.+.||.-+.
T Consensus 92 dl~i~iS~SG~T~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~ 140 (334)
T 3hba_A 92 GLVIVISQSGRSPDILAQARMAKNAGAFCVALVNDETAPIKDIVDVVIP 140 (334)
T ss_dssp CEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSGGGGTSSEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEeCCCCChHHHhcCEeee
Confidence 566666654 4667788999999999999998767899999998773
No 153
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=73.50 E-value=4.3 Score=33.75 Aligned_cols=46 Identities=15% Similarity=0.134 Sum_probs=36.5
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccc
Q 045172 104 GCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 104 ~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
++++.+|-. .|-...++.|+++|.+|+.|-+..+..|.+.||.-+.
T Consensus 93 dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 141 (344)
T 3fj1_A 93 ALCLAVSQSGKSPDIVAMTRNAGRDGALCVALTNDAASPLAGVSAHTID 141 (344)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTSSEEEE
T ss_pred cEEEEEcCCCCCHHHHHHHHHHHHCCCcEEEEECCCCChHHHhcCEeee
Confidence 555556543 3667788999999999999988767899999998763
No 154
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=72.65 E-value=3.8 Score=34.05 Aligned_cols=45 Identities=11% Similarity=0.162 Sum_probs=36.2
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcC-CeEEEEcCCCchHHHhhhhccc
Q 045172 104 GCLVVVSDD---SDFVEVFQEATLRW-LKMVVVGDMSDGALKRIANAFF 148 (157)
Q Consensus 104 ~clvLVSDD---sDF~~~lr~Arer~-l~tVVVGd~~~~~L~r~AD~~f 148 (157)
|+++.+|-. .|-..+++.|+++| .++|.|-+..+..|.+.||..+
T Consensus 101 dlvI~iS~SG~T~e~l~a~~~ak~~G~a~viaIT~~~~S~La~~ad~~l 149 (368)
T 1moq_A 101 SLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLAL 149 (368)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCCCeEEEEECCCCChHHHhCCEEE
Confidence 566667653 45667788899999 9999998876689999999776
No 155
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=72.63 E-value=8.5 Score=29.27 Aligned_cols=64 Identities=8% Similarity=-0.196 Sum_probs=38.0
Q ss_pred HHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEE
Q 045172 66 ADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMV 130 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tV 130 (157)
...|+..|+.+-.+..-.. .+..-.+.+.+.+...|+.++++......|..++..|.+.|++..
T Consensus 67 ~~~l~~~gl~i~~~~~~~~-~~~~~~~~~i~~A~~lGa~~v~~~p~~~~l~~l~~~a~~~gv~l~ 130 (257)
T 3lmz_A 67 HDKCAAHKVTGYAVGPIYM-KSEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYA 130 (257)
T ss_dssp HHHHHHTTCEEEEEEEEEE-CSHHHHHHHHHHHHHHTCSEEEEEECGGGHHHHHHHHHHHTCEEE
T ss_pred HHHHHHcCCeEEEEecccc-CCHHHHHHHHHHHHHhCCCEEEecCCHHHHHHHHHHHHHcCCEEE
Confidence 4455666766655432111 234444555555556777777776666667777777777777543
No 156
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=72.61 E-value=7.4 Score=31.03 Aligned_cols=87 Identities=14% Similarity=0.044 Sum_probs=49.7
Q ss_pred cCcccC-CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcc----eEEE---------EcCC-----cchHH
Q 045172 57 LTPKVG-YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFG----CLVV---------VSDD-----SDFVE 117 (157)
Q Consensus 57 l~pkvg-ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~----clvL---------VSDD-----sDF~~ 117 (157)
++|.-| -.+-.+|+.+|+.+-+|+..+.. ....+.+.+ |++ ..+- +|++ ++=..
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~----~~~~~~~~l---gl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~ 249 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTY----FSDYLKEQL---SLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADI 249 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHH----HHHHHHHHH---TCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHH----HHHHHHHHc---CCCeEEeeeeEeeCCeeeeeecccccChhhhHHH
Confidence 444433 34567889999999999887752 222222222 332 1111 2222 22233
Q ss_pred HHHHHHHcCC---eEEEEcCC-CchHHHhhhhcccch
Q 045172 118 VFQEATLRWL---KMVVVGDM-SDGALKRIANAFFSW 150 (157)
Q Consensus 118 ~lr~Arer~l---~tVVVGd~-~~~~L~r~AD~~fsW 150 (157)
+.+.+.+.|+ .+++|||+ +|-...+.|++.+-|
T Consensus 250 ~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 250 LLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence 4444555565 69999999 666666777776655
No 157
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=72.59 E-value=9.1 Score=28.67 Aligned_cols=64 Identities=16% Similarity=0.059 Sum_probs=43.5
Q ss_pred cHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc----chHHHHHHHHHcCC--eEEEEcCC
Q 045172 65 FADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS----DFVEVFQEATLRWL--KMVVVGDM 135 (157)
Q Consensus 65 la~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs----DF~~~lr~Arer~l--~tVVVGd~ 135 (157)
++..|+.+||.|... .+.|. ..+.+.+-..+.+.++|-|... .+..+++..++.|. -.|+||..
T Consensus 38 va~~l~~~G~eVi~lG~~~p~-------e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 38 VARALRDAGFEVVYTGLRQTP-------EQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp HHHHHHHTTCEEECCCSBCCH-------HHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred HHHHHHHCCCEEEECCCCCCH-------HHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 467899999999875 23343 2344444467889888877654 46667778888775 45677765
No 158
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=72.48 E-value=25 Score=25.58 Aligned_cols=78 Identities=14% Similarity=0.005 Sum_probs=40.0
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhh-ccCcceEEEEcCCcc-----hHHHHHHHHHcCC---eEEEEcC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVD-KRRFGCLVVVSDDSD-----FVEVFQEATLRWL---KMVVVGD 134 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~-~r~v~clvLVSDDsD-----F~~~lr~Arer~l---~tVVVGd 134 (157)
.+-..|+..|+.+-.++..+.. .....++.+. ..-++. +..|++.. =..+...+.+-|+ .+++|||
T Consensus 101 ~~l~~l~~~g~~~~i~t~~~~~----~~~~~l~~~~l~~~f~~-~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD 175 (241)
T 2hoq_A 101 KVLIRLKELGYELGIITDGNPV----KQWEKILRLELDDFFEH-VIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGD 175 (241)
T ss_dssp HHHHHHHHHTCEEEEEECSCHH----HHHHHHHHTTCGGGCSE-EEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHHCCCEEEEEECCCch----hHHHHHHHcCcHhhccE-EEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEECC
Confidence 4556788899999999887752 1222222220 111233 33444322 1222333344455 4788888
Q ss_pred C--CchHHHhhhhc
Q 045172 135 M--SDGALKRIANA 146 (157)
Q Consensus 135 ~--~~~~L~r~AD~ 146 (157)
+ +|-...+.|.+
T Consensus 176 ~~~~Di~~a~~aG~ 189 (241)
T 2hoq_A 176 RLYSDIYGAKRVGM 189 (241)
T ss_dssp CTTTTHHHHHHTTC
T ss_pred CchHhHHHHHHCCC
Confidence 7 34444555554
No 159
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=72.43 E-value=3.9 Score=33.58 Aligned_cols=63 Identities=13% Similarity=0.007 Sum_probs=41.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..++...|+.+.+.....+. ...+.+.++++|+|++.+.+ .++++.+.+.|..+|+||..
T Consensus 44 ~gi~~~a~~~g~~~~i~~~~~~~-------~~i~~l~~~~vDGiIi~~~~---~~~~~~l~~~~iPvV~i~~~ 106 (412)
T 4fe7_A 44 EGVGEYLQASQSEWDIFIEEDFR-------ARIDKIKDWLGDGVIADFDD---KQIEQALADVDVPIVGVGGS 106 (412)
T ss_dssp HHHHHHHHHHTCCEEEEECC-CC---------------CCCSEEEEETTC---HHHHHHHTTCCSCEEEEEEC
T ss_pred HHHHHHHHhcCCCeEEEecCCcc-------chhhhHhcCCCCEEEEecCC---hHHHHHHhhCCCCEEEecCC
Confidence 47788889999988776532221 11344447899999985443 45778888999999999865
No 160
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=72.37 E-value=13 Score=27.53 Aligned_cols=18 Identities=28% Similarity=0.268 Sum_probs=13.5
Q ss_pred HHHHHhhceEEEEecCCC
Q 045172 66 ADELKRAWFWVRMVLVKP 83 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkp 83 (157)
-.+|+..|+.+-.++..+
T Consensus 59 L~~L~~~G~~~~ivTn~~ 76 (211)
T 2gmw_A 59 MRELKKMGFALVVVTNQS 76 (211)
T ss_dssp HHHHHHTTCEEEEEEECT
T ss_pred HHHHHHCCCeEEEEECcC
Confidence 456777788888888777
No 161
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=71.58 E-value=4.3 Score=32.29 Aligned_cols=68 Identities=19% Similarity=0.038 Sum_probs=44.3
Q ss_pred cHHHHHhh--ceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCC--eEEEEcCC
Q 045172 65 FADELKRA--WFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWL--KMVVVGDM 135 (157)
Q Consensus 65 la~eLrRA--Gv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l--~tVVVGd~ 135 (157)
+...|+.+ |+.|-.. .-.+...|.. ..+..+. ..+.+.|++.+.+.+...+++.+++.|+ ...++|..
T Consensus 162 ~~~~l~~~~~g~~vv~~~~~~~~~~d~~--~~~~~i~-~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~ 234 (387)
T 3i45_A 162 FKELLLAARPEVTFVAEQWPALYKLDAG--PTVQALQ-QAEPEGLFNVLFGADLPKFVREGRVRGLFAGRQVVSML 234 (387)
T ss_dssp HHHHHHHHCTTCEEEEEECCCTTCCCHH--HHHHHHH-HTCCSEEEECCCTTHHHHHHHHHHHHTSSTTCEEEEEE
T ss_pred HHHHHHHhCCCcEEEeeecCCCCCcCHH--HHHHHHH-hCCCCEEEEcCccHHHHHHHHHHHHcCCCCCCeEEeec
Confidence 44566777 7665332 2233344432 2233333 5789999999999999999999999998 34555543
No 162
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=71.45 E-value=16 Score=26.72 Aligned_cols=75 Identities=21% Similarity=0.246 Sum_probs=37.8
Q ss_pred HHHHHhhceEEEEecCCCccHHHHHHHHHHHHhh-ccCcceEEEEcCCc-----chHHHHHHHHHcCC---eEEEEcCC-
Q 045172 66 ADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVD-KRRFGCLVVVSDDS-----DFVEVFQEATLRWL---KMVVVGDM- 135 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~-~r~v~clvLVSDDs-----DF~~~lr~Arer~l---~tVVVGd~- 135 (157)
-.+|+..|+.+-.++..+.. ....+.+.+. ..-++++ +.|++. +=..+...++.-|+ .+++|||+
T Consensus 92 l~~l~~~g~~~~i~s~~~~~----~~~~~l~~~gl~~~f~~i-~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~ 166 (222)
T 2nyv_A 92 LEALKSKGFKLAVVSNKLEE----LSKKILDILNLSGYFDLI-VGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTD 166 (222)
T ss_dssp HHHHHHTTCEEEEECSSCHH----HHHHHHHHTTCGGGCSEE-ECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred HHHHHHCCCeEEEEcCCCHH----HHHHHHHHcCCHHHheEE-EecCcCCCCCCChHHHHHHHHHhCCCchhEEEECCCH
Confidence 45677889999999987752 1222232221 1113433 334332 22223333344454 58889998
Q ss_pred CchHHHhhhh
Q 045172 136 SDGALKRIAN 145 (157)
Q Consensus 136 ~~~~L~r~AD 145 (157)
+|-...+.|.
T Consensus 167 ~Di~~a~~aG 176 (222)
T 2nyv_A 167 ADIEAGKRAG 176 (222)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHCC
Confidence 3333344444
No 163
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=71.37 E-value=19 Score=23.75 Aligned_cols=77 Identities=12% Similarity=0.062 Sum_probs=46.3
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHH----cCCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATL----RWLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Are----r~l~tVVVGd~~ 136 (157)
-.|...|.+.|+.|.++.+..+ +.+.+.....|++++=.+ +.+-.++++..++ .....+++++..
T Consensus 21 ~~l~~~L~~~g~~v~~~~~~~~---------a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 91 (142)
T 3cg4_A 21 IAVKTILSDAGFHIISADSGGQ---------CIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKN 91 (142)
T ss_dssp HHHHHHHHHTTCEEEEESSHHH---------HHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTT
T ss_pred HHHHHHHHHCCeEEEEeCCHHH---------HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCC
Confidence 3567778888998887654322 333444456666655332 3455678888887 456777787652
Q ss_pred c-----hHHHhhhhccc
Q 045172 137 D-----GALKRIANAFF 148 (157)
Q Consensus 137 ~-----~~L~r~AD~~f 148 (157)
+ .++...|+-++
T Consensus 92 ~~~~~~~~~~~g~~~~l 108 (142)
T 3cg4_A 92 APDAKMIGLQEYVVDYI 108 (142)
T ss_dssp CCCCSSTTGGGGEEEEE
T ss_pred CHHHHHHHHhcCccEEE
Confidence 1 34455555554
No 164
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=71.10 E-value=8.3 Score=31.42 Aligned_cols=87 Identities=15% Similarity=0.161 Sum_probs=48.3
Q ss_pred cCcccC-CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcc----eEEEEcC---------C-----cchHH
Q 045172 57 LTPKVG-YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFG----CLVVVSD---------D-----SDFVE 117 (157)
Q Consensus 57 l~pkvg-ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~----clvLVSD---------D-----sDF~~ 117 (157)
+.|.-| -.+-..|+..|+.+-.|+..|. ...+.+.+. .|++ ..+-+.| + ++=..
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~----~~~~~~l~~---lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~ 250 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLD----IFTQRLKAR---YQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQT 250 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEH----HHHHHHHHH---HTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccH----HHHHHHHHH---cCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHH
Confidence 444444 4566789999999999998776 222222322 2443 2222211 1 12122
Q ss_pred HHHHHHHcCC---eEEEEcCC-CchHHHhhhhcccch
Q 045172 118 VFQEATLRWL---KMVVVGDM-SDGALKRIANAFFSW 150 (157)
Q Consensus 118 ~lr~Arer~l---~tVVVGd~-~~~~L~r~AD~~fsW 150 (157)
+.+.+.+.|+ .+++|||+ +|-...+.|++.+-|
T Consensus 251 ~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 251 LVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 3333444555 68899998 655666667666655
No 165
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=70.49 E-value=9 Score=31.35 Aligned_cols=73 Identities=15% Similarity=0.169 Sum_probs=40.9
Q ss_pred HHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcc
Q 045172 69 LKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDMSDGALKRIANAF 147 (157)
Q Consensus 69 LrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~ 147 (157)
.+|.++.+++.+.+- ....++.+.+...|+++.+..+... +..++.+.+-..+...|||-.+ |+.+...++..
T Consensus 29 ~~~~~vi~Np~sg~~-----~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~~~~~~~~~~~d~vvv~GG-DGTl~~v~~~l 102 (332)
T 2bon_A 29 FPASLLILNGKSTDN-----LPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGG-DGTINEVSTAL 102 (332)
T ss_dssp -CCEEEEECSSSTTC-----HHHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHHHHHHTCSEEEEEES-HHHHHHHHHHH
T ss_pred cceEEEEECCCCCCC-----chHHHHHHHHHHcCCcEEEEEecCcchHHHHHHHHHhcCCCEEEEEcc-chHHHHHHHHH
Confidence 466777777554433 1234566666667777766666533 4445555555556655555444 45666665543
No 166
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=69.93 E-value=3.2 Score=32.88 Aligned_cols=68 Identities=15% Similarity=0.053 Sum_probs=44.9
Q ss_pred cHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeE---EEEcCC
Q 045172 65 FADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKM---VVVGDM 135 (157)
Q Consensus 65 la~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~t---VVVGd~ 135 (157)
+...|+++|..|-.. .-.+...|.. ..+..+. ..+.+.|++.++..+...+++.+++.|++. ++.|+.
T Consensus 162 ~~~~~~~~G~~v~~~~~~~~~~~d~~--~~l~~i~-~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (379)
T 3n0w_A 162 IRRELTAGGGQIVGSVRFPFETQDFS--SYLLQAK-ASGAQLIVSTSGGAANINIMKQAREFGLPSKTQKVGGMI 233 (379)
T ss_dssp HHHHHHHHTCEEEEEEEECTTCCCCH--HHHHHHH-HHTCSEEEECCCHHHHHHHHHHHHHTTCSCSSCEEECCB
T ss_pred HHHHHHHcCCEEEEEEeCCCCCCCHH--HHHHHHH-HCCCCEEEEecccchHHHHHHHHHHcCCCCCCcEEEecc
Confidence 455677888766432 1122333432 2333333 568899998888889999999999999986 566665
No 167
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=69.86 E-value=7.7 Score=32.91 Aligned_cols=79 Identities=18% Similarity=0.078 Sum_probs=52.0
Q ss_pred cHHHHHhhc-eEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC---Ccch---HHHHHHHHHcCCeEEE-EcCCC
Q 045172 65 FADELKRAW-FWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD---DSDF---VEVFQEATLRWLKMVV-VGDMS 136 (157)
Q Consensus 65 la~eLrRAG-v~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD---DsDF---~~~lr~Arer~l~tVV-VGd~~ 136 (157)
|..+|++-| =.|-.|.|++.....-+...+.+.+...|+++.+. ++ ++.. ..+++.+++.+...|| ||.++
T Consensus 34 l~~~l~~~g~~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~f-~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs 112 (407)
T 1vlj_A 34 IGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEV-SGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGS 112 (407)
T ss_dssp HHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEE-CCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHH
T ss_pred HHHHHHHcCCCeEEEEECchHHhhccHHHHHHHHHHHcCCeEEEe-cCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChh
Confidence 456677767 46677788766444346778888887778887644 33 5444 5566778888887777 88875
Q ss_pred chHHHhhh
Q 045172 137 DGALKRIA 144 (157)
Q Consensus 137 ~~~L~r~A 144 (157)
...+...+
T Consensus 113 viD~AK~i 120 (407)
T 1vlj_A 113 VVDSAKAV 120 (407)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444443
No 168
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=69.56 E-value=18 Score=24.13 Aligned_cols=79 Identities=9% Similarity=0.012 Sum_probs=47.2
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHH----cCCeEEEEcC
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATL----RWLKMVVVGD 134 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Are----r~l~tVVVGd 134 (157)
..-.|...|.+.|+.|.++++..+| .+.+.....|++++=.+ +.+-.++++..++ .+...|++++
T Consensus 20 ~~~~l~~~L~~~g~~v~~~~~~~~a---------~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~ 90 (147)
T 2zay_A 20 ALAASISALSQEGFDIIQCGNAIEA---------VPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSG 90 (147)
T ss_dssp GGHHHHHHHHHHTEEEEEESSHHHH---------HHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEES
T ss_pred HHHHHHHHHHHcCCeEEEeCCHHHH---------HHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeC
Confidence 3356777888899998876543332 22233345676666433 3445577888876 4677888887
Q ss_pred CCch-----HHHhhhhccc
Q 045172 135 MSDG-----ALKRIANAFF 148 (157)
Q Consensus 135 ~~~~-----~L~r~AD~~f 148 (157)
..+. ++...|+-++
T Consensus 91 ~~~~~~~~~~~~~g~~~~l 109 (147)
T 2zay_A 91 RATAKEEAQLLDMGFIDFI 109 (147)
T ss_dssp SCCHHHHHHHHHHTCSEEE
T ss_pred CCCHHHHHHHHhCCCCEEE
Confidence 6332 2344455544
No 169
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=69.38 E-value=13 Score=26.41 Aligned_cols=28 Identities=18% Similarity=0.019 Sum_probs=20.1
Q ss_pred cCcccC-CCcHHHHHhhceEEEEecCCCc
Q 045172 57 LTPKVG-YGFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 57 l~pkvg-ygla~eLrRAGv~V~~V~dkpq 84 (157)
+.|.-| -.+-..|+..|+.+-.++..|.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~ 102 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFD 102 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCch
Confidence 334443 4566788899999999988765
No 170
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=69.28 E-value=11 Score=35.88 Aligned_cols=40 Identities=13% Similarity=0.079 Sum_probs=31.5
Q ss_pred cCCcchHHHHHHHHHcCCeEEEEcCC-CchHHHhhhhcccc
Q 045172 110 SDDSDFVEVFQEATLRWLKMVVVGDM-SDGALKRIANAFFS 149 (157)
Q Consensus 110 SDDsDF~~~lr~Arer~l~tVVVGd~-~~~~L~r~AD~~fs 149 (157)
+...+-..+++..++.|-.+..+||+ +|-..-+.||+.+.
T Consensus 703 ~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIA 743 (1034)
T 3ixz_A 703 TSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVA 743 (1034)
T ss_pred cCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEE
Confidence 33445677888888999999999999 77666778888775
No 171
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=68.90 E-value=14 Score=26.25 Aligned_cols=20 Identities=10% Similarity=0.041 Sum_probs=16.0
Q ss_pred cHHHHHhhceEEEEecCCCc
Q 045172 65 FADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpq 84 (157)
+-.+|+..|+.+-.++..|.
T Consensus 104 ~l~~l~~~g~~~~i~s~~~~ 123 (230)
T 3um9_A 104 ALQQLRAAGLKTAILSNGSR 123 (230)
T ss_dssp HHHHHHHTTCEEEEEESSCH
T ss_pred HHHHHHhCCCeEEEEeCCCH
Confidence 45678888999999988875
No 172
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=68.85 E-value=26 Score=24.19 Aligned_cols=28 Identities=18% Similarity=0.173 Sum_probs=19.6
Q ss_pred cCcccC-CCcHHHHHhhceEEEEecCCCc
Q 045172 57 LTPKVG-YGFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 57 l~pkvg-ygla~eLrRAGv~V~~V~dkpq 84 (157)
+.|.-| ..+-.+|+..|+.+-.++..+.
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~ 111 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQ 111 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCH
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcH
Confidence 444444 3456778888998888888775
No 173
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=68.50 E-value=1.2 Score=34.83 Aligned_cols=76 Identities=20% Similarity=0.199 Sum_probs=46.9
Q ss_pred CCcHHHHHhhceEEEEecC---CCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH-----cCCeEEEEcC
Q 045172 63 YGFADELKRAWFWVRMVLV---KPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL-----RWLKMVVVGD 134 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~d---kpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are-----r~l~tVVVGd 134 (157)
..|+..|+.+|+.|..++- .|...+. ..+.+.+....+|+++ +++-|-...++..+.+ .+++.++||.
T Consensus 146 ~~L~~~L~~~G~~v~~~~vY~~~~~~~~~---~~~~~~l~~~~~d~v~-ftS~s~v~~~~~~~~~~~~~l~~~~~~aIG~ 221 (254)
T 4es6_A 146 EFLAERLRGQGVQVDYLPLYRRRAPDYPA---GELLARVRAERLNGLV-VSSGQGLQNLYQLAAADWPEIGRLPLFVPSP 221 (254)
T ss_dssp CHHHHHHHHTTCEEEEEECEEEECCCCCT---THHHHHHHHTTCCEEE-CCSHHHHHHHHHHHGGGHHHHTTSCEEESSH
T ss_pred HHHHHHHHHCCCEEEEEeEEEeeCCCCCH---HHHHHHHHhCCCCEEE-EcCHHHHHHHHHHhhHHHHHHhCCeEEEECH
Confidence 4489999999999876621 1111110 1112333346788766 5666777777776643 5788899998
Q ss_pred CCchHHHh
Q 045172 135 MSDGALKR 142 (157)
Q Consensus 135 ~~~~~L~r 142 (157)
.+-.++..
T Consensus 222 ~Ta~~l~~ 229 (254)
T 4es6_A 222 RVAEMARE 229 (254)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 86555544
No 174
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=68.47 E-value=11 Score=27.30 Aligned_cols=18 Identities=17% Similarity=0.178 Sum_probs=12.8
Q ss_pred HHHHHhhceEEEEecCCCc
Q 045172 66 ADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpq 84 (157)
-..|+. |+.+-.++.+|.
T Consensus 93 l~~L~~-~~~l~i~T~~~~ 110 (210)
T 2ah5_A 93 LEELSS-SYPLYITTTKDT 110 (210)
T ss_dssp HHHHHT-TSCEEEEEEEEH
T ss_pred HHHHHc-CCeEEEEeCCCH
Confidence 355677 888777777765
No 175
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=68.35 E-value=11 Score=31.18 Aligned_cols=86 Identities=14% Similarity=0.062 Sum_probs=49.5
Q ss_pred CcccC-CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEE---E----------EcCC-----cchHHH
Q 045172 58 TPKVG-YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLV---V----------VSDD-----SDFVEV 118 (157)
Q Consensus 58 ~pkvg-ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clv---L----------VSDD-----sDF~~~ 118 (157)
+|.-| -.+-..|++.|+.+-.++..+.. ....+. ...|++.+. | ++++ ++-..+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~----~~~~~~---~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~ 328 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRR----IIEPLA---EELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATAL 328 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHH----HHHHHH---HHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHH----HHHHHH---HHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHH
Confidence 44444 55677899999999999987762 222222 234554332 1 2222 222233
Q ss_pred HHHHHHcCC---eEEEEcCC-CchHHHhhhhcccch
Q 045172 119 FQEATLRWL---KMVVVGDM-SDGALKRIANAFFSW 150 (157)
Q Consensus 119 lr~Arer~l---~tVVVGd~-~~~~L~r~AD~~fsW 150 (157)
...+.+.|+ .++.|||+ +|-...+.|.+.+-|
T Consensus 329 ~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 329 REFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence 334444565 69999998 655566666665554
No 176
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=68.01 E-value=8.4 Score=28.30 Aligned_cols=35 Identities=20% Similarity=0.222 Sum_probs=27.4
Q ss_pred CcceEEEEcCCc----chHHHHHHHHHcCCeEEEEcCCC
Q 045172 102 RFGCLVVVSDDS----DFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 102 ~v~clvLVSDDs----DF~~~lr~Arer~l~tVVVGd~~ 136 (157)
+-..++|+||-. +...+++.+++.|+...+||-++
T Consensus 111 ~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~ 149 (218)
T 3ibs_A 111 VGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGM 149 (218)
T ss_dssp CCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESC
T ss_pred CCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecC
Confidence 346899999853 48899999999999887776553
No 177
>1dp4_A Atrial natriuretic peptide receptor A; periplasmic binding protein fold, dimer, hormone/growth FACT receptor, lyase complex; HET: NAG; 2.00A {Rattus norvegicus} SCOP: c.93.1.1 PDB: 1t34_A* 3a3k_A*
Probab=67.69 E-value=9.3 Score=30.73 Aligned_cols=67 Identities=10% Similarity=0.012 Sum_probs=44.4
Q ss_pred cHHHHHh-hceEEEEecCC-CccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCe----EEEEcCC
Q 045172 65 FADELKR-AWFWVRMVLVK-PQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLK----MVVVGDM 135 (157)
Q Consensus 65 la~eLrR-AGv~V~~V~dk-pqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~----tVVVGd~ 135 (157)
+..+|.+ .|+-|-...-- +...|. ...+..+. . +.+.|++.++..+...+++.|++.|+. +.+.+|.
T Consensus 171 ~~~~~~~~~g~~v~~~~~~~~~~~d~--~~~l~~i~-~-~~~viv~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~~~ 243 (435)
T 1dp4_A 171 LYMRVRERLNITVNHQEFVEGDPDHY--PKLLRAVR-R-KGRVIYICSSPDAFRNLMLLALNAGLTGEDYVFFHLDV 243 (435)
T ss_dssp HHHHHHHHHCCEEEEEEECTTCGGGH--HHHHHHHH-H-HCSEEEEESCHHHHHHHHHHHHHTTCCTTTCEEEEECT
T ss_pred HHHHHHhhcCeEEEEEEEecCchhhH--HHHHHHHH-h-hCceEEEecChHHHHHHHHHHHHcCCCCCCEEEEEEec
Confidence 3456677 88776543322 344553 23333333 4 789999999999999999999999986 4455554
No 178
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=67.31 E-value=14 Score=26.60 Aligned_cols=21 Identities=24% Similarity=0.156 Sum_probs=16.2
Q ss_pred CcHHHHHhhceEEEEecCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq 84 (157)
.+-.+|+..|+.+-.++..+.
T Consensus 110 ~~l~~l~~~g~~~~i~T~~~~ 130 (231)
T 3kzx_A 110 ELLDTLKENNITMAIVSNKNG 130 (231)
T ss_dssp HHHHHHHHTTCEEEEEEEEEH
T ss_pred HHHHHHHHCCCeEEEEECCCH
Confidence 455678888999888887765
No 179
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=67.31 E-value=4.3 Score=30.95 Aligned_cols=72 Identities=15% Similarity=0.101 Sum_probs=47.1
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcch------------------HHHHHHH
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDF------------------VEVFQEA 122 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF------------------~~~lr~A 122 (157)
+|.-++.+|.+.|+.|..+...+ .|..=...+.+.+...++|.++-......+ ..+++.|
T Consensus 17 iG~~l~~~L~~~g~~V~~~~r~~--~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 94 (287)
T 3sc6_A 17 LGKQLQEELNPEEYDIYPFDKKL--LDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVAS 94 (287)
T ss_dssp HHHHHHHHSCTTTEEEEEECTTT--SCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecccc--cCCCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 34567889999999999875432 233222333444433489999877654432 3488899
Q ss_pred HHcCCeEEEEcC
Q 045172 123 TLRWLKMVVVGD 134 (157)
Q Consensus 123 rer~l~tVVVGd 134 (157)
++.|.+.|.+|-
T Consensus 95 ~~~~~~~v~~SS 106 (287)
T 3sc6_A 95 QLVGAKLVYIST 106 (287)
T ss_dssp HHHTCEEEEEEE
T ss_pred HHcCCeEEEEch
Confidence 999998777764
No 180
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=67.26 E-value=29 Score=24.23 Aligned_cols=77 Identities=13% Similarity=0.037 Sum_probs=42.5
Q ss_pred CcHHHHHhhc-eEEEEecCCCccHHHHHHHHHHHHhh-ccCcceEEEEcCCcchHHHHHHHHHcCCe---EEEEcCC--C
Q 045172 64 GFADELKRAW-FWVRMVLVKPQDADVLLRNYMVAMVD-KRRFGCLVVVSDDSDFVEVFQEATLRWLK---MVVVGDM--S 136 (157)
Q Consensus 64 gla~eLrRAG-v~V~~V~dkpqAAD~AL~~~~~~~~~-~r~v~clvLVSDDsDF~~~lr~Arer~l~---tVVVGd~--~ 136 (157)
.+-..|+..| +.+-.++..+.. ......+.+. ..-++.++ .++.++=..+...+..-|+. ++.|||+ +
T Consensus 112 ~~l~~l~~~g~~~~~i~t~~~~~----~~~~~l~~~~~~~~f~~~~-~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~ 186 (234)
T 3ddh_A 112 ETLKTLKETGKYKLVVATKGDLL----DQENKLERSGLSPYFDHIE-VMSDKTEKEYLRLLSILQIAPSELLMVGNSFKS 186 (234)
T ss_dssp HHHHHHHHHCCCEEEEEEESCHH----HHHHHHHHHTCGGGCSEEE-EESCCSHHHHHHHHHHHTCCGGGEEEEESCCCC
T ss_pred HHHHHHHhCCCeEEEEEeCCchH----HHHHHHHHhCcHhhhheee-ecCCCCHHHHHHHHHHhCCCcceEEEECCCcHH
Confidence 4456788999 888888866641 1222222221 12234443 45555544455555556664 7899998 3
Q ss_pred chHHHhhhh
Q 045172 137 DGALKRIAN 145 (157)
Q Consensus 137 ~~~L~r~AD 145 (157)
|-...+.|-
T Consensus 187 Di~~a~~aG 195 (234)
T 3ddh_A 187 DIQPVLSLG 195 (234)
T ss_dssp CCHHHHHHT
T ss_pred HhHHHHHCC
Confidence 444444444
No 181
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=67.07 E-value=13 Score=26.96 Aligned_cols=64 Identities=17% Similarity=0.183 Sum_probs=42.9
Q ss_pred cHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc----hHHHHHHHHHcCC--eEEEEcCC
Q 045172 65 FADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD----FVEVFQEATLRWL--KMVVVGDM 135 (157)
Q Consensus 65 la~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD----F~~~lr~Arer~l--~tVVVGd~ 135 (157)
++..|+.+||.|.-. ++.|. +.+.+.+-..+.+.++|-|.... +.++++..+++|. -.|+||..
T Consensus 23 v~~~l~~~G~~Vi~lG~~~p~-------e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 23 LDHAFTNAGFNVVNIGVLSPQ-------ELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp HHHHHHHTTCEEEEEEEEECH-------HHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred HHHHHHHCCCEEEECCCCCCH-------HHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 357899999999944 44444 23444444568898888877654 3456777888776 45677764
No 182
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=67.05 E-value=17 Score=28.67 Aligned_cols=42 Identities=14% Similarity=0.007 Sum_probs=28.2
Q ss_pred HHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 91 RNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 91 ~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
...+.+.+...+.|++ |+|...|...+ .|+..|+.+|.+.-.
T Consensus 103 ~~~l~~~l~~~~PD~V--v~~~~~~~~~~-aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 103 LPEYLRLAEAWRPSVL--LVDVCALIGRV-LGGLLDLPVVLHRWG 144 (391)
T ss_dssp HHHHHHHHHHHCCSEE--EEETTCHHHHH-HHHHTTCCEEEECCS
T ss_pred HHHHHHHHHhcCCCEE--EeCcchhHHHH-HHHHhCCCEEEEecC
Confidence 3444556655677865 44667776655 678899999988644
No 183
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=67.05 E-value=16 Score=26.24 Aligned_cols=20 Identities=20% Similarity=0.092 Sum_probs=15.6
Q ss_pred cHHHHHhhceEEEEecCCCc
Q 045172 65 FADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpq 84 (157)
+-.+|+..|+.+-.++..|.
T Consensus 103 ~l~~l~~~g~~~~i~t~~~~ 122 (232)
T 1zrn_A 103 SLRELKRRGLKLAILSNGSP 122 (232)
T ss_dssp HHHHHHHTTCEEEEEESSCH
T ss_pred HHHHHHHCCCEEEEEeCCCH
Confidence 34567888999888888875
No 184
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=66.76 E-value=18 Score=26.92 Aligned_cols=21 Identities=24% Similarity=0.282 Sum_probs=16.2
Q ss_pred CcHHHHHhhceEEEEecCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq 84 (157)
.+-.+|+..|+.+-.++..+.
T Consensus 121 ~~l~~l~~~g~~~~i~t~~~~ 141 (243)
T 2hsz_A 121 ETLEALKAQGYILAVVTNKPT 141 (243)
T ss_dssp HHHHHHHHTTCEEEEECSSCH
T ss_pred HHHHHHHHCCCEEEEEECCcH
Confidence 344567888999999988876
No 185
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=66.68 E-value=8.9 Score=30.98 Aligned_cols=23 Identities=13% Similarity=0.219 Sum_probs=10.8
Q ss_pred CcceEEEEcCCcchHHHHHHHHH
Q 045172 102 RFGCLVVVSDDSDFVEVFQEATL 124 (157)
Q Consensus 102 ~v~clvLVSDDsDF~~~lr~Are 124 (157)
+.|++|.+.-|--..+++.-+-.
T Consensus 63 ~~d~vv~~GGDGTl~~v~~~l~~ 85 (304)
T 3s40_A 63 KVDLIIVFGGDGTVFECTNGLAP 85 (304)
T ss_dssp TCSEEEEEECHHHHHHHHHHHTT
T ss_pred CCCEEEEEccchHHHHHHHHHhh
Confidence 44444444444444444444433
No 186
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=66.48 E-value=5.9 Score=30.73 Aligned_cols=70 Identities=6% Similarity=0.021 Sum_probs=49.4
Q ss_pred cCCCcHHHHHhhceEEEEecCCCc----------cHHHHHHHHHHHHhhccCcceEEEEcCCcch--------------H
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQ----------DADVLLRNYMVAMVDKRRFGCLVVVSDDSDF--------------V 116 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpq----------AAD~AL~~~~~~~~~~r~v~clvLVSDDsDF--------------~ 116 (157)
+|.-|+.+|.+.|+.|..+...|. ..|.. ...+.+.+ .++|+++-....... .
T Consensus 14 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~--~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~ 90 (311)
T 3m2p_A 14 LGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQL--NDVDAVVHLAATRGSQGKISEFHDNEILTQ 90 (311)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHT--TTCSEEEECCCCCCSSSCGGGTHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhh--cCCCEEEEccccCCCCChHHHHHHHHHHHH
Confidence 345688899999999988755544 24666 56666666 399999877654332 5
Q ss_pred HHHHHHHHcCCeEE-EEc
Q 045172 117 EVFQEATLRWLKMV-VVG 133 (157)
Q Consensus 117 ~~lr~Arer~l~tV-VVG 133 (157)
.+++.|++.|++.+ .+|
T Consensus 91 ~ll~a~~~~~~~r~v~~S 108 (311)
T 3m2p_A 91 NLYDACYENNISNIVYAS 108 (311)
T ss_dssp HHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEc
Confidence 78899999999844 444
No 187
>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid BIN structural genomics, structural genomics consortium; HET: Z99 NAG; 1.90A {Homo sapiens} SCOP: c.93.1.1 PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* 3lmk_A*
Probab=66.03 E-value=19 Score=30.62 Aligned_cols=70 Identities=4% Similarity=-0.015 Sum_probs=45.6
Q ss_pred cHHHHHhhceEEE---EecCCCccHHHHHHHHHHHHhh-ccCcceEEEEcCCcchHHHHHHHHHcCCeE--E-EEcCCC
Q 045172 65 FADELKRAWFWVR---MVLVKPQDADVLLRNYMVAMVD-KRRFGCLVVVSDDSDFVEVFQEATLRWLKM--V-VVGDMS 136 (157)
Q Consensus 65 la~eLrRAGv~V~---~V~dkpqAAD~AL~~~~~~~~~-~r~v~clvLVSDDsDF~~~lr~Arer~l~t--V-VVGd~~ 136 (157)
+..++.+.|+-|- .++..+...|.. ..+..+.. +-.+..+++.++..+...+++.+++.|+.. + +.+|++
T Consensus 217 ~~~~~~~~Gi~v~~~~~i~~~~~~~d~~--~~l~~i~~~~~~a~vii~~~~~~~~~~l~~~~~~~g~~~k~~~i~s~~w 293 (496)
T 3ks9_A 217 FKELAAQEGLSIAHSDKIYSNAGEKSFD--RLLRKLRERLPKARVVVCFCEGMTVRGLLSAMRRLGVVGEFSLIGSDGW 293 (496)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCCHHHHH--HHHHHHHTTTTTTCEEEEECCHHHHHHHHHHHHHHTCCSCCEEEECTTT
T ss_pred HHHHHHHcCceEEEEEEECCCCCHHHHH--HHHHHHHhccCceEEEEEecChHHHHHHHHHHHHhCCCCcEEEEEechh
Confidence 4567888897765 445445555543 22333221 126788888888889999999999999983 4 445554
No 188
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=65.82 E-value=20 Score=25.45 Aligned_cols=21 Identities=24% Similarity=0.301 Sum_probs=15.9
Q ss_pred CcHHHHHhhceEEEEecCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq 84 (157)
.+-..|+..|+.+-.++..+.
T Consensus 93 ~~l~~l~~~g~~~~i~t~~~~ 113 (226)
T 3mc1_A 93 ALLSSLKDYGFHLVVATSKPT 113 (226)
T ss_dssp HHHHHHHHHTCEEEEEEEEEH
T ss_pred HHHHHHHHCCCeEEEEeCCCH
Confidence 345678888999888887765
No 189
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=65.61 E-value=13 Score=28.72 Aligned_cols=67 Identities=10% Similarity=0.086 Sum_probs=40.7
Q ss_pred CCcHHHHHhhce----EEEE--ecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWF----WVRM--VLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv----~V~~--V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
-|+.++|...|+ .|.. ....- |..-...+.+.+.++++|.|++++++. ...+.. ...++-+|.+|..
T Consensus 27 ~gi~~~l~~~Gy~~g~~v~l~~~~~~~---~~~~~~~~~~~l~~~~vDgII~~~~~~-~~~~~~--~~~~iPvV~~~~~ 99 (302)
T 2qh8_A 27 QGLLDGLKAKGYEEGKNLEFDYKTAQG---NPAIAVQIARQFVGENPDVLVGIATPT-AQALVS--ATKTIPIVFTAVT 99 (302)
T ss_dssp HHHHHHHHHTTCCBTTTEEEEEEECTT---CHHHHHHHHHHHHHTCCSEEEEESHHH-HHHHHH--HCSSSCEEEEEES
T ss_pred HHHHHHHHHcCCCCCCceEEEEecCCC---CHHHHHHHHHHHHhCCCCEEEECChHH-HHHHHh--cCCCcCEEEEecC
Confidence 367889999999 4443 22222 222333444555579999998876432 222332 2678899988743
No 190
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=65.50 E-value=16 Score=26.84 Aligned_cols=76 Identities=16% Similarity=0.102 Sum_probs=38.6
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhh-ccCcceEEEEcCCc-----chHHHHHHHHHcCC---eEEEEcCC
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVD-KRRFGCLVVVSDDS-----DFVEVFQEATLRWL---KMVVVGDM 135 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~-~r~v~clvLVSDDs-----DF~~~lr~Arer~l---~tVVVGd~ 135 (157)
+-..|+..|+.+-.++.+|.. ....+++.+. . -++.++ -|++. +=..+...++.-|+ .+++|||+
T Consensus 118 ~l~~l~~~g~~~~i~t~~~~~----~~~~~l~~~~l~-~f~~~~-~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs 191 (240)
T 2hi0_A 118 LMKNLRQKGVKLAVVSNKPNE----AVQVLVEELFPG-SFDFAL-GEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDS 191 (240)
T ss_dssp HHHHHHHTTCEEEEEEEEEHH----HHHHHHHHHSTT-TCSEEE-EECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESS
T ss_pred HHHHHHHCCCEEEEEeCCCHH----HHHHHHHHcCCc-ceeEEE-ecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCC
Confidence 345678889998888887762 1222333221 1 345433 33332 11223333444455 47888887
Q ss_pred -CchHHHhhhhc
Q 045172 136 -SDGALKRIANA 146 (157)
Q Consensus 136 -~~~~L~r~AD~ 146 (157)
+|-.-.+.|.+
T Consensus 192 ~~Di~~a~~aG~ 203 (240)
T 2hi0_A 192 EIDIQTARNSEM 203 (240)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCC
Confidence 33333444444
No 191
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=65.28 E-value=5.9 Score=33.36 Aligned_cols=45 Identities=16% Similarity=0.306 Sum_probs=36.9
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcC-CeEEEEcCCCchHHHhhhhccc
Q 045172 104 GCLVVVSDD---SDFVEVFQEATLRW-LKMVVVGDMSDGALKRIANAFF 148 (157)
Q Consensus 104 ~clvLVSDD---sDF~~~lr~Arer~-l~tVVVGd~~~~~L~r~AD~~f 148 (157)
+++|.+|-. .|-...++.|+++| .+|+.|-+..+..|.+.||.-+
T Consensus 103 dlvI~iS~SG~T~e~l~al~~ak~~G~a~~iaIT~~~~S~La~~aD~~l 151 (372)
T 3tbf_A 103 SLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAF 151 (372)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHTTTTEEEEEEEESSSSSHHHHHSSEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCCceEEEEcCCCCChHHHhCCEee
Confidence 666666654 46677888999999 9999999887789999999877
No 192
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=65.25 E-value=18 Score=26.24 Aligned_cols=43 Identities=14% Similarity=0.077 Sum_probs=27.9
Q ss_pred HHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 90 LRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 90 L~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
...-+.+++ ..|+..++ ++....=.++++.|++.|++ +||+.+
T Consensus 90 ~~~vv~~~~-~~gi~~i~-~~~g~~~~~l~~~a~~~Gi~--vvGpnc 132 (144)
T 2d59_A 90 TMEYVEQAI-KKGAKVVW-FQYNTYNREASKKADEAGLI--IVANRC 132 (144)
T ss_dssp HHHHHHHHH-HHTCSEEE-ECTTCCCHHHHHHHHHTTCE--EEESCC
T ss_pred HHHHHHHHH-HcCCCEEE-ECCCchHHHHHHHHHHcCCE--EEcCCc
Confidence 333344455 57787765 44445567888888888887 677765
No 193
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=64.90 E-value=4.4 Score=29.25 Aligned_cols=21 Identities=14% Similarity=-0.034 Sum_probs=15.7
Q ss_pred CcHHHHHhhceEEEEecCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq 84 (157)
.+-.+|+..|+.+-.++..+.
T Consensus 115 ~~l~~l~~~g~~~~i~t~~~~ 135 (247)
T 3dv9_A 115 EVLTKIKSEGLTPMVVTGSGQ 135 (247)
T ss_dssp HHHHHHHHTTCEEEEECSCC-
T ss_pred HHHHHHHHcCCcEEEEcCCch
Confidence 345678888999988888775
No 194
>1req_B Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 1e1c_B* 2req_B* 3req_B* 4req_B* 5req_B* 6req_B* 7req_B*
Probab=64.57 E-value=8.8 Score=35.71 Aligned_cols=76 Identities=11% Similarity=-0.006 Sum_probs=50.7
Q ss_pred HHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcch----HHHHHHHHHcCCeEEEEcCC--Cc--
Q 045172 66 ADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDF----VEVFQEATLRWLKMVVVGDM--SD-- 137 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF----~~~lr~Arer~l~tVVVGd~--~~-- 137 (157)
+.-|.-+||-|..- ...+. ..+.+.+-.-+++.+||-|-+... ..+++..+++|+..|+||.. ++
T Consensus 531 a~~l~~aGfeVi~~-g~~~t------ee~v~aa~e~~adiv~lSsl~~~~~~~~~~v~~~Lk~aG~~~V~vgG~P~~d~~ 603 (637)
T 1req_B 531 SPVWHIAGIDTPQV-EGGTT------AEIVEAFKKSGAQVADLCSSAKVYAQQGLEVAKALKAAGAKALYLSGAFKEFGD 603 (637)
T ss_dssp HHHHHHTTCBCCEE-ECCCH------HHHHHHHHHHTCSEEEEECCHHHHHHHHHHHHHHHHHTTCSEEEEESCGGGGGG
T ss_pred HHHHHhCCeeEEeC-CCCCC------HHHHHHHHhcCCCEEEEecccHHHHHHHHHHHHHHHhCCCCeEEEeCCCCccch
Confidence 35788999999873 33342 233333335689999999988865 55667788999988888875 11
Q ss_pred --hHHHhhhhccc
Q 045172 138 --GALKRIANAFF 148 (157)
Q Consensus 138 --~~L~r~AD~~f 148 (157)
..+...+|-+|
T Consensus 604 ~~~~~~~G~D~~~ 616 (637)
T 1req_B 604 DAAEAEKLIDGRL 616 (637)
T ss_dssp GHHHHHHHCCCEE
T ss_pred hhHHHHhccceEe
Confidence 23444566555
No 195
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=64.43 E-value=33 Score=23.88 Aligned_cols=20 Identities=15% Similarity=0.057 Sum_probs=15.1
Q ss_pred cHHHHHhhceEEEEecCCCc
Q 045172 65 FADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpq 84 (157)
+-..|+..|+.+-.++..+.
T Consensus 102 ~l~~l~~~g~~~~i~t~~~~ 121 (226)
T 1te2_A 102 AVALCKEQGLLVGLASASPL 121 (226)
T ss_dssp HHHHHHHTTCEEEEEESSCH
T ss_pred HHHHHHHCCCcEEEEeCCcH
Confidence 34567788998888888775
No 196
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=63.90 E-value=32 Score=23.48 Aligned_cols=77 Identities=13% Similarity=0.065 Sum_probs=47.6
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc----CCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR----WLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer----~l~tVVVGd~~ 136 (157)
..|...|.+.|+.|.++++..+ +.+.+.....|++++=.+ +.+=.++++..|+. .+..+++.+..
T Consensus 21 ~~l~~~L~~~g~~v~~~~~~~~---------al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 21 EHLKHILEETGYQTEHVRNGRE---------AVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHHHTTTCEEEEESSHHH---------HHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHHHCCCEEEEeCCHHH---------HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 4567788889999887654322 234444566777766543 34556778888874 57788887653
Q ss_pred c-----hHHHhhhhccc
Q 045172 137 D-----GALKRIANAFF 148 (157)
Q Consensus 137 ~-----~~L~r~AD~~f 148 (157)
+ .++...||-++
T Consensus 92 ~~~~~~~~~~~g~~~~l 108 (154)
T 3gt7_A 92 DPRDVVRSLECGADDFI 108 (154)
T ss_dssp SHHHHHHHHHHCCSEEE
T ss_pred ChHHHHHHHHCCCCEEE
Confidence 3 23444455554
No 197
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=63.67 E-value=22 Score=27.14 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=20.0
Q ss_pred HHHHHHHcCC---eEEEEcCC-CchHHHhhhhcccch
Q 045172 118 VFQEATLRWL---KMVVVGDM-SDGALKRIANAFFSW 150 (157)
Q Consensus 118 ~lr~Arer~l---~tVVVGd~-~~~~L~r~AD~~fsW 150 (157)
+...+.+-|+ .+++|||+ +|-...+.|...+-|
T Consensus 216 ~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~ 252 (289)
T 3gyg_A 216 VTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL 252 (289)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC
T ss_pred HHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE
Confidence 3334444555 47888888 666666666665544
No 198
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=63.66 E-value=6.6 Score=33.22 Aligned_cols=67 Identities=9% Similarity=0.078 Sum_probs=50.4
Q ss_pred eEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccchhhh
Q 045172 74 FWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFSWSDL 153 (157)
Q Consensus 74 v~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fsW~ev 153 (157)
-+|-.||+||+ +.-...|.|+ +-.-..+++...++.|.++-++=|..+..+...+.+..+|-|+
T Consensus 88 ~~vtLVPEkre-----------E~TTegGldv-----~~~~L~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~GAd~IEL 151 (260)
T 3o6c_A 88 HRVTLVPEKRE-----------ELTTEGGLCL-----NHAKLKQSIEKLQNANIEVSLFINPSLEDIEKSKILKAQFIEL 151 (260)
T ss_dssp SEEEECCCSGG-----------GBCTTSSBCT-----TCTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHTTCSEEEE
T ss_pred CEEEECCCCCC-----------ccCCCCChhh-----CHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEE
Confidence 45666666666 2223455555 4555688999999999999999999888888888988888888
Q ss_pred hcC
Q 045172 154 LMG 156 (157)
Q Consensus 154 ~~G 156 (157)
-+|
T Consensus 152 hTG 154 (260)
T 3o6c_A 152 HTG 154 (260)
T ss_dssp CCH
T ss_pred ech
Confidence 766
No 199
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=63.29 E-value=37 Score=26.07 Aligned_cols=65 Identities=8% Similarity=0.082 Sum_probs=44.5
Q ss_pred eEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCCchHH
Q 045172 74 FWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMSDGAL 140 (157)
Q Consensus 74 v~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~~~~L 140 (157)
+.+-.|.+.+. .......+.+.+...|+++-+.|...+-...+++.|++.+...+|+|-...+.+
T Consensus 201 l~ll~v~~~~~--~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dLlV~G~~~~~~~ 265 (294)
T 3loq_A 201 LHIIHVSEDGD--KTADLRVMEEVIGAEGIEVHVHIESGTPHKAILAKREEINATTIFMGSRGAGSV 265 (294)
T ss_dssp EEEEEECSSSC--CHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHHHHTTCSEEEEECCCCSCH
T ss_pred EEEEEEccCch--HHHHHHHHHHHHHHcCCcEEEEEecCCHHHHHHHHHHhcCcCEEEEeCCCCCCc
Confidence 44445544443 234455666666677887666666667778899999999999999998743333
No 200
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=62.87 E-value=7.1 Score=27.01 Aligned_cols=71 Identities=15% Similarity=0.123 Sum_probs=39.8
Q ss_pred CCCcHHHHHhhceEEEEecCCCccHHHHHHH------------HHHHHhhccCcceEEEEcCC-cchHHHHHHHHHcCCe
Q 045172 62 GYGFADELKRAWFWVRMVLVKPQDADVLLRN------------YMVAMVDKRRFGCLVVVSDD-SDFVEVFQEATLRWLK 128 (157)
Q Consensus 62 gygla~eLrRAGv~V~~V~dkpqAAD~AL~~------------~~~~~~~~r~v~clvLVSDD-sDF~~~lr~Arer~l~ 128 (157)
|..++..|.+.|+.|..+...|+..+.+... ..++.+.-.++|.+++.++| ..-..++..|++.|..
T Consensus 18 G~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~ 97 (141)
T 3llv_A 18 GVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDV 97 (141)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCc
Confidence 3447888999999998887766644433211 11111112356777665553 3334566777776644
Q ss_pred EEEE
Q 045172 129 MVVV 132 (157)
Q Consensus 129 tVVV 132 (157)
.+++
T Consensus 98 ~iia 101 (141)
T 3llv_A 98 YAIV 101 (141)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 3433
No 201
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=62.47 E-value=3 Score=30.36 Aligned_cols=63 Identities=10% Similarity=0.012 Sum_probs=37.3
Q ss_pred CcHHHHHhh-ceEEEEecCCCccHHHHHHHHH---------HHHhhc----cCcceEEEEcC-CcchHHHHHHHHHcC
Q 045172 64 GFADELKRA-WFWVRMVLVKPQDADVLLRNYM---------VAMVDK----RRFGCLVVVSD-DSDFVEVFQEATLRW 126 (157)
Q Consensus 64 gla~eLrRA-Gv~V~~V~dkpqAAD~AL~~~~---------~~~~~~----r~v~clvLVSD-DsDF~~~lr~Arer~ 126 (157)
.++..|.+. |+.|..+...|+..+.+..... .+.+.. .++|++++.+. +.....++..++..+
T Consensus 53 ~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 53 GAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp HHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 367888888 9988888777765544321110 011111 35677777544 444556677788866
No 202
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=62.37 E-value=47 Score=24.97 Aligned_cols=78 Identities=9% Similarity=0.032 Sum_probs=49.9
Q ss_pred HHHHHhhceEEEEec-CC-----------CccHHHHHHHHHHHHhhccCcceEEEEc----CCcchHHHHHHHHHcCCeE
Q 045172 66 ADELKRAWFWVRMVL-VK-----------PQDADVLLRNYMVAMVDKRRFGCLVVVS----DDSDFVEVFQEATLRWLKM 129 (157)
Q Consensus 66 a~eLrRAGv~V~~V~-dk-----------pqAAD~AL~~~~~~~~~~r~v~clvLVS----DDsDF~~~lr~Arer~l~t 129 (157)
...++++||.--.+. .. |...+.+-...+.+.+...|+.+.++-+ +..+|...++.|.+-|.++
T Consensus 28 l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~ 107 (262)
T 3p6l_A 28 LDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEF 107 (262)
T ss_dssp HHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSE
T ss_pred HHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCE
Confidence 345577788644433 22 1222334456666777788887666543 3567999999999999999
Q ss_pred EEEcCCCchHHHhhh
Q 045172 130 VVVGDMSDGALKRIA 144 (157)
Q Consensus 130 VVVGd~~~~~L~r~A 144 (157)
|++.-+ ...+.+.+
T Consensus 108 v~~~~~-~~~~~~l~ 121 (262)
T 3p6l_A 108 ITCEPA-LSDWDLVE 121 (262)
T ss_dssp EEECCC-GGGHHHHH
T ss_pred EEecCC-HHHHHHHH
Confidence 999754 23444433
No 203
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=62.33 E-value=27 Score=24.69 Aligned_cols=62 Identities=18% Similarity=-0.044 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC--CchHHHhh-hhccc-chhhh
Q 045172 88 VLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM--SDGALKRI-ANAFF-SWSDL 153 (157)
Q Consensus 88 ~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~--~~~~L~r~-AD~~f-sW~ev 153 (157)
-.....+.+.+ ....+-++.|.|.. .=+..|++.|+++|.|..+ ....+... ||.-+ +..|+
T Consensus 150 ~~~~~~~~~~l-~~~~~~~i~iGD~~---~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el 215 (233)
T 3s6j_A 150 PDLFLAAAKKI-GAPIDECLVIGDAI---WDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDL 215 (233)
T ss_dssp THHHHHHHHHT-TCCGGGEEEEESSH---HHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHH
T ss_pred hHHHHHHHHHh-CCCHHHEEEEeCCH---HhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHH
Confidence 45566666666 34445566776665 4466789999999999553 44666664 77655 44444
No 204
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=62.05 E-value=25 Score=24.40 Aligned_cols=21 Identities=14% Similarity=0.101 Sum_probs=16.7
Q ss_pred CcHHHHHhhceEEEEecCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq 84 (157)
.+-..|+..|+.+-.++..|.
T Consensus 89 ~~l~~l~~~g~~~~i~s~~~~ 109 (219)
T 3kd3_A 89 ELVQDLKNKGFEIWIFSGGLS 109 (219)
T ss_dssp HHHHHHHHTTCEEEEEEEEEH
T ss_pred HHHHHHHHCCCeEEEEcCCcH
Confidence 345678889999999988775
No 205
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=62.04 E-value=21 Score=30.21 Aligned_cols=72 Identities=13% Similarity=0.103 Sum_probs=39.8
Q ss_pred cHHHHHhhceEEEEecCCCccH-----HHHHHHHHHHHhhccCcce-EEEEcCCcch----HHHHHHHHH-cC----C--
Q 045172 65 FADELKRAWFWVRMVLVKPQDA-----DVLLRNYMVAMVDKRRFGC-LVVVSDDSDF----VEVFQEATL-RW----L-- 127 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAA-----D~AL~~~~~~~~~~r~v~c-lvLVSDDsDF----~~~lr~Are-r~----l-- 127 (157)
+-.+|+.+|+.+-.|+.++.-+ ...+...+...+...|+.- .++.|++..+ .+++..|-+ -| +
T Consensus 95 ~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~ 174 (416)
T 3zvl_A 95 KLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISV 174 (416)
T ss_dssp HHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCCEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCG
T ss_pred HHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCH
Confidence 3467899999999999987311 1222233334444445332 2334554432 244444433 44 3
Q ss_pred -eEEEEcCCC
Q 045172 128 -KMVVVGDMS 136 (157)
Q Consensus 128 -~tVVVGd~~ 136 (157)
.+++|||..
T Consensus 175 ~~~l~VGDs~ 184 (416)
T 3zvl_A 175 EDSVFVGDAA 184 (416)
T ss_dssp GGCEEECSCS
T ss_pred HHeEEEECCC
Confidence 589999984
No 206
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=61.74 E-value=20 Score=27.61 Aligned_cols=68 Identities=15% Similarity=0.157 Sum_probs=46.1
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|.+|-+.|..|-.+...+.....++...+ ...+..+.++..|-+|...+-+.+.+- ++..+|-
T Consensus 41 IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~ 113 (271)
T 4iin_A 41 IGAEIAKTLASMGLKVWINYRSNAEVADALKNEL----EEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVN 113 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH----HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH----HhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3577899999999999887665543333333333 345677888888888877766655542 6776664
No 207
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=61.70 E-value=33 Score=26.19 Aligned_cols=71 Identities=10% Similarity=-0.036 Sum_probs=49.3
Q ss_pred CCcHHHHHhhceE-EEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC-------------------C--------cc
Q 045172 63 YGFADELKRAWFW-VRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD-------------------D--------SD 114 (157)
Q Consensus 63 ygla~eLrRAGv~-V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD-------------------D--------sD 114 (157)
-.....++.+||. |......|...|..-...+.+.+...|+.+.++.+. | ..
T Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~ 103 (290)
T 3tva_A 24 GVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAE 103 (290)
T ss_dssp SBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHH
Confidence 3456778888985 444444444344455667777778899988887531 2 24
Q ss_pred hHHHHHHHHHcCCeEEEEc
Q 045172 115 FVEVFQEATLRWLKMVVVG 133 (157)
Q Consensus 115 F~~~lr~Arer~l~tVVVG 133 (157)
|...++.|.+-|.++|++.
T Consensus 104 ~~~~i~~a~~lG~~~v~~~ 122 (290)
T 3tva_A 104 MKEISDFASWVGCPAIGLH 122 (290)
T ss_dssp HHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEc
Confidence 6788999999999999983
No 208
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=61.66 E-value=26 Score=23.53 Aligned_cols=68 Identities=22% Similarity=0.134 Sum_probs=49.0
Q ss_pred HHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc---hHHHHHHHHHcCCeEEEEcCCCchHHHhh
Q 045172 67 DELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD---FVEVFQEATLRWLKMVVVGDMSDGALKRI 143 (157)
Q Consensus 67 ~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD---F~~~lr~Arer~l~tVVVGd~~~~~L~r~ 143 (157)
..++|||-.+.= .++...++ .+|--.||+++.|.+ -..+...+.+.++..+.+++. ..|+++
T Consensus 4 ~~~~kagk~~~G------------~~~v~kai-~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk--~eLG~a 68 (82)
T 3v7e_A 4 DKVSQAKSIIIG------------TKQTVKAL-KRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESM--KKLGKA 68 (82)
T ss_dssp HHHHHCSEEEES------------HHHHHHHH-TTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCH--HHHHHH
T ss_pred HHHHHcCCeeEc------------HHHHHHHH-HcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCH--HHHHHH
Confidence 456777744432 24566777 678889999998887 445566678899999999954 789988
Q ss_pred hhcccc
Q 045172 144 ANAFFS 149 (157)
Q Consensus 144 AD~~fs 149 (157)
+-..++
T Consensus 69 ~Gk~~~ 74 (82)
T 3v7e_A 69 CGIEVG 74 (82)
T ss_dssp HTCSSC
T ss_pred hCCCCC
Confidence 866554
No 209
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=61.08 E-value=9.2 Score=28.70 Aligned_cols=43 Identities=19% Similarity=0.288 Sum_probs=30.9
Q ss_pred ceEEEEcCCc-----chHHHHHHHHHcCCeEEEEcCCC------------chHHHhhhhc
Q 045172 104 GCLVVVSDDS-----DFVEVFQEATLRWLKMVVVGDMS------------DGALKRIANA 146 (157)
Q Consensus 104 ~clvLVSDDs-----DF~~~lr~Arer~l~tVVVGd~~------------~~~L~r~AD~ 146 (157)
..+||+||-. +...+++.+++.|++.++||-+. ...|...|..
T Consensus 126 ~~iillTDG~~~~~~~~~~~~~~~~~~gi~v~~igvG~~~~~~~~~~~~~~~~L~~iA~~ 185 (223)
T 2b2x_A 126 KVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAILGHYNRGNLSTEKFVEEIKSIASE 185 (223)
T ss_dssp EEEEEEESSCCTTGGGHHHHHHHHHTTTEEEEEEEECGGGC---CCCHHHHHHHHTTSCS
T ss_pred eEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEecCccccccccchhHHHHHHHHhCC
Confidence 5789999732 36778899999999888777542 1466666654
No 210
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=60.85 E-value=8.6 Score=27.41 Aligned_cols=22 Identities=9% Similarity=0.144 Sum_probs=16.6
Q ss_pred CCcHHHHHhhceEEEEecCCCc
Q 045172 63 YGFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpq 84 (157)
..+-.+|+..|+.+-.++..+.
T Consensus 76 ~~~l~~l~~~g~~~~i~s~~~~ 97 (205)
T 3m9l_A 76 VELVRELAGRGYRLGILTRNAR 97 (205)
T ss_dssp HHHHHHHHHTTCEEEEECSSCH
T ss_pred HHHHHHHHhcCCeEEEEeCCch
Confidence 3455678888888888888765
No 211
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=60.84 E-value=6 Score=32.02 Aligned_cols=65 Identities=9% Similarity=-0.100 Sum_probs=43.1
Q ss_pred HHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeE----EEEcCC
Q 045172 66 ADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKM----VVVGDM 135 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~t----VVVGd~ 135 (157)
..+|++.|+-|-....-|. |.. ..+..+. ..+.+.|++.+...+...+++.|++.|+.. .+.+|.
T Consensus 175 ~~~~~~~g~~v~~~~~~~~--d~~--~~l~~i~-~~~~~vii~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~~~ 243 (433)
T 4f11_A 175 TGVLYGEDIEISDTESFSN--DPC--TSVKKLK-GNDVRIILGQFDQNMAAKVFCCAYEENMYGSKYQWIIPGW 243 (433)
T ss_dssp HHHSSSSSCEEEEEEEESS--CCH--HHHHHHH-HTTCCEEEEECCHHHHHHHHHHHHHTTCCSTTCEEEEESC
T ss_pred HHHHHHcCceEEEEeccCc--CHH--HHHHHHh-hCCCeEEEEeCcHHHHHHHHHHHHHcCCCCCCeEEEEcCc
Confidence 3456667776654332232 221 2223333 578999999999999999999999999975 444454
No 212
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=60.83 E-value=12 Score=35.95 Aligned_cols=37 Identities=16% Similarity=0.080 Sum_probs=29.2
Q ss_pred chHHHHHHHHHcCCeEEEEcCC-CchHHHhhhhcccch
Q 045172 114 DFVEVFQEATLRWLKMVVVGDM-SDGALKRIANAFFSW 150 (157)
Q Consensus 114 DF~~~lr~Arer~l~tVVVGd~-~~~~L~r~AD~~fsW 150 (157)
+=..+++..+++|-.+..+||+ +|-.--+.||+.+.-
T Consensus 614 ~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAm 651 (920)
T 1mhs_A 614 HKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAV 651 (920)
T ss_dssp HHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccc
Confidence 4466788888899999999999 775556678888754
No 213
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=60.17 E-value=20 Score=28.75 Aligned_cols=51 Identities=20% Similarity=0.195 Sum_probs=43.5
Q ss_pred cHHHHHHHHHHHHhhccCcceEEEEcCCcc----hHHHHHHHHHcCCeEEEEcCC
Q 045172 85 DADVLLRNYMVAMVDKRRFGCLVVVSDDSD----FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 85 AAD~AL~~~~~~~~~~r~v~clvLVSDDsD----F~~~lr~Arer~l~tVVVGd~ 135 (157)
.-|+-..+.+.+.++..||++=+-|.+-.. ..++++.|.++|++.++.|=+
T Consensus 32 ~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG 86 (181)
T 4b4k_A 32 TSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAG 86 (181)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEC
T ss_pred HhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEecc
Confidence 689999999999999999999888877776 556667777899999998876
No 214
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=59.86 E-value=15 Score=28.80 Aligned_cols=28 Identities=18% Similarity=0.026 Sum_probs=21.3
Q ss_pred hcCcccC-CCcHHHHHhhceEEEEecCCC
Q 045172 56 ILTPKVG-YGFADELKRAWFWVRMVLVKP 83 (157)
Q Consensus 56 ~l~pkvg-ygla~eLrRAGv~V~~V~dkp 83 (157)
-+.++-| -.+-..|+++|+.|.++++.-
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~ 167 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGI 167 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCc
Confidence 3555555 456788999999999998764
No 215
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=59.80 E-value=22 Score=25.43 Aligned_cols=21 Identities=10% Similarity=0.026 Sum_probs=16.4
Q ss_pred CcHHHHHhhceEEEEecCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq 84 (157)
.+-.+|+..|+.+-.++..+.
T Consensus 99 ~~l~~l~~~g~~~~i~t~~~~ 119 (233)
T 3nas_A 99 RLLCQLKNENIKIGLASSSRN 119 (233)
T ss_dssp HHHHHHHHTTCEEEECCSCTT
T ss_pred HHHHHHHHCCCcEEEEcCchh
Confidence 355678888999998888766
No 216
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=59.62 E-value=1.3 Score=34.07 Aligned_cols=76 Identities=13% Similarity=0.045 Sum_probs=44.0
Q ss_pred CCcHHHHHhhceEEEEec---CCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH------cCCeEEEEc
Q 045172 63 YGFADELKRAWFWVRMVL---VKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL------RWLKMVVVG 133 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~---dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are------r~l~tVVVG 133 (157)
..|+..|+.+|+.|..++ -.|...+. ..+.+.+....+|+++ +++-|-...+++.+.+ .+.+.++||
T Consensus 133 ~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~---~~~~~~l~~~~~d~v~-ftS~s~v~~~~~~~~~~~~~~l~~~~~~aiG 208 (240)
T 3mw8_A 133 EAMADGLRLRGANVSYLEVYQRACPPLDA---PASVSRWQSFGIDTIV-VTSGEVLENLINLVPKDSFAWLRDCHIIVPS 208 (240)
T ss_dssp CHHHHHHHHTTCEEEEEEEEEEECCCCCH---HHHHHHHHHHTCCEEE-CCSHHHHHHHHHHSCGGGHHHHHHSEEEESS
T ss_pred HHHHHHHHHCCCEEEEEEEEEeeCCCCCH---HHHHHHHHhCCCCEEE-EcCHHHHHHHHHHcchHHHHHHhCCCEEEEC
Confidence 448999999999887662 12221111 1122233345788764 5566666666665432 356778888
Q ss_pred CCCchHHHh
Q 045172 134 DMSDGALKR 142 (157)
Q Consensus 134 d~~~~~L~r 142 (157)
..+-.++..
T Consensus 209 ~~ta~~l~~ 217 (240)
T 3mw8_A 209 ARVETQARK 217 (240)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 775445443
No 217
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=59.58 E-value=33 Score=24.42 Aligned_cols=49 Identities=8% Similarity=-0.047 Sum_probs=32.9
Q ss_pred HHHHHHhhccCcc-eEEEEcCCcchHHHHHHHHHcCCeEEEEcCCCchHH
Q 045172 92 NYMVAMVDKRRFG-CLVVVSDDSDFVEVFQEATLRWLKMVVVGDMSDGAL 140 (157)
Q Consensus 92 ~~~~~~~~~r~v~-clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~~~~L 140 (157)
..+.+.+...|++ +-+.|-..+-...+++.|++.+...||+|-...+.+
T Consensus 84 ~~~~~~~~~~gv~~v~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~~~~ 133 (163)
T 1tq8_A 84 HDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTI 133 (163)
T ss_dssp HHHHHHHHTTTCCEEEEEEECSSHHHHHHHHHHHTTCSEEEEECCCCCSH
T ss_pred HHHHHHHHHcCCCeEEEEEecCCHHHHHHHHHHhcCCCEEEECCCCCCcc
Confidence 3444455456776 443343444578899999999999999998743333
No 218
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=59.46 E-value=10 Score=32.00 Aligned_cols=60 Identities=8% Similarity=0.092 Sum_probs=41.1
Q ss_pred eEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeE-EEEcCC
Q 045172 74 FWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKM-VVVGDM 135 (157)
Q Consensus 74 v~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~t-VVVGd~ 135 (157)
+.|-.++..+.+.+.|+ .+.+.|-+.|+.+-+...++..+..-++.|...|... ||||+.
T Consensus 367 ~~v~v~~~~~~~~~~a~--~l~~~Lr~~Gi~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~~ 427 (464)
T 4g84_A 367 TQVLVASAQKKLLEERL--KLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQ 427 (464)
T ss_dssp CCEEEECSSSSCHHHHH--HHHHHHHHTTCCEECCSCSSCCHHHHHHHHHHHTCCEEEECCHH
T ss_pred ceEEEEeCCHHHHHHHH--HHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECch
Confidence 34555666666656554 3455565788888665555667999999999999875 566764
No 219
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=59.39 E-value=12 Score=33.68 Aligned_cols=47 Identities=15% Similarity=0.291 Sum_probs=37.7
Q ss_pred CcceEEEEcCCc------chHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccc
Q 045172 102 RFGCLVVVSDDS------DFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 102 ~v~clvLVSDDs------DF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
..+||+++..|. .+..-++.|+++|.+.|||.=. .......||.|++
T Consensus 160 ~ad~il~~G~n~~~~~p~~~~~~l~~a~~~G~klividPr-~t~ta~~Ad~~l~ 212 (727)
T 2e7z_A 160 DSNCLLFIGKNLSNHNWVSQFNDLKAALKRGCKLIVLDPR-RTKVAEMADIWLP 212 (727)
T ss_dssp TCSEEEEESCCCBTTBSHHHHHHHHHHHHHTCEEEEECSS-CCHHHHHCSEEEC
T ss_pred cCCEEEEECCChhhcCCHHHHHHHHHHHHCCCeEEEECCC-CCcchhhcceeec
Confidence 459999998773 6778889999999999999755 3467778999883
No 220
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=59.20 E-value=33 Score=24.15 Aligned_cols=45 Identities=16% Similarity=0.149 Sum_probs=30.4
Q ss_pred CcceEEEEcCCc---c----hHHHHHHHHHcCCeEEEEcC--CCchHHHhhhhc
Q 045172 102 RFGCLVVVSDDS---D----FVEVFQEATLRWLKMVVVGD--MSDGALKRIANA 146 (157)
Q Consensus 102 ~v~clvLVSDDs---D----F~~~lr~Arer~l~tVVVGd--~~~~~L~r~AD~ 146 (157)
.-..++|+||-. + .....+.+++.|+..++||- .....|...|+.
T Consensus 103 ~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg~~~~~~L~~ia~~ 156 (182)
T 1shu_X 103 TSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADS 156 (182)
T ss_dssp SCEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECSSCCHHHHHHHSSS
T ss_pred CCeEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCCcCCHHHHHHHhCC
Confidence 347899999843 2 24467888899988766654 455667777653
No 221
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=59.19 E-value=28 Score=22.77 Aligned_cols=63 Identities=10% Similarity=0.020 Sum_probs=36.6
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC-------CcchHHHHHHHHHc--CCeEEEEcC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD-------DSDFVEVFQEATLR--WLKMVVVGD 134 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD-------DsDF~~~lr~Arer--~l~tVVVGd 134 (157)
.|...|.+.|+.|.++.+..+ +.+.+.....|++++=.+ +.+=.++++..++. ++..|++++
T Consensus 18 ~l~~~L~~~g~~v~~~~~~~~---------a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~ 88 (140)
T 2qr3_A 18 AVQLLLKNHFSKVITLSSPVS---------LSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTA 88 (140)
T ss_dssp HHHHHHTTTSSEEEEECCHHH---------HHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHHhCCcEEEEeCCHHH---------HHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEEC
Confidence 456677778888876554322 222333445666555432 33445677777763 677888876
Q ss_pred C
Q 045172 135 M 135 (157)
Q Consensus 135 ~ 135 (157)
.
T Consensus 89 ~ 89 (140)
T 2qr3_A 89 Y 89 (140)
T ss_dssp G
T ss_pred C
Confidence 5
No 222
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=59.15 E-value=29 Score=21.46 Aligned_cols=76 Identities=14% Similarity=0.058 Sum_probs=45.7
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc----CCeEEEEcCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR----WLKMVVVGDMSD 137 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer----~l~tVVVGd~~~ 137 (157)
.+...|.+.|+.|..+.+..+ + .+.+.....+++++=.+ +.+-.++++..++. +...+++++..+
T Consensus 16 ~l~~~l~~~g~~v~~~~~~~~----~-----~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~~ 86 (119)
T 2j48_A 16 VVCEMLTAAGFKVIWLVDGST----A-----LDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEPP 86 (119)
T ss_dssp HHHHHHHHTTCEEEEESCHHH----H-----HHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSCC
T ss_pred HHHHHHHhCCcEEEEecCHHH----H-----HHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCCC
Confidence 356778888998887654322 2 22233345676665433 33455778888874 577888877632
Q ss_pred --hHHHhhhhccc
Q 045172 138 --GALKRIANAFF 148 (157)
Q Consensus 138 --~~L~r~AD~~f 148 (157)
.++...++-++
T Consensus 87 ~~~~~~~g~~~~l 99 (119)
T 2j48_A 87 VDPLLTAQASAIL 99 (119)
T ss_dssp SSHHHHHHCSEEC
T ss_pred chhhhhcCHHHhc
Confidence 44555555554
No 223
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=59.13 E-value=27 Score=24.01 Aligned_cols=21 Identities=10% Similarity=0.060 Sum_probs=15.6
Q ss_pred CcHHHHHhhceEEEEecCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq 84 (157)
.+-.+|+..|+.+-.++..+.
T Consensus 96 ~~l~~l~~~g~~~~i~s~~~~ 116 (214)
T 3e58_A 96 KVLNEVKSQGLEIGLASSSVK 116 (214)
T ss_dssp HHHHHHHHTTCEEEEEESSCH
T ss_pred HHHHHHHHCCCCEEEEeCCcH
Confidence 344677888888888887765
No 224
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=58.65 E-value=18 Score=25.84 Aligned_cols=21 Identities=5% Similarity=-0.050 Sum_probs=15.2
Q ss_pred CcHHHHHhhceEEEEecCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq 84 (157)
.+-..|+..|+.+-.++..|.
T Consensus 106 ~~l~~l~~~g~~~~i~t~~~~ 126 (233)
T 3umb_A 106 PVLRQLREMGLPLGILSNGNP 126 (233)
T ss_dssp HHHHHHHTTTCCEEEEESSCH
T ss_pred HHHHHHHhCCCcEEEEeCCCH
Confidence 345677788888888887765
No 225
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=58.40 E-value=28 Score=27.26 Aligned_cols=58 Identities=16% Similarity=0.103 Sum_probs=44.8
Q ss_pred HHHHHHhhccCcceEEEEcCCcch----HHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccchh
Q 045172 92 NYMVAMVDKRRFGCLVVVSDDSDF----VEVFQEATLRWLKMVVVGDMSDGALKRIANAFFSWS 151 (157)
Q Consensus 92 ~~~~~~~~~r~v~clvLVSDDsDF----~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fsW~ 151 (157)
..+.+.+ ..|-+..+|+|-|+-| ..+++.++++|+.+.||-..| ....-.|-+.+||.
T Consensus 87 ~~i~~~~-~~g~~Va~l~~GDP~~~~~~~~l~~~l~~~gi~v~viPGiS-s~~aa~a~~G~pl~ 148 (259)
T 2e0n_A 87 ASMAEEV-QAGRRVAVVSVGDGGFYSTASAIIERARRDGLDCSMTPGIP-AFIAAGSAAGMPLA 148 (259)
T ss_dssp HHHHHHH-HTTCEEEEEESBCTTBSCTHHHHHHHHHTTTCCEEEECCCC-HHHHHHHHTTCCSB
T ss_pred HHHHHHH-HCCCeEEEEeCCCCcccccHHHHHHHHHHCCCCEEEeCChh-HHHHHHHhcCCCCc
Confidence 3445555 4677899999999876 578899999999999998875 55666778888883
No 226
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=58.25 E-value=38 Score=22.52 Aligned_cols=77 Identities=14% Similarity=0.070 Sum_probs=47.4
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhc-cCcceEEEEcC---CcchHHHHHHHHH-cCCeEEEEcCCCc
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDK-RRFGCLVVVSD---DSDFVEVFQEATL-RWLKMVVVGDMSD 137 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~-r~v~clvLVSD---DsDF~~~lr~Are-r~l~tVVVGd~~~ 137 (157)
.+|...|.+.|+.|.++++..+| .+.+.. ...|.+++=.+ +.+-.++++..++ .+...|++.+..+
T Consensus 19 ~~l~~~L~~~g~~v~~~~~~~~a---------~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 89 (140)
T 3h5i_A 19 KTIANILNKYGYTVEIALTGEAA---------VEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTE 89 (140)
T ss_dssp HHHHHHHHHTTCEEEEESSHHHH---------HHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSS
T ss_pred HHHHHHHHHcCCEEEEecChHHH---------HHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCCC
Confidence 35677888899999886654332 223323 46676665432 3556677777776 5788888887632
Q ss_pred -----hHHHhhhhccc
Q 045172 138 -----GALKRIANAFF 148 (157)
Q Consensus 138 -----~~L~r~AD~~f 148 (157)
.++...|+-++
T Consensus 90 ~~~~~~~~~~g~~~~l 105 (140)
T 3h5i_A 90 PAVVEKIRSVTAYGYV 105 (140)
T ss_dssp CCCCGGGGGSCEEEEE
T ss_pred HHHHHHHHhCCCcEEE
Confidence 34444555555
No 227
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=58.05 E-value=22 Score=26.73 Aligned_cols=63 Identities=16% Similarity=0.226 Sum_probs=51.4
Q ss_pred CcHHHHHh-hceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC-------CcchHHHHHHHHHcCCeEE
Q 045172 64 GFADELKR-AWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD-------DSDFVEVFQEATLRWLKMV 130 (157)
Q Consensus 64 gla~eLrR-AGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD-------DsDF~~~lr~Arer~l~tV 130 (157)
|=+.-|++ +|+.|..|...|.--| -++.+++.+..|+.++-..| +.|=-.+.|.|-+.++-.+
T Consensus 39 gTa~~L~e~~Gl~v~~v~k~~~eG~----p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~ 109 (134)
T 2xw6_A 39 TTGRRIEEATGLTVEKLLSGPLGGD----QQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLA 109 (134)
T ss_dssp HHHHHHHHHHCCCCEECSCGGGTHH----HHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHhhCceEEEEEecCCCCc----chHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeE
Confidence 45788999 9999999987673333 37899998999999999998 6788889999999887654
No 228
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=57.92 E-value=29 Score=27.13 Aligned_cols=43 Identities=16% Similarity=0.149 Sum_probs=30.8
Q ss_pred ceEEEEcCCc-----chHHHHHHHHHcCCeEEEEcCC---CchHHHhhhhc
Q 045172 104 GCLVVVSDDS-----DFVEVFQEATLRWLKMVVVGDM---SDGALKRIANA 146 (157)
Q Consensus 104 ~clvLVSDDs-----DF~~~lr~Arer~l~tVVVGd~---~~~~L~r~AD~ 146 (157)
..|||+||-. +....++.+++.|+..++||-+ ....|...|+.
T Consensus 130 ~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~~~~~~~L~~iA~~ 180 (281)
T 4hqf_A 130 QLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVGC 180 (281)
T ss_dssp EEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESSSCCHHHHHHHTTS
T ss_pred EEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCCccCHHHHHhhhCC
Confidence 5699999843 5778888999999887766644 23456777754
No 229
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=57.61 E-value=42 Score=22.81 Aligned_cols=75 Identities=9% Similarity=-0.055 Sum_probs=39.1
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcc---eEEEEcCC-----cchHHHHHHHHHcCCe---EEEE
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFG---CLVVVSDD-----SDFVEVFQEATLRWLK---MVVV 132 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~---clvLVSDD-----sDF~~~lr~Arer~l~---tVVV 132 (157)
.+-..|+..|+.+-.++..+...- . ..+.+ +++ ..++.|++ ++-..+...+..-|+. ++.|
T Consensus 92 ~~l~~l~~~g~~~~i~s~~~~~~~----~-~~~~~---~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~i 163 (207)
T 2go7_A 92 EVLAWADESGIQQFIYTHKGNNAF----T-ILKDL---GVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYI 163 (207)
T ss_dssp HHHHHHHHTTCEEEEECSSCTHHH----H-HHHHH---TCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred HHHHHHHHCCCeEEEEeCCchHHH----H-HHHHc---CchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEEEE
Confidence 345667888999888888776221 1 22222 221 23334443 2223333444445554 8899
Q ss_pred cCC-CchHHHhhhhc
Q 045172 133 GDM-SDGALKRIANA 146 (157)
Q Consensus 133 Gd~-~~~~L~r~AD~ 146 (157)
||+ +|-...+.|..
T Consensus 164 GD~~nDi~~~~~aG~ 178 (207)
T 2go7_A 164 GDRTLDVEFAQNSGI 178 (207)
T ss_dssp ESSHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHCCC
Confidence 998 43334444443
No 230
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=57.61 E-value=12 Score=31.24 Aligned_cols=72 Identities=14% Similarity=-0.030 Sum_probs=46.2
Q ss_pred HHHh-hceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC---CcchHHHHHHHHHc--CCeEEEEcCCCchHHH
Q 045172 68 ELKR-AWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD---DSDFVEVFQEATLR--WLKMVVVGDMSDGALK 141 (157)
Q Consensus 68 eLrR-AGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD---DsDF~~~lr~Arer--~l~tVVVGd~~~~~L~ 141 (157)
-|.+ .|+.|..+++ .|. +. .-...+....=+.++.+|- ..|-...++.|+++ |.+|+.|-+..++.|.
T Consensus 74 ~l~~~~g~~v~~~~~----~~~-~~-~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~~~ga~~iaIT~~~~S~La 147 (384)
T 3c3j_A 74 WLASHTGKNFSAVPT----TDL-VT-NPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALY 147 (384)
T ss_dssp HHHHHHCSEEEECCH----HHH-HH-CHHHHCCTTSCEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHH
T ss_pred HHHHHhCCcEEEecc----HHH-Hh-ChhhhhCCCCCeEEEEEeCCcCCHHHHHHHHHHHhhCCCCCEEEEECCCCCHHH
Confidence 4555 7998888653 121 11 1111111112355666664 34567788999999 9999999988678999
Q ss_pred hhhh
Q 045172 142 RIAN 145 (157)
Q Consensus 142 r~AD 145 (157)
+.||
T Consensus 148 ~~ad 151 (384)
T 3c3j_A 148 QNAI 151 (384)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 9999
No 231
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=57.35 E-value=8.2 Score=28.49 Aligned_cols=22 Identities=9% Similarity=-0.173 Sum_probs=16.5
Q ss_pred CCcHHHHHhhceEEEEecCCCc
Q 045172 63 YGFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpq 84 (157)
..+-.+|+..|+.+-.++..+.
T Consensus 116 ~~~l~~l~~~g~~~~i~s~~~~ 137 (259)
T 4eek_A 116 AETLRALRAAGVPFAIGSNSER 137 (259)
T ss_dssp HHHHHHHHHHTCCEEEECSSCH
T ss_pred HHHHHHHHHCCCeEEEEeCCCH
Confidence 3455667888998888888775
No 232
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=57.04 E-value=13 Score=33.30 Aligned_cols=45 Identities=11% Similarity=0.158 Sum_probs=36.0
Q ss_pred ceEEEEcC---CcchHHHHHHHHHcC-CeEEEEcCCCchHHHhhhhccc
Q 045172 104 GCLVVVSD---DSDFVEVFQEATLRW-LKMVVVGDMSDGALKRIANAFF 148 (157)
Q Consensus 104 ~clvLVSD---DsDF~~~lr~Arer~-l~tVVVGd~~~~~L~r~AD~~f 148 (157)
++++.+|- ..|-..+++.|+++| .+|+.|-+..+..|.+.||.-+
T Consensus 341 dlvI~iS~SG~T~e~l~a~~~ak~~G~a~~IaIT~~~~S~La~~ad~~l 389 (608)
T 2bpl_A 341 SLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLAL 389 (608)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCSEEEEEESSTTCHHHHHSSEEE
T ss_pred CEEEEEeCCcCCHHHHHHHHHHHHcCCCeEEEEECCCCCHHHHhcCEEE
Confidence 55666664 346677889999999 9999998876689999999765
No 233
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=57.04 E-value=6.9 Score=27.19 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=40.1
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCc----ceEEEEcCCc-----chHHHHHHHHHcCC-eEEEEcC
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRF----GCLVVVSDDS-----DFVEVFQEATLRWL-KMVVVGD 134 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v----~clvLVSDDs-----DF~~~lr~Arer~l-~tVVVGd 134 (157)
+-.+|+..|+.+-.++..|..++. .++ ..++ +. +..|++. +=..+...+.+-|+ .+++|||
T Consensus 90 ~l~~l~~~g~~~~i~t~~~~~~~~-----~l~---~~~~~~~f~~-~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~iGD 160 (190)
T 2fi1_A 90 LLEDISNQGGRHFLVSHRNDQVLE-----ILE---KTSIAAYFTE-VVTSSSGFKRKPNPESMLYLREKYQISSGLVIGD 160 (190)
T ss_dssp HHHHHHHTTCEEEEECSSCTHHHH-----HHH---HTTCGGGEEE-EECGGGCCCCTTSCHHHHHHHHHTTCSSEEEEES
T ss_pred HHHHHHHCCCcEEEEECCcHHHHH-----HHH---HcCCHhheee-eeeccccCCCCCCHHHHHHHHHHcCCCeEEEEcC
Confidence 445678889999999988753322 222 2233 22 3333322 22334444555566 7999999
Q ss_pred C-CchHHHhhhh
Q 045172 135 M-SDGALKRIAN 145 (157)
Q Consensus 135 ~-~~~~L~r~AD 145 (157)
+ +|-...+.|.
T Consensus 161 ~~~Di~~a~~aG 172 (190)
T 2fi1_A 161 RPIDIEAGQAAG 172 (190)
T ss_dssp SHHHHHHHHHTT
T ss_pred CHHHHHHHHHcC
Confidence 9 4333344444
No 234
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=57.03 E-value=12 Score=33.57 Aligned_cols=47 Identities=15% Similarity=0.080 Sum_probs=37.2
Q ss_pred CcceEEEEcCCc-----chHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccc
Q 045172 102 RFGCLVVVSDDS-----DFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 102 ~v~clvLVSDDs-----DF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
..+||+++..|. .+..-++.|+++|.+.|||.-. .......||.|++
T Consensus 166 ~ad~il~~G~n~~~~~p~~~~~l~~a~~~G~klividPr-~t~ta~~Ad~~l~ 217 (715)
T 2iv2_X 166 NTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPR-KIETARIADMHIA 217 (715)
T ss_dssp GCSEEEEESCCHHHHCHHHHHHHHHHHHTTCEEEEECSS-CCHHHHTCSEEEC
T ss_pred cCCEEEEEcCChHHhCHHHHHHHHHHHHCCCeEEEEcCC-CCchhHhhCEEec
Confidence 569999998773 4556788999999999999765 3467788999885
No 235
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=56.69 E-value=3.7 Score=29.93 Aligned_cols=68 Identities=13% Similarity=-0.003 Sum_probs=39.6
Q ss_pred ccCCCcHHHHHhhceEEEEecCC----------------CccHHHHH--------HHHHHHHhhccCcceEEEEcCCcch
Q 045172 60 KVGYGFADELKRAWFWVRMVLVK----------------PQDADVLL--------RNYMVAMVDKRRFGCLVVVSDDSDF 115 (157)
Q Consensus 60 kvgygla~eLrRAGv~V~~V~dk----------------pqAAD~AL--------~~~~~~~~~~r~v~clvLVSDDsDF 115 (157)
+.||-+...|.+.||.|-.|-.+ |. .|.+. ..-+-+.. ..|+..++ +|.-..=
T Consensus 18 ~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~-vDlavi~~p~~~v~~~v~e~~-~~g~k~v~-~~~G~~~ 94 (122)
T 3ff4_A 18 RYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEG-VDTVTLYINPQNQLSEYNYIL-SLKPKRVI-FNPGTEN 94 (122)
T ss_dssp SHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTT-CCEEEECSCHHHHGGGHHHHH-HHCCSEEE-ECTTCCC
T ss_pred CHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCC-CCEEEEEeCHHHHHHHHHHHH-hcCCCEEE-ECCCCCh
Confidence 45666777788888866666333 22 33322 22233344 57777654 4544333
Q ss_pred HHHHHHHHHcCCeEE
Q 045172 116 VEVFQEATLRWLKMV 130 (157)
Q Consensus 116 ~~~lr~Arer~l~tV 130 (157)
.++.+.||+.|++.+
T Consensus 95 ~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 95 EELEEILSENGIEPV 109 (122)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCeEE
Confidence 678888888888744
No 236
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=56.64 E-value=18 Score=24.42 Aligned_cols=47 Identities=13% Similarity=0.049 Sum_probs=33.0
Q ss_pred HHHHHHHHhhccCcce---EEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 90 LRNYMVAMVDKRRFGC---LVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 90 L~~~~~~~~~~r~v~c---lvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
....+.+.+...|+++ -..+...+--..+++.|++.+...||+|-..
T Consensus 71 ~l~~~~~~~~~~g~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~ 120 (147)
T 3hgm_A 71 IAVQAKTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQG 120 (147)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHHhcCCCccceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCC
Confidence 3344555555678766 3444444567889999999999999999763
No 237
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=56.37 E-value=38 Score=24.42 Aligned_cols=20 Identities=10% Similarity=0.062 Sum_probs=12.5
Q ss_pred cHHHHHhhceEEEEecCCCc
Q 045172 65 FADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpq 84 (157)
+-.+|+..|+.+-.++..|.
T Consensus 42 ~L~~L~~~g~~~~i~Tn~~~ 61 (189)
T 3ib6_A 42 TLEKVKQLGFKQAILSNTAT 61 (189)
T ss_dssp HHHHHHHTTCEEEEEECCSS
T ss_pred HHHHHHHCCCEEEEEECCCc
Confidence 34566667777777666654
No 238
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=56.33 E-value=54 Score=24.72 Aligned_cols=29 Identities=24% Similarity=0.048 Sum_probs=22.1
Q ss_pred cceEEEEcCC--cchHHHHHHHHHcCCeEEEEcCC
Q 045172 103 FGCLVVVSDD--SDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 103 v~clvLVSDD--sDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.+-.+.|.|+ +| +.-|+..|++||.|..+
T Consensus 202 ~~~~~~VGD~~~~D----i~~A~~aG~~~i~v~~g 232 (263)
T 1zjj_A 202 GEELWMVGDRLDTD----IAFAKKFGMKAIMVLTG 232 (263)
T ss_dssp TCEEEEEESCTTTH----HHHHHHTTCEEEEESSS
T ss_pred cccEEEECCChHHH----HHHHHHcCCeEEEECCC
Confidence 3556778886 45 67789999999999765
No 239
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=55.90 E-value=26 Score=25.82 Aligned_cols=19 Identities=21% Similarity=0.025 Sum_probs=13.5
Q ss_pred HHHHHhhceEEEEecCCCc
Q 045172 66 ADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpq 84 (157)
-.+|+..|+.+-.++..|.
T Consensus 65 L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 65 IATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp HHHHHHHTCCEEEEEECHH
T ss_pred HHHHHHCCCEEEEEcCcCC
Confidence 3457777888888877765
No 240
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=55.87 E-value=10 Score=32.32 Aligned_cols=48 Identities=13% Similarity=0.264 Sum_probs=35.8
Q ss_pred ccCcceEEEEcCCcc---h-HHHHHHHHHcC--CeEEEEcCCCchHHHhhhhcc
Q 045172 100 KRRFGCLVVVSDDSD---F-VEVFQEATLRW--LKMVVVGDMSDGALKRIANAF 147 (157)
Q Consensus 100 ~r~v~clvLVSDDsD---F-~~~lr~Arer~--l~tVVVGd~~~~~L~r~AD~~ 147 (157)
+.+...+++.|+|.- | ..++++.+.+| .++++|+|..+..+...+|..
T Consensus 279 d~~~pvi~~~~~d~~t~~~~~~~~~ev~arg~~~~vi~i~~~~~~~~~~~~~~~ 332 (393)
T 3odp_A 279 DDETLIVIFFSNDTYAREYEYDLLKEVYSQNGNHKVLAISEYEDKLIEDNSDYF 332 (393)
T ss_dssp CTTEEEEEECCSSHHHHHHHHHHHHHHHHSSSCCEEEEEEEECCHHHHTTCSEE
T ss_pred CCCceEEEEEcCCchhhHHHHHHHHHHHhcCCCceEEEEEcCCcchhccCCcEE
Confidence 345678888888863 4 35889999988 999999987555666666766
No 241
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=55.70 E-value=13 Score=31.06 Aligned_cols=79 Identities=9% Similarity=-0.053 Sum_probs=49.4
Q ss_pred cHHHHHhhc-eEEEEecCCCccHHH--HHHHHHHHHhhccCcceEEE--EcCCcch---HHHHHHHHHcCCeEEE-EcCC
Q 045172 65 FADELKRAW-FWVRMVLVKPQDADV--LLRNYMVAMVDKRRFGCLVV--VSDDSDF---VEVFQEATLRWLKMVV-VGDM 135 (157)
Q Consensus 65 la~eLrRAG-v~V~~V~dkpqAAD~--AL~~~~~~~~~~r~v~clvL--VSDDsDF---~~~lr~Arer~l~tVV-VGd~ 135 (157)
|..+|++-| =.|-.|.|+ ...+. -+...+.+.+...|+++.++ |..++++ ..+++.+++.+...|| ||.+
T Consensus 24 l~~~l~~~g~~~~livtd~-~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGG 102 (387)
T 3bfj_A 24 VGERCQLLGGKKALLVTDK-GLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGG 102 (387)
T ss_dssp HHHHHHHTTCSEEEEECCT-TTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESH
T ss_pred HHHHHHHcCCCEEEEEECc-chhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 345667666 456666774 33334 25777888887778887655 3444444 5567778888888777 8887
Q ss_pred CchHHHhhh
Q 045172 136 SDGALKRIA 144 (157)
Q Consensus 136 ~~~~L~r~A 144 (157)
+...+...+
T Consensus 103 sv~D~aK~i 111 (387)
T 3bfj_A 103 SPHDCGKGI 111 (387)
T ss_dssp HHHHHHHHH
T ss_pred chhhHHHHH
Confidence 544444443
No 242
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=55.65 E-value=14 Score=28.63 Aligned_cols=34 Identities=3% Similarity=0.117 Sum_probs=29.6
Q ss_pred cCcceEEEEcCCcc---hHHHHHHHHHcCCeEEEEcC
Q 045172 101 RRFGCLVVVSDDSD---FVEVFQEATLRWLKMVVVGD 134 (157)
Q Consensus 101 r~v~clvLVSDDsD---F~~~lr~Arer~l~tVVVGd 134 (157)
..-|+++++|.... =.++...|+++|+++|.|-.
T Consensus 76 ~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 76 HAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 45599999997665 77899999999999999998
No 243
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=55.51 E-value=17 Score=25.77 Aligned_cols=62 Identities=10% Similarity=-0.073 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhccc-chhhhh
Q 045172 88 VLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFF-SWSDLL 154 (157)
Q Consensus 88 ~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~f-sW~ev~ 154 (157)
-.....+.+.+ ....+-.+.|.|.. . =+..|+..|+++|.|+++. ..++..||.-+ |+.|+.
T Consensus 130 ~~~~~~~~~~~-g~~~~~~i~iGD~~--~-Di~~a~~aG~~~i~v~~~~-~~~~~~ad~v~~~~~el~ 192 (205)
T 3m9l_A 130 PGGLLKLAEAW-DVSPSRMVMVGDYR--F-DLDCGRAAGTRTVLVNLPD-NPWPELTDWHARDCAQLR 192 (205)
T ss_dssp SHHHHHHHHHT-TCCGGGEEEEESSH--H-HHHHHHHHTCEEEECSSSS-CSCGGGCSEECSSHHHHH
T ss_pred HHHHHHHHHHc-CCCHHHEEEECCCH--H-HHHHHHHcCCEEEEEeCCC-CcccccCCEEeCCHHHHH
Confidence 34455555555 33335556666643 3 4577899999999999984 45677788766 666654
No 244
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=55.39 E-value=39 Score=21.79 Aligned_cols=77 Identities=12% Similarity=0.173 Sum_probs=48.7
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc----CCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR----WLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer----~l~tVVVGd~~ 136 (157)
..|...|.+.|+.|.++++..+ +.+.+.....|++++=.+ +.+-.++++..|+. ++..+++.+..
T Consensus 17 ~~l~~~L~~~g~~v~~~~~~~~---------a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 87 (127)
T 3i42_A 17 ETFKELLEMLGFQADYVMSGTD---------ALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFA 87 (127)
T ss_dssp HHHHHHHHHTTEEEEEESSHHH---------HHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-
T ss_pred HHHHHHHHHcCCCEEEECCHHH---------HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCc
Confidence 3467788899998888664322 333344566777766443 45566788888875 56778887652
Q ss_pred c----hHHHhhhhccc
Q 045172 137 D----GALKRIANAFF 148 (157)
Q Consensus 137 ~----~~L~r~AD~~f 148 (157)
+ .++...||-++
T Consensus 88 ~~~~~~~~~~g~~~~l 103 (127)
T 3i42_A 88 KNDLGKEACELFDFYL 103 (127)
T ss_dssp CTTCCHHHHHHCSEEE
T ss_pred chhHHHHHHHhhHHhe
Confidence 2 44555566555
No 245
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=55.34 E-value=11 Score=29.15 Aligned_cols=74 Identities=9% Similarity=0.061 Sum_probs=39.7
Q ss_pred CCCcHHHHHhhceEEEEecCCCcc-----HHHHHHHHHHHHhhccCcceEEEEcCCc-------c-----------hHHH
Q 045172 62 GYGFADELKRAWFWVRMVLVKPQD-----ADVLLRNYMVAMVDKRRFGCLVVVSDDS-------D-----------FVEV 118 (157)
Q Consensus 62 gygla~eLrRAGv~V~~V~dkpqA-----AD~AL~~~~~~~~~~r~v~clvLVSDDs-------D-----------F~~~ 118 (157)
|.-|+.+|.+.|+.|..+...+.. .|+.=...+.+.+...++|++|-..... + -..+
T Consensus 15 G~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l 94 (315)
T 2ydy_A 15 GRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 94 (315)
T ss_dssp HHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC-------------------CHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHH
Confidence 456788899999988877543332 4544334444445333678877544321 1 1357
Q ss_pred HHHHHHcCCeEEEEcCC
Q 045172 119 FQEATLRWLKMVVVGDM 135 (157)
Q Consensus 119 lr~Arer~l~tVVVGd~ 135 (157)
++.|++.|.+.|.++-.
T Consensus 95 ~~a~~~~~~~~v~~SS~ 111 (315)
T 2ydy_A 95 AKEAAAVGAFLIYISSD 111 (315)
T ss_dssp HHHHHHHTCEEEEEEEG
T ss_pred HHHHHHcCCeEEEEchH
Confidence 88888888887777653
No 246
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=55.28 E-value=11 Score=26.40 Aligned_cols=74 Identities=9% Similarity=0.076 Sum_probs=42.0
Q ss_pred CCCcHHHHHhhceEEEEecCCCccHHHHHHH------------HHHHHhhccCcceEEEEcCCcc-hHHHHHHHHHc--C
Q 045172 62 GYGFADELKRAWFWVRMVLVKPQDADVLLRN------------YMVAMVDKRRFGCLVVVSDDSD-FVEVFQEATLR--W 126 (157)
Q Consensus 62 gygla~eLrRAGv~V~~V~dkpqAAD~AL~~------------~~~~~~~~r~v~clvLVSDDsD-F~~~lr~Arer--~ 126 (157)
|..++..|.+.|+.|..+...|+..+.+-.. +.+..+.-.+.+.+++..++.+ -..++..|++. +
T Consensus 19 G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~ 98 (140)
T 3fwz_A 19 GSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPD 98 (140)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHHCCC
Confidence 3457888999999888887777655443221 1111111135566666555443 33466677774 4
Q ss_pred CeEEEEcCC
Q 045172 127 LKMVVVGDM 135 (157)
Q Consensus 127 l~tVVVGd~ 135 (157)
.++++.-..
T Consensus 99 ~~iiar~~~ 107 (140)
T 3fwz_A 99 IEIIARAHY 107 (140)
T ss_dssp SEEEEEESS
T ss_pred CeEEEEECC
Confidence 555554443
No 247
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=55.22 E-value=0.99 Score=35.87 Aligned_cols=73 Identities=22% Similarity=0.188 Sum_probs=43.4
Q ss_pred CCcHHHHHhhceEEEEec------CCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHH-----HcCCeEEE
Q 045172 63 YGFADELKRAWFWVRMVL------VKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEAT-----LRWLKMVV 131 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~------dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Ar-----er~l~tVV 131 (157)
.-|+..|+.+|+.|..++ ...... .+ .+.+....+|++++ ++-|-...+++.+. -.+.+.++
T Consensus 154 ~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~--~~----~~~l~~~~~d~v~f-tS~s~v~~~~~~~~~~~~~l~~~~~~a 226 (269)
T 3re1_A 154 ELLAEQLRERGVGVDYLPLYRRYLPQHAPG--TL----LQRVEVERLNGLVV-SSGQGFEHLLQLAGDSWPDLAGLPLFV 226 (269)
T ss_dssp CHHHHHHHHTTCEEEEEECEEEECCCCCTT--TT----HHHHHHTTCCEEEC-SSHHHHTTTHHHHGGGHHHHTTSCEEE
T ss_pred HHHHHHHHHCCCEEEEEeEEEEECCCCCHH--HH----HHHHHcCCCCEEEE-cCHHHHHHHHHHhhHHHHHHhCCeEEE
Confidence 448999999999987662 221111 11 12233467888765 55555444444443 25788888
Q ss_pred EcCCCchHHHh
Q 045172 132 VGDMSDGALKR 142 (157)
Q Consensus 132 VGd~~~~~L~r 142 (157)
||..+-.++..
T Consensus 227 IG~~Ta~~l~~ 237 (269)
T 3re1_A 227 PSPRVASLAQA 237 (269)
T ss_dssp SSHHHHHHHHH
T ss_pred ECHHHHHHHHH
Confidence 88886555544
No 248
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=55.17 E-value=37 Score=24.62 Aligned_cols=75 Identities=15% Similarity=0.173 Sum_probs=45.3
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc--CCeEEEEcCCCc---
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR--WLKMVVVGDMSD--- 137 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer--~l~tVVVGd~~~--- 137 (157)
.+|...|...|+.|.++++..+ +.+.+.....|+++ .. +.+=.++++..++. ....+++....+
T Consensus 14 ~~l~~~L~~~g~~v~~~~~~~~---------al~~l~~~~~dlvi-lp-~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~ 82 (223)
T 2hqr_A 14 GEIEKGLNVKGFMADVTESLED---------GEYLMDIRNYDLVM-VS-DKNALSFVSRIKEKHSSIVVLVSSDNPTSEE 82 (223)
T ss_dssp HHHHHHHGGGTCCEEEESSHHH---------HHHHHTTSCCSEEE-EC-CTTHHHHHHHHHHHCTTSEEEEEESSCCHHH
T ss_pred HHHHHHHHHCCcEEEEECCHHH---------HHHHHhcCCCCEEE-eC-CCCHHHHHHHHHhCCCCCcEEEEECCCCHHH
Confidence 3566777888888876554322 22344455677777 43 44445777777774 677888877633
Q ss_pred --hHHHhhhhccc
Q 045172 138 --GALKRIANAFF 148 (157)
Q Consensus 138 --~~L~r~AD~~f 148 (157)
.++...||-++
T Consensus 83 ~~~~~~~Ga~~~l 95 (223)
T 2hqr_A 83 EVHAFEQGADDYI 95 (223)
T ss_dssp HHHHHHHTCSEEE
T ss_pred HHHHHHcCCCEEE
Confidence 33444555554
No 249
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=54.94 E-value=53 Score=26.08 Aligned_cols=39 Identities=10% Similarity=-0.137 Sum_probs=26.4
Q ss_pred HHHHHHhhccCcceEEEEcC-CcchHHHHHHHHHcCCeEEEEc
Q 045172 92 NYMVAMVDKRRFGCLVVVSD-DSDFVEVFQEATLRWLKMVVVG 133 (157)
Q Consensus 92 ~~~~~~~~~r~v~clvLVSD-DsDF~~~lr~Arer~l~tVVVG 133 (157)
..+.+.+...+.|+|+ +| -..|.. .-.|+..|+.+|.+.
T Consensus 108 ~~l~~~l~~~~PDlVi--~d~~~~~~~-~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 108 RATAEALDGDVPDLVL--YDDFPFIAG-QLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHSSSCCSEEE--EESTTHHHH-HHHHHHTTCCEEEEE
T ss_pred HHHHHHHhccCCCEEE--ECchhhhHH-HHHHHHhCCCEEEEE
Confidence 4555666566778776 45 444543 445888999999987
No 250
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=54.76 E-value=18 Score=28.86 Aligned_cols=59 Identities=7% Similarity=0.044 Sum_probs=39.7
Q ss_pred HHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeE
Q 045172 68 ELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKM 129 (157)
Q Consensus 68 eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~t 129 (157)
+++..|..|....-.+...|. ...+.++. ..+.+.|++.+...+...+++.|++.|+..
T Consensus 160 ~~~~~g~~v~~~~~~~~~~d~--~~~l~~i~-~~~~~vi~~~~~~~~~~~~~~qa~~~gl~~ 218 (395)
T 3h6g_A 160 APSRYNLRLKIRQLPADTKDA--KPLLKEMK-RGKEFHVIFDCSHEMAAGILKQALAMGMMT 218 (395)
T ss_dssp GGGTSSCEEEEEECCSSGGGG--HHHHHHHH-HTTCCEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred hhhcCCceEEEEEeCCCchhH--HHHHHHHh-hcCCeEEEEECCHHHHHHHHHHHHHccccC
Confidence 445567666543322334453 23333333 568999999999999999999999999863
No 251
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=54.71 E-value=23 Score=27.71 Aligned_cols=59 Identities=14% Similarity=0.077 Sum_probs=41.3
Q ss_pred HHHHHHhhccCcceEEEEcC------CcchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccchhhh
Q 045172 92 NYMVAMVDKRRFGCLVVVSD------DSDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFSWSDL 153 (157)
Q Consensus 92 ~~~~~~~~~r~v~clvLVSD------DsDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fsW~ev 153 (157)
+.+.+.+ ..|-+ +|++|| -+-..++++.+++.|+.+.||=..| ....-.|-+.+||+.+
T Consensus 74 ~~i~~~~-~~G~~-Va~ls~~GdP~i~~~g~~l~~~l~~~gi~vevIPGiS-s~~aa~a~~G~p~~~f 138 (242)
T 1wyz_A 74 SGYLKPL-AGGAS-MGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPS-SIILSVMASGFNGQSF 138 (242)
T ss_dssp HHHHHHH-HTTCC-EEEECC-------CHHHHHHHHHHHTTCCEEECCCCC-HHHHHHHHHTSCSSSE
T ss_pred HHHHHHH-HcCCE-EEEEecCCCCcccCcHHHHHHHHHHCCCCEEEeCcHH-HHHHHHHHcCCCCCeE
Confidence 5667777 34544 566664 3334678899999999998887765 5666777777887664
No 252
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=54.66 E-value=4.7 Score=35.19 Aligned_cols=68 Identities=9% Similarity=-0.147 Sum_probs=46.5
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
|.+-|..+|+.|-+ |+.|. ..-....+........+++|...+-.|...+++.|++.|+...+.|.++
T Consensus 3 l~~cl~~~~~~v~~-p~~~~---y~~~~~~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh 70 (473)
T 3rja_A 3 IEACLSAAGVPIDI-PGTAD---YERDVEPFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGH 70 (473)
T ss_dssp HHHHHHHTTCCBCC-TTSHH---HHHHTCCSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHhCCCcEEC-CCCCc---hHHHHHHhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCC
Confidence 45667778875543 33333 2211111111113445899999999999999999999999999999985
No 253
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=54.61 E-value=5.2 Score=30.97 Aligned_cols=75 Identities=9% Similarity=0.022 Sum_probs=44.2
Q ss_pred CCcHHHHHhhceEEEEec---CCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHH-HcCCeEEEEcCCCch
Q 045172 63 YGFADELKRAWFWVRMVL---VKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEAT-LRWLKMVVVGDMSDG 138 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~---dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Ar-er~l~tVVVGd~~~~ 138 (157)
..|+..|+.+|+.|..++ -.|...+..+ .+.+....+|++++.|. |-...++..+. ..+++.+.||..+-.
T Consensus 123 ~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~----~~~l~~~~~d~v~ftS~-s~v~~~~~~~~~~~~~~~~aIG~~Ta~ 197 (229)
T 3p9z_A 123 SSLDTILLEHGIDFKQAVVYENKLKHLTLSE----QNALKPKEKSILIFTAI-SHAKAFLHYFEFLENYTAISIGNTTAL 197 (229)
T ss_dssp SCHHHHHHHTTCEEEEEEEEEEEECCCCHHH----HHHHSCCTTCEEEECSH-HHHHHHHHHSCCCTTCEEEESSHHHHH
T ss_pred HHHHHHHHHCCCeEEEEEEEEeeCCCccHHH----HHHHhcCCCeEEEEECH-HHHHHHHHHhCcccCCEEEEECHHHHH
Confidence 679999999999887661 1111111222 23444567787776654 44444444432 246778888887655
Q ss_pred HHHh
Q 045172 139 ALKR 142 (157)
Q Consensus 139 ~L~r 142 (157)
+|..
T Consensus 198 ~l~~ 201 (229)
T 3p9z_A 198 YLQE 201 (229)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 254
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=54.55 E-value=20 Score=28.06 Aligned_cols=64 Identities=9% Similarity=0.025 Sum_probs=44.7
Q ss_pred cHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEE--Ec----CCcchHHHHHHHHHcCC--e-EEEEcC
Q 045172 65 FADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVV--VS----DDSDFVEVFQEATLRWL--K-MVVVGD 134 (157)
Q Consensus 65 la~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvL--VS----DDsDF~~~lr~Arer~l--~-tVVVGd 134 (157)
++..|+.+||.|.-. .+-|. .++.+.+...+.+.++| =+ .-..+.++++..+++|+ + .|+||.
T Consensus 112 v~~~l~~~G~~Vi~LG~~vp~-------e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG 184 (215)
T 3ezx_A 112 VTTMLGANGFQIVDLGVDVLN-------ENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGG 184 (215)
T ss_dssp HHHHHHHTSCEEEECCSSCCH-------HHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEES
T ss_pred HHHHHHHCCCeEEEcCCCCCH-------HHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 467899999999875 55565 34444444678888887 22 23457888999999987 2 477777
Q ss_pred C
Q 045172 135 M 135 (157)
Q Consensus 135 ~ 135 (157)
.
T Consensus 185 ~ 185 (215)
T 3ezx_A 185 A 185 (215)
T ss_dssp S
T ss_pred C
Confidence 6
No 255
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=54.46 E-value=42 Score=22.27 Aligned_cols=21 Identities=10% Similarity=0.093 Sum_probs=12.4
Q ss_pred CcHHHHHhhceEEEEecCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq 84 (157)
.++..|.+.|+.|..+...|+
T Consensus 18 ~~a~~L~~~g~~v~~~d~~~~ 38 (140)
T 1lss_A 18 TLAKSLSEKGHDIVLIDIDKD 38 (140)
T ss_dssp HHHHHHHHTTCEEEEEESCHH
T ss_pred HHHHHHHhCCCeEEEEECCHH
Confidence 355666666766666554444
No 256
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=54.45 E-value=19 Score=29.73 Aligned_cols=24 Identities=21% Similarity=-0.096 Sum_probs=19.1
Q ss_pred CCcHHHHHhhceEEEEecCCCccH
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDA 86 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAA 86 (157)
..++.+|++.|+.|..+...|.+.
T Consensus 32 ~~~~~a~~~~G~~v~~v~~~~~~~ 55 (433)
T 2dwc_A 32 KEIAIEAQRLGVEVVAVDRYANAP 55 (433)
T ss_dssp HHHHHHHHHTTCEEEEEESSTTCH
T ss_pred HHHHHHHHHCCCEEEEEECCCCCh
Confidence 347888999999999887777654
No 257
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=54.24 E-value=18 Score=30.83 Aligned_cols=42 Identities=14% Similarity=0.095 Sum_probs=33.7
Q ss_pred ceEEEEcCCc---chHHHHHHHHHc--CCeEEEEcCCCchHHHhhhh
Q 045172 104 GCLVVVSDDS---DFVEVFQEATLR--WLKMVVVGDMSDGALKRIAN 145 (157)
Q Consensus 104 ~clvLVSDDs---DF~~~lr~Arer--~l~tVVVGd~~~~~L~r~AD 145 (157)
+++|.+|-.= |-...++.|+++ |.+|+.|-+..+..|.+.||
T Consensus 110 dlvI~iS~SGeT~e~l~al~~ak~~~~Ga~~iaIT~~~~S~La~~aD 156 (393)
T 3odp_A 110 TLLISCARSGNSPESTAAVTLAEKIVDDISHLIITCNSEGKLALHAK 156 (393)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHGGG
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHhc
Confidence 5666666554 455566999999 99999999876789999999
No 258
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=54.06 E-value=27 Score=24.94 Aligned_cols=58 Identities=10% Similarity=-0.062 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhhccCcc-eEEEEcCCcchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhccc-chhhh
Q 045172 88 VLLRNYMVAMVDKRRFG-CLVVVSDDSDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFF-SWSDL 153 (157)
Q Consensus 88 ~AL~~~~~~~~~~r~v~-clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~f-sW~ev 153 (157)
-.....+.+.+ ....+ .++.|-|.. .=+..|+..|+++|.||...+ ..+|..+ +|.|+
T Consensus 162 ~~~~~~~~~~l-gi~~~~~~v~vGD~~---~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el 221 (231)
T 3kzx_A 162 PEPVLAALTNI-NIEPSKEVFFIGDSI---SDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDI 221 (231)
T ss_dssp SHHHHHHHHHH-TCCCSTTEEEEESSH---HHHHHHHHTTCEEEEECC---------CCEEESSHHHH
T ss_pred hHHHHHHHHHc-CCCcccCEEEEcCCH---HHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHH
Confidence 34455556555 34444 677777665 345778899999999988742 2344444 55554
No 259
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=53.74 E-value=31 Score=26.84 Aligned_cols=68 Identities=15% Similarity=0.127 Sum_probs=44.3
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|.+|-+.|..|-.+...+...-..+...+ ...+..+..+..|-+|...+-+.+.+- ++..+|-
T Consensus 43 IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 115 (271)
T 3v2g_A 43 IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEI----EQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVN 115 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH----HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH----HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 3477899999999999887555443223333333 245677888888888887765554432 6666664
No 260
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=53.58 E-value=53 Score=27.39 Aligned_cols=64 Identities=8% Similarity=-0.002 Sum_probs=41.6
Q ss_pred HHHHhhc--eEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHH-HHH-cCCeEEEEcCC
Q 045172 67 DELKRAW--FWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQE-ATL-RWLKMVVVGDM 135 (157)
Q Consensus 67 ~eLrRAG--v~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~-Are-r~l~tVVVGd~ 135 (157)
...+.-| +.+..+...|+.+|. ...+.+++ ..|+|.|+++| ..|.+.+.+ |.+ -+++.|+|+..
T Consensus 52 ~~~~~~G~~~~~~~~e~~~~~~d~--~~~l~~l~-~~g~d~Ii~~g--~~~~~~~~~vA~~~Pdv~fv~id~~ 119 (356)
T 3s99_A 52 ELVEALGDKVETTFLENVAEGADA--ERSIKRIA-RAGNKLIFTTS--FGYMDPTVKVAKKFPDVKFEHATGY 119 (356)
T ss_dssp HHHHHHTTTEEEEEECSCCTTHHH--HHHHHHHH-HTTCSEEEECS--GGGHHHHHHHHTTCTTSEEEEESCC
T ss_pred HHHHHhCCceEEEEEecCCCHHHH--HHHHHHHH-HCCCCEEEECC--HHHHHHHHHHHHHCCCCEEEEEecc
Confidence 3445557 888887777776664 34444555 68999777775 456665555 455 47888888654
No 261
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=53.52 E-value=15 Score=27.48 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=26.7
Q ss_pred cCCcchHHHHHHHHHcCCeEEEEc-----CCCchHHHhhh
Q 045172 110 SDDSDFVEVFQEATLRWLKMVVVG-----DMSDGALKRIA 144 (157)
Q Consensus 110 SDDsDF~~~lr~Arer~l~tVVVG-----d~~~~~L~r~A 144 (157)
+.+.++..+.+...+.++..+||| |++.+...+.+
T Consensus 37 ~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~ 76 (138)
T 1nu0_A 37 DGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARA 76 (138)
T ss_dssp TTEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHH
T ss_pred CcchHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHH
Confidence 346778999999999999999999 77665443333
No 262
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=53.51 E-value=9.1 Score=29.86 Aligned_cols=51 Identities=18% Similarity=0.180 Sum_probs=38.6
Q ss_pred CCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 82 KPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 82 kpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|.+.|.. ..+..+. ..+.|.|++.+...+...+++.+++.|++.-++|-.
T Consensus 179 ~~~~~d~~--~~l~~i~-~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 229 (353)
T 4gnr_A 179 VAGDTDFQ--AALTKMK-GKDFDAIVVPGYYNEAGKIVNQARGMGIDKPIVGGD 229 (353)
T ss_dssp CTTCCCCH--HHHHHHH-TSCCSEEECCSCHHHHHHHHHHHHHTTCCSCEEECG
T ss_pred CCCCCCHH--HHHHHHH-hcCCCEEEEecCcHHHHHHHHHHHHcCCCCcEEEec
Confidence 44455532 3444445 689999999999999999999999999987766543
No 263
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=53.37 E-value=28 Score=27.72 Aligned_cols=44 Identities=11% Similarity=-0.023 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEc
Q 045172 87 DVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVG 133 (157)
Q Consensus 87 D~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVG 133 (157)
+.-|+.|.++.+...|++-+++|+|+..+.+.+ ...|++.+...
T Consensus 33 GkPli~~~l~~l~~~~i~~VvVvt~~~~i~~~~---~~~g~~v~~~~ 76 (256)
T 3tqd_A 33 GKPMIQHVYESAIKSGAEEVVIATDDKRIRQVA---EDFGAVVCMTS 76 (256)
T ss_dssp TEEHHHHHHHHHHHTTCSEEEEEESCHHHHHHH---HHTTCEEEECC
T ss_pred CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHH---HHcCCeEEEeC
Confidence 344788888888767899999999875555544 45788876553
No 264
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=53.36 E-value=14 Score=30.03 Aligned_cols=75 Identities=11% Similarity=0.221 Sum_probs=55.7
Q ss_pred hhcCcccCCCc-HHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc--hHHHHHHHHHc--CCeE
Q 045172 55 AILTPKVGYGF-ADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD--FVEVFQEATLR--WLKM 129 (157)
Q Consensus 55 ~~l~pkvgygl-a~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD--F~~~lr~Arer--~l~t 129 (157)
-++.|-+.||. ..+... | -=|++-.|.+. .++..++.+++...|+..||+|...-. +..++++++.+ ++..
T Consensus 66 ~lv~P~i~yG~~s~~h~~--f-PGTisl~~~tl-~~~l~di~~sl~~~G~rrlvivNgHGGN~l~~a~~~l~~~~~~~~v 141 (254)
T 3lub_A 66 CMVMPPVPFGAHNPGQRE--L-PFCIHTRYATQ-QAILEDIVSSLHVQGFRKLLILSGHGGNNFKGMIRDLAFEYPDFLI 141 (254)
T ss_dssp EEECCCBCCBCCCTTTTT--S-TTCCBCCHHHH-HHHHHHHHHHHHHTTCCEEEEEESCTTCCCHHHHHHHHHHCTTCEE
T ss_pred EEEeCCccccCCCccccC--c-CCeEEeCHHHH-HHHHHHHHHHHHHcCCCEEEEEeCCchHHHHHHHHHHHHHCCCcEE
Confidence 47889999999 777642 2 12555556544 788899999998899999999986422 88888888886 6666
Q ss_pred EEEc
Q 045172 130 VVVG 133 (157)
Q Consensus 130 VVVG 133 (157)
+.+.
T Consensus 142 ~~~~ 145 (254)
T 3lub_A 142 AAAN 145 (254)
T ss_dssp EEEE
T ss_pred EEee
Confidence 6553
No 265
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=53.31 E-value=15 Score=27.01 Aligned_cols=31 Identities=16% Similarity=0.157 Sum_probs=24.1
Q ss_pred ceEEEEcCCc-----chHHHHHHHHHcCCeEEEEcC
Q 045172 104 GCLVVVSDDS-----DFVEVFQEATLRWLKMVVVGD 134 (157)
Q Consensus 104 ~clvLVSDDs-----DF~~~lr~Arer~l~tVVVGd 134 (157)
..+||+||-. +...+++.+++.|++.++||-
T Consensus 110 ~~ivllTDG~~~~~~~~~~~~~~~~~~gi~i~~igv 145 (200)
T 1v7p_C 110 KVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAV 145 (200)
T ss_dssp EEEEEEESSCCSCGGGHHHHHHHHHHTTEEEEEEEE
T ss_pred eEEEEEccCCCCCcccHHHHHHHHHHCCCEEEEEEe
Confidence 5789999832 245788999999998888875
No 266
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=53.23 E-value=24 Score=28.93 Aligned_cols=70 Identities=17% Similarity=0.132 Sum_probs=49.0
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcce-----EEEEcCCcchHHHHHHHHHcCCeE-EEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGC-----LVVVSDDSDFVEVFQEATLRWLKM-VVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~c-----lvLVSDDsDF~~~lr~Arer~l~t-VVVGd~ 135 (157)
-.+-..|+..|+.|-.|+.+|... ......+.|...|++. |+|-++.++-...+....+.|.+. ..|||.
T Consensus 107 ~ell~~L~~~G~~i~ivTgR~~~~---~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~ 182 (260)
T 3pct_A 107 VEFSNYVNANGGTMFFVSNRRDDV---EKAGTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVEDMGYDIVLFVGDN 182 (260)
T ss_dssp HHHHHHHHHTTCEEEEEEEEETTT---SHHHHHHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHTTTCEEEEEEESS
T ss_pred HHHHHHHHHCCCeEEEEeCCCccc---cHHHHHHHHHHcCcCccccceeEecCCCCChHHHHHHHHhcCCCEEEEECCC
Confidence 345678999999999999998740 1222233334557764 778788888888888877766664 568998
No 267
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=53.11 E-value=13 Score=28.28 Aligned_cols=71 Identities=11% Similarity=0.026 Sum_probs=44.9
Q ss_pred CCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcc------------------hHHHHHHHH
Q 045172 62 GYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSD------------------FVEVFQEAT 123 (157)
Q Consensus 62 gygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsD------------------F~~~lr~Ar 123 (157)
|-.|+.+|.+.|+.|..+...+ .|+.=...+.+.+...++|+++-....+. ...+++.|+
T Consensus 25 G~~l~~~L~~~g~~V~~~~r~~--~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~ 102 (292)
T 1vl0_A 25 GREIQKQLKGKNVEVIPTDVQD--LDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAY 102 (292)
T ss_dssp HHHHHHHHTTSSEEEEEECTTT--CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEeccCcc--CCCCCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 4567888999999998864432 23322233334443237899887654432 146788888
Q ss_pred HcCCeEEEEcC
Q 045172 124 LRWLKMVVVGD 134 (157)
Q Consensus 124 er~l~tVVVGd 134 (157)
+.|.+.|.+|-
T Consensus 103 ~~~~~iv~~SS 113 (292)
T 1vl0_A 103 SVGAEIVQIST 113 (292)
T ss_dssp HHTCEEEEEEE
T ss_pred HcCCeEEEech
Confidence 88887777765
No 268
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=52.91 E-value=27 Score=22.87 Aligned_cols=28 Identities=21% Similarity=0.095 Sum_probs=15.0
Q ss_pred eEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 105 CLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 105 clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
..+.|-|.. .+ +..|++.|+.+|.|..+
T Consensus 93 ~~~~vgD~~--~d-i~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 93 DCVLVDDSI--LN-VRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp GEEEEESCH--HH-HHHHHHHTCEEEECSCH
T ss_pred cEEEEcCCH--HH-HHHHHHCCCEEEEeCCh
Confidence 344454443 23 66666666666666543
No 269
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=52.88 E-value=9.7 Score=28.95 Aligned_cols=66 Identities=17% Similarity=0.068 Sum_probs=46.4
Q ss_pred cHHHHHhhceEEEEecCCCc----------cHHHHHHHHHHHHhhccCcceEEEE--------cCCcchHHHHHHHHHcC
Q 045172 65 FADELKRAWFWVRMVLVKPQ----------DADVLLRNYMVAMVDKRRFGCLVVV--------SDDSDFVEVFQEATLRW 126 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpq----------AAD~AL~~~~~~~~~~r~v~clvLV--------SDDsDF~~~lr~Arer~ 126 (157)
+.+.|+|||+.|.+++..+. .+|..|. -++...+|+|++. .+|.++.++++.+-++|
T Consensus 27 p~~~l~~ag~~V~~~s~~~~~v~~~~G~~v~~d~~l~-----~v~~~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~ 101 (177)
T 4hcj_A 27 SKKIFESAGYKTKVSSTFIGTAQGKLGGMTNIDLLFS-----EVDAVEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQ 101 (177)
T ss_dssp HHHHHHHTTCEEEEEESSSEEEEETTSCEEEECEEGG-----GCCGGGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCEEEEEECCCCeEeeCCCCEEecCccHH-----HCCHhHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhC
Confidence 46789999999999976553 3443321 1123456888886 46888999999999988
Q ss_pred CeEEEEcCC
Q 045172 127 LKMVVVGDM 135 (157)
Q Consensus 127 l~tVVVGd~ 135 (157)
-...-|..+
T Consensus 102 k~iaaIC~g 110 (177)
T 4hcj_A 102 KIVAGIGSG 110 (177)
T ss_dssp CEEEEETTH
T ss_pred CEEEEeccc
Confidence 766666554
No 270
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=52.76 E-value=20 Score=27.79 Aligned_cols=67 Identities=10% Similarity=0.180 Sum_probs=43.7
Q ss_pred HHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeE----EEEcCC
Q 045172 67 DELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKM----VVVGDM 135 (157)
Q Consensus 67 ~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~t----VVVGd~ 135 (157)
.++.+.|..|.....- +..+......+..+. ..+.+.+++.+...+...+++.|++.|+.. .++++.
T Consensus 151 ~~~~~~g~~v~~~~~~-~~~~~d~~~~l~~i~-~~~~~vIv~~~~~~~~~~il~~a~~~g~~~~~~~~i~~~~ 221 (389)
T 4gpa_A 151 EKAGQNGWHVSAICVE-NFNDVSYRQLLEELD-RRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANL 221 (389)
T ss_dssp HHHHTTTCEEEEEECT-TCCHHHHHHHHHHHH-HHTCCEEEEECCHHHHHHHHHHHHHHTCSBTTCEEEECSS
T ss_pred HHHHhcCceEEEEeec-CCcchhHHHHHHHhh-ccCCcEEEEEechhHHHHHHHHHHHhCCCCCceEEEEeCc
Confidence 4566677777654322 222222333333333 678899999999999999999999988753 355554
No 271
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=52.66 E-value=32 Score=25.81 Aligned_cols=68 Identities=13% Similarity=0.050 Sum_probs=42.2
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH---c--CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL---R--WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are---r--~l~tVVV 132 (157)
+|..+|.+|-+.|..|-.+..........+...+ ...+.++.++..|=+|...+-+.+.+ + .+..+|-
T Consensus 25 iG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 97 (256)
T 3ezl_A 25 IGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQ----KALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVN 97 (256)
T ss_dssp HHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHH----HHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH----HhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4577899999999999876533332222333322 24567788888888887766555443 2 5655553
No 272
>2vpz_A Thiosulfate reductase; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_A* 2vpw_A* 2vpy_A*
Probab=52.63 E-value=14 Score=33.65 Aligned_cols=47 Identities=17% Similarity=0.123 Sum_probs=37.1
Q ss_pred CcceEEEEcCCc------chHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccc
Q 045172 102 RFGCLVVVSDDS------DFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 102 ~v~clvLVSDDs------DF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
..+||+++..|. .+..-++.|+++|.+.|||.-. .......||.|++
T Consensus 199 ~ad~il~~G~n~~~~~p~~~~~~~~~a~~~G~klividPr-~t~ta~~Ad~~l~ 251 (765)
T 2vpz_A 199 NARYIVLIGHHIGEDTHNTQLQDFALALKNGAKVVVVDPR-FSTAAAKAHRWLP 251 (765)
T ss_dssp GCSEEEEESCCBTTBCCHHHHHHHHHHHHTTCEEEEECSB-CCTTGGGCSEEEC
T ss_pred cCCEEEEEeCChhhcCChHHHHHHHHHHHCCCEEEEECCC-CCcchhhCCeEeC
Confidence 458999998772 6777889999999999999754 2356778999884
No 273
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=52.54 E-value=27 Score=27.54 Aligned_cols=56 Identities=18% Similarity=0.188 Sum_probs=46.2
Q ss_pred cHHHHHHHHHHHHhhccCcceEEEEcCCcc----hHHHHHHHHHcCCeEEEEcCCCchHH
Q 045172 85 DADVLLRNYMVAMVDKRRFGCLVVVSDDSD----FVEVFQEATLRWLKMVVVGDMSDGAL 140 (157)
Q Consensus 85 AAD~AL~~~~~~~~~~r~v~clvLVSDDsD----F~~~lr~Arer~l~tVVVGd~~~~~L 140 (157)
..|+...+.+.+.+...|++|=+=|++=+. ..++++.++++|++.+++|-+-...|
T Consensus 15 ~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~L 74 (166)
T 3oow_A 15 KSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHL 74 (166)
T ss_dssp GGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCH
T ss_pred HHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcchhh
Confidence 578999999999999999999999888877 77777777889999988887732333
No 274
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=52.54 E-value=19 Score=26.06 Aligned_cols=33 Identities=6% Similarity=0.099 Sum_probs=23.3
Q ss_pred ccC-cceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 100 KRR-FGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 100 ~r~-v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
..+ +|.+++.|.+ +|.++ +++-+++.+|+|+..
T Consensus 62 ~~~~vd~v~~~~~~-~f~~~---~~~l~~~~iv~G~d~ 95 (143)
T 3glv_A 62 ELKVVDRAILGHEG-DMMKT---VIEVKPDIITLGYDQ 95 (143)
T ss_dssp TBTTCSEEEECCTT-CHHHH---HHHHCCSEEEECTTC
T ss_pred hcCCCCEEEEcCch-hHHHH---HHhcCCCEEEECCCC
Confidence 445 8887776554 58875 456788999999763
No 275
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=52.51 E-value=27 Score=28.72 Aligned_cols=70 Identities=16% Similarity=0.135 Sum_probs=49.9
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcc-----eEEEEcCCcchHHHHHHHHHcCCeE-EEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFG-----CLVVVSDDSDFVEVFQEATLRWLKM-VVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~-----clvLVSDDsDF~~~lr~Arer~l~t-VVVGd~ 135 (157)
-.+-..|+..|+.|-.|+.+|..- ......+.|...|++ .|+|-++.++-...+....+.|.+. ..|||.
T Consensus 107 ~ell~~L~~~G~ki~ivTgR~~~~---~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~ 182 (262)
T 3ocu_A 107 VEFNNYVNSHNGKVFYVTNRKDST---EKSGTIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEIVLYVGDN 182 (262)
T ss_dssp HHHHHHHHHTTEEEEEEEEEETTT---THHHHHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHHTTEEEEEEEESS
T ss_pred HHHHHHHHHCCCeEEEEeCCCccc---hHHHHHHHHHHcCcCcccccceeccCCCCChHHHHHHHHhcCCCEEEEECCC
Confidence 446778999999999999998740 122223333455775 5888888888888888887776654 568997
No 276
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=52.38 E-value=51 Score=23.18 Aligned_cols=58 Identities=19% Similarity=0.092 Sum_probs=31.4
Q ss_pred HHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCCc------hHHHhh-hhccc-chhhh
Q 045172 92 NYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMSD------GALKRI-ANAFF-SWSDL 153 (157)
Q Consensus 92 ~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~~------~~L~r~-AD~~f-sW~ev 153 (157)
.++.+.+ +...+-++.|.|.. . =+..|+..|+.+|.++.... ..++.. ||.-+ ++.|+
T Consensus 150 ~~~~~~l-~~~~~~~i~iGD~~--~-Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el 215 (229)
T 2fdr_A 150 LHGAAQF-GVSPDRVVVVEDSV--H-GIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL 215 (229)
T ss_dssp HHHHHHH-TCCGGGEEEEESSH--H-HHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGH
T ss_pred HHHHHHc-CCChhHeEEEcCCH--H-HHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHH
Confidence 3344433 23334445555443 3 34567777888888877642 136665 77555 55554
No 277
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=52.37 E-value=28 Score=24.71 Aligned_cols=79 Identities=11% Similarity=0.042 Sum_probs=42.5
Q ss_pred CcHHHHHhh-ceEEEEecCCCccHHHHHHHHHHHHhhccCc----ceEEEEcCCcc-----hHHHHHH-HHHcC--C---
Q 045172 64 GFADELKRA-WFWVRMVLVKPQDADVLLRNYMVAMVDKRRF----GCLVVVSDDSD-----FVEVFQE-ATLRW--L--- 127 (157)
Q Consensus 64 gla~eLrRA-Gv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v----~clvLVSDDsD-----F~~~lr~-Arer~--l--- 127 (157)
.+-..|+.. |+.+-.++..+.. ...... ...|+ +. +..+++.. +..+++. +..-| +
T Consensus 100 ~~l~~l~~~~g~~~~i~t~~~~~----~~~~~l---~~~~l~~~f~~-~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~~ 171 (234)
T 2hcf_A 100 ELLDALSSRSDVLLGLLTGNFEA----SGRHKL---KLPGIDHYFPF-GAFADDALDRNELPHIALERARRMTGANYSPS 171 (234)
T ss_dssp HHHHHHHTCTTEEEEEECSSCHH----HHHHHH---HTTTCSTTCSC-EECTTTCSSGGGHHHHHHHHHHHHHCCCCCGG
T ss_pred HHHHHHHhCCCceEEEEcCCcHH----HHHHHH---HHCCchhhcCc-ceecCCCcCccchHHHHHHHHHHHhCCCCCcc
Confidence 344567778 9999999888752 112222 22233 33 33444431 2333333 34455 2
Q ss_pred eEEEEcCC-CchHHHhhhh---cccch
Q 045172 128 KMVVVGDM-SDGALKRIAN---AFFSW 150 (157)
Q Consensus 128 ~tVVVGd~-~~~~L~r~AD---~~fsW 150 (157)
.+++|||+ +|-...+.|. +++.|
T Consensus 172 ~~i~iGD~~~Di~~a~~aG~~~i~v~~ 198 (234)
T 2hcf_A 172 QIVIIGDTEHDIRCARELDARSIAVAT 198 (234)
T ss_dssp GEEEEESSHHHHHHHHTTTCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHCCCcEEEEcC
Confidence 58999998 5445556666 44444
No 278
>3qek_A NMDA glutamate receptor subunit; amino terminal domain, ION channel, NMDA receptor, allosteri modulation, phenylethanolamine, polyamine; HET: NAG BMA; 2.00A {Xenopus laevis} PDB: 3qel_A* 3qem_A* 3q41_A*
Probab=52.26 E-value=8.2 Score=30.78 Aligned_cols=34 Identities=9% Similarity=0.234 Sum_probs=29.3
Q ss_pred HHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCe
Q 045172 94 MVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLK 128 (157)
Q Consensus 94 ~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~ 128 (157)
+.++. ..+.+.|++.++..+...+++.|++.|+.
T Consensus 208 l~~i~-~~~~~vii~~~~~~~~~~~~~~a~~~g~~ 241 (384)
T 3qek_A 208 LLEAK-ELEARVIILSASEDDATAVYKSAAMLDMT 241 (384)
T ss_dssp HHHHH-TSSCCEEEEECCHHHHHHHHHHHHHTTCS
T ss_pred HHHHH-hcCCcEEEEECCHHHHHHHHHHHHHcCCc
Confidence 33444 67999999999999999999999999997
No 279
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=52.22 E-value=26 Score=26.89 Aligned_cols=68 Identities=13% Similarity=0.071 Sum_probs=41.8
Q ss_pred CCcHHHHHhhce---EEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 63 YGFADELKRAWF---WVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv---~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
-|+.++|...|+ .|..+ .+.- .|..-...+.+.+.++++|.+++++++. ...+. .. ..++-+|.+|..
T Consensus 21 ~gi~~~l~~~gy~g~~v~l~~~~~~--~~~~~~~~~~~~l~~~~vDgII~~~~~~-~~~~~-~~-~~~iPvV~~~~~ 92 (295)
T 3lft_A 21 KGIQDGLAEEGYKDDQVKIDFMNSE--GDQSKVATMSKQLVANGNDLVVGIATPA-AQGLA-SA-TKDLPVIMAAIT 92 (295)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEEECT--TCHHHHHHHHHHHTTSSCSEEEEESHHH-HHHHH-HH-CSSSCEEEESCS
T ss_pred HHHHHHHHHcCCCCCceEEEEecCC--CCHHHHHHHHHHHHhcCCCEEEECCcHH-HHHHH-Hc-CCCCCEEEEecc
Confidence 467889999999 66553 2211 1233344555555589999999886432 22222 22 478898888753
No 280
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=52.16 E-value=36 Score=27.11 Aligned_cols=51 Identities=16% Similarity=0.136 Sum_probs=42.8
Q ss_pred cHHHHHHHHHHHHhhccCcceEEEEcCCcc----hHHHHHHHHHcCCeEEEEcCC
Q 045172 85 DADVLLRNYMVAMVDKRRFGCLVVVSDDSD----FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 85 AAD~AL~~~~~~~~~~r~v~clvLVSDDsD----F~~~lr~Arer~l~tVVVGd~ 135 (157)
..|+-..+.+.+.++..|+++=+=|.+-+. ..++.+.++++|++.++.|=+
T Consensus 22 ~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG 76 (173)
T 4grd_A 22 SSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAG 76 (173)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEE
T ss_pred HhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEecc
Confidence 679999999999999999999888887776 555667777799999888765
No 281
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=52.08 E-value=44 Score=26.05 Aligned_cols=42 Identities=19% Similarity=0.252 Sum_probs=30.5
Q ss_pred ceEEEEcCCc-----chHHHHHHHHHcCCeEEEEcCC--CchH-HHhhhh
Q 045172 104 GCLVVVSDDS-----DFVEVFQEATLRWLKMVVVGDM--SDGA-LKRIAN 145 (157)
Q Consensus 104 ~clvLVSDDs-----DF~~~lr~Arer~l~tVVVGd~--~~~~-L~r~AD 145 (157)
..|||+||-. +....++.++..|+..++||-+ .+.. |...|+
T Consensus 127 ~~iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~~~~~~~L~~iA~ 176 (266)
T 4hqo_A 127 QLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQGINHQFNRLIAG 176 (266)
T ss_dssp EEEEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSSSCCHHHHHHHHT
T ss_pred eEEEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCcccCHHHHHHhhC
Confidence 5789999843 5778889999999998877655 2333 467773
No 282
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=52.07 E-value=51 Score=22.16 Aligned_cols=64 Identities=6% Similarity=-0.004 Sum_probs=40.3
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEEcCCC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR--WLKMVVVGDMS 136 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer--~l~tVVVGd~~ 136 (157)
.|...|...|+.|..+++..+ +.+.+.....|++++=.+ +.+-.++++..++. .+..|++++..
T Consensus 22 ~l~~~L~~~g~~v~~~~~~~~---------a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 22 SLKRLIKRLGCNIITFTSPLD---------ALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHTTTCEEEEESCHHH---------HHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHHcCCeEEEeCCHHH---------HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 466677888988887554322 334444556776666433 33455778887774 67788887763
No 283
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=52.06 E-value=16 Score=30.39 Aligned_cols=79 Identities=11% Similarity=-0.025 Sum_probs=0.0
Q ss_pred cHHHHHhhc-eEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEE-----cCCcchHHHHHHHHHcCCeEEE-EcCCCc
Q 045172 65 FADELKRAW-FWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVV-----SDDSDFVEVFQEATLRWLKMVV-VGDMSD 137 (157)
Q Consensus 65 la~eLrRAG-v~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLV-----SDDsDF~~~lr~Arer~l~tVV-VGd~~~ 137 (157)
|..+|++-| =.|-.|.| +.....-+...+.+.+...|+++.++- .+.+....+++.+++.+...|| ||.++.
T Consensus 22 l~~~l~~~g~~~~livtd-~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv 100 (386)
T 1rrm_A 22 LTDEVKRRGYQKALIVTD-KTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSP 100 (386)
T ss_dssp HHHHHHHHTCCEEEEECB-HHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESHHH
T ss_pred HHHHHHHcCCCEEEEEEC-cchhhchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCChHH
Q ss_pred hHHHhhh
Q 045172 138 GALKRIA 144 (157)
Q Consensus 138 ~~L~r~A 144 (157)
..+...+
T Consensus 101 ~D~aK~i 107 (386)
T 1rrm_A 101 QDTCKAI 107 (386)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
No 284
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=51.97 E-value=46 Score=28.86 Aligned_cols=74 Identities=11% Similarity=0.051 Sum_probs=43.3
Q ss_pred HHHHhhceEEEEecCCCccHHHHHHHHHHH---H-hhccCcceEEEEcCCcchHHHHHHHHHcCC---eEEEEcCC-Cch
Q 045172 67 DELKRAWFWVRMVLVKPQDADVLLRNYMVA---M-VDKRRFGCLVVVSDDSDFVEVFQEATLRWL---KMVVVGDM-SDG 138 (157)
Q Consensus 67 ~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~---~-~~~r~v~clvLVSDDsDF~~~lr~Arer~l---~tVVVGd~-~~~ 138 (157)
.+|+++|+.+=.++.+|. ..+...+.+ + +...++..++ +.-.+.=..+.+.+++-|+ .++.|||. .+.
T Consensus 266 ~~Lk~~Gi~laI~Snn~~---~~v~~~l~~~~~~~l~l~~~~~v~-~~~KPKp~~l~~al~~Lgl~pee~v~VGDs~~Di 341 (387)
T 3nvb_A 266 KKLKNRGIIIAVCSKNNE---GKAKEPFERNPEMVLKLDDIAVFV-ANWENKADNIRTIQRTLNIGFDSMVFLDDNPFER 341 (387)
T ss_dssp HHHHHTTCEEEEEEESCH---HHHHHHHHHCTTCSSCGGGCSEEE-EESSCHHHHHHHHHHHHTCCGGGEEEECSCHHHH
T ss_pred HHHHHCCCEEEEEcCCCH---HHHHHHHhhccccccCccCccEEE-eCCCCcHHHHHHHHHHhCcCcccEEEECCCHHHH
Confidence 689999999999999997 222222221 1 1113444443 3333444445555566676 68999998 333
Q ss_pred HHHhhh
Q 045172 139 ALKRIA 144 (157)
Q Consensus 139 ~L~r~A 144 (157)
.-.+.|
T Consensus 342 ~aaraa 347 (387)
T 3nvb_A 342 NMVREH 347 (387)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 334444
No 285
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=51.87 E-value=18 Score=29.95 Aligned_cols=70 Identities=13% Similarity=0.095 Sum_probs=47.0
Q ss_pred CCcHHHHHhhceEEEEecCCCc---cHHHHHHHHHHHHhh-------------------ccCcceEEEEcCCcchH---H
Q 045172 63 YGFADELKRAWFWVRMVLVKPQ---DADVLLRNYMVAMVD-------------------KRRFGCLVVVSDDSDFV---E 117 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpq---AAD~AL~~~~~~~~~-------------------~r~v~clvLVSDDsDF~---~ 117 (157)
..+|.+++.+...+- +-..|+ |-.-||| +.++.. +.+...+++.++|.-+. +
T Consensus 195 ~~~a~~~~~~~~~~~-lG~G~~~~~A~E~ALK--lkE~~~i~ae~~~~~E~~HGP~alv~~~~~vi~~~~~~~~~~~~~~ 271 (334)
T 3hba_A 195 QLRAGSLTDVKNLVV-LGRGFGYAVSKEIALK--LKEVCAIHAEAFSSAEFLHGPVTLVEKKLSILDVCIRDESYGSHVE 271 (334)
T ss_dssp SCCGGGTTTCCEEEE-EECTHHHHHHHHHHHH--HHHHHCCEEEEEETTTCC-----------CEEEEECCSTTHHHHHH
T ss_pred HHHHHHHhCCCeEEE-EeCCcCHHHHHHHHHH--HHHHcCcceEEecHHhhccchHHhcCCCceEEEEecCchhHHHHHH
Confidence 456777777664443 455555 6667765 455433 45568889999998877 5
Q ss_pred HHHHHHHcCCeEEEEcCC
Q 045172 118 VFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 118 ~lr~Arer~l~tVVVGd~ 135 (157)
++++.+++|.++++|++.
T Consensus 272 ~~~e~~~~g~~v~~i~~~ 289 (334)
T 3hba_A 272 QIANVKQRGANLIHLHQT 289 (334)
T ss_dssp HHHHHHHTTCCEEEEECS
T ss_pred HHHHHHHcCCeEEEEECC
Confidence 667778899999999986
No 286
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=51.80 E-value=36 Score=29.58 Aligned_cols=74 Identities=15% Similarity=0.158 Sum_probs=42.6
Q ss_pred CcccCCCcH-----HHHHhhce--------EEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH
Q 045172 58 TPKVGYGFA-----DELKRAWF--------WVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL 124 (157)
Q Consensus 58 ~pkvgygla-----~eLrRAGv--------~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are 124 (157)
+|.+|+++. ..|+..|. .|-.++-.+.+-..|+ .+.+.+-+.|+.+.+-..+. .|..-++.|.+
T Consensus 333 ~PavGFaig~eRl~~~l~~~~~~~~~~~~~~v~v~~~~~~~~~~a~--~la~~LR~~Gi~ve~~~~~~-slkkq~k~A~k 409 (456)
T 3lc0_A 333 IPCAGFGFGDCVIVELLQEKRLLPDIPHVVDDVVIPFDESMRPHAL--AVLRRLRDAGRSADIILDKK-KVVQAFNYADR 409 (456)
T ss_dssp CCEEEEEEESSHHHHHHHHTTCCCCCCCCEEEEEEESSGGGHHHHH--HHHHHHHHTTCCEEECCSCC-CHHHHHHHHHH
T ss_pred CCEEEEEeEHHHHHHHHHhcCCCCccCCCCcEEEEEcCHHHHHHHH--HHHHHHHHCCCeEEEecCCC-CHHHHHHHHHH
Confidence 688887654 34554442 2223333333322222 23344445678766554444 49999999999
Q ss_pred cCCeEEE-EcC
Q 045172 125 RWLKMVV-VGD 134 (157)
Q Consensus 125 r~l~tVV-VGd 134 (157)
.|...+| ||+
T Consensus 410 ~ga~~vviiGe 420 (456)
T 3lc0_A 410 VGAVRAVLVAP 420 (456)
T ss_dssp TTEEEEEEECH
T ss_pred cCCCEEEEECC
Confidence 9987664 565
No 287
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=51.62 E-value=36 Score=26.06 Aligned_cols=68 Identities=10% Similarity=0.047 Sum_probs=43.7
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|.+|-+.|..|-.+.......-..+...+ ...+..+.++..|=+|...+-+.+.+- ++..+|-
T Consensus 38 IG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~ 110 (272)
T 4e3z_A 38 IGAAVCRLAARQGWRVGVNYAANREAADAVVAAI----TESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVN 110 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH----HHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHH----HhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3577899999999999776444432222333322 245667888888888877766655543 6766664
No 288
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=51.53 E-value=27 Score=29.46 Aligned_cols=75 Identities=8% Similarity=0.037 Sum_probs=47.2
Q ss_pred HHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEE--EcCCcchH---HHHHHHHHcCCeEEE-EcCCCchHH
Q 045172 67 DELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVV--VSDDSDFV---EVFQEATLRWLKMVV-VGDMSDGAL 140 (157)
Q Consensus 67 ~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvL--VSDDsDF~---~~lr~Arer~l~tVV-VGd~~~~~L 140 (157)
.+|+ -|=.|-.|.|.+.....-+...+.+.+ . |++++++ |..++.+. .+++.+++.+...|| ||.++...+
T Consensus 45 ~~l~-~g~r~liVtd~~~~~~~g~~~~v~~~L-~-g~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~ 121 (408)
T 1oj7_A 45 EQIP-HDARVLITYGGGSVKKTGVLDQVLDAL-K-GMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDG 121 (408)
T ss_dssp HHSC-TTCEEEEEECSSHHHHHSHHHHHHHHT-T-TSEEEEECCCCSSCBHHHHHHHHHHHHHHTCCEEEEEESHHHHHH
T ss_pred HHHh-cCCEEEEEECCchhhhccHHHHHHHHh-C-CCEEEEeCCcCCCcCHHHHHHHHHHHHHcCCCEEEEeCCchHHHH
Confidence 3444 465677777776544433677888888 4 8876544 22344554 467788888987776 888755444
Q ss_pred Hhhh
Q 045172 141 KRIA 144 (157)
Q Consensus 141 ~r~A 144 (157)
...+
T Consensus 122 AK~i 125 (408)
T 1oj7_A 122 TKFI 125 (408)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 289
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=51.41 E-value=61 Score=22.86 Aligned_cols=19 Identities=21% Similarity=0.260 Sum_probs=11.6
Q ss_pred cHHHHHhhceEEEEecCCCc
Q 045172 65 FADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpq 84 (157)
+-..|+.. +.+-.++..+.
T Consensus 108 ~l~~l~~~-~~~~i~t~~~~ 126 (234)
T 3u26_A 108 VLKSLKGK-YHVGMITDSDT 126 (234)
T ss_dssp HHHHHTTT-SEEEEEESSCH
T ss_pred HHHHHHhC-CcEEEEECCCH
Confidence 34455666 66666776665
No 290
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=51.38 E-value=17 Score=26.33 Aligned_cols=42 Identities=14% Similarity=0.188 Sum_probs=29.5
Q ss_pred eEEEEcCCc---chHHHHHHHHHcCCeEEEEcCC---CchHHHhhhhc
Q 045172 105 CLVVVSDDS---DFVEVFQEATLRWLKMVVVGDM---SDGALKRIANA 146 (157)
Q Consensus 105 clvLVSDDs---DF~~~lr~Arer~l~tVVVGd~---~~~~L~r~AD~ 146 (157)
.+|+++|+- +.....+.+++.|++.++||-+ ....|...|..
T Consensus 111 ~vivltdg~~~~~~~~~~~~~~~~gi~v~~igvG~~~~~~~L~~iA~~ 158 (189)
T 1atz_A 111 AVVILVTDVSVDSVDAAADAARSNRVTVFPIGIGDRYDAAQLRILAGP 158 (189)
T ss_dssp EEEEEECSCCSSCCHHHHHHHHHTTEEEEEEEESSSSCHHHHHHHTGG
T ss_pred EEEEEeCCCCCchHHHHHHHHHHCCCEEEEEEcCCcCCHHHHHHHHCC
Confidence 367777763 5788899999999887666543 33567777654
No 291
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=51.37 E-value=70 Score=25.35 Aligned_cols=64 Identities=19% Similarity=0.029 Sum_probs=43.1
Q ss_pred cHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcC----CcchHHHHHHHHHcCCe-EEEEcCC
Q 045172 65 FADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD----DSDFVEVFQEATLRWLK-MVVVGDM 135 (157)
Q Consensus 65 la~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD----DsDF~~~lr~Arer~l~-tVVVGd~ 135 (157)
++..|+.+||.|.-. ++-|. ..+.+.+...+.+.++|-+- -..+..+++..++.|.. .|+||..
T Consensus 143 va~~L~~~G~~Vi~LG~~vp~-------e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~ 212 (258)
T 2i2x_B 143 VTALLRANGYNVVDLGRDVPA-------EEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGG 212 (258)
T ss_dssp HHHHHHHTTCEEEEEEEECCS-------HHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEEST
T ss_pred HHHHHHHCCCEEEECCCCCCH-------HHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECc
Confidence 467899999999765 45555 23444444568888888663 24577788888887754 3556664
No 292
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=51.29 E-value=34 Score=26.26 Aligned_cols=64 Identities=19% Similarity=0.252 Sum_probs=51.6
Q ss_pred CCcHHHHHh-hceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC-------CcchHHHHHHHHHcCCeEE
Q 045172 63 YGFADELKR-AWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD-------DSDFVEVFQEATLRWLKMV 130 (157)
Q Consensus 63 ygla~eLrR-AGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD-------DsDF~~~lr~Arer~l~tV 130 (157)
-|=+.-|++ +|+.|..|...|.--| -++.+++.+..|+.++--.| +.|=-.+.|.|-+.++-.+
T Consensus 46 ~gTa~~L~e~~Gl~v~~v~k~~eGG~----p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~ 117 (152)
T 1b93_A 46 GTTGNLISRATGMNVNAMLSGPMGGD----QQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVA 117 (152)
T ss_dssp TTHHHHHHHHHCCCCEEECCGGGTHH----HHHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEE
T ss_pred cHHHHHHHHHhCceeEEEEecCCCCC----chHHHHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEE
Confidence 366889999 9999999987676444 37899998999999999988 4466778888888887654
No 293
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=51.09 E-value=69 Score=23.35 Aligned_cols=76 Identities=12% Similarity=0.015 Sum_probs=40.4
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhh-ccCcceEEEEcCCcchHHHHHHHHHcCC---eEEEEcCCC--ch
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVD-KRRFGCLVVVSDDSDFVEVFQEATLRWL---KMVVVGDMS--DG 138 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~-~r~v~clvLVSDDsDF~~~lr~Arer~l---~tVVVGd~~--~~ 138 (157)
+-..|+ .|+.+-.++..+... ....++.+. ..-++.++. +..++=..+...+..-|+ .+++|||+. |-
T Consensus 120 ~l~~l~-~~~~~~i~t~~~~~~----~~~~l~~~~l~~~f~~i~~-~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di 193 (251)
T 2pke_A 120 AVAAIA-ADYAVVLITKGDLFH----QEQKIEQSGLSDLFPRIEV-VSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDV 193 (251)
T ss_dssp HHHHHH-TTSEEEEEEESCHHH----HHHHHHHHSGGGTCCCEEE-ESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCC
T ss_pred HHHHHH-CCCEEEEEeCCCHHH----HHHHHHHcCcHHhCceeee-eCCCCHHHHHHHHHHhCcCchhEEEECCCchhhH
Confidence 445666 888888888877521 112222210 122344443 455554444555555565 489999983 44
Q ss_pred HHHhhhhc
Q 045172 139 ALKRIANA 146 (157)
Q Consensus 139 ~L~r~AD~ 146 (157)
...+.|.+
T Consensus 194 ~~a~~aG~ 201 (251)
T 2pke_A 194 EPVLAIGG 201 (251)
T ss_dssp HHHHHTTC
T ss_pred HHHHHCCC
Confidence 44444443
No 294
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=50.68 E-value=28 Score=26.27 Aligned_cols=67 Identities=9% Similarity=0.030 Sum_probs=43.9
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVV 131 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVV 131 (157)
+|..+|.+|-+.|..|-.+...+......+ .+.+...+..+.++..|=+|...+-+.+.+- ++..+|
T Consensus 19 IG~~~a~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv 90 (264)
T 3i4f_A 19 LGKQVTEKLLAKGYSVTVTYHSDTTAMETM----KETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLI 90 (264)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred hHHHHHHHHHHCCCEEEEEcCCChHHHHHH----HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 457789999999999998766555333333 2333344567778888888877665555442 666665
No 295
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=50.63 E-value=48 Score=22.32 Aligned_cols=64 Identities=17% Similarity=0.105 Sum_probs=39.0
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEEcCCC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR--WLKMVVVGDMS 136 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer--~l~tVVVGd~~ 136 (157)
.|...|.+.|+.|.++++.. .+.+.+.....+++++=.+ +.+=.++++..++. ++..|++++..
T Consensus 18 ~l~~~L~~~g~~v~~~~~~~---------~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (155)
T 1qkk_A 18 AMQQTLELAGFTVSSFASAT---------EALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHG 85 (155)
T ss_dssp HHHHHHHHTTCEEEEESCHH---------HHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGG
T ss_pred HHHHHHHHcCcEEEEECCHH---------HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCC
Confidence 46677888899888755422 2334444455676665433 23344667777764 67788887763
No 296
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=50.61 E-value=11 Score=27.68 Aligned_cols=73 Identities=18% Similarity=0.184 Sum_probs=48.8
Q ss_pred cCCCcHHHHHhhceEEEEecCCCcc-----------HHHHH-HHHHHHHhhccCcceEEEEcCCcc----------hHHH
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQD-----------ADVLL-RNYMVAMVDKRRFGCLVVVSDDSD----------FVEV 118 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqA-----------AD~AL-~~~~~~~~~~r~v~clvLVSDDsD----------F~~~ 118 (157)
+|..++.+|.+.|+.|..+...|.. .|..= ...+.+.+ .++|.++-...... -..+
T Consensus 12 iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~n~~~~~~l 89 (219)
T 3dqp_A 12 VGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQL--HGMDAIINVSGSGGKSLLKVDLYGAVKL 89 (219)
T ss_dssp HHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTT--TTCSEEEECCCCTTSSCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHH--cCCCEEEECCcCCCCCcEeEeHHHHHHH
Confidence 4567888999999999888655542 34433 44555555 37999887665432 3568
Q ss_pred HHHHHHcCCeEEE-EcCC
Q 045172 119 FQEATLRWLKMVV-VGDM 135 (157)
Q Consensus 119 lr~Arer~l~tVV-VGd~ 135 (157)
++.|++.|++.+| +|..
T Consensus 90 ~~a~~~~~~~~iv~~SS~ 107 (219)
T 3dqp_A 90 MQAAEKAEVKRFILLSTI 107 (219)
T ss_dssp HHHHHHTTCCEEEEECCT
T ss_pred HHHHHHhCCCEEEEECcc
Confidence 8889999986555 4543
No 297
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=50.57 E-value=40 Score=25.45 Aligned_cols=68 Identities=13% Similarity=0.113 Sum_probs=42.9
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|..|-+.|..|-.+...+...-.++... +...+.++.++..|=+|...+-+.+.+- ++..+|-
T Consensus 16 IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~ 88 (246)
T 3osu_A 16 IGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEE----IKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVN 88 (246)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----HHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 356788999999999977644333222222222 2245778888888888877765555442 6666653
No 298
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=50.43 E-value=51 Score=21.67 Aligned_cols=64 Identities=9% Similarity=0.144 Sum_probs=39.3
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEc-CCcchHHHHHHHHHc--CCeEEEEcCCC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVS-DDSDFVEVFQEATLR--WLKMVVVGDMS 136 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVS-DDsDF~~~lr~Arer--~l~tVVVGd~~ 136 (157)
.|...|.+.|+.|..+++..+ +.+.+.....|++++=. .+.+-.++++..++. ++..+++++..
T Consensus 19 ~l~~~L~~~g~~v~~~~~~~~---------a~~~l~~~~~dlvi~d~~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 19 AVKNALEKDGFNVIWAKNEQE---------AFTFLRREKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp HHHHHHGGGTCEEEEESSHHH---------HHHHHTTSCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred HHHHHHHhCCCEEEEECCHHH---------HHHHHhccCCCEEEEeCCCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 456778888998887654322 33344445667666543 233344667777764 57788887763
No 299
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=50.22 E-value=30 Score=25.23 Aligned_cols=22 Identities=5% Similarity=-0.087 Sum_probs=17.1
Q ss_pred CCcHHHHHhhceEEEEecCCCc
Q 045172 63 YGFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpq 84 (157)
..+-.+|+..|+.+-.++..+.
T Consensus 118 ~~~l~~l~~~g~~~~i~sn~~~ 139 (250)
T 3l5k_A 118 EKLIIHLRKHGIPFALATSSRS 139 (250)
T ss_dssp HHHHHHHHHTTCCEEEECSCCH
T ss_pred HHHHHHHHhCCCcEEEEeCCCH
Confidence 3455678888999999988874
No 300
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=50.22 E-value=9.6 Score=29.08 Aligned_cols=69 Identities=9% Similarity=0.083 Sum_probs=40.9
Q ss_pred CCCcHHHHHhh-ceEEEEecCCCcc-------------HHHHHHHHHHHHhhccCcceEEEEcCCcc--------hHHHH
Q 045172 62 GYGFADELKRA-WFWVRMVLVKPQD-------------ADVLLRNYMVAMVDKRRFGCLVVVSDDSD--------FVEVF 119 (157)
Q Consensus 62 gygla~eLrRA-Gv~V~~V~dkpqA-------------AD~AL~~~~~~~~~~r~v~clvLVSDDsD--------F~~~l 119 (157)
|--++.+|.+. |..|..+...|.. .|..=...+.+.+ .++|.++....... ...++
T Consensus 13 G~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~--~~~d~vi~~a~~~~~~~~~~~~~~~l~ 90 (289)
T 3e48_A 13 GTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAF--KGMDTVVFIPSIIHPSFKRIPEVENLV 90 (289)
T ss_dssp HHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHT--TTCSEEEECCCCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHH--hCCCEEEEeCCCCccchhhHHHHHHHH
Confidence 34456666666 7777766554431 2332223344444 48888888876532 24678
Q ss_pred HHHHHcCCeEEEE
Q 045172 120 QEATLRWLKMVVV 132 (157)
Q Consensus 120 r~Arer~l~tVVV 132 (157)
+.|++.|++.+|.
T Consensus 91 ~aa~~~gv~~iv~ 103 (289)
T 3e48_A 91 YAAKQSGVAHIIF 103 (289)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 8888888865554
No 301
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=50.21 E-value=20 Score=27.21 Aligned_cols=20 Identities=5% Similarity=-0.105 Sum_probs=14.3
Q ss_pred cHHHHHhh-ceEEEEecCCCc
Q 045172 65 FADELKRA-WFWVRMVLVKPQ 84 (157)
Q Consensus 65 la~eLrRA-Gv~V~~V~dkpq 84 (157)
+-..|+.. |+.+-.++..+.
T Consensus 122 ~L~~l~~~~g~~l~i~T~~~~ 142 (275)
T 2qlt_A 122 LCNALNALPKEKWAVATSGTR 142 (275)
T ss_dssp HHHHHHTSCGGGEEEECSSCH
T ss_pred HHHHHHhccCCeEEEEeCCCH
Confidence 34466777 888888887765
No 302
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=50.21 E-value=45 Score=23.45 Aligned_cols=15 Identities=13% Similarity=0.226 Sum_probs=7.3
Q ss_pred HHhhceEEEEecCCCc
Q 045172 69 LKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 69 LrRAGv~V~~V~dkpq 84 (157)
|+.. +.+-.++..|.
T Consensus 95 l~~~-~~~~i~s~~~~ 109 (209)
T 2hdo_A 95 LPSE-LRLGIVTSQRR 109 (209)
T ss_dssp SCTT-SEEEEECSSCH
T ss_pred HHhc-CcEEEEeCCCH
Confidence 3444 55555555543
No 303
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=50.13 E-value=32 Score=24.43 Aligned_cols=66 Identities=15% Similarity=-0.015 Sum_probs=40.9
Q ss_pred CCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC--CchHHHhhhhccc-chhhh
Q 045172 81 VKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM--SDGALKRIANAFF-SWSDL 153 (157)
Q Consensus 81 dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~--~~~~L~r~AD~~f-sW~ev 153 (157)
.||. -.....+.+.+ ....+-.+.|.| + ..+ +..|+..|++++.|..+ ....++..||.-+ ++.|+
T Consensus 154 ~kp~---~~~~~~~~~~~-~~~~~~~~~vGD-~-~~D-i~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el 222 (233)
T 3umb_A 154 YKTA---PAAYALAPRAF-GVPAAQILFVSS-N-GWD-ACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDL 222 (233)
T ss_dssp CTTS---HHHHTHHHHHH-TSCGGGEEEEES-C-HHH-HHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred CCcC---HHHHHHHHHHh-CCCcccEEEEeC-C-HHH-HHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHH
Confidence 3555 45566666666 344455556654 4 455 58899999999998654 2344556677655 45554
No 304
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=50.07 E-value=43 Score=26.56 Aligned_cols=64 Identities=19% Similarity=0.218 Sum_probs=53.2
Q ss_pred CcHHHHHh-hceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC-------CcchHHHHHHHHHcCCeEEE
Q 045172 64 GFADELKR-AWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD-------DSDFVEVFQEATLRWLKMVV 131 (157)
Q Consensus 64 gla~eLrR-AGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD-------DsDF~~~lr~Arer~l~tVV 131 (157)
|=+.-|.+ +|+.|..|...|.--| -++.+++.+..|+.++--.| +.|=-.+.|.|-+.++-.+.
T Consensus 63 gTa~~L~e~~Gl~v~~v~k~~eGG~----pqI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~T 134 (178)
T 1vmd_A 63 TTGALLQEKLGLKVHRLKSGPLGGD----QQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAI 134 (178)
T ss_dssp HHHHHHHHHHCCCCEECSCGGGTHH----HHHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEES
T ss_pred HHHHHHHHHhCceeEEEeecCCCCC----chHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEe
Confidence 55788999 9999999977676444 37899998999999999998 67888999999999887653
No 305
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=50.01 E-value=40 Score=26.42 Aligned_cols=68 Identities=13% Similarity=0.123 Sum_probs=43.8
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|.+|-+.|..|-.+...+......+ .+.+...+..+.++..|=+|...+-+.+.+- ++..+|-
T Consensus 59 IG~aia~~la~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 131 (291)
T 3ijr_A 59 IGRAVSIAFAKEGANIAIAYLDEEGDANET----KQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVN 131 (291)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHHHH----HHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCchHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 347788999999999987655544222222 2233356778888888888877665554432 5666653
No 306
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=49.97 E-value=15 Score=27.17 Aligned_cols=33 Identities=15% Similarity=0.237 Sum_probs=25.4
Q ss_pred cceEEEEcCCc-----chHHHHHHHHHcCCeEEEEcCC
Q 045172 103 FGCLVVVSDDS-----DFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 103 v~clvLVSDDs-----DF~~~lr~Arer~l~tVVVGd~ 135 (157)
-..+||+||-. +...+++.+++.|++.++||=+
T Consensus 110 ~~~iillTDG~~~~~~~~~~~~~~~~~~gi~i~~igig 147 (213)
T 1pt6_A 110 KKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAIL 147 (213)
T ss_dssp EEEEEEEESSCCSCSHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred CeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEec
Confidence 45789999832 3567889999999988887765
No 307
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=49.68 E-value=47 Score=23.27 Aligned_cols=66 Identities=14% Similarity=0.139 Sum_probs=40.0
Q ss_pred cCCCcHHHHHhhceEEEEecCCCc-cHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQ-DADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpq-AAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
+|..++.+|.+.|+.|..+...|. .++ .+.+.. ..|+. ++.-|-+| .+.++.|.-.+...|++.-.
T Consensus 14 vG~~la~~L~~~g~~V~vid~~~~~~~~-----~~~~~~-~~~~~--~i~gd~~~-~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 14 LAINTILQLNQRGQNVTVISNLPEDDIK-----QLEQRL-GDNAD--VIPGDSND-SSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCHHHHH-----HHHHHH-CTTCE--EEESCTTS-HHHHHHHTTTTCSEEEECSS
T ss_pred HHHHHHHHHHHCCCCEEEEECCChHHHH-----HHHHhh-cCCCe--EEEcCCCC-HHHHHHcChhhCCEEEEecC
Confidence 345588899999999998876543 111 122222 34544 34455555 45677776677888887644
No 308
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=49.28 E-value=65 Score=24.34 Aligned_cols=58 Identities=12% Similarity=-0.025 Sum_probs=43.3
Q ss_pred HHHHHHHhhccCcceEEEEcCCcch----HHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccch
Q 045172 91 RNYMVAMVDKRRFGCLVVVSDDSDF----VEVFQEATLRWLKMVVVGDMSDGALKRIANAFFSW 150 (157)
Q Consensus 91 ~~~~~~~~~~r~v~clvLVSDDsDF----~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fsW 150 (157)
...+.+.+ ..|-+..+|+|-|+-| ..+++.++++|..+.||-..| ....-.|-+.+||
T Consensus 84 ~~~i~~~~-~~g~~V~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiS-s~~aa~a~~g~pl 145 (232)
T 2qbu_A 84 ARMVAAEL-EDGRDVAFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVT-SFTACAATAGRTL 145 (232)
T ss_dssp HHHHHHHH-HTTCCEEEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCC-HHHHHHHHTTCCC
T ss_pred HHHHHHHH-HCCCeEEEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCcc-HHHHHHHHhCCCC
Confidence 34555555 4677888999988876 678899999999999998775 4555566777775
No 309
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=49.19 E-value=21 Score=25.83 Aligned_cols=36 Identities=17% Similarity=0.368 Sum_probs=30.4
Q ss_pred ccCcceEEE-EcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 100 KRRFGCLVV-VSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 100 ~r~v~clvL-VSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
..|...+|| |.|..++..+..+|++.|+.+.+|=|.
T Consensus 46 ~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DA 82 (115)
T 2zv3_A 46 REGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDA 82 (115)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred HCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 468899999 555588999999999999999888554
No 310
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=49.17 E-value=27 Score=23.55 Aligned_cols=43 Identities=9% Similarity=0.013 Sum_probs=29.8
Q ss_pred HHHHhhccCc-ceEEEEcCCcchHHHHH-HHHHcCCeEEEEcCCC
Q 045172 94 MVAMVDKRRF-GCLVVVSDDSDFVEVFQ-EATLRWLKMVVVGDMS 136 (157)
Q Consensus 94 ~~~~~~~r~v-~clvLVSDDsDF~~~lr-~Arer~l~tVVVGd~~ 136 (157)
+.+.+...|+ ++-+.|...+--..+++ .|++.+...||+|-..
T Consensus 74 ~~~~~~~~g~~~~~~~~~~g~~~~~I~~~~a~~~~~dliV~G~~~ 118 (146)
T 3s3t_A 74 RQQFVATTSAPNLKTEISYGIPKHTIEDYAKQHPEIDLIVLGATG 118 (146)
T ss_dssp HHHHHTTSSCCCCEEEEEEECHHHHHHHHHHHSTTCCEEEEESCC
T ss_pred HHHHHHhcCCcceEEEEecCChHHHHHHHHHhhcCCCEEEECCCC
Confidence 3334435677 55444444456778899 8999999999999763
No 311
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=49.16 E-value=18 Score=30.36 Aligned_cols=37 Identities=5% Similarity=-0.084 Sum_probs=30.1
Q ss_pred ccCcceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCCC
Q 045172 100 KRRFGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 100 ~r~v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~~ 136 (157)
+.+...|++++.|. .+.+++++.+++|-++++|++..
T Consensus 270 d~~~pvi~~~~~~~~~~~~~~~~l~~~g~~vi~i~~~~ 307 (366)
T 3knz_A 270 NAQSALIMLDPQPDARQDRLAQILGEWTPSIYRIGPQV 307 (366)
T ss_dssp CTTEEEEEECSSCCHHHHHHHHHHHHHCSCEEEEESSS
T ss_pred CCCceEEEEecCchHHHHHHHHHHHHcCCeEEEEecCC
Confidence 45668888888765 46789999999999999999863
No 312
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, cell CELL membrane, endoplasmic reticulum, glycoprotein, ION TRA ionic channel; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 3o2j_A* 2wjw_A* 2wjx_A 3n6v_A
Probab=49.16 E-value=28 Score=27.80 Aligned_cols=67 Identities=7% Similarity=0.103 Sum_probs=35.4
Q ss_pred HHHHhhceEEEEecC-CCc--cHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCe----EEEEcC
Q 045172 67 DELKRAWFWVRMVLV-KPQ--DADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLK----MVVVGD 134 (157)
Q Consensus 67 ~eLrRAGv~V~~V~d-kpq--AAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~----tVVVGd 134 (157)
.++.+.|..|-.... .+. +.|......+..+. ..+.+.|++.+...+...+++.|++.|+. +.++++
T Consensus 142 ~~~~~~g~~v~~~~~~~~~~~~~~~d~~~~l~~i~-~~~~~vii~~~~~~~~~~~~~qa~~~g~~~~~~~~i~~~ 215 (376)
T 3hsy_A 142 DSAAEKKWQVTAINVGNINNDKKDETYRSLFQDLE-LKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN 215 (376)
T ss_dssp HHHHHHTCEEEEEECTTCC---------------------CEEEEESCHHHHHHHHHHHHHHTSSGGGCEEEECS
T ss_pred HHhhhcCCeEEEEEeccccccccchhHHHHHHHHh-hCCCeEEEEECCHHHHHHHHHHHHHcccCCCCcEEEEcC
Confidence 456677876654322 111 12233334444444 56789999999999999999999999984 345555
No 313
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=49.13 E-value=23 Score=29.91 Aligned_cols=74 Identities=19% Similarity=0.262 Sum_probs=45.7
Q ss_pred CcccCCCcH-----HHHHhhceE-------EEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc
Q 045172 58 TPKVGYGFA-----DELKRAWFW-------VRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR 125 (157)
Q Consensus 58 ~pkvgygla-----~eLrRAGv~-------V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer 125 (157)
+|.+|||+. ..|...|.| |-.++-.++..+. ...+.+.|-..|+.+.+-.+ +..+..-++.|...
T Consensus 305 ~pa~Gf~igveRl~~~l~e~~~~~p~~p~~v~v~~~~~~~~~~--a~~l~~~Lr~~Gi~v~~d~~-~~~~~~~~~~a~~~ 381 (434)
T 1wu7_A 305 VPAVGFGMGDAVISLLLKRENVQIPREKKSVYICRVGKINSSI--MNEYSRKLRERGMNVTVEIM-ERGLSAQLKYASAI 381 (434)
T ss_dssp CCEEEEEEEHHHHHHHHHHTTCCCCCSSCEEEEEEESSCCHHH--HHHHHHHHHTTTCEEEECCS-CCCHHHHHHHHHHT
T ss_pred CCeEEEEEcHHHHHHHHHhcCCccCCCCCcEEEEEcChHHHHH--HHHHHHHHHHCCCeEEEecC-CCCHHHHHHHHHHC
Confidence 788998854 345554433 4444433332222 23444555467888766443 35799999999999
Q ss_pred CCeEE-EEcC
Q 045172 126 WLKMV-VVGD 134 (157)
Q Consensus 126 ~l~tV-VVGd 134 (157)
|...+ |||+
T Consensus 382 g~~~~iiiG~ 391 (434)
T 1wu7_A 382 GADFAVIFGE 391 (434)
T ss_dssp TCSEEEEEEH
T ss_pred CCCEEEEECc
Confidence 98765 4676
No 314
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=48.97 E-value=53 Score=21.44 Aligned_cols=76 Identities=8% Similarity=0.010 Sum_probs=44.3
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEEcCCCc--
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR--WLKMVVVGDMSD-- 137 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer--~l~tVVVGd~~~-- 137 (157)
.|...|.+.|+.|.++++..+| .+.+.....|++++=.+ +.+-.++++..++. ....+++++..+
T Consensus 22 ~l~~~L~~~~~~v~~~~~~~~a---------~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~ 92 (137)
T 3hdg_A 22 WLSTIISNHFPEVWSAGDGEEG---------ERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSEMK 92 (137)
T ss_dssp HHHHHHHTTCSCEEEESSHHHH---------HHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCCHH
T ss_pred HHHHHHHhcCcEEEEECCHHHH---------HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcChH
Confidence 4667777778888886654332 22223345666555332 34556778888875 466777777643
Q ss_pred ---hHHHhhhhccc
Q 045172 138 ---GALKRIANAFF 148 (157)
Q Consensus 138 ---~~L~r~AD~~f 148 (157)
.++...||-++
T Consensus 93 ~~~~~~~~g~~~~l 106 (137)
T 3hdg_A 93 YFIKAIELGVHLFL 106 (137)
T ss_dssp HHHHHHHHCCSEEC
T ss_pred HHHHHHhCCcceeE
Confidence 33445555555
No 315
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=48.74 E-value=17 Score=29.98 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=31.0
Q ss_pred ccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 100 KRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 100 ~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
+..-..|++++..+....+++.|++.|+++|+|-+.
T Consensus 2 ~~~~k~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~ 37 (425)
T 3vot_A 2 TKRNKNLAIICQNKHLPFIFEEAERLGLKVTFFYNS 37 (425)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHHTTCEEEEEEET
T ss_pred CCCCcEEEEECCChhHHHHHHHHHHCCCEEEEEECC
Confidence 345667899999999999999999999999999665
No 316
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=48.59 E-value=35 Score=24.07 Aligned_cols=43 Identities=19% Similarity=0.208 Sum_probs=29.8
Q ss_pred HHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 94 MVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 94 ~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
+.+.+...|+++-+.|...+-...+++.|++.+...||+|-..
T Consensus 92 ~~~~~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~g 134 (175)
T 2gm3_A 92 FVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRG 134 (175)
T ss_dssp HHHHHHHHTCEEEEEEEESCHHHHHHHHHHHHCCSEEEEEECC
T ss_pred HHHHHHHCCCceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCC
Confidence 3333334566654444444567889999999999999999763
No 317
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=48.15 E-value=22 Score=29.80 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=29.8
Q ss_pred ccCcceEEEEcCCcchHH---HHHHHHHcCCeEEEEcCC
Q 045172 100 KRRFGCLVVVSDDSDFVE---VFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 100 ~r~v~clvLVSDDsDF~~---~lr~Arer~l~tVVVGd~ 135 (157)
+.+...++++++|.-+.. ++++.+++|-++++|++.
T Consensus 274 d~~~pvi~~~~~d~~~~k~~~~~~e~~~rg~~vi~i~~~ 312 (372)
T 3tbf_A 274 DKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDK 312 (372)
T ss_dssp CTTCEEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred CCCCeEEEEecCCchHHHHHHHHHHHHHcCCeEEEEECC
Confidence 456789999999998875 567777799999999986
No 318
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=48.11 E-value=19 Score=27.13 Aligned_cols=65 Identities=9% Similarity=-0.053 Sum_probs=36.0
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHH-----------HHHHHHhhccCcceEEEEcCCcch-HHHHHHHHHcCCe
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLR-----------NYMVAMVDKRRFGCLVVVSDDSDF-VEVFQEATLRWLK 128 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~-----------~~~~~~~~~r~v~clvLVSDDsDF-~~~lr~Arer~l~ 128 (157)
..++.+|...|+ |..+...|...+.+.. .+.++.+.=.+.+.++..++|..- ..++..|++.+..
T Consensus 22 ~~la~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~ 98 (234)
T 2aef_A 22 LECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDES 98 (234)
T ss_dssp HHHHHHSTTSEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHhCCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCCC
Confidence 346888888898 8887666664433220 012211111356777766655432 2345677877654
No 319
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=48.02 E-value=4.4 Score=19.99 Aligned_cols=19 Identities=37% Similarity=0.693 Sum_probs=14.9
Q ss_pred CCCchhHHHHHHHhhhhhh
Q 045172 1 RFYNNDKLVNHFRQIHEGE 19 (157)
Q Consensus 1 ~f~t~~~L~kHFkqlHerE 19 (157)
.|.+...|..|...+|..|
T Consensus 11 ~f~~~~~l~~H~~~~H~~~ 29 (30)
T 1paa_A 11 AFTRRDLLIRHAQKIHSGN 29 (30)
T ss_dssp BCSSSHHHHHHHTTTSCCC
T ss_pred ccCChHHHHHHHHHHccCC
Confidence 3788899999977778654
No 320
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=47.91 E-value=38 Score=25.51 Aligned_cols=67 Identities=18% Similarity=0.236 Sum_probs=36.1
Q ss_pred HHHhhceEEEEecCCCc--------------------cHHHHHHHHHHHHhhccCcceEEEEcCCc--chHHHHHHHHHc
Q 045172 68 ELKRAWFWVRMVLVKPQ--------------------DADVLLRNYMVAMVDKRRFGCLVVVSDDS--DFVEVFQEATLR 125 (157)
Q Consensus 68 eLrRAGv~V~~V~dkpq--------------------AAD~AL~~~~~~~~~~r~v~clvLVSDDs--DF~~~lr~Arer 125 (157)
|....|+.|+-|.|... ..|.-|.+.|++.+++.|...+.|.-|.. ...++-|+....
T Consensus 21 evenqgyqvrdvndsdelkkemkklaeeknfekiliisndkqllkemlelisklgykvflllqdqdeneleefkrkiesq 100 (134)
T 2lci_A 21 EVENQGYQVRDVNDSDELKKEMKKLAEEKNFEKILIISNDKQLLKEMLELISKLGYKVFLLLQDQDENELEEFKRKIESQ 100 (134)
T ss_dssp HTTTTTCEEEEECSHHHHHHHHHHHHHCCSCCCEEEEESCHHHHHHHHHHHHHHTCCEEEEEECSCHHHHHHHHHHHHTT
T ss_pred HHHccCeeeeecCchHHHHHHHHHHHhhcCcceEEEEcCcHHHHHHHHHHHHHhCceeEEEeecCchhHHHHHHHHHHhC
Confidence 34456888988866322 23445555555665555555555554432 234444444445
Q ss_pred CCeEEEEcC
Q 045172 126 WLKMVVVGD 134 (157)
Q Consensus 126 ~l~tVVVGd 134 (157)
|..+--|-|
T Consensus 101 gyevrkvtd 109 (134)
T 2lci_A 101 GYEVRKVTD 109 (134)
T ss_dssp TCEEEEECC
T ss_pred CeeeeecCC
Confidence 555555544
No 321
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=47.80 E-value=17 Score=30.44 Aligned_cols=78 Identities=12% Similarity=0.088 Sum_probs=46.0
Q ss_pred HHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEE--EcCCcchH---HHHHHHHHcCCeEEE-EcCCCchH
Q 045172 66 ADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVV--VSDDSDFV---EVFQEATLRWLKMVV-VGDMSDGA 139 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvL--VSDDsDF~---~~lr~Arer~l~tVV-VGd~~~~~ 139 (157)
+.+|++-|=.|-.|.|+....-.-+...+.+.+...|+++.++ |..++++. .+++.+++.+...|| ||.++...
T Consensus 33 ~~~l~~~g~~~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D 112 (371)
T 1o2d_A 33 GNIIDLLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGGGSPMD 112 (371)
T ss_dssp GGGGGGTCSEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEEESHHHHH
T ss_pred HHHHHHcCCEEEEEECchHHhhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChHHHH
Confidence 3445555656666777644222225667777776678876655 45555554 455566666666666 88875444
Q ss_pred HHhh
Q 045172 140 LKRI 143 (157)
Q Consensus 140 L~r~ 143 (157)
+...
T Consensus 113 ~AK~ 116 (371)
T 1o2d_A 113 FAKA 116 (371)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 322
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=47.47 E-value=74 Score=23.42 Aligned_cols=77 Identities=13% Similarity=0.034 Sum_probs=46.0
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc-CCeEEEEcCCCc--
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR-WLKMVVVGDMSD-- 137 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer-~l~tVVVGd~~~-- 137 (157)
.+|...|.+.|+.|..+++..+|-+ .+.....|++++=-+ +.+=.++++..++. +...+++....+
T Consensus 19 ~~l~~~L~~~g~~v~~~~~~~~al~---------~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~~~~~~ 89 (238)
T 2gwr_A 19 EMLTIVLRGEGFDTAVIGDGTQALT---------AVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTV 89 (238)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGHHH---------HHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEETTCCS
T ss_pred HHHHHHHHHCCCEEEEECCHHHHHH---------HHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeCCCCHH
Confidence 4577788889999887766444322 222345676655332 33445677777764 677777765522
Q ss_pred ---hHHHhhhhccc
Q 045172 138 ---GALKRIANAFF 148 (157)
Q Consensus 138 ---~~L~r~AD~~f 148 (157)
.++...||-++
T Consensus 90 ~~~~~~~~Ga~~~l 103 (238)
T 2gwr_A 90 DVVLGLESGADDYI 103 (238)
T ss_dssp CHHHHHHTTCCEEE
T ss_pred HHHHHHHCCCCEEE
Confidence 34555666555
No 323
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=47.39 E-value=16 Score=25.21 Aligned_cols=76 Identities=14% Similarity=0.049 Sum_probs=43.2
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcce--EEEEcCC----------cchHHHHHHHHHcCCeEE
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGC--LVVVSDD----------SDFVEVFQEATLRWLKMV 130 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~c--lvLVSDD----------sDF~~~lr~Arer~l~tV 130 (157)
..+-..|+..|+.+-.++..|...=. .+ ...|++. -.+++++ ......++.. ..-.++
T Consensus 85 ~~~l~~l~~~g~~~~i~t~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~i 154 (201)
T 4ap9_A 85 RELVETLREKGFKVVLISGSFEEVLE----PF----KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFIL 154 (201)
T ss_dssp HHHHHHHHHTTCEEEEEEEEETTTSG----GG----TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCEE
T ss_pred HHHHHHHHHCCCeEEEEeCCcHHHHH----HH----HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--CcCcEE
Confidence 44567889999999888877662111 11 1223332 2333222 2344555544 455788
Q ss_pred EEcCC-CchHHHhhhhccc
Q 045172 131 VVGDM-SDGALKRIANAFF 148 (157)
Q Consensus 131 VVGd~-~~~~L~r~AD~~f 148 (157)
.|||+ +|-...+.|...+
T Consensus 155 ~iGD~~~Di~~~~~ag~~v 173 (201)
T 4ap9_A 155 AMGDGYADAKMFERADMGI 173 (201)
T ss_dssp EEECTTCCHHHHHHCSEEE
T ss_pred EEeCCHHHHHHHHhCCceE
Confidence 99998 6656666666544
No 324
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=47.36 E-value=28 Score=25.01 Aligned_cols=44 Identities=23% Similarity=0.208 Sum_probs=31.9
Q ss_pred cceEEEEcCC------cchHHHHHHHHHcCCeEEEEcCCC-------chHHHhhhhc
Q 045172 103 FGCLVVVSDD------SDFVEVFQEATLRWLKMVVVGDMS-------DGALKRIANA 146 (157)
Q Consensus 103 v~clvLVSDD------sDF~~~lr~Arer~l~tVVVGd~~-------~~~L~r~AD~ 146 (157)
-..+||+||- .+...+++.+++.|++.++||-+. ...|...|..
T Consensus 111 ~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~~~~~~~~~~L~~iA~~ 167 (198)
T 1n3y_A 111 AKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASK 167 (198)
T ss_dssp EEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCS
T ss_pred ceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEccccccccccHHHHHHHHcC
Confidence 3679999983 345788999999998877766542 2567777763
No 325
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=47.34 E-value=83 Score=25.47 Aligned_cols=66 Identities=29% Similarity=0.239 Sum_probs=42.8
Q ss_pred HHHHHhh-ce--EEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc----c---hHHHHHHH-HHcCCeEEEEcC
Q 045172 66 ADELKRA-WF--WVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS----D---FVEVFQEA-TLRWLKMVVVGD 134 (157)
Q Consensus 66 a~eLrRA-Gv--~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs----D---F~~~lr~A-rer~l~tVVVGd 134 (157)
|..|+.+ |- .|-.|+..|..++.+|..- + ..|+|-+++|+|+. | ++.+|..+ ++.+...|+.|.
T Consensus 46 A~~Lke~~g~~~~V~av~~G~~~~~~~lr~a----l-a~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~ 120 (264)
T 1o97_C 46 AMKIKESSDTDVEVVVVSVGPDRVDESLRKC----L-AKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGV 120 (264)
T ss_dssp HHHHHHHCSSCCEEEEEEESCGGGHHHHHHH----H-HTTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHhcCCCceEEEEEeCchhHHHHHHHH----H-hcCCCEEEEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 4455543 33 6777777776555555443 2 35999999999764 2 34455544 345889999998
Q ss_pred CC
Q 045172 135 MS 136 (157)
Q Consensus 135 ~~ 136 (157)
.+
T Consensus 121 ~s 122 (264)
T 1o97_C 121 QS 122 (264)
T ss_dssp CC
T ss_pred Cc
Confidence 74
No 326
>1q16_A Respiratory nitrate reductase 1 alpha chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 3ir7_A* 1y5i_A* 1siw_A* 1y4z_A* 1r27_A* 1y5l_A* 1y5n_A* 3ir6_A* 3ir5_A* 3egw_A*
Probab=47.14 E-value=23 Score=35.29 Aligned_cols=48 Identities=10% Similarity=0.161 Sum_probs=36.8
Q ss_pred cCcceEEEEcCCc-----chHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccc
Q 045172 101 RRFGCLVVVSDDS-----DFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 101 r~v~clvLVSDDs-----DF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
...+||+++..+. -....+..||++|.+.|||.=. .......||.|++
T Consensus 245 ~~ad~iv~wGsN~~~t~~~~~~~l~~ar~~G~KvVvIDPr-~t~ta~~AD~wl~ 297 (1247)
T 1q16_A 245 YNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPD-YAEIAKLCDLWLA 297 (1247)
T ss_dssp GGCSEEEEESCCHHHHSGGGHHHHHHHGGGTCEEEEECSS-CCHHHHHSSEEEC
T ss_pred hhCCEEEEECCCchhccHHHHHHHHHHHHCCCEEEEEeCC-CCcchhhCCeEEe
Confidence 4578999998884 2335678899999999999754 2356789999985
No 327
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=46.96 E-value=47 Score=23.44 Aligned_cols=19 Identities=16% Similarity=0.193 Sum_probs=11.8
Q ss_pred cHHHHHhhceEEEEecCCCc
Q 045172 65 FADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpq 84 (157)
+-..|+.. +.+-.++..+.
T Consensus 111 ~l~~l~~~-~~~~i~t~~~~ 129 (238)
T 3ed5_A 111 LISNLQQQ-FDLYIVTNGVS 129 (238)
T ss_dssp HHHHHHTT-SEEEEEECSCH
T ss_pred HHHHHHhc-CeEEEEeCCCH
Confidence 33456666 77777776664
No 328
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=46.77 E-value=43 Score=27.02 Aligned_cols=72 Identities=11% Similarity=-0.008 Sum_probs=41.2
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|.+|-+.|..|......+...+..-...+.+.+...+..+.++..|=+|-..+-+.+.+- ++..+|-
T Consensus 17 IG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVn 93 (324)
T 3u9l_A 17 FGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIH 93 (324)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35678899999999998643333222222222333333344667777777777766555444432 6766653
No 329
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=46.75 E-value=16 Score=28.28 Aligned_cols=20 Identities=5% Similarity=-0.032 Sum_probs=16.9
Q ss_pred HHHHHhhceEEEEecCCCcc
Q 045172 66 ADELKRAWFWVRMVLVKPQD 85 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpqA 85 (157)
-..|+..|+.+-.++.+|..
T Consensus 197 L~~L~~~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 197 SKMYALMGYQIVVVSGRESG 216 (301)
T ss_dssp HHHHHHTTCEEEEEECSCCC
T ss_pred HHHHHHCCCeEEEEeCCCcc
Confidence 35788999999999999973
No 330
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=46.39 E-value=12 Score=35.52 Aligned_cols=36 Identities=17% Similarity=0.075 Sum_probs=27.6
Q ss_pred hHHHHHHHHHcCCeEEEEcCC-CchHHHhhhhcccch
Q 045172 115 FVEVFQEATLRWLKMVVVGDM-SDGALKRIANAFFSW 150 (157)
Q Consensus 115 F~~~lr~Arer~l~tVVVGd~-~~~~L~r~AD~~fsW 150 (157)
=..+++..+++|-.+..+||+ +|-.--+.||+.+.-
T Consensus 569 K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAm 605 (885)
T 3b8c_A 569 KYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAV 605 (885)
T ss_dssp HHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCC
T ss_pred HHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEe
Confidence 345677778889889999999 776556678888753
No 331
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=46.31 E-value=7.2 Score=27.57 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=19.3
Q ss_pred CCcchHHHHHHHHHcCCeEEEEc
Q 045172 111 DDSDFVEVFQEATLRWLKMVVVG 133 (157)
Q Consensus 111 DDsDF~~~lr~Arer~l~tVVVG 133 (157)
.+.++..+.+.+.+.++..+|||
T Consensus 36 ~~~~~~~l~~li~e~~v~~iVvG 58 (98)
T 1iv0_A 36 LEEDVEALLDFVRREGLGKLVVG 58 (98)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEEe
Confidence 35667788888899999999999
No 332
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=46.11 E-value=52 Score=26.00 Aligned_cols=42 Identities=17% Similarity=0.132 Sum_probs=29.8
Q ss_pred HHHHHHHH-HHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEE
Q 045172 88 VLLRNYMV-AMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVV 132 (157)
Q Consensus 88 ~AL~~~~~-~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVV 132 (157)
.-|+.|.+ +.+...+++-+++|+++... ...+...|++.+..
T Consensus 26 kPli~~~i~~~~~~~~~~~vvVvt~~~~i---~~~~~~~g~~v~~~ 68 (253)
T 4fcu_A 26 RPMILRVVDQAKKVEGFDDLCVATDDERI---AEICRAEGVDVVLT 68 (253)
T ss_dssp EEHHHHHHHHHHTCTTCCEEEEEESCHHH---HHHHHTTTCCEEEC
T ss_pred eEhHHHHHHHHHHhcCCCEEEEECCHHHH---HHHHHHcCCeEEEe
Confidence 34788888 88766689999999987443 34455678887654
No 333
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=46.06 E-value=50 Score=25.35 Aligned_cols=67 Identities=13% Similarity=0.071 Sum_probs=43.2
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVV 131 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVV 131 (157)
+|..+|.+|-+.|..|-.+...+...-..+...+ ...+..+..+..|-+|...+-+.+.+- .+..+|
T Consensus 30 IG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 101 (270)
T 3is3_A 30 IGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI----KALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAV 101 (270)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH----HHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH----HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3467889999999999876444432222233332 245777888888888887766655543 565555
No 334
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=45.81 E-value=26 Score=25.87 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=31.5
Q ss_pred cceEEEEcCCc-------chHHHHHHHHHcCCeEEEEcCC---CchHHHhhhh
Q 045172 103 FGCLVVVSDDS-------DFVEVFQEATLRWLKMVVVGDM---SDGALKRIAN 145 (157)
Q Consensus 103 v~clvLVSDDs-------DF~~~lr~Arer~l~tVVVGd~---~~~~L~r~AD 145 (157)
...+||+||-. +.....+.+++.|++.++||-+ +...|.+.|.
T Consensus 116 ~~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~~~~~~~L~~iA~ 168 (202)
T 1ijb_A 116 SRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPHANLKQIRLIEK 168 (202)
T ss_dssp EEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTTSCHHHHHHHHH
T ss_pred CeEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCCcCCHHHHHHHhC
Confidence 46799999842 5677888999999987766654 3367877774
No 335
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=45.77 E-value=60 Score=21.11 Aligned_cols=64 Identities=3% Similarity=-0.036 Sum_probs=37.7
Q ss_pred CcHHHHHh-hceE-EEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHH----cCCeEEEEcCC
Q 045172 64 GFADELKR-AWFW-VRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATL----RWLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrR-AGv~-V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Are----r~l~tVVVGd~ 135 (157)
.|...|.+ .|+. |.++++..+| .+.+.....|.+++=.+ +.+-.++++..++ .+...|++++.
T Consensus 23 ~l~~~L~~~~~~~~v~~~~~~~~a---------~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 93 (143)
T 3cnb_A 23 MLTQFLENLFPYAKIKIAYNPFDA---------GDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGA 93 (143)
T ss_dssp HHHHHHHHHCTTCEEEEECSHHHH---------HHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESS
T ss_pred HHHHHHHhccCccEEEEECCHHHH---------HHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCC
Confidence 45667777 7888 7776553332 22333445666655433 3344567777776 45677777776
Q ss_pred C
Q 045172 136 S 136 (157)
Q Consensus 136 ~ 136 (157)
.
T Consensus 94 ~ 94 (143)
T 3cnb_A 94 L 94 (143)
T ss_dssp C
T ss_pred C
Confidence 3
No 336
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=45.73 E-value=14 Score=29.76 Aligned_cols=68 Identities=12% Similarity=-0.066 Sum_probs=44.1
Q ss_pred cHHHHHhhceEEEEec-CCCccHHHHHHHHHHHHhhccCcceEEEEcCC-cchHHHHHHHHHcCCeEEEEcCC
Q 045172 65 FADELKRAWFWVRMVL-VKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD-SDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 65 la~eLrRAGv~V~~V~-dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD-sDF~~~lr~Arer~l~tVVVGd~ 135 (157)
+...+++.|+.|-... -.+...|.. ..+.++. ..+.|.|++.+.. .+...+++.+++.|++..++|..
T Consensus 184 ~~~~~~~~g~~vv~~~~~~~~~~d~~--~~l~~i~-~~~~d~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 253 (419)
T 3h5l_A 184 IRDGAGEYGYDVSLFETVAIPVSDWG--PTLAKLR-ADPPAVIVVTHFYPQDQALFMNQFMTDPTNSLVYLQY 253 (419)
T ss_dssp HHHHGGGGTCEEEEEEECCSSCSCCH--HHHHHHH-HSCCSEEEECCCCHHHHHHHHHHHTTSCCSCEEEECS
T ss_pred HHHHHHHcCCeEEEEecCCCCCccHH--HHHHHHH-hcCCCEEEEccccCchHHHHHHHHHHcCCCceEEecC
Confidence 3456677887765432 233344432 2233333 5688888887655 57899999999999988887653
No 337
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=45.61 E-value=97 Score=23.51 Aligned_cols=67 Identities=7% Similarity=-0.053 Sum_probs=44.7
Q ss_pred cHHHHHhhceEEEEecC--------------------CCc--cHHHHHHHHHHHHhhccCcceEEEEcCC--c-------
Q 045172 65 FADELKRAWFWVRMVLV--------------------KPQ--DADVLLRNYMVAMVDKRRFGCLVVVSDD--S------- 113 (157)
Q Consensus 65 la~eLrRAGv~V~~V~d--------------------kpq--AAD~AL~~~~~~~~~~r~v~clvLVSDD--s------- 113 (157)
+...|+..|+.+-.+.- .|. .+.+...+.+++.+...|++.+++.+-. .
T Consensus 56 ~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~ 135 (290)
T 3tva_A 56 FRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYS 135 (290)
T ss_dssp HHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHH
T ss_pred HHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHH
Confidence 56677888988877621 111 2345566677777778899999986531 1
Q ss_pred ----chHHHHHHHHHcCCeEEE
Q 045172 114 ----DFVEVFQEATLRWLKMVV 131 (157)
Q Consensus 114 ----DF~~~lr~Arer~l~tVV 131 (157)
.|..++..|.+.|++..+
T Consensus 136 ~~~~~l~~l~~~a~~~Gv~l~l 157 (290)
T 3tva_A 136 ELVRVTQDLLTHAANHGQAVHL 157 (290)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCEEEE
Confidence 266777888889986544
No 338
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=45.38 E-value=1.6 Score=32.06 Aligned_cols=32 Identities=19% Similarity=-0.174 Sum_probs=14.5
Q ss_pred cCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 101 RRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 101 r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.|+..+++.+ ...=.++.+.|++.|++ +||+.
T Consensus 93 ~g~~~i~i~~-~~~~~~l~~~a~~~Gi~--~igpn 124 (145)
T 2duw_A 93 IGAKTLWLQL-GVINEQAAVLAREAGLS--VVMDR 124 (145)
T ss_dssp HTCCEEECCT-TCCCHHHHHHHHTTTCE--EECSC
T ss_pred cCCCEEEEcC-ChHHHHHHHHHHHcCCE--EEcCC
Confidence 4554433332 22234555555555554 34544
No 339
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=45.09 E-value=6.3 Score=32.94 Aligned_cols=80 Identities=14% Similarity=0.134 Sum_probs=50.1
Q ss_pred hhhhhHhhhhHhhccchhhhhhhhhhhhhHHHHHHHHhhcCcccC-----CCcHHHHHhhceEEEEecCCCccHHHHHHH
Q 045172 18 GEQKKRSNQIESARGKVRVLLVGNYSIKMEKNKMAASAILTPKVG-----YGFADELKRAWFWVRMVLVKPQDADVLLRN 92 (157)
Q Consensus 18 rEr~Krl~rl~s~kG~rr~~~~~~~~~k~~kY~~Aar~~l~pkvg-----ygla~eLrRAGv~V~~V~dkpqAAD~AL~~ 92 (157)
.|+..-++.|++-.+.+|..| +..+..|. -+.+..| -.|+.-|+..||-|....|--. . .+.+
T Consensus 44 ~~~~~e~Y~m~~~~~~~r~aL----II~N~~f~-----~l~~R~G~~~Da~~L~~~f~~LGF~V~~~~dlt~-~--em~~ 111 (302)
T 3e4c_A 44 KQKSAEIYPIMDKSSRTRLAL----IICNEEFD-----SIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTA-S--DMTT 111 (302)
T ss_dssp HHHGGGBCCCCCTTTCCCEEE----EEECCSCS-----SSCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCH-H--HHHH
T ss_pred HhccccccccCCCCCCccEEE----EEECcCCC-----CCCCCCCcHHHHHHHHHHHHHCCCEEEEeeCCCH-H--HHHH
Confidence 356666777777766566533 34555664 2566666 6799999999999999888554 2 3333
Q ss_pred HHHHHh---hccCcceEEEE
Q 045172 93 YMVAMV---DKRRFGCLVVV 109 (157)
Q Consensus 93 ~~~~~~---~~r~v~clvLV 109 (157)
-+.+.. +..+.||+++|
T Consensus 112 ~l~~f~~~~dh~~~d~~vv~ 131 (302)
T 3e4c_A 112 ELEAFAHRPEHKTSDSTFLV 131 (302)
T ss_dssp HHHHHHTCGGGGGCSCEEEE
T ss_pred HHHHHHhhhccCCCCEEEEE
Confidence 333332 33456777643
No 340
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=45.06 E-value=48 Score=26.80 Aligned_cols=19 Identities=11% Similarity=-0.029 Sum_probs=16.0
Q ss_pred CCcHHHHHhhceEEEEecC
Q 045172 63 YGFADELKRAWFWVRMVLV 81 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~d 81 (157)
.+++.++++.|+.|-.+..
T Consensus 20 ~~~~~a~~~~G~~~v~v~~ 38 (403)
T 4dim_A 20 LGLYKAAKELGIHTIAGTM 38 (403)
T ss_dssp HHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEcC
Confidence 4588999999999999854
No 341
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=45.05 E-value=36 Score=24.58 Aligned_cols=65 Identities=22% Similarity=0.203 Sum_probs=32.5
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhh-ccCcceEEEEcCCcchH-----HHHHHHHHcCCeEEEEcCC
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVD-KRRFGCLVVVSDDSDFV-----EVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~-~r~v~clvLVSDDsDF~-----~~lr~Arer~l~tVVVGd~ 135 (157)
+-.+|+..|+.+-.++..|..+ ...++.+. ..-++.+ +.|++.... .+...+++-|+..++|||+
T Consensus 103 ~l~~l~~~g~~~~i~Tn~~~~~-----~~~l~~~gl~~~f~~~-~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~vgD~ 173 (220)
T 2zg6_A 103 FLEGLKSNGYKLALVSNASPRV-----KTLLEKFDLKKYFDAL-ALSYEIKAVKPNPKIFGFALAKVGYPAVHVGDI 173 (220)
T ss_dssp HHHHHHTTTCEEEECCSCHHHH-----HHHHHHHTCGGGCSEE-C-----------CCHHHHHHHHHCSSEEEEESS
T ss_pred HHHHHHHCCCEEEEEeCCcHHH-----HHHHHhcCcHhHeeEE-EeccccCCCCCCHHHHHHHHHHcCCCeEEEcCC
Confidence 4566888999999999887522 22332221 0113433 334443221 1223334456666999998
No 342
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=45.04 E-value=55 Score=25.32 Aligned_cols=68 Identities=18% Similarity=0.053 Sum_probs=42.9
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH---c--CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL---R--WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are---r--~l~tVVV 132 (157)
+|..+|.+|-+.|..|-.+...+...-..+...+. ..+..+.++..|=+|...+-+.+.+ + ++..+|-
T Consensus 39 IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvn 111 (267)
T 3u5t_A 39 IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE----AAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVN 111 (267)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHH----HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH----hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 34778899999999998864544433333333332 3466778888888887766555443 2 5655553
No 343
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=44.90 E-value=19 Score=26.18 Aligned_cols=36 Identities=11% Similarity=0.115 Sum_probs=30.4
Q ss_pred ccCcceEEEEc-CCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 100 KRRFGCLVVVS-DDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 100 ~r~v~clvLVS-DDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
..|...+||=. |..++..+...|++.|+.+.+|=|.
T Consensus 51 ~~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DA 87 (120)
T 1xty_A 51 HQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDA 87 (120)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcC
Confidence 46889999955 5588999999999999999999664
No 344
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=44.90 E-value=37 Score=26.78 Aligned_cols=67 Identities=19% Similarity=0.140 Sum_probs=44.6
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|.+|-+.|..|-.+...+...+.+ .+.+...+..+.++..|=+|...+-+.+.+. ++..+|-
T Consensus 43 IG~~la~~l~~~G~~V~~~~r~~~~~~~~-----~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvn 114 (301)
T 3tjr_A 43 IGLATATEFARRGARLVLSDVDQPALEQA-----VNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFS 114 (301)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCHHHHHHH-----HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 45788999999999998876555433322 2223345778888888888877765555442 6666664
No 345
>3no4_A Creatininase, creatinine amidohydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.00A {Nostoc punctiforme pcc 73102}
Probab=44.88 E-value=17 Score=30.08 Aligned_cols=62 Identities=16% Similarity=0.305 Sum_probs=45.4
Q ss_pred hhcCcccCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHH
Q 045172 55 AILTPKVGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQ 120 (157)
Q Consensus 55 ~~l~pkvgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr 120 (157)
.++.|-+.||...+... | -=|++-.|.+. .++..++.+++...|+..||+|+..-.=...|+
T Consensus 76 ~~v~P~i~yG~s~~h~~--f-pGTisl~~~t~-~~~l~di~~sl~~~G~~~iv~vNgHGGN~~~l~ 137 (267)
T 3no4_A 76 AIVGPTINVGMALHHTA--F-PGTISLRPSTL-IQVVRDYVTCLAKAGFSKFYFINGHGGNIATLK 137 (267)
T ss_dssp CEECCCBCCCCCGGGTT--S-TTCBCCCHHHH-HHHHHHHHHHHHHHTCCEEEEEECCTTHHHHHH
T ss_pred cEEeCCEeecccccccC--C-CCeEEeCHHHH-HHHHHHHHHHHHHcCCCEEEEEECCcCcHHHHH
Confidence 57899999999887532 2 22445555443 678899999998999999999999866444433
No 346
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=44.85 E-value=54 Score=25.07 Aligned_cols=68 Identities=13% Similarity=0.064 Sum_probs=43.0
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH---c--CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL---R--WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are---r--~l~tVVV 132 (157)
+|..+|.+|-+.|..|-.+.+.+...-..+... +...+..+.++..|=+|...+-+.+.+ + ++..+|-
T Consensus 20 IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 92 (259)
T 3edm_A 20 IGRACAIRFAQEGANVVLTYNGAAEGAATAVAE----IEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVH 92 (259)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHH----HHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 357789999999999988745544222222222 224566788888888887766555443 2 5666653
No 347
>2ivf_A Ethylbenzene dehydrogenase alpha-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=44.75 E-value=24 Score=33.29 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=35.8
Q ss_pred cCcceEEEEcCC-----cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccc
Q 045172 101 RRFGCLVVVSDD-----SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 101 r~v~clvLVSDD-----sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
...+||+++..| ......+.+||++|.+.|||.=. .......||.|++
T Consensus 245 ~nad~Il~~G~N~~~~~p~~~~~~~~ar~~GakvivVDPr-~t~ta~~AD~wl~ 297 (976)
T 2ivf_A 245 LDAELIFMTCSNWSYTYPSSYHFLSEARYKGAEVVVIAPD-FNPTTPAADLHVP 297 (976)
T ss_dssp GGCSEEEEESCCHHHHCTTTHHHHHHHHHHTCEEEEECSS-CCTTGGGCSEEEC
T ss_pred hhCcEEEEeCCChhHcccHHHHHHHHHHHcCCEEEEECCC-CCcchhhcCeEec
Confidence 456999999776 23456688999999999999654 1234678999874
No 348
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=44.70 E-value=33 Score=25.53 Aligned_cols=72 Identities=11% Similarity=0.089 Sum_probs=40.4
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHH-------------HHHHHhhccCcceEEEEcCCcchHH-HHHHHHH-c
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRN-------------YMVAMVDKRRFGCLVVVSDDSDFVE-VFQEATL-R 125 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~-------------~~~~~~~~r~v~clvLVSDDsDF~~-~lr~Are-r 125 (157)
+|..+|..|...|+.|..+...|+..+..-.. ..++...-.+.+.+++.++|....- ++..|+. .
T Consensus 11 ~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~ 90 (218)
T 3l4b_C 11 TAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDF 90 (218)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHc
Confidence 34567888888999888887767644321111 1121111235677777766655443 3445665 4
Q ss_pred CCeEEEE
Q 045172 126 WLKMVVV 132 (157)
Q Consensus 126 ~l~tVVV 132 (157)
+...+++
T Consensus 91 ~~~~iia 97 (218)
T 3l4b_C 91 GVKRVVS 97 (218)
T ss_dssp CCCEEEE
T ss_pred CCCeEEE
Confidence 5555544
No 349
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=44.67 E-value=64 Score=21.12 Aligned_cols=64 Identities=25% Similarity=0.228 Sum_probs=41.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHH----cCCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATL----RWLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Are----r~l~tVVVGd~ 135 (157)
..|...|.+.|+.|.++++..+ +.+.+.....|++++=.+ +.+=.++++..|+ .++..+++.+.
T Consensus 20 ~~l~~~l~~~g~~v~~~~~~~~---------a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 89 (140)
T 3grc_A 20 RLLNLMLEKGGFDSDMVHSAAQ---------ALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSAN 89 (140)
T ss_dssp HHHHHHHHHTTCEEEEECSHHH---------HHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTT
T ss_pred HHHHHHHHHCCCeEEEECCHHH---------HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecC
Confidence 3466778889999888765332 233334566776666332 3455677887776 46788888876
No 350
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=44.43 E-value=46 Score=28.71 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=46.2
Q ss_pred CcccCCCc-----HHHHHhhce---------EEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHH
Q 045172 58 TPKVGYGF-----ADELKRAWF---------WVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEAT 123 (157)
Q Consensus 58 ~pkvgygl-----a~eLrRAGv---------~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Ar 123 (157)
+|.+|+|+ ...|...|. .|-.++-.+.+-+.| ..+.+.+-+.|+.+.+-.+ +..+..-++.|.
T Consensus 342 ~pavGfaiGieRli~~L~e~g~~p~~~~~p~~V~Vi~~~~~~~~~A--~~la~~LR~~Gi~ve~d~~-~~sl~~q~k~A~ 418 (465)
T 3net_A 342 MPGVGISIGLTRLISRLLKAGILNTLPPTPAQVVVVNMQDELMPTY--LKVSQQLRQAGLNVITNFE-KRQLGKQFQAAD 418 (465)
T ss_dssp CCEEEEEEEHHHHHHHHHHTTSSCCCCSCSCCEEECCSCGGGHHHH--HHHHHHHHHTTCCEEECCS-CCCHHHHHHHHH
T ss_pred CceeeeeccHHHHHHHHHHcCCCCCcCCCCCeEEEEEcCHHHHHHH--HHHHHHHHHCCCEEEEEeC-CCCHHHHHHHHH
Confidence 59999884 444555553 344444444433333 3344445467888766544 356999999999
Q ss_pred HcCCeE-EEEcC
Q 045172 124 LRWLKM-VVVGD 134 (157)
Q Consensus 124 er~l~t-VVVGd 134 (157)
+.|... |+||+
T Consensus 419 ~~g~p~~iiiG~ 430 (465)
T 3net_A 419 KQGIRFCVIIGA 430 (465)
T ss_dssp HHTCCEEEECCH
T ss_pred HcCCCEEEEECc
Confidence 999976 45665
No 351
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=44.24 E-value=65 Score=25.44 Aligned_cols=51 Identities=12% Similarity=0.038 Sum_probs=42.2
Q ss_pred cHHHHHHHHHHHHhhccCcceEEEEcCCcc----hHHHHHHHHHcCCeEEEEcCC
Q 045172 85 DADVLLRNYMVAMVDKRRFGCLVVVSDDSD----FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 85 AAD~AL~~~~~~~~~~r~v~clvLVSDDsD----F~~~lr~Arer~l~tVVVGd~ 135 (157)
..|+...+.+.+.+...|++|=+=|++-+. ..++++.|.++|++.+|.|-+
T Consensus 16 ~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG 70 (169)
T 3trh_A 16 DSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAAG 70 (169)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECC
Confidence 578999999999999999999888877665 555666677799999888877
No 352
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=44.18 E-value=58 Score=24.93 Aligned_cols=68 Identities=16% Similarity=0.112 Sum_probs=42.9
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|..|-+.|..|-.+.+.....-..+... +...+..+.++..|=+|...+-+.+.+- .+..+|-
T Consensus 16 IG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 88 (258)
T 3oid_A 16 VGKAAAIRLAENGYNIVINYARSKKAALETAEE----IEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVN 88 (258)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 356788999999999988634433222222222 2245778888888888877766555443 5665553
No 353
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=44.15 E-value=1.1e+02 Score=24.61 Aligned_cols=66 Identities=17% Similarity=0.167 Sum_probs=42.8
Q ss_pred HHHHHhhce--EEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEc-CCc---c-----hHHHHHHH-HHcCCeEEEEc
Q 045172 66 ADELKRAWF--WVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVS-DDS---D-----FVEVFQEA-TLRWLKMVVVG 133 (157)
Q Consensus 66 a~eLrRAGv--~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVS-DDs---D-----F~~~lr~A-rer~l~tVVVG 133 (157)
|..|+.+|- .|-.|+..|..++.+|..- + ..|+|-+++|+ |+. . .+.+|..+ ++.+...|+.|
T Consensus 46 A~~Lke~g~~~~V~av~~G~~~a~~~lr~a----l-a~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~~~dlVl~G 120 (252)
T 1efp_B 46 AIRLKEKGQAEEIIAVSIGVKQAAETLRTA----L-AMGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAG 120 (252)
T ss_dssp HHHHHTTTSCSEEEEEEEESGGGHHHHHHH----H-HHTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHhcCCCceEEEEEeCChhHHHHHHHH----H-hcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 455655454 6777777776565565543 2 35999999999 652 2 34455444 34577899999
Q ss_pred CCC
Q 045172 134 DMS 136 (157)
Q Consensus 134 d~~ 136 (157)
..+
T Consensus 121 ~~s 123 (252)
T 1efp_B 121 KQA 123 (252)
T ss_dssp SCC
T ss_pred CCc
Confidence 874
No 354
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.00 E-value=7.9 Score=21.39 Aligned_cols=20 Identities=40% Similarity=0.786 Sum_probs=16.1
Q ss_pred CCCchhHHHHHHHhhhhhhh
Q 045172 1 RFYNNDKLVNHFRQIHEGEQ 20 (157)
Q Consensus 1 ~f~t~~~L~kHFkqlHerEr 20 (157)
.|.+...|..|.+.+|..|+
T Consensus 21 ~F~~~~~L~~H~~~~H~~~k 40 (47)
T 2epx_A 21 AFIQNTSLIRHWRYYHTGEK 40 (47)
T ss_dssp CBSSHHHHHHHHTTTTTTSC
T ss_pred hhCChHHHHHHhHhhcCCCC
Confidence 48899999999876787653
No 355
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=43.90 E-value=76 Score=22.29 Aligned_cols=63 Identities=17% Similarity=0.071 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC--CchHH-Hhhhhccc-chhhh
Q 045172 87 DVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM--SDGAL-KRIANAFF-SWSDL 153 (157)
Q Consensus 87 D~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~--~~~~L-~r~AD~~f-sW~ev 153 (157)
+-.....+.+.+ ....+-++.|-|.. .| +..|+..|+++|.|.-+ .+..+ +..||.-+ |..|+
T Consensus 144 ~~~~~~~~~~~l-gi~~~~~i~iGD~~--~D-i~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el 210 (226)
T 3mc1_A 144 KEDVIRYAMESL-NIKSDDAIMIGDRE--YD-VIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDEL 210 (226)
T ss_dssp HHHHHHHHHHHH-TCCGGGEEEEESSH--HH-HHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHH
T ss_pred CHHHHHHHHHHh-CcCcccEEEECCCH--HH-HHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHH
Confidence 355566666666 34444555666552 44 57899999999999643 33444 56778766 55554
No 356
>2v9y_A Phosphoribosylformylglycinamidine cyclo-ligase; multifunctional enzyme, structural genomics consortium, nucleotide-binding, purine biosynthesis; 2.10A {Homo sapiens}
Probab=43.88 E-value=80 Score=25.96 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=54.4
Q ss_pred hhhhhhhhhHHHHHHHHhhcCc-------c-cCCCcHHHHHh---hceEEEEecCC-Cc--cHHHHHHH---HHHHH--h
Q 045172 38 LVGNYSIKMEKNKMAASAILTP-------K-VGYGFADELKR---AWFWVRMVLVK-PQ--DADVLLRN---YMVAM--V 98 (157)
Q Consensus 38 ~~~~~~~k~~kY~~Aar~~l~p-------k-vgygla~eLrR---AGv~V~~V~dk-pq--AAD~AL~~---~~~~~--~ 98 (157)
+.+.+..-+..|.+++.+++.. - -+.||+..|.+ .|+-+..-.++ |- ........ .-.++ +
T Consensus 191 l~~~~~~p~~~~~~~~~~l~~~~~v~a~~DiS~GGL~~~L~ema~s~vg~~I~~~~iP~~~~~~~~~~~~~~~~~~~~~~ 270 (334)
T 2v9y_A 191 LGDLLLTPTRIYSHSLLPVLRSGHVKAFAHITGGGLLENIPRVLPEKLGVDLDAQTWRIPRVFSWLQQEGHLSEEEMART 270 (334)
T ss_dssp HHHHHTCCCCCCHHHHHHHHHTTCCCEEEECCTTHHHHHSGGGSCTTEEEEEEGGGSCCCHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHhhhhHHHHHHHHHHHhhCCceEEEeCCCCcHHHHHHHHhhcCeEEEEecccCCCcHHHHHHHHhcCCCHHHHHHH
Confidence 3344443344565555444421 1 12589888776 46655553332 22 11111110 11122 2
Q ss_pred hccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 99 DKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 99 ~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
++-|.+ +|++.+..+...+++.+++.|....+||..
T Consensus 271 ~~~g~g-ll~~v~~~~~~~~~~~l~~~g~~~~~IG~V 306 (334)
T 2v9y_A 271 FNCGVG-AVLVVSKEQTEQILRGIQQHKEEAWVIGSV 306 (334)
T ss_dssp CCTTEE-EEEEECGGGHHHHHHHHHHTTCCEEEEEEE
T ss_pred hCCCCC-EEEEECHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 367766 777777778888999999999998999964
No 357
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=43.88 E-value=17 Score=26.38 Aligned_cols=43 Identities=28% Similarity=0.334 Sum_probs=30.6
Q ss_pred ceEEEEcCCc------chHHHHHHHHHcCCeEEEEcCCC-------chHHHhhhhc
Q 045172 104 GCLVVVSDDS------DFVEVFQEATLRWLKMVVVGDMS-------DGALKRIANA 146 (157)
Q Consensus 104 ~clvLVSDDs------DF~~~lr~Arer~l~tVVVGd~~-------~~~L~r~AD~ 146 (157)
..+||+||-. +...+++.+++.|+++++||-+. ...|...|..
T Consensus 108 ~~iillTDG~~~~d~~~~~~~~~~~~~~gi~v~~igvG~~~~~~~~~~~L~~iA~~ 163 (194)
T 1mf7_A 108 KILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASK 163 (194)
T ss_dssp EEEEEEESSCCBSCSSCGGGTHHHHHHTTEEEEEEEESGGGCSHHHHHHHHHHSCS
T ss_pred eEEEEEcCCCCCCCchhhHHHHHHHHHCCCEEEEEEecccccccccHHHHHHHhCC
Confidence 5789999742 34678899999999888776552 2567766653
No 358
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=43.77 E-value=40 Score=23.27 Aligned_cols=36 Identities=11% Similarity=0.141 Sum_probs=27.2
Q ss_pred ccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 100 KRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 100 ~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
..|+++-+.|...+--..+++.|++.+...||+|-.
T Consensus 94 ~~g~~~~~~v~~G~~~~~I~~~a~~~~~dlIV~G~~ 129 (162)
T 1mjh_A 94 DVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSH 129 (162)
T ss_dssp HTTCEEEEEEEEECHHHHHHHHHHHTTCSEEEEESC
T ss_pred HcCCceEEEEcCCCHHHHHHHHHHHcCCCEEEEcCC
Confidence 457765444444456778999999999999999976
No 359
>3d8t_A Uroporphyrinogen-III synthase; heme biosynthesis, lyase; 1.60A {Thermus thermophilus} PDB: 3d8r_A 3d8s_A 3d8n_A
Probab=43.57 E-value=4.6 Score=32.17 Aligned_cols=97 Identities=11% Similarity=-0.032 Sum_probs=49.1
Q ss_pred hhhhHHHHHHH---Hh--hcCcccCCCcHHHHHhhceEEEEec---CCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-
Q 045172 43 SIKMEKNKMAA---SA--ILTPKVGYGFADELKRAWFWVRMVL---VKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS- 113 (157)
Q Consensus 43 ~~k~~kY~~Aa---r~--~l~pkvgygla~eLrRAGv~V~~V~---dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs- 113 (157)
+.+..+|++-- .. ++.|.-.-.|+..|+..|+.|-.+| -.|- ....|.. .++.+ ...+||||..|-..
T Consensus 20 ~~~~~w~e~~pL~G~~VlvtR~~~~~~l~~~L~~~G~~v~~~P~i~i~~~-~~~~l~~-~l~~l-~~~~d~lifTS~naV 96 (286)
T 3d8t_A 20 STENLYFQGIDPFTMRIAYAGLRRKEEFKALAEKLGFTPLLFPVQATEKV-PVPEYRD-QVREL-AQGVDLFLATTGVGV 96 (286)
T ss_dssp -------------CCEEEECCSSCHHHHHHHHHHHTCEEEECCCEEEEEE-ECTTHHH-HHHHH-TTCCSEEEECCHHHH
T ss_pred CccCccccCCCCCCCEEEEeCCCchHHHHHHHHHCCCeEEEeeeEEEecC-CHHHHHH-HHHhh-ccCCCEEEEECHHHH
Confidence 34666676532 12 3344434667888999999886543 1221 0112222 22224 24689999999765
Q ss_pred -chHHHHHHH-----HH-cCCeEEEEcCCCchHHHh
Q 045172 114 -DFVEVFQEA-----TL-RWLKMVVVGDMSDGALKR 142 (157)
Q Consensus 114 -DF~~~lr~A-----re-r~l~tVVVGd~~~~~L~r 142 (157)
-|...+... +. .+.+.++||..|..+|..
T Consensus 97 ~~~~~~l~~~~~~~~~~l~~~~i~aVG~~Ta~aL~~ 132 (286)
T 3d8t_A 97 RDLLEAGKALGLDLEGPLAKAFRLARGAKAARALKE 132 (286)
T ss_dssp HHHHHHHHHTTCCCHHHHHHSEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHcCchHHHHhcCCeEEEECHHHHHHHHH
Confidence 233333321 11 468899999987677765
No 360
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=43.56 E-value=70 Score=27.30 Aligned_cols=69 Identities=13% Similarity=0.132 Sum_probs=43.4
Q ss_pred HHHHHhhceEEEEec--CCCccHHHHH--HHHHHHHhhccCcceEEEEcCC-----cchHHHHHHHHHcCCeEEEEcCC
Q 045172 66 ADELKRAWFWVRMVL--VKPQDADVLL--RNYMVAMVDKRRFGCLVVVSDD-----SDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 66 a~eLrRAGv~V~~V~--dkpqAAD~AL--~~~~~~~~~~r~v~clvLVSDD-----sDF~~~lr~Arer~l~tVVVGd~ 135 (157)
...-+..|+.++.+. +.-.-++.|+ ...+...- ..+|-.|=|+++. ++|.++++.||+.|++.++=..+
T Consensus 142 ~~a~~~~gi~~rlI~~~~R~~~~e~a~~~~~~a~~~~-~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~Gl~~t~HAGE 219 (380)
T 4gxw_A 142 RDAARDFGIGARLIPSIDREQDPDEAVAIVDWMKANR-ADEVAGIGIDYRENDRPPELFWKAYRDARAAGFRTTAHAGE 219 (380)
T ss_dssp HHHHHHHCCEEEEEEEEETTSCHHHHHHHHHHHHHTC-CTTBCEEEEESCCTTCCGGGGHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHhcCCcEEEEEeecCCCCHHHHHHHHHHHHHhC-CCCEEEEeecCCCCCCCHHHHHHHHHHHHHcCCCeeeeccc
Confidence 334455688888772 1222223332 22333332 4578888899974 56999999999999998774443
No 361
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=43.49 E-value=46 Score=25.55 Aligned_cols=61 Identities=10% Similarity=0.052 Sum_probs=45.7
Q ss_pred HHHHHHHHHhhccCcceEEEEcCCcchH----HHHHHHHHcCCeEEEEcCCCchHHHhhhhcccchh
Q 045172 89 LLRNYMVAMVDKRRFGCLVVVSDDSDFV----EVFQEATLRWLKMVVVGDMSDGALKRIANAFFSWS 151 (157)
Q Consensus 89 AL~~~~~~~~~~r~v~clvLVSDDsDF~----~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fsW~ 151 (157)
.....+.+.+ ..|-+..+|+|-|+-|. .+++.+++.|..+.||-..| ....-.|-+.+||.
T Consensus 66 ~~~~~i~~~~-~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~v~viPGiS-s~~aa~a~~g~pl~ 130 (235)
T 1ve2_A 66 AITARLIALA-REGRVVARLKGGDPMVFGRGGEEALALRRAGIPFEVVPGVT-SAVGALSALGLPLT 130 (235)
T ss_dssp HHHHHHHHHH-HTTCEEEEEESBCTTSSTTHHHHHHHHHHHTCCEEEECCCC-TTHHHHHHTTCCSC
T ss_pred HHHHHHHHHH-HcCCeEEEEcCCCCCcccCHHHHHHHHHHCCCCEEEECCHh-HHHHHHHHcCCCcc
Confidence 3445566666 46778888999998764 57888899999999987775 45556778888883
No 362
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=43.48 E-value=72 Score=25.49 Aligned_cols=64 Identities=14% Similarity=0.082 Sum_probs=40.4
Q ss_pred HHHHHhhceEEE---Ee--cCCCccHHHHHHHHHHHHhhccCcceEEEEcC-CcchHHHHHHHHHcCCeEEEEcCC
Q 045172 66 ADELKRAWFWVR---MV--LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD-DSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 66 a~eLrRAGv~V~---~V--~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD-DsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.--.++-|+.+. .+ ...|.++|++ .+.+.+...+|.||+.=+- ++.-+..+ |++-|++++++ |.
T Consensus 185 ~Yf~~~yGl~~~~~~~~~~~~eps~~~l~---~l~~~ik~~~v~~if~e~~~~~~~~~~i--a~~~g~~v~~l-d~ 254 (284)
T 2prs_A 185 GYFEKQFGLTPLGHFTVNPEIQPGAQRLH---EIRTQLVEQKATCVFAEPQFRPAVVESV--ARGTSVRMGTL-DP 254 (284)
T ss_dssp HHHHHHHTCCCCEEEESSTTSCCCHHHHH---HHHHHHHHTTCCEEEECTTSCSHHHHHH--TTTSCCEEEEC-CT
T ss_pred HHHHHHCCCeEeEeeccCCCCCCCHHHHH---HHHHHHHHcCCCEEEEeCCCChHHHHHH--HHHcCCeEEEe-cc
Confidence 334555565433 22 2457777765 4445556789999877544 45555555 78899999876 54
No 363
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=43.42 E-value=1e+02 Score=23.22 Aligned_cols=42 Identities=0% Similarity=-0.080 Sum_probs=23.8
Q ss_pred HHHHHHHHHhhccCcceEEEEcCCc---------------chHHHHHHHHHcCCeEE
Q 045172 89 LLRNYMVAMVDKRRFGCLVVVSDDS---------------DFVEVFQEATLRWLKMV 130 (157)
Q Consensus 89 AL~~~~~~~~~~r~v~clvLVSDDs---------------DF~~~lr~Arer~l~tV 130 (157)
...+.+.+.+...|++++++.+-.. .+..++..|.+.|++..
T Consensus 84 ~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~ 140 (286)
T 3dx5_A 84 EKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVL 140 (286)
T ss_dssp HHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 3444555555567777777655321 14455666667777433
No 364
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=43.42 E-value=15 Score=29.54 Aligned_cols=60 Identities=12% Similarity=-0.058 Sum_probs=51.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL 124 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are 124 (157)
+.++.+.-+||..|- -+||-|.+.+=.+.|.+.....|+-+++.|.-.-.|.+..+.+++
T Consensus 81 ~~~~~~al~aGkhVl--~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~k~ 140 (337)
T 3ip3_A 81 GKILLEALERKIHAF--VEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKK 140 (337)
T ss_dssp HHHHHHHHHTTCEEE--ECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHHHH
T ss_pred HHHHHHHHHCCCcEE--EeCCCCCCHHHHHHHHHHHHHhCCceEEEecccccCCHHHHHHHH
Confidence 777888899998865 699999999999999999988888777888888889888888876
No 365
>3om0_A Glutamate receptor, ionotropic kainate 5; membrane protein, ION channel; HET: NAG BMA GOL; 1.40A {Rattus norvegicus} PDB: 3om1_A* 3qlu_A* 3qlv_A
Probab=43.31 E-value=26 Score=27.89 Aligned_cols=36 Identities=11% Similarity=0.134 Sum_probs=30.1
Q ss_pred ccCcceEEEEcCCcchHHHHHHHHHcCCe----EEEEcCC
Q 045172 100 KRRFGCLVVVSDDSDFVEVFQEATLRWLK----MVVVGDM 135 (157)
Q Consensus 100 ~r~v~clvLVSDDsDF~~~lr~Arer~l~----tVVVGd~ 135 (157)
..+.+.|++.+...+...+++.|++.|+. +.++++.
T Consensus 189 ~~~~~vii~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~~~ 228 (393)
T 3om0_A 189 DDKVSTIIIDANASISHLVLRKASELGMTSAFYKYILTTM 228 (393)
T ss_dssp HHTCSEEEEESCHHHHHHHHHHHHHTTTTSTTCEEEECCT
T ss_pred hcCCeEEEEECCHHHHHHHHHHHHHcCcccCCeEEEEecc
Confidence 56889999999999999999999999985 3456664
No 366
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=43.25 E-value=73 Score=21.40 Aligned_cols=64 Identities=6% Similarity=0.053 Sum_probs=39.5
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEEcCCC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR--WLKMVVVGDMS 136 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer--~l~tVVVGd~~ 136 (157)
.|...|.+.|+.|.++.+..+ | .+.+.....|++++=.+ +.+-.++++..++. ....|++.+..
T Consensus 29 ~l~~~L~~~g~~v~~~~~~~~----a-----~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 29 RLQQLLSPLPYTLHFARDATQ----A-----LQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHHTTSSCEEEEESSHHH----H-----HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHhcccCcEEEEECCHHH----H-----HHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 456677888998887655333 2 22333456776665332 34455677777764 67778887764
No 367
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=43.19 E-value=79 Score=22.47 Aligned_cols=63 Identities=13% Similarity=-0.014 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC--CchHHHh-hhhccc-chhhhh
Q 045172 88 VLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM--SDGALKR-IANAFF-SWSDLL 154 (157)
Q Consensus 88 ~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~--~~~~L~r-~AD~~f-sW~ev~ 154 (157)
-.....+.+.+ ....+-.+.|-|.. .=+..|+..|+.+|.|..+ ....+.. .||.-+ ++.|+.
T Consensus 163 ~~~~~~~~~~l-g~~~~~~i~vGD~~---~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~ 229 (237)
T 4ex6_A 163 PDMALHVARGL-GIPPERCVVIGDGV---PDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAV 229 (237)
T ss_dssp SHHHHHHHHHH-TCCGGGEEEEESSH---HHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHH
T ss_pred HHHHHHHHHHc-CCCHHHeEEEcCCH---HHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHH
Confidence 34555666655 34445556666654 4457789999999999765 2356666 788766 566653
No 368
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=43.14 E-value=21 Score=31.10 Aligned_cols=60 Identities=8% Similarity=0.092 Sum_probs=41.4
Q ss_pred eEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeE-EEEcCC
Q 045172 74 FWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKM-VVVGDM 135 (157)
Q Consensus 74 v~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~t-VVVGd~ 135 (157)
+.|-.++..+.+.+.|+ .+.+.|-+.|+.+-+...++..+..-++.|...|... ||||+.
T Consensus 420 ~~V~v~~~~~~~~~~a~--~l~~~Lr~~Gi~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~~ 480 (517)
T 4g85_A 420 TQVLVASAQKKLLEERL--KLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQ 480 (517)
T ss_dssp CCEEEEESSSSCHHHHH--HHHHHHHHTTCCEEECSSSSCCHHHHHHHHHHHCCCEEEEECHH
T ss_pred CEEEEEeCCHHHHHHHH--HHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECCh
Confidence 34555565555555554 3455555789988776666667999999999999875 567764
No 369
>1v7z_A Creatininase, creatinine amidohydrolase; Mn-activated creatininase, substrate complex; 1.60A {Pseudomonas SP} SCOP: c.125.1.1 PDB: 1j2u_A 1j2t_A 3a6d_A 3a6j_A 3a6k_A 3a6l_A 3a6g_A 3a6f_A 3a6e_A 3a6h_A 1q3k_A
Probab=42.99 E-value=47 Score=26.67 Aligned_cols=67 Identities=12% Similarity=0.098 Sum_probs=47.4
Q ss_pred hhcCcccCCC-----cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchH----HHHH-HHHH
Q 045172 55 AILTPKVGYG-----FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFV----EVFQ-EATL 124 (157)
Q Consensus 55 ~~l~pkvgyg-----la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~----~~lr-~Are 124 (157)
.++.|-+.|| .+.+-.. | -=|++-.|.+. .++..++.+++...|+..||+|...=.=. .+++ .++.
T Consensus 62 ~lv~P~i~yG~~~~~~s~~h~~--f-PGTisl~~~tl-~~~l~di~~sl~~~GfrrivivNgHGGN~~~l~~a~~~~l~~ 137 (260)
T 1v7z_A 62 ALVMPGLQYGYKSQQKSGGGNH--F-PGTTSLDGATL-TGTVQDIIRELARHGARRLVLMNGHYENSMFIVEGIDLALRE 137 (260)
T ss_dssp CEECCCBCCCBCCCHHHHSCTT--S-SSCBCBCHHHH-HHHHHHHHHHHHHHTCCEEEEEECSGGGHHHHHHHHHHHHHH
T ss_pred CEEECCccccCCCCCCCccccC--C-CceEEeCHHHH-HHHHHHHHHHHHHcCCCEEEEEcCCCCcHHHHHHHHHHHHHH
Confidence 4899999999 7766532 2 22556666544 58888999999999999999999865433 3345 5555
Q ss_pred c
Q 045172 125 R 125 (157)
Q Consensus 125 r 125 (157)
+
T Consensus 138 ~ 138 (260)
T 1v7z_A 138 L 138 (260)
T ss_dssp H
T ss_pred h
Confidence 4
No 370
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=42.94 E-value=22 Score=26.19 Aligned_cols=83 Identities=17% Similarity=0.061 Sum_probs=43.1
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCc-ceEEEEcCC-----cchHHHHHHHHHcCC----eEEEEcC
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRF-GCLVVVSDD-----SDFVEVFQEATLRWL----KMVVVGD 134 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v-~clvLVSDD-----sDF~~~lr~Arer~l----~tVVVGd 134 (157)
+-..|+..|+.+-.++..|...=..+..+. . + ..-+ +. +..+++ ++=..+...+..-|+ .+++|||
T Consensus 111 ~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~-~-~~~~~~~-~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD 186 (267)
T 1swv_A 111 VIASLRERGIKIGSTTGYTREMMDIVAKEA-A-L-QGYKPDF-LVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGD 186 (267)
T ss_dssp HHHHHHHTTCEEEEBCSSCHHHHHHHHHHH-H-H-TTCCCSC-CBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEES
T ss_pred HHHHHHHcCCeEEEEcCCCHHHHHHHHHHc-C-C-cccChHh-eecCCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeC
Confidence 345677889999999988752211111111 1 1 1111 22 222332 122333444444454 5899999
Q ss_pred C-CchHHHhhhh---cccchh
Q 045172 135 M-SDGALKRIAN---AFFSWS 151 (157)
Q Consensus 135 ~-~~~~L~r~AD---~~fsW~ 151 (157)
+ +|-...+.|. +++.|.
T Consensus 187 ~~nDi~~a~~aG~~~i~v~~~ 207 (267)
T 1swv_A 187 TVSDMKEGRNAGMWTVGVILG 207 (267)
T ss_dssp SHHHHHHHHHTTSEEEEECTT
T ss_pred CHHHHHHHHHCCCEEEEEcCC
Confidence 9 6555666677 455543
No 371
>1eu1_A Dimethyl sulfoxide reductase; molybdenum, molybdenum cofactor, DMSO, molybdopte oxidoreductase; HET: GLC MGD EPE; 1.30A {Rhodobacter sphaeroides} SCOP: b.52.2.2 c.81.1.1 PDB: 4dmr_A* 1dmr_A* 1e5v_A* 1h5n_A* 2dmr_A* 3dmr_A* 1e61_A* 1e60_A* 1e18_A* 1dms_A*
Probab=42.87 E-value=27 Score=31.71 Aligned_cols=48 Identities=6% Similarity=0.009 Sum_probs=35.0
Q ss_pred cCcceEEEEcCCcc-------------hHHHHHHHHHcCCeEEEEcCCCchHHHhhh-hcccc
Q 045172 101 RRFGCLVVVSDDSD-------------FVEVFQEATLRWLKMVVVGDMSDGALKRIA-NAFFS 149 (157)
Q Consensus 101 r~v~clvLVSDDsD-------------F~~~lr~Arer~l~tVVVGd~~~~~L~r~A-D~~fs 149 (157)
...+||+++..|.- ....++.|+++|.+.|||.=. .......| |.|++
T Consensus 176 ~~ad~il~~G~N~~~~~~~~~~~~~~~~~~~l~~a~~~G~klivIDPr-~t~ta~~aad~~l~ 237 (780)
T 1eu1_A 176 ENTDLMVFWAADPMKTNEIGWVIPDHGAYAGMKALKEKGTRVIAINPV-RTETADYFGADVVS 237 (780)
T ss_dssp HHCSEEEEESCCHHHHTTCCSSBCCCHHHHHHHHHHHHTCEEEEESSB-CCHHHHHHTCEEEC
T ss_pred hhCCEEEEECCCHHHhcCCCCcccccchHHHHHHHHHCCCeEEEECCC-CCCcccccCCEEee
Confidence 36799999987752 234678899999999999654 23455655 99985
No 372
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=42.86 E-value=31 Score=24.84 Aligned_cols=33 Identities=12% Similarity=-0.071 Sum_probs=25.6
Q ss_pred cceEEEEcCCcc-----hHHHHHHHHHcCCeEEEEcCC
Q 045172 103 FGCLVVVSDDSD-----FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 103 v~clvLVSDDsD-----F~~~lr~Arer~l~tVVVGd~ 135 (157)
-..+||+||-.. ...+++.+++.|+++++||-+
T Consensus 123 ~~~iillTDG~~~~~~~~~~~~~~l~~~gi~v~~igvG 160 (178)
T 2xgg_A 123 PKLVIGMTDGESDSDFRTVRAAKEIRELGGIVTVLAVG 160 (178)
T ss_dssp CEEEEEEESSCCCHHHHHSHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEcC
Confidence 368999998533 556788889999998888776
No 373
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=42.82 E-value=41 Score=27.72 Aligned_cols=75 Identities=15% Similarity=0.034 Sum_probs=46.1
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceE-EEEcCCcc---hHHHHHHHHHcCCeEEE-EcCCCchH
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCL-VVVSDDSD---FVEVFQEATLRWLKMVV-VGDMSDGA 139 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~cl-vLVSDDsD---F~~~lr~Arer~l~tVV-VGd~~~~~ 139 (157)
|..+|++-|=.|-.|.|+.... .+...+.+.+...|+++. +.++.++. ...+++.+++.+...|| ||.++...
T Consensus 23 l~~~l~~~g~~~livtd~~~~~--~~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~~~~~~~~~d~IIavGGGsv~D 100 (370)
T 1jq5_A 23 IANYLEGIGNKTVVIADEIVWK--IAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKTLD 100 (370)
T ss_dssp HHHHHTTTCSEEEEEECHHHHH--HTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHH
T ss_pred HHHHHHHcCCeEEEEEChHHHH--HHHHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHHHHHHhcCCCEEEEeCChHHHH
Confidence 3455566565566667754432 466777888866777763 44555543 45566777888887766 77764333
Q ss_pred HH
Q 045172 140 LK 141 (157)
Q Consensus 140 L~ 141 (157)
+.
T Consensus 101 ~a 102 (370)
T 1jq5_A 101 TA 102 (370)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 374
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=42.75 E-value=22 Score=26.18 Aligned_cols=67 Identities=9% Similarity=0.026 Sum_probs=44.9
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-----chHHHHHHHHHcCCeEE
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS-----DFVEVFQEATLRWLKMV 130 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs-----DF~~~lr~Arer~l~tV 130 (157)
|-+.-|+.+|+.|..|..-++-.+...-.++.+++.+..|+.++-..+.. |=-.+.|.|-+.|+-.+
T Consensus 58 GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~ 129 (143)
T 2yvq_A 58 ATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLL 129 (143)
T ss_dssp HHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEE
T ss_pred hHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeE
Confidence 44678999999999997654421100002478888889999999988762 44456677777776544
No 375
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=42.51 E-value=36 Score=28.26 Aligned_cols=67 Identities=12% Similarity=-0.011 Sum_probs=47.1
Q ss_pred HHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCC-----cchHHHHHHHHHcCCeEEEEcCCC
Q 045172 68 ELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD-----SDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 68 eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD-----sDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
....+|+.+-.|++.++-+|. ...+.+.+...|+++.+.++|- ..+..+++.+.+.|+..|.+.|.+
T Consensus 101 ~a~~aGvd~v~I~~~~s~~~~--~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~ 172 (345)
T 1nvm_A 101 NAYQAGARVVRVATHCTEADV--SKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSG 172 (345)
T ss_dssp HHHHHTCCEEEEEEETTCGGG--GHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTT
T ss_pred HHHhCCcCEEEEEEeccHHHH--HHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCc
Confidence 344578877777765543343 3455556667899999999443 345677888888999999999985
No 376
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=42.43 E-value=61 Score=24.66 Aligned_cols=68 Identities=12% Similarity=-0.040 Sum_probs=41.7
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|.+|-+.|..|-.........-..+...+ ...+..+.++..|=+|...+-+.+.+- .+..+|-
T Consensus 38 IG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l----~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~ 110 (267)
T 4iiu_A 38 IGRAIARQLAADGFNIGVHYHRDAAGAQETLNAI----VANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVS 110 (267)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH----HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH----HhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEE
Confidence 3577899999999998665444432222222222 244667778888888877665555432 5666654
No 377
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=42.30 E-value=21 Score=26.54 Aligned_cols=36 Identities=14% Similarity=0.029 Sum_probs=30.0
Q ss_pred ccCcceEEEEc-CCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 100 KRRFGCLVVVS-DDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 100 ~r~v~clvLVS-DDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
..|...+||=. |-.++..+...|++.|+.+++|=|-
T Consensus 45 ~~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DA 81 (123)
T 1rzw_A 45 DEGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDA 81 (123)
T ss_dssp GGCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCT
T ss_pred HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 46888998855 5588999999999999999888664
No 378
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=42.27 E-value=1.2e+02 Score=23.82 Aligned_cols=60 Identities=12% Similarity=0.207 Sum_probs=44.9
Q ss_pred cHHHHHhhceEEEEec------CCCccHHHHHHHHHHHHhhccCcceEEEEcCC-----------------cchHHHHHH
Q 045172 65 FADELKRAWFWVRMVL------VKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD-----------------SDFVEVFQE 121 (157)
Q Consensus 65 la~eLrRAGv~V~~V~------dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD-----------------sDF~~~lr~ 121 (157)
|...|+.+||-|..++ .-|... +.+ ..+|+|||.-.. .+..+.|+.
T Consensus 45 l~~aL~~~~~~v~~~~~~~~~~~fp~~~---------~~L--~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 113 (256)
T 2gk3_A 45 LLECLRKGGVDIDYMPAHTVQIAFPESI---------DEL--NRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKE 113 (256)
T ss_dssp HHHHHHHTTCEEEEECHHHHHHCCCCSH---------HHH--HTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHH
T ss_pred HHHHHHhcCceEEEEecccchhhCCcCh---------hHH--hcCCEEEEeCCchhhcccccccccccccChHHHHHHHH
Confidence 6778999999999985 444431 233 368999987432 455689999
Q ss_pred HHHcCCeEEEEcCC
Q 045172 122 ATLRWLKMVVVGDM 135 (157)
Q Consensus 122 Arer~l~tVVVGd~ 135 (157)
..+.|-..++||..
T Consensus 114 ~V~~GGgll~igG~ 127 (256)
T 2gk3_A 114 YVKNGGGLLMIGGY 127 (256)
T ss_dssp HHHTTCEEEEECST
T ss_pred HHHhCCEEEEECCh
Confidence 99999999999986
No 379
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=42.21 E-value=1.1e+02 Score=23.04 Aligned_cols=67 Identities=12% Similarity=0.093 Sum_probs=40.6
Q ss_pred HHHHHhhceE-EEEecCCCccHHHHHHHHHHHHhhccCcceEEEE---------cCC--------cchHHHHHHHHHcCC
Q 045172 66 ADELKRAWFW-VRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVV---------SDD--------SDFVEVFQEATLRWL 127 (157)
Q Consensus 66 a~eLrRAGv~-V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLV---------SDD--------sDF~~~lr~Arer~l 127 (157)
...++++||. |......|....-.-...+.+.+...|+.+.++. |.| ..+...++.|.+-|.
T Consensus 23 l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~ 102 (290)
T 2qul_A 23 AKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLGA 102 (290)
T ss_dssp HHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3456677874 4443444432111234455566667788776643 123 347788999999999
Q ss_pred eEEEE
Q 045172 128 KMVVV 132 (157)
Q Consensus 128 ~tVVV 132 (157)
++|++
T Consensus 103 ~~v~~ 107 (290)
T 2qul_A 103 PVFAG 107 (290)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 99986
No 380
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=42.20 E-value=73 Score=25.26 Aligned_cols=51 Identities=18% Similarity=0.140 Sum_probs=42.5
Q ss_pred cHHHHHHHHHHHHhhccCcceEEEEcCCcc----hHHHHHHHHHcCCeEEEEcCC
Q 045172 85 DADVLLRNYMVAMVDKRRFGCLVVVSDDSD----FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 85 AAD~AL~~~~~~~~~~r~v~clvLVSDDsD----F~~~lr~Arer~l~tVVVGd~ 135 (157)
..|+...+.+...+...|++|=+=|++-+. ..++++.|.++|++.+++|-+
T Consensus 17 ~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG 71 (174)
T 3lp6_A 17 DSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAG 71 (174)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEecC
Confidence 678999999999999999999888877655 556667778899998888766
No 381
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=41.97 E-value=50 Score=24.91 Aligned_cols=69 Identities=4% Similarity=-0.115 Sum_probs=43.0
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|+.+|.+|-+.|..|-.+...+..........+.+ ..+..+.++..|=+|...+-+.+.+- .+..+|-
T Consensus 34 iG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~ 107 (267)
T 3gdg_A 34 MGIEAARGCAEMGAAVAITYASRAQGAEENVKELEK---TYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIA 107 (267)
T ss_dssp HHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHH---HHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEE
T ss_pred hHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHH---hcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 346678899999999988765555332233333332 23567777777877777665554442 5666654
No 382
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=41.93 E-value=76 Score=24.70 Aligned_cols=39 Identities=10% Similarity=-0.215 Sum_probs=25.5
Q ss_pred HHHHHHhhccCcceEEEEcC-CcchHHHHHHHHHcCCeEEEEc
Q 045172 92 NYMVAMVDKRRFGCLVVVSD-DSDFVEVFQEATLRWLKMVVVG 133 (157)
Q Consensus 92 ~~~~~~~~~r~v~clvLVSD-DsDF~~~lr~Arer~l~tVVVG 133 (157)
..+.+.+...+.|+++. | -..|. ....|+..|+.+|.+.
T Consensus 92 ~~l~~~l~~~~pD~Vi~--d~~~~~~-~~~aA~~~giP~v~~~ 131 (402)
T 3ia7_A 92 RAAEEALGDNPPDLVVY--DVFPFIA-GRLLAARWDRPAVRLT 131 (402)
T ss_dssp HHHHHHHTTCCCSEEEE--ESTTHHH-HHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhccCCCEEEE--CchHHHH-HHHHHHhhCCCEEEEe
Confidence 45556665667887653 4 33343 4556788999999886
No 383
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=41.85 E-value=40 Score=23.52 Aligned_cols=42 Identities=10% Similarity=0.071 Sum_probs=28.1
Q ss_pred HHHhhccCcceEE--EEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 95 VAMVDKRRFGCLV--VVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 95 ~~~~~~r~v~clv--LVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.+.+...|+++=+ .|...+--..+++.|++.+...||+|-..
T Consensus 84 ~~~~~~~g~~~~~~~~~~~g~~~~~I~~~a~~~~~DlIV~G~~g 127 (170)
T 2dum_A 84 AEEVKRAFRAKNVRTIIRFGIPWDEIVKVAEEENVSLIILPSRG 127 (170)
T ss_dssp HHHHHHHTTCSEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCC
T ss_pred HHHHHHcCCceeeeeEEecCChHHHHHHHHHHcCCCEEEECCCC
Confidence 3333345665433 33334456789999999999999999773
No 384
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=41.74 E-value=18 Score=27.39 Aligned_cols=19 Identities=16% Similarity=-0.111 Sum_probs=16.0
Q ss_pred HHHHHhhceEEEEecCCCc
Q 045172 66 ADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpq 84 (157)
-.+|++.|+.+-.++.+|.
T Consensus 97 l~~L~~~G~~l~ivTn~~~ 115 (211)
T 2b82_A 97 IDMHVRRGDAIFFVTGRSP 115 (211)
T ss_dssp HHHHHHHTCEEEEEECSCC
T ss_pred HHHHHHCCCEEEEEcCCcH
Confidence 3578999999999988876
No 385
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=41.72 E-value=83 Score=22.35 Aligned_cols=62 Identities=16% Similarity=0.068 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC--chHHHh-hhhccc-chhhh
Q 045172 88 VLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS--DGALKR-IANAFF-SWSDL 153 (157)
Q Consensus 88 ~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~--~~~L~r-~AD~~f-sW~ev 153 (157)
-.....+.+.+ ....+-.+.|.|.. .+ +..|+..|+++|.|+.+. ...+.. .||.-+ ++.|+
T Consensus 168 ~~~~~~~~~~l-g~~~~~~i~vGD~~--~D-i~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el 233 (247)
T 3dv9_A 168 PEPYLMALKKG-GFKPNEALVIENAP--LG-VQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDF 233 (247)
T ss_dssp SHHHHHHHHHH-TCCGGGEEEEECSH--HH-HHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHH
T ss_pred CHHHHHHHHHc-CCChhheEEEeCCH--HH-HHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHH
Confidence 34555666666 34445555666653 34 678999999999998762 233333 677655 55554
No 386
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=41.70 E-value=47 Score=26.33 Aligned_cols=51 Identities=18% Similarity=0.119 Sum_probs=38.9
Q ss_pred cHHHHHHHHHHHHhhccCcceEEEEcCCc-chHHH---HHHHHHcCCeEEEEcCC
Q 045172 85 DADVLLRNYMVAMVDKRRFGCLVVVSDDS-DFVEV---FQEATLRWLKMVVVGDM 135 (157)
Q Consensus 85 AAD~AL~~~~~~~~~~r~v~clvLVSDDs-DF~~~---lr~Arer~l~tVVVGd~ 135 (157)
..|+...+.+.+.+...|+++=+=|++=. -+..+ .+.|+++|.+.++.|-+
T Consensus 21 ~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG 75 (170)
T 1xmp_A 21 TSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAG 75 (170)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECC
Confidence 67999999999999999999988777653 33334 34445688998888766
No 387
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=41.64 E-value=30 Score=25.06 Aligned_cols=39 Identities=15% Similarity=0.096 Sum_probs=25.9
Q ss_pred HHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 94 MVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 94 ~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
+.++. ..|+..+++ +....-.++.+.|++.|++ +||+.+
T Consensus 87 ~~~~~-~~gi~~i~~-~~g~~~~~~~~~a~~~Gir--~vgpnc 125 (140)
T 1iuk_A 87 LPEVL-ALRPGLVWL-QSGIRHPEFEKALKEAGIP--VVADRC 125 (140)
T ss_dssp HHHHH-HHCCSCEEE-CTTCCCHHHHHHHHHTTCC--EEESCC
T ss_pred HHHHH-HcCCCEEEE-cCCcCHHHHHHHHHHcCCE--EEcCCc
Confidence 33444 577877654 4444457888889999887 567765
No 388
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=41.61 E-value=94 Score=24.36 Aligned_cols=58 Identities=9% Similarity=0.018 Sum_probs=44.1
Q ss_pred HHHHHHHhhccCcceEEEEcCCcc----hHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccch
Q 045172 91 RNYMVAMVDKRRFGCLVVVSDDSD----FVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFSW 150 (157)
Q Consensus 91 ~~~~~~~~~~r~v~clvLVSDDsD----F~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fsW 150 (157)
...+.+.+ ..|-+..+|+|-|+- +..+++.+++.|+.+.||-..| ....-.|-+.+||
T Consensus 67 ~~~i~~~~-~~g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiS-S~~aa~a~~G~pl 128 (253)
T 4e16_A 67 IDVMREGI-ENNKSVVRLQTGDFSIYGSIREQVEDLNKLNIDYDCTPGVS-SFLGAASSLGVEY 128 (253)
T ss_dssp HHHHHHHH-HTTCCEEEEESBCTTTTCCHHHHHHHHHHHTCCEEEECCCC-HHHHHHHHHTCCS
T ss_pred HHHHHHHH-HCCCcEEEEeCCCCccccCHHHHHHHHHHCCCCEEEECCHH-HHHHHHHHhCCCc
Confidence 44555556 478888999999965 4678888999999999887775 5566667778888
No 389
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=41.59 E-value=89 Score=23.32 Aligned_cols=20 Identities=5% Similarity=-0.115 Sum_probs=15.3
Q ss_pred cHHHHHhhce--EEEEecCCCc
Q 045172 65 FADELKRAWF--WVRMVLVKPQ 84 (157)
Q Consensus 65 la~eLrRAGv--~V~~V~dkpq 84 (157)
+-..|+..|+ .+-.++..+.
T Consensus 150 ~L~~L~~~g~~~~l~i~Tn~~~ 171 (282)
T 3nuq_A 150 MLLRLRQSGKIDKLWLFTNAYK 171 (282)
T ss_dssp HHHHHHHSSSCSEEEEECSSCH
T ss_pred HHHHHHhCCCCceEEEEECCCh
Confidence 4467788898 8888888775
No 390
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=41.43 E-value=97 Score=22.32 Aligned_cols=57 Identities=18% Similarity=0.179 Sum_probs=38.6
Q ss_pred HHHHHHHHHHH--hhccCcceEEEEc---CCcchHHHHHHHHHcCCeEEEEcCCCchHHHhhh
Q 045172 87 DVLLRNYMVAM--VDKRRFGCLVVVS---DDSDFVEVFQEATLRWLKMVVVGDMSDGALKRIA 144 (157)
Q Consensus 87 D~AL~~~~~~~--~~~r~v~clvLVS---DDsDF~~~lr~Arer~l~tVVVGd~~~~~L~r~A 144 (157)
..+|...+-++ .+ .|...++=+| ++.||..++...+++|+..|.|-..++..+...|
T Consensus 31 ~~~L~~ki~~aP~FF-~~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a 92 (120)
T 3ghf_A 31 RQALEDKIAQAPAFL-KHAPVVINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDASLKVEI 92 (120)
T ss_dssp HHHHHHHHHHSHHHH-TTCEEEEEEEECCSSCCHHHHHHHHHTTTCEEEEEESCCCHHHHHHH
T ss_pred HHHHHHHHHhChHhh-CCCcEEEEccccCChHHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHH
Confidence 34454444444 22 5667777555 4679999999999999999999876544344433
No 391
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=41.33 E-value=73 Score=23.46 Aligned_cols=67 Identities=16% Similarity=-0.001 Sum_probs=42.5
Q ss_pred cCCCcHHHHHhhceEEEEecCC-CccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVK-PQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dk-pqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..++.+|.+.|..|..+... |...+ .+...+. ..+..+.++..|=+|...+-+.+.+. ++..||-
T Consensus 19 iG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~ 91 (258)
T 3afn_B 19 IGLATARLFARAGAKVGLHGRKAPANID-ETIASMR----ADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLIN 91 (258)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCCTTHH-HHHHHHH----HTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCchhhHH-HHHHHHH----hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3467889999999999887665 44433 2333322 23556777778888877665554432 6776664
No 392
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=41.31 E-value=46 Score=23.21 Aligned_cols=17 Identities=6% Similarity=0.114 Sum_probs=12.3
Q ss_pred HHHHHhhceEEEEecCC
Q 045172 66 ADELKRAWFWVRMVLVK 82 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dk 82 (157)
-.+|+..|+.+-.++..
T Consensus 100 l~~l~~~g~~~~i~t~~ 116 (221)
T 2wf7_A 100 LKDLRSNKIKIALASAS 116 (221)
T ss_dssp HHHHHHTTCEEEECCCC
T ss_pred HHHHHHCCCeEEEEcCc
Confidence 34567778888888776
No 393
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=41.23 E-value=37 Score=28.26 Aligned_cols=45 Identities=16% Similarity=0.268 Sum_probs=32.3
Q ss_pred ccCcceEEEEcCCcchH---HHHHHHHHcCCeEEEEcCCCchHHHhhh
Q 045172 100 KRRFGCLVVVSDDSDFV---EVFQEATLRWLKMVVVGDMSDGALKRIA 144 (157)
Q Consensus 100 ~r~v~clvLVSDDsDF~---~~lr~Arer~l~tVVVGd~~~~~L~r~A 144 (157)
+.+...++++++|.-+. +++++.+++|.++++|++..+..+...+
T Consensus 278 ~~~~~vi~l~~~~~~~~~~~~~~~e~~~rg~~v~~i~~~~~~~~~~~~ 325 (375)
T 2zj3_A 278 DKLMPVIMIIMRDHTYAKCQNALQQVVARQGRPVVICDKEDTETIKNT 325 (375)
T ss_dssp STTSCEEEEECSSTTHHHHHHHHHHHHHTTCCCEEEEETTCHHHHHHC
T ss_pred CCCCeEEEEECCChhHHHHHHHHHHHHHcCCeEEEEECCCchhhhhcc
Confidence 45668899999998766 4566667799999999876334454444
No 394
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=41.19 E-value=65 Score=24.89 Aligned_cols=68 Identities=21% Similarity=0.030 Sum_probs=42.6
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|.+|-+.|..|-.+...+...-..+...+ ...+..+.++..|=+|...+-+.+.+- ++..+|-
T Consensus 40 IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~ 112 (269)
T 4dmm_A 40 IGRAIALELAAAGAKVAVNYASSAGAADEVVAAI----AAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVN 112 (269)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH----HHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH----HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3477889999999999776443332222233322 234667888888888877765555432 6666654
No 395
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1
Probab=41.10 E-value=90 Score=24.63 Aligned_cols=57 Identities=11% Similarity=0.005 Sum_probs=43.2
Q ss_pred HHHHHhhccCcceEEEEcCCcch----HHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccchhh
Q 045172 93 YMVAMVDKRRFGCLVVVSDDSDF----VEVFQEATLRWLKMVVVGDMSDGALKRIANAFFSWSD 152 (157)
Q Consensus 93 ~~~~~~~~r~v~clvLVSDDsDF----~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fsW~e 152 (157)
.+.+.+. +-++.+|+|-|+-| ..+++.+++.|..+.||-..| ....-.|-+.+||.+
T Consensus 80 ~i~~~a~--~~~Va~L~~GDP~iy~~~~~l~~~~~~~gi~vevIPGiS-s~~aa~a~~G~pl~~ 140 (268)
T 1vhv_A 80 RLIERAK--SKSVVLLVPGDPMVATTHSAIKLEAERKGVKTRIIHGAS-ISTAVCGLTGLHNYR 140 (268)
T ss_dssp HHHHHHT--TSEEEEEESBCTTSSSHHHHHHHHHHHTTCCEEEECCCC-HHHHHHHHHCCCGGG
T ss_pred HHHHHhC--CCCEEEEeCCCCcccCcHHHHHHHHHHCCCcEEEECCcc-HHHHHHHHcCCCccc
Confidence 4444442 34788888999887 677888899999999998875 555666888899976
No 396
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=40.72 E-value=7.5 Score=22.75 Aligned_cols=19 Identities=37% Similarity=0.683 Sum_probs=16.0
Q ss_pred CCchhHHHHHHHhhhhhhh
Q 045172 2 FYNNDKLVNHFRQIHEGEQ 20 (157)
Q Consensus 2 f~t~~~L~kHFkqlHerEr 20 (157)
|.+...|..|.+++|..|+
T Consensus 22 f~~~~~L~~H~~~~H~~~k 40 (54)
T 2eps_A 22 FSRPDHLNGHIKQVHTSER 40 (54)
T ss_dssp ESSHHHHHHHHHHTSCCCC
T ss_pred cCCHHHHHHHHHHhcCCCC
Confidence 7888999999988897653
No 397
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=40.71 E-value=51 Score=24.56 Aligned_cols=67 Identities=16% Similarity=0.122 Sum_probs=43.6
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|.+|-+.|..|-.+...+...+ .+.. .+...+..+.++..|=+|...+-+.+.+- .+..+|-
T Consensus 17 IG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 88 (247)
T 3lyl_A 17 IGFEVAHALASKGATVVGTATSQASAE-KFEN----SMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVN 88 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSHHHHH-HHHH----HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHH----HHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 457789999999999988765554332 2222 23345777888888888877765555442 4666654
No 398
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=40.65 E-value=20 Score=27.00 Aligned_cols=35 Identities=11% Similarity=0.082 Sum_probs=24.6
Q ss_pred HHHHHHHHHcCCe---EEEEcCC-CchHHHhhhhcccch
Q 045172 116 VEVFQEATLRWLK---MVVVGDM-SDGALKRIANAFFSW 150 (157)
Q Consensus 116 ~~~lr~Arer~l~---tVVVGd~-~~~~L~r~AD~~fsW 150 (157)
..+...+..-|+. +++|||+ +|-...+.|...+-|
T Consensus 200 ~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 238 (279)
T 4dw8_A 200 LSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM 238 (279)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred HHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc
Confidence 3444455556764 8999999 777778888876654
No 399
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=40.58 E-value=55 Score=21.53 Aligned_cols=63 Identities=5% Similarity=-0.027 Sum_probs=35.1
Q ss_pred CcHHHHHh-hceEEEEecCCCccHHHHHHHHHHHHhhc-cCcceEEEEcC---CcchHHHHHHHHH----cCCeEEEEcC
Q 045172 64 GFADELKR-AWFWVRMVLVKPQDADVLLRNYMVAMVDK-RRFGCLVVVSD---DSDFVEVFQEATL----RWLKMVVVGD 134 (157)
Q Consensus 64 gla~eLrR-AGv~V~~V~dkpqAAD~AL~~~~~~~~~~-r~v~clvLVSD---DsDF~~~lr~Are----r~l~tVVVGd 134 (157)
.|...|.. .|+.|.++++..+ +.+.+.. ...|.+++=.+ +.+-.++++..|+ .+...+++..
T Consensus 19 ~l~~~L~~~~~~~v~~~~~~~~---------a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~ 89 (140)
T 3lua_A 19 KTKIIFDNIGEYDFIEVENLKK---------FYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATK 89 (140)
T ss_dssp HHHHHHHHHCCCEEEEECSHHH---------HHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEES
T ss_pred HHHHHHHhccCccEEEECCHHH---------HHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeC
Confidence 45666777 7888887654322 3334434 45565555333 2234456666665 4566666666
Q ss_pred C
Q 045172 135 M 135 (157)
Q Consensus 135 ~ 135 (157)
.
T Consensus 90 ~ 90 (140)
T 3lua_A 90 S 90 (140)
T ss_dssp C
T ss_pred C
Confidence 5
No 400
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=40.47 E-value=31 Score=27.41 Aligned_cols=66 Identities=9% Similarity=0.032 Sum_probs=36.0
Q ss_pred cHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcc-----eEEEEcCCcch-HHHHHHHHHcCCe-EEEEcCC
Q 045172 65 FADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFG-----CLVVVSDDSDF-VEVFQEATLRWLK-MVVVGDM 135 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~-----clvLVSDDsDF-~~~lr~Arer~l~-tVVVGd~ 135 (157)
+-..|+..|+.+-.++.+|...=. .+...|...|++ .++ +|.+..+ ....+.+.+.+.. +++|||+
T Consensus 109 ~L~~L~~~Gi~i~iaTnr~~~~~~----~~~~~L~~~Gl~~v~~~~vi-~~~~~~~K~~~~~~~~~~~~~~~l~VGDs 181 (258)
T 2i33_A 109 FLKYTESKGVDIYYISNRKTNQLD----ATIKNLERVGAPQATKEHIL-LQDPKEKGKEKRRELVSQTHDIVLFFGDN 181 (258)
T ss_dssp HHHHHHHTTCEEEEEEEEEGGGHH----HHHHHHHHHTCSSCSTTTEE-EECTTCCSSHHHHHHHHHHEEEEEEEESS
T ss_pred HHHHHHHCCCEEEEEcCCchhHHH----HHHHHHHHcCCCcCCCceEE-ECCCCCCCcHHHHHHHHhCCCceEEeCCC
Confidence 456789999999999999853211 122222233444 333 4444222 2333334344443 5679998
No 401
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=40.44 E-value=81 Score=22.38 Aligned_cols=77 Identities=22% Similarity=0.250 Sum_probs=47.3
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEEcCCCc-
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR--WLKMVVVGDMSD- 137 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer--~l~tVVVGd~~~- 137 (157)
.+|...|...|+.|..+++.. .| .+.+.....|++++=-+ +.|=.++++..++. +...++++...+
T Consensus 18 ~~l~~~L~~~g~~v~~~~~~~----~a-----l~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~ 88 (208)
T 1yio_A 18 EGLRNLLRSAGFEVETFDCAS----TF-----LEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHGDI 88 (208)
T ss_dssp HHHHHHHHTTTCEEEEESSHH----HH-----HHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESCTTS
T ss_pred HHHHHHHHhCCceEEEcCCHH----HH-----HHhhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCCH
Confidence 456777888899888754422 22 33444455666655322 34556788888875 577888876522
Q ss_pred ----hHHHhhhhccc
Q 045172 138 ----GALKRIANAFF 148 (157)
Q Consensus 138 ----~~L~r~AD~~f 148 (157)
.++...||-++
T Consensus 89 ~~~~~a~~~Ga~~~l 103 (208)
T 1yio_A 89 PMTVRAMKAGAIEFL 103 (208)
T ss_dssp CCCHHHHHTTEEEEE
T ss_pred HHHHHHHHCCCcEEE
Confidence 45666666655
No 402
>3kg2_A Glutamate receptor 2; ION channel, membrane protein, cell membrane, glycoprotein, transport, membrane, postsynaptic cell membrane, editing; HET: ZK1 NAG BMA; 3.60A {Rattus norvegicus}
Probab=40.43 E-value=25 Score=31.03 Aligned_cols=66 Identities=6% Similarity=0.122 Sum_probs=43.4
Q ss_pred HHHHHhhceEEEEec---CCCc--cHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCe----EEEEcC
Q 045172 66 ADELKRAWFWVRMVL---VKPQ--DADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLK----MVVVGD 134 (157)
Q Consensus 66 a~eLrRAGv~V~~V~---dkpq--AAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~----tVVVGd 134 (157)
..++.+.|+-|-.+. ..|. ..| ....+..+. ..+.+.+++.+...+...+++.|++.|+. +.++++
T Consensus 141 ~~~~~~~g~~v~~~~~~~~~~~~~~~d--~~~~l~~i~-~~~~~vii~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~~ 215 (823)
T 3kg2_A 141 LDSAAEKKWQVTAINVGNINNDKKDET--YRSLFQDLE-LKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN 215 (823)
T ss_dssp HHHHHHTTCEEEEEECSSCCSSSTTTT--TTTHHHHTT-TTTCCEEEEECCHHHHHHHHHHHHHHTTTBTTCEEEECS
T ss_pred HHHhhccCCceEEEEeecCCCCccchh--HHHHHHHHH-hcCCeEEEEECCHHHHHHHHHHHHHcCcCCCCeEEEEec
Confidence 345677887776542 2221 233 223333333 57889999999999999999999999874 445555
No 403
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=40.36 E-value=77 Score=25.18 Aligned_cols=41 Identities=20% Similarity=0.118 Sum_probs=26.4
Q ss_pred HHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 92 NYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 92 ~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
..+.+.+...+.|+++ +|..-|+.. -.|+..|+.+|.+.-.
T Consensus 120 ~~l~~~l~~~~pDlVv--~d~~~~~~~-~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 120 DGTMALVDDYRPDLVV--YEQGATVGL-LAADRAGVPAVQRNQS 160 (398)
T ss_dssp HHHHHHHHHHCCSEEE--EETTCHHHH-HHHHHHTCCEEEECCT
T ss_pred HHHHHHHHHcCCCEEE--ECchhhHHH-HHHHHcCCCEEEEecc
Confidence 3455555455678664 565666544 4678899998887643
No 404
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=40.22 E-value=26 Score=27.26 Aligned_cols=71 Identities=11% Similarity=0.069 Sum_probs=46.1
Q ss_pred CCCcHHHHHhhceEEEEecCCCc-------cHHHHHHHHHHHHhhccCcceEEEEcCCc-----ch-----------HHH
Q 045172 62 GYGFADELKRAWFWVRMVLVKPQ-------DADVLLRNYMVAMVDKRRFGCLVVVSDDS-----DF-----------VEV 118 (157)
Q Consensus 62 gygla~eLrRAGv~V~~V~dkpq-------AAD~AL~~~~~~~~~~r~v~clvLVSDDs-----DF-----------~~~ 118 (157)
|.-|+.+|...|+.|..+...|. .+|+.=...+.+.+ .++|.++-...-. ++ ..+
T Consensus 32 G~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~l 109 (347)
T 4id9_A 32 GRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAI--MGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRL 109 (347)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHH--TTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHH--hCCCEEEECCcccCcchhhHHHHHHHHHHHHHHH
Confidence 46788899999999988755542 34544444455555 2899988654322 21 457
Q ss_pred HHHHHHcCCeEEE-EcC
Q 045172 119 FQEATLRWLKMVV-VGD 134 (157)
Q Consensus 119 lr~Arer~l~tVV-VGd 134 (157)
++.|++.|++.+| +|-
T Consensus 110 l~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 110 LDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHHHHHTTCSEEEEEEE
T ss_pred HHHHHHcCCCeEEEECC
Confidence 8889999995444 443
No 405
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=40.09 E-value=22 Score=27.00 Aligned_cols=72 Identities=14% Similarity=0.031 Sum_probs=44.8
Q ss_pred CCCcHHHHHhhceEEEEecCCCc--cHHHHHHHHHHHHhhccCcceEEEEcCCcc------------------hHHHHHH
Q 045172 62 GYGFADELKRAWFWVRMVLVKPQ--DADVLLRNYMVAMVDKRRFGCLVVVSDDSD------------------FVEVFQE 121 (157)
Q Consensus 62 gygla~eLrRAGv~V~~V~dkpq--AAD~AL~~~~~~~~~~r~v~clvLVSDDsD------------------F~~~lr~ 121 (157)
|.-|+.+|. .|+.|..+...|. ..|..=...+.+.+...++|.++-...... -..+++.
T Consensus 13 G~~l~~~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a 91 (299)
T 1n2s_A 13 GWELQRSLA-PVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKA 91 (299)
T ss_dssp HHHHHHHTT-TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHhh-cCCeEEEeccccccccccCCCHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHH
Confidence 455778888 7999988765542 233332333444443336888887654322 2467888
Q ss_pred HHHcCCeEEEEcC
Q 045172 122 ATLRWLKMVVVGD 134 (157)
Q Consensus 122 Arer~l~tVVVGd 134 (157)
|++.|.+.|.+|-
T Consensus 92 ~~~~~~~~v~~SS 104 (299)
T 1n2s_A 92 ANETGAWVVHYST 104 (299)
T ss_dssp HTTTTCEEEEEEE
T ss_pred HHHcCCcEEEEec
Confidence 8888888777764
No 406
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=40.05 E-value=23 Score=27.13 Aligned_cols=73 Identities=21% Similarity=0.072 Sum_probs=44.8
Q ss_pred cCCCcHHHHHhhc-eEEEEecCCCccH---------------HHHHHHHHHHHhhccCcceEEEEcCCcc----------
Q 045172 61 VGYGFADELKRAW-FWVRMVLVKPQDA---------------DVLLRNYMVAMVDKRRFGCLVVVSDDSD---------- 114 (157)
Q Consensus 61 vgygla~eLrRAG-v~V~~V~dkpqAA---------------D~AL~~~~~~~~~~r~v~clvLVSDDsD---------- 114 (157)
+|..++.+|.+.| +.|..+...|..+ |..=...+.+.+ .++|.++.++....
T Consensus 17 iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~--~~~d~vi~~a~~~~~~~~~~~~~~ 94 (299)
T 2wm3_A 17 QGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELAL--NGAYATFIVTNYWESCSQEQEVKQ 94 (299)
T ss_dssp HHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHH--TTCSEEEECCCHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHH--hcCCEEEEeCCCCccccchHHHHH
Confidence 3455777888888 8888775555432 111122333444 47899998764211
Q ss_pred hHHHHHHHHHcCCeEEEEcCC
Q 045172 115 FVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 115 F~~~lr~Arer~l~tVVVGd~ 135 (157)
-..+++.|++.|++.+|...+
T Consensus 95 ~~~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 95 GKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp HHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHcCCCEEEEEcC
Confidence 125678888899988887543
No 407
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=39.98 E-value=73 Score=23.75 Aligned_cols=67 Identities=15% Similarity=0.055 Sum_probs=41.5
Q ss_pred cCCCcHHHHHhhceEEEEecC-CCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLV-KPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~d-kpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..++.+|.+.|..|..+.. .+...+ .+...+ ...+..+.++..|-+|...+-+.+.+. ++..||-
T Consensus 19 iG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~l----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 91 (261)
T 1gee_A 19 LGKSMAIRFATEKAKVVVNYRSKEDEAN-SVLEEI----KKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMIN 91 (261)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHH----HHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCChHHHH-HHHHHH----HhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 457788999999999988755 333222 222222 234556777778888877665554432 6766664
No 408
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=39.95 E-value=28 Score=31.17 Aligned_cols=47 Identities=13% Similarity=0.256 Sum_probs=35.8
Q ss_pred CcceEEEEcCCc-----chHHHHHHHHHc--CCeEEEEcCCCchHHHhhhhcccc
Q 045172 102 RFGCLVVVSDDS-----DFVEVFQEATLR--WLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 102 ~v~clvLVSDDs-----DF~~~lr~Arer--~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
..+||+++..|. .+..-++.|+++ |.+.|||.-. .......||.|++
T Consensus 166 ~ad~il~~G~n~~~~~p~~~~~~~~a~~~~~g~klividP~-~t~ta~~Ad~~l~ 219 (723)
T 2nap_A 166 QATCFFIIGSNTSEAHPVLFRRIARRKQVEPGVKIIVADPR-RTNTSRIADMHVA 219 (723)
T ss_dssp TCSEEEEESCCHHHHSHHHHHHHHHHHHHCTTCEEEEECSB-CCGGGGGCSEEEC
T ss_pred HCCEEEEEcCChhHhCcHHHHHHHHHHhhCCCCEEEEEcCc-CCchhhhhCeeee
Confidence 568999998763 345567889998 9999999765 2356678998884
No 409
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=39.91 E-value=87 Score=23.03 Aligned_cols=67 Identities=12% Similarity=0.032 Sum_probs=39.9
Q ss_pred cCCCcHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH---c--CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL---R--WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are---r--~l~tVVV 132 (157)
+|..++.+|.+.|..|..+ ...|...+ .+...+ ...+..+.++..|=+|...+-+.+.+ . ++..||-
T Consensus 17 iG~~~a~~l~~~G~~V~~~~~r~~~~~~-~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~ 89 (247)
T 2hq1_A 17 LGKAIAWKLGNMGANIVLNGSPASTSLD-ATAEEF----KAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVN 89 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCSHHH-HHHHHH----HHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCcCHHHHH-HHHHHH----HhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3567889999999999887 33343332 222222 23455667777777776655444433 2 6666653
No 410
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=39.84 E-value=23 Score=28.63 Aligned_cols=78 Identities=15% Similarity=0.129 Sum_probs=43.4
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHH-----------HHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEE
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLL-----------RNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVV 131 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL-----------~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVV 131 (157)
..++.+|++.|+.|-.+...|..+-..+ ...+.+.+ .++|.++.-+++.. ..++..+.+.|+.
T Consensus 14 ~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~--~~~d~v~~~~e~~~-~~~~~~l~~~gi~--- 87 (380)
T 3ax6_A 14 KMMTLEAKKMGFYVIVLDPTPRSPAGQVADEQIVAGFFDSERIEDLV--KGSDVTTYDLEHID-VQTLKKLYNEGYK--- 87 (380)
T ss_dssp HHHHHHHHHTTCEEEEEESSTTCTTGGGSSEEEECCTTCHHHHHHHH--HTCSEEEESCSCSC-HHHHHHHHHTTCE---
T ss_pred HHHHHHHHHCCCEEEEEeCCCCCchhhhCceEEECCCCCHHHHHHHH--hcCCEEEecccCCC-HHHHHHHHHCCCe---
Confidence 4577889999998877754443210000 11222333 46777766565554 6666666667775
Q ss_pred EcCCCchHHHhhhhcc
Q 045172 132 VGDMSDGALKRIANAF 147 (157)
Q Consensus 132 VGd~~~~~L~r~AD~~ 147 (157)
+|.+ +.++...-|.+
T Consensus 88 ~~~~-~~~~~~~~dK~ 102 (380)
T 3ax6_A 88 IHPS-PYTLEIIQDKF 102 (380)
T ss_dssp ESSC-HHHHHHHHSHH
T ss_pred ECCC-HHHHHHhcCHH
Confidence 3533 45555544443
No 411
>4fc5_A TON_0340, putative uncharacterized protein; unknown function; 2.30A {Thermococcus onnurineus}
Probab=39.74 E-value=13 Score=31.10 Aligned_cols=71 Identities=10% Similarity=0.158 Sum_probs=43.4
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHh---hccCcceEEE-------------------EcCCcchHHHHHH
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMV---DKRRFGCLVV-------------------VSDDSDFVEVFQE 121 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~---~~r~v~clvL-------------------VSDDsDF~~~lr~ 121 (157)
-||..|..-|..|..|.|++-.. +++.-..... +..+.+.||= ++. ..|-.++..
T Consensus 68 ala~aL~~lG~~~~ivt~~~~~~--~~~~~~~~~~~~~~~~~~~~lIaIERpGra~dG~y~nmrG~dI~~-~~lD~lf~~ 144 (270)
T 4fc5_A 68 AIYRAVEMLGGKAEILTYSEVEK--ALEPFGVSLARTPEPEDYSLIISVETPGRAADGRYYSMSALEIKR-DPLDGIFLK 144 (270)
T ss_dssp HHHHHHHHTTCCEEEECCHHHHH--HHGGGCCCBCSSCCGGGCSEEEEESCBCCBTTSCCBCTTCCBCCS-CCSCHHHHH
T ss_pred HHHHHHHHcCCceEEEecHHHHH--HHHHhccccccCCCCCCCCEEEEEccCcCCCCCCcccCcCCcCCc-cchHHHHHH
Confidence 36788999999999998765421 2211000000 0111232222 132 457789999
Q ss_pred HHHcCCeEEEEcCC-Cc
Q 045172 122 ATLRWLKMVVVGDM-SD 137 (157)
Q Consensus 122 Arer~l~tVVVGd~-~~ 137 (157)
|++.|+.|+.|||+ +.
T Consensus 145 a~~~gi~tigIGDGGNE 161 (270)
T 4fc5_A 145 ARALGIPTIGVGDGGNE 161 (270)
T ss_dssp HHHHTCCEEEEESSSSB
T ss_pred HHhCCCCEEEEcCCchh
Confidence 99999999999999 54
No 412
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=39.72 E-value=21 Score=26.55 Aligned_cols=35 Identities=9% Similarity=0.052 Sum_probs=24.7
Q ss_pred HHHHHHHHHcCC---eEEEEcCC-CchHHHhhhhcccch
Q 045172 116 VEVFQEATLRWL---KMVVVGDM-SDGALKRIANAFFSW 150 (157)
Q Consensus 116 ~~~lr~Arer~l---~tVVVGd~-~~~~L~r~AD~~fsW 150 (157)
..+...+..-|+ .+++|||+ +|-...+.|...+-|
T Consensus 203 ~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam 241 (274)
T 3fzq_A 203 KAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM 241 (274)
T ss_dssp HHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe
Confidence 345555555666 48999999 777778888776655
No 413
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=39.66 E-value=67 Score=23.48 Aligned_cols=51 Identities=18% Similarity=0.188 Sum_probs=34.9
Q ss_pred HHHHHhhccCcceEEEEcCCcc---h-HHHHHHHHHcCCeEEEEcCCCchHHHhhhhc
Q 045172 93 YMVAMVDKRRFGCLVVVSDDSD---F-VEVFQEATLRWLKMVVVGDMSDGALKRIANA 146 (157)
Q Consensus 93 ~~~~~~~~r~v~clvLVSDDsD---F-~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~ 146 (157)
+....+ .+|--.||+++.|.| . ..+-.++.+.++..+.|++. ..|++++-.
T Consensus 31 ~v~Kai-~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk--~~LG~a~G~ 85 (126)
T 2xzm_U 31 EVLRTI-EAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKR--ASLGEYLGH 85 (126)
T ss_dssp HHHHHH-HHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCS--HHHHHHHTC
T ss_pred HHHHHH-HcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCH--HHHHHHHCC
Confidence 344455 456677777777764 2 45567788899999988865 577777653
No 414
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=39.55 E-value=96 Score=21.71 Aligned_cols=44 Identities=14% Similarity=0.086 Sum_probs=31.8
Q ss_pred HHHHHHhhccCcceE--EEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 92 NYMVAMVDKRRFGCL--VVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 92 ~~~~~~~~~r~v~cl--vLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
..+.+.+...|+++- +.+...+--..+++.|++.+...||+|-.
T Consensus 81 ~~~~~~~~~~g~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~ 126 (155)
T 3dlo_A 81 SWAVSIIRKEGAEGEEHLLVRGKEPPDDIVDFADEVDAIAIVIGIR 126 (155)
T ss_dssp HHHHHHHHHTTCCEEEEEEESSSCHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHcCCCEEEECCC
Confidence 344444545676543 44655566789999999999999999976
No 415
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=39.37 E-value=58 Score=25.93 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEE
Q 045172 87 DVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVV 132 (157)
Q Consensus 87 D~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVV 132 (157)
+.-++.|.++.+...+++-+++|+|+..+.+++ ...|++.+..
T Consensus 42 GkPmi~~~l~~l~~~~i~~IvV~t~~~~i~~~~---~~~g~~v~~~ 84 (264)
T 3k8d_A 42 GKPMIVHVLERARESGAERIIVATDHEDVARAV---EAAGGEVCMT 84 (264)
T ss_dssp TEEHHHHHHHHHHHTTCSEEEEEESCHHHHHHH---HHTTCEEEEC
T ss_pred CeEHHHHHHHHHHhCCCCEEEEECCHHHHHHHH---HHcCCEEEEe
Confidence 344788888888777899999999876555444 4568876554
No 416
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=39.33 E-value=75 Score=23.64 Aligned_cols=64 Identities=13% Similarity=0.130 Sum_probs=39.6
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH---c--CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL---R--WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are---r--~l~tVVV 132 (157)
+|..++.+|-+.|..|-.+...+...+... .. + +..+.++..|=+|...+-+.+.+ . ++..||-
T Consensus 24 iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~~----~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~ 92 (265)
T 2o23_A 24 LGLATAERLVGQGASAVLLDLPNSGGEAQA-KK----L---GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVN 92 (265)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTSSHHHHH-HH----H---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCcHhHHHHH-HH----h---CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 357788999999999988766655444322 21 1 34566666777776655444433 2 6766653
No 417
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=39.32 E-value=39 Score=25.17 Aligned_cols=72 Identities=13% Similarity=0.088 Sum_probs=45.2
Q ss_pred cCCCcHHHHHhhc-eEEEEecCCCcc-------------HHHHHHHHHHHHhhccCcceEEEEcCCcchH----HHHHHH
Q 045172 61 VGYGFADELKRAW-FWVRMVLVKPQD-------------ADVLLRNYMVAMVDKRRFGCLVVVSDDSDFV----EVFQEA 122 (157)
Q Consensus 61 vgygla~eLrRAG-v~V~~V~dkpqA-------------AD~AL~~~~~~~~~~r~v~clvLVSDDsDF~----~~lr~A 122 (157)
+|-.++.+|.+.| +.|..+...|.. +|+.=...+.+.+ .++|.||......++. .+++.+
T Consensus 35 iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~D~vv~~a~~~~~~~~~~~~~~~~ 112 (236)
T 3qvo_A 35 IARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAM--QGQDIVYANLTGEDLDIQANSVIAAM 112 (236)
T ss_dssp HHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHH--TTCSEEEEECCSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHh--cCCCEEEEcCCCCchhHHHHHHHHHH
Confidence 3466788888999 888877544431 2433334444555 3789888665555543 367778
Q ss_pred HHcCCeEEE-EcC
Q 045172 123 TLRWLKMVV-VGD 134 (157)
Q Consensus 123 rer~l~tVV-VGd 134 (157)
++.|++.+| |+-
T Consensus 113 ~~~~~~~iV~iSS 125 (236)
T 3qvo_A 113 KACDVKRLIFVLS 125 (236)
T ss_dssp HHTTCCEEEEECC
T ss_pred HHcCCCEEEEEec
Confidence 888886554 554
No 418
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=39.29 E-value=33 Score=27.59 Aligned_cols=44 Identities=20% Similarity=0.165 Sum_probs=33.2
Q ss_pred CcceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhccc
Q 045172 102 RFGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFF 148 (157)
Q Consensus 102 ~v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~f 148 (157)
.=|+++.+|-. .|-..+++.|+++|.+++.|-+.. .|.+. |+.+
T Consensus 79 ~~dlvI~iS~SG~T~e~~~a~~~ak~~g~~~iaIT~~~--~La~~-~~~l 125 (302)
T 1tzb_A 79 RDGLLIAVSYSGNTIETLYTVEYAKRRRIPAVAITTGG--RLAQM-GVPT 125 (302)
T ss_dssp SSSEEEEECSSSCCHHHHHHHHHHHHTTCCEEEEESST--TGGGS-SSCE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEECCCc--hHHHC-CeeE
Confidence 44667777753 456678889999999999999873 78887 7655
No 419
>3zxs_A Cryptochrome B, rscryb; lyase, cryPro, lumazine, iron-sulfur-cluster; HET: FAD DLZ; 2.70A {Rhodobacter sphaeroides}
Probab=39.28 E-value=93 Score=28.25 Aligned_cols=76 Identities=13% Similarity=0.080 Sum_probs=47.9
Q ss_pred cHHHHHhhceEEEEec-CCC-ccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC----Cch
Q 045172 65 FADELKRAWFWVRMVL-VKP-QDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM----SDG 138 (157)
Q Consensus 65 la~eLrRAGv~V~~V~-dkp-qAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~----~~~ 138 (157)
++.+|+..|..|..+. |.| ++.| +...+.+.+...+++.|+.. +++=-.+.+..++.|+...++.|. ++.
T Consensus 72 fa~~L~~~G~~v~y~~~~~~~~~g~--~~~~L~~l~~~~~~~~v~~~--~P~e~r~~~~l~~~gi~v~~~~~~~fL~~~~ 147 (522)
T 3zxs_A 72 FARRLQERGFRVAYSRLDDPDTGPS--IGAELLRRAAETGAREAVAT--RPGDWRLIEALEAMPLPVRFLPDDRFLCPAD 147 (522)
T ss_dssp HHHHHHHTTCCEEEECTTCTTCCSS--HHHHHHHHHHHHTCCCEEEE--CCSCHHHHHHHHHSSSCEEEECCCCSSSCHH
T ss_pred HHHHHHhCCCeEEEEeccCccccCC--HHHHHHHHHHHcCCCEEEEe--CcchHHHHHHHHHcCCcEEEeCCCCcccCHH
Confidence 6899999999999875 333 3322 22344445556788888877 333333444444559999999886 455
Q ss_pred HHHhhh
Q 045172 139 ALKRIA 144 (157)
Q Consensus 139 ~L~r~A 144 (157)
.+..++
T Consensus 148 e~~~~~ 153 (522)
T 3zxs_A 148 EFARWT 153 (522)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 665544
No 420
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=39.26 E-value=34 Score=25.80 Aligned_cols=70 Identities=11% Similarity=0.118 Sum_probs=43.2
Q ss_pred CCCcHHHHHhhceEEEEecCCCcc----------HHHHHHHHHHHHhhccCcceEEEEcC---Ccch-----------HH
Q 045172 62 GYGFADELKRAWFWVRMVLVKPQD----------ADVLLRNYMVAMVDKRRFGCLVVVSD---DSDF-----------VE 117 (157)
Q Consensus 62 gygla~eLrRAGv~V~~V~dkpqA----------AD~AL~~~~~~~~~~r~v~clvLVSD---DsDF-----------~~ 117 (157)
|..|+.+|.+.|..|..+...|.. .|+.=...+.+.+ .++|+||-... ..++ ..
T Consensus 15 G~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~ 92 (267)
T 3ay3_A 15 GSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLV--KDCDGIIHLGGVSVERPWNDILQANIIGAYN 92 (267)
T ss_dssp HHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHH--TTCSEEEECCSCCSCCCHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHH--cCCCEEEECCcCCCCCCHHHHHHHHHHHHHH
Confidence 455777888889888877544431 3443333444455 37898887532 3333 46
Q ss_pred HHHHHHHcCCeEEE-Ec
Q 045172 118 VFQEATLRWLKMVV-VG 133 (157)
Q Consensus 118 ~lr~Arer~l~tVV-VG 133 (157)
+++.+++.+++.+| ++
T Consensus 93 l~~a~~~~~~~~iv~~S 109 (267)
T 3ay3_A 93 LYEAARNLGKPRIVFAS 109 (267)
T ss_dssp HHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHhCCCEEEEeC
Confidence 77888888885544 44
No 421
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=39.25 E-value=83 Score=25.93 Aligned_cols=60 Identities=10% Similarity=0.083 Sum_probs=41.8
Q ss_pred HHhh-ceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCCc-------chHHHHHHHHHcCCe---EEEEcCC
Q 045172 69 LKRA-WFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDS-------DFVEVFQEATLRWLK---MVVVGDM 135 (157)
Q Consensus 69 LrRA-Gv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDs-------DF~~~lr~Arer~l~---tVVVGd~ 135 (157)
|+++ ||.|.-. ++-|. .++.+.+-..+.+.|+|-+--. .+..+++..+++|++ .|+||..
T Consensus 152 L~~~~G~eVi~LG~~vp~-------e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~ 223 (262)
T 1xrs_B 152 LERYEMIDAYNLGSQVAN-------EDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGP 223 (262)
T ss_dssp GGGCTTEEEEECCSSBCH-------HHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECT
T ss_pred HHhcCCcEEEECCCCCCH-------HHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 8999 9999654 55555 3444455467888888766333 366788999999874 5677776
No 422
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=39.21 E-value=84 Score=23.37 Aligned_cols=77 Identities=12% Similarity=0.008 Sum_probs=47.6
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEEcCCCc-
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR--WLKMVVVGDMSD- 137 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer--~l~tVVVGd~~~- 137 (157)
.+|...|...|+.|.++.+..+ | .+.+.....|.++|=-. +.|=.++++..|+. ....+++....+
T Consensus 37 ~~l~~~L~~~g~~v~~~~~~~~----a-----l~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~ 107 (250)
T 3r0j_A 37 ELLSVSLKFQGFEVYTATNGAQ----A-----LDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARDSL 107 (250)
T ss_dssp HHHHHHHHHTTCEEEEESSHHH----H-----HHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECSTTH
T ss_pred HHHHHHHHHCCCEEEEECCHHH----H-----HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCH
Confidence 4677888899999887655333 2 22333456776666432 34556788888885 467777776632
Q ss_pred ----hHHHhhhhccc
Q 045172 138 ----GALKRIANAFF 148 (157)
Q Consensus 138 ----~~L~r~AD~~f 148 (157)
.++...||-++
T Consensus 108 ~~~~~~~~~Ga~~yl 122 (250)
T 3r0j_A 108 QDKIAGLTLGGDDYV 122 (250)
T ss_dssp HHHHHHHTSTTCEEE
T ss_pred HHHHHHHHcCCcEEE
Confidence 34455566554
No 423
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=39.20 E-value=1.3e+02 Score=23.01 Aligned_cols=20 Identities=10% Similarity=-0.075 Sum_probs=15.4
Q ss_pred cHHHHHhhceEEEEecCCCc
Q 045172 65 FADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpq 84 (157)
+-.+|+.+|+.+-.++.+|.
T Consensus 138 ~L~~L~~~g~~~~i~Tn~~~ 157 (261)
T 1yns_A 138 AVRKWREAGMKVYIYSSGSV 157 (261)
T ss_dssp HHHHHHHTTCEEEEECSSCH
T ss_pred HHHHHHhCCCeEEEEeCCCH
Confidence 44567788998888888876
No 424
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=39.08 E-value=63 Score=24.67 Aligned_cols=68 Identities=13% Similarity=0.007 Sum_probs=42.5
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|.+|-+.|..|-.+...+...-..+.. .+...+..+.++..|=+|...+-+.+.+- .+..+|-
T Consensus 37 IG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~ 109 (269)
T 3gk3_A 37 LGAAISRRLHDAGMAVAVSHSERNDHVSTWLM----HERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLIN 109 (269)
T ss_dssp HHHHHHHHHHTTTCEEEEEECSCHHHHHHHHH----HHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCchHHHHHHHH----HHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35778999999999998875333322222222 22245667778888888877765555442 6776664
No 425
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=39.07 E-value=82 Score=20.76 Aligned_cols=77 Identities=12% Similarity=0.100 Sum_probs=44.7
Q ss_pred CCcHHHHHhhceE--EEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHH----cCCeEEEEcC
Q 045172 63 YGFADELKRAWFW--VRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATL----RWLKMVVVGD 134 (157)
Q Consensus 63 ygla~eLrRAGv~--V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Are----r~l~tVVVGd 134 (157)
.+|...|.+.|+. |..+.+..+ +++.+.....|++++=.+ +.+=.++++..|+ .++..|++++
T Consensus 19 ~~l~~~L~~~~~~~~v~~~~~~~~---------a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~ 89 (144)
T 3kht_A 19 ALIRRVLDRKDIHCQLEFVDNGAK---------ALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTD 89 (144)
T ss_dssp HHHHHHHHHTTCCEEEEEESSHHH---------HHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEET
T ss_pred HHHHHHHHhcCCCeeEEEECCHHH---------HHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeC
Confidence 4567788888887 666554332 233344456676665333 2344567777776 4577888877
Q ss_pred CCc-----hHHHhhhhccc
Q 045172 135 MSD-----GALKRIANAFF 148 (157)
Q Consensus 135 ~~~-----~~L~r~AD~~f 148 (157)
..+ .++...||-++
T Consensus 90 ~~~~~~~~~~~~~ga~~~l 108 (144)
T 3kht_A 90 NVSDDRAKQCMAAGASSVV 108 (144)
T ss_dssp TCCHHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHcCCCEEE
Confidence 633 23344455554
No 426
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=38.90 E-value=77 Score=20.40 Aligned_cols=77 Identities=14% Similarity=0.120 Sum_probs=43.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHcC----CeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLRW----LKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer~----l~tVVVGd~~ 136 (157)
-.|...|.+.|+.|..+++..+| .+.+.....|.+++=.+ +.+-.++++..|+.. ...++++...
T Consensus 20 ~~l~~~L~~~g~~v~~~~~~~~a---------~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~~~ 90 (132)
T 3lte_A 20 AAIERVLKRDHWQVEIAHNGFDA---------GIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSGLD 90 (132)
T ss_dssp HHHHHHHHHTTCEEEEESSHHHH---------HHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECCSC
T ss_pred HHHHHHHHHCCcEEEEeCCHHHH---------HHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeCCC
Confidence 34677788899998876654332 22333456665555332 445567888888754 4455555543
Q ss_pred ch----HHHhhhhccc
Q 045172 137 DG----ALKRIANAFF 148 (157)
Q Consensus 137 ~~----~L~r~AD~~f 148 (157)
+. ++...||-++
T Consensus 91 ~~~~~~~~~~g~~~~l 106 (132)
T 3lte_A 91 KAKLQQAVTEGADDYL 106 (132)
T ss_dssp SHHHHHHHHHTCCEEE
T ss_pred hHHHHHHHHhChHHHh
Confidence 32 3344455444
No 427
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=38.90 E-value=21 Score=26.89 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=16.2
Q ss_pred chHHHHHHHHHcCCeEEEEcCC
Q 045172 114 DFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 114 DF~~~lr~Arer~l~tVVVGd~ 135 (157)
...++++.|.+.|++.++|-|-
T Consensus 19 ~~~e~v~~A~~~Gl~~iaiTDH 40 (245)
T 1m65_A 19 TLSDYIAQAKQKGIKLFAITDH 40 (245)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEE
T ss_pred cHHHHHHHHHHCCCCEEEECCC
Confidence 4667777777777777777775
No 428
>1h0h_A Formate dehydrogenase (large subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: b.52.2.2 c.81.1.1
Probab=38.83 E-value=34 Score=32.34 Aligned_cols=48 Identities=4% Similarity=0.009 Sum_probs=35.5
Q ss_pred cCcceEEEEcCCc-----chHHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccc
Q 045172 101 RRFGCLVVVSDDS-----DFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFFS 149 (157)
Q Consensus 101 r~v~clvLVSDDs-----DF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fs 149 (157)
...+||+++..|. .....+..|+++|.+.|||.=. .......||.|++
T Consensus 183 ~~ad~il~~G~N~~~~~p~~~~~~~~a~~~G~klivIDPr-~t~ta~~AD~~l~ 235 (977)
T 1h0h_A 183 KNSDVILMMGSNPAENHPISFKWVMRAKDKGATLIHVDPR-YTRTSTKCDLYAP 235 (977)
T ss_dssp GGCSEEEEESCCHHHHSTTHHHHHHHHHHTTCEEEEECSS-CCTTGGGCSEEEC
T ss_pred hhCCEEEEECCChHHhCcHHHHHHHHHHHCCCeEEEECCC-CCchhHHhCeeec
Confidence 3469999998763 3445577899999999999765 2345778998864
No 429
>1z2t_A Anchor peptide Ser65-Leu87 of ALMGS; lipid binding protein; NMR {Synthetic}
Probab=38.70 E-value=12 Score=21.36 Aligned_cols=21 Identities=43% Similarity=0.434 Sum_probs=18.1
Q ss_pred hhccchhhhhhhhhhhhhHHH
Q 045172 29 SARGKVRVLLVGNYSIKMEKN 49 (157)
Q Consensus 29 s~kG~rr~~~~~~~~~k~~kY 49 (157)
|+||=|-+.|+.+|.+|+.|.
T Consensus 1 slkgfrlvlfvkryvrkmrkl 21 (26)
T 1z2t_A 1 SLKGFRLVLFVKRYVRKMRKL 21 (26)
T ss_dssp CCCCTTHHHHHHHHTHHHHSC
T ss_pred CCccEEEeeeHHHHHHHHHhh
Confidence 678999999999999998763
No 430
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=38.64 E-value=23 Score=30.80 Aligned_cols=44 Identities=14% Similarity=-0.004 Sum_probs=33.9
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD 112 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD 112 (157)
+.+|.+||.+|+.|.+..... .+++++..+- ..|+.++++|.+|
T Consensus 378 ~~la~~LR~~Gi~ve~~~~~~-----slkkq~k~A~-k~ga~~vviiGe~ 421 (456)
T 3lc0_A 378 LAVLRRLRDAGRSADIILDKK-----KVVQAFNYAD-RVGAVRAVLVAPE 421 (456)
T ss_dssp HHHHHHHHHTTCCEEECCSCC-----CHHHHHHHHH-HTTEEEEEEECHH
T ss_pred HHHHHHHHHCCCeEEEecCCC-----CHHHHHHHHH-HcCCCEEEEECCc
Confidence 456899999999998864433 2677666554 8999999999875
No 431
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=38.61 E-value=39 Score=28.00 Aligned_cols=37 Identities=3% Similarity=0.004 Sum_probs=29.7
Q ss_pred ccCcceEEEEcCCc-chHHHHHHHHHcCCeEEEEcCCC
Q 045172 100 KRRFGCLVVVSDDS-DFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 100 ~r~v~clvLVSDDs-DF~~~lr~Arer~l~tVVVGd~~ 136 (157)
+.+...+++++++. .+..+++..+++|.++++|++..
T Consensus 255 d~~~pvi~~~~~~~~~~~~~~~~~~~~g~~v~~i~~~~ 292 (352)
T 3g68_A 255 NSDSTIFILDTGKEPRVTKMIDVLSGWTENVFAIGRDV 292 (352)
T ss_dssp CTTEEEEEEECSCCTTHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCceEEEEECCchHHHHHHHHHHHHcCCeEEEEecCC
Confidence 44557888888764 37889999999999999999863
No 432
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=38.59 E-value=62 Score=22.76 Aligned_cols=62 Identities=8% Similarity=-0.097 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC--CchHHHhhhhccc-chhhh
Q 045172 88 VLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM--SDGALKRIANAFF-SWSDL 153 (157)
Q Consensus 88 ~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~--~~~~L~r~AD~~f-sW~ev 153 (157)
-.....+.+.+ +...+-.+.|.|. . .=+..|+..|++++.|..+ ....+...||.-+ ++.|+
T Consensus 155 ~~~~~~~~~~~-~~~~~~~~~iGD~--~-~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 219 (230)
T 3um9_A 155 QKVYELAMDTL-HLGESEILFVSCN--S-WDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVL 219 (230)
T ss_dssp HHHHHHHHHHH-TCCGGGEEEEESC--H-HHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHH
T ss_pred hHHHHHHHHHh-CCCcccEEEEeCC--H-HHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHH
Confidence 56667777766 3444555666544 2 3467789999999998754 2234455666655 45554
No 433
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=38.54 E-value=94 Score=22.27 Aligned_cols=64 Identities=9% Similarity=0.002 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhhccC-cceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC--CchHH-Hhhhhccc-chhhh
Q 045172 86 ADVLLRNYMVAMVDKRR-FGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM--SDGAL-KRIANAFF-SWSDL 153 (157)
Q Consensus 86 AD~AL~~~~~~~~~~r~-v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~--~~~~L-~r~AD~~f-sW~ev 153 (157)
.+-.....+.+.+ ... .+-.+.|.|.. .=+..|+..|+++|.|..+ .+..+ ...||.-+ ++.|+
T Consensus 167 p~~~~~~~~~~~~-g~~~~~~~i~vGD~~---~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el 235 (240)
T 3sd7_A 167 NKNEVIQYVLDLC-NVKDKDKVIMVGDRK---YDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESI 235 (240)
T ss_dssp CHHHHHHHHHHHH-TCCCGGGEEEEESSH---HHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTH
T ss_pred CCHHHHHHHHHHc-CCCCCCcEEEECCCH---HHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHH
Confidence 3456667777766 444 55666777653 4457889999999999754 22344 45677655 55554
No 434
>3m84_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha-beta fold, csgid, ATP-binding, nucleotide-BIND purine biosynthesis; HET: MSE AMP TRS; 1.70A {Francisella tularensis subsp} PDB: 3qty_A*
Probab=38.49 E-value=1.1e+02 Score=25.50 Aligned_cols=73 Identities=15% Similarity=0.163 Sum_probs=46.1
Q ss_pred CCCcHHHHHh---hceEEEEecCC-CccHHHHHH--------HHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCC-e
Q 045172 62 GYGFADELKR---AWFWVRMVLVK-PQDADVLLR--------NYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWL-K 128 (157)
Q Consensus 62 gygla~eLrR---AGv~V~~V~dk-pqAAD~AL~--------~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l-~ 128 (157)
|+||+..|.+ .|+-+..=.++ |--...... ..|.... +.|. .+|++-+..+...+++.+++.|. .
T Consensus 257 ggGL~~~L~ei~~sgvg~~I~~~~iP~~~~~~~~~~~~~~~~~e~~~~~-~~g~-gll~~v~~~~~~~~~~~l~~~g~~~ 334 (350)
T 3m84_A 257 GGGFIENIPRVLPQGLGAQIDKDSFATPAIFKLMQRIGDISEFEMYRSF-NMGI-GMTIIASQDQFDKMQELAKKHTNTK 334 (350)
T ss_dssp TTHHHHHHHHHSCTTCEEEECGGGSCCCHHHHHHHHHHTCCHHHHHHHC-CTTE-EEEEEECGGGHHHHHHHHTTCTTSC
T ss_pred CccHHHHHHHHhhhCceEEEEcccCCCcHHHHHHHHhcCCCHHHHHHHH-hCCC-CEEEEECHHHHHHHHHHHHhcCCCC
Confidence 4999988877 46666553332 321111111 1222222 3443 48888888899999999999999 9
Q ss_pred EEEEcCCC
Q 045172 129 MVVVGDMS 136 (157)
Q Consensus 129 tVVVGd~~ 136 (157)
..+||..+
T Consensus 335 a~~IG~V~ 342 (350)
T 3m84_A 335 LYQIGKIT 342 (350)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 99999753
No 435
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=38.44 E-value=96 Score=21.40 Aligned_cols=19 Identities=16% Similarity=0.204 Sum_probs=13.1
Q ss_pred HHHHHhhceEEEEecCCCc
Q 045172 66 ADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpq 84 (157)
-..|+..|+.+-.++..+.
T Consensus 98 l~~l~~~g~~~~i~s~~~~ 116 (225)
T 3d6j_A 98 LTHLKKQGIRIGIISTKYR 116 (225)
T ss_dssp HHHHHHHTCEEEEECSSCH
T ss_pred HHHHHHCCCeEEEEECCCH
Confidence 3456777888777777654
No 436
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=38.41 E-value=67 Score=24.69 Aligned_cols=64 Identities=22% Similarity=0.093 Sum_probs=41.2
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|..|-+.|..|-.+...+...+.... .+ +..+..+..|=+|...+-+.+.+- ++..+|-
T Consensus 23 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~ 91 (271)
T 3tzq_B 23 IGLETSRVLARAGARVVLADLPETDLAGAAA-----SV---GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDN 91 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTSCHHHHHH-----HH---CTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----Hh---CCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3577899999999999887665554433222 11 556677777877776665555432 6666654
No 437
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=38.40 E-value=87 Score=22.57 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=47.1
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEEcCCCc-
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR--WLKMVVVGDMSD- 137 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer--~l~tVVVGd~~~- 137 (157)
.+|...|...|+.|.++++..+ |+ +.+.....|++++=-+ +.+=.++++..++. +...+++....+
T Consensus 21 ~~l~~~L~~~g~~v~~~~~~~~----a~-----~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~ 91 (233)
T 1ys7_A 21 ASLERGLRLSGFEVATAVDGAE----AL-----RSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSV 91 (233)
T ss_dssp HHHHHHHHHTTCEEEEESSHHH----HH-----HHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECCCTT
T ss_pred HHHHHHHHhCCCEEEEECCHHH----HH-----HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCH
Confidence 4577788889998887654333 22 2333456776665332 33556788888874 677888876522
Q ss_pred ----hHHHhhhhccc
Q 045172 138 ----GALKRIANAFF 148 (157)
Q Consensus 138 ----~~L~r~AD~~f 148 (157)
.++...||-++
T Consensus 92 ~~~~~~~~~ga~~~l 106 (233)
T 1ys7_A 92 DDRVAGLEAGADDYL 106 (233)
T ss_dssp TCCCTTTTTTCSEEE
T ss_pred HHHHHHHHcCCCEEE
Confidence 34555566555
No 438
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=38.39 E-value=77 Score=20.30 Aligned_cols=63 Identities=19% Similarity=0.159 Sum_probs=39.7
Q ss_pred CcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhcc-CcceEEEEcC--C-cchHHHHHHHHHc--CCeEEEEcCC
Q 045172 64 GFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKR-RFGCLVVVSD--D-SDFVEVFQEATLR--WLKMVVVGDM 135 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r-~v~clvLVSD--D-sDF~~~lr~Arer--~l~tVVVGd~ 135 (157)
.|...|...|+.|..+.+..+ +.+.+... ..|++++=.+ + .+-.++++..++. +...+++++.
T Consensus 20 ~l~~~L~~~g~~v~~~~~~~~---------a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 20 DFESTLTDAGFLVTAVSSGAK---------AIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp HHHHHHHHTTCEEEEESSHHH---------HHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESS
T ss_pred HHHHHHHHcCCEEEEECCHHH---------HHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 466778888998887554322 23334344 5776665432 2 4455778888874 5788888776
No 439
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=38.15 E-value=60 Score=24.27 Aligned_cols=68 Identities=18% Similarity=0.120 Sum_probs=44.6
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEEc
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVVG 133 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVVG 133 (157)
+|..+|.+|-+.|..|-.+...+...+. +...+ ...+..+.++..|=+|...+-+.+.+- ++..+|-.
T Consensus 21 iG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ 93 (253)
T 3qiv_A 21 IGQAYAEALAREGAAVVVADINAEAAEA-VAKQI----VADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNN 93 (253)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH----HHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHH----HhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4578899999999999887554443322 22222 234667788888888877766555542 67777653
No 440
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=37.99 E-value=97 Score=23.99 Aligned_cols=70 Identities=9% Similarity=-0.107 Sum_probs=40.2
Q ss_pred cHHHHHhhceEEE--EecCCCccHH--HHHHHHHHHHhhccCcceEEEE----------cCCcchHHHHHHHHHcCCeEE
Q 045172 65 FADELKRAWFWVR--MVLVKPQDAD--VLLRNYMVAMVDKRRFGCLVVV----------SDDSDFVEVFQEATLRWLKMV 130 (157)
Q Consensus 65 la~eLrRAGv~V~--~V~dkpqAAD--~AL~~~~~~~~~~r~v~clvLV----------SDDsDF~~~lr~Arer~l~tV 130 (157)
-+.+..++|+..- ++.++....+ ....+.+.+.....|+.+++.+ -+..+..++.+.|.+.|+..|
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i 183 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIV 183 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEE
Confidence 3456677887655 3334432111 1234445555545678888776 122334455578888888888
Q ss_pred EEcC
Q 045172 131 VVGD 134 (157)
Q Consensus 131 VVGd 134 (157)
.++.
T Consensus 184 ~~~~ 187 (273)
T 2qjg_A 184 KTSY 187 (273)
T ss_dssp EECC
T ss_pred EECC
Confidence 8874
No 441
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=37.96 E-value=74 Score=19.98 Aligned_cols=63 Identities=13% Similarity=0.064 Sum_probs=38.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC---CcchHHHHHHHHHc----CCeEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD---DSDFVEVFQEATLR----WLKMVVVGDM 135 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD---DsDF~~~lr~Arer----~l~tVVVGd~ 135 (157)
-.+...|.+.|+.|.++.+..+ | .+.+.....+++++=.+ +.+=.++++..++. +...+++ +.
T Consensus 19 ~~l~~~L~~~g~~v~~~~~~~~----a-----~~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~-~~ 88 (127)
T 2gkg_A 19 ATLRSALEGRGFTVDETTDGKG----S-----VEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII-GN 88 (127)
T ss_dssp HHHHHHHHHHTCEEEEECCHHH----H-----HHHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE-EC
T ss_pred HHHHHHHHhcCceEEEecCHHH----H-----HHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE-ec
Confidence 3467778888998876554322 2 22233345676665332 33455788888875 6778888 44
No 442
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=37.89 E-value=79 Score=24.31 Aligned_cols=67 Identities=15% Similarity=0.059 Sum_probs=40.6
Q ss_pred CCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHH---H--cCCeEEEE
Q 045172 62 GYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEAT---L--RWLKMVVV 132 (157)
Q Consensus 62 gygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Ar---e--r~l~tVVV 132 (157)
|..+|..|.+.|..|-.+...+......+... +...+.++.++..|=+|...+-+.+. + -++..+|-
T Consensus 42 G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~ 113 (283)
T 1g0o_A 42 GREMAMELGRRGCKVIVNYANSTESAEEVVAA----IKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCS 113 (283)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH----HHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 47788999999999988765554222222222 22346667777778777766554443 3 25665553
No 443
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=37.83 E-value=24 Score=26.34 Aligned_cols=73 Identities=18% Similarity=0.145 Sum_probs=48.1
Q ss_pred CcHHHHHhhceEEEEecCCCcc------------HHHHHHHHHHHHhhccCcceEEEEc--------CCcchHHHHHHHH
Q 045172 64 GFADELKRAWFWVRMVLVKPQD------------ADVLLRNYMVAMVDKRRFGCLVVVS--------DDSDFVEVFQEAT 123 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpqA------------AD~AL~~~~~~~~~~r~v~clvLVS--------DDsDF~~~lr~Ar 123 (157)
++.+.|++||+.|.+++..+.. +|..+. -++....|.|++.. ++.++.++++.+-
T Consensus 41 ~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~~v~~~~~l~-----~~~~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~ 115 (193)
T 1oi4_A 41 SPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSID-----EVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFV 115 (193)
T ss_dssp HHHHHHHHTTCEEEEEESSTTCEEECTTSSCEEECCEEGG-----GCCGGGCSEEEECCBTHHHHHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECCCCcceecCCCCeEEECCCChH-----HCCcccCCEEEECCCcCHHHhhhCHHHHHHHHHHH
Confidence 4567899999999999765431 221111 01113568888865 4667888899998
Q ss_pred HcCCeEEEEcCCCchHHHh
Q 045172 124 LRWLKMVVVGDMSDGALKR 142 (157)
Q Consensus 124 er~l~tVVVGd~~~~~L~r 142 (157)
++|-....|..+. ..|.+
T Consensus 116 ~~gk~i~aIC~G~-~lLa~ 133 (193)
T 1oi4_A 116 NSGKPVFAICHGP-QLLIS 133 (193)
T ss_dssp HTTCCEEEETTTH-HHHHH
T ss_pred HcCCEEEEECHHH-HHHHH
Confidence 9998888887762 34443
No 444
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=37.83 E-value=59 Score=26.62 Aligned_cols=51 Identities=12% Similarity=-0.024 Sum_probs=35.8
Q ss_pred CCccHHHHHHHHHHHHhh-------------------ccCcceEEEEcCCcchHH---HHHHHHHcCCeEEEEcCC
Q 045172 82 KPQDADVLLRNYMVAMVD-------------------KRRFGCLVVVSDDSDFVE---VFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 82 kpqAAD~AL~~~~~~~~~-------------------~r~v~clvLVSDDsDF~~---~lr~Arer~l~tVVVGd~ 135 (157)
-|-|-..||+ +.++.. +.+...++++++| .+.. ++++.+++|.++++|++.
T Consensus 224 ~~~A~e~aLK--l~E~s~i~a~~~~~~E~~HGp~~~v~~~~~vi~~~~~~-~~~~~~~~~~~~~~~g~~v~~i~~~ 296 (342)
T 1j5x_A 224 FGVSLESALK--CIEMSLTFSEAYSTLEYRHGPKALVKKGTLVFMQKVSG-MDEQEKRLRKELESLGATVLEVGEG 296 (342)
T ss_dssp HHHHHHHHHH--HHHHHCCEEEEECGGGGGTTGGGGCCTTEEEEEECCTT-CHHHHHHHHHHHHHTTCEEEEESTT
T ss_pred HHHHHHHHHH--HHHHhhhheeeccHHHhcCCchhhhCCCceEEEEECCc-hHHHHHHHHHHHHHcCCeEEEEecC
Confidence 3447788887 666653 2344677778877 5543 677778899999999875
No 445
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ...
Probab=37.81 E-value=1.3e+02 Score=23.42 Aligned_cols=49 Identities=10% Similarity=-0.120 Sum_probs=39.5
Q ss_pred CcceEEEEcCCcch----HHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccchhh
Q 045172 102 RFGCLVVVSDDSDF----VEVFQEATLRWLKMVVVGDMSDGALKRIANAFFSWSD 152 (157)
Q Consensus 102 ~v~clvLVSDDsDF----~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fsW~e 152 (157)
+-+..+|+|-|+-| ..+++.++++|..+.||-..| ....- |-+.+||.+
T Consensus 77 g~~V~~l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiS-s~~aa-a~~g~pl~~ 129 (265)
T 2z6r_A 77 ENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPS-IYSAV-GITGLHIYK 129 (265)
T ss_dssp TSCEEEEESBCTTSSSSTHHHHHHHHHTTCCEEEECCCC-HHHHG-GGGTCCGGG
T ss_pred CCcEEEEECCCCcCCCCHHHHHHHHHHCCCcEEEECChh-HHHHH-HHhCCCccC
Confidence 56788899999875 778899999999999998876 33344 888999975
No 446
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=37.76 E-value=70 Score=23.77 Aligned_cols=28 Identities=14% Similarity=0.354 Sum_probs=19.4
Q ss_pred ceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 104 GCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 104 ~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
+|++ | +||. .+ ++-|+..|++||.|+.+
T Consensus 168 e~l~-V-gDs~-~d-i~aA~~aG~~~I~V~~g 195 (243)
T 4g9b_A 168 ACIG-I-EDAQ-AG-IDAINASGMRSVGIGAG 195 (243)
T ss_dssp GEEE-E-ESSH-HH-HHHHHHHTCEEEEESTT
T ss_pred HEEE-E-cCCH-HH-HHHHHHcCCEEEEECCC
Confidence 4444 4 4553 44 57888899999999876
No 447
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A*
Probab=37.75 E-value=45 Score=27.77 Aligned_cols=74 Identities=14% Similarity=0.173 Sum_probs=45.2
Q ss_pred CcccCCCcH-----HHHHhhc--------eEEEEecCCCccHHHHHHHHHHHHhhcc--CcceEEEEcCCcchHHHHHHH
Q 045172 58 TPKVGYGFA-----DELKRAW--------FWVRMVLVKPQDADVLLRNYMVAMVDKR--RFGCLVVVSDDSDFVEVFQEA 122 (157)
Q Consensus 58 ~pkvgygla-----~eLrRAG--------v~V~~V~dkpqAAD~AL~~~~~~~~~~r--~v~clvLVSDDsDF~~~lr~A 122 (157)
+|.+|||+. ..|...| +.|-.++-.++.. .....+.+.|-.. |+.+.+-.++ ..+..-++.|
T Consensus 299 ~pavGf~igveRl~~~l~e~~~~~~~~~p~~v~i~~~~~~~~--~~a~~l~~~Lr~~~~Gi~v~~d~~~-~~~~~~~~~a 375 (423)
T 1htt_A 299 TPAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLVASGADTQ--SAAMALAERLRDELPGVKLMTNHGG-GNFKKQFARA 375 (423)
T ss_dssp CCEEEEEEEHHHHHHHHHHHSTTCCCCCSCSEEEEECSTTHH--HHHHHHHHHHHHHSTTCCEEECCSC-CCHHHHHHHH
T ss_pred CCeEEEEecHHHHHHHHHhcCcCCCCCCCCcEEEEEcCHHHH--HHHHHHHHHHHcCCCCcEEEEeCCC-CCHHHHHHHH
Confidence 788998854 3344433 3444444333322 2233444555455 8888765443 5799999999
Q ss_pred HHcCCeEEE-EcC
Q 045172 123 TLRWLKMVV-VGD 134 (157)
Q Consensus 123 rer~l~tVV-VGd 134 (157)
...|...+| ||+
T Consensus 376 ~~~g~p~~iiiG~ 388 (423)
T 1htt_A 376 DKWGARVAVVLGE 388 (423)
T ss_dssp HHHTCSEEEEECH
T ss_pred HHcCCCEEEEECc
Confidence 999997655 675
No 448
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=37.74 E-value=75 Score=23.95 Aligned_cols=65 Identities=15% Similarity=0.074 Sum_probs=39.7
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHH---Hc--CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEAT---LR--WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Ar---er--~l~tVVV 132 (157)
+|..++..|.+.|..|..+...+. ..+... +...+..+.++..|=+|...+-+.+. +. ++..+|-
T Consensus 16 iG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~----l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~ 85 (255)
T 2q2v_A 16 IGLGIAQVLARAGANIVLNGFGDP---APALAE----IARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVN 85 (255)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCC---HHHHHH----HHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCch---HHHHHH----HHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 356788999999999988755444 222222 22345667777777777665544443 32 6766664
No 449
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=37.71 E-value=1e+02 Score=24.35 Aligned_cols=40 Identities=5% Similarity=-0.009 Sum_probs=24.2
Q ss_pred HHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 93 YMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 93 ~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
.+...+...+.|+++ +|...|... -.|+..|+..|.+.-.
T Consensus 114 ~l~~~~~~~~pDlVv--~d~~~~~~~-~~a~~~giP~v~~~~~ 153 (398)
T 4fzr_A 114 EALALAERWKPDLVL--TETYSLTGP-LVAATLGIPWIEQSIR 153 (398)
T ss_dssp HHHHHHHHHCCSEEE--EETTCTHHH-HHHHHHTCCEEEECCS
T ss_pred HHHHHHHhCCCCEEE--ECccccHHH-HHHHhhCCCEEEeccC
Confidence 444555455678553 665556543 3567788888876643
No 450
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=37.66 E-value=65 Score=24.16 Aligned_cols=67 Identities=13% Similarity=0.025 Sum_probs=41.2
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH------cCCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL------RWLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are------r~l~tVVV 132 (157)
+|..++.+|.+.|..|..+...+...+. +... +...+..+.++..|-+|...+-+.+.+ .++..||-
T Consensus 26 iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~ 98 (266)
T 1xq1_A 26 IGHAIVEEFAGFGAVIHTCARNEYELNE-CLSK----WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILIN 98 (266)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHH----HHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHH----HHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 3477888999999999887655543322 2222 223455677777888887665554443 35665553
No 451
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=37.62 E-value=64 Score=26.09 Aligned_cols=59 Identities=12% Similarity=0.076 Sum_probs=45.2
Q ss_pred HHHHHHHHhhccCcceEEEEcCCcch----HHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccch
Q 045172 90 LRNYMVAMVDKRRFGCLVVVSDDSDF----VEVFQEATLRWLKMVVVGDMSDGALKRIANAFFSW 150 (157)
Q Consensus 90 L~~~~~~~~~~r~v~clvLVSDDsDF----~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fsW 150 (157)
....+.+.+ ..|-+..+|+|-|+-| ..+++.+++.|+.+.||-..| ....-.|-+.+||
T Consensus 91 i~~~l~~~~-~~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~vevIPGiS-S~~aa~a~~Gipl 153 (294)
T 2ybo_A 91 INELLVRLA-RQQRRVVRLKGGDPFIFGRGAEELERLLEAGVDCQVVPGVT-AASGCSTYAGIPL 153 (294)
T ss_dssp HHHHHHHHH-HTTCCEEEEEEBCTTSSSSHHHHHHHHHHTTCCEEEECCCC-HHHHHHHHTTCCS
T ss_pred HHHHHHHHH-HCCCeEEEEcCCCCCccCCHHHHHHHHHHCCCCEEEECCHH-HHHHHHHHcCCCc
Confidence 344555666 4678899999999865 568899999999999998775 4556677888888
No 452
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=37.58 E-value=25 Score=29.07 Aligned_cols=71 Identities=7% Similarity=0.003 Sum_probs=49.4
Q ss_pred CCcHHHHHhhceEEEEecCCCc---cHHHHHHHHHHHHhh-------------------ccCcceEEEEcCCcchH---H
Q 045172 63 YGFADELKRAWFWVRMVLVKPQ---DADVLLRNYMVAMVD-------------------KRRFGCLVVVSDDSDFV---E 117 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpq---AAD~AL~~~~~~~~~-------------------~r~v~clvLVSDDsDF~---~ 117 (157)
..+|.+++.+...+ .+-..|+ |-.-||| +.++.. +.+...++++++|..+. +
T Consensus 196 ~~~a~~~~~~~~~~-~lG~G~~~~~A~E~ALK--lkE~s~i~ae~~~~~E~~HGP~ali~~~~~vi~~~~~~~~~~~~~~ 272 (344)
T 3fj1_A 196 PEMRVAIGARPSLF-TLGRGTSLAVSNEAALK--FKETCQLHAESYSSAEVLHGPVSIVEEGFPVLGFAAGDAAEAPLAE 272 (344)
T ss_dssp HHHHHHHHHSCCEE-EEECGGGHHHHHHHHHH--HHHHHCCCEEEEETTTGGGSSSCHHHHTCCEEECCCSSTTHHHHHH
T ss_pred HHHHHHHhCCCcEE-EEECCCCHHHHHHHHHH--HHHHhccCceeecHHhhccchHhhhcCCceEEEEecCCchHHHHHH
Confidence 35667777766554 3455554 6677776 444443 34568888999998776 5
Q ss_pred HHHHHHHcCCeEEEEcCCC
Q 045172 118 VFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 118 ~lr~Arer~l~tVVVGd~~ 136 (157)
++++.+++|-++++|++..
T Consensus 273 ~~~e~~~~g~~v~~i~~~~ 291 (344)
T 3fj1_A 273 IADQIAAKGATVFATTGRV 291 (344)
T ss_dssp HHHHHHHTTCCEEESSTTC
T ss_pred HHHHHHHcCCeEEEEeCCC
Confidence 6778888999999999863
No 453
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=37.45 E-value=23 Score=29.66 Aligned_cols=36 Identities=14% Similarity=0.130 Sum_probs=32.7
Q ss_pred cCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 101 RRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 101 r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
...+++|..++-.|...+++.|++.++..+++|.++
T Consensus 53 g~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGs 88 (322)
T 3tx1_A 53 GAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGS 88 (322)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCT
T ss_pred ceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCcc
Confidence 345899999999999999999999999999999985
No 454
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=37.36 E-value=1.1e+02 Score=23.60 Aligned_cols=43 Identities=5% Similarity=0.010 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEE
Q 045172 87 DVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVV 132 (157)
Q Consensus 87 D~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVV 132 (157)
+.-|+.|.++.+...|++-+++|+++..+.+ .+...|++.+.+
T Consensus 26 GkPli~~~l~~l~~~~~~~ivVv~~~~~i~~---~~~~~g~~v~~~ 68 (252)
T 3oam_A 26 GKPMIQWVYEQAMQAGADRVIIATDDERVEQ---AVQAFGGVVCMT 68 (252)
T ss_dssp TEEHHHHHHHHHHHTTCSEEEEEESCHHHHH---HHHHTTCEEEEC
T ss_pred CEEHHHHHHHHHHhCCCCeEEEECCHHHHHH---HHHHcCCEEEEc
Confidence 4447888888887778988999987644433 344578876654
No 455
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=37.30 E-value=96 Score=23.50 Aligned_cols=71 Identities=18% Similarity=0.026 Sum_probs=43.3
Q ss_pred cCCCcHHHHHhhceEEEEecCCCc--------cHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CC
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQ--------DADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WL 127 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpq--------AAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l 127 (157)
+|..+|..|-+.|..|-.+...+. +....+.. ....+...+..+.++..|=+|...+-+.+.+. .+
T Consensus 22 IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 100 (287)
T 3pxx_A 22 QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEE-AGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKL 100 (287)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHH-HHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHH-HHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 457789999999999988743311 11122222 22222245778888888888887765554432 67
Q ss_pred eEEEE
Q 045172 128 KMVVV 132 (157)
Q Consensus 128 ~tVVV 132 (157)
..+|-
T Consensus 101 d~lv~ 105 (287)
T 3pxx_A 101 DVVVA 105 (287)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 66654
No 456
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=37.30 E-value=1.1e+02 Score=22.66 Aligned_cols=20 Identities=10% Similarity=-0.037 Sum_probs=11.2
Q ss_pred HHHHHHhhccCcceEEEEcC
Q 045172 92 NYMVAMVDKRRFGCLVVVSD 111 (157)
Q Consensus 92 ~~~~~~~~~r~v~clvLVSD 111 (157)
+++.+.+...|++.+++.+-
T Consensus 88 ~~~i~~a~~lG~~~v~~~~g 107 (272)
T 2q02_A 88 EGLLRDAQGVGARALVLCPL 107 (272)
T ss_dssp HHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHhCCCEEEEccC
Confidence 44445555666666666543
No 457
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=37.29 E-value=86 Score=23.89 Aligned_cols=34 Identities=6% Similarity=-0.196 Sum_probs=21.6
Q ss_pred HHHHHhhc-cCcceEEEEcCCcchHHHHHHHHHcCC
Q 045172 93 YMVAMVDK-RRFGCLVVVSDDSDFVEVFQEATLRWL 127 (157)
Q Consensus 93 ~~~~~~~~-r~v~clvLVSDDsDF~~~lr~Arer~l 127 (157)
.+.+++.. ..++.|+-. +|.--..+++.+++.|+
T Consensus 172 ~~~~~l~~~~~~~ai~~~-~d~~a~g~~~al~~~G~ 206 (313)
T 2h3h_A 172 LAEAALNAHPDLDAFFGV-YAYNGPAQALVVKNAGK 206 (313)
T ss_dssp HHHHHHHHCTTCCEEEEC-STTHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCcCceEEEEc-CCCccHHHHHHHHHcCC
Confidence 34445532 245666554 45566789999999885
No 458
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=37.26 E-value=55 Score=26.28 Aligned_cols=64 Identities=13% Similarity=-0.006 Sum_probs=36.5
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHH-----------HHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLL-----------RNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWL 127 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL-----------~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l 127 (157)
..++.++++.|+.|-.+...|.+....+ ...+.+.+...++|.++.-+++.. ..++..+.+.|+
T Consensus 24 ~~~~~a~~~~G~~v~~~~~~~~~~~~~~~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e~~~-~~~~~~l~~~gi 98 (391)
T 1kjq_A 24 KEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIA-TDMLIQLEEEGL 98 (391)
T ss_dssp HHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEECSSCSC-HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCEEEEEECCCCCchhhhccceEECCCCCHHHHHHHHHHcCCCEEEECCCcCC-HHHHHHHHhCCC
Confidence 3467889999999888866665321110 123333443446777766665443 344555555666
No 459
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=37.14 E-value=58 Score=21.44 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=43.7
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCC----cchHHHHHHHHHc--CCeEEEEcCCC
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD----SDFVEVFQEATLR--WLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD----sDF~~~lr~Arer--~l~tVVVGd~~ 136 (157)
-.|...|...|+.|.++.+..+ +.+.+....+|++++=.+- .+=.++++..|+. ++..+++....
T Consensus 20 ~~l~~~L~~~g~~v~~~~~~~~---------a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 90 (136)
T 3kto_A 20 AALSKLLSPLDVTIQCFASAES---------FMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSS 90 (136)
T ss_dssp HHHHHHHTTSSSEEEEESSHHH---------HTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred HHHHHHHHHCCcEEEEeCCHHH---------HHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCC
Confidence 3466777788888887654322 2334434556655553322 3345677777774 56777777763
Q ss_pred c-----hHHHhhhhccc
Q 045172 137 D-----GALKRIANAFF 148 (157)
Q Consensus 137 ~-----~~L~r~AD~~f 148 (157)
+ .++...||-++
T Consensus 91 ~~~~~~~~~~~ga~~~l 107 (136)
T 3kto_A 91 DIPTAVRAMRASAADFI 107 (136)
T ss_dssp CHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHcChHHhe
Confidence 3 23444455444
No 460
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=36.90 E-value=25 Score=26.79 Aligned_cols=46 Identities=7% Similarity=-0.036 Sum_probs=31.2
Q ss_pred cccCCCcHHHHHhhceEEE---EecCCCccHHHHHHHHHHHHhhccCcceEEE
Q 045172 59 PKVGYGFADELKRAWFWVR---MVLVKPQDADVLLRNYMVAMVDKRRFGCLVV 108 (157)
Q Consensus 59 pkvgygla~eLrRAGv~V~---~V~dkpqAAD~AL~~~~~~~~~~r~v~clvL 108 (157)
=..+|-|+..|+.+|+.|. +|+|.|+ ++.+.+.+.+...+.|.++.
T Consensus 39 Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~----~I~~al~~a~~~~~~DlVit 87 (178)
T 2pjk_A 39 DESGDIIKQLLIENGHKIIGYSLVPDDKI----KILKAFTDALSIDEVDVIIS 87 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSCHH----HHHHHHHHHHTCTTCCEEEE
T ss_pred ehHHHHHHHHHHHCCCEEEEEEEeCCCHH----HHHHHHHHHHhcCCCCEEEE
Confidence 3455889999999998765 5677775 45555566663225776665
No 461
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=36.84 E-value=67 Score=23.23 Aligned_cols=65 Identities=14% Similarity=-0.024 Sum_probs=36.8
Q ss_pred CCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC-chHHHhhhhccc-chhhh
Q 045172 81 VKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS-DGALKRIANAFF-SWSDL 153 (157)
Q Consensus 81 dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~-~~~L~r~AD~~f-sW~ev 153 (157)
.||. -.....+.+.+ ....+-++.|.|. ..+ +..|+..|+.+|.|..+. +... ..||.-+ ++.++
T Consensus 138 ~Kp~---~~~~~~~~~~~-~~~~~~~~~vGD~--~~D-i~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el 204 (222)
T 2nyv_A 138 KKPS---PTPVLKTLEIL-GEEPEKALIVGDT--DAD-IEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDL 204 (222)
T ss_dssp TCCT---THHHHHHHHHH-TCCGGGEEEEESS--HHH-HHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHH
T ss_pred CCCC---hHHHHHHHHHh-CCCchhEEEECCC--HHH-HHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHH
Confidence 4554 34445555555 3344555566655 444 567788999999998652 1111 4455544 45554
No 462
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=36.79 E-value=37 Score=28.64 Aligned_cols=49 Identities=14% Similarity=0.190 Sum_probs=28.7
Q ss_pred HHHHHhhccCcceEEEEcCCc---chHHH-HHHHHHcCCeEEEEcCCCchHHHhhh
Q 045172 93 YMVAMVDKRRFGCLVVVSDDS---DFVEV-FQEATLRWLKMVVVGDMSDGALKRIA 144 (157)
Q Consensus 93 ~~~~~~~~r~v~clvLVSDDs---DF~~~-lr~Arer~l~tVVVGd~~~~~L~r~A 144 (157)
+.+.++ ..|--.||+++.|. +.... -.++++.|+..+.||+. ..|++++
T Consensus 142 eV~KaI-ekgkAkLVIIA~DasP~ei~~~Lp~LC~~~~VPyi~v~sk--~eLG~A~ 194 (266)
T 2zkr_f 142 TVTTLV-ENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK--ARLGHLV 194 (266)
T ss_dssp HHHHHH-HTTCCSEEEEESCCSSSTTTTHHHHHHHHHTCCEEEESCH--HHHHHHH
T ss_pred HHHHHH-HhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCEEEECCH--HHHHHHh
Confidence 344555 46667777777776 33332 35666777777766554 3555544
No 463
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=36.78 E-value=62 Score=24.07 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=25.4
Q ss_pred HHHHHhhc-cCcceEEEEcCCcchHHHHHHHHHcCCe----EEEEcCC
Q 045172 93 YMVAMVDK-RRFGCLVVVSDDSDFVEVFQEATLRWLK----MVVVGDM 135 (157)
Q Consensus 93 ~~~~~~~~-r~v~clvLVSDDsDF~~~lr~Arer~l~----tVVVGd~ 135 (157)
.+.+++.. ..+++|+ .++|.--.++++.++++|++ .|.++|.
T Consensus 180 ~~~~~l~~~~~~~ai~-~~~d~~a~g~~~al~~~G~~~di~vvg~d~~ 226 (289)
T 3brs_A 180 GTVELLTKYPDISVMV-GLNQYSATGAARAIKDMSLEAKVKLVCIDSS 226 (289)
T ss_dssp HHHHHHHHCTTEEEEE-ESSHHHHHHHHHHHHHTTCTTTSEEEEEESC
T ss_pred HHHHHHHhCCCceEEE-ECCCcchHHHHHHHHhcCCCCCEEEEEECCC
Confidence 34445532 2355554 45555667789999999865 5555554
No 464
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=36.77 E-value=73 Score=22.66 Aligned_cols=66 Identities=8% Similarity=0.002 Sum_probs=38.7
Q ss_pred CCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC-C-chHHHhhhhccc-chhhh
Q 045172 81 VKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM-S-DGALKRIANAFF-SWSDL 153 (157)
Q Consensus 81 dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~-~-~~~L~r~AD~~f-sW~ev 153 (157)
.||. -....++.+.+ ....+-.+.|.|. . .+ +..|+..|+.++.|..+ + ...+...||.-+ ++.++
T Consensus 150 ~Kp~---~~~~~~~~~~~-~~~~~~~~~iGD~-~-~D-i~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 218 (232)
T 1zrn_A 150 YKPD---NRVYELAEQAL-GLDRSAILFVASN-A-WD-ATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 218 (232)
T ss_dssp CTTS---HHHHHHHHHHH-TSCGGGEEEEESC-H-HH-HHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred CCCC---HHHHHHHHHHc-CCCcccEEEEeCC-H-HH-HHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHH
Confidence 3555 45556666665 3344445556544 2 44 56889999999998654 1 123445566555 56655
No 465
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=36.71 E-value=77 Score=23.50 Aligned_cols=62 Identities=11% Similarity=0.042 Sum_probs=33.3
Q ss_pred CcHHHHHhhceEEEEe--cCCCccHHHHHHHHHHHHhhc-cCcceEEEEcCCcchHHHHHHHHHcCCe
Q 045172 64 GFADELKRAWFWVRMV--LVKPQDADVLLRNYMVAMVDK-RRFGCLVVVSDDSDFVEVFQEATLRWLK 128 (157)
Q Consensus 64 gla~eLrRAGv~V~~V--~dkpqAAD~AL~~~~~~~~~~-r~v~clvLVSDDsDF~~~lr~Arer~l~ 128 (157)
|+-..|+..|..+... ..... .+. -...+.+++.. ..++.|+ .++|.--.++++.+++.|++
T Consensus 137 gf~~~l~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~~~~~~ai~-~~~d~~a~g~~~al~~~g~~ 201 (280)
T 3gyb_A 137 SFEATMRAHGLEPLSNDYLGPAV-EHA-GYTETLALLKEHPEVTAIF-SSNDITAIGALGAARELGLR 201 (280)
T ss_dssp HHHHHHHHTTCCCEECCCCSCCC-HHH-HHHHHHHHHHHCTTCCEEE-ESSHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCcCCCcccccCCCC-HHH-HHHHHHHHHhCCCCCCEEE-ECChHHHHHHHHHHHHcCCC
Confidence 4445566666554421 11111 222 23344555532 2355554 55666677899999999986
No 466
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=36.69 E-value=70 Score=23.02 Aligned_cols=18 Identities=11% Similarity=0.135 Sum_probs=10.3
Q ss_pred HHHHHhhceEEEEecCCCc
Q 045172 66 ADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkpq 84 (157)
-.+|++. +.+-.++..+.
T Consensus 121 l~~l~~~-~~~~i~Sn~~~ 138 (229)
T 4dcc_A 121 LLKLREK-YVVYLLSNTND 138 (229)
T ss_dssp HHHHTTT-SEEEEEECCCH
T ss_pred HHHHHhc-CcEEEEECCCh
Confidence 3445555 66666666654
No 467
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=36.68 E-value=87 Score=23.85 Aligned_cols=71 Identities=18% Similarity=0.034 Sum_probs=42.2
Q ss_pred cCCCcHHHHHhhceEEEEecCCCc--------cHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH---c--CC
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQ--------DADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL---R--WL 127 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpq--------AAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are---r--~l 127 (157)
+|..+|..|-+.|..|-.+...++ .....+.. ..+.+...+..+.++..|=+|...+-+.+.+ . ++
T Consensus 25 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 103 (278)
T 3sx2_A 25 QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAA-TVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRL 103 (278)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHH-HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHH-HHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 357789999999999988743311 01112222 2222224466788888888887766555543 2 66
Q ss_pred eEEEE
Q 045172 128 KMVVV 132 (157)
Q Consensus 128 ~tVVV 132 (157)
..+|-
T Consensus 104 d~lv~ 108 (278)
T 3sx2_A 104 DIVVA 108 (278)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 66654
No 468
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=36.42 E-value=1.4e+02 Score=23.65 Aligned_cols=59 Identities=12% Similarity=0.076 Sum_probs=44.3
Q ss_pred HHHHHHHHhhccCcceEEEEcCCcch----HHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccch
Q 045172 90 LRNYMVAMVDKRRFGCLVVVSDDSDF----VEVFQEATLRWLKMVVVGDMSDGALKRIANAFFSW 150 (157)
Q Consensus 90 L~~~~~~~~~~r~v~clvLVSDDsDF----~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fsW 150 (157)
....+.+.+ ..|-+..+|+|-|+-| ..+++.+++.|+.+.||-..| ....-.|-+.+||
T Consensus 82 ~~~~i~~~~-~~g~~Vv~L~~GDP~i~g~~~~l~~~l~~~gi~veviPGiS-S~~aa~a~~G~pl 144 (285)
T 1cbf_A 82 MVGTMLDRM-REGKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVT-SVFAAAAAAEAEL 144 (285)
T ss_dssp HHHHHHHHH-TTTCCEEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCC-HHHHHHHHTTCCS
T ss_pred HHHHHHHHH-HCCCeEEEEeCCCccccccHHHHHHHHHHCCCcEEEECCch-HHHHHHHHcCCCc
Confidence 345556666 4678899999999754 678888999999999997775 4555567777887
No 469
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=36.38 E-value=1.3e+02 Score=22.31 Aligned_cols=33 Identities=24% Similarity=0.244 Sum_probs=20.8
Q ss_pred CCcchHHHHHHHHHcCCeEEEEcCCCchHHHhhhhccc
Q 045172 111 DDSDFVEVFQEATLRWLKMVVVGDMSDGALKRIANAFF 148 (157)
Q Consensus 111 DDsDF~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~f 148 (157)
+||. .+ +.-|+..|++||.|++.. .+. .||.-+
T Consensus 194 GDs~-~D-i~aA~~aG~~~i~v~~~~--~~~-~ad~vi 226 (250)
T 4gib_A 194 EDAS-AG-IDAINSANMFSVGVGNYE--NLK-KANLVV 226 (250)
T ss_dssp ESSH-HH-HHHHHHTTCEEEEESCTT--TTT-TSSEEE
T ss_pred CCCH-HH-HHHHHHcCCEEEEECChh--Hhc-cCCEEE
Confidence 3443 44 577888888888888752 232 466544
No 470
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=36.23 E-value=86 Score=20.17 Aligned_cols=77 Identities=5% Similarity=-0.054 Sum_probs=44.0
Q ss_pred CCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEEcCCCc-
Q 045172 63 YGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR--WLKMVVVGDMSD- 137 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer--~l~tVVVGd~~~- 137 (157)
-+|...|...|+.|..+++.. .+.+.+.....|.+++=.+ +.+=.++++..|+. ....+++++..+
T Consensus 21 ~~l~~~L~~~g~~v~~~~~~~---------~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~ 91 (130)
T 3eod_A 21 SLLDSWFSSLGATTVLAADGV---------DALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENM 91 (130)
T ss_dssp HHHHHHHHHTTCEEEEESCHH---------HHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCH
T ss_pred HHHHHHHHhCCceEEEeCCHH---------HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCH
Confidence 346677888999988754322 2333444556675555322 33445677777775 467788877633
Q ss_pred ----hHHHhhhhccc
Q 045172 138 ----GALKRIANAFF 148 (157)
Q Consensus 138 ----~~L~r~AD~~f 148 (157)
.++...||-++
T Consensus 92 ~~~~~~~~~g~~~~l 106 (130)
T 3eod_A 92 ADIAKALRLGVEDVL 106 (130)
T ss_dssp HHHHHHHHHCCSEEE
T ss_pred HHHHHHHHcCCCEEE
Confidence 23444455444
No 471
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isome; NP_344614.1, putative putative tagatose-6-phosphate ketose/A isomerase; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=36.21 E-value=38 Score=28.75 Aligned_cols=45 Identities=20% Similarity=0.110 Sum_probs=34.7
Q ss_pred CcceEEEEcCCc---chHHHHHHHHHc--CCeEEEEcCCCchHHHhhhhc
Q 045172 102 RFGCLVVVSDDS---DFVEVFQEATLR--WLKMVVVGDMSDGALKRIANA 146 (157)
Q Consensus 102 ~v~clvLVSDDs---DF~~~lr~Arer--~l~tVVVGd~~~~~L~r~AD~ 146 (157)
.=+++|.+|-.- |-...++.|+++ |.+|+.|-+..++.|.+.||.
T Consensus 109 ~~dl~i~iS~SG~T~e~~~al~~ak~~~~g~~~i~IT~~~~s~la~~ad~ 158 (389)
T 3i0z_A 109 VATVLVSFARSGNSPESLATVDLAKSLVDELYQVTITCAADGKLALQAHG 158 (389)
T ss_dssp SEEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHHHHTSSS
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHccc
Confidence 346666666543 555678899999 999999977666899999996
No 472
>1jdp_A NPR-C, atrial natriuretic peptide clearance receptor; hormone-receptor complex, natriuretic peptide receptor, ALLO activation, signaling protein; HET: NDG NAG; 2.00A {Homo sapiens} SCOP: c.93.1.1 PDB: 1jdn_A* 1yk0_A* 1yk1_A*
Probab=36.14 E-value=37 Score=27.51 Aligned_cols=58 Identities=7% Similarity=0.123 Sum_probs=38.4
Q ss_pred HHHHhhceEEEEecCCC-ccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCe
Q 045172 67 DELKRAWFWVRMVLVKP-QDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLK 128 (157)
Q Consensus 67 ~eLrRAGv~V~~V~dkp-qAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~ 128 (157)
.+|++.|+-|-.+.--| ...|. ..++.-+. .+.+.|++.++..+...+++.|++.|+.
T Consensus 179 ~~~~~~g~~v~~~~~~~~~~~d~---~~~l~~i~-~~~~vii~~~~~~~~~~~~~~~~~~gl~ 237 (441)
T 1jdp_A 179 EVFQEEGLHTSIYSFDETKDLDL---EDIVRNIQ-ASERVVIMCASSDTIRSIMLVAHRHGMT 237 (441)
T ss_dssp HHHHHHTCEEEEEEECTTSCCCH---HHHHHHHH-HHCSEEEEESCHHHHHHHHHHHHHTTCT
T ss_pred HHHHhcCcEEEEEEecCCcccCH---HHHHHHhh-cCCcEEEEecCHHHHHHHHHHHHHcCCC
Confidence 56777897765443222 23343 22233332 4778899988888999999999999875
No 473
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=36.10 E-value=43 Score=25.40 Aligned_cols=35 Identities=14% Similarity=0.051 Sum_probs=16.4
Q ss_pred HHHHhhccCcceEEEEcCC----cchHHHHHHHHHcCCe
Q 045172 94 MVAMVDKRRFGCLVVVSDD----SDFVEVFQEATLRWLK 128 (157)
Q Consensus 94 ~~~~~~~r~v~clvLVSDD----sDF~~~lr~Arer~l~ 128 (157)
+.+.+...|+.++++.+.+ ..|..+...|.+.|++
T Consensus 89 ~i~~A~~lGa~~v~~~~g~~~~~~~l~~l~~~a~~~Gv~ 127 (264)
T 1yx1_A 89 TLRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARHGLQ 127 (264)
T ss_dssp HHHHHHHTTCSEEEEEEECCCSSCCHHHHHHHHTTSSCE
T ss_pred HHHHHHHcCCCEEEEecCCCCcHHHHHHHHHHHHhcCCE
Confidence 3333334555555544322 1455555555555553
No 474
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=36.03 E-value=11 Score=28.94 Aligned_cols=30 Identities=7% Similarity=0.120 Sum_probs=17.7
Q ss_pred cCcceEEEEcCCcchHHHHHHHHHcCCeEE
Q 045172 101 RRFGCLVVVSDDSDFVEVFQEATLRWLKMV 130 (157)
Q Consensus 101 r~v~clvLVSDDsDF~~~lr~Arer~l~tV 130 (157)
.++|.+++.+.++.-.+++..+-+.|...|
T Consensus 49 ~~~DvVv~~~~~~~~~~~~~~~l~~G~~vv 78 (236)
T 2dc1_A 49 REMDVAVEAASQQAVKDYAEKILKAGIDLI 78 (236)
T ss_dssp SCCSEEEECSCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCCcEE
Confidence 456666666666666666666666665433
No 475
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=35.99 E-value=74 Score=24.71 Aligned_cols=67 Identities=13% Similarity=-0.007 Sum_probs=44.2
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLR-----WLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer-----~l~tVVV 132 (157)
+|..+|..|-+.|..|-.+...+...+. +...+ ...+..+..+..|=+|...+-+.+.+- ++..+|-
T Consensus 44 IG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~----~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvn 115 (276)
T 3r1i_A 44 IGKKVALAYAEAGAQVAVAARHSDALQV-VADEI----AGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVC 115 (276)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSGGGGHH-HHHHH----HHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHH----HhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3477899999999999888666655443 22222 234567777778888777665555432 6776664
No 476
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=35.90 E-value=39 Score=22.79 Aligned_cols=29 Identities=10% Similarity=0.224 Sum_probs=12.6
Q ss_pred EEEEcCCcchHHHHHHHHHcCCeEEEEcC
Q 045172 106 LVVVSDDSDFVEVFQEATLRWLKMVVVGD 134 (157)
Q Consensus 106 lvLVSDDsDF~~~lr~Arer~l~tVVVGd 134 (157)
+++|.||..+...++..-+.|..++.+.+
T Consensus 7 ILivdd~~~~~~~l~~~L~~~~~v~~~~~ 35 (151)
T 3kcn_A 7 ILLVDDDYSLLNTLKRNLSFDFEVTTCES 35 (151)
T ss_dssp EEEECSCHHHHHHHHHHHTTTSEEEEESS
T ss_pred EEEEeCCHHHHHHHHHHhccCceEEEeCC
Confidence 34444444444444444444444444433
No 477
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=35.88 E-value=29 Score=29.29 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=31.3
Q ss_pred cceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC
Q 045172 103 FGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS 136 (157)
Q Consensus 103 v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~ 136 (157)
.++++...+-.|...+++.|++.++..+++|.++
T Consensus 15 a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGS 48 (340)
T 1uxy_A 15 AQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGS 48 (340)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCT
T ss_pred ccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 4788899999999999999999999999999985
No 478
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=35.84 E-value=96 Score=23.30 Aligned_cols=79 Identities=11% Similarity=0.024 Sum_probs=48.1
Q ss_pred HHHHHhhceE-EEEecCC-CccHHHHHHHHHHHHhhccCcceEEEEc----CCcchHHHHHHHHHcCCeEEEEcCCCchH
Q 045172 66 ADELKRAWFW-VRMVLVK-PQDADVLLRNYMVAMVDKRRFGCLVVVS----DDSDFVEVFQEATLRWLKMVVVGDMSDGA 139 (157)
Q Consensus 66 a~eLrRAGv~-V~~V~dk-pqAAD~AL~~~~~~~~~~r~v~clvLVS----DDsDF~~~lr~Arer~l~tVVVGd~~~~~ 139 (157)
...++++||. |...... |...+..-...+.+.+...|+.+.++-+ +...|...++.|.+-|.++|++.-+ ...
T Consensus 36 l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~-~~~ 114 (257)
T 3lmz_A 36 LKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPN-YEL 114 (257)
T ss_dssp HHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEEC-GGG
T ss_pred HHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecCC-HHH
Confidence 4566778885 4443321 2222233345566666778887655432 2346889999999999999998533 344
Q ss_pred HHhhhh
Q 045172 140 LKRIAN 145 (157)
Q Consensus 140 L~r~AD 145 (157)
|.+.++
T Consensus 115 l~~l~~ 120 (257)
T 3lmz_A 115 LPYVDK 120 (257)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 479
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=35.74 E-value=95 Score=21.54 Aligned_cols=20 Identities=10% Similarity=0.164 Sum_probs=15.1
Q ss_pred CcHHHHHhhceEEEEecCCCc
Q 045172 64 GFADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq 84 (157)
.+-..|+..| .+-.++..|.
T Consensus 93 ~~l~~l~~~g-~~~i~s~~~~ 112 (200)
T 3cnh_A 93 ALARDLGQRY-RMYSLNNEGR 112 (200)
T ss_dssp HHHHHHTTTS-EEEEEECCCH
T ss_pred HHHHHHHHcC-CEEEEeCCcH
Confidence 3456678889 8888888876
No 480
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=35.71 E-value=1.1e+02 Score=21.16 Aligned_cols=12 Identities=17% Similarity=0.061 Sum_probs=6.5
Q ss_pred ceEEEEecCCCc
Q 045172 73 WFWVRMVLVKPQ 84 (157)
Q Consensus 73 Gv~V~~V~dkpq 84 (157)
||.|+.+-+.+.
T Consensus 53 GV~Vril~~~~~ 64 (155)
T 1byr_A 53 GVDVKIVIDERG 64 (155)
T ss_dssp TCEEEEEEESTT
T ss_pred CCEEEEEEeCcc
Confidence 666666644443
No 481
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=35.60 E-value=84 Score=23.91 Aligned_cols=66 Identities=14% Similarity=-0.031 Sum_probs=42.7
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH---c-CCeEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL---R-WLKMVV 131 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are---r-~l~tVV 131 (157)
+|..+|..|-+.|..|-.+...+...+.. ...+. ..+..+.++..|=+|...+-+.+.+ . ++..+|
T Consensus 19 IG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~----~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~lv 88 (252)
T 3h7a_A 19 IGAEIAKKFAAEGFTVFAGRRNGEKLAPL-VAEIE----AAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVTI 88 (252)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSGGGGHHH-HHHHH----HTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHH----hcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEEE
Confidence 35778899999999999886666544432 22222 3466788888887877766554443 3 455544
No 482
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=35.58 E-value=47 Score=23.03 Aligned_cols=37 Identities=8% Similarity=0.005 Sum_probs=28.9
Q ss_pred cCcceEEEEcCCcchHHH---HHHHHHcCCeEEEEcCCCc
Q 045172 101 RRFGCLVVVSDDSDFVEV---FQEATLRWLKMVVVGDMSD 137 (157)
Q Consensus 101 r~v~clvLVSDDsDF~~~---lr~Arer~l~tVVVGd~~~ 137 (157)
.+.+++++|-|-+++..+ +...++.+...++||+-.|
T Consensus 80 ~~~~~~i~v~D~~~~~~~~~~~~~~~~~~~p~ilv~nK~D 119 (165)
T 2wji_A 80 EKPDLVVNIVDATALERNLYLTLQLMEMGANLLLALNKMD 119 (165)
T ss_dssp HCCSEEEEEEETTCHHHHHHHHHHHHHTTCCEEEEEECHH
T ss_pred CCCCEEEEEecCCchhHhHHHHHHHHhcCCCEEEEEEchH
Confidence 478999999998887654 4456667999999998753
No 483
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=35.43 E-value=96 Score=21.47 Aligned_cols=41 Identities=15% Similarity=0.122 Sum_probs=27.1
Q ss_pred HHHHHHHhhccCcceEEEEcC--C----cchHHHHHHHHHcCCeEEEEc
Q 045172 91 RNYMVAMVDKRRFGCLVVVSD--D----SDFVEVFQEATLRWLKMVVVG 133 (157)
Q Consensus 91 ~~~~~~~~~~r~v~clvLVSD--D----sDF~~~lr~Arer~l~tVVVG 133 (157)
...+.+.+ ..|-+ +|++|| | +-+.++++.+++.|+.+.||-
T Consensus 69 ~~~i~~~~-~~G~~-V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~viP 115 (117)
T 3hh1_A 69 VRQVIELL-EEGSD-VALVTDAGTPAISDPGYTMASAAHAAGLPVVPVP 115 (117)
T ss_dssp HHHHHHHH-HTTCC-EEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHH-HCCCe-EEEEecCCcCeEeccHHHHHHHHHHCCCcEEEeC
Confidence 35566666 34555 445553 3 346788899999999888773
No 484
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=35.37 E-value=59 Score=26.29 Aligned_cols=65 Identities=8% Similarity=0.082 Sum_probs=36.7
Q ss_pred HHHhhceEEEEe-cCCCccH--------HHHHHHHHHHHhhccCcceEEEEcCC---cchHHHHHHHHHcCCeEEEEcCC
Q 045172 68 ELKRAWFWVRMV-LVKPQDA--------DVLLRNYMVAMVDKRRFGCLVVVSDD---SDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 68 eLrRAGv~V~~V-~dkpqAA--------D~AL~~~~~~~~~~r~v~clvLVSDD---sDF~~~lr~Arer~l~tVVVGd~ 135 (157)
-|++.|+.|.-+ ...|+.. +..+.+..- ...|++-.++-... ..+.++.+..++.|+..||+||.
T Consensus 23 ~l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A---~~LGIpl~~v~~~g~~~~e~e~l~~~l~~~~i~~vv~Gdi 99 (237)
T 3rjz_A 23 WAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQA---RALGIPLVKGFTQGEKEKEVEDLKRVLSGLKIQGIVAGAL 99 (237)
T ss_dssp HHHHTTCEEEEEEEEECC--------CCSSSHHHHHH---HHHTCCEEEEEC------CHHHHHHHHTTSCCSEEECC--
T ss_pred HHHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHH---HHcCCCEEEEECCCCchHHHHHHHHHHHhcCCcEEEECCc
Confidence 356778776543 2333322 222333333 34588877665543 25778888888889999999998
No 485
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=35.33 E-value=42 Score=22.07 Aligned_cols=65 Identities=17% Similarity=0.007 Sum_probs=39.4
Q ss_pred CCcHHHHHhhc-eEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEEcCCC
Q 045172 63 YGFADELKRAW-FWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD--DSDFVEVFQEATLR--WLKMVVVGDMS 136 (157)
Q Consensus 63 ygla~eLrRAG-v~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD--DsDF~~~lr~Arer--~l~tVVVGd~~ 136 (157)
..|...|...| +.|.++++..+|-+ .+.....|.+++=.+ +.+=.++++..|+. ....+++....
T Consensus 28 ~~l~~~L~~~g~~~v~~~~~~~~a~~---------~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 97 (135)
T 3snk_A 28 RDVATRLDALAIYDVRVSETDDFLKG---------PPADTRPGIVILDLGGGDLLGKPGIVEARALWATVPLIAVSDEL 97 (135)
T ss_dssp HHHHHHHHHTSSEEEEEECGGGGGGC---------CCTTCCCSEEEEEEETTGGGGSTTHHHHHGGGTTCCEEEEESCC
T ss_pred HHHHHHHhhcCCeEEEEeccHHHHHH---------HHhccCCCEEEEeCCCCCchHHHHHHHHHhhCCCCcEEEEeCCC
Confidence 34677788889 99988776555322 233455666665332 23334566666664 47777777663
No 486
>1tmo_A TMAO reductase, trimethylamine N-oxide reductase; oxidoreductase, oxotransferase, molybdoenzyme, MO-cofactor, molybdenum; HET: 2MD; 2.50A {Shewanella massilia} SCOP: b.52.2.2 c.81.1.1
Probab=35.30 E-value=41 Score=30.76 Aligned_cols=47 Identities=6% Similarity=0.004 Sum_probs=35.8
Q ss_pred CcceEEEEcCCcc-------------hHHHHHHHHH---cCC-eEEEEcCCCchHHHhhh-hcccc
Q 045172 102 RFGCLVVVSDDSD-------------FVEVFQEATL---RWL-KMVVVGDMSDGALKRIA-NAFFS 149 (157)
Q Consensus 102 ~v~clvLVSDDsD-------------F~~~lr~Are---r~l-~tVVVGd~~~~~L~r~A-D~~fs 149 (157)
..+||+++..|.- ....++.|++ +|. +.|||.=. .......| |.|++
T Consensus 210 ~ad~il~~G~Np~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~klivIDPr-~t~ta~~a~d~~l~ 274 (829)
T 1tmo_A 210 HSDTIVLWSNDPYKNLQVGWNAETHESFAYLAQLKEKVKQGKIRVISIDPV-VTKTQAYLGCEQLY 274 (829)
T ss_dssp HCSEEEEESCCHHHHTSCCSSBCCCTHHHHHHHHHHHHHHTSSEEEEECSS-CCHHHHHHTCEEEC
T ss_pred hCCEEEEECCChhhccccccccccchHHHHHHHHHHHhhCCCceEEEECCC-CCCcchhhcCEEec
Confidence 5799999988752 4456788898 999 99999655 34567778 98873
No 487
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=35.26 E-value=21 Score=30.05 Aligned_cols=44 Identities=14% Similarity=0.159 Sum_probs=33.0
Q ss_pred CCcHHHHHhhceEEEEec-CCCccHHHHHHHHHHHHhhccCcceEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMVL-VKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD 112 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V~-dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD 112 (157)
+.++.+|+.+|+.|.+.- ..+ .++++|..+= ..|+..+|+|.++
T Consensus 383 ~~l~~~Lr~~Gi~ve~~~~~~~-----~l~~q~k~A~-~~g~~~~viiG~~ 427 (464)
T 4g84_A 383 LKLVSELWDAGIKAELLYKKNP-----KLLNQLQYCE-EAGIPLVAIIGEQ 427 (464)
T ss_dssp HHHHHHHHHTTCCEECCSCSSC-----CHHHHHHHHH-HHTCCEEEECCHH
T ss_pred HHHHHHHHHCCCcEEEEeCCCC-----CHHHHHHHHH-HCCCCEEEEECch
Confidence 457899999999998753 333 3666766554 7899999999874
No 488
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=35.25 E-value=27 Score=30.34 Aligned_cols=44 Identities=14% Similarity=0.143 Sum_probs=33.7
Q ss_pred CCcHHHHHhhceEEEEe-cCCCccHHHHHHHHHHHHhhccCcceEEEEcCC
Q 045172 63 YGFADELKRAWFWVRMV-LVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDD 112 (157)
Q Consensus 63 ygla~eLrRAGv~V~~V-~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDD 112 (157)
+.++.+|+.+|+.|.+. ...| .++.+|..+= ..|+..+|+|-++
T Consensus 436 ~~l~~~Lr~~Gi~ve~~~~~~~-----~l~~q~k~A~-~~g~~~~viiG~~ 480 (517)
T 4g85_A 436 LKLVSELWDAGIKAELLYKKNP-----KLLNQLQYCE-EAGIPLVAIIGEQ 480 (517)
T ss_dssp HHHHHHHHHTTCCEEECSSSSC-----CHHHHHHHHH-HHCCCEEEEECHH
T ss_pred HHHHHHHHHCCCcEEEEeCCCC-----CHHHHHHHHH-HCCCCEEEEECCh
Confidence 45789999999999885 3333 3667766554 7899999999874
No 489
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=35.24 E-value=42 Score=23.31 Aligned_cols=45 Identities=13% Similarity=0.091 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 86 ADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 86 AD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
....-+..|++.+ ..+|.+++-.+..+|.+ .+++.+.+.+|+|+-
T Consensus 50 ~~~~eR~~~l~~~--~~~d~v~~~~~~~~~~~---~~~~~~~~~iv~G~D 94 (132)
T 2b7l_A 50 YDYEQRKMMLESI--RYVDLVIPEKGWGQKED---DVEKFDVDVFVMGHD 94 (132)
T ss_dssp SCHHHHHHHHHTB--TTCCEEEEECCGGGHHH---HHHHTTCCEEEECGG
T ss_pred CCHHHHHHHHHhc--CCCCEEEECCChHHHHH---HHHHcCCCEEEECCC
Confidence 3444555666533 23887765222335554 467788899999975
No 490
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=35.16 E-value=65 Score=23.79 Aligned_cols=68 Identities=15% Similarity=0.110 Sum_probs=46.3
Q ss_pred CcHHHHHhhceEEEEecCCCc-----------cHHHHHHHHHHHHhhccCcceEEEEcC---------CcchHHHHHHHH
Q 045172 64 GFADELKRAWFWVRMVLVKPQ-----------DADVLLRNYMVAMVDKRRFGCLVVVSD---------DSDFVEVFQEAT 123 (157)
Q Consensus 64 gla~eLrRAGv~V~~V~dkpq-----------AAD~AL~~~~~~~~~~r~v~clvLVSD---------DsDF~~~lr~Ar 123 (157)
++.+.|++||+.|.+++..+. .+|..+.. ..+....|.|++..- +.++.++++.+-
T Consensus 21 ~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~v~~d~~l~~----~~~~~~~D~livpGG~~~~~~l~~~~~~~~~l~~~~ 96 (197)
T 2rk3_A 21 IPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLED----AKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQE 96 (197)
T ss_dssp HHHHHHHHTTCEEEEEETTCSSCEECTTSCEECCSEEHHH----HHTTCCCSEEEECCCHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEEcCCCCccccCCCCEEeCCcCHHH----cCCccCCCEEEECCCchhHHHhhhCHHHHHHHHHHH
Confidence 456789999999999975432 23433321 102346788888753 455777888888
Q ss_pred HcCCeEEEEcCC
Q 045172 124 LRWLKMVVVGDM 135 (157)
Q Consensus 124 er~l~tVVVGd~ 135 (157)
++|-....|..+
T Consensus 97 ~~gk~i~aiC~G 108 (197)
T 2rk3_A 97 NRKGLIATICAG 108 (197)
T ss_dssp HTTCEEEEETTT
T ss_pred HcCCEEEEECHH
Confidence 888877777776
No 491
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=35.07 E-value=1.1e+02 Score=23.65 Aligned_cols=70 Identities=7% Similarity=-0.005 Sum_probs=43.1
Q ss_pred CCCcHHHHHhhceEEEEecCCCccH------------------------HHHHHHHHHHHhhccCcceEEEEcCCcch--
Q 045172 62 GYGFADELKRAWFWVRMVLVKPQDA------------------------DVLLRNYMVAMVDKRRFGCLVVVSDDSDF-- 115 (157)
Q Consensus 62 gygla~eLrRAGv~V~~V~dkpqAA------------------------D~AL~~~~~~~~~~r~v~clvLVSDDsDF-- 115 (157)
|.-|+.+|.+.|+.|..+...|... |..=...+.+.+ .++|+++-......+
T Consensus 38 G~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~Vih~A~~~~~~~ 115 (351)
T 3ruf_A 38 GSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM--KGVDHVLHQAALGSVPR 115 (351)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT--TTCSEEEECCCCCCHHH
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh--cCCCEEEECCccCCcch
Confidence 3568889999999998875544321 211122233444 388988877654321
Q ss_pred ----------------HHHHHHHHHcCCeEEE-Ec
Q 045172 116 ----------------VEVFQEATLRWLKMVV-VG 133 (157)
Q Consensus 116 ----------------~~~lr~Arer~l~tVV-VG 133 (157)
..+++.|++.+++.+| +|
T Consensus 116 ~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~S 150 (351)
T 3ruf_A 116 SIVDPITTNATNITGFLNILHAAKNAQVQSFTYAA 150 (351)
T ss_dssp HHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEE
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 2378889999985444 44
No 492
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=35.05 E-value=1.2e+02 Score=21.78 Aligned_cols=62 Identities=11% Similarity=0.007 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCCC-chHHHhhh-hccc-chhhh
Q 045172 88 VLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDMS-DGALKRIA-NAFF-SWSDL 153 (157)
Q Consensus 88 ~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~~-~~~L~r~A-D~~f-sW~ev 153 (157)
-.....+.+.+ ....+-.+.|.| + ..+ +..|+..|+.++.|..+. ...+...| |.-+ ++.|+
T Consensus 164 ~~~~~~~~~~~-~~~~~~~~~iGD-~-~~D-i~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el 228 (240)
T 2no4_A 164 PRIYQFACDRL-GVNPNEVCFVSS-N-AWD-LGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSEL 228 (240)
T ss_dssp HHHHHHHHHHH-TCCGGGEEEEES-C-HHH-HHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGH
T ss_pred HHHHHHHHHHc-CCCcccEEEEeC-C-HHH-HHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHH
Confidence 45556666665 333444555654 4 234 578899999999997652 22234445 6554 56655
No 493
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=35.04 E-value=70 Score=24.12 Aligned_cols=66 Identities=14% Similarity=0.046 Sum_probs=40.0
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHH---HHHc--CCeEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQE---ATLR--WLKMVV 131 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~---Arer--~l~tVV 131 (157)
+|..+|..|-+.|..|-.+...+...+.. ... +...+..+.++..|-+|...+-+. +.+. ++..+|
T Consensus 26 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~----l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv 96 (260)
T 2zat_A 26 IGLAIARRLAQDGAHVVVSSRKQENVDRT-VAT----LQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILV 96 (260)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH----HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHH----HHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 34778899999999998876655433322 222 223455666777777776655443 3332 566665
No 494
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=35.03 E-value=92 Score=20.16 Aligned_cols=66 Identities=14% Similarity=-0.048 Sum_probs=39.1
Q ss_pred CCcHHHHHhhceEEEE-ecCCCccHHHHHHHHHHHHhhccCcceEEEEcC---CcchHHHHHHHHH-cCCeEEEEcCCCc
Q 045172 63 YGFADELKRAWFWVRM-VLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSD---DSDFVEVFQEATL-RWLKMVVVGDMSD 137 (157)
Q Consensus 63 ygla~eLrRAGv~V~~-V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSD---DsDF~~~lr~Are-r~l~tVVVGd~~~ 137 (157)
-.|...|.+.|+.|.. +.+..+ |+ +.+.....|++++=.+ +.+-.++++..++ .+...|++++..+
T Consensus 23 ~~l~~~L~~~g~~v~~~~~~~~~----a~-----~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 23 ATLRIQLESLGYDVLGVFDNGEE----AV-----RCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp HHHHHHHHHHTCEEEEEESSHHH----HH-----HHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred HHHHHHHHHCCCeeEEEECCHHH----HH-----HHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 3566778888998874 443222 22 2233345676666432 3344567777766 4788888887643
No 495
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=35.01 E-value=1.4e+02 Score=22.17 Aligned_cols=42 Identities=14% Similarity=-0.059 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhhccCc-ceEEEEcCCcchHHHHHHHHHcCCeEEE
Q 045172 87 DVLLRNYMVAMVDKRRF-GCLVVVSDDSDFVEVFQEATLRWLKMVV 131 (157)
Q Consensus 87 D~AL~~~~~~~~~~r~v-~clvLVSDDsDF~~~lr~Arer~l~tVV 131 (157)
+..|..|.++.+...++ +-+++|+++. .+...+.+.|+..+.
T Consensus 26 g~pli~~~i~~~~~~~~~~~ivvv~~~~---~i~~~~~~~~~~~~~ 68 (245)
T 1h7e_A 26 GKPMIQHVYERALQVAGVAEVWVATDDP---RVEQAVQAFGGKAIM 68 (245)
T ss_dssp TEEHHHHHHHHHHTCTTCCEEEEEESCH---HHHHHHHHTTCEEEE
T ss_pred CchHHHHHHHHHHhCCCCCeEEEECCcH---HHHHHHHHcCCeEEe
Confidence 44578888888877775 8888888763 344444556776543
No 496
>3qi7_A Putative transcriptional regulator; periplasmic binding protein-like, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.86A {Clostridium difficile}
Probab=34.95 E-value=90 Score=27.04 Aligned_cols=63 Identities=11% Similarity=0.130 Sum_probs=50.2
Q ss_pred ceEEEE-ecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHHcCCeEEEEcCC
Q 045172 73 WFWVRM-VLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATLRWLKMVVVGDM 135 (157)
Q Consensus 73 Gv~V~~-V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Arer~l~tVVVGd~ 135 (157)
|+.|-. .||.-.+.-+.-++.+.+.++..+++.|+..+++..-...+++.+++.+-.|+|+..
T Consensus 57 G~I~~~~~pd~F~se~~ttI~~I~~~a~~~gyk~II~n~~~~~~~~~i~~lkekrvDgIIi~~~ 120 (371)
T 3qi7_A 57 QTIKHVVLPENFTSNIDSAINKIVKLADDKEVQAIVVSTDQAGLLPALQKVKEKRPEIITISAP 120 (371)
T ss_dssp EEEEEEECCTTGGGGHHHHHHHHHGGGGCTTEEEEEEECSSCCCHHHHHHHHHHCTTSEEEESS
T ss_pred eEEEEeccCCCchHHHHHHHHHHHHHhhcCCCeEEEEECCCcchHHHHHHHHhcCCCEEEEecc
Confidence 777766 566666555667899999999999999999988877788899999988887776544
No 497
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=34.95 E-value=54 Score=27.35 Aligned_cols=91 Identities=15% Similarity=0.102 Sum_probs=68.7
Q ss_pred HHHHHhhceEEEEecCCC-----ccHHHHHHHH---------------HHHHhhccCcceEEEEcCCc---------ch-
Q 045172 66 ADELKRAWFWVRMVLVKP-----QDADVLLRNY---------------MVAMVDKRRFGCLVVVSDDS---------DF- 115 (157)
Q Consensus 66 a~eLrRAGv~V~~V~dkp-----qAAD~AL~~~---------------~~~~~~~r~v~clvLVSDDs---------DF- 115 (157)
|..-..||-.--||--.| |..|+...+. |++....-.-+.+|||-|.. ||
T Consensus 31 A~~ae~aGAdgITvHlReDrRHI~d~Dv~~L~~~~~~~lNlE~a~t~emi~ia~~~kP~~vtLVPE~r~e~TTegGldv~ 110 (243)
T 1m5w_A 31 AFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVA 110 (243)
T ss_dssp HHHHHTTTCSEEEEECCTTCSSSCHHHHHHHHHHCSSEEEEEECSSHHHHHHHHHHCCSEEEECCCCSSCSSCCSCCCSG
T ss_pred HHHHHHcCCCEEEeCCCCCcccCCHHHHHHHHHhcCCCEEeccCCCHHHHHHHHHcCCCEEEECCCCCCCcCCCcchhHH
Confidence 344457777777774444 3777776654 55555456669999998843 34
Q ss_pred ------HHHHHHHHHcCCeEEEEcCCCchHHHhhhhcccchhhhhcC
Q 045172 116 ------VEVFQEATLRWLKMVVVGDMSDGALKRIANAFFSWSDLLMG 156 (157)
Q Consensus 116 ------~~~lr~Arer~l~tVVVGd~~~~~L~r~AD~~fsW~ev~~G 156 (157)
.+++...++.|.++-++=|..+..+.-.+.+.-+|-|+-+|
T Consensus 111 ~~~~~l~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~GA~~IELhTG 157 (243)
T 1m5w_A 111 GQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTG 157 (243)
T ss_dssp GGHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHTTCSEEEEECH
T ss_pred hhHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEEech
Confidence 78899999999999999999888899888888888888776
No 498
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=34.94 E-value=72 Score=23.68 Aligned_cols=67 Identities=15% Similarity=0.065 Sum_probs=41.1
Q ss_pred cCCCcHHHHHhhceEEEEecCCCccHHHHHHHHHHHHhhccCcceEEEEcCCcchHHHHHHHHH-----cCCeEEEE
Q 045172 61 VGYGFADELKRAWFWVRMVLVKPQDADVLLRNYMVAMVDKRRFGCLVVVSDDSDFVEVFQEATL-----RWLKMVVV 132 (157)
Q Consensus 61 vgygla~eLrRAGv~V~~V~dkpqAAD~AL~~~~~~~~~~r~v~clvLVSDDsDF~~~lr~Are-----r~l~tVVV 132 (157)
+|..++.+|-+.|..|..+...+...+ .+...+ ...+..+.++..|=+|...+-+.+.+ -++..||-
T Consensus 25 iG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~l----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 96 (260)
T 3awd_A 25 IGLACVTALAEAGARVIIADLDEAMAT-KAVEDL----RMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVA 96 (260)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHH----HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHH----HhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 347788999999999988765554332 222222 23355666777777777665544433 26766664
No 499
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=34.94 E-value=72 Score=23.41 Aligned_cols=68 Identities=12% Similarity=-0.015 Sum_probs=32.8
Q ss_pred ceEEEEecCCCccHHHHHHHHHHHHhh-ccCcceEEEEcCCc-----chHHHHHHHHHcCC---eEEEEcCC-CchHHHh
Q 045172 73 WFWVRMVLVKPQDADVLLRNYMVAMVD-KRRFGCLVVVSDDS-----DFVEVFQEATLRWL---KMVVVGDM-SDGALKR 142 (157)
Q Consensus 73 Gv~V~~V~dkpqAAD~AL~~~~~~~~~-~r~v~clvLVSDDs-----DF~~~lr~Arer~l---~tVVVGd~-~~~~L~r 142 (157)
|+.+-.++..|... ...+.+.+. ..-++. ++.|++. +=..+...+++-|+ .+++|||+ +|-.-.+
T Consensus 107 g~~~~i~t~~~~~~----~~~~l~~~gl~~~f~~-~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~ 181 (253)
T 1qq5_A 107 PLKRAILSNGAPDM----LQALVANAGLTDSFDA-VISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAK 181 (253)
T ss_dssp TSEEEEEESSCHHH----HHHHHHHTTCGGGCSE-EEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCcCHHH----HHHHHHHCCchhhccE-EEEccccCCCCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHH
Confidence 99888889888631 222222210 111343 3345542 21122233333454 58999998 3333344
Q ss_pred hhh
Q 045172 143 IAN 145 (157)
Q Consensus 143 ~AD 145 (157)
.|.
T Consensus 182 ~aG 184 (253)
T 1qq5_A 182 NFG 184 (253)
T ss_dssp HHT
T ss_pred HCC
Confidence 444
No 500
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=34.92 E-value=63 Score=23.53 Aligned_cols=19 Identities=5% Similarity=-0.290 Sum_probs=13.7
Q ss_pred cHHHHHhhceEEEEecCCCc
Q 045172 65 FADELKRAWFWVRMVLVKPQ 84 (157)
Q Consensus 65 la~eLrRAGv~V~~V~dkpq 84 (157)
+-.+|+..| .+-.|+.+|.
T Consensus 104 ~l~~l~~~g-~~~i~Tn~~~ 122 (231)
T 2p11_A 104 ALRHLGARG-PTVILSDGDV 122 (231)
T ss_dssp HHHHHHTTS-CEEEEEECCS
T ss_pred HHHHHHhCC-CEEEEeCCCH
Confidence 345677888 7778888776
Done!