BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045195
(411 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 28/242 (11%)
Query: 55 MGDGVTTFSVYGLFDGHNGSAAAIYTKENLLKNVLNAIPSELNR-----------DEWIS 103
+ D V F+VY DGH G AAA + ++ K +++ +P E N D+ S
Sbjct: 145 LTDEVLYFAVY---DGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFS 201
Query: 104 ALPRAXXXXXXXXXXXXXXXXII-EGWAITVGSVGDSRCILESAEGDIYYLSADHRLECN 162
+ R ++ +G + V SVGDSR IL +G L+ DH E
Sbjct: 202 SHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAIL-CRKGKPMKLTIDHTPE-R 259
Query: 163 EEERDRITACGGEVGRLNAGGGAEIGPLRCWPGGLCLSRSIGDMDVGEY-IVPVPHVKQV 221
++E++RI CGG V N+ G + G L ++RSIGD+D+ ++ P K++
Sbjct: 260 KDEKERIKKCGGFVA-WNSLGQPHVN------GRLAMTRSIGDLDLKTSGVIAEPETKRI 312
Query: 222 KLSTAGGR-LIISSDGVWDALSAEEALDCCRG-MQPEAAAAQIVKEAVQAKGLRDDTTCI 279
KL A L++++DG+ ++++E D P AA + ++A+Q G D++T +
Sbjct: 313 KLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQY-GTEDNSTAV 371
Query: 280 VI 281
V+
Sbjct: 372 VV 373
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 28/242 (11%)
Query: 55 MGDGVTTFSVYGLFDGHNGSAAAIYTKENLLKNVLNAIPSELNR-----------DEWIS 103
+ D V F+VY DGH G AAA + ++ K +++ +P E N D+ S
Sbjct: 31 LTDEVLYFAVY---DGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFS 87
Query: 104 ALPRAXXXXXXXXXXXXXXXXII-EGWAITVGSVGDSRCILESAEGDIYYLSADHRLECN 162
+ R ++ +G + V SVGDSR IL +G L+ DH E
Sbjct: 88 SHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAIL-CRKGKPMKLTIDHTPE-R 145
Query: 163 EEERDRITACGGEVGRLNAGGGAEIGPLRCWPGGLCLSRSIGDMDVGEY-IVPVPHVKQV 221
++E++RI CGG V N+ G + G L ++RSIGD+D+ ++ P K++
Sbjct: 146 KDEKERIKKCGGFVA-WNSLGQPHVN------GRLAMTRSIGDLDLKTSGVIAEPETKRI 198
Query: 222 KLSTAGGR-LIISSDGVWDALSAEEALDCCRGMQ-PEAAAAQIVKEAVQAKGLRDDTTCI 279
KL A L++++DG+ ++++E D P AA + ++A+Q G D++T +
Sbjct: 199 KLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQ-YGTEDNSTAV 257
Query: 280 VI 281
V+
Sbjct: 258 VV 259
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 114/270 (42%), Gaps = 55/270 (20%)
Query: 57 DGVTTFSVYGLFDGHNGSAAAIYTKEN----LLKNVLNAIPSELNRDEWISALPRAXXXX 112
D + +G++DGH GS A Y +E L + + P + D W+ +A
Sbjct: 50 DPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNS 109
Query: 113 XXXXXX-----------XXXXXXIIEGWAITVGSVGDSRCILESAEGDIYYLSADHRLEC 161
++ I V + GDSR +L + + LS DH+ +
Sbjct: 110 FLRVDSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALP-LSVDHKPD- 167
Query: 162 NEEERDRITACGGEVGRLNAGGGAEIGPLRCWPGGLCLSRSIGDMDVGEYIVPVPHVKQV 221
E+E RI A GG+V + N GA + G L +SRSIGD + I+P P V V
Sbjct: 168 REDEAARIEAAGGKVIQWN---GARVF------GVLAMSRSIGDRYLKPSIIPDPEVTAV 218
Query: 222 KLSTAGGRLIISSDGVWDALSAEEALDCCR--------------------------GMQP 255
K LI++SDGVWD ++ EEA + R G P
Sbjct: 219 KRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDP 278
Query: 256 EA--AAAQIVKEAVQAKGLRDDTTCIVIDI 283
A AA + K A+Q +G +D+ + +V+D+
Sbjct: 279 AAMSAAEYLSKLAIQ-RGSKDNISVVVVDL 307
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 114/270 (42%), Gaps = 55/270 (20%)
Query: 57 DGVTTFSVYGLFDGHNGSAAAIYTKEN----LLKNVLNAIPSELNRDEWISALPRAXXXX 112
D + +G++DGH GS A Y +E L + + P + D W+ +A
Sbjct: 47 DPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNS 106
Query: 113 XXXXXX-----------XXXXXXIIEGWAITVGSVGDSRCILESAEGDIYYLSADHRLEC 161
++ I V + GDSR +L + + LS DH+ +
Sbjct: 107 FLRVDSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALP-LSVDHKPD- 164
Query: 162 NEEERDRITACGGEVGRLNAGGGAEIGPLRCWPGGLCLSRSIGDMDVGEYIVPVPHVKQV 221
E+E RI A GG+V + N GA + G L +SRSIGD + I+P P V V
Sbjct: 165 REDEAARIEAAGGKVIQWN---GARVF------GVLAMSRSIGDRYLKPSIIPDPEVTAV 215
Query: 222 KLSTAGGRLIISSDGVWDALSAEEALDCCR--------------------------GMQP 255
K LI++SDGVWD ++ EEA + R G P
Sbjct: 216 KRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDP 275
Query: 256 EA--AAAQIVKEAVQAKGLRDDTTCIVIDI 283
A AA + K A+Q +G +D+ + +V+D+
Sbjct: 276 AAMSAAEYLSKLAIQ-RGSKDNISVVVVDL 304
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 110/262 (41%), Gaps = 54/262 (20%)
Query: 65 YGLFDGHNGSAAAIYTKEN----LLKNVLNAIPSELNRDEWISALPRA------------ 108
+G++DGH GS A Y +E L + ++ P + D W +A
Sbjct: 62 FGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSEI 121
Query: 109 -XXXXXXXXXXXXXXXXIIEGWAITVGSVGDSRCILESAEGDIYYLSADHRLECNEEERD 167
++ I V + GDSR +L + + LS DH+ + ++E
Sbjct: 122 ETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLA-LSVDHKPD-RDDEAA 179
Query: 168 RITACGGEVGRLNAGGGAEIGPLRCWPGGLCLSRSIGDMDVGEYIVPVPHVKQVKLSTAG 227
RI A GG+V R N GA + G L +SRSIGD + ++P P V V+
Sbjct: 180 RIEAAGGKVIRWN---GARVF------GVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKED 230
Query: 228 GRLIISSDGVWDALSAEEALDCCR-------------------------GMQPEA-AAAQ 261
LI++SDG+WD ++ EE D R G P A +AA+
Sbjct: 231 DCLILASDGLWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAE 290
Query: 262 IVKEAVQAKGLRDDTTCIVIDI 283
+ + KG +D+ + +V+D+
Sbjct: 291 YLSKMALQKGSKDNISVVVVDL 312
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 134/328 (40%), Gaps = 67/328 (20%)
Query: 1 MATRGEHQTVPLSVLLKRELANEKIEKPDIVHG--QASQSKKGEDFTLLKNECQRAMGDG 58
+ RG H +VPL + + E D V + QS G ++L D
Sbjct: 14 LVPRGSHMSVPLYGFT--SICGRRPEMEDAVSTIPRFLQSSSG---SMLDGRF-----DP 63
Query: 59 VTTFSVYGLFDGHNGSAAAIYTKEN----LLKNVLNAIPSELNRDEWISALPRAXXXXXX 114
+ +G++DGH GS A Y +E L + + P + D W+ +A
Sbjct: 64 QSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFL 123
Query: 115 XXXX-----------XXXXXXIIEGWAITVGSVGDSRCILESAEGDIYYLSADHRLECNE 163
++ I V + GDSR +L + + LS DH+ + E
Sbjct: 124 RVDSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALP-LSVDHKPD-RE 181
Query: 164 EERDRITACGGEVGRLNAGGGAEIGPLRCWPGGLCLSRSIGDMDVGEYIVPVPHVKQVKL 223
+E RI A GG+V + N GA + G L +SRSIGD + I+P P V VK
Sbjct: 182 DEAARIEAAGGKVIQWN---GARVF------GVLAMSRSIGDRYLKPSIIPDPEVTAVKR 232
Query: 224 STAGGRLIISSDGVWDALSAEEALDCCR--------------------------GMQPEA 257
LI++SDGVWD ++ EEA + R G P A
Sbjct: 233 VKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAA 292
Query: 258 --AAAQIVKEAVQAKGLRDDTTCIVIDI 283
AA + K A+Q +G +D+ + +V+D+
Sbjct: 293 MSAAEYLSKLAIQ-RGSKDNISVVVVDL 319
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 34/175 (19%)
Query: 131 ITVGSVGDSRCILESAEGDIYYLSADHRLECNEEERDRITACGGEVGRLNAGGGAEIGPL 190
I V + GDSR +L + + LS DH+ + E+E RI GG+V + GA +
Sbjct: 168 IVVSNCGDSRAVLFRGK-EAMPLSVDHKPD-REDEYARIENAGGKVIQWQ---GARVF-- 220
Query: 191 RCWPGGLCLSRSIGDMDVGEYIVPVPHVKQVKLSTAGGRLIISSDGVWDALSAEEALDCC 250
G L +SRSIGD + Y++P P V + S LI++SDG+WD ++ +E +
Sbjct: 221 ----GVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 276
Query: 251 R--------------------GMQP--EAAAAQIVKEAVQAKGLRDDTTCIVIDI 283
R G+ P +AAA + A+Q KG +D+ + IVID+
Sbjct: 277 RRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQ-KGSKDNISIIVIDL 330
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 32/174 (18%)
Query: 131 ITVGSVGDSRCILESAEGDIYYLSADHRLECNEEERDRITACGGEVGRLNAGGGAEIGPL 190
I V + GDSR +L + + LS DH+ + E+E RI GG+V + GA +
Sbjct: 171 IVVSNCGDSRAVLFRGK-EAMPLSVDHKPD-REDEYARIENAGGKVIQWQ---GARVF-- 223
Query: 191 RCWPGGLCLSRSIGDMDVGEYIVPVPHVKQVKLSTAGGRLIISSDGVWDALSAEEALDCC 250
G L +SRSIGD + Y++P P V + S LI++SDG+WD ++ +E +
Sbjct: 224 ----GVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 279
Query: 251 R----------GMQPEAAAAQIVKEAVQA-----------KGLRDDTTCIVIDI 283
R G P A + + A QA KG +D+ + IVID+
Sbjct: 280 RRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDL 333
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 32/174 (18%)
Query: 131 ITVGSVGDSRCILESAEGDIYYLSADHRLECNEEERDRITACGGEVGRLNAGGGAEIGPL 190
I V + GDSR +L + + LS DH+ + E+E RI GG+V + GA +
Sbjct: 178 IVVSNCGDSRAVLFRGK-EAMPLSVDHKPD-REDEYARIENAGGKVIQWQ---GARVF-- 230
Query: 191 RCWPGGLCLSRSIGDMDVGEYIVPVPHVKQVKLSTAGGRLIISSDGVWDALSAEEALDCC 250
G L +SRSIGD + Y++P P V + S LI++SDG+WD ++ +E +
Sbjct: 231 ----GVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 286
Query: 251 R----------GMQPEAAAAQIVKEAVQA-----------KGLRDDTTCIVIDI 283
R G P A + + A QA KG +D+ + IVID+
Sbjct: 287 RRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDL 340
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 32/174 (18%)
Query: 131 ITVGSVGDSRCILESAEGDIYYLSADHRLECNEEERDRITACGGEVGRLNAGGGAEIGPL 190
I V + GDSR +L + + LS DH+ + E+E RI GG+V + GA +
Sbjct: 169 IVVSNCGDSRAVLFRGK-EAMPLSVDHKPD-REDEYARIENAGGKVIQWQ---GARVF-- 221
Query: 191 RCWPGGLCLSRSIGDMDVGEYIVPVPHVKQVKLSTAGGRLIISSDGVWDALSAEEALDCC 250
G L +SRSIGD + Y++P P V + S LI++SDG+WD ++ +E +
Sbjct: 222 ----GVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 277
Query: 251 R----------GMQPEAAAAQIVKEAVQA-----------KGLRDDTTCIVIDI 283
R G P A + + A QA KG +D+ + IVID+
Sbjct: 278 RRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDL 331
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 32/174 (18%)
Query: 131 ITVGSVGDSRCILESAEGDIYYLSADHRLECNEEERDRITACGGEVGRLNAGGGAEIGPL 190
I V + GDSR +L + + LS DH+ + E+E RI GG+V + GA +
Sbjct: 165 IVVSNCGDSRAVLFRGK-EAMPLSVDHKPD-REDEYARIENAGGKVIQWQ---GARVF-- 217
Query: 191 RCWPGGLCLSRSIGDMDVGEYIVPVPHVKQVKLSTAGGRLIISSDGVWDALSAEEALDCC 250
G L +SRSIGD + Y++P P V + S LI++SDG+WD ++ +E +
Sbjct: 218 ----GVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 273
Query: 251 R----------GMQPEAAAAQIVKEAVQA-----------KGLRDDTTCIVIDI 283
R G P A + + A QA KG +D+ + IVID+
Sbjct: 274 RRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDL 327
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 32/174 (18%)
Query: 131 ITVGSVGDSRCILESAEGDIYYLSADHRLECNEEERDRITACGGEVGRLNAGGGAEIGPL 190
I V + GDSR +L + + LS DH+ + E+E RI GG+V + GA +
Sbjct: 154 IVVSNCGDSRAVLFRGK-EAMPLSVDHKPD-REDEYARIENAGGKVIQWQ---GARVF-- 206
Query: 191 RCWPGGLCLSRSIGDMDVGEYIVPVPHVKQVKLSTAGGRLIISSDGVWDALSAEEALDCC 250
G L +SRSIGD + Y++P P V + S LI++SDG+WD ++ +E +
Sbjct: 207 ----GVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIA 262
Query: 251 R----------GMQPEAAAAQIVKEAVQA-----------KGLRDDTTCIVIDI 283
R G P A + + A QA KG +D+ + IVID+
Sbjct: 263 RRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDL 316
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 53/259 (20%)
Query: 58 GVTTFSVYGLFDGHNGSAAAIYTKENLLKNVLN--------AIPSE-----------LNR 98
G+ ++S + ++DGH GS A Y E+LL ++ N PS L
Sbjct: 49 GLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEI 108
Query: 99 DEWISALPRAXXXXXXXXXXXXXXXXIIEGWAITVGSVGDSRCILESAEGDIYYLSADHR 158
DE + + + +I + GDSR +L +++ + DH+
Sbjct: 109 DEHMRVM--SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLL-CRNRKVHFFTQDHK 165
Query: 159 LECNEEERDRITACGGEV--GRLNAGGGAEIGPLRCWPGGLCLSRSIGDMDVG------- 209
N E++RI GG V R+N G L +SR++GD D
Sbjct: 166 -PSNPLEKERIQNAGGSVMIQRVN--------------GSLAVSRALGDFDYKCVHGKGP 210
Query: 210 --EYIVPVPHVKQVKLSTAGGRLII-SSDGVWDALSAEEALDCCRG-MQPEAAAAQIVKE 265
+ + P P V ++ S + II + DG+WD + EE D R ++ ++ E
Sbjct: 211 TEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNE 270
Query: 266 AVQA---KGLRDDTTCIVI 281
V KG RD+ + I+I
Sbjct: 271 VVDTCLYKGSRDNMSVILI 289
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 53/259 (20%)
Query: 58 GVTTFSVYGLFDGHNGSAAAIYTKENLLKNVLN--------AIPSE-----------LNR 98
G+ ++S + ++DGH GS A Y E+LL ++ N PS L
Sbjct: 49 GLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEI 108
Query: 99 DEWISALPRAXXXXXXXXXXXXXXXXIIEGWAITVGSVGDSRCILESAEGDIYYLSADHR 158
DE + + + +I + GDSR +L +++ + DH+
Sbjct: 109 DEHMRVM--SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLL-CRNRKVHFFTQDHK 165
Query: 159 LECNEEERDRITACGGEV--GRLNAGGGAEIGPLRCWPGGLCLSRSIGDMDVG------- 209
N E++RI GG V R+N G L +SR++GD D
Sbjct: 166 -PSNPLEKERIQNAGGSVMIQRVN--------------GSLAVSRALGDFDYKCVHGKGP 210
Query: 210 --EYIVPVPHVKQVKLSTAGGRLII-SSDGVWDALSAEEALDCCRG-MQPEAAAAQIVKE 265
+ + P P V ++ S + II + DG+WD + EE D R ++ ++ E
Sbjct: 211 TEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNE 270
Query: 266 AVQA---KGLRDDTTCIVI 281
V KG RD+ + I+I
Sbjct: 271 VVDTCLYKGSRDNMSVILI 289
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 90/221 (40%), Gaps = 49/221 (22%)
Query: 58 GVTTFSVYGLFDGHNGSAAAIYTKENLLK-----------------------NVLNAIPS 94
G+ +S + ++DGH GS A Y +LL+ NV N I +
Sbjct: 51 GLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRT 110
Query: 95 E-LNRDEWISALPRAXXXXXXXXXXXXXXXXIIEGWAITVGSVGDSRCILESAEGDIYYL 153
L DE++ + +I I + GDSR +L G + +
Sbjct: 111 GFLKIDEYMRNF--SDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYR-NGQVCFS 167
Query: 154 SADHRLECNEEERDRITACGGEVGRLNAGGGAEIGPLRCWPGGLCLSRSIGDMDVG---- 209
+ DH+ CN E++RI NAGG I + G L +SR++GD D
Sbjct: 168 TQDHK-PCNPREKERIQ---------NAGGSVMIQRVN---GSLAVSRALGDYDYKCVDG 214
Query: 210 -----EYIVPVPHVKQVKLSTAGGRLIISSDGVWDALSAEE 245
+ + P P V ++ + +I++ DG+WD +S EE
Sbjct: 215 KGPTEQLVSPEPEVYEILRAEEDEFIILAXDGIWDVMSNEE 255
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 41/166 (24%)
Query: 125 IIEGWAITVGSVGDSRCILESAEGDIYYLSADHRLECNEEERDRITACGGEV---GRLNA 181
++ G + V + GDSRC++ G +S DH+ E + E RI GG V GR+N
Sbjct: 138 LLHGKDLYVANAGDSRCVV-CRNGKALEMSFDHKPE-DTVEYQRIEKAGGRVTLDGRVN- 194
Query: 182 GGGAEIGPLRCWPGGLCLSRSIGDMDVG---------EYIVPVPHVKQVKLSTAGGRLII 232
GGL LSR+IGD + I +P ++++ + +++
Sbjct: 195 -------------GGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVL 241
Query: 233 SSDGVWDALSAEEALDCCRGMQPEAAAAQIVKEAVQAKGLRDDTTC 278
+ DG+W+ +++E+ + Q V+E + G++ C
Sbjct: 242 ACDGIWNFMTSEQVV-------------QFVQERINKPGMKLSKIC 274
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 14/133 (10%)
Query: 131 ITVGSVGDSRCI--LESAEG-DIYYLSADHRLECNEEERDRITACGGEVGRLNA------ 181
+ VG +GDSR +E+ G + +L+ DH+ + E+ RI GG V L+
Sbjct: 150 VAVGHLGDSRIAXGVETPNGLNCEFLTVDHKPDX-PHEKLRIXRNGGSVEYLHNHNNKPF 208
Query: 182 --GGGAEIGPLRC-WPGGLCLSRSIGDMDVGEY-IVPVPHVKQVKLSTAGGRLIISSDGV 237
GG R P L SR+ G D+ Y + P V+ V+++ I+++DG+
Sbjct: 209 IRGGDFSFRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRVXILATDGL 268
Query: 238 WDALSAEEALDCC 250
WD SA +A++
Sbjct: 269 WDVXSAAQAVEIA 281
>pdb|2JFR|A Chain A, Crystal Structure Of The Ppm Ser-Thr Phosphatase Mspp From
Mycobacterium Smegmatis In Complex With Phosphate At
0.83 A Resolution
pdb|2JFS|A Chain A, Crystal Structure Of The Ppm Ser-Thr Phosphatase Mspp From
Mycobacterium Smegmatis In Complex With Cacodylate
pdb|2JFT|A Chain A, Crystal Structure Of The Ppm Ser-Thr Phosphatase Mspp From
Mycobacterium Smegmatis In Complex With Sulfate
pdb|2V06|A Chain A, Crystal Structure Of The Ppm Ser-Thr Phosphatase Mspp From
Mycobacterium Smegmatis At Ph 5.5
Length = 234
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 227 GGRLIISSDGVWDALSAEEAL--DCCRGMQPEAAAAQIVKEAVQAKGLRDDTTCIVIDI 283
G RL+ISSDG++ A A+EAL D P+ A ++V+ A A G D+TT +VID+
Sbjct: 178 GDRLLISSDGLFAA--ADEALIVDAATSPDPQVAVRRLVEVANDAGG-SDNTTVVVIDL 233
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 19/101 (18%)
Query: 129 WAITVGSVGDSRCILESAEGDIYYLSADHRLECNEEERDRITACGGEVGRLNAGGGAEIG 188
+ +T ++GDSR L ++G + LS DH+ + E RI AGG E
Sbjct: 173 FLVTAINIGDSRATLIHSDGGLTRLSKDHK-PNHPTEASRIE---------KAGGSVETF 222
Query: 189 PLRCWPGGLCLSRSIGDMDVG---------EYIVPVPHVKQ 220
+ G L LSR+ GD D + ++ VP V+Q
Sbjct: 223 DVPRVDGVLALSRAFGDSDFKXNPNLPPEEQKVIAVPDVRQ 263
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 129 WAITVGSVGDSRCILESAEGDIYYLSADHRLECNEEERDRITACGGEVGRLN 180
+ I V S+G+SRC+L+S I +LS H + +ER R+ A GG +N
Sbjct: 166 YTIHVASLGNSRCVLKSGRTAI-HLSTPH-TASSHKERHRVQAAGGVFTTVN 215
>pdb|3E78|A Chain A, Structure Determination Of The Cancer-Associated
Mycoplasma Hyorhinis Protein Mh-P37
pdb|3E79|A Chain A, Structure Determination Of The Cancer-Associated
Mycoplasma Hyorhinis Protein Mh-P37
pdb|3EKI|A Chain A, Structural Insights Of The Mycoplasma Hyorhinis Protein
Mh-P37: A Putative Thiamine Pyrophosphate Transporter
Length = 403
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 40 KGEDFTLLKNECQRAMGD-GVTTFSVYGLFDGHNGSAAAIYTKENLLKNVLNAIPSELNR 98
KG D TL K ++A D TF +G+ G + S++ +E +LKN + LN
Sbjct: 222 KGNDETLAK--IKKAWNDKDWNTFRNFGILHGKDNSSSKFKLEETILKNHFQNKFTTLNE 279
Query: 99 DEWISALPRA 108
D SA P A
Sbjct: 280 DR--SAHPNA 287
>pdb|1YEU|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37g Oxy (10 Test Sets)
pdb|1YEU|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37g Oxy (10 Test Sets)
pdb|1Y4G|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37g Deoxy Low-Salt (10 Test Sets)
pdb|1Y4G|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37g Deoxy Low-Salt (10 Test Sets)
Length = 146
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 159 LECNEEERDRITACGGEVGRLNAGGGAEIGPLRCWPGGLCLSRSIGDMDVGEYIVPVPHV 218
+ EE+ +TA G+V GG A L +PG S GD+ + ++ P V
Sbjct: 1 MHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPGTQRFFESFGDLSTPDAVMGNPKV 60
Query: 219 K 219
K
Sbjct: 61 K 61
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,443,778
Number of Sequences: 62578
Number of extensions: 447036
Number of successful extensions: 1138
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1085
Number of HSP's gapped (non-prelim): 44
length of query: 411
length of database: 14,973,337
effective HSP length: 101
effective length of query: 310
effective length of database: 8,652,959
effective search space: 2682417290
effective search space used: 2682417290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)