BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045191
(135 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/142 (69%), Positives = 120/142 (84%), Gaps = 7/142 (4%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
YYQQESAKLRQQIQ +QNSNR+LMGDSLSSL+VKELKQ+ENRLE+ I+RIRSKKHE+LL
Sbjct: 89 YYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLV 148
Query: 61 EIEFLQKREIELENESVCLRSKIAEMERFQQAN--MVTGQELNAIHALASRNFFSPAIIE 118
EIE QKREIEL+NE++ LR+K+AE+ER+QQ + MV+G E+NAI ALASRN+F+ +I+
Sbjct: 149 EIENAQKREIELDNENIYLRTKVAEVERYQQHHHQMVSGSEINAIEALASRNYFAHSIMT 208
Query: 119 G-----GGTAYSHPDKKILHLG 135
G +YS PDKKILHLG
Sbjct: 209 AGSGSGNGGSYSDPDKKILHLG 230
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 92/123 (74%), Gaps = 10/123 (8%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
Y+QQE+AK+R QIQ LQN+NRHL+G+S+ ++T KELK LENRLE+GI+RIRSKKHE+L +
Sbjct: 91 YFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFS 150
Query: 61 EIEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHALASRNFFSPAIIEGG 120
EIE++QKRE +L+NE++ LR+K+AE ER + + ++ + +PA GG
Sbjct: 151 EIEYMQKREADLQNENMFLRAKVAEAERAEHDDQQAAED----------DEMAPAPAVGG 200
Query: 121 GTA 123
G++
Sbjct: 201 GSS 203
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5
PE=1 SV=1
Length = 246
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 84/104 (80%), Gaps = 6/104 (5%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
YYQQE++KLR+QI+ +QN NRH++G+SL SL KELK LE+RLE+GI+R+RSKKHEML+A
Sbjct: 104 YYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVA 163
Query: 61 EIEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIH 104
EIE++QKREIEL+N+++ LRSKI E QQ QE + IH
Sbjct: 164 EIEYMQKREIELQNDNMYLRSKITERTGLQQ------QESSVIH 201
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 85/96 (88%), Gaps = 2/96 (2%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
YYQQESAKLR QIQMLQN+N+HL+GD++S+L++KELKQLE+RLE+GI++IR++K+E+L +
Sbjct: 92 YYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLAS 151
Query: 61 EIEFLQKREIELENESVCLRSKIAEMERFQQANMVT 96
EI ++ KREIEL+N+++ LR+KIAE E QQ VT
Sbjct: 152 EINYMAKREIELQNDNMDLRTKIAEEE--QQLQQVT 185
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 96/138 (69%), Gaps = 5/138 (3%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
+YQQE++KLRQ+I +Q +NR++MG+SL SLTV++LK LE +LE+GI+RIRSKK+E+L A
Sbjct: 105 FYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFA 164
Query: 61 EIEFLQKREIELENESVCLRSKIAEMERFQQ-ANMVTGQ---ELNAIHALASRNFFSPAI 116
EIE++QK+EI+L N + LR+KIAE ER QQ N++ G EL + RN+
Sbjct: 165 EIEYMQKKEIDLHNNNQYLRAKIAENERAQQHMNLMPGSSDYELAPPQSFDGRNYIQLNG 224
Query: 117 IEGGGTAYSHPDKKILHL 134
++ YS D+ L L
Sbjct: 225 LQ-PNNHYSRQDQTALQL 241
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1
SV=2
Length = 252
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 89/135 (65%), Gaps = 10/135 (7%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
YYQQESAKLRQQI +QNSNR LMG+++ S++ KEL+ LE RLER ITRIRSKK+E+L +
Sbjct: 105 YYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFS 164
Query: 61 EIEFLQKREIELENESVCLRSKIAEMERFQQAN--MVTGQELNAI--------HALASRN 110
EI+++QKRE++L N++ LR+KIAE ER + M G + SRN
Sbjct: 165 EIDYMQKREVDLHNDNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPFDSRN 224
Query: 111 FFSPAIIEGGGTAYS 125
+F A ++ YS
Sbjct: 225 YFQVAALQPNNHHYS 239
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1
PE=1 SV=1
Length = 248
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 85/101 (84%), Gaps = 4/101 (3%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
YYQQE++KLR+QI+ +QNSNRH++G+SL SL KELK LE RLE+GI+R+RSKK+E+L+A
Sbjct: 104 YYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVA 163
Query: 61 EIEFLQKREIELENESVCLRSKIAEMERF----QQANMVTG 97
EIE++QKRE+EL++ ++ LR+KIAE R Q+++++ G
Sbjct: 164 EIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESSVIQG 204
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1
Length = 252
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 88/135 (65%), Gaps = 10/135 (7%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
YYQQESAKLRQQI +QNSNR LMG+++ S++ KEL+ LE RL+R + RIRSKK+E+L A
Sbjct: 105 YYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFA 164
Query: 61 EIEFLQKREIELENESVCLRSKIAEMERFQQAN--MVTGQELNAI--------HALASRN 110
EI+++QKRE++L N++ LR+KIAE ER + M G I SRN
Sbjct: 165 EIDYMQKREVDLHNDNQLLRAKIAENERNNPSMSLMPGGSNYEQIMPPPQTQPQPFDSRN 224
Query: 111 FFSPAIIEGGGTAYS 125
+F A ++ YS
Sbjct: 225 YFQVAALQPNNHHYS 239
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 94/125 (75%), Gaps = 7/125 (5%)
Query: 1 YYQQESAKLRQQIQMLQNSN-RHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLL 59
+YQQES+KLRQQI LQN+N R ++GDS++++++++LKQ+ENRLE+GI +IR++K+E+L
Sbjct: 89 HYQQESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLY 148
Query: 60 AEIEFLQKREIELENESVCLRSKIAEMERFQQA-NMVTGQELNAIHALA-----SRNFFS 113
AE+E++QKRE+EL+N+++ LRSK+ E ER QQ NM+ + + SRNF
Sbjct: 149 AEVEYMQKREVELQNDNMYLRSKVVENERGQQPLNMMGAASTSEYDHMVNNPYDSRNFLQ 208
Query: 114 PAIIE 118
I++
Sbjct: 209 VNIMQ 213
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1 SV=1
Length = 242
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 80/97 (82%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
YYQQE++KLR QI LQN NR+ +G+SL++L +++L+ LE ++E+GI++IR+KK+E+L A
Sbjct: 105 YYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFA 164
Query: 61 EIEFLQKREIELENESVCLRSKIAEMERFQQANMVTG 97
EIE++QKREI+L N + LR+KIAE ER QQ N++ G
Sbjct: 165 EIEYMQKREIDLHNNNQYLRAKIAETERSQQMNLMPG 201
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2
SV=1
Length = 248
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 80/105 (76%), Gaps = 4/105 (3%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
YYQQE++KLR QI L N NR++MG++L+ + +KELK LE R+E+GI++IRSKK+E+L A
Sbjct: 105 YYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFA 164
Query: 61 EIEFLQKREIELENESVCLRSKIAEMER----FQQANMVTGQELN 101
EIE++QKRE++L N + LR+KIAE ER QQ N++ G N
Sbjct: 165 EIEYMQKREVDLHNNNQYLRAKIAETERAQHQHQQMNLMPGSSSN 209
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 87/118 (73%), Gaps = 7/118 (5%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
+YQQE+AKL+QQI LQNSNR L+GD+++++ +ELKQLE RL++G+ +IR++K+E+L A
Sbjct: 131 HYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCA 190
Query: 61 EIEFLQKREIELENESVCLRSKIAEMER-FQQANMVTGQEL-----NAIHALASRNFF 112
EIE++Q+RE EL+N+++ L+SK+AE ER Q NM+ N IH RNF
Sbjct: 191 EIEYMQRRETELQNDNMYLKSKVAESERGLQTVNMMGSASTSEYVQNMIH-YDPRNFL 247
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 76/88 (86%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
YYQQE++KLR QI LQN NR+++G+SL++L++++LK LE ++E+GI++IRSKK+E+L A
Sbjct: 105 YYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFA 164
Query: 61 EIEFLQKREIELENESVCLRSKIAEMER 88
EIE++QKREI+L N + LR+KIAE ER
Sbjct: 165 EIEYMQKREIDLHNNNQYLRAKIAETER 192
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
++Q+E+A LRQQ+ LQ ++R LMG+ LS L VKEL+ LEN+LE + +R+KK +L+
Sbjct: 88 FWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLID 147
Query: 61 EIEFLQKREIELENESVCLRSKIA 84
EI L ++ + E++ L KI+
Sbjct: 148 EIHELNRKGSLVHQENMELYKKIS 171
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E L+ ++ LQ S R L+G+ L +LT+KEL+QLE++LE + IRSKK+++L
Sbjct: 91 WGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFES 150
Query: 62 IEFLQKREIELENESVCLRSKIAEMER 88
I LQK+E L+N++ L+ K+ E E+
Sbjct: 151 ISELQKKEKSLKNQNNVLQ-KLMETEK 176
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E L+ ++ LQ S R L+G+ L +LT+KEL+QLE++LE + IRSKK+++L
Sbjct: 91 WGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFES 150
Query: 62 IEFLQKREIELENESVCLRSKIAEMER 88
I LQK+E L+N++ L+ K+ E E+
Sbjct: 151 ISELQKKEKSLKNQNNVLQ-KLMETEK 176
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 17/136 (12%)
Query: 5 ESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEF 64
E AKL+ ++++LQ + +H +G+ L SL +KEL+ LE++L+ + IRS+K++++ I
Sbjct: 94 EHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISV 153
Query: 65 LQKREIELENESVCLRSKIAEMER-------FQQAN-------MVTGQELNAIH---ALA 107
LQK++ L+ ++ L K+ E E+ + Q N V Q+L++ H A
Sbjct: 154 LQKQDRALQEQNNQLSKKVKEREKEVAQQNQWDQQNHEINSSTFVLPQQLDSPHLGEAYQ 213
Query: 108 SRNFFSPAIIEGGGTA 123
+ N +EGG ++
Sbjct: 214 NTNVVDNGEVEGGNSS 229
>sp|Q2QQA3|MAD20_ORYSJ MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica
GN=MADS20 PE=2 SV=2
Length = 233
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 52/74 (70%)
Query: 8 KLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEFLQK 67
KLR +I+ L+ S R+LMG L SLT+++++QLEN+++ + IRS+K ++L+ + L+K
Sbjct: 100 KLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEK 159
Query: 68 REIELENESVCLRS 81
+ ELE C+R+
Sbjct: 160 KITELETLHTCIRA 173
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 77/134 (57%), Gaps = 10/134 (7%)
Query: 5 ESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEF 64
E AKL+ ++++L+ + R+ MG+ L SL++KEL+ LE++L+ I IRS+K++ + I
Sbjct: 94 EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISA 153
Query: 65 LQKREIELENESVCLRSKIAEMERF---QQANMVTGQELNAI-----HALASRNFFSPAI 116
LQK++ L++ + L KI E E+ Q+ +V +++ +SR+ F +
Sbjct: 154 LQKKDKALQDHNNSLLKKIKEREKKTGQQEGQLVQCSNSSSVLLPQYCVTSSRDGFVERV 213
Query: 117 I--EGGGTAYSHPD 128
GG ++ + P+
Sbjct: 214 GGENGGASSLTEPN 227
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 64/105 (60%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E ++L+ +I++L+ + RH +G+ L +++K+L+ LE +LE + IRS+K++++
Sbjct: 93 WSMEYSRLKAKIELLERNQRHYLGEDLEPMSLKDLQNLEQQLETALKHIRSRKNQLMYES 152
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHAL 106
+ LQ++E E++ E+ L +I E E + ++LN H +
Sbjct: 153 LNHLQRKENEIQEENSMLTKQIKERENILRTQQTQCEQLNRNHDV 197
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+Q+E+A LRQQ+ LQ S++ LMG+ LS L V++L+ LENRLE + IR +K +L +E
Sbjct: 88 WQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSE 147
Query: 62 IEFL 65
IE L
Sbjct: 148 IEEL 151
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 59/82 (71%)
Query: 4 QESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIE 63
QE KL+ +++ LQ + R+++G+ L L++KEL+QLEN++E + +IRS+K++ LL ++
Sbjct: 90 QEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLF 149
Query: 64 FLQKREIELENESVCLRSKIAE 85
L+ +E +L++ + LR K+ E
Sbjct: 150 DLKSKEQQLQDLNKDLRKKLQE 171
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 59/82 (71%)
Query: 4 QESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIE 63
QE KL+ +++ LQ + R+++G+ L L++KEL+QLEN++E + +IRS+K++ LL ++
Sbjct: 90 QEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLF 149
Query: 64 FLQKREIELENESVCLRSKIAE 85
L+ +E +L++ + LR K+ E
Sbjct: 150 DLKSKEQQLQDLNKDLRKKLQE 171
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum
GN=TDR4 PE=2 SV=1
Length = 227
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 74/124 (59%), Gaps = 9/124 (7%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E KL+ ++++LQ + +H +G+ L SL++KEL+ LE++L+ + IRS+K++++
Sbjct: 91 WTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHES 150
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHALASRNFF-----SPAI 116
I LQK++ L+ ++ L K+ E E+ A ++G +N+ A +F+ S +
Sbjct: 151 ISVLQKKDRALQEQNNQLSKKVKEREK--SAQQISG--INSSSLFAHTDFYLGTYQSTNV 206
Query: 117 IEGG 120
I+ G
Sbjct: 207 IDNG 210
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8
PE=2 SV=1
Length = 241
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%)
Query: 5 ESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEF 64
E AKL+ ++++L+ + R+ MG+ L SL++KEL+ LE++L I IRS+K++ + I
Sbjct: 94 EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISA 153
Query: 65 LQKREIELENESVCLRSKIAEMER 88
LQK++ L++ + L KI E E+
Sbjct: 154 LQKKDKVLQDHNNALLKKIKEREK 177
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 58/82 (70%)
Query: 4 QESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIE 63
QE KL+ +++ LQ + R+L+G+ L L++KEL+QLEN++E + IRS K++ LL ++
Sbjct: 94 QEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVF 153
Query: 64 FLQKREIELENESVCLRSKIAE 85
L+++E +L++ + L+ KI E
Sbjct: 154 ELKRKEQQLQDANKDLKRKIQE 175
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 58/82 (70%)
Query: 4 QESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIE 63
QE KL+ +++ LQ + R+L+G+ L L++KEL+QLEN++E + IRS K++ LL ++
Sbjct: 94 QEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVF 153
Query: 64 FLQKREIELENESVCLRSKIAE 85
L+++E +L++ + L+ KI E
Sbjct: 154 ELKRKEQQLQDANKDLKRKIQE 175
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
++Q+E+A L++Q+ LQ ++R +MG+ LS L+V+ L+ LEN+LE + +R KK +ML+
Sbjct: 88 FWQKEAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIE 147
Query: 61 EIEFLQKREIELENESVCLRSKIAEMERFQQANM 94
EI+ L + + E++ L K+ M Q NM
Sbjct: 148 EIQVLNREGNLVHQENLDLHKKVNLM---HQQNM 178
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 58/84 (69%)
Query: 3 QQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEI 62
+ E++ L ++I+ L+ S R L+G+ + + +++EL+QLEN+L+R ++RIR+KK+++L EI
Sbjct: 90 RDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEI 149
Query: 63 EFLQKREIELENESVCLRSKIAEM 86
E L+ E L E+ L+ K M
Sbjct: 150 EKLKAEERNLVKENKDLKEKWLGM 173
>sp|Q9SAR1|MADS8_ORYSJ MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica
GN=MADS8 PE=1 SV=1
Length = 248
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 5 ESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEF 64
E KL+ +++ LQ + R+L+G+ L +L +KEL+QLE +L+ + IRS + + +L ++
Sbjct: 96 EYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTD 155
Query: 65 LQKREIELENESVCLRSKIAEMER-----FQQANMVTGQELNAIHALASRNFFSPAIIEG 119
LQ+RE L + CLR K+ E + ++ + G E + HA+ +
Sbjct: 156 LQRREQMLCEANKCLRRKLEESNQLHGQVWEHGATLLGYERQSPHAVQQ-------VPPH 208
Query: 120 GGTAYSH 126
GG + H
Sbjct: 209 GGNGFFH 215
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp. pekinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 65/106 (61%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E ++L+ +I++L+ + RH +G+ L S+++KEL+ LE +L+ + IRS+K++++
Sbjct: 93 WSMEYSRLKAKIELLERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHES 152
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHALA 107
+ LQ++E E+ E+ L +I E E + + ++ N H +A
Sbjct: 153 LNHLQRKEKEILEENSMLTKQIKERESILRTHQNQSEQQNRSHHVA 198
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 65/106 (61%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E ++L+ +I++L+ + RH +G+ L S+++KEL+ LE +L+ + IRS+K++++
Sbjct: 93 WSMEYSRLKAKIELLERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHES 152
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHALA 107
+ LQ++E E+ E+ L +I E E + + ++ N H +A
Sbjct: 153 LNHLQRKEKEILEENSMLTKQIKERESILRTHQNQSEQQNRSHHVA 198
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2 SV=1
Length = 254
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 65/106 (61%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E ++L+ +I++L+ + RH +G+ L S+++KEL+ LE +L+ + IRS+K++++
Sbjct: 93 WSMEYSRLKAKIELLERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHES 152
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHALA 107
+ LQ++E E+ E+ L +I E E + + ++ N H +A
Sbjct: 153 LNHLQRKEKEILEENSMLTKQIKERESILRTHQNQSEQQNRSHHVA 198
>sp|Q6Q9H6|MAD34_ORYSJ MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica
GN=MADS34 PE=2 SV=2
Length = 239
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 58/84 (69%)
Query: 4 QESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIE 63
QE L+ +++LQ S R+L+G+ L+ L EL+QLE+++ R + +IRS+K ++LL E+
Sbjct: 93 QEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELC 152
Query: 64 FLQKREIELENESVCLRSKIAEME 87
L+++E L++ + L+ K+ E++
Sbjct: 153 DLKRKEQMLQDANRVLKRKLDEID 176
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 71/126 (56%), Gaps = 12/126 (9%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E +KL+ + + LQ + RHL+G+ L L+VKEL+QLE +LE +++ R +K ++++ +
Sbjct: 89 WYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQ 148
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHALASRNFFSPAIIEGGG 121
+E L+++E +L + L+ K+ V G N A+ ++ A++E G
Sbjct: 149 VEELRRKERQLGEINRQLKHKLE----------VEGSTSN-YRAMQQASWAQGAVVENGA 197
Query: 122 TAYSHP 127
AY P
Sbjct: 198 -AYVQP 202
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
++Q+E+A LRQ++ LQ ++R +MG+ L+ L+V EL LEN++E + IR +K ++L
Sbjct: 88 FWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQ 147
Query: 61 EIEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHALASRNFFS 113
EI+ L ++ + E++ L K+ +R Q N+ EL +A+ N F+
Sbjct: 148 EIQELSQKRNLIHQENLDLSRKV---QRIHQENV----ELYKKAYMANTNGFT 193
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 76/131 (58%), Gaps = 13/131 (9%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ QE ++L+ +++ LQ S RH++G+ L L++KEL+QLE +LE +++ R +K ++++ +
Sbjct: 91 WYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQ 150
Query: 62 IEFLQKREIELENESVCLRSKI-AEMERFQQANMVTGQELNAIHALASRNFFSPAIIEGG 120
++ L+++E +L + L++K+ AE + +N + + + +H ++ GG
Sbjct: 151 VDDLRRKERQLGELNKQLKNKLEAEAD---SSNCRSAIQDSWVHG---------TVVSGG 198
Query: 121 GTAYSHPDKKI 131
+ P I
Sbjct: 199 RVLNAQPPPDI 209
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var. italica
GN=CAL PE=2 SV=1
Length = 251
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 65/106 (61%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E ++L+ +I++L+ + RH +G+ L S+++KEL+ LE +L+ + IRS+K++++
Sbjct: 93 WSVEYSRLKAKIELLERNQRHYLGEDLESISIKELQNLEQQLDTSLKHIRSRKNQLMHES 152
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHALA 107
+ LQ++E E+ E+ L +I E E + + ++ N H +A
Sbjct: 153 LNHLQRKEKEILEENSMLAKQIRERESILRTHQNQSEQQNRSHHVA 198
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 62/100 (62%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E ++L+ +I++L+ + RH +G+ L +++K+L+ LE +LE + IRS+K++++
Sbjct: 93 WSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNES 152
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELN 101
+ LQ++E E++ E+ L +I E E + ++LN
Sbjct: 153 LNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQLN 192
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 56/83 (67%)
Query: 1 YYQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLA 60
++Q+E LRQQ+Q L ++NR L+G+ +S+ TV++L+ L+N++E + IR+KK ++L
Sbjct: 88 FWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAE 147
Query: 61 EIEFLQKREIELENESVCLRSKI 83
EI L ++ ++ E+ LR K
Sbjct: 148 EILKLNEKGSLVQKENSELRKKF 170
>sp|Q38694|AGL9_ARADE Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2
SV=1
Length = 250
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 3 QQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEI 62
QQE KL+ +++ LQ S R+L+G+ L L KEL+QLE +L+ + +IRS + + +L ++
Sbjct: 91 QQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQL 150
Query: 63 EFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHALASRNFFSPAIIEGGGT 122
LQ+RE L + L+ + E QAN + + HA+ + + G
Sbjct: 151 ADLQRREQMLCEANKTLKRRFEESS---QANQQQVWDPSNTHAVG----YGRQPAQHHGE 203
Query: 123 AYSHP 127
A+ HP
Sbjct: 204 AFYHP 208
>sp|Q39685|CMB1_DIACA MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1
Length = 233
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 57/82 (69%)
Query: 4 QESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIE 63
QE KL+ ++ +LQ S+R+L+G+ L L+ KEL+QLE++L++ + +IRS K + +L ++
Sbjct: 92 QEYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLA 151
Query: 64 FLQKREIELENESVCLRSKIAE 85
LQK+E L + L++K+ E
Sbjct: 152 DLQKKEEMLFESNRALKTKLEE 173
>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii
GN=SCM1 PE=2 SV=1
Length = 250
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 75/136 (55%), Gaps = 17/136 (12%)
Query: 5 ESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEF 64
E+AKL+ ++++LQ + + +G+ L SL +KEL+ LE++L + IRS+K++++ I
Sbjct: 94 ENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISV 153
Query: 65 LQKREIELENESVCLRSKIAEMER-------FQQAN-------MVTGQELNAIH---ALA 107
LQK++ L+ ++ L K+ E E+ + Q N V Q+L++ H A
Sbjct: 154 LQKQDRALQEQNNQLSKKVKEREKEVEQQNQWDQQNHEINSSTFVLPQQLDSPHLGEASQ 213
Query: 108 SRNFFSPAIIEGGGTA 123
+ N +EGG ++
Sbjct: 214 NTNVVDNGEVEGGNSS 229
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1 PE=2
SV=1
Length = 256
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 61/105 (58%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E +L+ +I++L+ + RH +G+ L +++ KEL+ LE +L+ + IRS+K++++
Sbjct: 91 WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYES 150
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHAL 106
I LQ++E ++ ++ L +I E E +A E N H +
Sbjct: 151 INELQRKEKAIQEQNSMLSKQIKERENVLRAQQEQWDEQNHGHNM 195
>sp|Q0J466|MADS7_ORYSJ MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica
GN=MADS7 PE=1 SV=2
Length = 249
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Query: 5 ESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEF 64
E KL+ +++ LQ + R+L+G+ L SL +KEL+ LE +L+ + +R+ + + L+ ++
Sbjct: 96 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 155
Query: 65 LQKREIELENESVCLRSKIAEMERFQQANMVTGQEL 100
LQ++E + + CLR K+ E +N V GQ++
Sbjct: 156 LQRKEQMVSEANRCLRRKLEE------SNHVRGQQV 185
>sp|P0C5B0|MADS7_ORYSI MADS-box transcription factor 7 OS=Oryza sativa subsp. indica
GN=MADS7 PE=2 SV=2
Length = 249
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Query: 5 ESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAEIEF 64
E KL+ +++ LQ + R+L+G+ L SL +KEL+ LE +L+ + +R+ + + L+ ++
Sbjct: 96 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 155
Query: 65 LQKREIELENESVCLRSKIAEMERFQQANMVTGQEL 100
LQ++E + + CLR K+ E +N V GQ++
Sbjct: 156 LQRKEQMVSEANRCLRRKLEE------SNHVRGQQV 185
>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
PE=1 SV=2
Length = 256
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 58/91 (63%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E +L+ +I++L+ + RH +G+ L +++ KEL+ LE +L+ + IR++K++++
Sbjct: 91 WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYES 150
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQA 92
I LQK+E ++ ++ L +I E E+ +A
Sbjct: 151 INELQKKEKAIQEQNSMLSKQIKEREKILRA 181
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 61/105 (58%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E +L+ +I++L+ + RH +G+ L +++ KEL+ LE +L+ + IRS+K++++
Sbjct: 91 WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDS 150
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHAL 106
I LQ++E ++ ++ L +I E E +A E N H +
Sbjct: 151 INELQRKEKAIQEQNSMLSKQIKERENVLRAQQEQWDEQNHGHNM 195
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 61/105 (58%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E +L+ +I++L+ + RH +G+ L +++ KEL+ LE +L+ + IRS+K++++
Sbjct: 91 WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDS 150
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHAL 106
I LQ++E ++ ++ L +I E E +A E N H +
Sbjct: 151 INELQRKEKAIQEQNSMLSKQIKERENVLRAQQEQWDEQNHGHNM 195
>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
italica GN=2AP1 PE=2 SV=1
Length = 256
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 61/105 (58%)
Query: 2 YQQESAKLRQQIQMLQNSNRHLMGDSLSSLTVKELKQLENRLERGITRIRSKKHEMLLAE 61
+ E +L+ +I++L+ + RH +G+ L +++ KEL+ LE +L+ + IRS+K++++
Sbjct: 91 WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRSRKNQLMYDS 150
Query: 62 IEFLQKREIELENESVCLRSKIAEMERFQQANMVTGQELNAIHAL 106
I LQ++E ++ ++ L +I E E +A E N H +
Sbjct: 151 INELQRKEKAIQEQNSMLSKQIKERENVLRAQQEQWDEQNHGHNM 195
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,509,246
Number of Sequences: 539616
Number of extensions: 1488631
Number of successful extensions: 7083
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 6786
Number of HSP's gapped (non-prelim): 524
length of query: 135
length of database: 191,569,459
effective HSP length: 100
effective length of query: 35
effective length of database: 137,607,859
effective search space: 4816275065
effective search space used: 4816275065
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)