BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045184
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCR 85
CAICL F DDET R+ C+H+FH +CID WLE ++TCP+CR
Sbjct: 128 CAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCR 170
>sp|Q9LS99|ATL77_ARATH RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2
SV=1
Length = 220
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 22 KMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTC 81
KM +VNY E C ICL F E R+ CNH FHL CID WL ++TC
Sbjct: 110 KMLPVVNYS-PEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTC 168
Query: 82 PLCRNCILD 90
P CR+C++D
Sbjct: 169 PKCRHCLVD 177
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 32 QETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRN 86
+E+ S CAICL D ET R+ +CNH+FH++CID WL + TCP+CR+
Sbjct: 113 KESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRS 167
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCR 85
CAICL F DDET R+ C+H+FH +CI WL+ ++TCP+CR
Sbjct: 124 CAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCR 166
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 65.9 bits (159), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRNCIL 89
CA+CL F++ + R+ +C+H FHLNCID WL+ N TCPLCR +
Sbjct: 143 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLF 189
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRNCI 88
CA+CL F+D + R+ VC+H FHL+CID WL N TCPLCR +
Sbjct: 207 CAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL 252
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 29/43 (67%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCR 85
C++CL F DDET R+ C H+FH CID WL + TCPLCR
Sbjct: 144 CSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCR 186
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 29 YKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRNCI 88
+ T + + CAICL F+D++T R+ VC H FH NCID W E++ TCP+CR C
Sbjct: 89 FHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCR-CE 147
Query: 89 LDA 91
LD
Sbjct: 148 LDP 150
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 27/43 (62%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCR 85
C +CL F DDET R+ C H+FH CID WL TCPLCR
Sbjct: 118 CPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCR 160
>sp|Q6NML0|ATL76_ARATH E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76
PE=1 SV=1
Length = 225
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 22 KMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTC 81
+M +V+Y R E C ICL F E R+ CNH FH+ CID WL+ +LTC
Sbjct: 115 RMFPVVSYSR-EMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTC 173
Query: 82 PLCRNCILD 90
P CR+C+++
Sbjct: 174 PKCRHCLVE 182
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 2 LNRF-VQTSEERQRQREQTLNKMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFL 60
+NR VQ E+ + ++ + K++ + +T +SSS S CAICLE + D E R+ +
Sbjct: 160 MNRMAVQALEKMETRKFKAKGKVSREGSCGGLDTLSSSSISDCAICLEKYIDGEELRV-I 218
Query: 61 VCNHIFHLNCIDGWLEINLTCPLCRNCILD 90
C H FH C+D WL N TCP CR+ I++
Sbjct: 219 PCTHRFHKRCVDPWLLQNHTCPHCRHNIIE 248
>sp|Q9C919|ATL19_ARATH Putative RING-H2 finger protein ATL19 OS=Arabidopsis thaliana
GN=ATL19 PE=3 SV=1
Length = 178
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 12 RQRQREQTLNKMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCI 71
+Q E L K+ ++ S S CAICL + +E CR+F VC HI+H CI
Sbjct: 99 KQSVIETLLPKLLVGQGNHEEDEEKSLESRECAICLSGYVVNEECRVFPVCRHIYHALCI 158
Query: 72 DGWLEINLTCPLCRN 86
D WL+ +LTCP CR
Sbjct: 159 DAWLKNHLTCPTCRK 173
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 22 KMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTC 81
+M +V+Y E C ICL F E R+ CNH FH+ CID WL+ +LTC
Sbjct: 115 RMFPVVSYS-PEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTC 173
Query: 82 PLCRNCILD 90
P CRNC+++
Sbjct: 174 PKCRNCLVE 182
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 6 VQTSEERQRQREQTLNKMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHI 65
T +R +++ L K + Y E +++ CAICL FAD E R+ CNH
Sbjct: 71 AGTVADRAGLKKRELKKFP-VAEYGSGEVKIAATE--CAICLGEFADGERVRVLPPCNHS 127
Query: 66 FHLNCIDGWLEINLTCPLCRNCILD 90
FH++CID WL + +CP CR+ +++
Sbjct: 128 FHMSCIDTWLVSHSSCPNCRHSLIE 152
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCR 85
CA+CL FAD + R+ C H+FH +CID WL +TCPLCR
Sbjct: 133 CAVCLAEFADSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCR 175
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 29 YKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRNCI 88
YK ++ SS C++CL F ++E+ R+ CNH FH+ CID WL+ + CPLCR I
Sbjct: 145 YKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFI 204
Query: 89 LDA 91
+ +
Sbjct: 205 VTS 207
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 19 TLNKMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEIN 78
+N +T +V +K+ E + C++CL F +DE+ R+ C+H FHLNCID WL +
Sbjct: 114 AINSIT-VVGFKKGEGIIDGTE--CSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSH 170
Query: 79 LTCPLCRNCIL 89
CPLCR +L
Sbjct: 171 KNCPLCRAPVL 181
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 5 FVQTSEERQRQREQTLNKMTHLVNYKRQETTT-----SSSSSGCAICLETFADDETCRIF 59
+ + E R +++ + + +K+++ S +S C++CL F +DE RI
Sbjct: 91 MIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRII 150
Query: 60 LVCNHIFHLNCIDGWLEINLTCPLCRNCI 88
C H+FH++CID WL+ N CPLCR +
Sbjct: 151 PNCCHVFHIDCIDIWLQGNANCPLCRTSV 179
>sp|Q9D304|RN128_MOUSE E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1
SV=1
Length = 428
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 4 RFVQTSEERQRQREQTLNKMT---HLVNYKRQETTTSSSSSGCAICLETFADDETCRIFL 60
R + +QRQ + K L K+ + CA+C+E + ++ RI L
Sbjct: 235 RNARAQSRKQRQLKADAKKAIGKLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRI-L 293
Query: 61 VCNHIFHLNCIDGWLEINLTCPLCRNCILDA 91
CNHIFH C+D WL + TCP+C+ IL A
Sbjct: 294 TCNHIFHKTCVDPWLLEHRTCPMCKCDILKA 324
>sp|Q8TEB7|RN128_HUMAN E3 ubiquitin-protein ligase RNF128 OS=Homo sapiens GN=RNF128 PE=1
SV=1
Length = 428
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 4 RFVQTSEERQRQREQTLNKMT---HLVNYKRQETTTSSSSSGCAICLETFADDETCRIFL 60
R + +QRQ + K L K+ + CA+C+E + ++ RI L
Sbjct: 235 RNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRI-L 293
Query: 61 VCNHIFHLNCIDGWLEINLTCPLCRNCILDA 91
CNHIFH C+D WL + TCP+C+ IL A
Sbjct: 294 TCNHIFHKTCVDPWLLEHRTCPMCKCDILKA 324
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 2 LNRF-VQTSEERQRQREQTLNKMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFL 60
+NR VQ E+ + ++ + +K + +T +S S+S CAICLE + D E R+ +
Sbjct: 248 MNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSGSTSDCAICLEKYIDGEELRV-I 306
Query: 61 VCNHIFHLNCIDGWLEINLTCPLCRNCILD 90
C H FH C+D WL + TCP CR+ I++
Sbjct: 307 PCTHRFHRKCVDPWLLQHHTCPHCRHNIIE 336
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 4 RFVQTSEERQRQREQTLNKMT---HLVNYKRQETTTSSSSSGCAICLETFADDETCRIFL 60
R + +QRQ + K L K+ + CA+C+E + ++ RI L
Sbjct: 235 RNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDREIGPDGDSCAVCIELYKPNDLVRI-L 293
Query: 61 VCNHIFHLNCIDGWLEINLTCPLCRNCILDA 91
CNHIFH C+D WL + TCP+C+ IL A
Sbjct: 294 TCNHIFHKTCVDPWLLEHRTCPMCKCDILKA 324
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 16 REQTLNKMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWL 75
++ +N +T + NYKR + + C +CL F +DE+ R+ CNH FH++CID WL
Sbjct: 153 QQSIINSIT-ICNYKRGDGLIERTD--CPVCLNEFEEDESLRLLPKCNHAFHISCIDTWL 209
Query: 76 EINLTCPLCRNCI 88
+ CPLCR I
Sbjct: 210 SSHTNCPLCRAGI 222
>sp|Q29RU0|RN128_BOVIN E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2
SV=1
Length = 431
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 4 RFVQTSEERQRQREQTLNKMT---HLVNYKRQETTTSSSSSGCAICLETFADDETCRIFL 60
R + +QRQ + K L K+ + CA+C+E + ++ RI L
Sbjct: 238 RNARAQSRKQRQLKADAKKAIGRLQLRTQKQGDKEIGPDGDSCAVCIELYKPNDLVRI-L 296
Query: 61 VCNHIFHLNCIDGWLEINLTCPLCRNCILDA 91
CNH+FH C+D WL + TCP+C+ IL A
Sbjct: 297 TCNHVFHKTCVDPWLLEHRTCPMCKCDILKA 327
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRNCI 88
C++CL F D E R+ C H FH+ CID WLE + TCPLCRN +
Sbjct: 124 CSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRV 169
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 17 EQTLNKMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLE 76
+ TL K K+ + + + C+ICL F +DE+ R+ CNH FH+ CID WL+
Sbjct: 129 DDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLK 188
Query: 77 INLTCPLCRNCIL 89
+ CPLCR I+
Sbjct: 189 SHSNCPLCRAKII 201
>sp|P0CH03|AT21C_ARATH Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana
GN=ATL21C PE=3 SV=1
Length = 366
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 10 EERQRQREQTLNKMTHLVNYKRQETTTSSSSSG-----CAICLETFADDETCRIFLVCNH 64
+ R+ + L++ T + +K+ E S SG C ICL +A ET R C+H
Sbjct: 283 QPREVMARRGLDQST-IETFKKMELGESRRLSGTNGIVCPICLSEYASKETVRFIPECDH 341
Query: 65 IFHLNCIDGWLEINLTCPLCRN 86
FH+ CID WL+I+ +CPLCRN
Sbjct: 342 CFHVECIDVWLKIHGSCPLCRN 363
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 29/43 (67%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCR 85
CAICL F D+ET R+ C+H FH +CID WL TCP+CR
Sbjct: 128 CAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCR 170
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
Query: 5 FVQTSEERQRQREQTLNKMTHLVNYKRQ------------ETTTSSSSSGCAICLETFAD 52
V + E R R ++++ + + +K++ E S C++CL F D
Sbjct: 88 MVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQD 147
Query: 53 DETCRIFLVCNHIFHLNCIDGWLEINLTCPLCR 85
+E RI C+H+FH++CID WL+ N CPLCR
Sbjct: 148 EEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCR 180
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRNCI 88
CA+CL F + ET R+ C H FH++CID W + TCPLCR+ +
Sbjct: 119 CAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV 164
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 4 RFVQTSEERQRQ----REQTLNKMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIF 59
R+ + QR+ ++ ++K+T K+ + T CA+C+E++ ++ RI
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLT-TRTVKKGDKETDPDFDHCAVCIESYKQNDVVRI- 279
Query: 60 LVCNHIFHLNCIDGWLEINLTCPLCRNCILDA 91
L C H+FH +C+D WL + TCP+C+ IL A
Sbjct: 280 LPCKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 29 YKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCR 85
YK + S C++CL F ++E+ R+ CNH FHL CID WL+ + CPLCR
Sbjct: 128 YKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 4 RFVQTSEERQRQ----REQTLNKMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIF 59
R+ + QR+ ++ ++K+T K+ + T CA+C+E++ ++ R+
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLT-TRTVKKGDKETDPDFDHCAVCIESYKQNDVVRV- 279
Query: 60 LVCNHIFHLNCIDGWLEINLTCPLCRNCILDA 91
L C H+FH +C+D WL + TCP+C+ IL A
Sbjct: 280 LPCKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRNCI 88
CA+CL D + R+ CNH FH++CID W + + TCPLCRN +
Sbjct: 120 CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 27 VNYKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRN 86
V+Y Q+ SS++S C+ICL + + R+ CNH+FH NC+D WL ++ TCP+CR
Sbjct: 115 VSYSLQKE--SSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRT 172
Query: 87 CILDA 91
L +
Sbjct: 173 SPLPS 177
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 22 KMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTC 81
+M +V+Y E C ICL F E R+ C+H FH+ CID WL+ +LTC
Sbjct: 116 RMFPVVSYS-PEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTC 174
Query: 82 PLCRNCILD 90
P CR+C+++
Sbjct: 175 PKCRHCLVE 183
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 4 RFVQTSEERQRQ----REQTLNKMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIF 59
R+ + QR+ ++ ++K+T K+ + T CA+C+E++ ++ R+
Sbjct: 222 RYTNARDRNQRRLGDAAKKAISKLT-TRTVKKGDKETDPDFDHCAVCIESYKQNDVVRV- 279
Query: 60 LVCNHIFHLNCIDGWLEINLTCPLCRNCILDA 91
L C H+FH +C+D WL + TCP+C+ IL A
Sbjct: 280 LPCKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 33 ETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRNCILD 90
E +++S CAICL + R CNH+FHL CID WL +N TCP+CR L
Sbjct: 137 EAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSPLP 194
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 35 TTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRNCIL 89
T++++ CA+CL F + + R +C H FHL CID WL + CPLCR IL
Sbjct: 148 TSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAIL 202
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 4 RFVQTSEERQRQREQTLNKMT---HLVNYKRQETTTSSSSSGCAICLETFADDETCRIFL 60
R + ++Q++ + K L K+ + CA+C+E + + RI L
Sbjct: 218 RLTRAQNKKQKRLKAEAKKAIGKLQLRTIKQGDKVLGPDGDSCAVCIEPYKPSDVVRI-L 276
Query: 61 VCNHIFHLNCIDGWLEINLTCPLCRNCILDA 91
CNH FH NCID WL + TCP+C+ IL +
Sbjct: 277 TCNHFFHKNCIDPWLLEHRTCPMCKCDILKS 307
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 17 EQTLNKMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLE 76
E +NK+T + Y+R + ++ C++CL F+D E+ R+ C+H FH CID WL+
Sbjct: 134 ETLINKIT-VCKYRRGDGFVHTTD--CSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLK 190
Query: 77 INLTCPLCR 85
+ CPLCR
Sbjct: 191 SHSNCPLCR 199
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 59.3 bits (142), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 30 KRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRNCIL 89
K + S ++ C IC E + +E RI L C H FH NCID W+ + TCP+C+ IL
Sbjct: 243 KEGDEEVSPNADSCVICFEAYKPNEIVRI-LTCKHFFHKNCIDPWILAHGTCPMCKCDIL 301
Query: 90 DA 91
A
Sbjct: 302 KA 303
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 26/43 (60%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCR 85
CAICL F D ET R C+H FH NCID WL TCP CR
Sbjct: 123 CAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACR 165
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 2 LNRFVQTSEE--RQRQREQTLNKMTHLV--NYKRQETTTSSSSSGCAICLETFADDETCR 57
+ RF+ T + Q R++T + L+ K E + CA+C+E F + R
Sbjct: 224 IQRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIR 283
Query: 58 IFLVCNHIFHLNCIDGWLEINLTCPLCRNCILDA 91
I L C HIFH CID WL + TCP+C+ ++ A
Sbjct: 284 I-LPCKHIFHRICIDPWLLDHRTCPMCKLDVIKA 316
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 35 TTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLC 84
++ SS+ CAICLE F++ + R+ + C H FH NC+D WL + TCPLC
Sbjct: 264 SSCSSAPVCAICLEEFSEGQELRV-ISCLHEFHRNCVDPWLHQHRTCPLC 312
>sp|P0CH02|AT21B_ARATH Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana
GN=ATL21B PE=3 SV=1
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 10 EERQRQREQTLNKMTHLVNYKRQETTTSSSSSG-----CAICLETFADDETCRIFLVCNH 64
+ R+ + L++ T + YK E S G C ICL + ET R C+H
Sbjct: 279 QPREVMATRGLDQST-IEKYKTMELGESRRPPGTNGIVCPICLSEYVSKETVRFIPECDH 337
Query: 65 IFHLNCIDGWLEINLTCPLCRN 86
FH CID WL+I+ +CPLCRN
Sbjct: 338 CFHAKCIDVWLKIHGSCPLCRN 359
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 22 KMTHLVNYKRQETTTSSSSSG----------CAICLETFADDETCRIFLVCNHIFHLNCI 71
K L + R T + S+SG CAICL FAD E R+ +C H FH+ CI
Sbjct: 71 KKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECI 130
Query: 72 DGWLEINLTCPLCR 85
D WL +CP CR
Sbjct: 131 DKWLVSRSSCPSCR 144
>sp|Q9C7E9|ATL20_ARATH RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2
SV=2
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 28 NYKRQETTTSSSSSG-----CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCP 82
+YK+ E S G C ICL +A ET R C+H FH+ CID WL+I+ +CP
Sbjct: 233 SYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCP 292
Query: 83 LCRN 86
+CRN
Sbjct: 293 VCRN 296
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 14 RQREQTLNKMTHLVNYKRQETTTSSSSSGCAICLETFADDETCRIFLVCNHIFHLNCIDG 73
+ R T + L +Y+ + S + C +C F + R+ L CNH FH C+D
Sbjct: 351 KPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRV-LPCNHEFHTKCVDK 409
Query: 74 WLEINLTCPLCR 85
WL+ N TCP+CR
Sbjct: 410 WLKANRTCPICR 421
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 43 CAICLETFADDETCRIFLVCNHIFHLNCIDGWLEINLTCPLCRN 86
C ICL F + ET ++ C H+FH++C+D WL +TCPLCR+
Sbjct: 140 CVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRS 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.135 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,395,763
Number of Sequences: 539616
Number of extensions: 956545
Number of successful extensions: 4892
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 4417
Number of HSP's gapped (non-prelim): 587
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)