Query 045196
Match_columns 255
No_of_seqs 382 out of 1227
Neff 11.2
Searched_HMMs 46136
Date Fri Mar 29 10:46:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045196.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045196hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00898 2A0119 cation transp 99.9 7.5E-22 1.6E-26 166.1 20.0 191 26-224 314-504 (505)
2 KOG0253 Synaptic vesicle trans 99.9 9.1E-23 2E-27 156.6 12.9 189 23-222 311-527 (528)
3 TIGR01299 synapt_SV2 synaptic 99.9 5E-21 1.1E-25 164.5 17.6 140 73-222 601-741 (742)
4 KOG0569 Permease of the major 99.9 3E-21 6.4E-26 156.9 14.0 205 23-232 253-472 (485)
5 TIGR00887 2A0109 phosphate:H+ 99.8 3.6E-19 7.8E-24 149.6 16.8 194 26-225 272-499 (502)
6 KOG0252 Inorganic phosphate tr 99.7 1.2E-18 2.7E-23 137.7 4.8 195 28-228 294-511 (538)
7 PRK10642 proline/glycine betai 99.7 1.3E-16 2.7E-21 133.8 16.8 189 25-222 238-437 (490)
8 TIGR01299 synapt_SV2 synaptic 99.7 3.5E-16 7.5E-21 135.0 15.1 150 59-218 191-358 (742)
9 KOG0255 Synaptic vesicle trans 99.7 2.9E-15 6.3E-20 126.7 19.9 199 24-230 307-508 (521)
10 PF00083 Sugar_tr: Sugar (and 99.7 8.3E-20 1.8E-24 151.6 -8.4 201 26-227 239-449 (451)
11 PRK09952 shikimate transporter 99.7 4.5E-15 9.6E-20 122.8 18.4 138 75-218 294-436 (438)
12 TIGR00887 2A0109 phosphate:H+ 99.7 2.3E-15 5.1E-20 126.6 16.1 143 73-219 62-229 (502)
13 TIGR00889 2A0110 nucleoside tr 99.7 3.9E-15 8.5E-20 122.3 16.4 187 27-220 200-408 (418)
14 TIGR02332 HpaX 4-hydroxyphenyl 99.7 1.3E-14 2.9E-19 119.1 19.1 151 59-219 32-194 (412)
15 TIGR00900 2A0121 H+ Antiporter 99.7 7.5E-15 1.6E-19 118.4 16.5 166 44-214 8-178 (365)
16 TIGR00895 2A0115 benzoate tran 99.6 9.2E-15 2E-19 119.2 16.4 151 58-218 40-196 (398)
17 COG2271 UhpC Sugar phosphate p 99.6 1E-14 2.2E-19 114.9 15.8 171 31-212 248-431 (448)
18 KOG0254 Predicted transporter 99.6 3.1E-14 6.8E-19 120.0 18.9 204 27-231 283-500 (513)
19 TIGR00891 2A0112 putative sial 99.6 1.9E-14 4.2E-19 117.7 16.6 149 60-218 37-192 (405)
20 PRK11663 regulatory protein Uh 99.6 1.1E-14 2.4E-19 120.4 15.2 150 58-217 46-201 (434)
21 PRK10054 putative transporter; 99.6 7E-14 1.5E-18 114.2 18.5 161 48-218 20-186 (395)
22 COG2271 UhpC Sugar phosphate p 99.6 5.8E-15 1.3E-19 116.3 11.3 153 59-221 53-216 (448)
23 PRK10213 nepI ribonucleoside t 99.6 7.9E-14 1.7E-18 113.9 18.3 148 61-218 46-199 (394)
24 PRK10473 multidrug efflux syst 99.6 7.9E-14 1.7E-18 113.9 18.1 152 58-219 26-183 (392)
25 PRK09556 uhpT sugar phosphate 99.6 7.8E-14 1.7E-18 116.4 18.3 176 31-214 254-448 (467)
26 PRK10489 enterobactin exporter 99.6 4.1E-14 9E-19 116.4 16.4 190 27-227 216-412 (417)
27 TIGR00893 2A0114 d-galactonate 99.6 1.2E-14 2.7E-19 118.2 13.2 149 60-218 19-173 (399)
28 PRK10489 enterobactin exporter 99.6 1.5E-14 3.3E-19 119.0 13.6 188 26-218 8-200 (417)
29 TIGR00890 2A0111 Oxalate/Forma 99.6 3.9E-14 8.4E-19 114.7 15.6 173 27-207 197-374 (377)
30 PF07690 MFS_1: Major Facilita 99.6 4.7E-14 1E-18 113.2 15.7 147 60-216 22-174 (352)
31 PRK03545 putative arabinose tr 99.6 1.4E-13 2.9E-18 112.4 18.4 148 60-217 34-187 (390)
32 TIGR00879 SP MFS transporter, 99.6 3.9E-14 8.4E-19 118.2 15.3 139 73-218 77-220 (481)
33 TIGR00710 efflux_Bcr_CflA drug 99.6 7.8E-14 1.7E-18 113.4 16.7 150 60-219 30-185 (385)
34 PRK10077 xylE D-xylose transpo 99.6 9.8E-14 2.1E-18 116.2 17.6 148 72-225 311-468 (479)
35 TIGR00898 2A0119 cation transp 99.6 3.8E-14 8.2E-19 119.5 14.9 135 73-218 133-267 (505)
36 TIGR00903 2A0129 major facilit 99.6 5.5E-14 1.2E-18 113.5 15.2 178 27-216 184-366 (368)
37 PLN00028 nitrate transmembrane 99.6 2E-13 4.3E-18 114.2 19.0 145 61-216 62-220 (476)
38 PRK11195 lysophospholipid tran 99.6 7.5E-14 1.6E-18 114.0 15.9 147 59-218 27-177 (393)
39 PRK12307 putative sialic acid 99.6 7E-14 1.5E-18 115.4 15.3 136 55-200 38-178 (426)
40 PRK11551 putative 3-hydroxyphe 99.6 1E-13 2.2E-18 113.8 16.0 149 60-218 40-194 (406)
41 PRK10406 alpha-ketoglutarate t 99.6 2.9E-13 6.2E-18 112.0 18.8 186 26-221 233-429 (432)
42 PRK10077 xylE D-xylose transpo 99.6 5.4E-14 1.2E-18 117.8 14.6 145 74-218 62-218 (479)
43 PRK03893 putative sialic acid 99.6 1.2E-13 2.7E-18 116.1 16.8 149 59-217 44-197 (496)
44 KOG0255 Synaptic vesicle trans 99.6 3.8E-14 8.3E-19 119.9 13.4 138 71-219 122-259 (521)
45 PRK15403 multidrug efflux syst 99.6 1.2E-13 2.7E-18 113.4 15.9 147 63-219 44-196 (413)
46 PRK11273 glpT sn-glycerol-3-ph 99.6 1.5E-13 3.2E-18 114.3 16.5 153 59-218 53-212 (452)
47 PRK05122 major facilitator sup 99.6 4.4E-13 9.5E-18 109.7 18.4 138 74-221 256-395 (399)
48 PRK10091 MFS transport protein 99.6 3.1E-13 6.7E-18 110.0 17.4 151 58-218 26-182 (382)
49 PRK11646 multidrug resistance 99.6 4E-13 8.7E-18 109.9 18.0 164 44-217 19-188 (400)
50 PRK11273 glpT sn-glycerol-3-ph 99.6 6.2E-13 1.3E-17 110.6 19.4 176 31-214 249-434 (452)
51 TIGR00711 efflux_EmrB drug res 99.6 1.6E-13 3.5E-18 115.1 16.0 156 53-218 20-181 (485)
52 TIGR00879 SP MFS transporter, 99.6 1.3E-13 2.9E-18 115.0 15.2 164 59-222 308-478 (481)
53 TIGR00899 2A0120 sugar efflux 99.6 4.6E-13 1E-17 108.6 17.7 178 27-215 191-374 (375)
54 PLN00028 nitrate transmembrane 99.6 8.4E-14 1.8E-18 116.4 13.6 142 63-215 281-433 (476)
55 PRK12307 putative sialic acid 99.6 4.6E-13 9.9E-18 110.6 17.6 154 27-189 220-380 (426)
56 COG2814 AraJ Arabinose efflux 99.6 5.2E-13 1.1E-17 106.2 16.8 168 38-215 12-189 (394)
57 PRK11551 putative 3-hydroxyphe 99.6 2.1E-13 4.6E-18 111.8 15.3 145 60-214 245-395 (406)
58 PRK15402 multidrug efflux syst 99.5 5E-13 1.1E-17 109.7 17.4 149 61-219 39-193 (406)
59 PRK14995 methyl viologen resis 99.5 4.5E-13 9.7E-18 112.6 17.4 156 53-218 24-186 (495)
60 PRK10406 alpha-ketoglutarate t 99.5 2.5E-13 5.3E-18 112.3 15.6 139 78-218 74-222 (432)
61 TIGR00880 2_A_01_02 Multidrug 99.5 3.2E-13 7E-18 93.7 13.5 130 77-216 8-140 (141)
62 PRK09528 lacY galactoside perm 99.5 1.9E-13 4.1E-18 112.7 14.1 129 75-213 270-401 (420)
63 PRK11102 bicyclomycin/multidru 99.5 3.2E-13 7E-18 109.6 15.2 148 61-218 17-170 (377)
64 PRK03699 putative transporter; 99.5 5.8E-13 1.3E-17 108.9 16.7 164 38-211 6-179 (394)
65 TIGR00881 2A0104 phosphoglycer 99.5 2.6E-14 5.6E-19 115.8 8.6 149 59-217 19-174 (379)
66 PRK10504 putative transporter; 99.5 7.1E-13 1.5E-17 110.9 17.4 167 40-216 11-187 (471)
67 PRK15462 dipeptide/tripeptide 99.5 3.1E-13 6.8E-18 111.8 14.9 162 40-210 10-184 (493)
68 TIGR00792 gph sugar (Glycoside 99.5 1.7E-12 3.6E-17 107.6 19.3 153 26-187 213-375 (437)
69 PRK11043 putative transporter; 99.5 1.6E-12 3.4E-17 106.6 18.6 147 61-217 32-183 (401)
70 TIGR00902 2A0127 phenyl propri 99.5 2.2E-12 4.7E-17 105.1 19.1 173 26-210 196-374 (382)
71 PRK11652 emrD multidrug resist 99.5 1.8E-12 3.9E-17 105.9 18.5 150 60-219 33-188 (394)
72 TIGR00924 yjdL_sub1_fam amino 99.5 4.1E-13 8.9E-18 112.0 14.8 141 65-215 43-192 (475)
73 TIGR00897 2A0118 polyol permea 99.5 1.4E-12 3.1E-17 106.8 17.7 181 27-214 214-400 (402)
74 KOG2615 Permease of the major 99.5 8.9E-14 1.9E-18 108.1 9.6 104 74-188 75-178 (451)
75 PRK10642 proline/glycine betai 99.5 3.2E-13 7E-18 113.4 13.8 131 78-218 68-216 (490)
76 TIGR00894 2A0114euk Na(+)-depe 99.5 1.6E-12 3.4E-17 108.6 17.8 142 65-214 71-218 (465)
77 TIGR00712 glpT glycerol-3-phos 99.5 4.8E-13 1E-17 110.8 13.9 148 64-217 55-209 (438)
78 TIGR00903 2A0129 major facilit 99.5 1.2E-12 2.6E-17 105.8 15.6 149 60-219 16-170 (368)
79 PRK09705 cynX putative cyanate 99.5 3.1E-12 6.8E-17 104.5 18.3 149 62-221 232-388 (393)
80 TIGR00893 2A0114 d-galactonate 99.5 1.2E-12 2.6E-17 106.5 15.8 180 25-211 205-395 (399)
81 KOG0569 Permease of the major 99.5 8.4E-13 1.8E-17 108.0 14.4 138 76-220 69-210 (485)
82 PRK11010 ampG muropeptide tran 99.5 4.7E-12 1E-16 106.2 19.2 157 55-218 32-198 (491)
83 PRK09952 shikimate transporter 99.5 1.8E-12 3.8E-17 107.4 15.8 131 78-218 75-223 (438)
84 KOG1330 Sugar transporter/spin 99.5 3.6E-14 7.8E-19 113.0 5.2 139 71-219 72-214 (493)
85 PRK11663 regulatory protein Uh 99.5 5.6E-12 1.2E-16 104.4 18.4 142 63-212 272-421 (434)
86 PRK15011 sugar efflux transpor 99.5 4.7E-12 1E-16 103.5 17.6 143 63-216 245-392 (393)
87 PRK09874 drug efflux system pr 99.5 4.2E-12 9E-17 104.2 17.4 132 75-217 62-196 (408)
88 PRK15034 nitrate/nitrite trans 99.5 4.1E-12 8.9E-17 104.2 16.6 186 25-214 242-453 (462)
89 PF11700 ATG22: Vacuole efflux 99.5 3.3E-12 7.2E-17 105.8 16.2 153 64-220 311-473 (477)
90 PRK10207 dipeptide/tripeptide 99.5 1.8E-12 3.9E-17 108.4 14.7 161 39-208 14-187 (489)
91 PRK03633 putative MFS family t 99.5 1.5E-11 3.1E-16 100.2 19.7 173 27-212 192-369 (381)
92 PRK05122 major facilitator sup 99.5 2E-12 4.4E-17 105.8 14.8 152 50-203 30-187 (399)
93 cd06174 MFS The Major Facilita 99.5 1.7E-12 3.6E-17 104.0 13.9 142 60-211 24-170 (352)
94 PRK09556 uhpT sugar phosphate 99.5 6.9E-13 1.5E-17 110.8 12.0 148 60-212 54-209 (467)
95 PRK03545 putative arabinose tr 99.5 8.5E-12 1.8E-16 101.9 17.8 178 26-214 196-379 (390)
96 PF05977 MFS_3: Transmembrane 99.5 7.5E-12 1.6E-16 104.8 17.7 180 30-214 5-189 (524)
97 TIGR00890 2A0111 Oxalate/Forma 99.5 8.9E-13 1.9E-17 106.7 11.8 144 62-216 30-179 (377)
98 PRK03633 putative MFS family t 99.5 8.7E-12 1.9E-16 101.5 17.5 127 52-188 23-152 (381)
99 TIGR00886 2A0108 nitrite extru 99.5 8E-12 1.7E-16 101.0 17.2 116 61-187 28-147 (366)
100 PRK10429 melibiose:sodium symp 99.5 2.2E-11 4.8E-16 101.8 20.2 157 26-187 222-388 (473)
101 PRK10504 putative transporter; 99.4 6.3E-12 1.4E-16 105.2 16.6 151 30-187 256-410 (471)
102 PRK12382 putative transporter; 99.4 5.9E-12 1.3E-16 102.9 15.9 125 62-188 43-170 (392)
103 PRK11010 ampG muropeptide tran 99.4 9.7E-12 2.1E-16 104.3 17.5 186 26-217 213-405 (491)
104 TIGR00900 2A0121 H+ Antiporter 99.4 3.6E-12 7.8E-17 102.8 14.4 154 26-188 201-359 (365)
105 PRK09848 glucuronide transport 99.4 2.4E-11 5.2E-16 101.1 19.6 154 26-187 219-383 (448)
106 COG2211 MelB Na+/melibiose sym 99.4 2.8E-11 6.2E-16 98.3 19.2 153 27-187 228-391 (467)
107 PRK12382 putative transporter; 99.4 1.6E-11 3.5E-16 100.3 17.7 128 75-212 257-386 (392)
108 PRK08633 2-acyl-glycerophospho 99.4 3.9E-12 8.5E-17 117.2 15.2 108 74-188 54-161 (1146)
109 PRK06814 acylglycerophosphoeth 99.4 7E-12 1.5E-16 115.4 16.8 181 29-218 5-198 (1140)
110 TIGR00885 fucP L-fucose:H+ sym 99.4 2E-11 4.4E-16 100.2 17.7 122 59-187 27-151 (410)
111 TIGR00883 2A0106 metabolite-pr 99.4 5.9E-12 1.3E-16 102.5 14.5 108 74-188 262-371 (394)
112 TIGR00892 2A0113 monocarboxyla 99.4 3.1E-12 6.6E-17 106.5 12.9 171 30-210 236-416 (455)
113 PRK15075 citrate-proton sympor 99.4 6.5E-12 1.4E-16 104.0 14.8 110 81-200 70-197 (434)
114 TIGR02718 sider_RhtX_FptX side 99.4 2.3E-11 4.9E-16 99.4 17.7 180 26-209 199-385 (390)
115 cd06174 MFS The Major Facilita 99.4 1.7E-11 3.7E-16 98.2 16.7 131 73-213 217-350 (352)
116 PRK15034 nitrate/nitrite trans 99.4 4.5E-11 9.7E-16 98.2 18.9 115 64-184 64-181 (462)
117 PRK11902 ampG muropeptide tran 99.4 3E-11 6.5E-16 99.1 18.0 161 52-219 16-186 (402)
118 PRK15075 citrate-proton sympor 99.4 2.7E-11 6E-16 100.3 17.5 117 65-188 269-390 (434)
119 PRK09705 cynX putative cyanate 99.4 1.5E-11 3.2E-16 100.6 15.5 137 60-207 34-176 (393)
120 TIGR00897 2A0118 polyol permea 99.4 2.6E-11 5.6E-16 99.5 16.9 135 48-188 26-164 (402)
121 PTZ00207 hypothetical protein; 99.4 4E-11 8.6E-16 101.2 18.2 145 62-211 54-201 (591)
122 TIGR00899 2A0120 sugar efflux 99.4 2.5E-11 5.4E-16 98.5 16.5 147 62-218 25-180 (375)
123 PRK11128 putative 3-phenylprop 99.4 7E-11 1.5E-15 96.2 18.8 172 25-207 195-371 (382)
124 PRK09874 drug efflux system pr 99.4 1.2E-11 2.6E-16 101.5 14.4 128 76-213 267-396 (408)
125 TIGR00882 2A0105 oligosacchari 99.4 2.3E-11 4.9E-16 99.6 15.6 175 26-210 206-390 (396)
126 PRK09584 tppB putative tripept 99.4 3.8E-11 8.2E-16 100.9 17.2 167 30-208 15-194 (500)
127 PF06609 TRI12: Fungal trichot 99.4 1.9E-11 4.2E-16 102.6 15.3 139 62-211 71-213 (599)
128 KOG3764 Vesicular amine transp 99.4 5.8E-12 1.3E-16 98.7 11.3 131 74-214 113-246 (464)
129 PRK09669 putative symporter Ya 99.4 9.8E-11 2.1E-15 97.3 19.5 155 25-187 219-383 (444)
130 TIGR00806 rfc RFC reduced fola 99.4 3.6E-11 7.9E-16 97.7 16.1 147 59-216 50-204 (511)
131 PF03825 Nuc_H_symport: Nucleo 99.4 1.5E-10 3.2E-15 94.3 19.8 153 27-188 199-360 (400)
132 TIGR00901 2A0125 AmpG-related 99.4 4.7E-11 1E-15 96.3 16.3 154 57-218 10-182 (356)
133 PRK03893 putative sialic acid 99.4 7.5E-12 1.6E-16 105.4 12.1 132 64-203 305-441 (496)
134 TIGR00883 2A0106 metabolite-pr 99.4 1.5E-11 3.2E-16 100.2 13.2 134 79-217 47-193 (394)
135 PRK09528 lacY galactoside perm 99.4 2.7E-11 5.8E-16 99.9 14.8 177 30-214 5-190 (420)
136 TIGR00805 oat sodium-independe 99.4 5.4E-12 1.2E-16 108.5 11.0 159 60-218 58-284 (633)
137 TIGR00892 2A0113 monocarboxyla 99.4 2E-11 4.3E-16 101.7 14.0 141 63-214 47-193 (455)
138 TIGR00895 2A0115 benzoate tran 99.4 3.8E-11 8.1E-16 98.0 15.4 118 61-188 276-396 (398)
139 PRK03699 putative transporter; 99.4 6.1E-11 1.3E-15 97.0 16.5 143 63-216 234-381 (394)
140 COG2814 AraJ Arabinose efflux 99.3 1.6E-10 3.5E-15 92.1 17.7 178 26-214 202-385 (394)
141 TIGR00894 2A0114euk Na(+)-depe 99.3 6.9E-11 1.5E-15 98.8 16.5 183 25-215 251-450 (465)
142 TIGR00712 glpT glycerol-3-phos 99.3 6.6E-11 1.4E-15 98.1 15.6 180 31-218 247-437 (438)
143 PRK10133 L-fucose transporter; 99.3 1.8E-10 3.9E-15 95.4 18.0 124 57-187 48-174 (438)
144 COG2223 NarK Nitrate/nitrite t 99.3 4.8E-11 1E-15 94.5 13.5 185 26-214 209-400 (417)
145 KOG2532 Permease of the major 99.3 5.9E-11 1.3E-15 97.9 14.4 131 76-214 82-215 (466)
146 TIGR00891 2A0112 putative sial 99.3 6.2E-11 1.3E-15 97.0 14.6 116 64-188 268-386 (405)
147 COG2270 Permeases of the major 99.3 4E-11 8.7E-16 95.0 12.6 145 64-218 282-432 (438)
148 KOG0254 Predicted transporter 99.3 3.9E-11 8.5E-16 101.4 13.3 138 71-219 93-234 (513)
149 PRK11462 putative transporter; 99.3 5.3E-10 1.2E-14 93.1 19.8 154 25-187 218-382 (460)
150 COG2223 NarK Nitrate/nitrite t 99.3 1.1E-10 2.3E-15 92.5 14.5 142 63-213 42-191 (417)
151 TIGR00710 efflux_Bcr_CflA drug 99.3 2.7E-10 5.9E-15 92.7 17.7 176 26-207 197-376 (385)
152 PF13347 MFS_2: MFS/sugar tran 99.3 1E-10 2.2E-15 96.8 14.9 157 23-187 213-379 (428)
153 PF01306 LacY_symp: LacY proto 99.3 2.5E-10 5.4E-15 91.9 16.5 181 27-218 212-404 (412)
154 PRK11902 ampG muropeptide tran 99.3 2.1E-10 4.4E-15 94.2 16.5 182 26-217 200-392 (402)
155 KOG2504 Monocarboxylate transp 99.3 8.1E-11 1.7E-15 98.3 13.6 177 29-215 292-476 (509)
156 TIGR00881 2A0104 phosphoglycer 99.3 1.5E-10 3.3E-15 93.7 14.3 155 27-188 208-368 (379)
157 PF00083 Sugar_tr: Sugar (and 99.3 1.7E-14 3.7E-19 119.9 -9.0 140 73-219 52-196 (451)
158 PF07690 MFS_1: Major Facilita 99.3 3.3E-11 7.2E-16 96.7 9.9 149 28-183 199-352 (352)
159 PRK10133 L-fucose transporter; 99.3 1.1E-09 2.5E-14 90.6 18.6 150 26-188 249-403 (438)
160 TIGR02332 HpaX 4-hydroxyphenyl 99.3 3.2E-10 6.9E-15 93.3 15.3 105 74-188 286-391 (412)
161 TIGR01301 GPH_sucrose GPH fami 99.3 4.1E-10 8.8E-15 93.2 15.7 160 59-218 28-222 (477)
162 PF05977 MFS_3: Transmembrane 99.3 4.2E-10 9.1E-15 94.5 15.9 176 27-212 210-391 (524)
163 PRK11102 bicyclomycin/multidru 99.2 1E-09 2.2E-14 89.2 17.5 155 27-188 186-345 (377)
164 PRK08633 2-acyl-glycerophospho 99.2 2.4E-10 5.2E-15 105.5 15.5 152 27-188 224-380 (1146)
165 TIGR00882 2A0105 oligosacchari 99.2 2.6E-10 5.7E-15 93.3 13.9 173 35-214 2-182 (396)
166 KOG2533 Permease of the major 99.2 7.8E-10 1.7E-14 91.7 16.5 140 70-219 84-232 (495)
167 PRK15011 sugar efflux transpor 99.2 1.2E-09 2.6E-14 89.4 17.4 170 38-218 18-198 (393)
168 TIGR01272 gluP glucose/galacto 99.2 2.4E-09 5.2E-14 84.6 18.3 121 65-198 173-298 (310)
169 TIGR00901 2A0125 AmpG-related 99.2 1.5E-10 3.3E-15 93.3 11.5 117 60-176 234-355 (356)
170 PRK11043 putative transporter; 99.2 1.9E-09 4E-14 88.5 17.9 158 25-188 193-353 (401)
171 TIGR00711 efflux_EmrB drug res 99.2 8E-10 1.7E-14 92.8 15.6 152 30-187 250-405 (485)
172 PRK11195 lysophospholipid tran 99.2 8.3E-10 1.8E-14 90.3 14.8 173 28-211 198-376 (393)
173 PRK15402 multidrug efflux syst 99.2 2.6E-09 5.7E-14 87.8 17.6 157 26-188 206-366 (406)
174 TIGR00896 CynX cyanate transpo 99.2 1.5E-09 3.3E-14 87.5 15.8 151 27-188 189-344 (355)
175 PRK11646 multidrug resistance 99.2 2.4E-09 5.2E-14 87.8 16.9 153 26-188 199-355 (400)
176 TIGR00896 CynX cyanate transpo 99.2 8.4E-10 1.8E-14 89.0 13.9 115 61-187 26-143 (355)
177 TIGR00885 fucP L-fucose:H+ sym 99.2 5.8E-09 1.3E-13 85.7 18.1 98 78-188 280-377 (410)
178 PRK11652 emrD multidrug resist 99.2 5.3E-09 1.2E-13 85.6 17.8 156 25-188 197-356 (394)
179 COG3104 PTR2 Dipeptide/tripept 99.2 1.8E-10 3.9E-15 93.3 8.6 168 40-215 22-206 (498)
180 PRK11128 putative 3-phenylprop 99.1 2E-09 4.2E-14 87.8 14.8 155 49-217 18-181 (382)
181 PRK10054 putative transporter; 99.1 1.9E-09 4E-14 88.3 14.6 100 79-188 256-355 (395)
182 TIGR00902 2A0127 phenyl propri 99.1 3.3E-09 7.1E-14 86.5 15.9 142 51-203 20-167 (382)
183 PRK10213 nepI ribonucleoside t 99.1 1.2E-08 2.6E-13 83.5 18.7 167 27-204 208-380 (394)
184 PRK14995 methyl viologen resis 99.1 3.2E-09 6.9E-14 89.5 15.7 152 29-187 253-408 (495)
185 KOG4686 Predicted sugar transp 99.1 1.3E-09 2.8E-14 82.3 11.7 137 40-188 268-410 (459)
186 PRK10091 MFS transport protein 99.1 1.1E-08 2.3E-13 83.5 17.5 139 62-211 227-372 (382)
187 KOG0252 Inorganic phosphate tr 99.1 1E-10 2.2E-15 93.5 4.7 104 70-176 87-190 (538)
188 PRK10473 multidrug efflux syst 99.1 1.6E-08 3.4E-13 82.7 17.2 91 27-117 195-289 (392)
189 KOG2504 Monocarboxylate transp 99.0 2.7E-09 5.9E-14 89.3 10.2 129 75-214 89-220 (509)
190 KOG2532 Permease of the major 99.0 6.4E-09 1.4E-13 86.1 11.5 182 24-214 247-446 (466)
191 TIGR00886 2A0108 nitrite extru 99.0 5.3E-09 1.1E-13 84.6 10.9 145 27-179 217-366 (366)
192 KOG2533 Permease of the major 99.0 4.7E-09 1E-13 87.2 9.9 155 24-187 262-425 (495)
193 TIGR00889 2A0110 nucleoside tr 99.0 2.1E-08 4.6E-13 82.7 13.8 140 63-218 31-183 (418)
194 PRK06814 acylglycerophosphoeth 99.0 2.7E-08 5.7E-13 92.1 15.7 162 27-188 217-392 (1140)
195 TIGR01301 GPH_sucrose GPH fami 99.0 1.1E-07 2.4E-12 78.9 17.6 145 74-218 312-475 (477)
196 TIGR00792 gph sugar (Glycoside 98.9 2.6E-08 5.7E-13 82.6 13.3 156 59-218 24-198 (437)
197 KOG2325 Predicted transporter/ 98.9 3.3E-08 7.2E-13 81.0 13.3 175 38-218 33-233 (488)
198 TIGR00788 fbt folate/biopterin 98.9 2.7E-08 5.8E-13 83.2 13.2 124 64-187 282-408 (468)
199 PF06813 Nodulin-like: Nodulin 98.9 2.6E-08 5.7E-13 75.3 11.7 129 54-187 17-152 (250)
200 KOG3762 Predicted transporter 98.9 3E-09 6.6E-14 86.8 6.3 172 31-212 367-544 (618)
201 KOG0253 Synaptic vesicle trans 98.9 3E-08 6.5E-13 77.7 11.3 132 77-220 123-256 (528)
202 COG0738 FucP Fucose permease [ 98.9 1.4E-07 3.1E-12 74.8 14.9 148 27-188 228-380 (422)
203 COG0738 FucP Fucose permease [ 98.8 2.4E-07 5.2E-12 73.5 14.4 108 73-187 54-161 (422)
204 TIGR02718 sider_RhtX_FptX side 98.8 3.4E-07 7.5E-12 74.9 15.6 168 43-216 5-185 (390)
205 KOG2816 Predicted transporter 98.8 6.7E-08 1.4E-12 79.8 10.7 134 76-222 71-207 (463)
206 PRK10207 dipeptide/tripeptide 98.7 2.6E-07 5.7E-12 77.6 13.2 114 74-187 316-436 (489)
207 PF03825 Nuc_H_symport: Nucleo 98.7 5.1E-07 1.1E-11 73.8 14.4 159 48-218 15-183 (400)
208 TIGR00788 fbt folate/biopterin 98.7 3.4E-07 7.5E-12 76.6 13.4 169 41-218 28-212 (468)
209 PRK15403 multidrug efflux syst 98.7 4.9E-06 1.1E-10 68.7 18.7 173 26-206 209-388 (413)
210 PF06609 TRI12: Fungal trichot 98.7 1.7E-06 3.8E-11 73.3 16.0 105 74-186 356-461 (599)
211 PF05631 DUF791: Protein of un 98.7 1.1E-05 2.3E-10 63.7 18.7 147 63-220 62-222 (354)
212 PRK09669 putative symporter Ya 98.6 5.6E-07 1.2E-11 75.0 11.4 126 56-185 31-165 (444)
213 COG2807 CynX Cyanate permease 98.6 5.4E-06 1.2E-10 65.2 15.4 166 28-208 201-378 (395)
214 PRK10429 melibiose:sodium symp 98.6 1.5E-06 3.3E-11 73.0 13.5 121 60-184 32-161 (473)
215 PF01306 LacY_symp: LacY proto 98.6 3.1E-07 6.7E-12 74.3 8.7 170 33-210 5-183 (412)
216 PF03209 PUCC: PUCC protein; 98.5 6.8E-05 1.5E-09 60.3 18.5 152 25-187 198-358 (403)
217 PTZ00207 hypothetical protein; 98.4 5E-06 1.1E-10 70.8 12.8 177 27-214 345-551 (591)
218 PRK11462 putative transporter; 98.4 1.3E-05 2.8E-10 67.1 15.2 127 56-186 31-166 (460)
219 KOG2563 Permease of the major 98.4 3.4E-05 7.3E-10 62.5 15.5 110 71-184 83-194 (480)
220 PF11700 ATG22: Vacuole efflux 98.4 4.4E-05 9.4E-10 63.9 17.0 138 74-219 77-252 (477)
221 KOG2563 Permease of the major 98.4 3.7E-06 8E-11 67.9 10.1 188 24-217 255-452 (480)
222 TIGR00769 AAA ADP/ATP carrier 98.4 8.7E-05 1.9E-09 61.7 18.2 151 38-188 6-187 (472)
223 TIGR00924 yjdL_sub1_fam amino 98.4 4.3E-05 9.4E-10 64.3 16.6 141 70-211 315-464 (475)
224 PF13347 MFS_2: MFS/sugar tran 98.3 1.4E-06 3E-11 72.2 6.5 129 56-186 23-160 (428)
225 TIGR00926 2A1704 Peptide:H+ sy 98.3 2.8E-05 6.2E-10 67.4 13.6 130 80-211 36-178 (654)
226 PRK09584 tppB putative tripept 98.3 3.7E-05 8.1E-10 65.1 14.1 114 73-187 322-439 (500)
227 KOG3764 Vesicular amine transp 98.3 2.6E-06 5.7E-11 67.6 6.5 181 22-212 257-451 (464)
228 COG2211 MelB Na+/melibiose sym 98.2 9.4E-05 2E-09 61.0 14.7 125 56-184 34-167 (467)
229 KOG1330 Sugar transporter/spin 98.2 1.4E-05 3E-10 64.8 9.0 106 74-187 290-407 (493)
230 PF03092 BT1: BT1 family; Int 98.2 7.4E-05 1.6E-09 62.0 13.4 148 62-216 17-177 (433)
231 PF05978 UNC-93: Ion channel r 98.1 0.00012 2.7E-09 51.4 12.0 106 71-187 41-146 (156)
232 PF03209 PUCC: PUCC protein; 98.1 0.00011 2.4E-09 59.0 12.7 123 65-187 10-146 (403)
233 PF03092 BT1: BT1 family; Int 98.0 0.00014 3E-09 60.4 11.4 144 75-219 263-417 (433)
234 PF12832 MFS_1_like: MFS_1 lik 97.9 8.9E-05 1.9E-09 45.4 7.5 57 50-106 15-74 (77)
235 COG2807 CynX Cyanate permease 97.9 0.0005 1.1E-08 54.5 13.3 138 62-211 39-182 (395)
236 PRK09848 glucuronide transport 97.9 0.00053 1.2E-08 57.3 14.2 123 62-187 36-172 (448)
237 KOG3098 Uncharacterized conser 97.9 0.0011 2.3E-08 54.9 14.8 113 73-186 285-408 (461)
238 PF06963 FPN1: Ferroportin1 (F 97.8 0.0014 2.9E-08 54.1 14.2 124 61-184 284-410 (432)
239 COG0477 ProP Permeases of the 97.7 0.00074 1.6E-08 52.6 11.7 105 75-187 47-153 (338)
240 PF03219 TLC: TLC ATP/ADP tran 97.7 0.0079 1.7E-07 50.6 17.8 150 38-187 23-201 (491)
241 KOG2615 Permease of the major 97.7 0.002 4.4E-08 51.5 12.8 116 63-188 290-410 (451)
242 COG3202 ATP/ADP translocase [E 97.7 0.0072 1.6E-07 50.0 16.0 150 38-187 26-205 (509)
243 TIGR01272 gluP glucose/galacto 97.6 0.00024 5.1E-09 56.4 7.6 59 129-187 9-67 (310)
244 PF01770 Folate_carrier: Reduc 97.6 0.0019 4.1E-08 52.6 12.5 128 79-217 53-184 (412)
245 KOG2816 Predicted transporter 97.6 0.0082 1.8E-07 50.2 16.4 114 63-187 270-387 (463)
246 PRK15462 dipeptide/tripeptide 97.5 0.022 4.7E-07 48.2 17.4 119 68-187 309-435 (493)
247 PF07672 MFS_Mycoplasma: Mycop 97.3 0.0033 7E-08 47.6 9.5 48 131-178 205-254 (267)
248 COG2270 Permeases of the major 97.3 0.013 2.7E-07 47.7 12.9 102 74-182 65-167 (438)
249 PF03137 OATP: Organic Anion T 97.3 4.1E-05 8.9E-10 65.1 -1.3 159 60-218 28-253 (539)
250 TIGR00939 2a57 Equilibrative N 97.2 0.051 1.1E-06 45.3 16.2 58 129-186 371-428 (437)
251 TIGR00805 oat sodium-independe 97.1 0.012 2.6E-07 51.5 12.7 85 27-111 322-413 (633)
252 PF02487 CLN3: CLN3 protein; 97.1 0.038 8.3E-07 45.1 14.3 60 128-187 333-392 (402)
253 PF00854 PTR2: POT family; In 97.0 0.0077 1.7E-07 49.1 9.9 113 98-211 2-119 (372)
254 COG3104 PTR2 Dipeptide/tripept 97.0 0.16 3.5E-06 42.4 16.9 121 67-187 324-451 (498)
255 PF03137 OATP: Organic Anion T 96.9 0.00021 4.5E-09 60.9 0.0 162 27-188 297-510 (539)
256 KOG3098 Uncharacterized conser 96.7 0.028 6.1E-07 46.7 10.6 105 71-186 54-158 (461)
257 KOG3626 Organic anion transpor 96.6 0.0067 1.4E-07 52.9 6.8 144 78-221 143-349 (735)
258 KOG0637 Sucrose transporter an 96.6 0.0043 9.3E-08 50.8 5.2 148 60-207 57-220 (498)
259 KOG3574 Acetyl-CoA transporter 96.5 0.18 3.9E-06 40.9 13.0 79 38-117 30-119 (510)
260 KOG3626 Organic anion transpor 96.2 0.054 1.2E-06 47.5 9.8 55 134-188 590-645 (735)
261 PF13000 Acatn: Acetyl-coenzym 96.1 0.15 3.2E-06 42.8 11.1 47 138-184 413-459 (544)
262 PF02487 CLN3: CLN3 protein; 95.8 0.064 1.4E-06 43.9 8.0 73 78-161 70-142 (402)
263 PRK03612 spermidine synthase; 95.6 1.3 2.7E-05 38.2 15.9 48 139-187 119-166 (521)
264 TIGR00806 rfc RFC reduced fola 95.3 0.2 4.3E-06 42.1 9.2 97 75-181 306-404 (511)
265 PF01770 Folate_carrier: Reduc 94.9 0.95 2.1E-05 37.4 12.0 91 75-175 293-385 (412)
266 PF06779 DUF1228: Protein of u 94.5 0.26 5.7E-06 30.6 6.3 58 60-117 17-77 (85)
267 PF06963 FPN1: Ferroportin1 (F 94.4 1.7 3.7E-05 36.3 12.6 35 72-106 43-77 (432)
268 KOG4332 Predicted sugar transp 94.3 0.86 1.9E-05 35.4 9.7 61 80-151 85-145 (454)
269 KOG3574 Acetyl-CoA transporter 94.2 0.62 1.3E-05 38.0 9.1 159 27-186 257-425 (510)
270 KOG1479 Nucleoside transporter 94.2 1 2.3E-05 36.9 10.7 32 131-163 118-149 (406)
271 KOG4686 Predicted sugar transp 93.8 0.0043 9.4E-08 47.8 -3.2 99 75-180 87-186 (459)
272 PF03219 TLC: TLC ATP/ADP tran 93.8 2.8 6.2E-05 35.7 12.8 86 25-110 270-362 (491)
273 KOG1479 Nucleoside transporter 93.7 0.57 1.2E-05 38.4 8.4 57 129-185 342-398 (406)
274 KOG3762 Predicted transporter 93.7 0.078 1.7E-06 44.7 3.5 63 58-120 34-100 (618)
275 KOG3810 Micronutrient transpor 93.4 1.7 3.6E-05 35.1 10.2 94 75-178 279-374 (433)
276 PF01733 Nucleoside_tran: Nucl 93.2 0.03 6.4E-07 44.5 0.4 112 74-185 189-303 (309)
277 PF13000 Acatn: Acetyl-coenzym 92.4 1.5 3.3E-05 37.0 9.1 31 85-115 53-89 (544)
278 KOG1237 H+/oligopeptide sympor 92.4 6.7 0.00015 34.2 13.3 133 79-211 85-241 (571)
279 TIGR00939 2a57 Equilibrative N 92.3 4.7 0.0001 33.9 12.1 83 78-163 56-138 (437)
280 KOG2325 Predicted transporter/ 91.3 0.36 7.9E-06 40.6 4.5 57 149-205 407-465 (488)
281 KOG4332 Predicted sugar transp 89.9 8 0.00017 30.3 13.9 168 41-211 251-427 (454)
282 TIGR00769 AAA ADP/ATP carrier 89.5 12 0.00026 31.8 17.0 85 25-109 254-345 (472)
283 PF11947 DUF3464: Protein of u 88.2 3.1 6.7E-05 29.1 6.4 37 144-180 108-144 (153)
284 PF02990 EMP70: Endomembrane p 86.9 13 0.00027 32.2 10.8 23 74-96 304-326 (521)
285 KOG3810 Micronutrient transpor 86.7 2 4.4E-05 34.6 5.4 123 85-218 60-186 (433)
286 COG5336 Uncharacterized protei 85.8 3.4 7.3E-05 26.8 5.1 30 79-108 54-84 (116)
287 PF12670 DUF3792: Protein of u 79.5 16 0.00034 24.4 9.5 32 74-105 41-72 (116)
288 PF03547 Mem_trans: Membrane t 78.9 11 0.00023 31.1 7.1 18 78-95 6-23 (385)
289 COG3202 ATP/ADP translocase [E 77.5 45 0.00098 28.5 12.9 41 73-113 327-368 (509)
290 KOG3097 Predicted membrane pro 76.7 27 0.00059 28.3 8.2 69 79-158 70-138 (390)
291 COG1230 CzcD Co/Zn/Cd efflux s 73.8 43 0.00093 26.5 14.6 36 79-114 62-104 (296)
292 KOG1278 Endosomal membrane pro 72.1 16 0.00035 31.4 6.3 11 26-36 315-325 (628)
293 KOG3880 Predicted small molecu 71.7 2.4 5.2E-05 33.7 1.5 71 79-162 74-146 (409)
294 PRK10263 DNA translocase FtsK; 64.2 1.1E+02 0.0023 30.0 10.3 18 78-95 63-80 (1355)
295 PF06781 UPF0233: Uncharacteri 64.1 33 0.00072 21.5 6.1 12 34-45 29-40 (87)
296 TIGR01667 YCCS_YHJK integral m 62.0 1.3E+02 0.0027 27.4 11.1 33 85-117 41-77 (701)
297 KOG0637 Sucrose transporter an 61.3 72 0.0016 27.2 8.0 26 75-100 340-365 (498)
298 PF09605 Trep_Strep: Hypotheti 60.8 63 0.0014 23.6 9.2 42 73-114 34-75 (186)
299 KOG2601 Iron transporter [Inor 60.6 20 0.00044 29.6 4.7 38 148-185 404-441 (503)
300 TIGR01666 YCCS hypothetical me 60.3 1.4E+02 0.0029 27.3 11.4 49 85-142 41-93 (704)
301 PF01733 Nucleoside_tran: Nucl 57.5 3.4 7.5E-05 32.8 0.0 20 143-163 10-29 (309)
302 COG2119 Predicted membrane pro 53.8 84 0.0018 22.9 6.3 36 77-112 144-179 (190)
303 TIGR00986 3a0801s05tom22 mitoc 48.7 43 0.00093 23.2 4.1 22 155-176 58-79 (145)
304 PF13536 EmrE: Multidrug resis 48.6 74 0.0016 20.7 7.3 18 92-109 84-101 (113)
305 PF07857 DUF1632: CEO family ( 48.0 36 0.00078 26.3 4.1 23 162-184 75-97 (254)
306 TIGR00926 2A1704 Peptide:H+ sy 46.7 1.6E+02 0.0035 26.6 8.4 51 157-207 592-643 (654)
307 PF04281 Tom22: Mitochondrial 46.4 97 0.0021 21.4 5.6 23 155-177 60-82 (137)
308 PF11023 DUF2614: Protein of u 45.8 86 0.0019 20.7 5.9 13 92-104 6-18 (114)
309 COG1268 BioY Uncharacterized c 44.6 88 0.0019 22.9 5.4 19 78-96 93-111 (184)
310 COG2962 RarD Predicted permeas 42.8 1.7E+02 0.0037 23.2 12.3 24 89-112 119-142 (293)
311 COG4708 Predicted membrane pro 42.3 45 0.00099 23.1 3.4 26 73-98 140-165 (169)
312 KOG3880 Predicted small molecu 42.2 1.2E+02 0.0025 24.7 6.0 59 128-186 340-398 (409)
313 TIGR02230 ATPase_gene1 F0F1-AT 41.7 96 0.0021 20.1 6.7 28 81-108 57-84 (100)
314 PF09788 Tmemb_55A: Transmembr 41.6 60 0.0013 24.9 4.3 19 93-111 192-210 (256)
315 KOG1277 Endosomal membrane pro 41.5 2.3E+02 0.0049 24.3 7.8 24 75-98 335-359 (593)
316 PRK02935 hypothetical protein; 41.4 99 0.0021 20.1 6.2 15 91-105 6-20 (110)
317 PF09930 DUF2162: Predicted tr 40.7 97 0.0021 23.5 5.3 44 62-105 123-166 (224)
318 KOG1484 Putative Zn2+ transpor 40.4 2E+02 0.0043 23.4 8.6 89 27-116 24-119 (354)
319 PF06123 CreD: Inner membrane 39.9 2.3E+02 0.0051 24.0 9.8 25 76-100 300-324 (430)
320 KOG2765 Predicted membrane pro 39.5 1.3E+02 0.0028 24.9 6.0 23 35-57 156-178 (416)
321 PF05631 DUF791: Protein of un 38.9 2.2E+02 0.0048 23.4 9.7 63 27-93 236-304 (354)
322 PF11299 DUF3100: Protein of u 36.8 46 0.001 25.2 3.1 44 140-184 181-224 (241)
323 PF05297 Herpes_LMP1: Herpesvi 35.0 13 0.00028 28.9 0.0 17 202-218 173-189 (381)
324 PF08566 Pam17: Mitochondrial 34.8 1.8E+02 0.0038 21.1 6.7 16 25-40 24-39 (173)
325 TIGR00267 conserved hypothetic 34.5 1.7E+02 0.0037 21.0 5.6 19 80-98 126-144 (169)
326 TIGR02840 spore_YtaF putative 34.4 2E+02 0.0042 21.5 6.9 28 66-93 153-180 (206)
327 PF02694 UPF0060: Uncharacteri 34.3 1.4E+02 0.0029 19.6 4.9 42 73-114 60-101 (107)
328 PF00672 HAMP: HAMP domain; I 34.2 45 0.00098 19.2 2.4 25 204-228 9-33 (70)
329 PF13493 DUF4118: Domain of un 33.6 60 0.0013 20.8 3.0 22 76-97 84-105 (105)
330 PRK02237 hypothetical protein; 33.4 1.4E+02 0.0031 19.6 4.6 41 74-114 63-103 (109)
331 KOG3500 Vacuolar H+-ATPase V0 33.3 1.2E+02 0.0026 18.7 4.0 39 77-115 11-49 (84)
332 PF07698 7TM-7TMR_HD: 7TM rece 33.1 1.9E+02 0.0042 21.0 7.3 31 79-109 109-139 (194)
333 PF08611 DUF1774: Fungal prote 32.8 1.2E+02 0.0027 19.4 4.1 17 193-209 52-68 (97)
334 PRK11715 inner membrane protei 32.3 3.2E+02 0.0069 23.3 9.5 25 76-100 306-330 (436)
335 PF01925 TauE: Sulfite exporte 31.8 2.2E+02 0.0048 21.4 8.6 22 77-98 203-224 (240)
336 COG1079 Uncharacterized ABC-ty 30.9 2.8E+02 0.0061 22.2 12.3 90 81-187 21-115 (304)
337 PF06027 DUF914: Eukaryotic pr 30.5 3E+02 0.0065 22.4 12.7 205 31-241 126-333 (334)
338 PF03605 DcuA_DcuB: Anaerobic 30.1 3.2E+02 0.0069 22.6 7.6 11 2-12 188-198 (364)
339 PF04120 Iron_permease: Low af 29.9 1.9E+02 0.0041 19.9 5.4 26 195-220 41-66 (132)
340 PF04226 Transgly_assoc: Trans 28.7 1.1E+02 0.0023 16.7 4.1 17 80-96 4-20 (48)
341 PF02632 BioY: BioY family; I 28.7 2.1E+02 0.0045 20.0 5.2 20 78-97 64-83 (148)
342 PF06898 YqfD: Putative stage 28.6 69 0.0015 26.6 3.2 31 86-116 76-106 (385)
343 PF11947 DUF3464: Protein of u 28.2 1.6E+02 0.0035 20.8 4.4 25 28-53 53-77 (153)
344 TIGR02876 spore_yqfD sporulati 27.7 70 0.0015 26.5 3.1 31 87-117 74-104 (382)
345 PF11298 DUF3099: Protein of u 26.8 1.5E+02 0.0033 17.9 4.4 27 91-117 11-37 (73)
346 PRK10711 hypothetical protein; 26.4 2.7E+02 0.0059 21.3 5.7 18 80-97 126-143 (231)
347 KOG2927 Membrane component of 25.8 1.2E+02 0.0025 24.7 3.8 9 158-166 209-217 (372)
348 COG5336 Uncharacterized protei 25.8 2E+02 0.0044 18.9 5.9 27 161-187 37-63 (116)
349 PF01528 Herpes_glycop: Herpes 25.5 4E+02 0.0086 22.2 8.9 17 145-161 249-265 (374)
350 PRK10255 PTS system N-acetyl g 25.0 3.8E+02 0.0083 24.2 7.1 40 78-117 99-151 (648)
351 PF01102 Glycophorin_A: Glycop 24.9 68 0.0015 21.6 2.1 9 211-219 85-93 (122)
352 COG4262 Predicted spermidine s 24.7 4.2E+02 0.009 22.2 11.9 29 129-157 104-132 (508)
353 PRK04288 antiholin-like protei 24.6 3.3E+02 0.0071 20.9 8.0 20 79-98 130-149 (232)
354 PF06570 DUF1129: Protein of u 24.2 3E+02 0.0066 20.4 11.2 14 23-36 43-56 (206)
355 COG3766 Predicted membrane pro 23.6 2.5E+02 0.0054 19.2 6.5 41 174-214 53-93 (133)
356 PF12911 OppC_N: N-terminal TM 23.4 1.2E+02 0.0027 16.6 2.8 24 91-114 9-32 (56)
357 TIGR02005 PTS-IIBC-alpha PTS s 23.3 5.1E+02 0.011 22.8 7.4 40 78-117 140-192 (524)
358 KOG3088 Secretory carrier memb 22.8 3.9E+02 0.0085 21.2 6.9 8 216-223 271-278 (313)
359 PF13940 Ldr_toxin: Toxin Ldr, 22.5 1.2E+02 0.0026 15.1 2.2 16 78-93 19-34 (35)
360 PF09788 Tmemb_55A: Transmembr 22.4 3.1E+02 0.0068 21.2 5.3 10 164-173 197-206 (256)
361 PF03116 NQR2_RnfD_RnfE: NQR2, 22.4 4.2E+02 0.0091 21.4 7.5 22 78-99 46-67 (313)
362 PF11283 DUF3084: Protein of u 22.2 1.8E+02 0.004 17.8 3.3 17 85-101 18-34 (79)
363 COG3105 Uncharacterized protei 21.4 2E+02 0.0042 19.6 3.6 19 79-97 13-31 (138)
364 PF04341 DUF485: Protein of un 21.4 2.2E+02 0.0049 17.9 4.3 10 26-35 5-14 (91)
365 PTZ00370 STEVOR; Provisional 21.0 1.3E+02 0.0029 23.6 3.2 23 197-219 261-283 (296)
366 COG1972 NupC Nucleoside permea 20.8 3E+02 0.0064 22.9 5.2 65 155-221 154-221 (404)
367 PF05814 DUF843: Baculovirus p 20.4 2.3E+02 0.005 17.6 5.3 24 81-104 7-30 (83)
No 1
>TIGR00898 2A0119 cation transport protein.
Probab=99.90 E-value=7.5e-22 Score=166.07 Aligned_cols=191 Identities=32% Similarity=0.554 Sum_probs=158.4
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAY 105 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~ 105 (255)
.+++++++++.+++.++..+..++...+.+|+...+.+..+.+......+.++..+++.++.++++||+|||+.+.++.+
T Consensus 314 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~ 393 (505)
T TIGR00898 314 YSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLL 393 (505)
T ss_pred CcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 57889999999888888888888888888998888888888888888788888999999999999999999999999988
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhH
Q 045196 106 VAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLL 185 (255)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~ 185 (255)
+++++++++.+.. ....+..+...++..++.+..++..+.+.+|.+|++.|+++.|+.+..+.+|++++|++
T Consensus 394 ~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i 465 (505)
T TIGR00898 394 LAGVALLLLLFVP--------VDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFL 465 (505)
T ss_pred HHHHHHHHHHHcC--------CCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHH
Confidence 8888877766652 12224444555556666666778889999999999999999999999999999999999
Q ss_pred HHhhhcCCCchhHHHHHHHHHHHHHHHHhccCCCCCchH
Q 045196 186 VVVGRMSPSLSFLVFGALSIFSGVLSLWLPETKNAPLYE 224 (255)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 224 (255)
.+....+...++.+++++.+++.++.+++|||++++++|
T Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~~ 504 (505)
T TIGR00898 466 VYLGEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLPE 504 (505)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCCC
Confidence 885555566788888888888887778889999887654
No 2
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=9.1e-23 Score=156.62 Aligned_cols=189 Identities=26% Similarity=0.382 Sum_probs=154.4
Q ss_pred CCccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeeccc---------------------------CchhHHHHHH
Q 045196 23 NSDNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNL---------------------------NFNLYFSVAL 75 (255)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~ 75 (255)
+...+..+++. |++||.++..+..++...+.||+.......+ ....+...++
T Consensus 311 e~rg~~~nLls-p~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdlli 389 (528)
T KOG0253|consen 311 EVRGGTTNLLS-PKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLI 389 (528)
T ss_pred ccccchHhhcC-hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHH
Confidence 34456677774 5679999999999999999999865322110 0123556678
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhh
Q 045196 76 NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYC 155 (255)
Q Consensus 76 ~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
.++..++|.++.++++||+|||+.+..+.++++++.+++.... ......++.+.+.++.++.+.+.|+|.
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~----------~rn~~tvllf~arafisg~fqvaYvYt 459 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCK----------TRNAYTVLLFTARAFISGAFQVAYVYT 459 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc----------CcchhHHHHHHHHHHHhchheEEEEec
Confidence 8899999999999999999999999999999999998888773 444556667778888888899999999
Q ss_pred ccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhhhcCCCchhHHHHHHHHHHHHHHHHhc-cCCCCCc
Q 045196 156 VELFPTNVRNIAVSFLRQALMLGASVSPLLVVVGRMSPSLSFLVFGALSIFSGVLSLWLP-ETKNAPL 222 (255)
Q Consensus 156 ~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~~~~ 222 (255)
+|++|+..|+++.|.+...+++|+++.|++.-........+..+++++++++.+...++| ||+++.+
T Consensus 460 PEVyPTavRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 460 PEVYPTAVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred CcccchhhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 999999999999999999999999999999854444567788999999999988887776 8998864
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.87 E-value=5e-21 Score=164.54 Aligned_cols=140 Identities=19% Similarity=0.253 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 73 VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 73 ~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
.++.+++.+++.+++|+++||+|||++++++.++.+++++++.+. .+.+..+++.++.+++.++.++..+
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~----------~s~~~ll~~~~l~g~~~~~~~~~~~ 670 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG----------NSESAMIALLCLFGGLSIAAWNALD 670 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH----------ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344557888999999999999999999999999888888877765 2334444445555666667778899
Q ss_pred hhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH-hhhcCCCchhHHHHHHHHHHHHHHHHhccCCCCCc
Q 045196 153 IYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV-VGRMSPSLSFLVFGALSIFSGVLSLWLPETKNAPL 222 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (255)
++++|++|++.|++++|+.+..+++|++++|++.+ +...+...++++++++.++++++.+++|||+++.+
T Consensus 671 a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~~~~l 741 (742)
T TIGR01299 671 VLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTRGQVL 741 (742)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 99999999999999999999999999999999987 33344556788888888887777778899988653
No 4
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=3e-21 Score=156.87 Aligned_cols=205 Identities=18% Similarity=0.191 Sum_probs=147.1
Q ss_pred CCccchHHhhcChhHHHHHHHHHHHHHHHHH------HhhheeeeecccCchh---HHHHHHHHHHHHHHHHHHHHHHhh
Q 045196 23 NSDNKNESLWGTKWAAKRLIMVMTAGFGVGF------VYYGIQLNVGNLNFNL---YFSVALNALMEIPAVVIGTVLLSF 93 (255)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr 93 (255)
.++.+++++++++..|+...+.+...+++.+ .+|. ..++.+.|.+. .......++..++.++++.+++||
T Consensus 253 ~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Ys-t~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~ 331 (485)
T KOG0569|consen 253 KKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYS-TSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR 331 (485)
T ss_pred ccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3667899999999989888888777776632 2333 33445556543 445566778889999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHH---HHHHHHH-HHHHhhhhhhhhhhhccccchhcHHHHHH
Q 045196 94 TNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQ---LIIEGVG-FMAASTAFDVMYIYCVELFPTNVRNIAVS 169 (255)
Q Consensus 94 ~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 169 (255)
+|||++++.+..++.++.+++.......+. ...|.. ++..++. ..+..+..|+.|-+.+|++|++.|+.+++
T Consensus 332 ~gRRpLll~~~~~~~~~~~~~~~~~~l~~~----~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s 407 (485)
T KOG0569|consen 332 LGRRPLLLISLSLMAVALLLMSIALFLSNS----FGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQS 407 (485)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHH
Confidence 999999999999999888877654321110 112321 2222222 33445667999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhHHHh-hhcCCCchhHHHHHHHHHHHHHH-HHhccCCCCCchHhHHhhhhh
Q 045196 170 FLRQALMLGASVSPLLVVV-GRMSPSLSFLVFGALSIFSGVLS-LWLPETKNAPLYETLKQQGEE 232 (255)
Q Consensus 170 ~~~~~~~~g~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~ 232 (255)
+.....++..++..+.... ...-....|+++.+.+.+..+.. +.+||||+|+..|+.++.++.
T Consensus 408 ~~~~~~w~~~fiv~~~fp~l~~~~g~~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 408 VATAVNWLSNFIVGFAFPPLQNVIGPYVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9999999988876666552 22222367788888887776665 577999999998887776544
No 5
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.83 E-value=3.6e-19 Score=149.58 Aligned_cols=194 Identities=16% Similarity=0.165 Sum_probs=125.3
Q ss_pred cchHHhhcCh---hHHHHHHHHHHHHHHHHHHhhheeeeec----ccCchhH---------------HHHHHHHHHHHHH
Q 045196 26 NKNESLWGTK---WAAKRLIMVMTAGFGVGFVYYGIQLNVG----NLNFNLY---------------FSVALNALMEIPA 83 (255)
Q Consensus 26 ~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------------~~~~~~~~~~~~~ 83 (255)
.+++++++++ +.++.++.....++.+.+.+|+...+.+ ..|.+.. ....+..++.+++
T Consensus 272 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g 351 (502)
T TIGR00887 272 ASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPG 351 (502)
T ss_pred hhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578887642 2234444445556666667777654443 2333211 0122333466778
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhc
Q 045196 84 VVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNV 163 (255)
Q Consensus 84 ~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 163 (255)
.+++++++||+|||++++++..+++++++++..... ............+...++..+..+..+.+.+|++|++.
T Consensus 352 ~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~ 425 (502)
T TIGR00887 352 YWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYN------HLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY 425 (502)
T ss_pred HHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHH------hcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH
Confidence 899999999999999998888777776665554320 00111111112122222233455788899999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHhh-h-----------cCCCchhHHHHHHHHHHHHHHHHhccCCCCCchHh
Q 045196 164 RNIAVSFLRQALMLGASVSPLLVVVG-R-----------MSPSLSFLVFGALSIFSGVLSLWLPETKNAPLYET 225 (255)
Q Consensus 164 r~~~~~~~~~~~~~g~~~~p~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 225 (255)
|+++.|+.+.+++++++++|.+.+.. + .+....+++++++++++.+..+++|||++++++|.
T Consensus 426 R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~~leei 499 (502)
T TIGR00887 426 RSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGKSLEEL 499 (502)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCCCHHhh
Confidence 99999999999999999999988742 2 11234677788887777666677799999887654
No 6
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.74 E-value=1.2e-18 Score=137.68 Aligned_cols=195 Identities=15% Similarity=0.159 Sum_probs=141.5
Q ss_pred hHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecc----cCch----hH-------H-HHHHHHHHHHHHHHHHHHHH
Q 045196 28 NESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGN----LNFN----LY-------F-SVALNALMEIPAVVIGTVLL 91 (255)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~-------~-~~~~~~~~~~~~~~~~g~l~ 91 (255)
+...+..+ +-++++..+..||...+.+|...++... ++.. .. . ..++.....++|.++..+++
T Consensus 294 F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~i 372 (538)
T KOG0252|consen 294 FSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFI 372 (538)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEe
Confidence 33444433 3578899999999999999887654432 2221 11 1 12223345566888889999
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHH
Q 045196 92 SFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFL 171 (255)
Q Consensus 92 dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 171 (255)
|++|||++.+.+++++.+..+.+.... ++ ........+...+...++..+.......+.+|.||++.|+++.|++
T Consensus 373 d~iGRk~iq~~GF~~~~i~~~~~~~~y--~~---~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIs 447 (538)
T KOG0252|consen 373 DIIGRKYIQLMGFFIMTIFFFVIAGPY--NQ---LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGIS 447 (538)
T ss_pred ehhhhHHHHHhhHHHHHHHHHHHcCCc--cc---ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHH
Confidence 999999999999999988887776653 11 1122223333334444456677788999999999999999999999
Q ss_pred HHHHHHhhhhhhhHHHhhh-------cCCCchhHHHHHHHHHHHHHHHHhccCCCCCchHhHHh
Q 045196 172 RQALMLGASVSPLLVVVGR-------MSPSLSFLVFGALSIFSGVLSLWLPETKNAPLYETLKQ 228 (255)
Q Consensus 172 ~~~~~~g~~~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 228 (255)
...+.+|++++.+...... .+....+++++++++++.++.+++|||++++++++..+
T Consensus 448 AA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~leei~~e 511 (538)
T KOG0252|consen 448 AASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLEEISNE 511 (538)
T ss_pred HHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCHHHhcCh
Confidence 9999999999988776422 35566799999999999888899999999998877433
No 7
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.74 E-value=1.3e-16 Score=133.83 Aligned_cols=189 Identities=13% Similarity=0.059 Sum_probs=112.3
Q ss_pred ccchHHhhcChhHHHHHHHHHHHHHHHHHHhhhee----eee-cccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcch
Q 045196 25 DNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQ----LNV-GNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNR 96 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~gr 96 (255)
+.++++++++. ++.+...+...++....+|... .++ ..++.+.... .....++.+++.++.|+++||+||
T Consensus 238 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr 315 (490)
T PRK10642 238 KVSFKEIATKH--WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGR 315 (490)
T ss_pred cCCHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34577777642 3333333333333333333322 223 2345443322 233345677888999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHH
Q 045196 97 RLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALM 176 (255)
Q Consensus 97 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 176 (255)
|+.+..+.++..+..+.+.... ...+....++..++.+++.+...+....+.+|++|++.|+++.|+.+..+.
T Consensus 316 r~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~ 388 (490)
T PRK10642 316 RPFVILGSVALFVLAIPAFILI-------NSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISV 388 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHH
Confidence 9988877764443333222211 012233334444444444445556677888899999999999999887788
Q ss_pred HhhhhhhhHHHhh--h-cCCCchhHHHHHHHHHHHHHHHHhccCCCCCc
Q 045196 177 LGASVSPLLVVVG--R-MSPSLSFLVFGALSIFSGVLSLWLPETKNAPL 222 (255)
Q Consensus 177 ~g~~~~p~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 222 (255)
+++.++|.+.++. . .++..++++..+.++++.+..+++||++++..
T Consensus 389 ~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 389 LVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 8888899888742 2 22344555555666666666677799877654
No 8
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.71 E-value=3.5e-16 Score=134.97 Aligned_cols=150 Identities=15% Similarity=0.077 Sum_probs=112.7
Q ss_pred eeeecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHH
Q 045196 59 QLNVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLI 135 (255)
Q Consensus 59 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (255)
+.+...++.+.... .....++.+++.+++|+++||+|||+.++++.++.+++.++..+. .+.+.+++
T Consensus 191 p~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa----------~s~~~llv 260 (742)
T TIGR01299 191 PSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFV----------QGYGFFLF 260 (742)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH----------hhHHHHHH
Confidence 33334455544333 333456888999999999999999999999988888887777766 45677777
Q ss_pred HHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hh-------------cCCCchhHHH
Q 045196 136 IEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GR-------------MSPSLSFLVF 200 (255)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~-------------~~~~~~~~~~ 200 (255)
..++.+++.++..+...+++.|.+|.+.|+...++...+..+|.++++.+... .. .+|++.+++.
T Consensus 261 ~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~ 340 (742)
T TIGR01299 261 CRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVC 340 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHH
Confidence 88888888888889999999999999999999999999998988888775531 11 1344555555
Q ss_pred HHHHHHHHHHHHHhccCC
Q 045196 201 GALSIFSGVLSLWLPETK 218 (255)
Q Consensus 201 ~~~~~~~~~~~~~~~e~~ 218 (255)
++.++++.++.+++||+.
T Consensus 341 ~lp~ll~ll~~~~lPESP 358 (742)
T TIGR01299 341 AFPCVFAIGALTFMPESP 358 (742)
T ss_pred HHHHHHHHHHHHHcCCCH
Confidence 555555555567789874
No 9
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.70 E-value=2.9e-15 Score=126.66 Aligned_cols=199 Identities=34% Similarity=0.517 Sum_probs=161.7
Q ss_pred CccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 045196 24 SDNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSVALNALMEIPAVVIGTVLLSFTNRRLLLSRS 103 (255)
Q Consensus 24 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~ 103 (255)
++..+.++++.++.++.++...+.++.....+|+.......+|.+.+....+.+....++....+...|+.|||.....+
T Consensus 307 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~ 386 (521)
T KOG0255|consen 307 PKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLS 386 (521)
T ss_pred CCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHH
Confidence 33568899999988999999999999999999999999999999999998888888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCc-hHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhh
Q 045196 104 AYVAGSASILCTLFSNNNNNKGKGGGS-WPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVS 182 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 182 (255)
.++..++++...+... ... +...+...++.++.+..+...+.+..|++|+..|..+.+.....+.++++++
T Consensus 387 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~a 458 (521)
T KOG0255|consen 387 LFLAGIGLLLFGWLPD--------DLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILA 458 (521)
T ss_pred HHHHHHHHHHHHHhhc--------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888741 122 3455566666666777777789999999999999999999999999999999
Q ss_pred hhHHHhhhc-CCCchhHHHHHHHHHHHHHH-HHhccCCCCCchHhHHhhh
Q 045196 183 PLLVVVGRM-SPSLSFLVFGALSIFSGVLS-LWLPETKNAPLYETLKQQG 230 (255)
Q Consensus 183 p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~ 230 (255)
|.+...... .....+.+++....+..++. +++|||+++.+.+..++.+
T Consensus 459 p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 459 PLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 998864332 23333344466666665555 7889999999877665544
No 10
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.69 E-value=8.3e-20 Score=151.63 Aligned_cols=201 Identities=19% Similarity=0.216 Sum_probs=129.7
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHh-----hheeeeecccCchhH-HHHHHHHHHHHHHHHHHHHHHhhcchhHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVY-----YGIQLNVGNLNFNLY-FSVALNALMEIPAVVIGTVLLSFTNRRLL 99 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 99 (255)
.+++++++++..++++...+.....+.... +..+......+.+.. ....+.++..+++.+++.+++||+|||++
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~ 318 (451)
T PF00083_consen 239 ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKL 318 (451)
T ss_pred eeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 568888888665556665555555442222 222333444444433 34445556777788888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHH-HHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHh
Q 045196 100 LSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVG-FMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLG 178 (255)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g 178 (255)
++++..+++++.+.+........+. +.......+++..+. ..+..+..+..+.+.+|++|++.|+++.++....++++
T Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~ 397 (451)
T PF00083_consen 319 LIIGLLLMAICSLILGIIFFLGVSS-SSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIG 397 (451)
T ss_pred ccccccccccccccccccccccccc-ccccccccceeeeecccccccccccccccccccccccccccccccccccccccc
Confidence 9999888887777664110000000 000112222222222 22333556788899999999999999999999999999
Q ss_pred hhhhhhHHHhh--hcCCCchhHHHHHHHHHHHHHH-HHhccCCCCCchHhHH
Q 045196 179 ASVSPLLVVVG--RMSPSLSFLVFGALSIFSGVLS-LWLPETKNAPLYETLK 227 (255)
Q Consensus 179 ~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~ 227 (255)
++++|.+.... ..+....+.+++++++++.++. +++|||++++++|.++
T Consensus 398 ~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 398 GFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQE 449 (451)
T ss_pred ccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHh
Confidence 99888876532 2233556777777777666554 5789999999988754
No 11
>PRK09952 shikimate transporter; Provisional
Probab=99.68 E-value=4.5e-15 Score=122.82 Aligned_cols=138 Identities=13% Similarity=0.068 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhh
Q 045196 75 LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIY 154 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
+.++..+++.++.|+++||+|||+.+..+.++..++.+....... .....+..+...++.+++.+...+..+++
T Consensus 294 ~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 367 (438)
T PRK09952 294 LVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE------AQSIFWIVFFSIMLANIAHDMVVCVQQPM 367 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH------cCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566778889999999999999888776655544433322210 01122333333444455555566788999
Q ss_pred hccccchhcHHHHHHHHHHHHH-HhhhhhhhHHHhh-h-c--CCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 155 CVELFPTNVRNIAVSFLRQALM-LGASVSPLLVVVG-R-M--SPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 155 ~~e~~p~~~r~~~~~~~~~~~~-~g~~~~p~~~~~~-~-~--~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
++|.+|++.|+++.++.+..+. +++.++|.+.++. + . ++..++.+.+++.+++.+..+.++|++
T Consensus 368 ~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 368 FTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccccc
Confidence 9999999999999999877765 8889999988842 2 2 234455666666666666666667643
No 12
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.68 E-value=2.3e-15 Score=126.63 Aligned_cols=143 Identities=8% Similarity=-0.027 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 73 VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 73 ~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
.....++.+++.++.|+++||+|||+.+.++.++..++.++...... ..+..+.+.+++..++.+++.++..+...
T Consensus 62 ~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 137 (502)
T TIGR00887 62 NGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPG----SSPKSVMATLCFWRFWLGVGIGGDYPLSA 137 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccC----cccchHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 34455678899999999999999999999988888887776665420 00001135677788888888888889999
Q ss_pred hhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhh-------------------------hcCCCchhHHHHHHHHHH
Q 045196 153 IYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVVG-------------------------RMSPSLSFLVFGALSIFS 207 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~-------------------------~~~~~~~~~~~~~~~~~~ 207 (255)
.++.|.+|++.|+++.++.+....+|.++++.+.... ..+|+..+.+.++..++.
T Consensus 138 ~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~ 217 (502)
T TIGR00887 138 IITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA 217 (502)
T ss_pred HHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888888777665411 124666676666666666
Q ss_pred HHHHHHhccCCC
Q 045196 208 GVLSLWLPETKN 219 (255)
Q Consensus 208 ~~~~~~~~e~~~ 219 (255)
.++.+++||+.+
T Consensus 218 ~~~~~~lpESpr 229 (502)
T TIGR00887 218 LYFRLTIPETPR 229 (502)
T ss_pred HHHHHhCCCCHH
Confidence 566677899854
No 13
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.67 E-value=3.9e-15 Score=122.33 Aligned_cols=187 Identities=14% Similarity=0.008 Sum_probs=118.8
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchh-----------HHHHHHHHHHHHHHHHHHHHHHhhcc
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNL-----------YFSVALNALMEIPAVVIGTVLLSFTN 95 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~g~l~dr~g 95 (255)
+.++++|+|.++..++..++........+...+.+..+.+.+. .....+..+..+++.++.++++||+|
T Consensus 200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g 279 (418)
T TIGR00889 200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFG 279 (418)
T ss_pred hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3456788887655444444443333222211222333333221 22233444577788899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC-CchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHH-H
Q 045196 96 RRLLLSRSAYVAGSASILCTLFSNNNNNKGKGG-GSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLR-Q 173 (255)
Q Consensus 96 rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~ 173 (255)
||+++.++.++.++...++.... ... ..+..++..++.+++.+...+....++.|.+|++.|+++.|+.+ .
T Consensus 280 ~r~~l~~~~~~~~v~~~l~~~~~-------~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~ 352 (418)
T TIGR00889 280 IKKVMLLSLVAWALRFGFFAYGD-------PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLM 352 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcC-------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 99999999888777665554431 001 12333444555555555666777888999999999999999997 5
Q ss_pred HHHHhhhhhhhHHHh--hh------cCCCchhHHHHHHHHHHHHHH-HHhccCCCC
Q 045196 174 ALMLGASVSPLLVVV--GR------MSPSLSFLVFGALSIFSGVLS-LWLPETKNA 220 (255)
Q Consensus 174 ~~~~g~~~~p~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~ 220 (255)
...+|.+++|.+.+. .. .++...|.+.+++.+++.++. ++++|++++
T Consensus 353 ~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 353 CNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 567899999999984 22 134456777777766665554 566776544
No 14
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.67 E-value=1.3e-14 Score=119.06 Aligned_cols=151 Identities=15% Similarity=0.126 Sum_probs=117.1
Q ss_pred eeeecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHH
Q 045196 59 QLNVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLI 135 (255)
Q Consensus 59 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (255)
+...++++.+....+.+ ..++..++.++.|+++||+|||+++..+.++.++..++..+. ++.+.+++
T Consensus 32 ~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~ 101 (412)
T TIGR02332 32 LTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFA----------TGPESLYL 101 (412)
T ss_pred HhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh----------cCHHHHHH
Confidence 34456667665554433 345667788999999999999999999998888888887776 46677777
Q ss_pred HHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhh--------hcCCCchhHHHHHHHHHH
Q 045196 136 IEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVVG--------RMSPSLSFLVFGALSIFS 207 (255)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~~ 207 (255)
..++.+++.+...+....++.|.+|+++|+++.++.+....+|.+++|.+.+.. ..+|++.|++.++..++.
T Consensus 102 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~ 181 (412)
T TIGR02332 102 LRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVIL 181 (412)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHH
Confidence 788888888887888888999999999999999999999999999998887632 236788888877776654
Q ss_pred HHH-HHHhccCCC
Q 045196 208 GVL-SLWLPETKN 219 (255)
Q Consensus 208 ~~~-~~~~~e~~~ 219 (255)
.++ .+++||++.
T Consensus 182 ~~~~~~~~~~~p~ 194 (412)
T TIGR02332 182 GVMTWFWLDDSPD 194 (412)
T ss_pred HHHHhhccCCCcc
Confidence 443 356677654
No 15
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.66 E-value=7.5e-15 Score=118.36 Aligned_cols=166 Identities=13% Similarity=0.043 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHhhheeeeecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccc
Q 045196 44 VMTAGFGVGFVYYGIQLNVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNN 120 (255)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~ 120 (255)
.++..+........++.+..+.+.+...... ...++..++.++.|+++||+|||++++.+..+.++..++..+....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 87 (365)
T TIGR00900 8 QLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALL 87 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3333444444445555555556665544433 3445777889999999999999999999888777766665554210
Q ss_pred CCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhH
Q 045196 121 NNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFL 198 (255)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~ 198 (255)
+..+.+..++..++.+++.+...+...++++|.+|+++|+++.++.+....+|.+++|.+.+. ...+++..++
T Consensus 88 -----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~ 162 (365)
T TIGR00900 88 -----GGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIW 162 (365)
T ss_pred -----CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 112566677777777777777888899999999999999999999999999999999998874 3456666777
Q ss_pred HHHHHHHHHHHHHHHh
Q 045196 199 VFGALSIFSGVLSLWL 214 (255)
Q Consensus 199 ~~~~~~~~~~~~~~~~ 214 (255)
+.++..+++.+..+.+
T Consensus 163 ~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 163 VDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 6666555554444433
No 16
>TIGR00895 2A0115 benzoate transport.
Probab=99.65 E-value=9.2e-15 Score=119.22 Aligned_cols=151 Identities=17% Similarity=0.107 Sum_probs=112.8
Q ss_pred eeeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHH
Q 045196 58 IQLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQL 134 (255)
Q Consensus 58 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (255)
.+.+.+.++.+..... ....++.+++.++.|+++||+|||+.+..+.++.+++.++.... .+.+..+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 109 (398)
T TIGR00895 40 APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA----------TNVTQLL 109 (398)
T ss_pred HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc----------cchHHHH
Confidence 3445556666654433 33445778889999999999999999999988887777766655 4566666
Q ss_pred HHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHH-H
Q 045196 135 IIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVL-S 211 (255)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~ 211 (255)
+..++.+++.+...+...+++.|.+|++.|+++.++......+|..++|.+.+. ...+++..+++.+++.++..++ .
T Consensus 110 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 110 ILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLM 189 (398)
T ss_pred HHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHH
Confidence 667777777777788999999999999999999999999999999999988873 3446667777765555544443 3
Q ss_pred HHhccCC
Q 045196 212 LWLPETK 218 (255)
Q Consensus 212 ~~~~e~~ 218 (255)
+++||+.
T Consensus 190 ~~~~~~~ 196 (398)
T TIGR00895 190 RFLPESI 196 (398)
T ss_pred HhCCCCC
Confidence 4567654
No 17
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.65 E-value=1e-14 Score=114.91 Aligned_cols=171 Identities=17% Similarity=0.121 Sum_probs=118.3
Q ss_pred hhcChhHHHHHHHHHHHHHHHHHHhhheeee-----ecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhc--chhHHH
Q 045196 31 LWGTKWAAKRLIMVMTAGFGVGFVYYGIQLN-----VGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFT--NRRLLL 100 (255)
Q Consensus 31 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~--grr~~l 100 (255)
+++||. ++..++..++..+.-|++..| .+..+.+...+... .=+++++|++++||++||+ |||...
T Consensus 248 VL~Nk~----iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~ 323 (448)
T COG2271 248 VLKNKL----IWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPM 323 (448)
T ss_pred HHcChH----HHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchH
Confidence 456665 445555555554444444433 34456655444333 3458899999999999996 788766
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHH-hh
Q 045196 101 SRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALML-GA 179 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~ 179 (255)
.+.+.+....+++..+.. ++.+.++..++.++.++...+..-+......|..|++.-|++.|+...++.+ |+
T Consensus 324 ~~i~~~~i~~~~~~~w~~-------~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga 396 (448)
T COG2271 324 ALIFMLLITASLVLYWLA-------PNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGA 396 (448)
T ss_pred HHHHHHHHHHHHHHHHcC-------CCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhH
Confidence 555554444444444432 2345567777778888888888788889999999999999999999999998 77
Q ss_pred hhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHH
Q 045196 180 SVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSL 212 (255)
Q Consensus 180 ~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
..+....++ +..+|...|.+..+.++++.++..
T Consensus 397 ~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 397 ALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred HhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence 777777763 345788888888877777766543
No 18
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.64 E-value=3.1e-14 Score=120.02 Aligned_cols=204 Identities=17% Similarity=0.158 Sum_probs=136.5
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhhe-eee----ecccCch-h-HHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGI-QLN----VGNLNFN-L-YFSVALNALMEIPAVVIGTVLLSFTNRRLL 99 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~-~-~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 99 (255)
.++++++ +..++++.+.+....++.+..+.. .+| ++..+.. . .....+.++..+++.+++.++.||+|||++
T Consensus 283 ~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~l 361 (513)
T KOG0254|consen 283 SWGELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKL 361 (513)
T ss_pred cHHHhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 4667776 555777777777776665443222 222 3333433 2 556667778888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCC--CCCCCchHHHH-HHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHH
Q 045196 100 LSRSAYVAGSASILCTLFSNNNNNK--GKGGGSWPQLI-IEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALM 176 (255)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 176 (255)
++.+...+.++.++++.......+. ......+..++ ..+....+..+..++.|.+.+|++|.+.|+++.++....++
T Consensus 362 ll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~ 441 (513)
T KOG0254|consen 362 LLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNW 441 (513)
T ss_pred HHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHH
Confidence 9999999999888777654322211 11122333333 33333444556678999999999999999999999999998
Q ss_pred HhhhhhhhHHHh-hhc-CCCchhHHHHHHHHHHHH--HHHHhccCCCCCchHhHHhhhh
Q 045196 177 LGASVSPLLVVV-GRM-SPSLSFLVFGALSIFSGV--LSLWLPETKNAPLYETLKQQGE 231 (255)
Q Consensus 177 ~g~~~~p~~~~~-~~~-~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~~ 231 (255)
+.+++....... ... +....|..+++.+.+..+ ..+++|||+++++++..+..++
T Consensus 442 ~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 442 LWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHc
Confidence 887655444332 222 235667777777666655 3457799999998887655443
No 19
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.63 E-value=1.9e-14 Score=117.71 Aligned_cols=149 Identities=17% Similarity=0.160 Sum_probs=109.9
Q ss_pred eeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 60 LNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 60 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
.+.++++.+..... .+..++..++.++.|+++||+|||+++.++.++.++..++..+. .+.+..++.
T Consensus 37 ~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~ 106 (405)
T TIGR00891 37 EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFA----------PGYITMFIA 106 (405)
T ss_pred HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh----------ccHHHHHHH
Confidence 33455566544433 33445778899999999999999999999988888887777665 466777777
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcC--CCchhHHHHHHHHHHHHHHH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMS--PSLSFLVFGALSIFSGVLSL 212 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~ 212 (255)
.++.+++.+...+...+++.|.+|+++|+++.++.+....+|.+++|.+.+. ...+ |+..+.+.++..++..+...
T Consensus 107 ~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~ 186 (405)
T TIGR00891 107 RLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRK 186 (405)
T ss_pred HHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHH
Confidence 7888887777888889999999999999999999999999999999988763 2222 55556554444444443344
Q ss_pred HhccCC
Q 045196 213 WLPETK 218 (255)
Q Consensus 213 ~~~e~~ 218 (255)
.+||++
T Consensus 187 ~~~~~~ 192 (405)
T TIGR00891 187 NIPEAE 192 (405)
T ss_pred hCCCCh
Confidence 567654
No 20
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.63 E-value=1.1e-14 Score=120.40 Aligned_cols=150 Identities=13% Similarity=0.131 Sum_probs=113.6
Q ss_pred eeeeecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHH
Q 045196 58 IQLNVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQL 134 (255)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (255)
.+.+.++++.+......+ ..++..++.++.|+++||+|||+++.++.++.+++.++..+. ++.+.++
T Consensus 46 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----------~~~~~l~ 115 (434)
T PRK11663 46 MPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS----------SSLWAFA 115 (434)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH----------hHHHHHH
Confidence 345556677765554433 345777899999999999999999999999988888777666 4566666
Q ss_pred HHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHH-H
Q 045196 135 IIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVL-S 211 (255)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~ 211 (255)
+..++.+++.+...+....++.|.+|+++|++++++.+....+|+.++|.+.+. ...+|++.|++.+++.++..+. .
T Consensus 116 ~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~ 195 (434)
T PRK11663 116 LLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLC 195 (434)
T ss_pred HHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence 666666666676778888999999999999999999999999999999988773 3456777787777665544433 3
Q ss_pred HHhccC
Q 045196 212 LWLPET 217 (255)
Q Consensus 212 ~~~~e~ 217 (255)
+++||+
T Consensus 196 ~~~~~~ 201 (434)
T PRK11663 196 WRLRDK 201 (434)
T ss_pred HHcCCC
Confidence 455654
No 21
>PRK10054 putative transporter; Provisional
Probab=99.62 E-value=7e-14 Score=114.20 Aligned_cols=161 Identities=14% Similarity=0.091 Sum_probs=112.8
Q ss_pred HHHHHHHhhheeeee-cccCchhHHHHHHH---HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 045196 48 GFGVGFVYYGIQLNV-GNLNFNLYFSVALN---ALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNN 123 (255)
Q Consensus 48 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (255)
.+........++.++ +.+|.+......+. .+..+++.++.|+++||+|||+++.++.++.++..+.+.+.
T Consensus 20 ~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~------ 93 (395)
T PRK10054 20 TIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV------ 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH------
Confidence 333333333333333 45677665554443 35667788999999999999999998888877777666665
Q ss_pred CCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh-hhcCCCchhHHHHH
Q 045196 124 KGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-GRMSPSLSFLVFGA 202 (255)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-~~~~~~~~~~~~~~ 202 (255)
++.+..++...+.+...+...+....+..|.+|++.|+++.++.+...++|.+++|.+.++ ...++...|.+.++
T Consensus 94 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~ 169 (395)
T PRK10054 94 ----NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAI 169 (395)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 3455444444444444445567788899999999999999999999999999999998884 34567778887777
Q ss_pred HHHHHHHHH-HHhccCC
Q 045196 203 LSIFSGVLS-LWLPETK 218 (255)
Q Consensus 203 ~~~~~~~~~-~~~~e~~ 218 (255)
+.+++.+.. +++|+++
T Consensus 170 ~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 170 CSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHhccc
Confidence 776665444 3456543
No 22
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.62 E-value=5.8e-15 Score=116.29 Aligned_cols=153 Identities=12% Similarity=0.090 Sum_probs=124.1
Q ss_pred eeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHH
Q 045196 59 QLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLI 135 (255)
Q Consensus 59 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (255)
+...++.+.+..... ....+..-++.++.|.++||.+.|..+.+++++++++.+++.+. ++.+.+.+
T Consensus 53 p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs----------~s~~~~~~ 122 (448)
T COG2271 53 PALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFS----------PSLFLFAV 122 (448)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhh----------hHHHHHHH
Confidence 344445556654444 34456777899999999999999999999999999999999987 47778888
Q ss_pred HHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHH--Hh--hhcCCCchhHHHHHHHHHHHHHH
Q 045196 136 IEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLV--VV--GRMSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
+.++.+++.+..+|.+...+...+|.++||+..++-++..++|+.+.|.+. +. .+.+++..|++.++++++..++.
T Consensus 123 l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~ 202 (448)
T COG2271 123 LWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALIL 202 (448)
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999888887 53 34478889999998888776665
Q ss_pred H-Hh---ccCCCCC
Q 045196 212 L-WL---PETKNAP 221 (255)
Q Consensus 212 ~-~~---~e~~~~~ 221 (255)
+ .+ |++.+.+
T Consensus 203 ~~~~rd~Pqs~GLP 216 (448)
T COG2271 203 LFLLRDRPQSEGLP 216 (448)
T ss_pred HHHhCCCccccCCC
Confidence 4 44 4444444
No 23
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.61 E-value=7.9e-14 Score=113.87 Aligned_cols=148 Identities=14% Similarity=0.074 Sum_probs=114.8
Q ss_pred eecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHH
Q 045196 61 NVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIE 137 (255)
Q Consensus 61 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
+.++++.+...... ...++..++.++.|+++||+|||+++..+.++.++..++..+. ++.+..++..
T Consensus 46 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~r 115 (394)
T PRK10213 46 MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA----------NSFSLLLIGR 115 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH----------ChHHHHHHHH
Confidence 44566666554433 3455777889999999999999999999999998887777665 5677888888
Q ss_pred HHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHH-Hh
Q 045196 138 GVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSL-WL 214 (255)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~ 214 (255)
++.+++.+...+....+++|.+|+++|+.+.++......++..++|.+.+. ...+|+..|++.+++++++.+... ..
T Consensus 116 ~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~ 195 (394)
T PRK10213 116 ACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSL 195 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 888888888888999999999999999999999999999999999998874 334677777777666655544333 35
Q ss_pred ccCC
Q 045196 215 PETK 218 (255)
Q Consensus 215 ~e~~ 218 (255)
||++
T Consensus 196 p~~~ 199 (394)
T PRK10213 196 PSLP 199 (394)
T ss_pred CCCC
Confidence 6643
No 24
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.61 E-value=7.9e-14 Score=113.87 Aligned_cols=152 Identities=18% Similarity=0.123 Sum_probs=111.8
Q ss_pred eeeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHH
Q 045196 58 IQLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQL 134 (255)
Q Consensus 58 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (255)
.+.+..+++.+..... ....++..++.++.|+++||+|||+.++.+..+..+..+..... ++.+..+
T Consensus 26 lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~----------~~~~~~~ 95 (392)
T PRK10473 26 LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA----------ETSSLFL 95 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh----------CcHHHHH
Confidence 3444555666554443 33345667788999999999999999999988888777776655 3555556
Q ss_pred HHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH-
Q 045196 135 IIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS- 211 (255)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~- 211 (255)
+..++.+.+.+...+..+.++.|.+|+++|+++.++.+....++..++|.+.+. ...++...+++.+++.++..++.
T Consensus 96 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 175 (392)
T PRK10473 96 AGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSL 175 (392)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHH
Confidence 666666766666777889999999999999999999999999999999988774 33456666777776666655543
Q ss_pred HHhccCCC
Q 045196 212 LWLPETKN 219 (255)
Q Consensus 212 ~~~~e~~~ 219 (255)
+++||+++
T Consensus 176 ~~~~~~~~ 183 (392)
T PRK10473 176 FILKETRP 183 (392)
T ss_pred HHcCCCCC
Confidence 45677643
No 25
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.61 E-value=7.8e-14 Score=116.42 Aligned_cols=176 Identities=11% Similarity=-0.039 Sum_probs=101.8
Q ss_pred hhcChhHHHHHHHHHHHHHHH-HHHhhheeeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 045196 31 LWGTKWAAKRLIMVMTAGFGV-GFVYYGIQLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYV 106 (255)
Q Consensus 31 l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~ 106 (255)
+++++..+...+..++..... ....+...+..+.+|.+..... ....++.+++.+++|+++||+|||+.+.....+
T Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~ 333 (467)
T PRK09556 254 VLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIAL 333 (467)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 567766444333332222222 1222222233345666654433 334457788999999999999999876655443
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHH-hhhhhhhH
Q 045196 107 AGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALML-GASVSPLL 185 (255)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~p~~ 185 (255)
..+......... ..+.+...+..++.+++..+.......+..|.+|++.|+++.|+.+..+++ |++++|.+
T Consensus 334 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~ 405 (467)
T PRK09556 334 ALIIFTLGVYQH--------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVG 405 (467)
T ss_pred HHHHHHHHHHHh--------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhh
Confidence 333222222221 123333333344444333333333446677999999999999999999997 66899998
Q ss_pred HHh-hh-------------cCCCchhHHHHHHHHHHHHHHHHh
Q 045196 186 VVV-GR-------------MSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 186 ~~~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
.+. .+ .++...|.+.+++.+++.+..+++
T Consensus 406 ~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 406 LGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 884 22 345556767666666665555443
No 26
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.61 E-value=4.1e-14 Score=116.45 Aligned_cols=190 Identities=12% Similarity=-0.069 Sum_probs=119.2
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecc-cCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGN-LNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
.++.++++|..+...+..+..........+ .+.+..+ .+.+..... ...+++.+++.++.+++.||.++++.+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~ 294 (417)
T PRK10489 216 GFRFLLASPVVGGIALLGGLLTMASAVRVL-YPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLL 294 (417)
T ss_pred HHHHHHcChHHHHHHHHHHHHHHHHhHHHh-hHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHH
Confidence 355667777644433333322222222122 2333344 555543332 33456778889999999999887777777
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhh
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVS 182 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 182 (255)
+..+.++..+++... .+.+...+..++.+++.+...+...+++.|..|++.|+++.|+.+....+|..++
T Consensus 295 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g 364 (417)
T PRK10489 295 STLGSFLAVGLFGLM----------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIG 364 (417)
T ss_pred HHHHHHHHHHHHHcc----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHH
Confidence 766665555544433 2334444455555555555556777899999999999999999999999999999
Q ss_pred hhHHHh--hhcCCCchhHHHHHHHHHH-HHHHHHhccCCCCCchHhHH
Q 045196 183 PLLVVV--GRMSPSLSFLVFGALSIFS-GVLSLWLPETKNAPLYETLK 227 (255)
Q Consensus 183 p~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~ 227 (255)
|.+.+. ...+....++..+++.++. .+....+|++++++.+|.++
T Consensus 365 ~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (417)
T PRK10489 365 AALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEV 412 (417)
T ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccC
Confidence 999984 3334555666666555444 44445668888776665543
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.61 E-value=1.2e-14 Score=118.18 Aligned_cols=149 Identities=22% Similarity=0.192 Sum_probs=115.3
Q ss_pred eeecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 60 LNVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 60 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
.+.+.++.+.... .....++..++.++.|+++||+|||+.+.++.++.++..++..+. .+.+..++.
T Consensus 19 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 88 (399)
T TIGR00893 19 MLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA----------GAYVSLYIL 88 (399)
T ss_pred HHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH----------cCHHHHHHH
Confidence 3444556554433 334456778899999999999999999999988888888777776 466777777
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHH-H
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSL-W 213 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~ 213 (255)
.++.+++.+...+....++.|.+|+++|+++.++......+|..++|.+.+. ...++++.+.+.+++.++..+..+ .
T Consensus 89 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 89 RVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKF 168 (399)
T ss_pred HHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhhe
Confidence 8888888888888999999999999999999999999999999999998873 445677777777777666555443 3
Q ss_pred hccCC
Q 045196 214 LPETK 218 (255)
Q Consensus 214 ~~e~~ 218 (255)
.||++
T Consensus 169 ~~~~~ 173 (399)
T TIGR00893 169 IPDPP 173 (399)
T ss_pred ecCCC
Confidence 45543
No 28
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.61 E-value=1.5e-14 Score=119.05 Aligned_cols=188 Identities=14% Similarity=0.032 Sum_probs=126.0
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
.+++.+.+++.++..++..++..+...+.....+.+..+.+.+...... ...++.+++.++.|+++||+|||+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~ 87 (417)
T PRK10489 8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL 87 (417)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe
Confidence 3455566677766555555555555555555555555665555544433 3446777889999999999999999888
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhh
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVS 182 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 182 (255)
+..+.++..+.+...... ...+.+...+..++.+++.+...+...++++|.+|++.|+++.++.+....+|..++
T Consensus 88 ~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 162 (417)
T PRK10489 88 ARGTCGLGFIGLALNAFL-----PEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVIS 162 (417)
T ss_pred hHHHHHHHHHHHHHHHHc-----CCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhH
Confidence 777666655544321100 113445555566666666565667778899999999999999999999999999999
Q ss_pred hhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 183 PLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 183 p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
|.+.+. ...++.+.+.+.++..+++.+..+.+|+++
T Consensus 163 ~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 200 (417)
T PRK10489 163 PALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALP 200 (417)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 998873 334566667766666666655556667653
No 29
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.61 E-value=3.9e-14 Score=114.68 Aligned_cols=173 Identities=11% Similarity=0.020 Sum_probs=110.7
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHH---HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYF---SVALNALMEIPAVVIGTVLLSFTNRRLLLSRS 103 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~ 103 (255)
+.++.++++..+......+...+.........+.+.++.+.+... ...+..++.+++.++.|+++||+|||+.+.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~ 276 (377)
T TIGR00890 197 TVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIV 276 (377)
T ss_pred hHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHH
Confidence 456778877654333322222222211111112233445544332 23445567788999999999999999999888
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhh
Q 045196 104 AYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSP 183 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p 183 (255)
..+..+..+++.... ....+..+...++.+++.+...+....+++|.+|+++|+++.|+.+....+|+.++|
T Consensus 277 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~ 348 (377)
T TIGR00890 277 FGISAVGMAAMLFIP--------MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGG 348 (377)
T ss_pred HHHHHHHHHHHHHcc--------cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHH
Confidence 887777766655441 112222333334445555555567778899999999999999999999999999999
Q ss_pred hHHHh--hhcCCCchhHHHHHHHHHH
Q 045196 184 LLVVV--GRMSPSLSFLVFGALSIFS 207 (255)
Q Consensus 184 ~~~~~--~~~~~~~~~~~~~~~~~~~ 207 (255)
.+.+. ...++...+.+.+++.+++
T Consensus 349 ~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 349 LIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 98884 3445666677666665554
No 30
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.60 E-value=4.7e-14 Score=113.21 Aligned_cols=147 Identities=20% Similarity=0.188 Sum_probs=113.3
Q ss_pred eeecccCchhHH---HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 60 LNVGNLNFNLYF---SVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 60 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
.+.++++.+... ......++..++.++.|+++||+|||+++.++.++.++..++..+. .+.+..++.
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 91 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA----------SNFWLLLIA 91 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH----------CCHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh----------hhHHHHhhh
Confidence 445566655433 3334456778899999999999999999999998888885555543 355677778
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH-HH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS-LW 213 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~ 213 (255)
.++.+++.+...+....++.|.+|+++|+++.++......+|.+++|.+.+. ...+++..+++.+++.++..++. ++
T Consensus 92 ~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~ 171 (352)
T PF07690_consen 92 RFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILF 171 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhh
Confidence 8888888888889999999999999999999999999999999999999884 34567788888888888776643 34
Q ss_pred hcc
Q 045196 214 LPE 216 (255)
Q Consensus 214 ~~e 216 (255)
+++
T Consensus 172 ~~~ 174 (352)
T PF07690_consen 172 LPE 174 (352)
T ss_dssp C--
T ss_pred hhh
Confidence 443
No 31
>PRK03545 putative arabinose transporter; Provisional
Probab=99.60 E-value=1.4e-13 Score=112.42 Aligned_cols=148 Identities=17% Similarity=0.068 Sum_probs=114.3
Q ss_pred eeecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 60 LNVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 60 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
.+.++++.+......+ ..++..++.+..|+++||+|||+++..+..+.++..+...+. ++.+..++.
T Consensus 34 ~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~ 103 (390)
T PRK03545 34 DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA----------WNFTVLLIS 103 (390)
T ss_pred HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh----------ccHHHHHHH
Confidence 3455667766555444 334556778889999999999999999999888888877776 467777777
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHH-H
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSL-W 213 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~ 213 (255)
.++.+.+.+...+...+++.|.+|+++|+++.|+......+|..++|.+.+. ...+|++.|++.++++++..+..+ .
T Consensus 104 r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~ 183 (390)
T PRK03545 104 RIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777776666678888999999999999999999999999999999998874 345777888888877766655443 4
Q ss_pred hccC
Q 045196 214 LPET 217 (255)
Q Consensus 214 ~~e~ 217 (255)
+||.
T Consensus 184 ~~~~ 187 (390)
T PRK03545 184 LPLL 187 (390)
T ss_pred CCCC
Confidence 5654
No 32
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.60 E-value=3.9e-14 Score=118.23 Aligned_cols=139 Identities=15% Similarity=0.044 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 73 VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 73 ~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
.....++..++.++.|+++||+|||++++++.++..+..++..+.. ...+.+..++..++.+++.+...+...
T Consensus 77 ~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~r~l~G~~~~~~~~~~~ 149 (481)
T TIGR00879 77 VSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAA-------FALSVEMLIVGRVLLGIGVGIASALVP 149 (481)
T ss_pred HHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhc-------cccchHHHHHHHHHHHhhhhHHHhHHH
Confidence 3445567788999999999999999999999888888777765542 112334667777888887888888899
Q ss_pred hhhccccchhcHHHHHHHHHHHHHHhhhhhhhHH---Hh--hhcCCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 153 IYCVELFPTNVRNIAVSFLRQALMLGASVSPLLV---VV--GRMSPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
.++.|.+|++.|+++.++.+....+|.+++|.+. .. ...+|+..|++.+...++..+..+++||+.
T Consensus 150 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~ 220 (481)
T TIGR00879 150 MYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESP 220 (481)
T ss_pred HHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCh
Confidence 9999999999999999999999999999999988 43 334566677776555555555556677763
No 33
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.60 E-value=7.8e-14 Score=113.44 Aligned_cols=150 Identities=20% Similarity=0.123 Sum_probs=113.9
Q ss_pred eeecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 60 LNVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 60 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
.+.++++.+...... ...++..++.++.|+++||+|||+.+..+..+.++..+..... ++.+..++.
T Consensus 30 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 99 (385)
T TIGR00710 30 EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS----------NNIETLLVL 99 (385)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH----------ccHHHHHHH
Confidence 344566666544433 3445778899999999999999999999988888887777665 456666677
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH-HH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS-LW 213 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~ 213 (255)
.++.+++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.+. ...+++..+++.+++.++..+.. +.
T Consensus 100 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 100 RFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred HHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777777777778889999999999999999999999999999999998874 33456667777776666655544 34
Q ss_pred hccCCC
Q 045196 214 LPETKN 219 (255)
Q Consensus 214 ~~e~~~ 219 (255)
.||+++
T Consensus 180 ~~~~~~ 185 (385)
T TIGR00710 180 LPETLP 185 (385)
T ss_pred CCCCCC
Confidence 566544
No 34
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.60 E-value=9.8e-14 Score=116.24 Aligned_cols=148 Identities=14% Similarity=0.182 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHh-hhhhh
Q 045196 72 SVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAAS-TAFDV 150 (255)
Q Consensus 72 ~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 150 (255)
.....++..+++.+++++++||+|||++++.+.++++++.+++..... ............++.+.+.+ ...+.
T Consensus 311 ~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (479)
T PRK10077 311 QTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFY------TQAPGIVALLSMLFYVAAFAMSWGPV 384 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHh------cCcccHHHHHHHHHHHHHHhccccch
Confidence 334456778889999999999999999999999888887776654320 00111122222222222222 23467
Q ss_pred hhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--------hhcCCCchhHHHHHHHHHHHHHHH-HhccCCCCC
Q 045196 151 MYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--------GRMSPSLSFLVFGALSIFSGVLSL-WLPETKNAP 221 (255)
Q Consensus 151 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~ 221 (255)
.+.+++|.+|++.|+++.|+.+..+++++++++.+.+. ...++...|+++++.+++++++.+ +.||+++++
T Consensus 385 ~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 464 (479)
T PRK10077 385 CWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKT 464 (479)
T ss_pred hHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 89999999999999999999999999999888665542 134556677777777776666554 568998876
Q ss_pred chHh
Q 045196 222 LYET 225 (255)
Q Consensus 222 ~~~~ 225 (255)
.+|.
T Consensus 465 ~~~~ 468 (479)
T PRK10077 465 LEEM 468 (479)
T ss_pred HHHH
Confidence 6544
No 35
>TIGR00898 2A0119 cation transport protein.
Probab=99.59 E-value=3.8e-14 Score=119.51 Aligned_cols=135 Identities=16% Similarity=0.099 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 73 VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 73 ~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
..+..++.+++.++.|+++||+|||++++++.++.+++.++..+. .+.+.+++..++.+++.++..+...
T Consensus 133 ~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~r~l~G~~~~~~~~~~~ 202 (505)
T TIGR00898 133 QSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS----------PNYTVFLVFRLLVGMGIGGIWVQAV 202 (505)
T ss_pred HHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc----------ccHHHHHHHHHHHHhhccchHHHHH
Confidence 344556888899999999999999999999998888888777766 4677778888888888888889999
Q ss_pred hhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhhhcCCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 153 IYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVVGRMSPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
+++.|.+|++.|+.+.++......+|.+++|.+...... |++.+++.++..++..+..+++||+.
T Consensus 203 ~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-wr~~~~~~~i~~~~~~~~~~~~~esp 267 (505)
T TIGR00898 203 VLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD-WRWLQLAVSLPTFLFFLLSWFVPESP 267 (505)
T ss_pred HHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 999999999999999999988888888888887764322 66777777777776666667778864
No 36
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.59 E-value=5.5e-14 Score=113.50 Aligned_cols=178 Identities=11% Similarity=0.011 Sum_probs=106.8
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHH-HHHhhheeeeecccCchhHHHHHHHHHHHHHHHHHHHHHHhhcchh---HHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGV-GFVYYGIQLNVGNLNFNLYFSVALNALMEIPAVVIGTVLLSFTNRR---LLLSR 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr---~~l~~ 102 (255)
+++++++++..+...+..++..... .+..|. +.++.+.+.+.. ......+..+.+.+..++++||..|| +....
T Consensus 184 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wl-p~~L~~~g~s~~-~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~ 261 (368)
T TIGR00903 184 EFGALAGRKDLWIIGAILGFGVALFDNLAIWL-EAALRPAGLEDI-AGDAVALAILAGLIGVAVIPDRVARAGLRSIYIR 261 (368)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCChH-HHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHH
Confidence 4778888887544333333222222 122222 223334455433 33444455556666778899987653 33222
Q ss_pred -HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhh
Q 045196 103 -SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 103 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 181 (255)
...+.++........ .+.+..+.+..+.+++.....+..+++.+|.+|++.|+++.|+.+..++++++.
T Consensus 262 ~~~~~~a~~~~~~~~~----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~ 331 (368)
T TIGR00903 262 AAALLIAAFFLALAFE----------LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVA 331 (368)
T ss_pred HHHHHHHHHHHHHHHc----------cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHH
Confidence 333333333333322 223334444555555666666778899999999999999999999999999999
Q ss_pred hhhHHHhhhcCCCchhHHHHHHHHHHHHHHHHhcc
Q 045196 182 SPLLVVVGRMSPSLSFLVFGALSIFSGVLSLWLPE 216 (255)
Q Consensus 182 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 216 (255)
+|.+.+....+....|.++++..+++.+..+.+++
T Consensus 332 ~~~~~~~~~~~~~~~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 332 LALAAMLFISSAEAYFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99888743334455677777777777666554443
No 37
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.59 E-value=2e-13 Score=114.16 Aligned_cols=145 Identities=17% Similarity=0.067 Sum_probs=100.6
Q ss_pred eecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHH
Q 045196 61 NVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIE 137 (255)
Q Consensus 61 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
+.++++.+..... ....++..++.++.|+++||+|||+++.++.++.++..++..+. .+.+.+++..
T Consensus 62 l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~----------~s~~~l~~~r 131 (476)
T PLN00028 62 IRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV----------SSATGFIAVR 131 (476)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh----------cCHHHHHHHH
Confidence 3445666544433 23345677788999999999999999998888888777766665 3555555556
Q ss_pred HHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh-----hh------cCCCchhHHHHHHHHH
Q 045196 138 GVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-----GR------MSPSLSFLVFGALSIF 206 (255)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-----~~------~~~~~~~~~~~~~~~~ 206 (255)
++.+++.+.. .....+++|.+|++.|+++.|+.+..+.+|+.+++.+... .. .+|++.|++.+++.++
T Consensus 132 ~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~ 210 (476)
T PLN00028 132 FFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHII 210 (476)
T ss_pred HHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHH
Confidence 6666555443 3455678999999999999999987777777666554431 11 3577888888887776
Q ss_pred HHHHHHHhcc
Q 045196 207 SGVLSLWLPE 216 (255)
Q Consensus 207 ~~~~~~~~~e 216 (255)
..++.+++++
T Consensus 211 ~~l~~~~~~~ 220 (476)
T PLN00028 211 MGILVLTLGQ 220 (476)
T ss_pred HHHHHHHHcC
Confidence 6655555543
No 38
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.59 E-value=7.5e-14 Score=113.95 Aligned_cols=147 Identities=11% Similarity=0.072 Sum_probs=102.8
Q ss_pred eeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHH
Q 045196 59 QLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLI 135 (255)
Q Consensus 59 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (255)
+.+..+++.+..... ....+...+..++.|+++||+|||++++++..+.++..+++.+.. +. ++
T Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~----------~~---~~ 93 (393)
T PRK11195 27 IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI----------HP---LL 93 (393)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH----------HH---HH
Confidence 334455555443332 334457778899999999999999999999988877766655441 21 44
Q ss_pred HHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh-hhcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 136 IEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-GRMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
..++.+.+.+...|...++++|++|+++|+++.++......++.+++|.+.++ ....+...+.+.+.+.+++.+..+.+
T Consensus 94 ~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~l 173 (393)
T PRK11195 94 AYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLFI 173 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 55667777888889999999999999999999999999999999999999884 22223333333333333333334556
Q ss_pred ccCC
Q 045196 215 PETK 218 (255)
Q Consensus 215 ~e~~ 218 (255)
||.+
T Consensus 174 ~~~~ 177 (393)
T PRK11195 174 PRLG 177 (393)
T ss_pred CCCc
Confidence 7654
No 39
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.58 E-value=7e-14 Score=115.38 Aligned_cols=136 Identities=15% Similarity=0.129 Sum_probs=105.0
Q ss_pred hhheeeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCch
Q 045196 55 YYGIQLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSW 131 (255)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (255)
.+..+.+.++++.+..... .+..++..++.++.|+++||+|||+++.++.++.+++.++..+. ++.+
T Consensus 38 ~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~----------~~~~ 107 (426)
T PRK12307 38 FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLA----------SGVI 107 (426)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH----------hHHH
Confidence 3333444456666544333 33456778899999999999999999999999988888777776 4667
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHH
Q 045196 132 PQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVF 200 (255)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~ 200 (255)
..++..++.+++.+...+....++.|.+|++.|+++.++......+|.+++|.+.+. ...+|+..+++.
T Consensus 108 ~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~ 178 (426)
T PRK12307 108 MLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVG 178 (426)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHH
Confidence 777788888887777888899999999999999999999999888999988887763 234565666553
No 40
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.58 E-value=1e-13 Score=113.76 Aligned_cols=149 Identities=18% Similarity=0.180 Sum_probs=109.9
Q ss_pred eeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 60 LNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 60 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
.+.++++.+..... ....++..++.++.|+++||+|||+++..+.++..+..++..+. .+.+..++.
T Consensus 40 ~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 109 (406)
T PRK11551 40 RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA----------WDFPSLLVA 109 (406)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh----------ccHHHHHHH
Confidence 34455666554433 33446778899999999999999999999988877777666655 466666777
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH-HH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS-LW 213 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~ 213 (255)
.++.+++.+...+...+++.|.+|++.|+++.++.+....+|+.++|.+... ...+++..+++.+++.++..++. ++
T Consensus 110 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (406)
T PRK11551 110 RLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRW 189 (406)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777877777778889999999999999999999999999999999887763 22345556666665554444333 45
Q ss_pred hccCC
Q 045196 214 LPETK 218 (255)
Q Consensus 214 ~~e~~ 218 (255)
+||+.
T Consensus 190 l~~~~ 194 (406)
T PRK11551 190 LPESR 194 (406)
T ss_pred CCCCh
Confidence 67753
No 41
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.58 E-value=2.9e-13 Score=111.96 Aligned_cols=186 Identities=12% Similarity=0.096 Sum_probs=98.4
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeee-----ecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchh
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLN-----VGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRR 97 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr 97 (255)
.++++++++++.+...+.. .+.....+|....| .+..+.+..... .+..++..++.++.|+++||+|||
T Consensus 233 ~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr 309 (432)
T PRK10406 233 GSLKGLWRNRRAFIMVLGF---TAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR 309 (432)
T ss_pred ccHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 3578888876533222221 11112222222222 233455443322 223345567778889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHH
Q 045196 98 LLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALML 177 (255)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 177 (255)
+.+.++..+.++....+..... ...+.+..+.+..+..+..+...+..+.+.+|.+|++.|+++.|+.+..+++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~ 383 (432)
T PRK10406 310 TSMLCFGSLAALFTVPILSALQ------NVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANA 383 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHH
Confidence 9887766554433332221110 0112222222222233333333456778899999999999999999988775
Q ss_pred -hhhhhhhHHHh-hhcCCCc-hhHHHHHHHHHHHHHHHHhccCCCCC
Q 045196 178 -GASVSPLLVVV-GRMSPSL-SFLVFGALSIFSGVLSLWLPETKNAP 221 (255)
Q Consensus 178 -g~~~~p~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~ 221 (255)
++...|.+.++ ...+.+. .++..++..+++.+..+++ ++++++
T Consensus 384 ~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~l-~~~~~~ 429 (432)
T PRK10406 384 LFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLML-HRKGKG 429 (432)
T ss_pred HHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHh-hhcccc
Confidence 34457776663 2233233 3444445555554444443 444443
No 42
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.58 E-value=5.4e-14 Score=117.78 Aligned_cols=145 Identities=18% Similarity=0.095 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCC--CCCCCCchHHHHHHHHHHHHHhhhhhhh
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNN--KGKGGGSWPQLIIEGVGFMAASTAFDVM 151 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (255)
....++..++.++.|+++||+|||++++++..+.+++.+...+....... .++....+.+++.+++.+++.++..+..
T Consensus 62 s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~ 141 (479)
T PRK10077 62 ASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLS 141 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHH
Confidence 34456888899999999999999999999988877776655542100000 0000122355677888888888888999
Q ss_pred hhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh----------hhcCCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 152 YIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV----------GRMSPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 152 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
.++++|.+|+++|+.++++......+|.++++.+... ...+|++.|++.++..++..+..+++||+.
T Consensus 142 ~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~ 218 (479)
T PRK10077 142 PMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETP 218 (479)
T ss_pred HHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 9999999999999999999998888888887765431 124567777777666666655556778874
No 43
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.58 E-value=1.2e-13 Score=116.12 Aligned_cols=149 Identities=19% Similarity=0.201 Sum_probs=107.6
Q ss_pred eeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHH
Q 045196 59 QLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLI 135 (255)
Q Consensus 59 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (255)
+.+..+++.+..... ....++..++.++.|+++||+|||+.+.++.++.++..+++.+. .+.+..++
T Consensus 44 ~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~ 113 (496)
T PRK03893 44 TEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFA----------PGYWTLFI 113 (496)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH----------hHHHHHHH
Confidence 344455666554433 33445777889999999999999999999988888887777765 46666777
Q ss_pred HHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHH
Q 045196 136 IEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLW 213 (255)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (255)
..++.+++.+...+....++.|.+|++.|+++.++......+|..++|.+.+. ...+|+..|++.+...++..+....
T Consensus 114 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~ 193 (496)
T PRK03893 114 ARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKN 193 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 77777877777778889999999999999999999999999999999988874 3334555555433333222222234
Q ss_pred hccC
Q 045196 214 LPET 217 (255)
Q Consensus 214 ~~e~ 217 (255)
+||+
T Consensus 194 ~p~~ 197 (496)
T PRK03893 194 LPEA 197 (496)
T ss_pred CCCc
Confidence 4554
No 44
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.58 E-value=3.8e-14 Score=119.88 Aligned_cols=138 Identities=17% Similarity=0.103 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhh
Q 045196 71 FSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDV 150 (255)
Q Consensus 71 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
....+..++..+|++++|.++||+|||++++++.++..++.++.++. .+.+..++++++.+++.++...+
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a----------~~~~~~~~~Rfl~G~~~~~~~~~ 191 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA----------PNYWMFLIFRFLSGFFGSGPLTV 191 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh----------CcHHHHHHHHHHHHhhccchhHH
Confidence 34455667889999999999999999999999999999999888887 68889999999999999999999
Q ss_pred hhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhhhcCCCchhHHHHHHHHHHHHHHHHhccCCC
Q 045196 151 MYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVVGRMSPSLSFLVFGALSIFSGVLSLWLPETKN 219 (255)
Q Consensus 151 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (255)
.+.+..|+++++.|+.+..+ ......++.++|...++...+|++.+++..+..++..++.++.||+++
T Consensus 192 ~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~r 259 (521)
T KOG0255|consen 192 GFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPR 259 (521)
T ss_pred hHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChH
Confidence 99999999999999999999 777778888887777755457778888877777766665445557654
No 45
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.58 E-value=1.2e-13 Score=113.40 Aligned_cols=147 Identities=15% Similarity=0.089 Sum_probs=111.1
Q ss_pred cccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHH
Q 045196 63 GNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGV 139 (255)
Q Consensus 63 ~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (255)
++++.+..... .+..++..++.++.|+++||+|||++++.+..+.+++.++.... ++.+.+++..++
T Consensus 44 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a----------~~~~~l~~~r~l 113 (413)
T PRK15403 44 RDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT----------TSMTQFLIARFI 113 (413)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc----------CCHHHHHHHHHH
Confidence 34555543333 33345777889999999999999999999988888877777665 466677777777
Q ss_pred HHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH-HHhcc
Q 045196 140 GFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS-LWLPE 216 (255)
Q Consensus 140 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~e 216 (255)
.+++.+...+..++++.|.+|++.|++++++.+....++..++|.+.+. ...+|++.|++.+++.+++.+.. +.+||
T Consensus 114 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 114 QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7776655556778889999999999999999999999999999988873 23467778888877777666543 45788
Q ss_pred CCC
Q 045196 217 TKN 219 (255)
Q Consensus 217 ~~~ 219 (255)
+++
T Consensus 194 ~~~ 196 (413)
T PRK15403 194 TVK 196 (413)
T ss_pred Ccc
Confidence 654
No 46
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.57 E-value=1.5e-13 Score=114.27 Aligned_cols=153 Identities=10% Similarity=-0.034 Sum_probs=103.8
Q ss_pred eeeecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHH
Q 045196 59 QLNVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLI 135 (255)
Q Consensus 59 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (255)
+.+.+. +.+...... ...++..++.++.|+++||+|||++++++.++.++..+++.+... ...+.+..++
T Consensus 53 p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~ 125 (452)
T PRK11273 53 PYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW------ATSSIAVMFV 125 (452)
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhc------ccccHHHHHH
Confidence 333444 665544433 344577788999999999999999999999888887777665420 0123445555
Q ss_pred HHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhh-hhhhHHH-h-hhcCCCchhHHHHHHHHHHHHH-H
Q 045196 136 IEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGAS-VSPLLVV-V-GRMSPSLSFLVFGALSIFSGVL-S 211 (255)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~-~~p~~~~-~-~~~~~~~~~~~~~~~~~~~~~~-~ 211 (255)
..++.+++.+...+.....+.|.+|++.|+++.++.+....+|+. .+|.+.. . ...+|+..|++.++++++..++ .
T Consensus 126 ~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 126 LLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAF 205 (452)
T ss_pred HHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 666666666666676777888999999999999999888888764 4555432 2 2335667777777666655443 3
Q ss_pred HHhccCC
Q 045196 212 LWLPETK 218 (255)
Q Consensus 212 ~~~~e~~ 218 (255)
+++||+.
T Consensus 206 ~~~~~~~ 212 (452)
T PRK11273 206 AMMRDTP 212 (452)
T ss_pred HHccCCH
Confidence 5566643
No 47
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.57 E-value=4.4e-13 Score=109.75 Aligned_cols=138 Identities=17% Similarity=0.087 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhh
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYI 153 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
....++.+++.++.+++.||+|||+.+..+..+.++..+++... ++.+..++..++.+++.+..++....
T Consensus 256 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~G~~~~~~~~~~~~ 325 (399)
T PRK05122 256 TLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA----------PSPWMALIGAALTGFGFSLVFPALGV 325 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh----------ccHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 34556778889999999999999999888877777666655544 34444555555666666666677677
Q ss_pred hhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHhccCCCCC
Q 045196 154 YCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWLPETKNAP 221 (255)
Q Consensus 154 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 221 (255)
...|.+|++.|+++.++.+....+|..++|.+.+. ...++...+.+.+++++++.++.++++++++++
T Consensus 326 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (399)
T PRK05122 326 EAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRA 395 (399)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 78899999999999999999999998888887773 334566677777777777766666666544443
No 48
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.57 E-value=3.1e-13 Score=110.01 Aligned_cols=151 Identities=14% Similarity=0.087 Sum_probs=115.0
Q ss_pred eeeeecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHH
Q 045196 58 IQLNVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQL 134 (255)
Q Consensus 58 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (255)
++.+.+++|.+.... .....++..++.++.|+++||+|||+++.++..+.++..++..+. ++.+..+
T Consensus 26 l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~----------~~~~~l~ 95 (382)
T PRK10091 26 LTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS----------SSYLMLA 95 (382)
T ss_pred hHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh----------CcHHHHH
Confidence 344455666654443 334456888899999999999999999999999998888877776 4677777
Q ss_pred HHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH-
Q 045196 135 IIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS- 211 (255)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~- 211 (255)
+..++.+++.+...+....++.|.+|+++|+.+.++......++..++|.+.+. ...+|++.|.+.+++.++..+..
T Consensus 96 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 96 IGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 778888877776667778889999999999999999988888999998888764 33467777887777666554433
Q ss_pred HHhccCC
Q 045196 212 LWLPETK 218 (255)
Q Consensus 212 ~~~~e~~ 218 (255)
+++||.+
T Consensus 176 ~~lp~~~ 182 (382)
T PRK10091 176 FWVPDIR 182 (382)
T ss_pred HhCCCCC
Confidence 4567754
No 49
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.57 E-value=4e-13 Score=109.95 Aligned_cols=164 Identities=13% Similarity=0.075 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHhhheee-eecccCchhHHHHHHHHH---HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc
Q 045196 44 VMTAGFGVGFVYYGIQL-NVGNLNFNLYFSVALNAL---MEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSN 119 (255)
Q Consensus 44 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~ 119 (255)
.++..+.....+..++. +.+..|.+......+.++ ...+..++.|+++||+|||+++..+..+.++..+.+...
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~-- 96 (400)
T PRK11646 19 NMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA-- 96 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh--
Confidence 33333443333333333 345667776666555543 445567889999999999999999999888888877665
Q ss_pred cCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh-hhcCCCchhH
Q 045196 120 NNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-GRMSPSLSFL 198 (255)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-~~~~~~~~~~ 198 (255)
++.+..++..++.+++.+...+...+++.|.+|++.|+++.++.+....+|..++|.+.++ ...+++..|+
T Consensus 97 --------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~ 168 (400)
T PRK11646 97 --------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCA 168 (400)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4566666666666766666667888999999999999999999999999999999998873 3455666777
Q ss_pred HHHHHHHHHHHHH-HHhccC
Q 045196 199 VFGALSIFSGVLS-LWLPET 217 (255)
Q Consensus 199 ~~~~~~~~~~~~~-~~~~e~ 217 (255)
+.+...+++.++. ++.||.
T Consensus 169 ~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 169 TGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHhCCcc
Confidence 7666655554433 445653
No 50
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.56 E-value=6.2e-13 Score=110.59 Aligned_cols=176 Identities=16% Similarity=0.009 Sum_probs=97.7
Q ss_pred hhcChhHHHHHHHHHHHHHHHHHHhhheeeeec-ccCchhHHH---HHHHHHHHHHHHHHHHHHHhhc--chhHHHH-HH
Q 045196 31 LWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVG-NLNFNLYFS---VALNALMEIPAVVIGTVLLSFT--NRRLLLS-RS 103 (255)
Q Consensus 31 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~--grr~~l~-~~ 103 (255)
++|++..|...+..++............+.++. ..+.+.... ..+..++.+++.++.|+++||+ |||.... ..
T Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~ 328 (452)
T PRK11273 249 VLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF 328 (452)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHH
Confidence 556666544333333333332222222233343 345543333 2334567778999999999999 5554332 22
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhh-h
Q 045196 104 AYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASV-S 182 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~-~ 182 (255)
..+..+..+.+.... ..+.+..++..+..+....+.......+..|.+|++.||++.|+.+....+|+.+ +
T Consensus 329 ~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g 400 (452)
T PRK11273 329 MTLVTIATIVYWLNP--------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAA 400 (452)
T ss_pred HHHHHHHHHHHHHhc--------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhh
Confidence 222222222222221 1222322222333333222222334456789999999999999999988888654 7
Q ss_pred hhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 183 PLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 183 p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
|.+.+. ...++...|.+.+++++++++....+
T Consensus 401 ~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 401 SAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred hhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 888773 44567777888888777777665544
No 51
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.56 E-value=1.6e-13 Score=115.11 Aligned_cols=156 Identities=17% Similarity=0.207 Sum_probs=119.3
Q ss_pred HHhhheeeeecccCchhH---HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 045196 53 FVYYGIQLNVGNLNFNLY---FSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGG 129 (255)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (255)
......+.+..+++.+.. .......++..++.++.|+++||+|||+.++++.++..+..++.... ++
T Consensus 20 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----------~~ 89 (485)
T TIGR00711 20 IVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA----------PN 89 (485)
T ss_pred HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc----------CC
Confidence 334444555666666543 33344556788899999999999999999999998888887777655 46
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHH
Q 045196 130 SWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFS 207 (255)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~ 207 (255)
.+..++..++.+++.+...+....++.|.+|++.|+++.++......+|..++|.+.++ ...+|++.|++.+.+.+++
T Consensus 90 ~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~ 169 (485)
T TIGR00711 90 LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIV 169 (485)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHH
Confidence 67777778888888788888999999999999999999999999999999999998874 3456777787777666665
Q ss_pred HHHH-HHhccCC
Q 045196 208 GVLS-LWLPETK 218 (255)
Q Consensus 208 ~~~~-~~~~e~~ 218 (255)
.++. +++||++
T Consensus 170 ~~~~~~~~~~~~ 181 (485)
T TIGR00711 170 VVVAFFILPRDK 181 (485)
T ss_pred HHHHHHHcCCcc
Confidence 5544 3456543
No 52
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.56 E-value=1.3e-13 Score=115.02 Aligned_cols=164 Identities=17% Similarity=0.173 Sum_probs=107.3
Q ss_pred eeeecccCchh---HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchH-HH
Q 045196 59 QLNVGNLNFNL---YFSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWP-QL 134 (255)
Q Consensus 59 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 134 (255)
+.+....|.+. ........++.+++.++.++++||+|||+.+.++..+.+++.+++.+......+..+....+. ..
T Consensus 308 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (481)
T TIGR00879 308 PTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIV 387 (481)
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHH
Confidence 33444555544 233344556778899999999999999999988877777666665532110000000001222 22
Q ss_pred HHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHH
Q 045196 135 IIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSL 212 (255)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
...+...++..+..+....++.|.+|++.|+++.++.+...++|++++|.+.+. ...++...|++.+++++++.++.+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 388 FILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVY 467 (481)
T ss_pred HHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHh
Confidence 222222333333446777888999999999999999999999999999998873 344677778888888777766654
Q ss_pred -HhccCCCCCc
Q 045196 213 -WLPETKNAPL 222 (255)
Q Consensus 213 -~~~e~~~~~~ 222 (255)
+.||+++++.
T Consensus 468 ~~~~~~~~~~~ 478 (481)
T TIGR00879 468 FFLPETKGRTL 478 (481)
T ss_pred eecccCCCCCh
Confidence 5688776543
No 53
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.56 E-value=4.6e-13 Score=108.55 Aligned_cols=178 Identities=12% Similarity=0.077 Sum_probs=111.5
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeee-cccCchhHHHHHHH---HHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNV-GNLNFNLYFSVALN---ALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
+.++.+++++++......+..+..........+.+. ...+.+......+. .+..+++.++.|++.||+|||+.+.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~ 270 (375)
T TIGR00899 191 EVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLL 270 (375)
T ss_pred hhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHH
Confidence 344566676644433333333332222222223232 34555544433332 23456677899999999999998887
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhh
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVS 182 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 182 (255)
+.++..+........ ++.+..+...++.+++.+...+....+..|..|++ |+++.++.+...++|..++
T Consensus 271 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g 339 (375)
T TIGR00899 271 AALAGVAFYTGLAAD----------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIA 339 (375)
T ss_pred HHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHH
Confidence 766555444443333 24454445555556656666677788889998875 6699999999999999999
Q ss_pred hhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHhc
Q 045196 183 PLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWLP 215 (255)
Q Consensus 183 p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (255)
|.+.+. ...++...+.+.+++.+++.++.++++
T Consensus 340 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 340 GSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHHHheec
Confidence 999884 334566677777777777766655554
No 54
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.56 E-value=8.4e-14 Score=116.37 Aligned_cols=142 Identities=15% Similarity=0.099 Sum_probs=88.0
Q ss_pred cccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhH-------HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchH
Q 045196 63 GNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRL-------LLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWP 132 (255)
Q Consensus 63 ~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (255)
...|.+..... .+..++.+++.+++|+++||++||+ ...+...+.++..+++... .+.+.
T Consensus 281 ~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~----------~~~~~ 350 (476)
T PLN00028 281 DRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRA----------NSLGA 350 (476)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhccc----------chHHH
Confidence 34566544433 3345677889999999999998752 2222222222222222211 23333
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhh-hcCCCchhHHHHHHHHHHHHHH
Q 045196 133 QLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVVG-RMSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
.++..++.+++.....+..+++.+++.| +.|+++.|+.+..+.+|++++|.+.+.. ..++...|++.+++.+++.++.
T Consensus 351 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 351 AIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHH
Confidence 3334444444444455667778888765 6799999999888888998888876532 2245667888888887777766
Q ss_pred HHhc
Q 045196 212 LWLP 215 (255)
Q Consensus 212 ~~~~ 215 (255)
++++
T Consensus 430 ~~~~ 433 (476)
T PLN00028 430 AFIH 433 (476)
T ss_pred Hhee
Confidence 6553
No 55
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.55 E-value=4.6e-13 Score=110.57 Aligned_cols=154 Identities=7% Similarity=-0.026 Sum_probs=94.5
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHH---HHhhheeeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVG---FVYYGIQLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLL 100 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l 100 (255)
+++++++++.++.............. ......+.+....+.+..... .+..++.+++.++.+++.||+|||+.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~ 299 (426)
T PRK12307 220 SMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF 299 (426)
T ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 56778887764433322222111111 111122334444555543332 334567788999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHH-HHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhh
Q 045196 101 SRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGV-GFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGA 179 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 179 (255)
..+.++..+..+...... ......+....+ ..+...+..+..+.++.|.+|++.|+++.|+.+..+.+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~ 370 (426)
T PRK12307 300 SIGLLMSFLFIFPLFRIP---------QDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSG 370 (426)
T ss_pred HHHHHHHHHHHHHHHHHc---------cccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHH
Confidence 888777666555444331 122222211111 2222223345667788999999999999999999999999
Q ss_pred hhhhhHHHhh
Q 045196 180 SVSPLLVVVG 189 (255)
Q Consensus 180 ~~~p~~~~~~ 189 (255)
.++|.+.++.
T Consensus 371 ~~gp~~~g~l 380 (426)
T PRK12307 371 TFNSMAATWL 380 (426)
T ss_pred HHHHHHHHHH
Confidence 9999998853
No 56
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.55 E-value=5.2e-13 Score=106.15 Aligned_cols=168 Identities=17% Similarity=0.142 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhe----eeeecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 045196 38 AKRLIMVMTAGFGVGFVYYGI----QLNVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSA 110 (255)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~ 110 (255)
+.+++...+..|+....-+.. +...++++.+.... ...++++..++.++...+.||+.||++++....+..++
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 444555555555554333333 33444566664443 34566788889999999999999999999999999999
Q ss_pred HHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--
Q 045196 111 SILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-- 188 (255)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-- 188 (255)
.++..+. .+++.+++.+++.++..+..++...++..++.|+++|++++++......++.+++..+..+
T Consensus 92 n~l~alA----------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig 161 (394)
T COG2814 92 NLLSALA----------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG 161 (394)
T ss_pred HHHHHHh----------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH
Confidence 9999988 5889999999999999999999999999999999999999999999998888887776663
Q ss_pred hhcCCCchhHHHHHHHHHHHHHH-HHhc
Q 045196 189 GRMSPSLSFLVFGALSIFSGVLS-LWLP 215 (255)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 215 (255)
+..+|+.+|+..+.+.+++.+.. ..+|
T Consensus 162 ~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 162 QLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 44679999999999988887765 4668
No 57
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.55 E-value=2.1e-13 Score=111.84 Aligned_cols=145 Identities=12% Similarity=-0.028 Sum_probs=96.5
Q ss_pred eeecccCchhHH---HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 60 LNVGNLNFNLYF---SVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 60 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
.+..+.|.+... .....+++.+++.++.|+++||+|||+.+..+.....+..+.+... .+.+...+.
T Consensus 245 ~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 314 (406)
T PRK11551 245 SLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA----------PSFAGMLLA 314 (406)
T ss_pred HHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc----------CcHHHHHHH
Confidence 334445554332 3334456788899999999999999998887666555554444433 234444444
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhh-hcCCC--chhHHHHHHHHHHHHHHHH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVVG-RMSPS--LSFLVFGALSIFSGVLSLW 213 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~ 213 (255)
.++.+++..+..+..+++.+|.+|++.|+++.|+.+....+|+.++|.+.+.. +.... ..++....+.+++.+..++
T Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 315 GFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 45555555566788889999999999999999999999999999999999842 22222 2333344444444444444
Q ss_pred h
Q 045196 214 L 214 (255)
Q Consensus 214 ~ 214 (255)
+
T Consensus 395 ~ 395 (406)
T PRK11551 395 L 395 (406)
T ss_pred H
Confidence 4
No 58
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.55 E-value=5e-13 Score=109.67 Aligned_cols=149 Identities=14% Similarity=0.007 Sum_probs=110.7
Q ss_pred eecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHH
Q 045196 61 NVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIE 137 (255)
Q Consensus 61 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
+.++++.+..... ....++..++.++.|+++||+|||+++.++..+.+++.+..... ++.+..++..
T Consensus 39 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~~ 108 (406)
T PRK15402 39 VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA----------QSIEQFTLLR 108 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH----------ccHHHHHHHH
Confidence 3455666544433 33445777888999999999999999999988888887777665 4566666667
Q ss_pred HHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH-HHh
Q 045196 138 GVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS-LWL 214 (255)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~ 214 (255)
++.+.+.+...+..+..+.|.+|++.|.++.++......++..++|.+.+. ...+++..+++.+++.+++.+.. +..
T Consensus 109 ~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 188 (406)
T PRK15402 109 FLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAM 188 (406)
T ss_pred HHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhC
Confidence 777766666667888899999999999999999888888888899988763 33467778887777776665544 345
Q ss_pred ccCCC
Q 045196 215 PETKN 219 (255)
Q Consensus 215 ~e~~~ 219 (255)
||+++
T Consensus 189 ~~~~~ 193 (406)
T PRK15402 189 PETAG 193 (406)
T ss_pred CCCCc
Confidence 77643
No 59
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.55 E-value=4.5e-13 Score=112.62 Aligned_cols=156 Identities=14% Similarity=0.040 Sum_probs=116.4
Q ss_pred HHhhheeeeecccCchhHH---HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC
Q 045196 53 FVYYGIQLNVGNLNFNLYF---SVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGG 129 (255)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (255)
......+.+..+++.+... ......++...+.++.|+++||+|||++++++..+..+..+..... ++
T Consensus 24 iv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a----------~~ 93 (495)
T PRK14995 24 VLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFS----------PT 93 (495)
T ss_pred HHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHc----------CC
Confidence 3444455556666665433 3333455667788999999999999999999999998888887776 57
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhcccc-chhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHH
Q 045196 130 SWPQLIIEGVGFMAASTAFDVMYIYCVELF-PTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIF 206 (255)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~ 206 (255)
.+.+++..++.+++.+...+.....+.+.+ |+++|+++.|+......+|..++|.+.++ ...+|++.|++...++++
T Consensus 94 ~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~ 173 (495)
T PRK14995 94 ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLV 173 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 777777888888777777777777776665 77899999999999999999999999884 345677888877766666
Q ss_pred HHHHH-HHhccCC
Q 045196 207 SGVLS-LWLPETK 218 (255)
Q Consensus 207 ~~~~~-~~~~e~~ 218 (255)
..++. +++|+.+
T Consensus 174 ~~~l~~~~l~~~~ 186 (495)
T PRK14995 174 VMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHHhCCCCC
Confidence 55544 4556643
No 60
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.55 E-value=2.5e-13 Score=112.35 Aligned_cols=139 Identities=16% Similarity=0.073 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 045196 78 LMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVE 157 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (255)
++..+|.+++|+++||+|||+.+.++.++.++..++..+.+.+..- .......+++.+++.+++.++.++...+++.|
T Consensus 74 ~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e 151 (432)
T PRK10406 74 LMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETI--GTWAPALLLLARLFQGLSVGGEYGTSATYMSE 151 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhH--HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHH
Confidence 4555899999999999999999999999999888888776200000 00011246677888888888888999999999
Q ss_pred ccchhcHHHHHHHHHHHHHHhhhhhhhHHHh----------hhcCCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 158 LFPTNVRNIAVSFLRQALMLGASVSPLLVVV----------GRMSPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 158 ~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
.+|+++|+...++.+.....|.++++.+... ...+|+..|++.++..++..++...+||++
T Consensus 152 ~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~ 222 (432)
T PRK10406 152 VAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETS 222 (432)
T ss_pred hCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 9999999999988877666666666654321 145777888876666655543333456653
No 61
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.54 E-value=3.2e-13 Score=93.71 Aligned_cols=130 Identities=18% Similarity=0.210 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhc
Q 045196 77 ALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCV 156 (255)
Q Consensus 77 ~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
.++.+++.++.+++.||+|||+.+..+.....+..+..... .+.+...+..++.+++.+...+....+..
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 77 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS----------SNITVLIIARFLQGFGAAFALVAGAALIA 77 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh----------ccHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 45678889999999999999999998888877777666554 35566666667777777777788999999
Q ss_pred cccchhcHHHHHHHHHHHHHHhhhhhhhHHHhh--hcCCCchhHHHHHHHHHHHHHHHH-hcc
Q 045196 157 ELFPTNVRNIAVSFLRQALMLGASVSPLLVVVG--RMSPSLSFLVFGALSIFSGVLSLW-LPE 216 (255)
Q Consensus 157 e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~e 216 (255)
|.+|++.|+++.++.+....++..++|.+.+.. ..++...+.+.+.+.+++.+..++ .||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999988742 234555667666666666555443 344
No 62
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.54 E-value=1.9e-13 Score=112.67 Aligned_cols=129 Identities=12% Similarity=0.145 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhh
Q 045196 75 LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIY 154 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
+..+...++.+++|+++||+|||+.+.++..+.++..++..+. ++.+..+...++.+...+...+....+
T Consensus 270 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~----------~~~~~~~~~~~l~g~~~~~~~~~~~~~ 339 (420)
T PRK09528 270 FQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA----------TGPLEVSILKLLHAFEVPFLLVGVFKY 339 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc----------ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677899999999999999999888888777766666554 355555555555555555555666788
Q ss_pred hccccchhcHHHHHHH-HHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHH
Q 045196 155 CVELFPTNVRNIAVSF-LRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLW 213 (255)
Q Consensus 155 ~~e~~p~~~r~~~~~~-~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (255)
++|.+|++.|++..+. .++...+|.+++|.+.++ ...++...|...+++.++..++.++
T Consensus 340 ~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 340 ITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 8999999999887766 466678999999998884 3446777788777777666555443
No 63
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.54 E-value=3.2e-13 Score=109.65 Aligned_cols=148 Identities=16% Similarity=0.139 Sum_probs=112.7
Q ss_pred eecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHH
Q 045196 61 NVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIE 137 (255)
Q Consensus 61 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
+.++++.+..... ....++..++.++.|+++||+|||+.+..+.++.++..+.+.+. .+.+..++..
T Consensus 17 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~ 86 (377)
T PRK11102 17 IAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA----------QTIDQLIYMR 86 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH----------ccHHHHHHHH
Confidence 3445566544433 33445677889999999999999999999998888888877766 4566666777
Q ss_pred HHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH-HHh
Q 045196 138 GVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS-LWL 214 (255)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~ 214 (255)
++.+++.+...+...+++.|.+|++.|+++.++.+....+|..++|.+.+. ...++...+++.++++++..++. +++
T Consensus 87 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (377)
T PRK11102 87 FLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFI 166 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhC
Confidence 777777777778888999999999999999999999999999999998873 33456667777777666655444 456
Q ss_pred ccCC
Q 045196 215 PETK 218 (255)
Q Consensus 215 ~e~~ 218 (255)
||+.
T Consensus 167 ~~~~ 170 (377)
T PRK11102 167 PETL 170 (377)
T ss_pred CccC
Confidence 7653
No 64
>PRK03699 putative transporter; Provisional
Probab=99.54 E-value=5.8e-13 Score=108.86 Aligned_cols=164 Identities=8% Similarity=-0.040 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhe----eeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 045196 38 AKRLIMVMTAGFGVGFVYYGI----QLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSA 110 (255)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~ 110 (255)
++.++..++.++......+.. +.+.++++.+..... ....++..++.++.|+++||+|||+.+..+.++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 85 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILA 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 455555555555443333332 233445566544433 3344677889999999999999999999988888877
Q ss_pred HHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--
Q 045196 111 SILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-- 188 (255)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-- 188 (255)
.++..+. ++.+..++..++.+++.+...+....++.|.+|++.|+.+.++.+....+++.++|.+.+.
T Consensus 86 ~~l~~~~----------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 86 VAGLMFS----------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred HHHHHHc----------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777665 4566666777777777777777888899999999999999999888888888888887763
Q ss_pred h-hcCCCchhHHHHHHHHHHHHHH
Q 045196 189 G-RMSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 189 ~-~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
. ..+|+..|.+.+++.++..++.
T Consensus 156 ~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 156 ARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred hccccHHHHHHHHHHHHHHHHHHH
Confidence 2 2467777777776665554433
No 65
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.54 E-value=2.6e-14 Score=115.79 Aligned_cols=149 Identities=13% Similarity=0.110 Sum_probs=111.5
Q ss_pred eeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHH
Q 045196 59 QLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLI 135 (255)
Q Consensus 59 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (255)
+.+.+.++.+..... ....++..++.++.|+++||+|||+.+.++.++.+++.++..+. .+.+..++
T Consensus 19 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 88 (379)
T TIGR00881 19 PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS----------TSLWVMAA 88 (379)
T ss_pred HHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh----------hhHHHHHH
Confidence 344455566554433 33446777889999999999999999999999888888877776 46677777
Q ss_pred HHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhh-HHHh--hhcCCCchhHHHHHHHHHHHHHH-
Q 045196 136 IEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPL-LVVV--GRMSPSLSFLVFGALSIFSGVLS- 211 (255)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~- 211 (255)
..++.+++.+...+...+++.|.+|+++|+++.++.+....+|..++|. +... ...+++..+++.+++.++..++.
T Consensus 89 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 89 LWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICF 168 (379)
T ss_pred HHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 7777787777778899999999999999999999999999999999984 4432 33456667777766665544443
Q ss_pred HHhccC
Q 045196 212 LWLPET 217 (255)
Q Consensus 212 ~~~~e~ 217 (255)
++.||+
T Consensus 169 ~~~~~~ 174 (379)
T TIGR00881 169 LLLRDS 174 (379)
T ss_pred eeeCCC
Confidence 344554
No 66
>PRK10504 putative transporter; Provisional
Probab=99.54 E-value=7.1e-13 Score=110.86 Aligned_cols=167 Identities=16% Similarity=0.123 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHH----HhhheeeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 045196 40 RLIMVMTAGFGVGF----VYYGIQLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASI 112 (255)
Q Consensus 40 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~ 112 (255)
.++..+...+...+ .....+.+.+++|.+..... ....++..++.++.|+++||+|||++++.+..+.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 34444444444332 23334455566777654432 333456677899999999999999999988877777666
Q ss_pred HHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hh
Q 045196 113 LCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GR 190 (255)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~ 190 (255)
...+. .+.+..++..++.+++.+...+...+++.|.+|++.|+++.++.+....+|..++|.+.+. ..
T Consensus 91 ~~~~~----------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~ 160 (471)
T PRK10504 91 FCALS----------GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY 160 (471)
T ss_pred HHHHh----------CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Confidence 65544 4566667777788887777788899999999999999999999999999999999998874 33
Q ss_pred cCCCchhHHHHHHHHHHHHHHH-Hhcc
Q 045196 191 MSPSLSFLVFGALSIFSGVLSL-WLPE 216 (255)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~-~~~e 216 (255)
.+|++.|.+...+..++.+... ..|+
T Consensus 161 ~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 161 ASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4566677776666655555443 3344
No 67
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.53 E-value=3.1e-13 Score=111.81 Aligned_cols=162 Identities=13% Similarity=0.099 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHHhhheee----ee-cccCchhHHHHHHH---HHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHHHH
Q 045196 40 RLIMVMTAGFGVGFVYYGIQL----NV-GNLNFNLYFSVALN---ALMEIPAVVIGTVLLSFT-NRRLLLSRSAYVAGSA 110 (255)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~---~~~~~~~~~~~g~l~dr~-grr~~l~~~~~~~~~~ 110 (255)
.++..+...+...+.+|++.. ++ ..+|.+......+. .+...++.+++|+++||+ |||+.++++.++.++.
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg 89 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIG 89 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHH
Confidence 344444454555555554432 22 23566554444333 345566889999999999 9999999999888887
Q ss_pred HHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchh--cHHHHHHHHHHHHHHhhhhhhhHHHh
Q 045196 111 SILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTN--VRNIAVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
.+++.... .......+...+...+.+...+...++++|.+|++ .|.+++++.+...++|++++|.+.++
T Consensus 90 ~lll~~~~---------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~ 160 (493)
T PRK15462 90 HVVLGASE---------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160 (493)
T ss_pred HHHHHHhh---------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH
Confidence 76554321 11122222222333344445566778999999986 69999999999999999999999985
Q ss_pred h--hcCCCchhHHHHHHHHHHHHH
Q 045196 189 G--RMSPSLSFLVFGALSIFSGVL 210 (255)
Q Consensus 189 ~--~~~~~~~~~~~~~~~~~~~~~ 210 (255)
. ..+++..|.+.++..+++.+.
T Consensus 161 L~~~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 161 AQEEYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred HHhhhChHHHHHHHHHHHHHHHHH
Confidence 3 456777787766554444443
No 68
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.53 E-value=1.7e-12 Score=107.56 Aligned_cols=153 Identities=8% Similarity=0.024 Sum_probs=100.0
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecc-cCch--hHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGN-LNFN--LYFSVALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
..+++++++|.++......++.++.........+++.+. .+.. ......+..++.+++.++.++++||+|||+.+.+
T Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~ 292 (437)
T TIGR00792 213 QIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAG 292 (437)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 456778888876654444444433333222122222222 2211 1122233456778889999999999999999988
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccc-------hhcHHHHHHHHHHHH
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFP-------TNVRNIAVSFLRQAL 175 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~ 175 (255)
+..+.++..+.+.+.. .+.+..++..++.+++.+...+..+++.+|..+ .+.+|+..|+.++..
T Consensus 293 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 363 (437)
T TIGR00792 293 GILLMVLGYLIFFFAG---------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVR 363 (437)
T ss_pred HHHHHHHHHHHHHHcc---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHH
Confidence 8877776665554431 233444555556666667777888999998865 456789999999999
Q ss_pred HHhhhhhhhHHH
Q 045196 176 MLGASVSPLLVV 187 (255)
Q Consensus 176 ~~g~~~~p~~~~ 187 (255)
.+|..+++.+.+
T Consensus 364 ~~g~~lg~~i~g 375 (437)
T TIGR00792 364 KLGQALAGFLVG 375 (437)
T ss_pred HHHHHHHHHHHH
Confidence 999999988877
No 69
>PRK11043 putative transporter; Provisional
Probab=99.53 E-value=1.6e-12 Score=106.57 Aligned_cols=147 Identities=13% Similarity=0.051 Sum_probs=107.3
Q ss_pred eecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHH
Q 045196 61 NVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIE 137 (255)
Q Consensus 61 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
+.++++.+......+ ..++..++.++.|+++||+|||+.+..+..+..+..++..+. ++.+..++..
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~~ 101 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV----------ESAAQLLVLR 101 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh----------cCHHHHHHHH
Confidence 344556655544433 345677899999999999999999999888887777766665 4556666666
Q ss_pred HHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHhc
Q 045196 138 GVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWLP 215 (255)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (255)
++.+++.+...+....++.|.+|.+.++...+..+....++..++|.+.+. ...+++..+++.+++.++..+..++++
T Consensus 102 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 181 (401)
T PRK11043 102 FVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLK 181 (401)
T ss_pred HHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcC
Confidence 666665555556677888999999989888888888888888999988874 345666777777777666655555555
Q ss_pred cC
Q 045196 216 ET 217 (255)
Q Consensus 216 e~ 217 (255)
|.
T Consensus 182 ~~ 183 (401)
T PRK11043 182 PS 183 (401)
T ss_pred CC
Confidence 44
No 70
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.53 E-value=2.2e-12 Score=105.08 Aligned_cols=173 Identities=11% Similarity=-0.035 Sum_probs=122.4
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
.++++++|+|+++...+..++.+......+...+.+.++.|.+......+ ..+..+++.++.+++.||+|+|+.+.+
T Consensus 196 ~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~ 275 (382)
T TIGR00902 196 SAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLI 275 (382)
T ss_pred hhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHH
Confidence 45778899988666555555444443322222334455677765444333 345677788899999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHH-HHHHhhhh
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQ-ALMLGASV 181 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~-~~~~g~~~ 181 (255)
+.+.+.+...++.+. ++.+..+...++.++..+...+....++.+. |++.|++++++.+. ...+|..+
T Consensus 276 ~~~~~~~~~~~~~~~----------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~ 344 (382)
T TIGR00902 276 SAIACVGRWAIIGAI----------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAI 344 (382)
T ss_pred HHHHHHHHHHHHHhH----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHH
Confidence 999888888777665 4667777777888888888888888899988 99999999999864 44688889
Q ss_pred hhhHHHh--hhcCCCchhHHHHHHHHHHHHH
Q 045196 182 SPLLVVV--GRMSPSLSFLVFGALSIFSGVL 210 (255)
Q Consensus 182 ~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 210 (255)
+|.+.|+ +..+ ...|++.+++.+++.++
T Consensus 345 g~~~~G~l~~~~g-~~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 345 FTAFAGFIYPTLG-AGTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHhcc-HHHHHHHHHHHHHHHHH
Confidence 9999984 2223 24466666666655443
No 71
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.52 E-value=1.8e-12 Score=105.95 Aligned_cols=150 Identities=13% Similarity=0.044 Sum_probs=108.2
Q ss_pred eeecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 60 LNVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 60 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
.+.++++.+...... ...++..++.++.|+++||+|||+.+.++.....+..+..... ++.+..++.
T Consensus 33 ~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~ 102 (394)
T PRK11652 33 DMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA----------HSLTVLIAA 102 (394)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH----------ccHHHHHHH
Confidence 344556666544433 3445777889999999999999999999888887777766655 456666666
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHH-HHH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVL-SLW 213 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~ 213 (255)
.++.+++.+...+....+..|.++.+.|+.+.++.+....++..++|.+.+. ...+++..+++.+++.++..++ .++
T Consensus 103 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 182 (394)
T PRK11652 103 SAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARW 182 (394)
T ss_pred HHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHh
Confidence 7777766666667777888999999999999999888888888899988874 2345666777766655544433 345
Q ss_pred hccCCC
Q 045196 214 LPETKN 219 (255)
Q Consensus 214 ~~e~~~ 219 (255)
.||+++
T Consensus 183 ~~~~~~ 188 (394)
T PRK11652 183 MPETRP 188 (394)
T ss_pred CCccCc
Confidence 677543
No 72
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.52 E-value=4.1e-13 Score=112.04 Aligned_cols=141 Identities=10% Similarity=-0.024 Sum_probs=103.6
Q ss_pred cCchhHHHHHH---HHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHH
Q 045196 65 LNFNLYFSVAL---NALMEIPAVVIGTVLLSF-TNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVG 140 (255)
Q Consensus 65 ~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (255)
+|.+......+ ..++..++.+++|+++|| +|||+++.++.++.++..+++.+. .+.+..++...+.
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~----------~~~~~~~~~~~l~ 112 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS----------IYPDLIFYGLGTI 112 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc----------ccHhHHHHHHHHH
Confidence 56665444433 345677899999999999 899999999999888888777665 2344444455556
Q ss_pred HHHHhhhhhhhhhhhccccchhc---HHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHhc
Q 045196 141 FMAASTAFDVMYIYCVELFPTNV---RNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWLP 215 (255)
Q Consensus 141 ~~~~~~~~~~~~~~~~e~~p~~~---r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (255)
+.+.+...+...++++|.+|++. |+++.++.+...++|++++|.+.++ ...+++..|.+.++..+++.+..++.+
T Consensus 113 g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 113 AVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 66666677888899999998754 8889999999999999999999884 334677777776665555544443333
No 73
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.52 E-value=1.4e-12 Score=106.83 Aligned_cols=181 Identities=15% Similarity=0.060 Sum_probs=106.5
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHH-H
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLS-R 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~-~ 102 (255)
.+++++++|+.+...+..++.........+..+.+.+..|.+..... ....++.+++.++.|+++||+|||+.+. .
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~ 293 (402)
T TIGR00897 214 AATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWF 293 (402)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Confidence 45668888875544333332222222122223445556666554432 2344678889999999999999888764 3
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhh
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVS 182 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 182 (255)
+.+.+++..+.+...... ...+.+..++..++.+++.+...+ ......|..| +.|+++.|+.+....+++.++
T Consensus 294 ~~l~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~g 366 (402)
T TIGR00897 294 GGVGCGIFTLALYYIPQH-----FGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLA 366 (402)
T ss_pred HHHHHHHHHHHHHHHHHc-----cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHH
Confidence 333333333333222100 012334444444445554444433 3455677655 579999999999999999999
Q ss_pred hhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 183 PLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 183 p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
|.+.+. ...++...+++.+++.+++.++..++
T Consensus 367 p~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 367 PAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 998883 33455566777777777766665554
No 74
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.52 E-value=8.9e-14 Score=108.09 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhh
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYI 153 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
...++..++.++.+|.++||+|||+++.++.+..+++..+.+.. .+...+++..++.+.+-+ ..++..+
T Consensus 75 SsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S----------~~F~afv~aR~l~Gi~kg-nl~v~rA 143 (451)
T KOG2615|consen 75 SSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS----------RNFAAFVLARFLGGIFKG-NLSVIRA 143 (451)
T ss_pred hHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHhhhhccC-chHHHHH
Confidence 44567889999999999999999999999999888876666655 355344444777776554 4488999
Q ss_pred hhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh
Q 045196 154 YCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 154 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
+++|+++++.|+.+++.......+|-++||.+.++
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgy 178 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGY 178 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhH
Confidence 99999999999999999999999999999999984
No 75
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.52 E-value=3.2e-13 Score=113.37 Aligned_cols=131 Identities=17% Similarity=0.115 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCch--------HHHHHHHHHHHHHhhhhh
Q 045196 78 LMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSW--------PQLIIEGVGFMAASTAFD 149 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 149 (255)
++..+|.+++|+++||+|||+++.++.++.+++.+++.+.+ +++ .+++..++.+++.++.++
T Consensus 68 l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~----------~~~~~g~~a~~~l~~~R~l~G~g~g~~~~ 137 (490)
T PRK10642 68 LIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIP----------SYATIGIWAPILLLLCKMAQGFSVGGEYT 137 (490)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcc----------cHHHHHHHHHHHHHHHHHHHHhHhHhhHH
Confidence 56778999999999999999999999999999998888873 332 367778888888888889
Q ss_pred hhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh----------hhcCCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 150 VMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV----------GRMSPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 150 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
....++.|.+|++.|+...++......+|..+++.+... ...+|++.|++.+.+.+++.++...+||+.
T Consensus 138 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp 216 (490)
T PRK10642 138 GASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETP 216 (490)
T ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 999999999999999999999887777777666644321 135677788776655554444434567763
No 76
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.51 E-value=1.6e-12 Score=108.64 Aligned_cols=142 Identities=13% Similarity=0.059 Sum_probs=109.2
Q ss_pred cCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHH
Q 045196 65 LNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGF 141 (255)
Q Consensus 65 ~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (255)
++.+....+. ...++..++.++.|+++||+|||+.+..+.++.++..++..+.. ..+.+..++..++.+
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~~~G 142 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA--------GGGIALVVFCRVIQG 142 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH--------HcCchHHHHHHHHHH
Confidence 4444444333 34457788999999999999999999998888777776654431 124556777788888
Q ss_pred HHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hh-cCCCchhHHHHHHHHHHHHHHHHh
Q 045196 142 MAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GR-MSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 142 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
++.+...+....+++|.+|+++|+++.++......+|.+++|.+.+. .. .+|+..|++.+++.++..++.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred HhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHH
Confidence 88888889999999999999999999999999999999999998873 33 378888888887776665555443
No 77
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.51 E-value=4.8e-13 Score=110.81 Aligned_cols=148 Identities=12% Similarity=0.056 Sum_probs=104.2
Q ss_pred ccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHH
Q 045196 64 NLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVG 140 (255)
Q Consensus 64 ~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (255)
+.+.+..... ....++..++.++.|+++||+|||+.+.++.++.+++.++...... ...+.+...+..++.
T Consensus 55 ~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~l~ 128 (438)
T TIGR00712 55 EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPW------ATSSIAIMFVLLFLN 128 (438)
T ss_pred HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcccc------ccchHHHHHHHHHHH
Confidence 3465544433 3344577788999999999999999999888887777666544310 012334444555666
Q ss_pred HHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--h-hcCCCchhHHHHHHHHHHHHHH-HHhcc
Q 045196 141 FMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--G-RMSPSLSFLVFGALSIFSGVLS-LWLPE 216 (255)
Q Consensus 141 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~-~~~~e 216 (255)
+++.+..++.....+.|.+|+++|+++.++.+....+++.++|.+.+. . ..+|+..|++.++++++..+.. +++||
T Consensus 129 g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 129 GWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred HHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 666666667778888999999999999999999999999888876552 2 2467778888777777655443 45566
Q ss_pred C
Q 045196 217 T 217 (255)
Q Consensus 217 ~ 217 (255)
+
T Consensus 209 ~ 209 (438)
T TIGR00712 209 T 209 (438)
T ss_pred C
Confidence 4
No 78
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.50 E-value=1.2e-12 Score=105.79 Aligned_cols=149 Identities=14% Similarity=0.017 Sum_probs=103.2
Q ss_pred eeecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 60 LNVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 60 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
.+.++++.+......+ ..++..++.+..|+++||+|||+++........... ...... .+.+.+++.
T Consensus 16 ~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~-~~~~~~---------~~~~~l~~~ 85 (368)
T TIGR00903 16 LVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAA-GRLLDP---------FNYEWLLAC 85 (368)
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-HHHHHh---------ccHHHHHHH
Confidence 3344556555444333 345677889999999999999987665544333332 222221 356677777
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH-HH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS-LW 213 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~ 213 (255)
+++.+.+.+. ........+|.+|+++|++++++.+....+|..++|.+... ...+|+..|++.+++.++..++. ++
T Consensus 86 R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~ 164 (368)
T TIGR00903 86 QLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAA 164 (368)
T ss_pred HHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777664 45566667899999999999999999999999999888774 34578888888777776655544 56
Q ss_pred hccCCC
Q 045196 214 LPETKN 219 (255)
Q Consensus 214 ~~e~~~ 219 (255)
+||+.+
T Consensus 165 lp~~p~ 170 (368)
T TIGR00903 165 LPALPF 170 (368)
T ss_pred cCCCCC
Confidence 787643
No 79
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.50 E-value=3.1e-12 Score=104.50 Aligned_cols=149 Identities=11% Similarity=0.049 Sum_probs=97.0
Q ss_pred ecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHH
Q 045196 62 VGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEG 138 (255)
Q Consensus 62 ~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (255)
+.+.+.+.... ..+.+++.+++.++.+++.||+|||+.+.++..+..+..+++.... .+.... ..+
T Consensus 232 l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~--~~~ 300 (393)
T PRK09705 232 YIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP---------LQLPVL--WAM 300 (393)
T ss_pred HHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc---------chHHHH--HHH
Confidence 34456554433 3445678889999999999999999988888776666655444331 111111 122
Q ss_pred HHHHHHhhhhhhhhhhhcccc-chhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcC-CCchhHHHHHHHHHHHHHH-HH
Q 045196 139 VGFMAASTAFDVMYIYCVELF-PTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMS-PSLSFLVFGALSIFSGVLS-LW 213 (255)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~ 213 (255)
+.+++.+...+.......+.+ |++.|++..++.+..+.+++.++|.+.++ ...+ +...+.+.+.++++..++. .+
T Consensus 301 l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK09705 301 VCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRF 380 (393)
T ss_pred HHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 334444555566666666766 46789999999999999999999999984 2222 4445555555555554443 45
Q ss_pred hccCCCCC
Q 045196 214 LPETKNAP 221 (255)
Q Consensus 214 ~~e~~~~~ 221 (255)
.||++++.
T Consensus 381 ~~~~~~~~ 388 (393)
T PRK09705 381 APARFPQL 388 (393)
T ss_pred ccccccch
Confidence 58877654
No 80
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.50 E-value=1.2e-12 Score=106.55 Aligned_cols=180 Identities=15% Similarity=0.185 Sum_probs=103.5
Q ss_pred ccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeee-cccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhH--
Q 045196 25 DNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNV-GNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRL-- 98 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~-- 98 (255)
..+.++++++++.+...+..+.............+.+. +..+.+.... .....++.+++.++.++++||+|||+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 284 (399)
T TIGR00893 205 KYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKS 284 (399)
T ss_pred ccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 34567788887755444443333333332222223333 3345543332 33445677889999999999999986
Q ss_pred HHHHHHHH--HHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHH
Q 045196 99 LLSRSAYV--AGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALM 176 (255)
Q Consensus 99 ~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 176 (255)
........ ..+.......... .....+..+....+..++. +..+..+.+.+|.+|++.|+++.|+.+....
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 357 (399)
T TIGR00893 285 LVFARKTAIIAGLVLSLLMFATN------YVNIPYAALALVALGFFGL-GAGAIGWALISDNAPGNIAGLTGGLINSLGN 357 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhc------cchhHHHHHHHHHHHHhch-hhhhHHHHHHHhhcChhHHHHHHHHHHHHHH
Confidence 21111111 1111111111110 0012233333333333333 3678899999999999999999999999999
Q ss_pred HhhhhhhhHHHhh--hcC-CCchhHHHHHHHHHHHHHH
Q 045196 177 LGASVSPLLVVVG--RMS-PSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 177 ~g~~~~p~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~ 211 (255)
+|+.++|.+.+.. ..+ +...+.+.+++.+++.+..
T Consensus 358 ~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 358 LGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 9999999998842 233 4556666666666655544
No 81
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.50 E-value=8.4e-13 Score=107.99 Aligned_cols=138 Identities=16% Similarity=0.105 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhh
Q 045196 76 NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYC 155 (255)
Q Consensus 76 ~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
..++.++|+++.++++||+|||..+.++.++..++.+++.+.. .......+++..++.+...+........++
T Consensus 69 f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~-------~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 69 FFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSK-------SAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHH-------HhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 4468899999999999999999999988888777777666542 124666888889999988888889999999
Q ss_pred ccccchhcHHHHHHHHHHHHHHhhhhhhhHHH---hhh-cCCCchhHHHHHHHHHHHHHHHHhccCCCC
Q 045196 156 VELFPTNVRNIAVSFLRQALMLGASVSPLLVV---VGR-MSPSLSFLVFGALSIFSGVLSLWLPETKNA 220 (255)
Q Consensus 156 ~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (255)
.|+.|++.||....+......+|..++..+.. +.. ..|.+.+....+..++..+...++||+.+.
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~ 210 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKY 210 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcch
Confidence 99999999999888888888888877755543 111 224444455556666666667788998654
No 82
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.50 E-value=4.7e-12 Score=106.22 Aligned_cols=157 Identities=15% Similarity=0.025 Sum_probs=111.1
Q ss_pred hhheeeeecccCchhHHHHHHHHHHH-HHHHHHHHHHHhhc-----chhHH-HHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 045196 55 YYGIQLNVGNLNFNLYFSVALNALME-IPAVVIGTVLLSFT-----NRRLL-LSRSAYVAGSASILCTLFSNNNNNKGKG 127 (255)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~l~dr~-----grr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (255)
....+.|....|.+......+..++. .++.++++.++||+ |||+. +..+.+..+++...+.+.. +.
T Consensus 32 ~~~l~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~-------~~ 104 (491)
T PRK11010 32 SGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLE-------PG 104 (491)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcC-------Cc
Confidence 33445666666777655555433322 26889999999999 99885 5566666666666665542 22
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh-hh--cCCCchhHHHHHHH
Q 045196 128 GGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-GR--MSPSLSFLVFGALS 204 (255)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-~~--~~~~~~~~~~~~~~ 204 (255)
.+.+...+..++.+++.+...+...++..|.+|+++|+++.++......+|.++++.+... .. .+|+..|++.+++.
T Consensus 105 ~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ 184 (491)
T PRK11010 105 TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALL 184 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHH
Confidence 3455555556666666667778889999999999999999999999999999988877763 22 36778888888777
Q ss_pred HHHHHHHHHhccCC
Q 045196 205 IFSGVLSLWLPETK 218 (255)
Q Consensus 205 ~~~~~~~~~~~e~~ 218 (255)
++..+..++.||+.
T Consensus 185 ll~~l~~~~~~e~~ 198 (491)
T PRK11010 185 IPCIIATLLAPEPT 198 (491)
T ss_pred HHHHHHHHhcCCCc
Confidence 77665555677754
No 83
>PRK09952 shikimate transporter; Provisional
Probab=99.49 E-value=1.8e-12 Score=107.40 Aligned_cols=131 Identities=17% Similarity=0.100 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCch--------HHHHHHHHHHHHHhhhhh
Q 045196 78 LMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSW--------PQLIIEGVGFMAASTAFD 149 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 149 (255)
++..+|.++.|+++||+|||+.+.++..+.+++.++..+.+ +.. .+++.+++.+++.++.++
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~~R~l~G~~~g~~~~ 144 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLP----------SFSTIGWWAPVLLVTLRAIQGFAVGGEWG 144 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCC----------cHHHHHHHHHHHHHHHHHHHHhhhcccHH
Confidence 34567889999999999999999999999999888888763 332 466678888888888888
Q ss_pred hhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh----------hhcCCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 150 VMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV----------GRMSPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 150 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
....++.|.+|++.|+...+.......+|..+++.+... ...+|+.+|++.++..++...+....||++
T Consensus 145 ~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~ 223 (438)
T PRK09952 145 GAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESA 223 (438)
T ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 889999999999999999888888777887776654431 134677778776665544332223446653
No 84
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.48 E-value=3.6e-14 Score=112.97 Aligned_cols=139 Identities=14% Similarity=0.158 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhh
Q 045196 71 FSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDV 150 (255)
Q Consensus 71 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
..+....++..+.++++|++.||++||+++.++..+..++.++..+. ..+|.+++++.+.+.+-+...++
T Consensus 72 ll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs----------~~Fwq~~l~R~~vGiGeAs~~~i 141 (493)
T KOG1330|consen 72 LLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS----------NHFWQVLLCRGFVGIGEASYSPI 141 (493)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH----------HHHHHHHHHHHHhccchhhhccc
Confidence 34445567788899999999999999999999999999999988887 57889999999999999999999
Q ss_pred hhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh---hhcCCCchhHHHHHHHHHHHHHHH-HhccCCC
Q 045196 151 MYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV---GRMSPSLSFLVFGALSIFSGVLSL-WLPETKN 219 (255)
Q Consensus 151 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~ 219 (255)
...+++|.||...|++++++.++...+|+.+|-..... ...+|++.|.+.+++.+++.++.+ +.+|.++
T Consensus 142 a~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 142 APSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred chhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 99999999999999999999999998888776544432 223488899999999988877765 4455443
No 85
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.48 E-value=5.6e-12 Score=104.36 Aligned_cols=142 Identities=13% Similarity=-0.105 Sum_probs=84.1
Q ss_pred cccCchhHHHH---HHHHHHHHHHHHHHHHHHhhc--ch-hHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 63 GNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFT--NR-RLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 63 ~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~--gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
...|.+..... .+..++.+++.++.|+++||+ ++ |...........+....+.... ..+.......
T Consensus 272 ~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 343 (434)
T PRK11663 272 ETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP--------FASYVMQAAC 343 (434)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc--------cccHHHHHHH
Confidence 44566544333 344567888999999999998 33 3332222222222222222221 1122222222
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSL 212 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
.+..+++..+..........|.+|++.|+++.|+.++.+.+|++++|.+.+. ...++...|.+.+++.+++.+..+
T Consensus 344 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 344 FFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 2222322222223445677899999999999999999999999999998884 344566677777777766655443
No 86
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.48 E-value=4.7e-12 Score=103.49 Aligned_cols=143 Identities=13% Similarity=0.089 Sum_probs=94.2
Q ss_pred cccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHH
Q 045196 63 GNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGV 139 (255)
Q Consensus 63 ~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (255)
+.++.+......+ ..++.+++.++.|+++||+|||+.+..+.....+....+... ++.+..++..++
T Consensus 245 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~~l 314 (393)
T PRK15011 245 NELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA----------HSPAILLGLQLL 314 (393)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH----------hhHHHHHHHHHH
Confidence 3455554433322 234556788999999999999998777665554443333222 234444444444
Q ss_pred HHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHhcc
Q 045196 140 GFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWLPE 216 (255)
Q Consensus 140 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e 216 (255)
.+++.+...+....+..|.+|++ |+++.++.+...++|..++|.+.+. ...++...+.+.+++.+++.+..+++||
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 44444444456667788999864 8999999988889999999999884 3345666677667777776666666665
No 87
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.48 E-value=4.2e-12 Score=104.21 Aligned_cols=132 Identities=18% Similarity=0.178 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhh
Q 045196 75 LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIY 154 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
+..+...++.++.|+++||+|||+.+..+....++..+++... ++.+..++..++.+++. +..+....+
T Consensus 62 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~g~~~-~~~~~~~~~ 130 (408)
T PRK09874 62 ITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA----------QNIWQFLILRALLGLLG-GFVPNANAL 130 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH----------hhHHHHHHHHHHHHHhh-hhHHhHHHH
Confidence 3445677888999999999999999999888877777666554 35565555666665543 345667778
Q ss_pred hccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH-HHhccC
Q 045196 155 CVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS-LWLPET 217 (255)
Q Consensus 155 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~ 217 (255)
+.|.+|+++|+++.++.+....+|.+++|.+.+. ...+++..+++.+++.+++.+.. +++||.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 131 IATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 8899999999999999999989999999998874 33466667777777666665544 345554
No 88
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.47 E-value=4.1e-12 Score=104.22 Aligned_cols=186 Identities=11% Similarity=-0.012 Sum_probs=115.0
Q ss_pred ccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeec-ccCc-hhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 25 DNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVG-NLNF-NLYFSVALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
..+..+.+|+|+.|...++.++.+.......+.++++.. .+.. +......+..+...++.+++|+++||+|+|+++.+
T Consensus 242 ~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~ 321 (462)
T PRK15034 242 IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLI 321 (462)
T ss_pred HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHH
Confidence 345677889988665544444433322212222222222 2211 11222333445677788999999999999999998
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccch---------------------
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPT--------------------- 161 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~--------------------- 161 (255)
+...+.++........... ...+.+...+..+...++.+......+.+++.++|+
T Consensus 322 ~~i~~~i~~~~~~l~lp~~----~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~ 397 (462)
T PRK15034 322 NFIFMAIFSALLFLTLPGT----GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAV 397 (462)
T ss_pred HHHHHHHHHHHHHHHhccc----cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHH
Confidence 8887777665443332100 012233444444444455666777888899999985
Q ss_pred hcHHHHHHHHHHHHHHhhhhhhhHHHhh--h-cCCCchhHHHHHHHHHHHHHHHHh
Q 045196 162 NVRNIAVSFLRQALMLGASVSPLLVVVG--R-MSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 162 ~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
++-|.+.|+....+.+|+++.|.+.+.. . .++...++.+.+..++|.++.++.
T Consensus 398 ~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 398 TETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 1467888999999999999999887732 2 334456777888888887776554
No 89
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.47 E-value=3.3e-12 Score=105.82 Aligned_cols=153 Identities=11% Similarity=0.019 Sum_probs=113.3
Q ss_pred ccCchh---HHHHHHHHHHHHHHHHHHHHHHhhcchh--HHHHHHHHHHHHHHHHHHH--hcccCCCCCCCCCchHHHHH
Q 045196 64 NLNFNL---YFSVALNALMEIPAVVIGTVLLSFTNRR--LLLSRSAYVAGSASILCTL--FSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 64 ~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~grr--~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 136 (255)
.++.+. ....++..+.+++|++++|++.||+|.| ++++++.....+..+...+ ... .....+.+.+.++
T Consensus 311 ~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~----~~g~~~~~~f~~~ 386 (477)
T PF11700_consen 311 VLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPS----FFGLKSPWEFWVL 386 (477)
T ss_pred hcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhc----ccCcccHHHHHHH
Confidence 455543 3344556678899999999999999988 7777776665444333322 110 0012456677777
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh---hhcCCCchhHHHHHHHHHHHHHHHH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV---GRMSPSLSFLVFGALSIFSGVLSLW 213 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (255)
.++.+.+.++.++..-++.+|+.|+++.+..+|+....+...++++|++.+. ...+.+..++...++.++++++.++
T Consensus 387 a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 387 AVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 8888888999999999999999999999999999999999999999999984 2234566777777777777777777
Q ss_pred hccCCCC
Q 045196 214 LPETKNA 220 (255)
Q Consensus 214 ~~e~~~~ 220 (255)
++..+++
T Consensus 467 v~~~~g~ 473 (477)
T PF11700_consen 467 VDVEKGR 473 (477)
T ss_pred ccchhhh
Confidence 7765544
No 90
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.47 E-value=1.8e-12 Score=108.42 Aligned_cols=161 Identities=16% Similarity=0.112 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHHHhhheeee-----ecccCchhHHHHHHHH---HHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHH
Q 045196 39 KRLIMVMTAGFGVGFVYYGIQLN-----VGNLNFNLYFSVALNA---LMEIPAVVIGTVLLSF-TNRRLLLSRSAYVAGS 109 (255)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr-~grr~~l~~~~~~~~~ 109 (255)
+.++..+...+...+.+|++..+ .+.+|.+......+.+ ....+..+++|+++|| +|||++++++.++.++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 34555555556566666655422 2345655444333322 2344456789999999 9999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhc--HHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 110 ASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNV--RNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
..+++.+.. ......++...+.+.+.+...+...+++.|.+|++. |+.++++.+...++|.+++|.+.+
T Consensus 94 g~~~~~~~~---------~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g 164 (489)
T PRK10207 94 GYFMTGMSL---------LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP 164 (489)
T ss_pred HHHHHHHhc---------cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 888877652 222233345556666677777888999999998874 577899999999999999998888
Q ss_pred h--hhcCCCchhHHHHHHHHHHH
Q 045196 188 V--GRMSPSLSFLVFGALSIFSG 208 (255)
Q Consensus 188 ~--~~~~~~~~~~~~~~~~~~~~ 208 (255)
+ ...+|++.|++.++..+++.
T Consensus 165 ~l~~~~gw~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 165 VIADKFGYSVTYNLCGAGLIIAL 187 (489)
T ss_pred HHHHhhChHHHHHHHHHHHHHHH
Confidence 4 34467777777544333333
No 91
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.47 E-value=1.5e-11 Score=100.21 Aligned_cols=173 Identities=16% Similarity=0.035 Sum_probs=105.3
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRS 103 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~ 103 (255)
++++.++++..+......+...+.....+...+.+.++.+.+..... .+..++.+++.+..|++.||+|||+.+..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~ 271 (381)
T PRK03633 192 SIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQ 271 (381)
T ss_pred CHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHH
Confidence 45677777764432222222222222222233445555566544332 234457778999999999999999988877
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhh
Q 045196 104 AYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSP 183 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p 183 (255)
..+..+..+... . ... .....++.+.+.....+...+++.|..|++.++...+..+....+|++++|
T Consensus 272 ~~~~~~~~~~~~-~-----------~~~-~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp 338 (381)
T PRK03633 272 VFVVILGSIAML-S-----------QAA-MAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGP 338 (381)
T ss_pred HHHHHHHHHHHh-h-----------hHH-HHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776665544332 1 111 112222333333445678888888999988888778888888889999999
Q ss_pred hHHHh--hhcCCCchhHHHHHHHHHHHHHHH
Q 045196 184 LLVVV--GRMSPSLSFLVFGALSIFSGVLSL 212 (255)
Q Consensus 184 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
.+.++ +..++...|.+.+++.++..+..+
T Consensus 339 ~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 339 SFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 99984 344566666666666655543333
No 92
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.47 E-value=2e-12 Score=105.81 Aligned_cols=152 Identities=10% Similarity=-0.090 Sum_probs=99.6
Q ss_pred HHHHHhhheeee-ecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 045196 50 GVGFVYYGIQLN-VGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKG 125 (255)
Q Consensus 50 ~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (255)
...+....++.+ .+.++.+......+ ..++..++.++.|+++||+|||+++..+.++.++..+.+....... +.
T Consensus 30 ~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~--~~ 107 (399)
T PRK05122 30 TIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLA--AW 107 (399)
T ss_pred HHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhh--cc
Confidence 333433344443 34567665554444 3456778889999999999999999999887776655443321000 00
Q ss_pred CCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHH
Q 045196 126 KGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGAL 203 (255)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~ 203 (255)
...+.+.+++..++.+.+.+...+....+..|.+|.++|+++.++......+|..++|.+.+. ...++...+++.+++
T Consensus 108 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~ 187 (399)
T PRK05122 108 PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLL 187 (399)
T ss_pred chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 001233456666777777777777888888999999999999999888888888888888773 333444444444333
No 93
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.47 E-value=1.7e-12 Score=104.01 Aligned_cols=142 Identities=18% Similarity=0.195 Sum_probs=108.4
Q ss_pred eeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 60 LNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 60 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
.+..+.+.+..... ....++..++.++.|+++||+|||+.+.++..+..+..+..... ++.+..++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 93 (352)
T cd06174 24 LLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA----------SSLWLLLVG 93 (352)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh----------ccHHHHHHH
Confidence 34444555544333 33446778899999999999999999999999888888877665 466677777
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
.++.+++.+...+...++..|.+|+++|+++.++.+....+|..++|.+.+. ...+++..+.+.+++.+++.+..
T Consensus 94 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 94 RFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL 170 (352)
T ss_pred HHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 7777877777888999999999999999999999999999999999998873 33345666666665555544433
No 94
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.46 E-value=6.9e-13 Score=110.77 Aligned_cols=148 Identities=9% Similarity=-0.048 Sum_probs=104.9
Q ss_pred eeecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 60 LNVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 60 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
.+.++++.+....+.+ ..++..++.++.|+++||+|||+++.++.++.++..+++...... ...+.+.+++.
T Consensus 54 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~ 128 (467)
T PRK09556 54 DMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGS-----GSVSLGLMIAL 128 (467)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhc-----ccchHHHHHHH
Confidence 3445666665444433 345667889999999999999999988888777776665543100 01356677777
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hh---cCCCchhHHHHHHHHHHHHHH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GR---MSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~ 211 (255)
.++.+++.+...+....+++|.+|+++|+++.|+......+|.++++.+..+ .. .++...|.+.+++.++..++.
T Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~ 208 (467)
T PRK09556 129 WALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIG 208 (467)
T ss_pred HHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHH
Confidence 7888887777788888999999999999999999998888888888776642 11 134555666666655544443
Q ss_pred H
Q 045196 212 L 212 (255)
Q Consensus 212 ~ 212 (255)
+
T Consensus 209 ~ 209 (467)
T PRK09556 209 L 209 (467)
T ss_pred H
Confidence 3
No 95
>PRK03545 putative arabinose transporter; Provisional
Probab=99.46 E-value=8.5e-12 Score=101.87 Aligned_cols=178 Identities=14% Similarity=0.036 Sum_probs=106.9
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHH-HHhhheeeeecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVG-FVYYGIQLNVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
.+.++++|++.++......++...... ...+..++.....+.+.... ....+++.+++.++.++++||+|||....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~ 275 (390)
T PRK03545 196 KSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI 275 (390)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Confidence 346678888875544433333222222 11222222333345443332 33455678889999999999999887543
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhh
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 181 (255)
+..+..+......... .+.+..++..++.+++.....+.....+.+..| +.|+++.|+.+....+|..+
T Consensus 276 -~~~~~~~~~~~l~~~~---------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~ 344 (390)
T PRK03545 276 -AIALLLVCLLLLLPAA---------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGA 344 (390)
T ss_pred -HHHHHHHHHHHHHHHh---------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHH
Confidence 4333333333332221 334444445555555555445556677778777 57899999999999999999
Q ss_pred hhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 182 SPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 182 ~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
+|.+.+. ...+....+...+++.+++.++....
T Consensus 345 G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 345 GALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 9999884 44556666777777776666554433
No 96
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.46 E-value=7.5e-12 Score=104.84 Aligned_cols=180 Identities=13% Similarity=0.066 Sum_probs=127.4
Q ss_pred HhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 045196 30 SLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYV 106 (255)
Q Consensus 30 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~ 106 (255)
..+|+|.+++......+..++..+...+...++.+...++....++ ..+-.++.++++|.++||++||++++.+-++
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~ 84 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLL 84 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Confidence 4578888777666666666666555555555555555555444333 3445567889999999999999999998887
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHH
Q 045196 107 AGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLV 186 (255)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~ 186 (255)
.++..+.+.+.... ...+.|.++++.++.+.+.....|...++++|+.|.+....+.++.....++..++||.+.
T Consensus 85 ~~~~~~~L~~l~~~-----~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalg 159 (524)
T PF05977_consen 85 RALVALLLAVLAFF-----GLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALG 159 (524)
T ss_pred HHHHHHHHHHHHHh-----CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHH
Confidence 76655544433211 1245677777778888888888899999999999999999999999999999999999998
Q ss_pred Hh--hhcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 187 VV--GRMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 187 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
|. ...+....|.+-++..++..+.+...
T Consensus 160 G~Lva~~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 160 GILVAFFGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 83 33455566666665555544444444
No 97
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.46 E-value=8.9e-13 Score=106.72 Aligned_cols=144 Identities=14% Similarity=0.152 Sum_probs=102.8
Q ss_pred ecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHH
Q 045196 62 VGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEG 138 (255)
Q Consensus 62 ~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (255)
.++++.+..... ....++..++.++.|+++||+|||+++.++.++.++..+...+. ++.+..++..+
T Consensus 30 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 99 (377)
T TIGR00890 30 GRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA----------DSLAALYLTYG 99 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH----------HHHHHHHHHHH
Confidence 344565544433 34456778899999999999999999999998888888777776 45666666666
Q ss_pred HHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH-h-hhcCCCchhHHHHHHHHHHHHHHH-Hhc
Q 045196 139 VGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV-V-GRMSPSLSFLVFGALSIFSGVLSL-WLP 215 (255)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 215 (255)
+.+++.+..++.......|.+| ++|+++.++......+|..+++.+.+ . ...+++..|++.+++.++..+..+ +++
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 178 (377)
T TIGR00890 100 LASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIG 178 (377)
T ss_pred HHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhee
Confidence 7777666666667777888887 56999999999888888776544443 2 334566777777777766655443 444
Q ss_pred c
Q 045196 216 E 216 (255)
Q Consensus 216 e 216 (255)
+
T Consensus 179 ~ 179 (377)
T TIGR00890 179 Y 179 (377)
T ss_pred c
Confidence 3
No 98
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.46 E-value=8.7e-12 Score=101.52 Aligned_cols=127 Identities=10% Similarity=0.023 Sum_probs=99.4
Q ss_pred HHHhhheeeeecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC
Q 045196 52 GFVYYGIQLNVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGG 128 (255)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (255)
.......+.+..+++.+....+.+ ..++..++.++.|+++||+|||+.+..+.++.++..+...+. +
T Consensus 23 ~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~----------~ 92 (381)
T PRK03633 23 AVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM----------V 92 (381)
T ss_pred hhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------c
Confidence 344444556666777765554444 345778899999999999999999999998888887777665 4
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh
Q 045196 129 GSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
+.+..++..++.+++.+...+.......+..|++.|++++++......+|..++|.+.+.
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 93 GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 667777777777777777667777777788888999999999999999999999998874
No 99
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.45 E-value=8e-12 Score=101.02 Aligned_cols=116 Identities=14% Similarity=0.076 Sum_probs=86.6
Q ss_pred eecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC-CchHHHHH
Q 045196 61 NVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGG-GSWPQLII 136 (255)
Q Consensus 61 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 136 (255)
..+.++.+......+ ..++..++.++.|+++||+|||+.++++.++.++..+++.+. . +.+..++.
T Consensus 28 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~ 97 (366)
T TIGR00886 28 IKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA----------VQSYSVLLLL 97 (366)
T ss_pred HHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH----------hhhHHHHHHH
Confidence 334567665544333 445778899999999999999999999999888888777766 3 56666666
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
.++.+++.+ ..+....++.|.+|+++|+++.++......+|..+++.+.+
T Consensus 98 ~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 147 (366)
T TIGR00886 98 RLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMP 147 (366)
T ss_pred HHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHH
Confidence 666665533 44667788999999999999999988777777666655543
No 100
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.45 E-value=2.2e-11 Score=101.85 Aligned_cols=157 Identities=8% Similarity=0.023 Sum_probs=94.0
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHH---HHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYF---SVALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
..++.+++||.++..+...++.+...........++......+... ...+.+++.+++.++.++++||+|||+.+.+
T Consensus 222 ~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~ 301 (473)
T PRK10429 222 DIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAG 301 (473)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 3455666887755544444444443332222222333322222222 2223346778888999999999999999988
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccc-----hhc--HHHHHHHHHHHH
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFP-----TNV--RNIAVSFLRQAL 175 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-----~~~--r~~~~~~~~~~~ 175 (255)
+..+..+..+........ ...+.+..++..++.+++.+...+..+++++|..+ +.. .|...|...+..
T Consensus 302 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~ 376 (473)
T PRK10429 302 ASIFPVLSCGVLLLMGLA-----APHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVV 376 (473)
T ss_pred HHHHHHHHHHHHHHHhcc-----CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHH
Confidence 877655554443322000 11334444555555666677777888999999955 333 345667778888
Q ss_pred HHhhhhhhhHHH
Q 045196 176 MLGASVSPLLVV 187 (255)
Q Consensus 176 ~~g~~~~p~~~~ 187 (255)
.++..+++.+.+
T Consensus 377 K~~~al~~~i~g 388 (473)
T PRK10429 377 KGGSAFAAFFIG 388 (473)
T ss_pred HHHHHHHHHHHH
Confidence 888888888776
No 101
>PRK10504 putative transporter; Provisional
Probab=99.45 E-value=6.3e-12 Score=105.16 Aligned_cols=151 Identities=17% Similarity=0.147 Sum_probs=100.0
Q ss_pred HhhcChhHHHHHHHHHHHHHHHHHHhhheeeeec-ccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 045196 30 SLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVG-NLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAY 105 (255)
Q Consensus 30 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~ 105 (255)
+++|++.++..+...++..+......+..+++.+ ..|.+....... ..++.+++.++.+++.||+|||+++..+..
T Consensus 256 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~ 335 (471)
T PRK10504 256 KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTL 335 (471)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 4788887655544444444444443444444444 356554443322 334556667889999999999999988888
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhH
Q 045196 106 VAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLL 185 (255)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~ 185 (255)
+.++..+++.+.. ...+.+......++.+++.+...+....+..+.+|++.|+.+.++.++...+|..++|.+
T Consensus 336 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i 408 (471)
T PRK10504 336 GLALVSLLFMLVA-------LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTI 408 (471)
T ss_pred HHHHHHHHHHhcc-------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHH
Confidence 7777766655442 112222223333444455555667778888899999999999999999999999988888
Q ss_pred HH
Q 045196 186 VV 187 (255)
Q Consensus 186 ~~ 187 (255)
.+
T Consensus 409 ~g 410 (471)
T PRK10504 409 AG 410 (471)
T ss_pred HH
Confidence 76
No 102
>PRK12382 putative transporter; Provisional
Probab=99.45 E-value=5.9e-12 Score=102.87 Aligned_cols=125 Identities=10% Similarity=-0.068 Sum_probs=88.4
Q ss_pred ecccCchhHHHHHHHH---HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHH
Q 045196 62 VGNLNFNLYFSVALNA---LMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEG 138 (255)
Q Consensus 62 ~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (255)
.+++|.+......+.+ +...++.++.|+++||+|||++++++.+.+.++.+......... .....+.+..++..+
T Consensus 43 ~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~r~ 120 (392)
T PRK12382 43 HHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILP--VSAPFKFALLVVGRL 120 (392)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 3567777655554443 46677889999999999999999988877665544322211000 000123455666677
Q ss_pred HHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh
Q 045196 139 VGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
+.+.+.+...+...+++.|.+|+++|+++.++......++..++|.+.+.
T Consensus 121 l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~ 170 (392)
T PRK12382 121 ILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLL 170 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHH
Confidence 77776666667777888999999999999999988888888899988774
No 103
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.44 E-value=9.7e-12 Score=104.33 Aligned_cols=186 Identities=12% Similarity=0.040 Sum_probs=112.2
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHh-hheeeeecccCchhHHHHHHH----HHHHHHHHHHHHHHHhhcchhHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVY-YGIQLNVGNLNFNLYFSVALN----ALMEIPAVVIGTVLLSFTNRRLLL 100 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~l~dr~grr~~l 100 (255)
.++++++++++.+......+.........+ +..+++....|.+......+. .++.++|.+++|+++||+|||+.+
T Consensus 213 ~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l 292 (491)
T PRK11010 213 APLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRAL 292 (491)
T ss_pred HHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 357778877664443333332222222222 222333345666654443332 346778999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhh
Q 045196 101 SRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGAS 180 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 180 (255)
.++.++.++..+....... ...+.+......++..++.+...+..+++..++.|.+.+++..++.+....+|..
T Consensus 293 ~i~~~l~~l~~l~~~~l~~------~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~ 366 (491)
T PRK11010 293 MIFGILQGVSNAGYWLLSI------TDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRV 366 (491)
T ss_pred HHHHHHHHHHHHHHHHHHh------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHH
Confidence 7666554544433222110 0122333333333433334444466788888999999999999999999999988
Q ss_pred hhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHhccC
Q 045196 181 VSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWLPET 217 (255)
Q Consensus 181 ~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (255)
+++.+.+. ...++...|.+.+++++++.+....++++
T Consensus 367 ~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 367 YVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77777763 33456666777777777776666666554
No 104
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.44 E-value=3.6e-12 Score=102.77 Aligned_cols=154 Identities=9% Similarity=-0.066 Sum_probs=106.7
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHh-hheeeeecc-cCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVY-YGIQLNVGN-LNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLL 100 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l 100 (255)
..++.++++|..+......+...+...... ...+.+..+ ++.+.... ....+++.+++.++.+++.||+|||+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 280 (365)
T TIGR00900 201 EGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALM 280 (365)
T ss_pred hHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH
Confidence 345667788775554444443333332222 333444443 45443332 3344567788999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhh
Q 045196 101 SRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGAS 180 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 180 (255)
..+..+.++..+.+.+.. .+.+...+..++.+++.+...+....+..|.+|++.|+++.|+.+....+++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 351 (365)
T TIGR00900 281 TGAIFVIGLAILVVGLTP---------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWP 351 (365)
T ss_pred HHHHHHHHHHHHHHHhhc---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 887777766666655541 12455555666667777777788899999999999999999999999999999
Q ss_pred hhhhHHHh
Q 045196 181 VSPLLVVV 188 (255)
Q Consensus 181 ~~p~~~~~ 188 (255)
++|.+.+.
T Consensus 352 ~g~~~~g~ 359 (365)
T TIGR00900 352 LGLILAGP 359 (365)
T ss_pred HHHHHHHH
Confidence 99998874
No 105
>PRK09848 glucuronide transporter; Provisional
Probab=99.44 E-value=2.4e-11 Score=101.05 Aligned_cols=154 Identities=10% Similarity=0.026 Sum_probs=102.1
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecc-cCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGN-LNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
..++.++++|.++...+..++.+..........+++.+. ++.+....... ..++.+++.++.+++.||+|+|+.+.
T Consensus 219 ~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~ 298 (448)
T PRK09848 219 ISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFL 298 (448)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 457789999986665555554444433333333444433 34443332221 13456678899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchh-------cHHHHHHHHHHH
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTN-------VRNIAVSFLRQA 174 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-------~r~~~~~~~~~~ 174 (255)
++..++++..+.+.+. +..+.+...+..++.+++.+...+..+++.+|..|.+ .+|...|+.++.
T Consensus 299 ~g~~~~~i~~~~~~~~--------~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~ 370 (448)
T PRK09848 299 IGALLGTCGYLLFFWV--------SVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFT 370 (448)
T ss_pred HHHHHHHHHHHHHHHc--------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHH
Confidence 9888777766665543 1234444444455566667777788889999988754 358888999988
Q ss_pred HHHhhhhhhhHHH
Q 045196 175 LMLGASVSPLLVV 187 (255)
Q Consensus 175 ~~~g~~~~p~~~~ 187 (255)
..+|..+++.+.+
T Consensus 371 ~klg~aig~~i~g 383 (448)
T PRK09848 371 RKCGQAIGGSIPA 383 (448)
T ss_pred HHHHHHHHHHHHH
Confidence 8899988888776
No 106
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.44 E-value=2.8e-11 Score=98.32 Aligned_cols=153 Identities=11% Similarity=0.078 Sum_probs=107.0
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHH----HHHhhheeeeecccCchhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGV----GFVYYGIQLNVGNLNFNLYFSVALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
++..+++|+.++...+..++.+... +...|+..+.+..................+++.++...+++|+|+|+++.+
T Consensus 228 ~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~ 307 (467)
T COG2211 228 SFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLI 307 (467)
T ss_pred HHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHH
Confidence 3456889988666655444444333 233444444444433444444444555667778999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccc-----hhcH--HHHHHHHHHHH
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFP-----TNVR--NIAVSFLRQAL 175 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-----~~~r--~~~~~~~~~~~ 175 (255)
+.++.++..+.+.+.. .++.+..++..++.+++.+...++.|++++|... +..| |...+...++.
T Consensus 308 ~~~~~~i~~~~~~f~~--------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~ 379 (467)
T COG2211 308 GLLLLAVGYLLLYFTP--------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFR 379 (467)
T ss_pred HHHHHHHHHHHHHhhc--------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHH
Confidence 9999999888888873 3455666667778888888899999999999854 3334 45567777777
Q ss_pred HHhhhhhhhHHH
Q 045196 176 MLGASVSPLLVV 187 (255)
Q Consensus 176 ~~g~~~~p~~~~ 187 (255)
.+|.+++..+.+
T Consensus 380 K~g~ala~~~~g 391 (467)
T COG2211 380 KLGLALAGFIPG 391 (467)
T ss_pred HHHHHHHHHHHH
Confidence 788877776665
No 107
>PRK12382 putative transporter; Provisional
Probab=99.43 E-value=1.6e-11 Score=100.31 Aligned_cols=128 Identities=15% Similarity=0.036 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhh
Q 045196 75 LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIY 154 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
..+++.+++.++.|++.||+|||+.+..+..+.++..+++... .+.+..++..++.+++.+...+.....
T Consensus 257 ~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~g~~~~~~~~~~~~~ 326 (392)
T PRK12382 257 AFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA----------PTAWVALAGAALTGAGCSLIFPALGVE 326 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc----------ccHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3455677889999999999999999888887777766655443 344444445555555555566777778
Q ss_pred hccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHH
Q 045196 155 CVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSL 212 (255)
Q Consensus 155 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
..|.+|++.|+++.|+.+....+|..++|.+.+. ...++...+.+.+++.+++.++.+
T Consensus 327 ~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 327 VVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999998884 445677778877777776665544
No 108
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.43 E-value=3.9e-12 Score=117.18 Aligned_cols=108 Identities=13% Similarity=-0.011 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhh
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYI 153 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
.+..++.+++.+++|+++||+|||++++++.++.++..++..+.. ...+.+.+++..++.+++.+...+...+
T Consensus 54 ~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 126 (1146)
T PRK08633 54 ALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAY-------YLGWFWLAFAVTFLLGAQSAIYSPAKYG 126 (1146)
T ss_pred HHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHH-------HHccHHHHHHHHHHHHHHHHhhchHHHh
Confidence 344556778899999999999999999888766555554433321 0134667777777888888888889999
Q ss_pred hhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh
Q 045196 154 YCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 154 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
+++|++|.+.|+.++|+......+|.+++|.+.++
T Consensus 127 ~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~ 161 (1146)
T PRK08633 127 IIPELVGKENLSRANGLLEAFTIVAILAGTALFSF 161 (1146)
T ss_pred hhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998874
No 109
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.43 E-value=7e-12 Score=115.41 Aligned_cols=181 Identities=9% Similarity=-0.009 Sum_probs=111.7
Q ss_pred HHhhcChhHHHHHHHHHHHHHHHHHHhhhee-----eeecccCch----hHHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Q 045196 29 ESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQ-----LNVGNLNFN----LYFSVALNALMEIPAVVIGTVLLSFTNRRLL 99 (255)
Q Consensus 29 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 99 (255)
.++++++.+++.++..++..+...+....+. ......+.+ ..+...+..+..++..+++|+++||+|||++
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~ 84 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence 3467777655554444444444333222211 111111111 1222333445667888999999999999997
Q ss_pred HHHHHHHHHH--HHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHH
Q 045196 100 LSRSAYVAGS--ASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALML 177 (255)
Q Consensus 100 l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 177 (255)
+.....+..+ ...+..+.. .+.+.++++.++.+.+.+...+...+++.+++|.+.|+.++|+.++...+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~---------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~i 155 (1140)
T PRK06814 85 AKILKFAEIGIAALAIYGFHL---------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFI 155 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHH
Confidence 6432222111 111222221 46777888888888888888899999999999999999999999999999
Q ss_pred hhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 178 GASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 178 g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
|.+++|.+.++ ...++...|...+++.+++.++.+++|+++
T Consensus 156 g~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 156 AILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 99999999984 333444444333333333444445566543
No 110
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.42 E-value=2e-11 Score=100.16 Aligned_cols=122 Identities=4% Similarity=-0.099 Sum_probs=95.1
Q ss_pred eeeecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHH
Q 045196 59 QLNVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLI 135 (255)
Q Consensus 59 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (255)
+.+.+.++.+......+ ..++..++.+..|++.||+|||+.+.++..++++..++..... ..++.+..++
T Consensus 27 ~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~-------~~~~~~~~l~ 99 (410)
T TIGR00885 27 PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAA-------EIMNYTLFLV 99 (410)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH-------hhccHHHHHH
Confidence 44455667665544433 4467788999999999999999999999998888876654331 1135666677
Q ss_pred HHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 136 IEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
..++.+.+.+...+....++.++.|++.|++..++.+....+|..++|.+..
T Consensus 100 ~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~ 151 (410)
T TIGR00885 100 GLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQ 151 (410)
T ss_pred HHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778888888888888888999999999999999999999999999988776
No 111
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.42 E-value=5.9e-12 Score=102.52 Aligned_cols=108 Identities=17% Similarity=0.122 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH-HHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASI-LCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
....+..+++.++.++++||+|||+.+.....+..+..+ ...... ...+.+......++.+++.+...+...
T Consensus 262 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~ 334 (394)
T TIGR00883 262 MLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL-------DSGSFTLFFFLVLGLALIGGMYTGPMG 334 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh-------cCCchHHHHHHHHHHHHHHHHHhhhHH
Confidence 334567788889999999999999987765554443332 222111 112444444455555666666778889
Q ss_pred hhhccccchhcHHHHHHHHHHH-HHHhhhhhhhHHHh
Q 045196 153 IYCVELFPTNVRNIAVSFLRQA-LMLGASVSPLLVVV 188 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~-~~~g~~~~p~~~~~ 188 (255)
++++|.+|++.|+++.++.+.. ..+|+.++|.+.+.
T Consensus 335 ~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~ 371 (394)
T TIGR00883 335 SFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAA 371 (394)
T ss_pred HHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHH
Confidence 9999999999999999986544 45788899998884
No 112
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.42 E-value=3.1e-12 Score=106.46 Aligned_cols=171 Identities=13% Similarity=0.069 Sum_probs=102.7
Q ss_pred HhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhc--chhHHHHHH-
Q 045196 30 SLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFT--NRRLLLSRS- 103 (255)
Q Consensus 30 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~--grr~~l~~~- 103 (255)
++++++.++......++..+........++.+..+.+.+..... .+.+++.+++.++.++++||. ++|+...++
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 315 (455)
T TIGR00892 236 SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSF 315 (455)
T ss_pred HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHH
Confidence 46677765433333332222222222222333344555543333 334556677888899999973 344333332
Q ss_pred -HHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhh
Q 045196 104 -AYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVS 182 (255)
Q Consensus 104 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 182 (255)
.+..++..++.... .+.+..++..++.+++.+...+..++++.|.+|++.++++.|+.+....+|++++
T Consensus 316 ~~~~~~l~~ll~~~~----------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig 385 (455)
T TIGR00892 316 ALLFNGLTHLLCALA----------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIG 385 (455)
T ss_pred HHHHHHHHHHHHHHh----------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcc
Confidence 22222333333222 3455555556666666666778888999999999999999999999999999999
Q ss_pred hhHHHh--hhc-CCCchhHHHHHHHHHHHHH
Q 045196 183 PLLVVV--GRM-SPSLSFLVFGALSIFSGVL 210 (255)
Q Consensus 183 p~~~~~--~~~-~~~~~~~~~~~~~~~~~~~ 210 (255)
|.+.+. ... ++...|.+.+++.+++.+.
T Consensus 386 p~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 386 PPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred ccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 999984 222 3556677766666655443
No 113
>PRK15075 citrate-proton symporter; Provisional
Probab=99.42 E-value=6.5e-12 Score=103.97 Aligned_cols=110 Identities=14% Similarity=0.122 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCch--------HHHHHHHHHHHHHhhhhhhhh
Q 045196 81 IPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSW--------PQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 81 ~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 152 (255)
.++.++.|+++||+|||+.++.+..+..+..+++.+. ++.+ .+++.+++.+++.+...+...
T Consensus 70 ~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~ 139 (434)
T PRK15075 70 PLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFV----------PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVS 139 (434)
T ss_pred hhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhC----------CcHHHHHHHHHHHHHHHHHHhhccccccHHHHH
Confidence 4678999999999999999999999888888887776 2332 345667777777777777788
Q ss_pred hhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh----------hhcCCCchhHHH
Q 045196 153 IYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV----------GRMSPSLSFLVF 200 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~----------~~~~~~~~~~~~ 200 (255)
.+++|.+|++.|+++.++.....++|..+++.+.+. ...+|+.+|++.
T Consensus 140 ~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~ 197 (434)
T PRK15075 140 VYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIG 197 (434)
T ss_pred HHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHH
Confidence 999999999999999999888877776666655442 234566666653
No 114
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.42 E-value=2.3e-11 Score=99.36 Aligned_cols=180 Identities=12% Similarity=0.034 Sum_probs=107.2
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHHHHHH----HHHHHHHHHHHHHHhhcchhHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSVALNA----LMEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
.++++++|+|..+......++........+-..+.+..+.|.+......+.. ...+++.++.|++.||+|+|+.+.
T Consensus 199 ~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~ 278 (390)
T TIGR02718 199 ASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFI 278 (390)
T ss_pred HHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4577888888755444444433333322222233455567777665554433 244567889999999999999988
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccch-hcHHHHHHHHHHHHHHhhh
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPT-NVRNIAVSFLRQALMLGAS 180 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~~ 180 (255)
++..+.++..+......... .....+.......+..+..+...+.......+..++ +.+++.+++.+....+|..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~ 354 (390)
T TIGR02718 279 LGVGLAGSLALLWFAQAAFW----LAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGEL 354 (390)
T ss_pred HHHHHHHHHHHHHHHHHHcc----cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHH
Confidence 77665533322222111000 001222223333333444555556666666666665 8899999999999999999
Q ss_pred hhhhHHHh--hhcCCCchhHHHHHHHHHHHH
Q 045196 181 VSPLLVVV--GRMSPSLSFLVFGALSIFSGV 209 (255)
Q Consensus 181 ~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~ 209 (255)
++|.+.+. ...++...|...+++.+++.+
T Consensus 355 ~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 355 IASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999884 334555666666665555543
No 115
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.42 E-value=1.7e-11 Score=98.15 Aligned_cols=131 Identities=24% Similarity=0.247 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhH-HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhh
Q 045196 73 VALNALMEIPAVVIGTVLLSFTNRRL-LLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVM 151 (255)
Q Consensus 73 ~~~~~~~~~~~~~~~g~l~dr~grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (255)
.....++..++.++.+++.||+|||+ .+..+..+..++.+..... .+.+...+..++.+++.+...+..
T Consensus 217 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~ 286 (352)
T cd06174 217 LSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA----------PSLALLLVALLLLGFGLGFAFPAL 286 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh----------ccHHHHHHHHHHHHHHHhccchhH
Confidence 34455678889999999999999999 8888888888887777665 345566666777777778888999
Q ss_pred hhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHH
Q 045196 152 YIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLW 213 (255)
Q Consensus 152 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (255)
..+..|..|++.|++..++.+....++..++|.+.+. ...++...+.+.+++.+++.+..++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 287 LTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999999999999999884 3456777788888887777665443
No 116
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.41 E-value=4.5e-11 Score=98.17 Aligned_cols=115 Identities=16% Similarity=0.030 Sum_probs=84.2
Q ss_pred ccCchhHHHHHHH---HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHH
Q 045196 64 NLNFNLYFSVALN---ALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVG 140 (255)
Q Consensus 64 ~~~~~~~~~~~~~---~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (255)
+++.+......+. .+...++.+..|++.||+|.|+++.++.++.++..+...+.... ..++++.+++..++.
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~-----~~~s~~~lli~r~l~ 138 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQN-----PNTPFGIFIVIALLC 138 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc-----cCCCHHHHHHHHHHH
Confidence 4666655444333 34555677888999999999999999999888888777764100 113566777777777
Q ss_pred HHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhh
Q 045196 141 FMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPL 184 (255)
Q Consensus 141 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~ 184 (255)
+++ +..++.....+++.+|+++||++.|+....+++|..++++
T Consensus 139 Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~ 181 (462)
T PRK15034 139 GFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQL 181 (462)
T ss_pred HHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHH
Confidence 775 5677889999999999999999999997666666654433
No 117
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.41 E-value=3e-11 Score=99.07 Aligned_cols=161 Identities=12% Similarity=0.105 Sum_probs=112.8
Q ss_pred HHHhhheeeeecccCchhHHHHHHHHH-HHHHHHHHHHHHHhhc-----chhH-HHHHHHHHHHHHHHHHHHhcccCCCC
Q 045196 52 GFVYYGIQLNVGNLNFNLYFSVALNAL-MEIPAVVIGTVLLSFT-----NRRL-LLSRSAYVAGSASILCTLFSNNNNNK 124 (255)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~-----grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~ 124 (255)
.+.....+.|+.+.|.+......+..+ .-.+..+++|+++||+ |||+ .+.++..+++++...+.+..
T Consensus 16 ~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~------ 89 (402)
T PRK11902 16 ALTSGTLQAWMTVEGLDIQTIGFFSLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCP------ 89 (402)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcC------
Confidence 444455667888888887766555433 2256789999999999 7765 67777777777777666552
Q ss_pred CCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh-hh--cCCCchhHHHH
Q 045196 125 GKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-GR--MSPSLSFLVFG 201 (255)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-~~--~~~~~~~~~~~ 201 (255)
+..+.+...+..++.+++.....+...++++|.+|+++|+++.++......+|.++++.+... .. .+|+..|++.+
T Consensus 90 -~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a 168 (402)
T PRK11902 90 -PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMA 168 (402)
T ss_pred -ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHH
Confidence 112344444444455555666778889999999999999999999998888888888776653 22 36777888877
Q ss_pred HHHHHHHHHHHHhccCCC
Q 045196 202 ALSIFSGVLSLWLPETKN 219 (255)
Q Consensus 202 ~~~~~~~~~~~~~~e~~~ 219 (255)
++.+++.+..++.||++.
T Consensus 169 ~~~l~~~l~~~~~~e~~~ 186 (402)
T PRK11902 169 GLMLAGALTTLWAPEPEV 186 (402)
T ss_pred HHHHHHHHHHHhcCCCcc
Confidence 776666555556676543
No 118
>PRK15075 citrate-proton symporter; Provisional
Probab=99.41 E-value=2.7e-11 Score=100.28 Aligned_cols=117 Identities=15% Similarity=0.045 Sum_probs=74.0
Q ss_pred cCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH-HHHhcccCCCCCCCCCchHHHHHHHHH
Q 045196 65 LNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASIL-CTLFSNNNNNKGKGGGSWPQLIIEGVG 140 (255)
Q Consensus 65 ~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (255)
.|.+.... ..+..++.+++.++.|+++||+|||+.++.+..+..+..+. ..... ...+........++.
T Consensus 269 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 341 (434)
T PRK15075 269 LHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLV-------AAPSFARMLAVELWL 341 (434)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH-------cCCchHHHHHHHHHH
Confidence 45543332 33445677889999999999999999887765544332221 11111 012222222222333
Q ss_pred HHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHH-hhhhhhhHHHh
Q 045196 141 FMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALML-GASVSPLLVVV 188 (255)
Q Consensus 141 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~~~p~~~~~ 188 (255)
+++.+...+..+.+..|.+|++.|+++.++.+..+.. ++.++|.+.++
T Consensus 342 ~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~ 390 (434)
T PRK15075 342 SFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTW 390 (434)
T ss_pred HHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHH
Confidence 3444555566778899999999999999998766654 57788988874
No 119
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.40 E-value=1.5e-11 Score=100.57 Aligned_cols=137 Identities=12% Similarity=0.049 Sum_probs=101.9
Q ss_pred eeecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHH
Q 045196 60 LNVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLII 136 (255)
Q Consensus 60 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (255)
....+++.+......+ ..++..++.++.|+++||+|||+++..+..+.+++.+...+. ++.+..++.
T Consensus 34 ~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a----------~~~~~ll~~ 103 (393)
T PRK09705 34 QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY----------PQSALLLSS 103 (393)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC----------cchHHHHHH
Confidence 3444566665444433 335677889999999999999999999999999999988887 466777778
Q ss_pred HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh-hh--cCCCchhHHHHHHHHHH
Q 045196 137 EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-GR--MSPSLSFLVFGALSIFS 207 (255)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-~~--~~~~~~~~~~~~~~~~~ 207 (255)
.++.+++.+...+....++.+.+| ++|+.++++......+|..+++.+.+. .. .+|+..+..+++..++.
T Consensus 104 r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 104 ALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 888888888877888888999997 679999999988877777777776663 21 13445555444444333
No 120
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.40 E-value=2.6e-11 Score=99.45 Aligned_cols=135 Identities=10% Similarity=-0.002 Sum_probs=91.7
Q ss_pred HHHHHHHhhheeeeecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 045196 48 GFGVGFVYYGIQLNVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNK 124 (255)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 124 (255)
.......+...+.+.++++.+...... ...++..++.++.|+++||+|||+++..+..+.+++.++......
T Consensus 26 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~----- 100 (402)
T TIGR00897 26 MTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGL----- 100 (402)
T ss_pred HHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc-----
Confidence 333333333344455666766544433 445677889999999999999999999988888776654432100
Q ss_pred CCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhh-hhhhhHHHh
Q 045196 125 GKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGA-SVSPLLVVV 188 (255)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~-~~~p~~~~~ 188 (255)
...+.+..++..++.+++.+...+....++.+.+|+++|+++.|+.+....+|. .++|.+.++
T Consensus 101 -~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~ 164 (402)
T TIGR00897 101 -GHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSY 164 (402)
T ss_pred -cCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 012445555556666655555555666778899999999999999999988886 578887663
No 121
>PTZ00207 hypothetical protein; Provisional
Probab=99.40 E-value=4e-11 Score=101.18 Aligned_cols=145 Identities=12% Similarity=0.126 Sum_probs=99.2
Q ss_pred ecccCchhHHHHHHHHHHHH--HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHH
Q 045196 62 VGNLNFNLYFSVALNALMEI--PAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGV 139 (255)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~--~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (255)
...++.+......+.+++.. .+.+++|++.||+|||+++.++.++.++..++..+.... ....+.+.+.+..++
T Consensus 54 ~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~----~i~~s~~~l~l~r~l 129 (591)
T PTZ00207 54 QARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQE----VIEGSVVRLSVYNGL 129 (591)
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcc----cccCcHHHHHHHHHH
Confidence 44556665444444333222 345578999999999999999999999988887775200 001356666667777
Q ss_pred HHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhh-hhhHHHhhhcCCCchhHHHHHHHHHHHHHH
Q 045196 140 GFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASV-SPLLVVVGRMSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 140 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
.+.+.+...+.....+.++|| +.||.+.|+......+|+++ +|+...+...++...+++.+++.++..++.
T Consensus 130 ~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~ 201 (591)
T PTZ00207 130 MTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILA 201 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 777776666777788889997 67999999999999999875 555554443445556666666666554443
No 122
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.40 E-value=2.5e-11 Score=98.45 Aligned_cols=147 Identities=18% Similarity=0.143 Sum_probs=96.4
Q ss_pred ecccCchhHHHHHHHH---HHHHHHHHHHHHHHhhcchhHHHHH-HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHH
Q 045196 62 VGNLNFNLYFSVALNA---LMEIPAVVIGTVLLSFTNRRLLLSR-SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIE 137 (255)
Q Consensus 62 ~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr~grr~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
.++++.+......+.+ +...+..++.|+++||+|||+.++. +.....+..++..+. ++.+..++..
T Consensus 25 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~~ 94 (375)
T TIGR00899 25 SEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN----------RNYFLLLVLG 94 (375)
T ss_pred HcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc----------chHHHHHHHH
Confidence 3456776655544433 4566778899999999999887655 444444444454444 3555554444
Q ss_pred HHHHHHHhhhhhhhhhhhccccchhcHHHH--HHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH-H
Q 045196 138 GVGFMAASTAFDVMYIYCVELFPTNVRNIA--VSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS-L 212 (255)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~--~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~ 212 (255)
++.+.+.+...+....+..|..|++.|+.+ .+.......+|..++|.+.+. ...+++..|++.+.+.++..++. +
T Consensus 95 ~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 95 VLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 444444455567777888888887777654 567777778888999988874 34567778888877766665554 4
Q ss_pred HhccCC
Q 045196 213 WLPETK 218 (255)
Q Consensus 213 ~~~e~~ 218 (255)
++||.+
T Consensus 175 ~~~~~~ 180 (375)
T TIGR00899 175 FLPSYP 180 (375)
T ss_pred hCCCcc
Confidence 467644
No 123
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.39 E-value=7e-11 Score=96.24 Aligned_cols=172 Identities=11% Similarity=-0.096 Sum_probs=107.6
Q ss_pred ccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHH
Q 045196 25 DNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
..++++++|+|.++......++........+...+.+..+.|.+...... +..++.++..++.+++.||+|+|+.+.
T Consensus 195 ~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~ 274 (382)
T PRK11128 195 WPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLL 274 (382)
T ss_pred cchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 35688999998866655544444443322222223333455655433332 334566777889999999999999998
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHH-HHhhh
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQAL-MLGAS 180 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~g~~ 180 (255)
++....++..+.+... ++.+..++..++.+++.+...+....+..+. +++.+++..++.+... .+|..
T Consensus 275 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ 343 (382)
T PRK11128 275 LSAICGVVRWGLMGST----------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIA 343 (382)
T ss_pred HHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHH
Confidence 8888777766655544 4566666666666766666667777777776 4555788888876443 56668
Q ss_pred hhhhHHHhhhcC-CCchhHHHHHHHHHH
Q 045196 181 VSPLLVVVGRMS-PSLSFLVFGALSIFS 207 (255)
Q Consensus 181 ~~p~~~~~~~~~-~~~~~~~~~~~~~~~ 207 (255)
++|.+.|..... ....++..+++.+++
T Consensus 344 ig~~i~G~l~~~~g~~~~~~~~~~~~~~ 371 (382)
T PRK11128 344 IMTVLSGFLYQHLGAGVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 899988843221 123444445444444
No 124
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.39 E-value=1.2e-11 Score=101.48 Aligned_cols=128 Identities=13% Similarity=0.023 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhh
Q 045196 76 NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYC 155 (255)
Q Consensus 76 ~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
.+++.+++.++.|+++||+|||+.+..+..+..+..+..... .+.+...+..++.+++.+...+....+.
T Consensus 267 ~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 336 (408)
T PRK09874 267 PGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV----------QTPLQLGILRFLLGAADGALLPAVQTLL 336 (408)
T ss_pred HHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh----------ccHHHHHHHHHHHHhhhHhhHHHHHHHH
Confidence 345666788889999999999999888877666655554443 3445555555566666666677778888
Q ss_pred ccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHH
Q 045196 156 VELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLW 213 (255)
Q Consensus 156 ~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (255)
.+..|.+.|++..++.+....+|..++|.+.+. ...++...|.+.+++.+++.++.++
T Consensus 337 ~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 337 VYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999884 3345667788777777776665543
No 125
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.39 E-value=2.3e-11 Score=99.57 Aligned_cols=175 Identities=8% Similarity=0.034 Sum_probs=107.3
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeec----ccCchhHH---HHHHHHHHHHHHHHHHHHHHhhcchhH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVG----NLNFNLYF---SVALNALMEIPAVVIGTVLLSFTNRRL 98 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~grr~ 98 (255)
.+.++++|+|.++...+..+.............+.+.+ ..+.+... ...+..+...++.+..+++.||+|||+
T Consensus 206 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~ 285 (396)
T TIGR00882 206 KLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN 285 (396)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 45778888887554444333332222111111111211 11222222 223344566778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHH-HHHHHHH
Q 045196 99 LLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSF-LRQALML 177 (255)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~ 177 (255)
.+.++..+.++...+.... .+.+..+...++.+.+..........+..+..|++.++++.+. .+....+
T Consensus 286 ~l~~~~~l~~l~~~~~~~~----------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~l 355 (396)
T TIGR00882 286 ALLIAGTIMSVRIIGSSFA----------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQL 355 (396)
T ss_pred hHHHHHHHHHHHHHHHHhc----------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHH
Confidence 9988887777765554443 3555555555555555444444556677888888888887766 5677789
Q ss_pred hhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHH
Q 045196 178 GASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVL 210 (255)
Q Consensus 178 g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 210 (255)
|++++|.+.++ ...++...|.+.+++.++..++
T Consensus 356 g~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 356 AMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 99999998884 3346667777777766665544
No 126
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.39 E-value=3.8e-11 Score=100.94 Aligned_cols=167 Identities=13% Similarity=0.039 Sum_probs=105.6
Q ss_pred HhhcChhHHHHHHHHHHHHHHHHHHhhhee-----eeecccCchhHHHHHHHHH---HHHHHHHHHHHHHhh-cchhHHH
Q 045196 30 SLWGTKWAAKRLIMVMTAGFGVGFVYYGIQ-----LNVGNLNFNLYFSVALNAL---MEIPAVVIGTVLLSF-TNRRLLL 100 (255)
Q Consensus 30 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~l~dr-~grr~~l 100 (255)
+.+++|+ .++..+...++..+.+|.+. +..+.+|.+......+.+. ......+++|+++|| +|||+.+
T Consensus 15 ~~~~~p~---~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~ 91 (500)
T PRK09584 15 NAFKQPK---AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI 91 (500)
T ss_pred hhhcCCc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 3455553 23344444444444444433 2234566655443333222 223334689999999 5999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhc--HHHHHHHHHHHHHHh
Q 045196 101 SRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNV--RNIAVSFLRQALMLG 178 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~~~~~~~~~~g 178 (255)
+++.++.++..+++.+.. ...+...+...+.+++.+...+...+++.|.+|++. |..+.++.+...++|
T Consensus 92 ~~g~~~~~ig~~l~~~~~---------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG 162 (500)
T PRK09584 92 MLGAIVLAIGYALVAWSG---------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIG 162 (500)
T ss_pred HHHHHHHHHHHHHHHHhc---------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHH
Confidence 999988888776666541 223334444455566666666788889999998643 456788889999999
Q ss_pred hhhhhhHHHh--hhcCCCchhHHHHHHHHHHH
Q 045196 179 ASVSPLLVVV--GRMSPSLSFLVFGALSIFSG 208 (255)
Q Consensus 179 ~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~ 208 (255)
++++|.+.++ ...+|+..|.+.++..+++.
T Consensus 163 ~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 163 SFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 9999999984 33567777877665444443
No 127
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.39 E-value=1.9e-11 Score=102.63 Aligned_cols=139 Identities=14% Similarity=0.112 Sum_probs=100.0
Q ss_pred ecccCchh--HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHH
Q 045196 62 VGNLNFNL--YFSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGV 139 (255)
Q Consensus 62 ~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (255)
..++|.+. .+......+...++.++.|.++|.+|||..++.+.++..+..+..... ++...++....+
T Consensus 71 ~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA----------~~~~~~iag~~l 140 (599)
T PF06609_consen 71 NADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA----------QNMNTFIAGMVL 140 (599)
T ss_pred HHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC----------CcHHHHHHHHHH
Confidence 34455433 233334456777788999999999999999999999998888887766 455566667777
Q ss_pred HHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH
Q 045196 140 GFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 140 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
.+++.+.. .+....++|+.|.+.|..+.++.....-+....+|.+... ...+|++.|++.++...++++..
T Consensus 141 ~GvgaG~~-~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 141 YGVGAGVQ-ELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred HHHhhHHH-HHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHH
Confidence 77664443 5566778999999999888877765554545566776652 34578999988888777766554
No 128
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.39 E-value=5.8e-12 Score=98.71 Aligned_cols=131 Identities=17% Similarity=0.161 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhh
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYI 153 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
..-++.+++.+++.|.+.||+|+|..++++..++..+.+++++. ++++..++.+.+.+.+.+.......+
T Consensus 113 askA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg----------~sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 113 ASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG----------NSYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred HHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc----------chhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 33457888999999999999999999999999999999999887 67888899999999999999999999
Q ss_pred hhccccchhc-HHHHHHHHHHHHHHhhhhhhhHHH--hhhcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 154 YCVELFPTNV-RNIAVSFLRQALMLGASVSPLLVV--VGRMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 154 ~~~e~~p~~~-r~~~~~~~~~~~~~g~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
++++.||.+. |++++|+.-.+..+|-.++|.+.+ +...+...+|++.++++++...+.+++
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 9999999866 799999999999999999999998 466788999999999999988776655
No 129
>PRK09669 putative symporter YagG; Provisional
Probab=99.39 E-value=9.8e-11 Score=97.28 Aligned_cols=155 Identities=10% Similarity=-0.006 Sum_probs=94.7
Q ss_pred ccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhH---HHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 045196 25 DNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLY---FSVALNALMEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
..++++++|++.++..+...++.............++......+.. .......+..+++.+++++++||+|||+.+.
T Consensus 219 ~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~ 298 (444)
T PRK09669 219 WKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFK 298 (444)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Confidence 4567788999886655444333333332211111122221111111 1112233566678889999999999999988
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccch-------hcHHHHHHHHHHH
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPT-------NVRNIAVSFLRQA 174 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~~~~~~~ 174 (255)
++..+.++..+.+.+. +.++.+..++..++.+++.+...+..+++++|..+. +..|...++.++.
T Consensus 299 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~ 370 (444)
T PRK09669 299 WTIVAFVILSALIFFI--------PPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFA 370 (444)
T ss_pred HHHHHHHHHHHHHHHh--------CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHH
Confidence 8776655444433333 123445555556667777777888999999999863 2235567778888
Q ss_pred HHHhhhhhhhHHH
Q 045196 175 LMLGASVSPLLVV 187 (255)
Q Consensus 175 ~~~g~~~~p~~~~ 187 (255)
..+|..++|.+.+
T Consensus 371 ~klg~alg~~i~g 383 (444)
T PRK09669 371 IKLGLAIGGAVVG 383 (444)
T ss_pred HHHHHHHHHHHHH
Confidence 8899988888776
No 130
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.38 E-value=3.6e-11 Score=97.66 Aligned_cols=147 Identities=18% Similarity=0.160 Sum_probs=113.5
Q ss_pred eeeecccCchhHH-HHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHH
Q 045196 59 QLNVGNLNFNLYF-SVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQL 134 (255)
Q Consensus 59 ~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (255)
+...+.+|.+... .+.+ ...+..++.+++|+++||+|-|+++.++.+..++..++..+. .+.+.+.
T Consensus 50 p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa----------~Sl~~L~ 119 (511)
T TIGR00806 50 PYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG----------TSVWHMQ 119 (511)
T ss_pred HHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH----------HHHHHHH
Confidence 4445566766554 3333 335777889999999999999999999999999999988887 4677888
Q ss_pred HHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh-hhcCCCchh---HHHHHHHHHHHHH
Q 045196 135 IIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-GRMSPSLSF---LVFGALSIFSGVL 210 (255)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-~~~~~~~~~---~~~~~~~~~~~~~ 210 (255)
++.++.+++.+... ....++...+|+++|+++.|+.+....+|.++++.+.++ ...+|.... ++..+...++.++
T Consensus 120 i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~ 198 (511)
T TIGR00806 120 LMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFL 198 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Confidence 88889998888887 999999999999999999999999999999999888874 223443322 2333444455566
Q ss_pred HHHhcc
Q 045196 211 SLWLPE 216 (255)
Q Consensus 211 ~~~~~e 216 (255)
.+++|.
T Consensus 199 a~~LP~ 204 (511)
T TIGR00806 199 ALFLKR 204 (511)
T ss_pred HHhCCC
Confidence 678874
No 131
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.38 E-value=1.5e-10 Score=94.31 Aligned_cols=153 Identities=15% Similarity=0.078 Sum_probs=110.7
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccC-chhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLN-FNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
+..+++|+|+...-++..++........+.....++++.| .+..... .+..+.+++..+..+++..|+|.|+++.+
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~ 278 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLL 278 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 4457899988665555555555455554444556677777 3322222 34456788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHH----HHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHH-HH
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIE----GVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQAL-ML 177 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~ 177 (255)
+.+..++-..++.... ++.+...... .+.+...+........++.+..|++.|++++++.+... .+
T Consensus 279 a~~~~~vR~~l~a~~~---------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Gl 349 (400)
T PF03825_consen 279 ALVAYAVRWLLYAYFS---------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGL 349 (400)
T ss_pred HHHHHHHHHHHHHHhc---------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhH
Confidence 9999998888877762 2333333222 34676677777888899999999999999999987765 58
Q ss_pred hhhhhhhHHHh
Q 045196 178 GASVSPLLVVV 188 (255)
Q Consensus 178 g~~~~p~~~~~ 188 (255)
|+.++.++.|+
T Consensus 350 g~~iG~~igG~ 360 (400)
T PF03825_consen 350 GGAIGSLIGGW 360 (400)
T ss_pred HHHHHHHHHHH
Confidence 88888888884
No 132
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.37 E-value=4.7e-11 Score=96.30 Aligned_cols=154 Identities=10% Similarity=-0.021 Sum_probs=102.0
Q ss_pred heeeeecccCchhHHHHHHHHH--HHHHHHHHHHHHHhhc-----chhHHH-HHHHHHHHHHHHHHHHhcccCCCCCCCC
Q 045196 57 GIQLNVGNLNFNLYFSVALNAL--MEIPAVVIGTVLLSFT-----NRRLLL-SRSAYVAGSASILCTLFSNNNNNKGKGG 128 (255)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~l~dr~-----grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (255)
..+.+.++.|.+.........+ ... ..+++|+++||+ |||+.+ +.+.++.+++...+.+.. +..
T Consensus 10 ~~~~~~~~~g~s~~~~g~~~~~~~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~-------~~~ 81 (356)
T TIGR00901 10 TLPYWLRSKNVSLKTIGFFSLVGLPYS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV-------PST 81 (356)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC-------cch
Confidence 3445566777776665544422 222 388999999998 888864 556666666655555442 112
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcC--------CCchhH
Q 045196 129 GSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMS--------PSLSFL 198 (255)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~--------~~~~~~ 198 (255)
+.+......++.+.+.+...+...++++|.+|+++|+.+.++......+|.+++|.+.+. ...+ |+..|+
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~ 161 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFF 161 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHH
Confidence 333444444445555566667888999999999999999999999889999988888763 2233 666777
Q ss_pred HHHHHHHHHHHHHHH-hccCC
Q 045196 199 VFGALSIFSGVLSLW-LPETK 218 (255)
Q Consensus 199 ~~~~~~~~~~~~~~~-~~e~~ 218 (255)
+.+++.+++.++.++ .||..
T Consensus 162 i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 162 WTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred HHHHHHHHHHHHHHHhccCCC
Confidence 777766665554443 46643
No 133
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.37 E-value=7.5e-12 Score=105.37 Aligned_cols=132 Identities=14% Similarity=0.142 Sum_probs=86.1
Q ss_pred ccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHH
Q 045196 64 NLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVG 140 (255)
Q Consensus 64 ~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (255)
..|.+.... .....++.+++.++.|+++||+|||+.+..+..+..+..++..... ..+.+......++.
T Consensus 305 ~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 376 (496)
T PRK03893 305 DLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIG--------GANVWVLGLLLFFQ 376 (496)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc--------ccHHHHHHHHHHHH
Confidence 556554333 2334567788999999999999999998877766555444333321 12222222223332
Q ss_pred HHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhh--hcCCCchhHHHHHH
Q 045196 141 FMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVVG--RMSPSLSFLVFGAL 203 (255)
Q Consensus 141 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~ 203 (255)
.+...+..+....+++|.+|++.|++++++.+....+|+.++|.+.+.. ..++...+...++.
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 377 QMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHH
Confidence 3333334466778899999999999999999999999999999998843 33444444444433
No 134
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.36 E-value=1.5e-11 Score=100.21 Aligned_cols=134 Identities=18% Similarity=0.148 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC---chHHHHHHHHHHHHHhhhhhhhhhhh
Q 045196 79 MEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGG---SWPQLIIEGVGFMAASTAFDVMYIYC 155 (255)
Q Consensus 79 ~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
...++.++.|+++||+|||+.+..+.++..+..++..+...+. ... .+..++..++.+++.+...+....++
T Consensus 47 ~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~ 121 (394)
T TIGR00883 47 ARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYA-----TIGIWAPILLLLARLIQGFSLGGEWGGAALYL 121 (394)
T ss_pred HhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChh-----hhHHHHHHHHHHHHHHHHhhccccccccHHHh
Confidence 3456889999999999999999999998888877776652000 000 01345556666666666777888999
Q ss_pred ccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh----------hhcCCCchhHHHHHHHHHHHHHHHHhccC
Q 045196 156 VELFPTNVRNIAVSFLRQALMLGASVSPLLVVV----------GRMSPSLSFLVFGALSIFSGVLSLWLPET 217 (255)
Q Consensus 156 ~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (255)
.|.+|+++|+...++......+|.+++|.+... ...+|+..+++.+.+.+++.++....||+
T Consensus 122 ~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 193 (394)
T TIGR00883 122 AEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEET 193 (394)
T ss_pred hhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999998888888888876542 12345556666555555444333445554
No 135
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.36 E-value=2.7e-11 Score=99.92 Aligned_cols=177 Identities=8% Similarity=-0.106 Sum_probs=97.4
Q ss_pred HhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecc-cCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 045196 30 SLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGN-LNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAY 105 (255)
Q Consensus 30 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~ 105 (255)
+.+++|.++...+..++.+++.......++.++.+ +|.+......+ ..+...++.++.|+++||+|||+.++++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~ 84 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIIS 84 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 45666665555444444444444333333444444 77776555444 445777889999999999999999887655
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCch--HHHHHHHHHHHHHhhhhhhhhhhhccccc--hhcHHHHHHHHHHHHHHhhhh
Q 045196 106 VAGSASILCTLFSNNNNNKGKGGGSW--PQLIIEGVGFMAASTAFDVMYIYCVELFP--TNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~r~~~~~~~~~~~~~g~~~ 181 (255)
+.++.......... ...+ .......+.++..+...........++.+ .+.++...|.....+.+|..+
T Consensus 85 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 156 (420)
T PRK09528 85 GLLVLFGPFFIYVF--------APLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWAL 156 (420)
T ss_pred HHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHH
Confidence 54433322111100 0000 01111122222222222222222233322 234566778888888899999
Q ss_pred hhhHHHh-hhcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 182 SPLLVVV-GRMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 182 ~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
+|.+.+. .+.+++..|++.+++++++.++.++.
T Consensus 157 ~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 157 CAFIAGILFNINPQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred HHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhcc
Confidence 9998884 34466777877777766665555444
No 136
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.36 E-value=5.4e-12 Score=108.50 Aligned_cols=159 Identities=11% Similarity=0.132 Sum_probs=111.5
Q ss_pred eeecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc----cCCC---------
Q 045196 60 LNVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSN----NNNN--------- 123 (255)
Q Consensus 60 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~----~~~~--------- 123 (255)
.+.+.++.+....+. ...++..++.++.+++.||+|||+++.++.++.++..++.++... +...
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~ 137 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNL 137 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccc
Confidence 344455655444333 344677888999999999999999999999998888877665421 0000
Q ss_pred ----------C--------------C-CC--C-CchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHH
Q 045196 124 ----------K--------------G-KG--G-GSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQAL 175 (255)
Q Consensus 124 ----------~--------------~-~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 175 (255)
. . .. . ....+++..++.+++.+..+++..+++.|.+|++.|+...++.+...
T Consensus 138 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~ 217 (633)
T TIGR00805 138 SSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIA 217 (633)
T ss_pred cccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHH
Confidence 0 0 00 1 23355677888888888888999999999999999999999999999
Q ss_pred HHhhhhhhhHHHhhh-c-----------------------CCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 176 MLGASVSPLLVVVGR-M-----------------------SPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 176 ~~g~~~~p~~~~~~~-~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
.+|..+++.+.++.. . .|+..|++.+++.++..+.++++|++.
T Consensus 218 ~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~l 284 (633)
T TIGR00805 218 VFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKAL 284 (633)
T ss_pred HhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 999999988876311 0 134456666766666655556667653
No 137
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.36 E-value=2e-11 Score=101.66 Aligned_cols=141 Identities=13% Similarity=0.037 Sum_probs=98.4
Q ss_pred cccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHH-HHH
Q 045196 63 GNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLI-IEG 138 (255)
Q Consensus 63 ~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 138 (255)
..++.+......+ ..++..++.++.|+++||+|||++++.+.++.++..++..+. ++.+..++ ..+
T Consensus 47 ~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~~~~ 116 (455)
T TIGR00892 47 QIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFS----------SNVIELYLTAGF 116 (455)
T ss_pred HHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHh----------hhHHHHHHHHHH
Confidence 3455543333333 233456678899999999999999999888888777776665 34444433 334
Q ss_pred HHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 139 VGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
+.+++.+...+....++.+.+| +.|+++.++.+....+|..++|.+.+. ...+|+..|++.+++.+++.+..+++
T Consensus 117 l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 117 ITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 5555555444566677888886 689999999999999999888887763 44578888888888776665544433
No 138
>TIGR00895 2A0115 benzoate transport.
Probab=99.36 E-value=3.8e-11 Score=97.99 Aligned_cols=118 Identities=17% Similarity=0.137 Sum_probs=84.0
Q ss_pred eecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHH
Q 045196 61 NVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIE 137 (255)
Q Consensus 61 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
+....+.+.... .....++.+++.++.++++||+|||+.+.. ..+.++...++.... .+.+..+...
T Consensus 276 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~~ 345 (398)
T TIGR00895 276 LMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALL-LLLGAVFAVLVGSTL---------FSPTLLLLLG 345 (398)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHH-HHHHHHHHHHHHHHh---------hCHHHHHHHH
Confidence 334445544332 334456778899999999999999954443 333334333333321 3444555556
Q ss_pred HHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh
Q 045196 138 GVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
++.+++.+...+..++++.|.+|++.|+++.|+.+....+|++++|.+.+.
T Consensus 346 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 346 AIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 666777777788899999999999999999999999999999999998863
No 139
>PRK03699 putative transporter; Provisional
Probab=99.36 E-value=6.1e-11 Score=96.98 Aligned_cols=143 Identities=12% Similarity=0.003 Sum_probs=96.9
Q ss_pred cccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHH
Q 045196 63 GNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGV 139 (255)
Q Consensus 63 ~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (255)
+.++.+......+ ..++..++.++.++++||++||+.+.....+..+..+++... .+.+...+..++
T Consensus 234 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 303 (394)
T PRK03699 234 KKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT----------DDPSHLLYAILG 303 (394)
T ss_pred HHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc----------CCchHHHHHHHH
Confidence 4456665444333 345778899999999999999998887776665554444333 233333344455
Q ss_pred HHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHhcc
Q 045196 140 GFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWLPE 216 (255)
Q Consensus 140 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e 216 (255)
.+++.+..++...++..|..|.+ ++...++....+.+|+.++|.+.++ ...++...++..+++++++.+.....++
T Consensus 304 ~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 304 LGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHH
Confidence 55555666677777778877644 5677888888889999999999884 3456667777777777776655555543
No 140
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.35 E-value=1.6e-10 Score=92.15 Aligned_cols=178 Identities=15% Similarity=0.038 Sum_probs=121.8
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeec-ccCchh---HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVG-NLNFNL---YFSVALNALMEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
.+..+++|+|+.+..+....+...++...|.++..++. ..|.+. .......+++.++|+.++|++.|| +.|+.+.
T Consensus 202 ~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~ 280 (394)
T COG2814 202 RTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALI 280 (394)
T ss_pred hHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHH
Confidence 34667899998777666666666555554444433333 344443 444566788999999999999999 8888888
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhh
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 181 (255)
....+.++..+.+.+.. .+.+..++..++.++..............+ .-++.+..+.++.....++|..+
T Consensus 281 ~~~~l~a~~~l~l~~~~---------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~ 350 (394)
T COG2814 281 AALLLLALALLALTFTG---------ASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIAL 350 (394)
T ss_pred HHHHHHHHHHHHHHHhc---------chHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHH
Confidence 88777777777766653 444555555555555555444455556666 33567899999999999999999
Q ss_pred hhhHHHh--hhcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 182 SPLLVVV--GRMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 182 ~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
|..+.+. ...++....++.+++.+++.++.+..
T Consensus 351 GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 351 GAALGGLVLDALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 9888883 44555566677777777776655444
No 141
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.35 E-value=6.9e-11 Score=98.79 Aligned_cols=183 Identities=11% Similarity=0.004 Sum_probs=100.1
Q ss_pred ccchHHhhcChhHHHHHHHHHHHHHHHH-HHhhheeeeecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHH-
Q 045196 25 DNKNESLWGTKWAAKRLIMVMTAGFGVG-FVYYGIQLNVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLL- 99 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~- 99 (255)
+.+++++++++..+...+..+....... +..|...+..+.++.+...... +..++.+++.+++|+++||+++|+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~ 330 (465)
T TIGR00894 251 SLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTL 330 (465)
T ss_pred CCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3468888888875544333333332222 2222222223344555444333 3456778899999999999764421
Q ss_pred -------HHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHH
Q 045196 100 -------LSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLR 172 (255)
Q Consensus 100 -------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 172 (255)
+..+.........++.... ...+.+..+++..+.+++.+...+..+....|..|. .+|.+.++.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~ 402 (465)
T TIGR00894 331 SLTAARKIFNGIGGLGPGIFAYALPY-------LSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITG 402 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHH
Confidence 1111111111111111110 012333334444444444444455566667777776 7999999999
Q ss_pred HHHHHhhhhhhhHHHhh-hc----CCCchhHHHHHHHHHHHHHHHHhc
Q 045196 173 QALMLGASVSPLLVVVG-RM----SPSLSFLVFGALSIFSGVLSLWLP 215 (255)
Q Consensus 173 ~~~~~g~~~~p~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~ 215 (255)
..+.++++++|.+.+.. +. .+...|.+.++..+++.++..+.+
T Consensus 403 ~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 403 LPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred HHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 99999999999998842 21 134456666666666665544443
No 142
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.34 E-value=6.6e-11 Score=98.14 Aligned_cols=180 Identities=14% Similarity=0.058 Sum_probs=95.9
Q ss_pred hhcChhHHHHHHHHHHHHHHH-HHHhhheeeeec-ccCchhHH---HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 045196 31 LWGTKWAAKRLIMVMTAGFGV-GFVYYGIQLNVG-NLNFNLYF---SVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAY 105 (255)
Q Consensus 31 l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~ 105 (255)
+++++..+...+...+..... .+..|. +.++. ..|.+... .....++..+++.+++|+++||+++++....+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 325 (438)
T TIGR00712 247 VLPNKLLWYIAIANVFVYLLRYGVLDWS-PTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVF 325 (438)
T ss_pred HccCchHHHHHHHHHHHHHHHHHHHHhH-HHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHH
Confidence 566766554433333333222 222222 33333 34555433 2334556778899999999999964432222222
Q ss_pred HHHHH--HHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhh-hhh
Q 045196 106 VAGSA--SILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGA-SVS 182 (255)
Q Consensus 106 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~-~~~ 182 (255)
...+. .+...... +..+.+......+..++...+..........|.+|++.|+++.|+.+..+.+++ +++
T Consensus 326 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~g 398 (438)
T TIGR00712 326 FMTLVTIAVIVYWMN-------PAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAA 398 (438)
T ss_pred HHHHHHHHHHHHHhc-------CCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhc
Confidence 22111 11111111 111223222222223322222222334567899999999999999998888875 678
Q ss_pred hhHHHh--hhcCCCchhHHHHHHHHHHHHHH-HHhccCC
Q 045196 183 PLLVVV--GRMSPSLSFLVFGALSIFSGVLS-LWLPETK 218 (255)
Q Consensus 183 p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~ 218 (255)
|.+.+. ...++...+.+.+++.+++.+.. +++||.|
T Consensus 399 p~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 399 SAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred chhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 998884 33456666776666666665554 4557654
No 143
>PRK10133 L-fucose transporter; Provisional
Probab=99.33 E-value=1.8e-10 Score=95.41 Aligned_cols=124 Identities=6% Similarity=-0.097 Sum_probs=93.6
Q ss_pred heeeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHH
Q 045196 57 GIQLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQ 133 (255)
Q Consensus 57 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (255)
..+.+.+.++.+..... ....++..++.++.|+++||+|||+++..+..+.++..+++.... ..++.+..
T Consensus 48 ~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~-------~a~~~~~l 120 (438)
T PRK10133 48 LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAA-------EIMNYTLF 120 (438)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH-------hcCCHHHH
Confidence 34445556676654443 334567888999999999999999999999998888876653211 01466677
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 134 LIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
++..++.+++.+...+....++.|..|.+.|....++.+....+|..++|.+..
T Consensus 121 l~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 121 LVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888888888888888888888877777777889999888899988887754
No 144
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.33 E-value=4.8e-11 Score=94.45 Aligned_cols=185 Identities=17% Similarity=0.087 Sum_probs=123.6
Q ss_pred cchHHhhcChhHHHHHHHHHHHHH-HHHHHhhheeeeecccCchhHHHHHHHHH---HHHHHHHHHHHHHhhcchhHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGF-GVGFVYYGIQLNVGNLNFNLYFSVALNAL---MEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
..++.++++++.|...+.....+- ...+..+...++..+++.+...+..+... ...+..+++|+++||+|.++++.
T Consensus 209 ~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~ 288 (417)
T COG2223 209 AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTL 288 (417)
T ss_pred hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHH
Confidence 457778888775544333333222 22344444445566778777665544444 44456788999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhh
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 181 (255)
+....+.++..+..+...... ...+.+..+...+....+.+......+.+++.++|.+ -|.+.|+....+.+|++.
T Consensus 289 ~~f~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-~G~v~G~vga~G~lGGf~ 364 (417)
T COG2223 289 AVFVGMALAAALLSLFLTGFG---HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-TGAVTGIVGAIGGLGGFF 364 (417)
T ss_pred HHHHHHHHHHHHHHccccccc---cCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-hhHHHHHHHHhccccccc
Confidence 888888888777766531110 0123344444455555567777788999999999874 678899999999999999
Q ss_pred hhhHHHh--hhcC-CCchhHHHHHHHHHHHHHHHHh
Q 045196 182 SPLLVVV--GRMS-PSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 182 ~p~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
-|...+. ...+ +...|.++..+.+++.++.+.+
T Consensus 365 lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 365 LPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred hhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998873 2223 4456777777777777766544
No 145
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.32 E-value=5.9e-11 Score=97.95 Aligned_cols=131 Identities=16% Similarity=0.148 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhh
Q 045196 76 NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYC 155 (255)
Q Consensus 76 ~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
...+.+++.+.+|++.||+|-|+++..+.++.++..++..+.. ....+.+++++++.+++.+..+|....+.
T Consensus 82 ~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa--------~~~~~~~~~~R~lqGl~~g~~~pa~~~i~ 153 (466)
T KOG2532|consen 82 FFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAA--------SIGFYLLLVLRFLQGLGQGVLFPAIGSIL 153 (466)
T ss_pred HHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH--------HhcchhhHHHHHHhHHHHhHHHhhhhcee
Confidence 3468889999999999999999999999999999988887773 24556778899999999999999999999
Q ss_pred ccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--h-hcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 156 VELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--G-RMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 156 ~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
..+.|+++|++..++......+|.+++-.+.++ . ..||...|++.++++++..++++++
T Consensus 154 ~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 154 AKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred eeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998877666664 2 2678899999999988876665443
No 146
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.32 E-value=6.2e-11 Score=97.02 Aligned_cols=116 Identities=16% Similarity=0.094 Sum_probs=82.6
Q ss_pred ccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHH
Q 045196 64 NLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVG 140 (255)
Q Consensus 64 ~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (255)
..+.+.... .....++.+++.++.+++.||+|||+.+.++...+.+..+...... .+.+...+..++.
T Consensus 268 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 338 (405)
T TIGR00891 268 DLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIG---------ANVAVLGLGLFFQ 338 (405)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhC---------CchHHHHHHHHHH
Confidence 345544333 3345567888999999999999999998877765543333322221 2334444443444
Q ss_pred HHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh
Q 045196 141 FMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 141 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
+++..+..+....+++|.+|++.|+++.|+.+....+++.++|.+.+.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~ 386 (405)
T TIGR00891 339 QMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGAL 386 (405)
T ss_pred HHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 444555667788899999999999999999999999999999999984
No 147
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.32 E-value=4e-11 Score=95.00 Aligned_cols=145 Identities=14% Similarity=0.081 Sum_probs=111.1
Q ss_pred ccCch---hHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHH
Q 045196 64 NLNFN---LYFSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVG 140 (255)
Q Consensus 64 ~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (255)
.+|.+ ........++.+++|+++.|++.||+|-|+++.++.++..+.++...+. .......++..+.
T Consensus 282 ~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~----------~~~~~f~i~gll~ 351 (438)
T COG2270 282 DLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL----------EGELDFWILGLLV 351 (438)
T ss_pred HcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc----------cccHHHHHHHHHH
Confidence 45554 3445566778889999999999999999999999888887777766665 2344555566677
Q ss_pred HHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhh---hcCCCchhHHHHHHHHHHHHHHHHhccC
Q 045196 141 FMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVVG---RMSPSLSFLVFGALSIFSGVLSLWLPET 217 (255)
Q Consensus 141 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (255)
+.+.++.++..-++..++.|+++-++.+|+++..++..++++|++.+.. ....+..+.....+.+++.++.++.|+.
T Consensus 352 g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 352 GTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 7778889999999999999999999999999999999999999998842 2234445555556666666666666654
Q ss_pred C
Q 045196 218 K 218 (255)
Q Consensus 218 ~ 218 (255)
+
T Consensus 432 ~ 432 (438)
T COG2270 432 G 432 (438)
T ss_pred C
Confidence 3
No 148
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.31 E-value=3.9e-11 Score=101.35 Aligned_cols=138 Identities=13% Similarity=0.117 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhh
Q 045196 71 FSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDV 150 (255)
Q Consensus 71 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
+......++..++.++.|+++|++|||+.++++.+...+..++..+. .+.+.+++.+++.+++.++...+
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a----------~~~~~l~~GR~l~G~g~G~~~~~ 162 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA----------PSWYQLIVGRILTGLGVGGASVL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHhccchhhhhhc
Confidence 44455667889999999999999999999999999999999999888 47788889999999999998899
Q ss_pred hhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh-hh---cCCCchhHHHHHHHHHHHHHHHHhccCCC
Q 045196 151 MYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-GR---MSPSLSFLVFGALSIFSGVLSLWLPETKN 219 (255)
Q Consensus 151 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (255)
...+.+|+.|++.||.-.++.+....+|..++ ++.+. .. .+|+..+.+..+.+++..+..+++||+.+
T Consensus 163 ~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~ 234 (513)
T KOG0254|consen 163 APVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPR 234 (513)
T ss_pred chhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChH
Confidence 99999999999999999999988888777776 44442 22 25666666666666666666667788644
No 149
>PRK11462 putative transporter; Provisional
Probab=99.31 E-value=5.3e-10 Score=93.15 Aligned_cols=154 Identities=9% Similarity=0.054 Sum_probs=83.6
Q ss_pred ccchHHhhcChhHHHHHHHHHHHHHHH----HHHhhheeeeecccCchhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Q 045196 25 DNKNESLWGTKWAAKRLIMVMTAGFGV----GFVYYGIQLNVGNLNFNLYFSVALNALMEIPAVVIGTVLLSFTNRRLLL 100 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l 100 (255)
+..++.+++|+.++..+...++..... ....|...++...-. ..........+..+++.+++++++||+|+|+.+
T Consensus 218 ~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~ 296 (460)
T PRK11462 218 REDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE-VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF 296 (460)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH
Confidence 345677888887554433332332222 222233333322111 111122334567778899999999999999887
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccc-----hhcHHHHH--HHHHH
Q 045196 101 SRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFP-----TNVRNIAV--SFLRQ 173 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-----~~~r~~~~--~~~~~ 173 (255)
..+..+.++..+++.+.. ..+.+..++..++.+++.+...++.+++.+|... +..|..+. +...+
T Consensus 297 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f 368 (460)
T PRK11462 297 WWTNALLAVISLAMFFVP--------MQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLF 368 (460)
T ss_pred HHHHHHHHHHHHHHHHhc--------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHH
Confidence 655554444333333331 1222233333344455555556677888888766 23455444 44456
Q ss_pred HHHHhhhhhhhHHH
Q 045196 174 ALMLGASVSPLLVV 187 (255)
Q Consensus 174 ~~~~g~~~~p~~~~ 187 (255)
...+|..+++.+.+
T Consensus 369 ~~Klg~alg~~i~g 382 (460)
T PRK11462 369 VLKLGLAFGGALIG 382 (460)
T ss_pred HHHHHHHHHHHHHH
Confidence 77788877777665
No 150
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.31 E-value=1.1e-10 Score=92.53 Aligned_cols=142 Identities=15% Similarity=0.060 Sum_probs=101.1
Q ss_pred cccCchhHHHHHHHH---HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHH
Q 045196 63 GNLNFNLYFSVALNA---LMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGV 139 (255)
Q Consensus 63 ~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (255)
.+++.+..+...+.+ +...+..++.|.+.||+|-|++..++.++..+.++...+... ..+.|.++++.++
T Consensus 42 ~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~-------~~~~~~ll~~gll 114 (417)
T COG2223 42 SDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVT-------YPSTWQLLVIGLL 114 (417)
T ss_pred cccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHcc-------CCchHHHHHHHHH
Confidence 566777666555444 456667899999999999999999999999999988888741 1233555555555
Q ss_pred HHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcC---CCchhHHHHHHHHHHHHHHHH
Q 045196 140 GFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMS---PSLSFLVFGALSIFSGVLSLW 213 (255)
Q Consensus 140 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~ 213 (255)
.++ .++.++....++++.||++++|.+.|+.. .+++|..+..++... ...+ ++....++....++..+..++
T Consensus 115 ~G~-~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~ 191 (417)
T COG2223 115 LGL-AGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWL 191 (417)
T ss_pred Hhc-ccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554 45567899999999999999999999998 888887655554442 2222 555566666666665555443
No 151
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.31 E-value=2.7e-10 Score=92.66 Aligned_cols=176 Identities=12% Similarity=-0.007 Sum_probs=99.7
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeee-cccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNV-GNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
..+++++++++.+...+................+.+. +..+.+..... ....++.+++.++.+++.||+|||+.+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 276 (385)
T TIGR00710 197 ETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLR 276 (385)
T ss_pred HHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3566778887755444333333322222222222222 34555544332 3345677889999999999999999888
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhh
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 181 (255)
.+..+..+..+++...... .....+..+...++.+++.+...+.......|..| +.|+++.++.+.....++.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i 350 (385)
T TIGR00710 277 MGLILFAVSAVLLEITAIL-----GLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAI 350 (385)
T ss_pred HHHHHHHHHHHHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHH
Confidence 8777666655554433100 00122233333444555566666778888888887 56899999998887654444
Q ss_pred hhhHHHhhhcCCCchhHHHHHHHHHH
Q 045196 182 SPLLVVVGRMSPSLSFLVFGALSIFS 207 (255)
Q Consensus 182 ~p~~~~~~~~~~~~~~~~~~~~~~~~ 207 (255)
.+.+.+.........+........+.
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (385)
T TIGR00710 351 VGYLVSLIHGNTAWPMSLSCLVLAVV 376 (385)
T ss_pred HHHHHHhccccChHHHHHHHHHHHHH
Confidence 44444433333344444444433333
No 152
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.31 E-value=1e-10 Score=96.78 Aligned_cols=157 Identities=10% Similarity=0.071 Sum_probs=110.1
Q ss_pred CCccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecc-cCch--hHHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Q 045196 23 NSDNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGN-LNFN--LYFSVALNALMEIPAVVIGTVLLSFTNRRLL 99 (255)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~ 99 (255)
+-+..+++++++|.+++.....++.++..........++.+. .+.+ ......+..+..+++.++.++++||+|+|+.
T Consensus 213 ~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~ 292 (428)
T PF13347_consen 213 SLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV 292 (428)
T ss_pred ccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceee
Confidence 345668889999886665555555545443222222222221 1222 1222234456778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchh-------cHHHHHHHHH
Q 045196 100 LSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTN-------VRNIAVSFLR 172 (255)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-------~r~~~~~~~~ 172 (255)
+..+..+.++..+++.+.. ..+.+..++..++.+++.+..+...+++.+|+.+.+ ..|...|+.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~ 364 (428)
T PF13347_consen 293 YIIGLLLAALGFLLLFFLG--------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNS 364 (428)
T ss_pred hhhhHHHHHHHHHHHHHHH--------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhh
Confidence 9999999988888877762 246677777888888888888899999999998743 3477778888
Q ss_pred HHHHHhhhhhhhHHH
Q 045196 173 QALMLGASVSPLLVV 187 (255)
Q Consensus 173 ~~~~~g~~~~p~~~~ 187 (255)
+...++..+++.+.+
T Consensus 365 ~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 365 FFIKIGQGLAGAIVG 379 (428)
T ss_pred hhhHHHHHHHHHHHH
Confidence 888888888877665
No 153
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.30 E-value=2.5e-10 Score=91.93 Aligned_cols=181 Identities=12% Similarity=0.091 Sum_probs=121.5
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHH-----HhhheeeeecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGF-----VYYGIQLNVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRL 98 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~ 98 (255)
+..+++|.|++|...+........... ..|...+ .++.+.+.... ..+..+.+++...+.+++.+|+|.|+
T Consensus 212 ~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~-f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~ 290 (412)
T PF01306_consen 212 DVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASF-FQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKN 290 (412)
T ss_dssp HHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHh
Confidence 456788999877655544444333222 2222111 22222222222 22334577888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHH-HHHHHH
Q 045196 99 LLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFL-RQALML 177 (255)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~-~~~~~~ 177 (255)
.++++..++++-....++. ++.+.+...-.+.++-.........-|+++.+|++..++...+. +....+
T Consensus 291 ~Lllag~i~~iRi~~~~~~----------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~ 360 (412)
T PF01306_consen 291 LLLLAGVIMAIRIIGSGFA----------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQI 360 (412)
T ss_dssp HHHHHHHHHHHHHHHHHT------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHH
T ss_pred HHHHHHHHHHHHHHHHhhh----------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHH
Confidence 9999999999998888887 57788888888888877777788899999999999999988886 455568
Q ss_pred hhhhhhhHHH--hhhcCCCchhHHHHHHHHHHHHHH-HHhccCC
Q 045196 178 GASVSPLLVV--VGRMSPSLSFLVFGALSIFSGVLS-LWLPETK 218 (255)
Q Consensus 178 g~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~ 218 (255)
+.++.+.+.| ++..+....+++.+.+.++..++. +.+++.+
T Consensus 361 ~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 361 GIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred HHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 8887777777 355556667888877766666554 4455443
No 154
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.30 E-value=2.1e-10 Score=94.15 Aligned_cols=182 Identities=12% Similarity=0.089 Sum_probs=100.4
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHH-hhheeeeecccCchhHHHHHHH---H-HHHHHHHHHHHHHHhhcchhHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFV-YYGIQLNVGNLNFNLYFSVALN---A-LMEIPAVVIGTVLLSFTNRRLLL 100 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~g~l~dr~grr~~l 100 (255)
.++++++|+|.++..+...++........ .+..++.....|.+......+. + ++.+++.++++++.||+|||+.+
T Consensus 200 ~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l 279 (402)
T PRK11902 200 GPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSL 279 (402)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 46778888887554444333333322211 1222233444666655443333 2 34678899999999999999988
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHH----HHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHH
Q 045196 101 SRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEG----VGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALM 176 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 176 (255)
.++..+..+..+.+..... ..++.+..++..+ ..++..+...+....++.+.+|.+.++ +.+....
T Consensus 280 ~~~~~~~~l~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 349 (402)
T PRK11902 280 MLFGVLQAVSNLGYWVLAV------TPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYA----LLSALAS 349 (402)
T ss_pred HHHHHHHHHHHHHHHHHHh------cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HHHHHHH
Confidence 7766665555443322110 0023343333332 333344455667777888888866544 3333444
Q ss_pred HhhhhhhhHHH--hhhcCCCchhHHHHHHHHHHHHHHHHhccC
Q 045196 177 LGASVSPLLVV--VGRMSPSLSFLVFGALSIFSGVLSLWLPET 217 (255)
Q Consensus 177 ~g~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (255)
++...++.+.+ ....++...|.+.+++++++.++....+.+
T Consensus 350 l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 350 VGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 55543444455 244566666777777777766655555443
No 155
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.29 E-value=8.1e-11 Score=98.29 Aligned_cols=177 Identities=15% Similarity=0.081 Sum_probs=128.9
Q ss_pred HHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcc--hhHHHHHH
Q 045196 29 ESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTN--RRLLLSRS 103 (255)
Q Consensus 29 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g--rr~~l~~~ 103 (255)
.++++++.++...+-..+..+.....++.++.+..+.+.+.... ..+.++..+++.++.|++.|+.. ++.+..++
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ 371 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLT 371 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHH
Confidence 57888876554444444444444444444455555666654443 34456788899999999999987 45556677
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhh
Q 045196 104 AYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSP 183 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p 183 (255)
.++++++.+.+.+. .+++.++....+.+++.+...+....++.|+.+.+.-..+.|+...+..++.+++|
T Consensus 372 ll~~gl~~~~~p~~----------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gp 441 (509)
T KOG2504|consen 372 LLIAGLARLFLPFA----------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGP 441 (509)
T ss_pred HHHHHHHHHHHHHh----------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCc
Confidence 77777776565555 46677777788888888887788888999999999999999999999999999999
Q ss_pred hHHHh--hhc-CCCchhHHHHHHHHHHHHHHHHhc
Q 045196 184 LLVVV--GRM-SPSLSFLVFGALSIFSGVLSLWLP 215 (255)
Q Consensus 184 ~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 215 (255)
.+.++ ... .+...|...+++.+++.++++..|
T Consensus 442 Piag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 442 PIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99984 222 366678888888888877766666
No 156
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.28 E-value=1.5e-10 Score=93.71 Aligned_cols=155 Identities=12% Similarity=-0.080 Sum_probs=86.5
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHH-HHhhheeeeecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcc-hhHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVG-FVYYGIQLNVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTN-RRLLLS 101 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g-rr~~l~ 101 (255)
.++++++++..+...+..+....... +..+...+..+..+.+.... .....++.+++.++.+++.||.. ||+...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~ 287 (379)
T TIGR00881 208 FLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPL 287 (379)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHH
Confidence 35566777765544333333333322 22222222223445544333 33445677889999999999863 333222
Q ss_pred -HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhh
Q 045196 102 -RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGAS 180 (255)
Q Consensus 102 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 180 (255)
..........+...... +..+.+...+..++.+++..+..+..+.+..|.+|++.|+++.|+.+....+|+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 360 (379)
T TIGR00881 288 AVFFMALIIVSLLVYWLN-------PAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGI 360 (379)
T ss_pred HHHHHHHHHHHHHHHhcC-------cchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhh
Confidence 22211111111111110 1122233333334444444445566678899999999999999999999999999
Q ss_pred hhhhHHHh
Q 045196 181 VSPLLVVV 188 (255)
Q Consensus 181 ~~p~~~~~ 188 (255)
++|.+.+.
T Consensus 361 ~~~~~~g~ 368 (379)
T TIGR00881 361 LAGLPLGY 368 (379)
T ss_pred hhhhhHHH
Confidence 99998874
No 157
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.28 E-value=1.7e-14 Score=119.89 Aligned_cols=140 Identities=21% Similarity=0.172 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 73 VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 73 ~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
.....++.++|++++|+++||+|||+.+.++.++..+..++..+.. ...+.+.+.+..++.+++.++..+...
T Consensus 52 ~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 52 TSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAP-------SYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHhhhcccccccccccccccccccccccccccccccccccccc-------ccccccccccccccccccccccccccc
Confidence 3445568889999999999999999999999999888888877762 011677778888899998888889999
Q ss_pred hhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh----h-hcCCCchhHHHHHHHHHHHHHHHHhccCCC
Q 045196 153 IYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV----G-RMSPSLSFLVFGALSIFSGVLSLWLPETKN 219 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (255)
.++.|..|++.|+...++.+....+|..++..+... . ...|+..+.+.++..++..+..+++||+..
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~ 196 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPR 196 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999998888887777766655431 1 123566666666666555555677898744
No 158
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.27 E-value=3.3e-11 Score=96.71 Aligned_cols=149 Identities=16% Similarity=0.085 Sum_probs=95.7
Q ss_pred hHHhhcChhHHHHHHHHHHHHHHHHHHhhheeee-ecccCch-hHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 28 NESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLN-VGNLNFN-LYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
++.+++++..+...+..+...+.........+.+ .+.++.+ ..... .+..+..+++.++.++++||+++|+...+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 278 (352)
T PF07690_consen 199 FKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLI 278 (352)
T ss_dssp CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 5666666654422222222222322222223333 4455656 44443 33445666778999999999998877777
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhh
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVS 182 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 182 (255)
......+..+.+..... ..+....+...++.+++.+...+....+..|.+|++.|+++.|+.+....+++.++
T Consensus 279 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~ig 351 (352)
T PF07690_consen 279 AILLLILGALGLLLLPF-------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIG 351 (352)
T ss_dssp HHHHHHHHHHHHCCSHH-------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 66666655555444320 01233444455556667777789999999999999999999999999999999998
Q ss_pred h
Q 045196 183 P 183 (255)
Q Consensus 183 p 183 (255)
|
T Consensus 352 P 352 (352)
T PF07690_consen 352 P 352 (352)
T ss_dssp H
T ss_pred C
Confidence 7
No 159
>PRK10133 L-fucose transporter; Provisional
Probab=99.26 E-value=1.1e-09 Score=90.65 Aligned_cols=150 Identities=13% Similarity=0.087 Sum_probs=95.8
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHH-HHhhheeeeec-ccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVG-FVYYGIQLNVG-NLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLL 100 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l 100 (255)
.+.++++++|.++...+..++...... ...|...+..+ ..+.+..... ....++.++|.++++++.||+|||+++
T Consensus 249 ~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l 328 (438)
T PRK10133 249 ASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL 328 (438)
T ss_pred hhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 346678888876554333333222222 12222222223 4566654443 445567888999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhh
Q 045196 101 SRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGAS 180 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 180 (255)
..+..+..+.+++..+. ... ..+....+.+++.+..+|..++...|.+|++ .+++.++... ..+|+.
T Consensus 329 ~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~ 395 (438)
T PRK10133 329 AAYALIAMALCLISAFA----------GGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGG 395 (438)
T ss_pred HHHHHHHHHHHHHHHHc----------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHhH-Hhccch
Confidence 88877665555444433 122 2344556677788888999999999998864 5677777753 446777
Q ss_pred hhhhHHHh
Q 045196 181 VSPLLVVV 188 (255)
Q Consensus 181 ~~p~~~~~ 188 (255)
++|.+.+.
T Consensus 396 ~~~~i~G~ 403 (438)
T PRK10133 396 IVTPVMGF 403 (438)
T ss_pred HHHHHHHH
Confidence 88877774
No 160
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.26 E-value=3.2e-10 Score=93.28 Aligned_cols=105 Identities=15% Similarity=0.135 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHH-HHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRLL-LSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
....++.+++.++.|+++||++||+. ........++.. ++.... ......+...++..++.....+..+
T Consensus 286 ~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (412)
T TIGR02332 286 AIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW-LLASAT---------DHNLIQLLGIIMASMGSFSAMAIFW 355 (412)
T ss_pred hHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH-HHHHhc---------CCHHHHHHHHHHHHHHhhhhhhHHH
Confidence 44456788899999999999997764 333333333332 222211 1222222222222222222334556
Q ss_pred hhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh
Q 045196 153 IYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
....|.+|++.|+++.|+.+..+++|++++|.+.+.
T Consensus 356 ~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~ 391 (412)
T TIGR02332 356 TTPDQSISLQARAIAIAVINATGNIGSALSPFLIGI 391 (412)
T ss_pred hhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccc
Confidence 677888999999999999999999999999998874
No 161
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.25 E-value=4.1e-10 Score=93.16 Aligned_cols=160 Identities=13% Similarity=0.025 Sum_probs=96.8
Q ss_pred eeeecccCchhHHHHHH---HHHHHHHHHHHHHHHHh----hcchhHHHHHH-HHHHHHHHHHHHHhcccC---CCCCCC
Q 045196 59 QLNVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLS----FTNRRLLLSRS-AYVAGSASILCTLFSNNN---NNKGKG 127 (255)
Q Consensus 59 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~d----r~grr~~l~~~-~~~~~~~~~~~~~~~~~~---~~~~~~ 127 (255)
+.++..+|.+......+ ..+..++..++.|+++| |+|||+.++++ .....++.+++.+..... .++.+.
T Consensus 28 ~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~ 107 (477)
T TIGR01301 28 TPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDK 107 (477)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccc
Confidence 34566677776555444 34566778899999999 59999988775 444444545554432100 000000
Q ss_pred CC-c---hHHHHHHHHHHHHHhhhhhhhhhhhccccchhcH--HHHHHHHHHHHHHhhhhhhhHHHhhh----c------
Q 045196 128 GG-S---WPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVR--NIAVSFLRQALMLGASVSPLLVVVGR----M------ 191 (255)
Q Consensus 128 ~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--~~~~~~~~~~~~~g~~~~p~~~~~~~----~------ 191 (255)
.+ . +..++...+..++.....+...++++|++|+++| +.+.++.+...++|+++++.+.++.. .
T Consensus 108 ~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~ 187 (477)
T TIGR01301 108 KTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTE 187 (477)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccc
Confidence 11 1 1222223333445555667788999999998865 57888888888999999888776321 0
Q ss_pred -------CCCchhHHHHHHHHHHHHHH-HHhccCC
Q 045196 192 -------SPSLSFLVFGALSIFSGVLS-LWLPETK 218 (255)
Q Consensus 192 -------~~~~~~~~~~~~~~~~~~~~-~~~~e~~ 218 (255)
+....|++.+++.+++.++. +..+|..
T Consensus 188 ~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 188 ACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 22345666666666665554 4557754
No 162
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.25 E-value=4.2e-10 Score=94.48 Aligned_cols=176 Identities=16% Similarity=0.062 Sum_probs=116.2
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeec-ccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVG-NLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
.++-+.++|..+..++...+..++.....-.++.+.. .++.+.... ....+++.++|.++.+++.+|+++++++..
T Consensus 210 G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~ 289 (524)
T PF05977_consen 210 GLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLL 289 (524)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHH
Confidence 4444555665443333333322222222222233332 345444333 334567888899999999999999888888
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhh
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVS 182 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 182 (255)
+.++.+++.+.+.+. .+.+...+..++.+++.........+...+..|.+.||++.++..+....+..+|
T Consensus 290 ~~~~~a~~~~~lal~----------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lG 359 (524)
T PF05977_consen 290 ASLLFALALLLLALS----------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLG 359 (524)
T ss_pred HHHHHHHHHHHHhcc----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 888888777777665 4666666677777777777777788899999999999999999998888888888
Q ss_pred hhHHHh--hhcCCCchhHHHHHHHHHHHHHHH
Q 045196 183 PLLVVV--GRMSPSLSFLVFGALSIFSGVLSL 212 (255)
Q Consensus 183 p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
.++.|. ...+....+.+.++..+++.++..
T Consensus 360 sll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 360 SLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 888874 334455556655555555554443
No 163
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.24 E-value=1e-09 Score=89.24 Aligned_cols=155 Identities=15% Similarity=0.073 Sum_probs=83.7
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHH-HHhhheeeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVG-FVYYGIQLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
+++++++++..+...+...+...... ...+...++.+..+.+..... ....++.+++.++.+++.||+|||+.+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~ 265 (377)
T PRK11102 186 NFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRF 265 (377)
T ss_pred HHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 45667777764433322222221111 111111223344555543332 33456777889999999999999999888
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHH-HHhhhh
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQAL-MLGASV 181 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~g~~~ 181 (255)
+..+..+..+....... .....+...+...+...+.+...+....+..|..| +.|+++.++.+... .++..+
T Consensus 266 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~ 338 (377)
T PRK11102 266 GLWIQFIMGIWLVVSAL------LDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIV 338 (377)
T ss_pred HHHHHHHHHHHHHHHHH------HhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHH
Confidence 77665444333322210 00223333333323333333344455566778777 67899999887665 366667
Q ss_pred hhhHHHh
Q 045196 182 SPLLVVV 188 (255)
Q Consensus 182 ~p~~~~~ 188 (255)
++++...
T Consensus 339 g~~~~~~ 345 (377)
T PRK11102 339 GALLSLA 345 (377)
T ss_pred HHHHHhc
Confidence 7766543
No 164
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.24 E-value=2.4e-10 Score=105.52 Aligned_cols=152 Identities=10% Similarity=-0.128 Sum_probs=101.9
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhhee-eeecccCchhH-H---HHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQ-LNVGNLNFNLY-F---SVALNALMEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
.++.+++++.++..++...+.++........++ +....++.+.. . .....+++.+++.++.++++||+++++.+.
T Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~ 303 (1146)
T PRK08633 224 NLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVP 303 (1146)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchh
Confidence 456677777655444444444333322222222 22333454433 2 233345677889999999999999998888
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhh
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 181 (255)
++.++.+++.+++.+. .+.+..++..++.+++.+...+...+++.+..|++.||+++|+.+++..+|.++
T Consensus 304 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~ 373 (1146)
T PRK08633 304 LGALGLALSLFLLPTA----------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLL 373 (1146)
T ss_pred HHHHHHHHHHHHHHHh----------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHH
Confidence 8777777666666554 344555555566666666667788899999999999999999999999988877
Q ss_pred hhhHHHh
Q 045196 182 SPLLVVV 188 (255)
Q Consensus 182 ~p~~~~~ 188 (255)
++.+.+.
T Consensus 374 ~~~~~~~ 380 (1146)
T PRK08633 374 FLALTTL 380 (1146)
T ss_pred HHHHHHH
Confidence 7766653
No 165
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.24 E-value=2.6e-10 Score=93.31 Aligned_cols=173 Identities=7% Similarity=-0.112 Sum_probs=94.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhheeeee-cccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 045196 35 KWAAKRLIMVMTAGFGVGFVYYGIQLNV-GNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSA 110 (255)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~ 110 (255)
|.++......++.+.........++.++ +.++.+...... +..+...++.++.|+++||+|||+.++.+....++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVL 81 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 3334433344444444333332333333 345766554443 345677888999999999999999998776655443
Q ss_pred HHHHHHhcccCCCCCCC--CCch-HHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 111 SILCTLFSNNNNNKGKG--GGSW-PQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 111 ~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
.......... +. ...+ ...+..++.+++.+...+....+..|..+ .++...+.....+.+|.+++|.+.+
T Consensus 82 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g 154 (396)
T TIGR00882 82 FAPFFIYVFG-----PLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAG 154 (396)
T ss_pred HHHHHHHHhh-----hHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHh
Confidence 3322111000 00 0011 11222233333334344445455544322 2344567777778888899998887
Q ss_pred h-hhcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 188 V-GRMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 188 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
. ...+++.+|++.+++.++..++.+..
T Consensus 155 ~l~~~~~~~~f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 155 ILFSIDPQIVFWLGSGFALILMLLLMFA 182 (396)
T ss_pred hhhccCchHHHHHHHHHHHHHHHHHHHh
Confidence 4 34567777877777777665554443
No 166
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.24 E-value=7.8e-10 Score=91.73 Aligned_cols=140 Identities=13% Similarity=0.054 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhh
Q 045196 70 YFSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFD 149 (255)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (255)
.....+..++.+++.+.++.+.||++-.+.+....+..++..++.... .+.+.++++.++.+++.+..+|
T Consensus 84 ~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~----------~s~~~~ialr~llGl~es~~wP 153 (495)
T KOG2533|consen 84 GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV----------HSFPGLIALRFLLGLFESGGWP 153 (495)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH----------hhhHHHHHHHHHHHHHhcccch
Confidence 344455667889999999999999997777666666666655555554 5788889999999999999999
Q ss_pred hhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--------hhcCCCchhHHHHHHHHHHHHHH-HHhccCCC
Q 045196 150 VMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--------GRMSPSLSFLVFGALSIFSGVLS-LWLPETKN 219 (255)
Q Consensus 150 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~ 219 (255)
....+++..|..++|+.-+|+.+....+|+++++++... ...+|++.|++-++++++..++. +++|+...
T Consensus 154 ~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 154 GVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 999999999999999999999999999999998888753 34578999999999888877665 46675433
No 167
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.23 E-value=1.2e-09 Score=89.36 Aligned_cols=170 Identities=17% Similarity=0.121 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHHhhheeee-ecccCchhHHHHHHHH---H-HHHHHHHHHHHHHhhcchhHHHH-HHHHHHHHHH
Q 045196 38 AKRLIMVMTAGFGVGFVYYGIQLN-VGNLNFNLYFSVALNA---L-MEIPAVVIGTVLLSFTNRRLLLS-RSAYVAGSAS 111 (255)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~-~~~~~~~~~g~l~dr~grr~~l~-~~~~~~~~~~ 111 (255)
+..++..++..+...+....++.+ .++++.+......+.+ + ..+.+.+.+++ .||+|||+.++ .+.+..++..
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~ 96 (393)
T PRK15011 18 TAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLAC 96 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHH
Confidence 333444444444444444444443 4566776665554432 2 33345555566 99999988754 4444444444
Q ss_pred HHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHH--HHHHHHHHHHHHhhhhhhhHHHh-
Q 045196 112 ILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRN--IAVSFLRQALMLGASVSPLLVVV- 188 (255)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~--~~~~~~~~~~~~g~~~~p~~~~~- 188 (255)
.+..+. ++.+..++...+.+.......+....+..|..+++.|. ...++.+....+|.+++|.+.+.
T Consensus 97 ~~~~~~----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l 166 (393)
T PRK15011 97 TLFAWN----------RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYAL 166 (393)
T ss_pred HHHHHh----------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 444443 34444333333333333445567777777777665553 33467777888999999999884
Q ss_pred -hhcCCCchhHHHHHHHHHHHHHH-HHhccCC
Q 045196 189 -GRMSPSLSFLVFGALSIFSGVLS-LWLPETK 218 (255)
Q Consensus 189 -~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~ 218 (255)
...+|+..|++.++.+++..+.. +++||.+
T Consensus 167 ~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 167 AMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 34578888888777766665544 4567654
No 168
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.23 E-value=2.4e-09 Score=84.59 Aligned_cols=121 Identities=17% Similarity=0.173 Sum_probs=81.8
Q ss_pred cCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHH
Q 045196 65 LNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGF 141 (255)
Q Consensus 65 ~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (255)
++.+.... ......+.++|.+++++++||+|+|+.+.++..++.+..++.... .. .......++.+
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~----------~~-~~~~~~~~l~g 241 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT----------HG-YVAMWFVLALG 241 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc----------CC-HHHHHHHHHHH
Confidence 35554333 233445778899999999999999998887777666655444333 22 22223444566
Q ss_pred HHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhH
Q 045196 142 MAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFL 198 (255)
Q Consensus 142 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~ 198 (255)
++.+..+|...+...+.+|++ .+++.++. ..+.+|+++.|.+.|. +..+...+++
T Consensus 242 ~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 242 LFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 778888899999999988865 45666664 5677999999998884 3345555554
No 169
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.22 E-value=1.5e-10 Score=93.33 Aligned_cols=117 Identities=10% Similarity=0.010 Sum_probs=77.8
Q ss_pred eeecccCchhHHHHHHH---H-HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCC-CCCCCCCchHHH
Q 045196 60 LNVGNLNFNLYFSVALN---A-LMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNN-NKGKGGGSWPQL 134 (255)
Q Consensus 60 ~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 134 (255)
.+..+.|.+......+. + +..+++.++++++.||+|||+.++++.++.++...+..+...... .+....+.+...
T Consensus 234 ~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (356)
T TIGR00901 234 LFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLF 313 (356)
T ss_pred HHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHH
Confidence 33444666654443322 2 356689999999999999999988888777766555444310000 000001234455
Q ss_pred HHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHH
Q 045196 135 IIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALM 176 (255)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 176 (255)
...++..++.+...+...++..|.+|++.||+.+|+.+...+
T Consensus 314 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 314 LTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 555566667777889999999999999999999999887654
No 170
>PRK11043 putative transporter; Provisional
Probab=99.22 E-value=1.9e-09 Score=88.47 Aligned_cols=158 Identities=13% Similarity=-0.017 Sum_probs=91.5
Q ss_pred ccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHH
Q 045196 25 DNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
+.++++++++++++...+................+.+.+..+.+...... ...++.++|.++.+++.||+|+|+.+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~ 272 (401)
T PRK11043 193 ALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLP 272 (401)
T ss_pred HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 34677888888755443333222221111111123344445665443332 234566778888999999999998765
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhh
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 181 (255)
......+++.+.+...... .....+..++...+.+++.+...+.......|..|. .|+++.|+.+.....++..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~ 346 (401)
T PRK11043 273 WLLVLFAVSVIAIWLASLL-----SHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-ATGKAAALQNTLQLGLCFL 346 (401)
T ss_pred HHHHHHHHHHHHHHHHHHh-----ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-cChHHHHHHHHHHHHHHHH
Confidence 5554444433332221100 012333333334445555566667777777777774 6999999999988888888
Q ss_pred hhhHHHh
Q 045196 182 SPLLVVV 188 (255)
Q Consensus 182 ~p~~~~~ 188 (255)
++.+.+.
T Consensus 347 ~~~~~g~ 353 (401)
T PRK11043 347 ASLLVSA 353 (401)
T ss_pred HHHHHHH
Confidence 8887773
No 171
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.21 E-value=8e-10 Score=92.81 Aligned_cols=152 Identities=11% Similarity=0.043 Sum_probs=100.5
Q ss_pred HhhcChhHHHHHHHHHHHHHHHHHHhhheeeeec-ccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 045196 30 SLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVG-NLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAY 105 (255)
Q Consensus 30 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~ 105 (255)
++++++.++...+..++..+......+..+.+.. ..+.+..... ....++.+++.++.|++.||+|||+.+.++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~ 329 (485)
T TIGR00711 250 RLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLI 329 (485)
T ss_pred HHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHH
Confidence 5677776555444444444433333333343433 3465554433 33456778899999999999999999888887
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhH
Q 045196 106 VAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLL 185 (255)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~ 185 (255)
+.++...++.+... +..+.+......++.+++.+...+.......+..|++.|+++.|+.+....+|+.+++.+
T Consensus 330 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i 403 (485)
T TIGR00711 330 LYAVGFYWRAFTFT------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTAL 403 (485)
T ss_pred HHHHHHHHHhccCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 77776666552210 112334444445556666666556666677788999999999999999999999999888
Q ss_pred HH
Q 045196 186 VV 187 (255)
Q Consensus 186 ~~ 187 (255)
.+
T Consensus 404 ~g 405 (485)
T TIGR00711 404 IT 405 (485)
T ss_pred HH
Confidence 77
No 172
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.20 E-value=8.3e-10 Score=90.28 Aligned_cols=173 Identities=11% Similarity=-0.040 Sum_probs=105.0
Q ss_pred hHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecc-cCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHH
Q 045196 28 NESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGN-LNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRS 103 (255)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~ 103 (255)
++.++++|..+..++...+.+.+.....+..+.|.+. ++.+..... ...+++.++++++.+++.||.++|+.+..+
T Consensus 198 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g 277 (393)
T PRK11195 198 CRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAG 277 (393)
T ss_pred HHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHH
Confidence 4566777765544444333344333334444444443 455544333 334567788999999999999988877776
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhc-HHHHHHHHHHHHHHhhhhh
Q 045196 104 AYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNV-RNIAVSFLRQALMLGASVS 182 (255)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~-r~~~~~~~~~~~~~g~~~~ 182 (255)
.. .++..+.+... ++.+..+...++.+++.+...+...+...+..|++. +|++.++.+....++..++
T Consensus 278 ~~-~~~~~~~~~~~----------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~ 346 (393)
T PRK11195 278 IL-MGLVVLLMALQ----------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLM 346 (393)
T ss_pred HH-HHHHHHHHHHH----------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHH
Confidence 43 33333333332 234444444555555555555667777788766655 7999999999999998888
Q ss_pred hhHHHh-hhcCCCchhHHHHHHHHHHHHHH
Q 045196 183 PLLVVV-GRMSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 183 p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
..+.+. ...+....+.+.+...+++..+.
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 347 LGLYSLLVKLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 887773 44555555555555444444443
No 173
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.19 E-value=2.6e-09 Score=87.76 Aligned_cols=157 Identities=9% Similarity=-0.117 Sum_probs=90.5
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeee-ecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLN-VGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
.++++++++|..+.......+............+.+ ...++.+..... ....++.+++.++.++++||+++|+.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~ 285 (406)
T PRK15402 206 RDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIR 285 (406)
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 345677888775543333222222111111111222 233455543322 2233467788999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhh
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 181 (255)
++..+..+..+++...... ...+.+..++..++.+++.+...+......... +++.|++..++.+....++..+
T Consensus 286 ~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~ 359 (406)
T PRK15402 286 MGLWPMVAGLLLAALATVI-----SSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTV 359 (406)
T ss_pred HHHHHHHHHHHHHHHHHHc-----ccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHH
Confidence 8877666655555443100 012333334444445555554444444444333 3478999999999999999999
Q ss_pred hhhHHHh
Q 045196 182 SPLLVVV 188 (255)
Q Consensus 182 ~p~~~~~ 188 (255)
++.+.+.
T Consensus 360 g~~~~~~ 366 (406)
T PRK15402 360 GIELSKH 366 (406)
T ss_pred HHHHHHh
Confidence 9988884
No 174
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.19 E-value=1.5e-09 Score=87.51 Aligned_cols=151 Identities=11% Similarity=-0.068 Sum_probs=92.1
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhc-chhHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFT-NRRLLLSR 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~-grr~~l~~ 102 (255)
..++++|+|..+...+...+............+.+.++.+.+.... .....++.+++.++.|++.||+ +||+.+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~ 268 (355)
T TIGR00896 189 TPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAV 268 (355)
T ss_pred CCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHH
Confidence 4566788876554333333222222222122234444556654333 3344567888999999999999 56666667
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhcccc-chhcHHHHHHHHHHHHHHhhhh
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELF-PTNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~ 181 (255)
+..+++++.+.+.+.. +..... ...+.+++.+...+.....+.+.. +++.++...++.+..+.+++++
T Consensus 269 ~~~~~~~~~~~~~~~~----------~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 337 (355)
T TIGR00896 269 LAVLQLVGLCGLLFAP----------MHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAAL 337 (355)
T ss_pred HHHHHHHHHHHHHHhh----------hhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666655555441 122222 234455566666666666665444 4667789999999999999999
Q ss_pred hhhHHHh
Q 045196 182 SPLLVVV 188 (255)
Q Consensus 182 ~p~~~~~ 188 (255)
+|.+.+.
T Consensus 338 gp~~~G~ 344 (355)
T TIGR00896 338 GPLFVGV 344 (355)
T ss_pred HHHHHHH
Confidence 9998884
No 175
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.18 E-value=2.4e-09 Score=87.80 Aligned_cols=153 Identities=8% Similarity=-0.048 Sum_probs=88.1
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHHHH---HHHHHHHHHHHHHHHH-hhcchhHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSVAL---NALMEIPAVVIGTVLL-SFTNRRLLLS 101 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~-dr~grr~~l~ 101 (255)
.+++++++++.++...+................+.+.++.+.+......+ .++....+....+++. ||++.++.+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 278 (400)
T PRK11646 199 EGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLM 278 (400)
T ss_pred HHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 45677888876543322222222111111122344444433333332222 2233333344445555 4566666666
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhh
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 181 (255)
.+..+.++..+++... ++.+...+...+.+.+.+...+...+++.|..|++.|+++.|+.+....+|..+
T Consensus 279 ~~~~~~~~~~~~l~~~----------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i 348 (400)
T PRK11646 279 AGLLIMSLSMFPIGMV----------SNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAI 348 (400)
T ss_pred HHHHHHHHHHHHHHHh----------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHh
Confidence 6666666665555444 234434333344444455555777889999999999999999999999999999
Q ss_pred hhhHHHh
Q 045196 182 SPLLVVV 188 (255)
Q Consensus 182 ~p~~~~~ 188 (255)
+|.+.+.
T Consensus 349 g~~l~G~ 355 (400)
T PRK11646 349 GYIGGGW 355 (400)
T ss_pred cccchHH
Confidence 9998884
No 176
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.18 E-value=8.4e-10 Score=89.02 Aligned_cols=115 Identities=11% Similarity=0.016 Sum_probs=84.5
Q ss_pred eecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHH
Q 045196 61 NVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIE 137 (255)
Q Consensus 61 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
+.++++.+...... ...++..++.++.|+++||+|||+.+.++.++..+..+.. .. ++.+..++..
T Consensus 26 l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~----------~~~~~l~~~~ 94 (355)
T TIGR00896 26 IRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA----------PGTALLFAGT 94 (355)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh----------ccHHHHHHHH
Confidence 34455665544433 3456778899999999999999999998887766655554 33 3455556666
Q ss_pred HHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 138 GVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
++.+++.+...+....++.|.+| ++|+++.++.+....+|..++|.+.+
T Consensus 95 ~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~ 143 (355)
T TIGR00896 95 ALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATV 143 (355)
T ss_pred HHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 66676666656667777888887 57999999999988898888887766
No 177
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.16 E-value=5.8e-09 Score=85.73 Aligned_cols=98 Identities=17% Similarity=0.180 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 045196 78 LMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVE 157 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (255)
....+|.++++++.||+++|+.+.++..++.+++++.... +... ......+.+++.+..+|..++...+
T Consensus 280 ~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~----------~~~~-~~~~l~~~glf~s~~fp~i~sl~~~ 348 (410)
T TIGR00885 280 VIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA----------GGHV-GLYCLTLCSAFMSLMFPTIYGIALK 348 (410)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc----------CChH-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567899999999999999999888888887777776665 2222 3444555566777788999999999
Q ss_pred ccchhcHHHHHHHHHHHHHHhhhhhhhHHHh
Q 045196 158 LFPTNVRNIAVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 158 ~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
..+++.+..+.++.... +|+.+.|.+.+.
T Consensus 349 ~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~ 377 (410)
T TIGR00885 349 GLGQDTKYGAAGLVMAI--IGGGIVPPLQGF 377 (410)
T ss_pred hhhhhhhhhHHHHHHHH--hccchHHHHHHH
Confidence 99987665555555543 899999999884
No 178
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.16 E-value=5.3e-09 Score=85.57 Aligned_cols=156 Identities=13% Similarity=0.088 Sum_probs=86.5
Q ss_pred ccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecc-cCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHH
Q 045196 25 DNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGN-LNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLL 100 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l 100 (255)
+..++++++++..+...+..+.............+.+..+ ++.+......+ ..++.+++.++.+++.||++|+...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 276 (394)
T PRK11652 197 LASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ 276 (394)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4457778888875543333332222222211122223333 55554443322 3345566677777777777743333
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhh
Q 045196 101 SRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGAS 180 (255)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 180 (255)
.................. ...+.+......++.+++.+...+....+..|.+| +.++++.++.+....+|+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~ 348 (394)
T PRK11652 277 SVICCLLAGLLMWIPGWF-------GVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSG 348 (394)
T ss_pred HHHHHHHHHHHHHHHHHh-------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHH
Confidence 222222221111111110 01234444555555666666677888888889887 4689999999999999999
Q ss_pred hhhhHHHh
Q 045196 181 VSPLLVVV 188 (255)
Q Consensus 181 ~~p~~~~~ 188 (255)
+++.+.+.
T Consensus 349 ~~~~~~~~ 356 (394)
T PRK11652 349 LAALLSAM 356 (394)
T ss_pred HHHHHHHH
Confidence 99998874
No 179
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.15 E-value=1.8e-10 Score=93.25 Aligned_cols=168 Identities=15% Similarity=0.155 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHhhheeee---------ecccCchhHHHHHHHHH---HHHHHHHHHHHHHhhc-chhHHHHHHHHH
Q 045196 40 RLIMVMTAGFGVGFVYYGIQLN---------VGNLNFNLYFSVALNAL---MEIPAVVIGTVLLSFT-NRRLLLSRSAYV 106 (255)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~---~~~~~~~~~g~l~dr~-grr~~l~~~~~~ 106 (255)
.+...+..-+.--+.||++... .+.+|.+...+..+.+. .--...+++||++||+ |+|+.++.+.++
T Consensus 22 ~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail 101 (498)
T COG3104 22 GLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAIL 101 (498)
T ss_pred hHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Confidence 3555555666666666665411 11234665555444332 1123678999999995 999999999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhc--HHHHHHHHHHHHHHhhhhhhh
Q 045196 107 AGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNV--RNIAVSFLRQALMLGASVSPL 184 (255)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~~~~~~~~~~g~~~~p~ 184 (255)
.++..+++.... ......+.+...+...+.+..=+....++.|++|++. |-.++++.+...++|++++|+
T Consensus 102 ~~iGh~~L~~~~--------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~ 173 (498)
T COG3104 102 MAIGHLVLAISS--------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPI 173 (498)
T ss_pred HHHHHHHHhccc--------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHH
Confidence 999998887751 0123334444444446677777899999999998643 778888889999999999999
Q ss_pred HHHh--hhcCCCchhHHHHHHHHHHHHHHHHhc
Q 045196 185 LVVV--GRMSPSLSFLVFGALSIFSGVLSLWLP 215 (255)
Q Consensus 185 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (255)
+.++ ...+++..|...++-..++.+.....+
T Consensus 174 i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 174 ITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9985 445666677777777777766555443
No 180
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.15 E-value=2e-09 Score=87.79 Aligned_cols=155 Identities=8% Similarity=-0.041 Sum_probs=96.4
Q ss_pred HHHHHHhhheeeeecccCchhHHHHHHHH---HHHHHHHHHHHHHHhhcchhH----HHHHHHHHHHHHHHHHHHhcccC
Q 045196 49 FGVGFVYYGIQLNVGNLNFNLYFSVALNA---LMEIPAVVIGTVLLSFTNRRL----LLSRSAYVAGSASILCTLFSNNN 121 (255)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr~grr~----~l~~~~~~~~~~~~~~~~~~~~~ 121 (255)
++..+....++.+..+.+.+......+.+ +...++.++.|.++||+|||. .+.+... +..+.....
T Consensus 18 ~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~---~~~~~~~~~---- 90 (382)
T PRK11128 18 FAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTL---LFAVAFWFG---- 90 (382)
T ss_pred HHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHH---HHHHHHHHh----
Confidence 33444444455677778877666555444 456778899999999999842 2222211 111122121
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHH
Q 045196 122 NNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLV 199 (255)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~ 199 (255)
.++.|..++..++.+.+.+...+...++..+. .+.|+.+.+.....+.+|.+++|.+.++ ...+++..|++
T Consensus 91 -----~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~ 163 (382)
T PRK11128 91 -----AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWI 163 (382)
T ss_pred -----cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHH
Confidence 14566666666666666666667777777665 3457888888888889999999999984 34577777776
Q ss_pred HHHHHHHHHHHHHHhccC
Q 045196 200 FGALSIFSGVLSLWLPET 217 (255)
Q Consensus 200 ~~~~~~~~~~~~~~~~e~ 217 (255)
.++..++..+..++.||.
T Consensus 164 ~~~~~~~~~~~~~~~~~~ 181 (382)
T PRK11128 164 LTAGVASMLLGQLLRPTI 181 (382)
T ss_pred HHHHHHHHHHHHHccCCC
Confidence 665444443333344554
No 181
>PRK10054 putative transporter; Provisional
Probab=99.14 E-value=1.9e-09 Score=88.28 Aligned_cols=100 Identities=15% Similarity=0.028 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 045196 79 MEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVEL 158 (255)
Q Consensus 79 ~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (255)
...+..+..+++.||.++|+.+..+..+.++....+.+.. ++.+...+...+.+++.....+.....+.+.
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~ 326 (395)
T PRK10054 256 MVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG---------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHI 326 (395)
T ss_pred heeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc---------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 3344567888999999999998888776666655554431 2344444455555555555567777889999
Q ss_pred cchhcHHHHHHHHHHHHHHhhhhhhhHHHh
Q 045196 159 FPTNVRNIAVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 159 ~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
.|++.|++..+..+ ...+|..++|.+.+.
T Consensus 327 ~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~ 355 (395)
T PRK10054 327 APPGMKASYFSAQS-LGWLGAAINPLVSGV 355 (395)
T ss_pred CCcccceehHhHHH-HHHHHHHHHHHHHHH
Confidence 99999999888654 667899999999984
No 182
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.14 E-value=3.3e-09 Score=86.50 Aligned_cols=142 Identities=10% Similarity=-0.010 Sum_probs=89.8
Q ss_pred HHHHhhheeeeecccCchhHHHHHHHH---HHHHHHHHHHHHHHhhcchhHHHHHHHHHHH-HHHHHHHHhcccCCCCCC
Q 045196 51 VGFVYYGIQLNVGNLNFNLYFSVALNA---LMEIPAVVIGTVLLSFTNRRLLLSRSAYVAG-SASILCTLFSNNNNNKGK 126 (255)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~ 126 (255)
..+....++.+.++.|.+......+.+ +...++.++.+.++||+||+........... +..+......
T Consensus 20 ~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~-------- 91 (382)
T TIGR00902 20 YGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGA-------- 91 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhh--------
Confidence 344444455677788887766655543 4666788999999999998654322221111 1111111111
Q ss_pred CCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHH
Q 045196 127 GGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGAL 203 (255)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~ 203 (255)
++.+..++...+.+.+.+...+...++..+. .++|++..|.....+.+|.+++|.+.+. ...+++..|.+.+..
T Consensus 92 -~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 92 -HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred -hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 4566665555555555555667777776553 5678999999999999999999998873 344676666665544
No 183
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.13 E-value=1.2e-08 Score=83.54 Aligned_cols=167 Identities=10% Similarity=0.030 Sum_probs=94.4
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHH-HHhhheeeeecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVG-FVYYGIQLNVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
+.++.+++|..+...+..+....... ...+..+.+.+..|.+.... ....+++.+++.++.+++.||.+|+ .++.
T Consensus 208 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-~l~~ 286 (394)
T PRK10213 208 NTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-ALAG 286 (394)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-HHHH
Confidence 45677888775544333222222221 12222344455566654332 3334567788999999999996544 4343
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhh
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVS 182 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 182 (255)
+..+..+..+.+.... .+.+......++.+++.+...+...+++.+..|+ .++...++......+|..++
T Consensus 287 ~~~~~~~~~~~l~~~~---------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G 356 (394)
T PRK10213 287 APLVLAVSALVLTLWG---------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-QAEKAGSIQVAVIQLANTCG 356 (394)
T ss_pred HHHHHHHHHHHHHHHh---------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHHHH
Confidence 4333333323322221 3445555555566666666666677778888874 45666777777778899999
Q ss_pred hhHHHhh--hcCCCchhHHHHHHH
Q 045196 183 PLLVVVG--RMSPSLSFLVFGALS 204 (255)
Q Consensus 183 p~~~~~~--~~~~~~~~~~~~~~~ 204 (255)
|.+.+.. ..+....+...+++.
T Consensus 357 ~~l~G~l~~~~g~~~~~~~~~~~~ 380 (394)
T PRK10213 357 AAIGGYALDNIGLTSPLMLSGTLM 380 (394)
T ss_pred HHHHHHHHhccChhhHHHHHHHHH
Confidence 9999843 234444444444433
No 184
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.13 E-value=3.2e-09 Score=89.48 Aligned_cols=152 Identities=13% Similarity=0.010 Sum_probs=100.5
Q ss_pred HHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeec-ccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 045196 29 ESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVG-NLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSA 104 (255)
Q Consensus 29 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~ 104 (255)
.+++|++.++...+..+...+......+..+.+++ ..|.+....... .+++..++.++.|++.||+|||+.+..+.
T Consensus 253 ~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~ 332 (495)
T PRK14995 253 MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGM 332 (495)
T ss_pred HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 35777776444333333333322222222333333 346665444333 44677788999999999999999888887
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhh
Q 045196 105 YVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPL 184 (255)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~ 184 (255)
.+.++..+++.... ...+.+......++.+++.+...+.....+.+..|++.++.+.++.++...+|+.+++.
T Consensus 333 ~~~~~~~~~l~~~~-------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~a 405 (495)
T PRK14995 333 ALSALSFYGLAMTD-------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIA 405 (495)
T ss_pred HHHHHHHHHHHHhc-------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHH
Confidence 77766655554431 11234444555666677677777777888888999999999999999999999999988
Q ss_pred HHH
Q 045196 185 LVV 187 (255)
Q Consensus 185 ~~~ 187 (255)
+.+
T Consensus 406 i~g 408 (495)
T PRK14995 406 IFG 408 (495)
T ss_pred HHH
Confidence 776
No 185
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.13 E-value=1.3e-09 Score=82.25 Aligned_cols=137 Identities=9% Similarity=0.013 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHhhhe--eeeecccCchhHHHHHHHHH---HHHHHHHHHHHHHhhcchhHHHHHHHHHH-HHHHHH
Q 045196 40 RLIMVMTAGFGVGFVYYGI--QLNVGNLNFNLYFSVALNAL---MEIPAVVIGTVLLSFTNRRLLLSRSAYVA-GSASIL 113 (255)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~l~dr~grr~~l~~~~~~~-~~~~~~ 113 (255)
.+.+.++.+...-+.+++. .++.+.+|.++..++.+.+. ...+.+++.|.++||+||+...+.+..+. .+....
T Consensus 268 ~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~ 347 (459)
T KOG4686|consen 268 VLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSG 347 (459)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhh
Confidence 3444444444444444443 35566778776655444443 44557789999999999998776654433 334444
Q ss_pred HHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh
Q 045196 114 CTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
+.+.. -+++.. ..+.+...+......|..++-+.|.++-|++.|+++...++|-.+.|++.+.
T Consensus 348 l~Ft~---------lsPy~~---m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~ 410 (459)
T KOG4686|consen 348 LFFTF---------LSPYTS---MTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGF 410 (459)
T ss_pred HHhhh---------ccHHHH---HHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhe
Confidence 44432 233322 2222333333334578888889999999999999999999999999999985
No 186
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.11 E-value=1.1e-08 Score=83.51 Aligned_cols=139 Identities=12% Similarity=-0.032 Sum_probs=81.9
Q ss_pred ecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHH
Q 045196 62 VGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEG 138 (255)
Q Consensus 62 ~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (255)
....|.+..... ...+++.+++.++.+++.||+|+|+.+.++..+.++..+++.... ++.+...+..+
T Consensus 227 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~---------~~~~~~~~~~~ 297 (382)
T PRK10091 227 MFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFG---------GMKTASLIFAF 297 (382)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHH---------hhHHHHHHHHH
Confidence 334565544433 345567888999999999999999998888777766665544331 23333333333
Q ss_pred HHHHHHhhhhh-hhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh-hh--cCCCchhHHHHHHHHHHHHHH
Q 045196 139 VGFMAASTAFD-VMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-GR--MSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 139 ~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~ 211 (255)
+.+.+..+..+ .......+..|.+.++.+ ..+....+|..++|.+.+. .+ .++...+...++++++.....
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 33333222223 233344455555555544 3466678999999999984 22 345556666655555544443
No 187
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.09 E-value=1e-10 Score=93.53 Aligned_cols=104 Identities=10% Similarity=-0.086 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhh
Q 045196 70 YFSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFD 149 (255)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (255)
........++.++|.+++|++.||+|||+++...++++.++.++..... ....+..-.+.+...+++.+++.++-+|
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~---~~~~~~~~m~~L~~~R~~LGiGIGGDYP 163 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSV---GTTSPLGVMMTLCFFRFLLGIGIGGDYP 163 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCC---CCCCCcchhhHHHHHHHHhhccccCCCc
Confidence 3344556678999999999999999999999999988888887544431 1111112334667778888999999999
Q ss_pred hhhhhhccccchhcHHHHHHHHHHHHH
Q 045196 150 VMYIYCVELFPTNVRNIAVSFLRQALM 176 (255)
Q Consensus 150 ~~~~~~~e~~p~~~r~~~~~~~~~~~~ 176 (255)
+..++++|....+.||.-.+.......
T Consensus 164 lSAtI~SE~an~~~RGa~iaavFa~Qg 190 (538)
T KOG0252|consen 164 LSATIMSESANKKTRGAFIAAVFAMQG 190 (538)
T ss_pred chHHHhhhhhhhccccceeEEEEEecc
Confidence 999999999999999987776644443
No 188
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.08 E-value=1.6e-08 Score=82.73 Aligned_cols=91 Identities=16% Similarity=0.072 Sum_probs=53.9
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhhee-eeecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQ-LNVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
..++.++++.++...+...+............+ +....+|.+.... ....+++.+++.++.+++.||+|||+.+.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~ 274 (392)
T PRK10473 195 ENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLT 274 (392)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 455677777655544433333222211111112 2223445554333 233456778899999999999999999988
Q ss_pred HHHHHHHHHHHHHHh
Q 045196 103 SAYVAGSASILCTLF 117 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~ 117 (255)
+..+..+..+.+...
T Consensus 275 ~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 275 SQVLFLAAGITLALS 289 (392)
T ss_pred HHHHHHHHHHHHHHH
Confidence 887777666665554
No 189
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.01 E-value=2.7e-09 Score=89.25 Aligned_cols=129 Identities=18% Similarity=0.171 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCch-HHHHHHHHHHHHHhhhhhhhhh
Q 045196 75 LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSW-PQLIIEGVGFMAASTAFDVMYI 153 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
+......+..++.+.+.||+|.|.+.+.+.+++.+.+++..+. ++.| +.+...++.+++.+..+....+
T Consensus 89 l~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~----------~~i~~l~lt~gvi~G~G~~~~~~paiv 158 (509)
T KOG2504|consen 89 LLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFA----------TSLWQLYLTFGVIGGLGLGLIYLPAVV 158 (509)
T ss_pred HHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHH----------hhHHHHHHHHHHHhhccchhhhcchhh
Confidence 3334556678999999999999999999999999999998888 4565 4555666777777777777777
Q ss_pred hhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH--hhhcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 154 YCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV--VGRMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 154 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
++...|+ +.|+.+.|+......+|.++-|.+.. +...+|+..+++.+.+.+-+.+....+
T Consensus 159 iv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~ 220 (509)
T KOG2504|consen 159 ILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALL 220 (509)
T ss_pred hhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 7776665 56999999999999999988887776 366789999999888887666655555
No 190
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.99 E-value=6.4e-09 Score=86.06 Aligned_cols=182 Identities=12% Similarity=0.073 Sum_probs=109.5
Q ss_pred CccchHHhhcChhHHHHHHHHHHHHHH-HHHHhhheeeeecccCchhHHHHHHHH---HHHHHHHHHHHHHHhhcch---
Q 045196 24 SDNKNESLWGTKWAAKRLIMVMTAGFG-VGFVYYGIQLNVGNLNFNLYFSVALNA---LMEIPAVVIGTVLLSFTNR--- 96 (255)
Q Consensus 24 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr~gr--- 96 (255)
.+.+|+++++++..|-..+..+.-... ..+..|...++-+.++.+....+.+.+ +...+..+++|.++||+-+
T Consensus 247 ~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~l 326 (466)
T KOG2532|consen 247 PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRIL 326 (466)
T ss_pred CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 467899999998744333322222222 233344433333446777665555544 5777888999999998744
Q ss_pred ------hHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHH
Q 045196 97 ------RLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSF 170 (255)
Q Consensus 97 ------r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 170 (255)
|..-.++....+++++.+.+.. ....+..+++..+.....+...+-.+.-..+.. ++.-+..+|+
T Consensus 327 s~t~~rkifn~i~~~~~ai~l~~l~~~~--------~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~ 397 (466)
T KOG2532|consen 327 SETTVRKIFNTIAFGGPAVFLLVLAFTS--------DEHRLLAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGI 397 (466)
T ss_pred chHhHHHHHHhHHHHHHHHHHHeeeecC--------CCcchHHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHH
Confidence 3333455555555555555552 223334444444433333433333344444434 4567899999
Q ss_pred HHHHHHHhhhhhhhHHHhhh-----cCCCchhHHHHHHHHHHHHHHHHh
Q 045196 171 LRQALMLGASVSPLLVVVGR-----MSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 171 ~~~~~~~g~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
.++.+.+.++++|.+.+... ..|...|++.+++.+++.++..+.
T Consensus 398 ~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 398 INFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 99999999999999998421 246677888888888777554433
No 191
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.99 E-value=5.3e-09 Score=84.61 Aligned_cols=145 Identities=9% Similarity=-0.029 Sum_probs=84.8
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeee-cccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNV-GNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
..++++++++.+...+.....+..........+.+. ..++.+..... .+..+..+++.+++|+++||+|||+.+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~ 296 (366)
T TIGR00886 217 DQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLM 296 (366)
T ss_pred HHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHH
Confidence 456677776644433333322222211111122233 34455543333 33445677888999999999999887777
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCC-CchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhh
Q 045196 103 SAYVAGSASILCTLFSNNNNNKGKGG-GSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGA 179 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 179 (255)
+......+..++.+.. ... +.+..+....+..+..+...+..+.+++|.+| +.+|++.|+.+..+++|+
T Consensus 297 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 297 SFLGVAMGAFLVVLGL-------VSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHHHHHHHHHHHHhcC-------CCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 6665555444444331 001 33333344444444555566778888999988 579999999998887764
No 192
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.97 E-value=4.7e-09 Score=87.19 Aligned_cols=155 Identities=10% Similarity=-0.075 Sum_probs=87.4
Q ss_pred CccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecc-cCchhHH---HHHHHHHHHHHHHHHHHHHHhh----cc
Q 045196 24 SDNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGN-LNFNLYF---SVALNALMEIPAVVIGTVLLSF----TN 95 (255)
Q Consensus 24 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr----~g 95 (255)
+...+++.+++|..|...++.++.....+...+..+.++.+ .+.+... ..+...++.+++.+++|+++|| ..
T Consensus 262 ~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~ 341 (495)
T KOG2533|consen 262 KWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFA 341 (495)
T ss_pred CHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHH
Confidence 44567788888875555444444444444333333444444 3344333 2344567889999999999999 56
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHH-HHHHHHH
Q 045196 96 RRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIA-VSFLRQA 174 (255)
Q Consensus 96 rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~-~~~~~~~ 174 (255)
+|..+.....+..+...+..... ..........+.+..+.....+....+.++....+.|... .+.....
T Consensus 342 ~~~~~~~~~~~~~~~g~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~ 412 (495)
T KOG2533|consen 342 RRLLFIVFLCLYAIIGAISLLAA---------AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDG 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh---------ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcc
Confidence 66666665555554443332221 2233333333444444555567788888888866555543 3444444
Q ss_pred HHHhhhhhhhHHH
Q 045196 175 LMLGASVSPLLVV 187 (255)
Q Consensus 175 ~~~g~~~~p~~~~ 187 (255)
.+.+++++|.+..
T Consensus 413 ~~s~~~~~~~~~~ 425 (495)
T KOG2533|consen 413 TGSAGAISGQLFR 425 (495)
T ss_pred hhHHHHhhhhhcc
Confidence 4555555555443
No 193
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.97 E-value=2.1e-08 Score=82.68 Aligned_cols=140 Identities=9% Similarity=0.034 Sum_probs=78.1
Q ss_pred cccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHH
Q 045196 63 GNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNR-RLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEG 138 (255)
Q Consensus 63 ~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (255)
++.|.+......+ ..++.+++.++.|+++||+|| |+++.++.++..+...+..+. ++.+...+..+
T Consensus 31 ~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 100 (418)
T TIGR00889 31 KTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQV----------TTPAGMFPVLL 100 (418)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh----------cCHHHHHHHHH
Confidence 4467665555444 446788899999999999965 777777776665655555544 34554444444
Q ss_pred HHHHHHhhhhhhhh----hhhc----cccchhcHHHHHHHHHHHHHHhhhhhhhHHHhhhcC-CCchhHHHHHHHHHHHH
Q 045196 139 VGFMAASTAFDVMY----IYCV----ELFPTNVRNIAVSFLRQALMLGASVSPLLVVVGRMS-PSLSFLVFGALSIFSGV 209 (255)
Q Consensus 139 ~~~~~~~~~~~~~~----~~~~----e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 209 (255)
+.++......+... .+.. |......|.+..| .+|.+++|.+.+..... .+.+|++.++..++..+
T Consensus 101 l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~~f~~~~~~~~~~~~ 174 (418)
T TIGR00889 101 ANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNIQLYITAGSSALLGV 174 (418)
T ss_pred HHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH
Confidence 44443333333322 2222 2222222333333 35667777777643222 23356666666666555
Q ss_pred HHHHhccCC
Q 045196 210 LSLWLPETK 218 (255)
Q Consensus 210 ~~~~~~e~~ 218 (255)
+.+++||+.
T Consensus 175 ~~~~~~e~~ 183 (418)
T TIGR00889 175 FALTLPDIP 183 (418)
T ss_pred HHhcCCCCC
Confidence 556677763
No 194
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.96 E-value=2.7e-08 Score=92.12 Aligned_cols=162 Identities=9% Similarity=-0.084 Sum_probs=101.1
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeec-ccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVG-NLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSR 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 102 (255)
.++.+.+++.++...+..++.++.........+.++. .++.+.... ....+++.++|.++.|+++|+.++++.+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~ 296 (1140)
T PRK06814 217 LLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPI 296 (1140)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehH
Confidence 4667778877665555444444443322222233333 345554333 334556888899999999998877766655
Q ss_pred HHHHHHHHHHHHHHhccc--CCCC--------CCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHH
Q 045196 103 SAYVAGSASILCTLFSNN--NNNK--------GKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLR 172 (255)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 172 (255)
+.++.+++.+.+.+.... .... ....+.|..++..++.+++.+...+...+++.+..|++.||+++|+.+
T Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~ 376 (1140)
T PRK06814 297 GALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANN 376 (1140)
T ss_pred HHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHH
Confidence 555554444433331000 0000 001344555555566666667777788999999999999999999999
Q ss_pred HHHHHhhhhhhhHHHh
Q 045196 173 QALMLGASVSPLLVVV 188 (255)
Q Consensus 173 ~~~~~g~~~~p~~~~~ 188 (255)
+...++..+++.+.+.
T Consensus 377 ~~~~~~~~ig~~~~g~ 392 (1140)
T PRK06814 377 VLNAAFMVAGTIILAL 392 (1140)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988774
No 195
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.96 E-value=1.1e-07 Score=78.87 Aligned_cols=145 Identities=13% Similarity=0.066 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHhcccCCCC-C---------CCCC-chHHHHHHHHHH
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNR-RLLLSRSAYVAGSASILCTLFSNNNNNK-G---------KGGG-SWPQLIIEGVGF 141 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~-~~~~~~~~~~~~ 141 (255)
.+.++...+.+++..++.+|+|+ |....++.++.++++....+.....++. . +... .+..++...+.+
T Consensus 312 ~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G 391 (477)
T TIGR01301 312 MLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILG 391 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhh
Confidence 33445555667788889999985 6666777777776666665443111000 0 0001 245555666667
Q ss_pred HHHhhhhhhhhhhhccccchh--cHHHHHHHHHHHHHHhhhhhhhHHHh----hhcCCCchhHHHHHHHHHHHHHH-HHh
Q 045196 142 MAASTAFDVMYIYCVELFPTN--VRNIAVSFLRQALMLGASVSPLLVVV----GRMSPSLSFLVFGALSIFSGVLS-LWL 214 (255)
Q Consensus 142 ~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~g~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~ 214 (255)
+.....+++.++++++..|.+ ..|..+|+.|.+..+..++..+..+. ...+....+.+.++..+++++.. +.+
T Consensus 392 i~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~ 471 (477)
T TIGR01301 392 IPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILL 471 (477)
T ss_pred HHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhC
Confidence 777778899999999999954 44889999999988887766655542 22233445666677777777765 456
Q ss_pred ccCC
Q 045196 215 PETK 218 (255)
Q Consensus 215 ~e~~ 218 (255)
|+++
T Consensus 472 ~~~~ 475 (477)
T TIGR01301 472 PRPR 475 (477)
T ss_pred CCCC
Confidence 7654
No 196
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.93 E-value=2.6e-08 Score=82.61 Aligned_cols=156 Identities=13% Similarity=0.023 Sum_probs=91.4
Q ss_pred eeeecccCchhHHHHHHHH---HHHHHHHHHHHHHHhh----cchhH-HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCc
Q 045196 59 QLNVGNLNFNLYFSVALNA---LMEIPAVVIGTVLLSF----TNRRL-LLSRSAYVAGSASILCTLFSNNNNNKGKGGGS 130 (255)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr----~grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (255)
.++...+|.+......+.. +...+..++.|+++|| +|||+ .++++....+++.+++...+... .....
T Consensus 24 ~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~----~~~~~ 99 (437)
T TIGR00792 24 FFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFS----ATGKL 99 (437)
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCC----cchHH
Confidence 3445567777766655554 5667788999999998 67744 56677777776666665542000 00011
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcccc-chhcHHHHHHHHHHHHHHhhhhhhhHHH-----hh----hcCCCchhHHH
Q 045196 131 WPQLIIEGVGFMAASTAFDVMYIYCVELF-PTNVRNIAVSFLRQALMLGASVSPLLVV-----VG----RMSPSLSFLVF 200 (255)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~p~~~~-----~~----~~~~~~~~~~~ 200 (255)
+..++..++...+.+.......++.+|+. ++++|++..++.+....+|+.+++.+.+ .. ..++...+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 22222333334444444456678888887 5688999999888887777765544432 11 12344455666
Q ss_pred HHHHHHHHHHH-HHhccCC
Q 045196 201 GALSIFSGVLS-LWLPETK 218 (255)
Q Consensus 201 ~~~~~~~~~~~-~~~~e~~ 218 (255)
+++.++..++. +..||++
T Consensus 180 ~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHHcCCEecC
Confidence 66655554443 3456643
No 197
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.93 E-value=3.3e-08 Score=80.98 Aligned_cols=175 Identities=15% Similarity=0.132 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHHHh--hhee--eeecc--cCchh---HHHHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHH
Q 045196 38 AKRLIMVMTAGFGVGFVY--YGIQ--LNVGN--LNFNL---YFSVALNALMEIPAVVIGTVLLSFTNR-RLLLSRSAYVA 107 (255)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~--~~~~--~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~gr-r~~l~~~~~~~ 107 (255)
|+.+++..+..+.+.+.+ +.+. .|+.. .+.+. .+.....+++..++++++|+...|.+. |+.++.+.+++
T Consensus 33 wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~ 112 (488)
T KOG2325|consen 33 WRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIA 112 (488)
T ss_pred hHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHH
Confidence 455555555555544332 2222 23333 23322 223334567888899999999999885 66678888888
Q ss_pred HHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHH-
Q 045196 108 GSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLV- 186 (255)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~- 186 (255)
.+++++....... +....+++++..++.+++.+. ....-.|+++..-.+.|.++++.......+|.++||.+.
T Consensus 113 ~~g~llY~~l~~~-----~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~ 186 (488)
T KOG2325|consen 113 IIGNLLYLALAYV-----PNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQL 186 (488)
T ss_pred HHHHHHHHHHHhc-----ccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHH
Confidence 8888777433211 122556777777777765544 478889999987777888888888776666666666544
Q ss_pred ---HhhhcC-----------CCchhHHHHHHHHHHHHHH-HHhccCC
Q 045196 187 ---VVGRMS-----------PSLSFLVFGALSIFSGVLS-LWLPETK 218 (255)
Q Consensus 187 ---~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~~~~e~~ 218 (255)
++...+ +..+-++.+++.++.+++. ++++|..
T Consensus 187 ~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 187 AFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred HHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 322211 2234566667777666655 4556643
No 198
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.93 E-value=2.7e-08 Score=83.19 Aligned_cols=124 Identities=20% Similarity=0.088 Sum_probs=84.3
Q ss_pred ccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHH
Q 045196 64 NLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVG 140 (255)
Q Consensus 64 ~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (255)
..|.++...+ ...+++.+++..+.+++.+|++.|+++.++.++.++..+..........-.....+.+......++.
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~ 361 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIA 361 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHH
Confidence 4555544433 3455777888899999999999999999988887776644322110000000001222333344455
Q ss_pred HHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 141 FMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 141 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
.++.+........++.+..|++.+++.+++.....++|..+++.+.+
T Consensus 362 ~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg 408 (468)
T TIGR00788 362 EVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGV 408 (468)
T ss_pred HHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666777899999999999999999999999999999998776
No 199
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.92 E-value=2.6e-08 Score=75.31 Aligned_cols=129 Identities=15% Similarity=0.087 Sum_probs=86.1
Q ss_pred Hhhheeeeec----ccCchhHHHHHHH---HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 045196 54 VYYGIQLNVG----NLNFNLYFSVALN---ALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGK 126 (255)
Q Consensus 54 ~~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (255)
..|.+..|.+ .++.+......+. .++..+ .++.|.+.|++|.+.++.++.....+....+...... ..+
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~---~i~ 92 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSG---RIP 92 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC---ccC
Confidence 4444444444 4566655444443 344444 4888999999999999999999888888777665311 111
Q ss_pred CCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 127 GGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
..+.|.+.+..++.+.+.+...........+.||. .||++.|+.-....+++.+-..+..
T Consensus 93 ~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~ 152 (250)
T PF06813_consen 93 SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYS 152 (250)
T ss_pred ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHH
Confidence 23455655555555554444555666667788985 6999999999999988877666655
No 200
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.90 E-value=3e-09 Score=86.77 Aligned_cols=172 Identities=16% Similarity=0.200 Sum_probs=121.5
Q ss_pred hhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHH---HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 045196 31 LWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFS---VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVA 107 (255)
Q Consensus 31 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~ 107 (255)
++.++.....++..+++-+...++++.+-..+++.+....+. ..+.-.+.++.-++.+++.+|+|+-+++.+++.+.
T Consensus 367 ~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~ 446 (618)
T KOG3762|consen 367 VFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACN 446 (618)
T ss_pred HhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHH
Confidence 455554333233333333334444444434455555433222 23334577888899999999999999999998888
Q ss_pred HHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHH-HHhhhhhhhHH
Q 045196 108 GSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQAL-MLGASVSPLLV 186 (255)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~g~~~~p~~~ 186 (255)
.+-.+.+.+. .+.|..+.+-++.+...+..|...-+|++...|++.|.++.++..... .+|-.+|.++.
T Consensus 447 ~~Rf~~~S~L----------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIG 516 (618)
T KOG3762|consen 447 VGRFLYYSYL----------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIG 516 (618)
T ss_pred HHHHHHHHHh----------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhh
Confidence 8888777777 689999889999999999999999999999999999999999987665 46666777777
Q ss_pred Hh--hhcCCCchhHHHHHHHHHHHHHHH
Q 045196 187 VV--GRMSPSLSFLVFGALSIFSGVLSL 212 (255)
Q Consensus 187 ~~--~~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
+. ...+....|.++++.+++.+++..
T Consensus 517 G~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 517 GFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred hhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 63 344556677777777776655443
No 201
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.89 E-value=3e-08 Score=77.68 Aligned_cols=132 Identities=11% Similarity=0.102 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhc
Q 045196 77 ALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCV 156 (255)
Q Consensus 77 ~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
..+..+++..+|.++|++|||+.+.++....++..++-... .++..+.++..+.+++.++ .|...++-.
T Consensus 123 ~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~s----------pnf~~L~~f~~l~~~g~gg-~pv~~~~yl 191 (528)
T KOG0253|consen 123 FLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGAS----------PNFASLCVFRALWGFGVGG-LPVDSAIYL 191 (528)
T ss_pred HhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCC----------CCeehhhHHHHHHhccCCC-ccHhHHHHH
Confidence 35778899999999999999999998888877776665554 4556667777788877777 688899999
Q ss_pred cccchhcHHHHHHHHHHHHHHhhhhhhhHHH--hhhcCCCchhHHHHHHHHHHHHHHHHhccCCCC
Q 045196 157 ELFPTNVRNIAVSFLRQALMLGASVSPLLVV--VGRMSPSLSFLVFGALSIFSGVLSLWLPETKNA 220 (255)
Q Consensus 157 e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (255)
|..|...|..-+-.. ++..+|.+....+.- ....+|++.++.......+.+.+.+++||+.+.
T Consensus 192 e~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf 256 (528)
T KOG0253|consen 192 EFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRF 256 (528)
T ss_pred HhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcch
Confidence 999999998766555 666677776666553 234456666666666666666777888987554
No 202
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.88 E-value=1.4e-07 Score=74.75 Aligned_cols=148 Identities=17% Similarity=0.087 Sum_probs=97.5
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHH--HHhhheeeeecccCchhHHHH---HHHHHHHHHHHHHHHHHHhhcchhHHHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVG--FVYYGIQLNVGNLNFNLYFSV---ALNALMEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
...+++++|+++. -.+..+++.+.. ...+...+..+..|.+..... ...-.+.++|.+++.++..|+...+.+.
T Consensus 228 ~~~~l~~~~~~~~-gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~La 306 (422)
T COG0738 228 GLSSLFQNKHLRL-GVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLA 306 (422)
T ss_pred hHHHHHhChHHHH-HHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 5788999998554 444444444432 222222232333554443332 2233577889999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhh
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 181 (255)
+..++..+.++...+. ++. ..+...++.+++.+..+|..++...+..|.+ ....|..-....+|+++
T Consensus 307 f~a~~~ill~~~~~l~----------~g~-v~~~~l~~ig~F~simfPTIfslal~~l~~~--ts~~s~~l~maivGGAi 373 (422)
T COG0738 307 FYALIAILLLLAVALI----------GGV-VALYALFLIGLFNSIMFPTIFSLALKNLGEH--TSVGSGLLVMAIVGGAI 373 (422)
T ss_pred HHHHHHHHHHHHHHHh----------cCh-HHHHHHHHHHHHhHHHHHHHHHHHHhccCcc--ccccceeeeeheecchH
Confidence 8887777777777766 343 3444555666778889999999999999933 33334444455688899
Q ss_pred hhhHHHh
Q 045196 182 SPLLVVV 188 (255)
Q Consensus 182 ~p~~~~~ 188 (255)
.|.+.|+
T Consensus 374 iP~l~G~ 380 (422)
T COG0738 374 IPPLQGV 380 (422)
T ss_pred HHHHHHH
Confidence 9999885
No 203
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.83 E-value=2.4e-07 Score=73.52 Aligned_cols=108 Identities=10% Similarity=-0.113 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 73 VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 73 ~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
++..-.+..++++..+++.+|+|+|+-++.+..++++.+.+..-.. ...++...++..++.+.+.+.......
T Consensus 54 qfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa-------~~~~y~~FL~~lFila~Gi~~LetaaN 126 (422)
T COG0738 54 QFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAA-------SSKSYGFFLVALFILASGIGLLETAAN 126 (422)
T ss_pred HHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhh-------hhhhHHHHHHHHHHHHhhhHHHHhccc
Confidence 3334457788899999999999999999999999999888775332 113445666666777777777788888
Q ss_pred hhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 153 IYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
.++..+.|++..+.-+.+.+.++.+|++++|.+.+
T Consensus 127 p~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~ 161 (422)
T COG0738 127 PYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGS 161 (422)
T ss_pred hHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 99999999988888899999999999999999887
No 204
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.81 E-value=3.4e-07 Score=74.86 Aligned_cols=168 Identities=14% Similarity=0.013 Sum_probs=96.4
Q ss_pred HHHHHHHHHH----HHhhheeeeecccCchhHHHHHHH-----HHHHHHHHHHH-HHHHhhcchhHHHHHHHHHHHH-HH
Q 045196 43 MVMTAGFGVG----FVYYGIQLNVGNLNFNLYFSVALN-----ALMEIPAVVIG-TVLLSFTNRRLLLSRSAYVAGS-AS 111 (255)
Q Consensus 43 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-g~l~dr~grr~~l~~~~~~~~~-~~ 111 (255)
..+..++.+. +.....+.|+++.|.+......+. .+..++..++. ++..||+|||+..++...+... +.
T Consensus 5 ~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~ 84 (390)
T TIGR02718 5 TLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACL 84 (390)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHH
Confidence 3344455553 333445677888888876665542 22334444444 4467778988886555533222 22
Q ss_pred HHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--h
Q 045196 112 ILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--G 189 (255)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~ 189 (255)
..+..... ............+...++.....+....+..|..+.+.++...+.......+|.++++...++ .
T Consensus 85 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~ 158 (390)
T TIGR02718 85 ASLALVGP------DVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG 158 (390)
T ss_pred HHHHcCCc------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222210 001122222333333344445556677778888888877877777777667888888766552 4
Q ss_pred hcCCCchhHHHHHHHHHHHHHHHHhcc
Q 045196 190 RMSPSLSFLVFGALSIFSGVLSLWLPE 216 (255)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~e 216 (255)
..+++.+|++.+++.++..+..++++|
T Consensus 159 ~~gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 159 KFGQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 457778888888877766655555543
No 205
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.79 E-value=6.7e-08 Score=79.83 Aligned_cols=134 Identities=20% Similarity=0.262 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhh
Q 045196 76 NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYC 155 (255)
Q Consensus 76 ~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
.++..++.+...|.++||+|||..+.+....+.+..+.+.+. .+|..+ ..-+ ..+.....+...+++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~-----------~~~~~~-~~~l-~g~~~~~~s~~~a~v 137 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ-----------GYWFFL-LLGL-SGGFSAIFSVGFAYV 137 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH-----------HHHHhh-hccc-ccchhhhhhhhhhhe
Confidence 456677888999999999999999999888887776666654 233332 1111 222345567889999
Q ss_pred ccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHH-HHhccCCCCCc
Q 045196 156 VELFPTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLS-LWLPETKNAPL 222 (255)
Q Consensus 156 ~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~ 222 (255)
+|+...+.|....|+.+.....+..++|.+.+. ...+....+.+..+..++..+.. +++||+...+.
T Consensus 138 adis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~ 207 (463)
T KOG2816|consen 138 ADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKE 207 (463)
T ss_pred eeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccc
Confidence 999999999999999999888899999998873 34556667777777777776655 46788765543
No 206
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.75 E-value=2.6e-07 Score=77.63 Aligned_cols=114 Identities=7% Similarity=0.005 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhH-------HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhh
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRL-------LLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAAST 146 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (255)
.+..+..++..++.+++.||++||+ -+.++.++.+++.+.+........+.+...+.|..+...++.+.+...
T Consensus 316 ~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~ 395 (489)
T PRK10207 316 ALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELF 395 (489)
T ss_pred hHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 3444556677788899999999886 366677766665544321110001111123455566666677777777
Q ss_pred hhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 147 AFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 147 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
..+....++.+..|++.++.++|+.+....+|+.++..+..
T Consensus 396 ~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~ 436 (489)
T PRK10207 396 ISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVAT 436 (489)
T ss_pred HhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999888888888877664
No 207
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.74 E-value=5.1e-07 Score=73.77 Aligned_cols=159 Identities=18% Similarity=0.111 Sum_probs=89.9
Q ss_pred HHHHHHHhhheeeeecccCchhHHHHHHHH---HHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHHhcccCCC
Q 045196 48 GFGVGFVYYGIQLNVGNLNFNLYFSVALNA---LMEIPAVVIGTVLLSFTN-RRLLLSRSAYVAGSASILCTLFSNNNNN 123 (255)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr~g-rr~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (255)
++......-.++.|+++.|.+....+.+.+ +..+++.++.|+++||.+ +|+++.+..++.++..+.....
T Consensus 15 f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~------ 88 (400)
T PF03825_consen 15 FFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS------ 88 (400)
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh------
Confidence 333333333346788888888777666554 567788999999999986 5667766666666655444443
Q ss_pred CCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhh-----HHHhhh-cCCCchh
Q 045196 124 KGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPL-----LVVVGR-MSPSLSF 197 (255)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~-----~~~~~~-~~~~~~~ 197 (255)
.+.+.++...++..++.....|+.-++..+.... ++.-.|-...++.+|-+++.. +.+... ......+
T Consensus 89 ----~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~ 162 (400)
T PF03825_consen 89 ----SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIF 162 (400)
T ss_pred ----ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHH
Confidence 4556555555555555555556666666665542 233344444445444444322 222221 1222345
Q ss_pred HHHHHHHHHHHHHHHHhccCC
Q 045196 198 LVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~e~~ 218 (255)
++.++..++.....+.+|+++
T Consensus 163 ~i~~~~~~ll~~~~l~lp~~~ 183 (400)
T PF03825_consen 163 YIAAILSLLLAGFALFLPKTP 183 (400)
T ss_pred HHHHHHHHHHHHHHHhCCCCc
Confidence 555555544444456677664
No 208
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.73 E-value=3.4e-07 Score=76.59 Aligned_cols=169 Identities=17% Similarity=0.079 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHH---hhheeeeec-ccCchhHHHHHHHHHHHHH--HHHHHHHHHhhcc-----hhHHHHHHHHHHHH
Q 045196 41 LIMVMTAGFGVGFV---YYGIQLNVG-NLNFNLYFSVALNALMEIP--AVVIGTVLLSFTN-----RRLLLSRSAYVAGS 109 (255)
Q Consensus 41 ~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~g~l~dr~g-----rr~~l~~~~~~~~~ 109 (255)
..+....++.+++. ......++. .+|.+....+...++..++ ..+++|.++||++ ||+.++++.++..
T Consensus 28 ~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~- 106 (468)
T TIGR00788 28 LAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGS- 106 (468)
T ss_pred HHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHH-
Confidence 34444455655544 222223344 4688877765555554443 4577999999997 6777777766553
Q ss_pred HHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHH---HHHHHHHHHHhhhhhhhHH
Q 045196 110 ASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIA---VSFLRQALMLGASVSPLLV 186 (255)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~---~~~~~~~~~~g~~~~p~~~ 186 (255)
+........ ..+......++.++..++.+......-++..|..+ +.+..+ .++.+....+|.++++.+.
T Consensus 107 ~~~~~~l~~-------~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~ 178 (468)
T TIGR00788 107 AILYGLLPG-------KVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLG 178 (468)
T ss_pred HHHHHhccc-------ccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHH
Confidence 111111111 11222233335566666666677888999999998 444432 3344444457888888888
Q ss_pred Hh--hhcCCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 187 VV--GRMSPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 187 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
+. ...++...|++.+++.++..+..++++|.+
T Consensus 179 G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 179 GPLLDKTLTRILFLITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred HHHHHhcCcchHHHHHHHHHHHHHHHHHhccccc
Confidence 74 334677788888777777755556778864
No 209
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.68 E-value=4.9e-06 Score=68.65 Aligned_cols=173 Identities=6% Similarity=-0.127 Sum_probs=81.2
Q ss_pred cchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeec-ccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHH
Q 045196 26 NKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVG-NLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~ 101 (255)
.++++++++|.++...+...+............+.+.. ..+.+....... ...+.++++.+.+.+.+|.++++...
T Consensus 209 ~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~ 288 (413)
T PRK15403 209 RDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIW 288 (413)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHH
Confidence 35677888887665444433333332222222343433 345655443332 23455566666666654444333332
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh--hhhccccchhcHHHHHHHHHHHHHHhh
Q 045196 102 RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY--IYCVELFPTNVRNIAVSFLRQALMLGA 179 (255)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~p~~~r~~~~~~~~~~~~~g~ 179 (255)
....+..+..+++...... ..+..+..++..++.+++.+...+... ++.+... .+|++.++.+.....+.
T Consensus 289 ~~~~~~~ig~~l~~~~~~~-----~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~---~~G~a~a~~~~~~~~~~ 360 (413)
T PRK15403 289 RAVPIQLVGLALLIVGNLL-----WPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNL---PKGTVSASLNMVILMVM 360 (413)
T ss_pred HHHHHHHHHHHHHHHHHHH-----ccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCC---CCcHHHHHHHHHHHHHH
Confidence 2222222222221111000 002222233444444555555555555 3322222 36888888888877777
Q ss_pred hhhhhHHHhh-hcCCCchhHHHHHHHHH
Q 045196 180 SVSPLLVVVG-RMSPSLSFLVFGALSIF 206 (255)
Q Consensus 180 ~~~p~~~~~~-~~~~~~~~~~~~~~~~~ 206 (255)
..++...++. ..+...++...++++.+
T Consensus 361 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 361 AVSVEIGRWLWFNGGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 7777776642 33455556555544443
No 210
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.68 E-value=1.7e-06 Score=73.32 Aligned_cols=105 Identities=9% Similarity=-0.028 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhH-HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRL-LLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
...+++..+|.++.|.+..+++|-| .++++...+.+++-++.... .++....+.+.++.+++.++......
T Consensus 356 ~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~--------~~n~~~~i~~~~l~g~giG~~~~~~~ 427 (599)
T PF06609_consen 356 SPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR--------PDNKNAAIAFLVLAGFGIGGILVPAI 427 (599)
T ss_pred hhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHcc--------CCCcchHHHHHHHHHHhHHHHHHHHH
Confidence 4455667778888999998888744 44566655554444444431 12333445666777777777767777
Q ss_pred hhhccccchhcHHHHHHHHHHHHHHhhhhhhhHH
Q 045196 153 IYCVELFPTNVRNIAVSFLRQALMLGASVSPLLV 186 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~ 186 (255)
...+-..|++.-+++.|+..+...+|+.++..+.
T Consensus 428 ~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 428 VIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred HeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 7777788999999999999888888776654433
No 211
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.66 E-value=1.1e-05 Score=63.67 Aligned_cols=147 Identities=15% Similarity=-0.034 Sum_probs=90.4
Q ss_pred cccCchhHHHHHHH---HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHH
Q 045196 63 GNLNFNLYFSVALN---ALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGV 139 (255)
Q Consensus 63 ~~~~~~~~~~~~~~---~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (255)
+++|.+......+. .+...+...+.|.++||+|||+.-+..+++.+++++.... ++.+.+++..++
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~-----------~~~~~L~~GRvl 130 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS-----------SNYPVLLLGRVL 130 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-----------cccHHHHHHHHH
Confidence 45666543332222 2355667788899999999999988888888888764322 467788888888
Q ss_pred HHHHHhhhhhhhhhhh-cc----ccchhcHHHHHHHHHHH-HHHhhhhhhhHHH----hhhcCCCchhHHHHHHHHHHHH
Q 045196 140 GFMAASTAFDVMYIYC-VE----LFPTNVRNIAVSFLRQA-LMLGASVSPLLVV----VGRMSPSLSFLVFGALSIFSGV 209 (255)
Q Consensus 140 ~~~~~~~~~~~~~~~~-~e----~~p~~~r~~~~~~~~~~-~~~g~~~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~ 209 (255)
++...+..++..-+|. .| -+|.+..+..++...+. +.+-++.+..+.. ....+...||.....+..++.+
T Consensus 131 gGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~ 210 (354)
T PF05631_consen 131 GGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAV 210 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHH
Confidence 8887777666554443 22 25655555555544422 2333333333333 2333456788887777777766
Q ss_pred HHH-HhccCCCC
Q 045196 210 LSL-WLPETKNA 220 (255)
Q Consensus 210 ~~~-~~~e~~~~ 220 (255)
++. ..+|..+.
T Consensus 211 ~I~~~W~ENyg~ 222 (354)
T PF05631_consen 211 LILKTWPENYGD 222 (354)
T ss_pred HHHhcccccCCC
Confidence 654 34665443
No 212
>PRK09669 putative symporter YagG; Provisional
Probab=98.62 E-value=5.6e-07 Score=74.96 Aligned_cols=126 Identities=8% Similarity=-0.035 Sum_probs=75.5
Q ss_pred hheeeeecccCchhHHHHHHHHH---HHHHHHHHHHHHHhh----cchh-HHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 045196 56 YGIQLNVGNLNFNLYFSVALNAL---MEIPAVVIGTVLLSF----TNRR-LLLSRSAYVAGSASILCTLFSNNNNNKGKG 127 (255)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~l~dr----~grr-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (255)
|...++.+.+|.+......+..+ ...+..++.|+++|| +||| +.++++....+++..++...+.. +..
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~----~~~ 106 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDF----GAT 106 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCC----Ccc
Confidence 33344556678887776666554 455677999999998 6774 55556666666666554443200 000
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhhhhcccc-chhcHHHHHHHHHHHHHHhhhhhhhH
Q 045196 128 GGSWPQLIIEGVGFMAASTAFDVMYIYCVELF-PTNVRNIAVSFLRQALMLGASVSPLL 185 (255)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~p~~ 185 (255)
...+...+..++...+.........++.+|+. ++++|++..++......+|+.+++.+
T Consensus 107 ~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~ 165 (444)
T PRK09669 107 GKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVI 165 (444)
T ss_pred hHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122222222333334445556678889987 55779988888887777777666543
No 213
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.60 E-value=5.4e-06 Score=65.17 Aligned_cols=166 Identities=13% Similarity=0.021 Sum_probs=107.0
Q ss_pred hHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecc----cCchhHHHHHH---HHHHHHHHHHHHHHHHhhc-chhHH
Q 045196 28 NESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGN----LNFNLYFSVAL---NALMEIPAVVIGTVLLSFT-NRRLL 99 (255)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~-grr~~ 99 (255)
-..++|+|.-|.. .+.+-.+++.+|...-|++. .|.+...+..+ ..+..++.++....+.+|. .+|+.
T Consensus 201 ~~~vw~~~~aW~v----tLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~ 276 (395)
T COG2807 201 VRKVWRSPLAWQV----TLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPL 276 (395)
T ss_pred ccccccCchhHHH----HHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchH
Confidence 3457888764443 33444566677766666654 46666665544 4457778889999999975 57777
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccch-hcHHHHHHHHHHHHHHh
Q 045196 100 LSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPT-NVRNIAVSFLRQALMLG 178 (255)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g 178 (255)
.+.....+.+..+.+.+.+ ....+.. .++.+++.++.+++....+.+-.+. ++-+.-.|+.+.++.+-
T Consensus 277 ~~~~~~~~l~G~~G~~~~P--------~~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYll 345 (395)
T COG2807 277 VVLALLLMLVGLVGLLLAP--------GQLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLL 345 (395)
T ss_pred HHHHHHHHHHHHHHHHHhh--------hhHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHH
Confidence 7777776666666666652 1222222 3566667778888888888877654 44566778888888999
Q ss_pred hhhhhhHHHhhh---cCCCchhHHHHHHHHHHH
Q 045196 179 ASVSPLLVVVGR---MSPSLSFLVFGALSIFSG 208 (255)
Q Consensus 179 ~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~ 208 (255)
+.++|++.|+.+ .+|..+...++...++..
T Consensus 346 Aa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 346 AAFGPWLFGFLHDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred HhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHH
Confidence 999999999532 234444444444444333
No 214
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.60 E-value=1.5e-06 Score=73.00 Aligned_cols=121 Identities=8% Similarity=-0.122 Sum_probs=72.9
Q ss_pred eeecccCchhHHHHHHHHH---HHHHHHHHHHHHHh----hcch-hHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCch
Q 045196 60 LNVGNLNFNLYFSVALNAL---MEIPAVVIGTVLLS----FTNR-RLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSW 131 (255)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~l~d----r~gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (255)
++....|.+....+.+..+ ...+..++.|+++| |+|| |+.++++...++++..++...+ +.+.....+
T Consensus 32 yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p----~~~~~~~~~ 107 (473)
T PRK10429 32 YYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAH----LFEGTAQYV 107 (473)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCC----CCCccHHHH
Confidence 3445567777666655544 55567788999999 5688 5566667776666655553321 000000011
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcccc-chhcHHHHHHHHHHHHHHhhhhhhh
Q 045196 132 PQLIIEGVGFMAASTAFDVMYIYCVELF-PTNVRNIAVSFLRQALMLGASVSPL 184 (255)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~g~~~~p~ 184 (255)
...+..++...+.........++.+|+. ++++|.+..++-..++.+|+.+.+.
T Consensus 108 ~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~ 161 (473)
T PRK10429 108 FVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAG 161 (473)
T ss_pred HHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222223334445556667778899998 5888999888876666666555443
No 215
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.58 E-value=3.1e-07 Score=74.31 Aligned_cols=170 Identities=11% Similarity=-0.038 Sum_probs=81.2
Q ss_pred cChhHHHHHHHHHHHHHHHHHHhhheeeeecc-cCchhHHHHHHHHH---HHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 045196 33 GTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGN-LNFNLYFSVALNAL---MEIPAVVIGTVLLSFTNRRLLLSRSAYVAG 108 (255)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~g~l~dr~grr~~l~~~~~~~~ 108 (255)
|++.+++.....+..++..+...-..+.|+++ .|.+....+.+.++ ..++..++.|.++||+|.||-++.......
T Consensus 5 ~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 5 KNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILL 84 (412)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHH
Confidence 45555554444444444444444445678875 78887777666554 566778899999999996665444332222
Q ss_pred H--HHHHH-HHhcccCCCCCCCCCchHHHHH-HHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhh
Q 045196 109 S--ASILC-TLFSNNNNNKGKGGGSWPQLII-EGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPL 184 (255)
Q Consensus 109 ~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~ 184 (255)
+ ..+.. .+.+.. ..+.+...+. .+..++...+..++.-+++.+.. +..+.-.|=...++.+|.+++..
T Consensus 85 ~l~~pff~~v~~pll------~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~ 156 (412)
T PF01306_consen 85 LLFGPFFIYVFGPLL------QSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASL 156 (412)
T ss_dssp HTCHHHHHHTHHHHH------HTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHH
Confidence 1 11111 111100 0122211111 11111112222244433333221 22334456667788888888888
Q ss_pred HHHh-hhcCCCchhHHHHHHHHHHHHH
Q 045196 185 LVVV-GRMSPSLSFLVFGALSIFSGVL 210 (255)
Q Consensus 185 ~~~~-~~~~~~~~~~~~~~~~~~~~~~ 210 (255)
+.|. ...+....+++..+..++..++
T Consensus 157 ~~G~L~~i~p~~~fwi~s~~~~il~ll 183 (412)
T PF01306_consen 157 LAGILFNINPNIIFWIASAAAIILLLL 183 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhheeeeeCccHHHHHHHHHHHHHHHH
Confidence 8773 3333445566555444433333
No 216
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.45 E-value=6.8e-05 Score=60.25 Aligned_cols=152 Identities=9% Similarity=0.020 Sum_probs=102.1
Q ss_pred ccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeeccc-----CchhHHH---HHHHHHHHHHHHHHHHHHHh-hcc
Q 045196 25 DNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNL-----NFNLYFS---VALNALMEIPAVVIGTVLLS-FTN 95 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~g~l~d-r~g 95 (255)
...++++..+|+.++.+...++..+..++.- ..++.+ |.++..+ +.+.+.+.++|....|++.. |.+
T Consensus 198 ~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD----~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~ 273 (403)
T PF03209_consen 198 REAWRQVWASPQARRFFVFLFLGTLAFFMQD----VILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLG 273 (403)
T ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHhhH----HHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4567788888886665554444444333222 223333 4444333 34455677888888887766 678
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHH
Q 045196 96 RRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQAL 175 (255)
Q Consensus 96 rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~ 175 (255)
+++...+++..+.++..++.... ...+.+.+....++.+++.+.......+.+.++.+++..|..+|.-....
T Consensus 274 ~~~~a~~G~~~~~~~f~lii~a~-------~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQ 346 (403)
T PF03209_consen 274 KKRTAALGCLLGALAFALIILAG-------PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQ 346 (403)
T ss_pred chHHHHHHHHHHHHHHHHHHHHH-------hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHH
Confidence 88888888888888777666553 22467777777788888777777777888889998888899998887777
Q ss_pred HHhhhhhhhHHH
Q 045196 176 MLGASVSPLLVV 187 (255)
Q Consensus 176 ~~g~~~~p~~~~ 187 (255)
.++..++..+.+
T Consensus 347 A~A~Glg~~~GG 358 (403)
T PF03209_consen 347 AIARGLGTFLGG 358 (403)
T ss_pred HHHHHHHHHHHH
Confidence 666666655554
No 217
>PTZ00207 hypothetical protein; Provisional
Probab=98.45 E-value=5e-06 Score=70.83 Aligned_cols=177 Identities=10% Similarity=-0.053 Sum_probs=101.5
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeeccc-Cc--hh--HH-HHHHHHHHHHHHHHHHHHHHhhcchh---
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNL-NF--NL--YF-SVALNALMEIPAVVIGTVLLSFTNRR--- 97 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~--~~-~~~~~~~~~~~~~~~~g~l~dr~grr--- 97 (255)
++++.+++..+|..++..++.........+....+.+.+ |. +. .. ...+.++++.+|.+..|+++...-||
T Consensus 345 t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~ 424 (591)
T PTZ00207 345 TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAE 424 (591)
T ss_pred hHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccc
Confidence 677777777655433333333222211111122222333 32 11 11 23567788889999998887322222
Q ss_pred -----HHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHH
Q 045196 98 -----LLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLR 172 (255)
Q Consensus 98 -----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 172 (255)
++.+....++.+..+++.+.. ....+.+..++.+++.|..+++....++|+|. +.-|+-.-+..
T Consensus 425 ~r~prt~~l~~~~~~~~~~lll~~~~----------p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~ 493 (591)
T PTZ00207 425 DRVPITIALFIPSVCIITMLTLFLTL----------PKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCF 493 (591)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHC----------CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHh
Confidence 222222223445555555442 21456677778888899999999999999999 77777666666
Q ss_pred HHHHHhhhhh-hhHHH-h-hh-------------cCCCchhHHHHHHHHHHHHHHHHh
Q 045196 173 QALMLGASVS-PLLVV-V-GR-------------MSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 173 ~~~~~g~~~~-p~~~~-~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
...-+|+.+- -.+.| + ++ .....+|++.+++++++.+....+
T Consensus 494 ~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 494 LGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 6666666543 23333 1 11 123457899999998888776544
No 218
>PRK11462 putative transporter; Provisional
Probab=98.44 E-value=1.3e-05 Score=67.07 Aligned_cols=127 Identities=10% Similarity=-0.060 Sum_probs=79.6
Q ss_pred hheeeeecccCchhHHHHHHHHH---HHHHHHHHHHHHHhh----cchh-HHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 045196 56 YGIQLNVGNLNFNLYFSVALNAL---MEIPAVVIGTVLLSF----TNRR-LLLSRSAYVAGSASILCTLFSNNNNNKGKG 127 (255)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~l~dr----~grr-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (255)
|.+.++....|.++...+.+..+ .-.+.-++.|+++|| +||| +.++++.+..+++.+++...+. . +..
T Consensus 31 ~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~-~---s~~ 106 (460)
T PRK11462 31 YMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPD-L---SMN 106 (460)
T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCC-C---Ccc
Confidence 33334456678888777666555 445677999999996 5775 4555666777776655544320 0 000
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhhhhccccc-hhcHHHHHHHHHHHHHHhhhhhhhHH
Q 045196 128 GGSWPQLIIEGVGFMAASTAFDVMYIYCVELFP-TNVRNIAVSFLRQALMLGASVSPLLV 186 (255)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~p~~~ 186 (255)
.......+..++...+.........++.+|+.+ .++|++..++-..++.+|+.+++.+.
T Consensus 107 ~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~ 166 (460)
T PRK11462 107 GKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLM 166 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001122222233344555555677888999986 68899999999888888877665553
No 219
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.40 E-value=3.4e-05 Score=62.48 Aligned_cols=110 Identities=15% Similarity=0.042 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCch--HHHHHHHHHHHHHhhhh
Q 045196 71 FSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSW--PQLIIEGVGFMAASTAF 148 (255)
Q Consensus 71 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 148 (255)
+...+..+..++..+.+.|+.||+|-|....++..+.++...+=....... -++..+ +......+.....-...
T Consensus 83 wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~----v~~~f~~~l~~~Gq~iaa~Aq~Fim 158 (480)
T KOG2563|consen 83 WLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPF----VPPLFRRPLTHTGQSIAAAAQPFIL 158 (480)
T ss_pred HHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCcc----ccccchhhhhHHhHHHHHHhhhHhh
Confidence 444566678888999999999999999999999988888776654442100 002223 22233333333222222
Q ss_pred hhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhh
Q 045196 149 DVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPL 184 (255)
Q Consensus 149 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~ 184 (255)
.+..-+..-+||+++|+++..+..+.+.+|..++-+
T Consensus 159 ~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 159 GLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred ccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 333445666799999999999988887666654433
No 220
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.39 E-value=4.4e-05 Score=63.94 Aligned_cols=138 Identities=15% Similarity=0.195 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHH-HHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRLLL-SRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
.+..+...+..++.|-++|+-|+||.+ .+...++.+++.++.+.. ....+...++.++...+.........
T Consensus 77 sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~--------~~~~~~~~~l~iia~v~~~~~~vfyn 148 (477)
T PF11700_consen 77 SISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVS--------PGQWWLALVLFIIANVGYEASNVFYN 148 (477)
T ss_pred HHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhC--------cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556667788899999998866554 455555556666666652 23445666666677777777778889
Q ss_pred hhhccccchhcH--------------------------HHHHHHHHHHHHHhhhhhhhHHHh---hh-------cCCCch
Q 045196 153 IYCVELFPTNVR--------------------------NIAVSFLRQALMLGASVSPLLVVV---GR-------MSPSLS 196 (255)
Q Consensus 153 ~~~~e~~p~~~r--------------------------~~~~~~~~~~~~~g~~~~p~~~~~---~~-------~~~~~~ 196 (255)
++++|+.+++.+ ++..+.....+++|+++.-.+.-. .. ...+..
T Consensus 149 a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~ 228 (477)
T PF11700_consen 149 AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA 228 (477)
T ss_pred HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH
Confidence 999999988877 899999999999988765444321 11 112334
Q ss_pred hHHHHHHHHHHHHH-HHHhccCCC
Q 045196 197 FLVFGALSIFSGVL-SLWLPETKN 219 (255)
Q Consensus 197 ~~~~~~~~~~~~~~-~~~~~e~~~ 219 (255)
+.+.++..++..+- .+++|+.++
T Consensus 229 ~~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 229 FLIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCC
Confidence 55555544443333 345676544
No 221
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.39 E-value=3.7e-06 Score=67.86 Aligned_cols=188 Identities=8% Similarity=-0.036 Sum_probs=102.6
Q ss_pred CccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccC---chhHHHHHHHHHHHHHHHHHHHHHHhhcch-hHH
Q 045196 24 SDNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLN---FNLYFSVALNALMEIPAVVIGTVLLSFTNR-RLL 99 (255)
Q Consensus 24 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr-r~~ 99 (255)
-..+.+++++++++....++..+.....+..++.+..-+..-+ .+......+..++.++++.+.|.+.||.+. |..
T Consensus 255 f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~ 334 (480)
T KOG2563|consen 255 FPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLT 334 (480)
T ss_pred HHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 3457788899887443332222222222222222221111112 234445556667888899999999999875 344
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhh
Q 045196 100 LSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGA 179 (255)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~ 179 (255)
.++......++...+..... .....+.+.....+.+++..+..|+..-+..|..-+..-++..|+.+..+.+.+
T Consensus 335 ~~v~~~~~~v~~~~l~~~t~------~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~ 408 (480)
T KOG2563|consen 335 TLVLYLFALVGTLMLLTCTL------FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFG 408 (480)
T ss_pred HHHHHHHHHHHHHHHHHhhc------cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHH
Confidence 44444443333222222210 112333444455556666677778888888888644455777899999988888
Q ss_pred hhhhhHHHhh--hcC---CCch-hHHHHHHHHHHHHHHHHhccC
Q 045196 180 SVSPLLVVVG--RMS---PSLS-FLVFGALSIFSGVLSLWLPET 217 (255)
Q Consensus 180 ~~~p~~~~~~--~~~---~~~~-~~~~~~~~~~~~~~~~~~~e~ 217 (255)
++-+++.+.. ..+ +..+ -+.....+++.+++..++++.
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 409 VILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred HHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 8777777632 222 1222 333444444555555555443
No 222
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.38 E-value=8.7e-05 Score=61.71 Aligned_cols=151 Identities=9% Similarity=0.030 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHHhhheeeeecccCc-----hh-HHHH--HHHHH-HHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 045196 38 AKRLIMVMTAGFGVGFVYYGIQLNVGNLNF-----NL-YFSV--ALNAL-MEIPAVVIGTVLLSFTNRRLLLSRSAYVAG 108 (255)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~--~~~~~-~~~~~~~~~g~l~dr~grr~~l~~~~~~~~ 108 (255)
+++++......++..+.|+..-..-..+.. .. .... ....+ ..++..++.+++++|++|++++-+......
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~ 85 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFL 85 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHH
Confidence 455666777777777777766433333222 11 1111 11112 233347888999999999998877666666
Q ss_pred HHHHHHHHhcccCCCC-CCC---------C-----------CchHHHHHHHHHHHHHhhhhh-hhhhhhccccchhcHHH
Q 045196 109 SASILCTLFSNNNNNK-GKG---------G-----------GSWPQLIIEGVGFMAASTAFD-VMYIYCVELFPTNVRNI 166 (255)
Q Consensus 109 ~~~~~~~~~~~~~~~~-~~~---------~-----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~ 166 (255)
....+..+......+. +++ . ..|...++.+..-.......+ +.|.+++|++..++-.+
T Consensus 86 ~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakR 165 (472)
T TIGR00769 86 GFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKR 165 (472)
T ss_pred HHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 5555554442211111 000 0 133333333344444444555 88999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhHHHh
Q 045196 167 AVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 167 ~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
-.++....+++|.++++.+..+
T Consensus 166 fy~l~~~ganlg~i~sg~~~~~ 187 (472)
T TIGR00769 166 FYALFGLGANVALIFSGRTIKY 187 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987763
No 223
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.37 E-value=4.3e-05 Score=64.26 Aligned_cols=141 Identities=12% Similarity=0.108 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHhh-cchhHHH--HHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHH
Q 045196 70 YFSVALNALMEIPAVVIGT----VLLSF-TNRRLLL--SRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFM 142 (255)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~g----~l~dr-~grr~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (255)
.....+.++.-++..++.. ++.|| .+.+... .++.++.+++...+.+...+. +.....+.|..+...++.++
T Consensus 315 ~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~-~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 315 IWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFA-DAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCccCHHHHHHHHHHHHH
Confidence 3333444444444444433 34443 2223333 667777766666555421111 11112466666777777777
Q ss_pred HHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhh--hcCCCchhHHHHHHHHHHHHHH
Q 045196 143 AASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVVG--RMSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 143 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
+-....|...++..+..|++.||+.+|+......+|..+++.+.... ..++...+...++.+++..++.
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 77788899999999999999999999999999999999988877632 2234444555555555544444
No 224
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.32 E-value=1.4e-06 Score=72.23 Aligned_cols=129 Identities=13% Similarity=-0.044 Sum_probs=79.0
Q ss_pred hheeeeecccCchhHHHHHHHHHHHH---HHHHHHHHHHh----hcchhHH-HHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 045196 56 YGIQLNVGNLNFNLYFSVALNALMEI---PAVVIGTVLLS----FTNRRLL-LSRSAYVAGSASILCTLFSNNNNNKGKG 127 (255)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~l~d----r~grr~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (255)
|...++.+..|.++.....+..+..+ +..++.|+++| |+|||+. ++++....+++.+++....+.. ....
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~--~~~~ 100 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAG--LSFT 100 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccch--hhhh
Confidence 33344556668887777666655444 45578999999 7887655 4567777777666665441000 0000
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhhhhccccc-hhcHHHHHHHHHHHHHHhhhhhhhHH
Q 045196 128 GGSWPQLIIEGVGFMAASTAFDVMYIYCVELFP-TNVRNIAVSFLRQALMLGASVSPLLV 186 (255)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~p~~~ 186 (255)
.......+..++...+.........++.+|+.+ +++|....+.-..+..+|+++...+.
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~ 160 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLA 160 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 011122333334455556666778899999997 46899999888888877775444433
No 225
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.27 E-value=2.8e-05 Score=67.36 Aligned_cols=130 Identities=14% Similarity=0.074 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 045196 80 EIPAVVIGTVLLSF-TNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVEL 158 (255)
Q Consensus 80 ~~~~~~~~g~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (255)
.-+..+++|+++|+ +||++.+.++.++..+...++.+... .... +.......++.+.+...+.++.-+...+...|.
T Consensus 36 ~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~~-~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdq 113 (654)
T TIGR00926 36 CYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSSG-HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQ 113 (654)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-cccc-cchHHHHHHHHHHHHHhhccccccCchhhhHhh
Confidence 34567889999996 69999999998888877766655321 0000 000112234445555666677778888889998
Q ss_pred cchh---cHHHHHHHHHHHHHHhhhhhhhHHHhhh--c-------CCCchhHHHHHHHHHHHHHH
Q 045196 159 FPTN---VRNIAVSFLRQALMLGASVSPLLVVVGR--M-------SPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 159 ~p~~---~r~~~~~~~~~~~~~g~~~~p~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~ 211 (255)
++.+ .|...+.+.++..++|+++++.+..+.. . ++...|.+.+++.+++.++.
T Consensus 114 f~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 114 FEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHH
Confidence 8753 3677888889999999999988877432 1 24445666666666555443
No 226
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.27 E-value=3.7e-05 Score=65.06 Aligned_cols=114 Identities=10% Similarity=-0.052 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHH----HHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhh
Q 045196 73 VALNALMEIPAVVIG----TVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAF 148 (255)
Q Consensus 73 ~~~~~~~~~~~~~~~----g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (255)
..+..+..++..++. +++.+|++..+.+.++.++.+++.+.+.....+.+. +..-+.+..+...++.+++.....
T Consensus 322 ~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~-~~~vs~~~~~~~~~l~~~ge~~~~ 400 (500)
T PRK09584 322 QALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFAND-AGIVSVNWLIASYGLQSIGELMIS 400 (500)
T ss_pred HHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHHHHHHHHHh
Confidence 334444444444444 555556666677888888888887776655322111 111234455666667777777788
Q ss_pred hhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 149 DVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 149 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
|....++.+..|++.||+.+|+......+|+.++..+.+
T Consensus 401 p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 401 GLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887666666666555543
No 227
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.26 E-value=2.6e-06 Score=67.64 Aligned_cols=181 Identities=12% Similarity=-0.028 Sum_probs=98.4
Q ss_pred CCCccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeec-ccC---chhHHHHHHHHHHHHHHHHHHHHHHhhcc--
Q 045196 22 NNSDNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVG-NLN---FNLYFSVALNALMEIPAVVIGTVLLSFTN-- 95 (255)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-- 95 (255)
..+..++++++++|+.+...........+..+.--.++.|+. ++. +.......-.++...+++.+.|.+.||++
T Consensus 257 ~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~ 336 (464)
T KOG3764|consen 257 TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHL 336 (464)
T ss_pred cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCch
Confidence 344557889999987443322222222233333333333322 222 22333444456778889999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhh---hhhhhccccchh---cHHHHHH
Q 045196 96 RRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDV---MYIYCVELFPTN---VRNIAVS 169 (255)
Q Consensus 96 rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~e~~p~~---~r~~~~~ 169 (255)
|-.....+.+..++++....+. ++...+++-.+..++..+...+. ...+..|.-..+ .-|...+
T Consensus 337 ~wl~~~~gl~~~G~~~~~iP~~----------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVya 406 (464)
T KOG3764|consen 337 RWLLSLGGLATVGVSSGPIPFA----------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYA 406 (464)
T ss_pred hHHHHHHHHHHHHHHhchhHhh----------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHH
Confidence 5333444555555444444444 22222222222222222222232 333333333333 4578888
Q ss_pred HHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHHHHH
Q 045196 170 FLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGVLSL 212 (255)
Q Consensus 170 ~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 212 (255)
+......+|.+++|.+.+. ...+..|...+.++..++-.-+..
T Consensus 407 Iad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ 451 (464)
T KOG3764|consen 407 IADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLL 451 (464)
T ss_pred HHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 8888889999999999984 444566666666666666544443
No 228
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.21 E-value=9.4e-05 Score=60.95 Aligned_cols=125 Identities=11% Similarity=-0.030 Sum_probs=81.2
Q ss_pred hheeeeecccCchhHHHHHHHHHHH---HHHHHHHHHHHhh----cch-hHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 045196 56 YGIQLNVGNLNFNLYFSVALNALME---IPAVVIGTVLLSF----TNR-RLLLSRSAYVAGSASILCTLFSNNNNNKGKG 127 (255)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~l~dr----~gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (255)
|.+.++....|.++...+.+..++. .+.-++.|.++|| +|| |+.++++.+..++.+.++...+.. +..
T Consensus 34 yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~----~~~ 109 (467)
T COG2211 34 YLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDF----SMT 109 (467)
T ss_pred HHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCc----ccC
Confidence 3333445667888888777766544 4567899999996 565 456667777777777666655310 001
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhhhhccccc-hhcHHHHHHHHHHHHHHhhhhhhh
Q 045196 128 GGSWPQLIIEGVGFMAASTAFDVMYIYCVELFP-TNVRNIAVSFLRQALMLGASVSPL 184 (255)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~g~~~~p~ 184 (255)
.......+...+...+.+.......++.+|+.+ +++|.+-.+.-..+..+|+++...
T Consensus 110 ~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~ 167 (467)
T COG2211 110 GKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAV 167 (467)
T ss_pred cchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222233334444555666677778889999975 577999999888888877654433
No 229
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.18 E-value=1.4e-05 Score=64.82 Aligned_cols=106 Identities=17% Similarity=0.099 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcch-------hHHHHH-HH---HHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHH
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNR-------RLLLSR-SA---YVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFM 142 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~gr-------r~~l~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (255)
.+...+..+|.+++|.++||+.| .+.--+ +. .++..+.++.... ...+.+..+++.+++..
T Consensus 290 ~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~--------~~~s~~~~~il~~~g~~ 361 (493)
T KOG1330|consen 290 GVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAF--------TSSSMIFGLILFLVGET 361 (493)
T ss_pred hHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhh--------hhHHHHHHHHHHHHHHH
Confidence 44556778899999999998432 221111 11 1111111111111 11233344444444444
Q ss_pred HHhhhhhhhhhhhccccchhcHHHHHHHHHHHHH-HhhhhhhhHHH
Q 045196 143 AASTAFDVMYIYCVELFPTNVRNIAVSFLRQALM-LGASVSPLLVV 187 (255)
Q Consensus 143 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~p~~~~ 187 (255)
.....++...-+..|+.|++.|.++.++...+.. +|.+-+|++.|
T Consensus 362 ~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivG 407 (493)
T KOG1330|consen 362 ISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVG 407 (493)
T ss_pred HHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceeh
Confidence 4444556666778889999999999999987775 45567776666
No 230
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.16 E-value=7.4e-05 Score=62.00 Aligned_cols=148 Identities=18% Similarity=0.191 Sum_probs=98.5
Q ss_pred ecccCchhHHHHHHHHHHHHH--HHHHHHHHHhhc-----chhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHH
Q 045196 62 VGNLNFNLYFSVALNALMEIP--AVVIGTVLLSFT-----NRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQL 134 (255)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~--~~~~~g~l~dr~-----grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (255)
...++.++.....+.++..++ ..++.|.++|-+ .||+-++++.++++++.+.+..... ...+.....
T Consensus 17 ~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~------~~~s~~~~~ 90 (433)
T PF03092_consen 17 KDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA------SESSAAIAV 90 (433)
T ss_pred HHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc------ccchhhhHH
Confidence 455778877777776666654 679999999975 3666667777777666666655531 012333444
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccc---chhcHHHHHHHHHHHHHHhhhhhhhHHHh--hhcCCCchhHHHHHHHHHHHH
Q 045196 135 IIEGVGFMAASTAFDVMYIYCVELF---PTNVRNIAVSFLRQALMLGASVSPLLVVV--GRMSPSLSFLVFGALSIFSGV 209 (255)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~e~~---p~~~r~~~~~~~~~~~~~g~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~ 209 (255)
++.++..++......+.-++..|.. |.+ |+.-.+.......+|++++..+.|. ...+....|.+.+++.++..+
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHH
Confidence 5555666666666677777888875 444 7788888888888899888887773 444566677777777666655
Q ss_pred HHHHh-cc
Q 045196 210 LSLWL-PE 216 (255)
Q Consensus 210 ~~~~~-~e 216 (255)
..+++ +|
T Consensus 170 ~~~~~~~e 177 (433)
T PF03092_consen 170 VALFLLEE 177 (433)
T ss_pred HHHHhhhh
Confidence 55444 44
No 231
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.13 E-value=0.00012 Score=51.36 Aligned_cols=106 Identities=6% Similarity=-0.053 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhh
Q 045196 71 FSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDV 150 (255)
Q Consensus 71 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
....+......+++++.+.+.+++|.|+.++++.+...+....... .+.+.++....+.+++.+..+..
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~-----------~~~~~l~~~s~l~G~~~a~lW~a 109 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY-----------PNSYTLYPASALLGFGAALLWTA 109 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHhhhhHHhhHh
Confidence 3334444556678888999999999999999998877654444322 24566777777888888888888
Q ss_pred hhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 151 MYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 151 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
...++.+...++.|++-.++.......+.++|.++..
T Consensus 110 qg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 110 QGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred hhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999998888777777666665543
No 232
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.10 E-value=0.00011 Score=59.04 Aligned_cols=123 Identities=15% Similarity=0.098 Sum_probs=77.0
Q ss_pred cCchhHHHHHHHHH--HHHHHHHHHHHHHhhcc-----hhHHHH-HHHHHHHHHHHHHHHhcccCCC--CCCCCCch---
Q 045196 65 LNFNLYFSVALNAL--MEIPAVVIGTVLLSFTN-----RRLLLS-RSAYVAGSASILCTLFSNNNNN--KGKGGGSW--- 131 (255)
Q Consensus 65 ~~~~~~~~~~~~~~--~~~~~~~~~g~l~dr~g-----rr~~l~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--- 131 (255)
++........+.++ ..-+..+..|+.+|+.+ ||..++ .+...+.....++.+....-.. .....+.+
T Consensus 10 L~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~ 89 (403)
T PF03209_consen 10 LGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGL 89 (403)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHH
Confidence 34444444444433 33457899999999988 776554 4444444433333332211111 01112222
Q ss_pred -HHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 132 -PQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 132 -~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
...+.+.+.+.+.........+++.|..|++.|+++.++.+..--+|.+++..+.+
T Consensus 90 ~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g 146 (403)
T PF03209_consen 90 ALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFG 146 (403)
T ss_pred HHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 23334445566666777888999999999999999999999998888888888877
No 233
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.96 E-value=0.00014 Score=60.39 Aligned_cols=144 Identities=19% Similarity=0.158 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc-cCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhh
Q 045196 75 LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSN-NNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYI 153 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
+.+++.++|..+......+..-|+++.++.++.++..+.-..... .+..- ..++.+..+.-.++........+-....
T Consensus 263 vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~-Gi~d~~f~lgd~~l~~~~~~i~~mP~lv 341 (433)
T PF03092_consen 263 VGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDL-GIPDQWFALGDTILEEVIGMIAFMPSLV 341 (433)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeee-CcCCeEEEEEhHHHHHHHHHHHHHHHHH
Confidence 344455666666665555667777777776665544443222110 00000 0112232233333444444444556677
Q ss_pred hhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhh-------hcC---CCchhHHHHHHHHHHHHHHHHhccCCC
Q 045196 154 YCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVVG-------RMS---PSLSFLVFGALSIFSGVLSLWLPETKN 219 (255)
Q Consensus 154 ~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~~e~~~ 219 (255)
+++|+.|+..-|+.+++...+.++|..++..+.... ... .+...++..++.++...+..++|+.++
T Consensus 342 l~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 342 LAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 899999999999999999999999888777766521 111 112233444445455555556776443
No 234
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.95 E-value=8.9e-05 Score=45.42 Aligned_cols=57 Identities=16% Similarity=0.144 Sum_probs=43.0
Q ss_pred HHHHHhhheeeeecccCchhHHHHHHHHH---HHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 045196 50 GVGFVYYGIQLNVGNLNFNLYFSVALNAL---MEIPAVVIGTVLLSFTNRRLLLSRSAYV 106 (255)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~l~dr~grr~~l~~~~~~ 106 (255)
..+..+-..+.+..+.|.+....+++.++ ..+++.+++|.++||++|++..+.....
T Consensus 15 ~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 15 ALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 33444444567788899998888777664 6778999999999999998887765544
No 235
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.94 E-value=0.0005 Score=54.46 Aligned_cols=138 Identities=11% Similarity=0.012 Sum_probs=99.5
Q ss_pred ecccCchhHHHHHHHHH---HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHH
Q 045196 62 VGNLNFNLYFSVALNAL---MEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEG 138 (255)
Q Consensus 62 ~~~~~~~~~~~~~~~~~---~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (255)
.++++.+.....+++.+ +.-..+++..++.+|+|.++.+.++.++.++..++=... +...++....
T Consensus 39 r~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-----------~~~~L~~gt~ 107 (395)
T COG2807 39 RQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-----------GLPLLFLGTL 107 (395)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-----------cHHHHHHHHH
Confidence 34556666666666554 445577889999999999999888887776665554332 3455666667
Q ss_pred HHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH-h-hh-cCCCchhHHHHHHHHHHHHHH
Q 045196 139 VGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV-V-GR-MSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~ 211 (255)
+.+.+.+..+.+...++-+-||.+ -+..+|++.....+++.+++.+.. + .. .+|+..+.+.+..++++.+++
T Consensus 108 l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~W 182 (395)
T COG2807 108 LAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIW 182 (395)
T ss_pred HHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 777778888889999999999976 577889988888888777766554 2 11 357778888888887776544
No 236
>PRK09848 glucuronide transporter; Provisional
Probab=97.91 E-value=0.00053 Score=57.30 Aligned_cols=123 Identities=7% Similarity=-0.149 Sum_probs=63.9
Q ss_pred ecccCchhHHHHHHH---HHHHHHHHHHHHHHHhhc----chhHHH-HHHHHHHHHHHHHHHHhcccCCCCCCCCCchHH
Q 045196 62 VGNLNFNLYFSVALN---ALMEIPAVVIGTVLLSFT----NRRLLL-SRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQ 133 (255)
Q Consensus 62 ~~~~~~~~~~~~~~~---~~~~~~~~~~~g~l~dr~----grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (255)
....|.+....+.+. .+...+..++.|+++||. |||+.. .++.+...+...++...+. . ..+....+..
T Consensus 36 ~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~ 112 (448)
T PRK09848 36 TDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPT-D--WSHSSKVVYA 112 (448)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcC-C--CCcchHHHHH
Confidence 344566665555444 356677889999999986 766644 5555555544444332210 0 0000111122
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhccccc-hhcHHHHHHHHHHHHH-----HhhhhhhhHHH
Q 045196 134 LIIEGVGFMAASTAFDVMYIYCVELFP-TNVRNIAVSFLRQALM-----LGASVSPLLVV 187 (255)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~-----~g~~~~p~~~~ 187 (255)
.....+...+.+...+...++..|+.+ .++|....++-...+. ++..++|.+..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~ 172 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKN 172 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222233344444555556666676654 4568776655543322 34445666554
No 237
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.88 E-value=0.0011 Score=54.87 Aligned_cols=113 Identities=15% Similarity=0.034 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhh---cchhHHHHHHHHHHHHHHHHHHHhcccCCCCCC--------CCCchHHHHHHHHHH
Q 045196 73 VALNALMEIPAVVIGTVLLSF---TNRRLLLSRSAYVAGSASILCTLFSNNNNNKGK--------GGGSWPQLIIEGVGF 141 (255)
Q Consensus 73 ~~~~~~~~~~~~~~~g~l~dr---~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 141 (255)
.+..+++++++....+.+.+| +||++.+.++..+..+.+++.....+.+.+..+ ..+.....+..++.+
T Consensus 285 ~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G 364 (461)
T KOG3098|consen 285 SIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLG 364 (461)
T ss_pred HHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHh
Confidence 345567888888888888865 688998888887777766666554433321111 112335555566667
Q ss_pred HHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHH
Q 045196 142 MAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLV 186 (255)
Q Consensus 142 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~ 186 (255)
+.-.......+.++...+| +.|..+.++.-+...+++.++-+..
T Consensus 365 ~~D~~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 365 FGDACFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred hHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHhhhh
Confidence 6667777888999999994 5688888888777777766554443
No 238
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.80 E-value=0.0014 Score=54.14 Aligned_cols=124 Identities=9% Similarity=-0.103 Sum_probs=76.6
Q ss_pred eecccCchhHHHHHH---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHH
Q 045196 61 NVGNLNFNLYFSVAL---NALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIE 137 (255)
Q Consensus 61 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
|..+.|.+....+.. .++.++.|+++..++.+|+|..+.-+++.....++..+............+..+...++...
T Consensus 284 yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi 363 (432)
T PF06963_consen 284 YLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGI 363 (432)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHH
Confidence 344447666555444 34567788999999999999888777776655544443332211110000011122333344
Q ss_pred HHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhh
Q 045196 138 GVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPL 184 (255)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~ 184 (255)
.+..++.-+.--...-++.|..|+++||+..|.-+...++...+.-.
T Consensus 364 ~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 364 ALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred HHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 44454444555567778999999999999999998888877665433
No 239
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.73 E-value=0.00074 Score=52.58 Aligned_cols=105 Identities=22% Similarity=0.153 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhh
Q 045196 75 LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIY 154 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (255)
...+...++.++.|.+.||+|||+.+..+.....+..+...+.. ....+..++.....++..+...+...++
T Consensus 47 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 47 AFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP--------NVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc--------cchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 34455566679999999999999877777765344434444431 1134455555555566666677889999
Q ss_pred hccccch-hcHHHHHHHHHH-HHHHhhhhhhhHHH
Q 045196 155 CVELFPT-NVRNIAVSFLRQ-ALMLGASVSPLLVV 187 (255)
Q Consensus 155 ~~e~~p~-~~r~~~~~~~~~-~~~~g~~~~p~~~~ 187 (255)
..|.+|. +.|+...+.... ...++..++|.+.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999997 668888888777 46677777776554
No 240
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.72 E-value=0.0079 Score=50.57 Aligned_cols=150 Identities=13% Similarity=0.062 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhee-----eeecccCchh--HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 045196 38 AKRLIMVMTAGFGVGFVYYGIQ-----LNVGNLNFNL--YFSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSA 110 (255)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~ 110 (255)
+++++...+++++..+.|..+- ..+...|... ..-....--+.++...+..+++++++|.+++-+........
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~f 102 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTILRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGF 102 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 5667777777777777666543 2222333321 11111111244556777889999999999887766665555
Q ss_pred HHHHHHhcccCCCC-CCCC--------------------CchHHHHHHHHHHHHHhhhhh-hhhhhhccccchhcHHHHH
Q 045196 111 SILCTLFSNNNNNK-GKGG--------------------GSWPQLIIEGVGFMAASTAFD-VMYIYCVELFPTNVRNIAV 168 (255)
Q Consensus 111 ~~~~~~~~~~~~~~-~~~~--------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~ 168 (255)
..+.++..+...+. +++. +.|...++.+..-.......+ +.|.+++|+++.++-.+-.
T Consensus 103 F~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfY 182 (491)
T PF03219_consen 103 FALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFY 182 (491)
T ss_pred HHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 55555442211110 0000 012222222222223333334 5799999999999999999
Q ss_pred HHHHHHHHHhhhhhhhHHH
Q 045196 169 SFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 169 ~~~~~~~~~g~~~~p~~~~ 187 (255)
++....+++|.+++..+..
T Consensus 183 pl~g~ganigli~sG~~~~ 201 (491)
T PF03219_consen 183 PLFGLGANIGLIFSGQLTS 201 (491)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999988877665
No 241
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.68 E-value=0.002 Score=51.49 Aligned_cols=116 Identities=15% Similarity=0.139 Sum_probs=73.9
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHHHHHhhcch-----hHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHH
Q 045196 63 GNLNFNLYFSVALNALMEIPAVVIGTVLLSFTNR-----RLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIE 137 (255)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr-----r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
..+|.++...+-+.....+.+.++.+.+..+..| +-.+..+...+.-..+++... .....+....
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~----------~~~~~l~~~s 359 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA----------RTPVVLYLGS 359 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc----------ccchhhhHHH
Confidence 4456665555444444445555555555554433 334444444444444444433 2333444445
Q ss_pred HHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh
Q 045196 138 GVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV 188 (255)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~ 188 (255)
.+..+......+....+.....|.+.||+..|+....+.++-++||.+.|.
T Consensus 360 ~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~ 410 (451)
T KOG2615|consen 360 TLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGV 410 (451)
T ss_pred HHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhhe
Confidence 555555555567788889999999999999999999999999999999973
No 242
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.65 E-value=0.0072 Score=49.98 Aligned_cols=150 Identities=11% Similarity=0.020 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHHHhhheeeeecccCch---hHHHHHH---HHH-HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Q 045196 38 AKRLIMVMTAGFGVGFVYYGIQLNVGNLNFN---LYFSVAL---NAL-MEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSA 110 (255)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~-~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~ 110 (255)
++.++-..+.+++..+.|+.+-..-.++... +....++ .-+ ++++..++..++++++.|.+++.+.......+
T Consensus 26 ~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~f 105 (509)
T COG3202 26 LKKFLPLALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGF 105 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 4556666667777777766554322222111 1111111 111 55667788889999999999887766666666
Q ss_pred HHHHHHhcccCCCC--------------CCCC--------CchHHHHHHHHHHHHHhhhhh-hhhhhhccccchhcHHHH
Q 045196 111 SILCTLFSNNNNNK--------------GKGG--------GSWPQLIIEGVGFMAASTAFD-VMYIYCVELFPTNVRNIA 167 (255)
Q Consensus 111 ~~~~~~~~~~~~~~--------------~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~ 167 (255)
.++.++......+. .+.. +.|...++..+.-.......+ +.|..+.|++..++-.+-
T Consensus 106 F~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRF 185 (509)
T COG3202 106 FALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRF 185 (509)
T ss_pred HHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhh
Confidence 66655543211111 1101 124444444444444444444 788999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhHHH
Q 045196 168 VSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 168 ~~~~~~~~~~g~~~~p~~~~ 187 (255)
.++.+..++++..++..+..
T Consensus 186 y~lf~l~~ni~lllsg~~~~ 205 (509)
T COG3202 186 YPLFGLGANISLLLSGEVTS 205 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999998887766665
No 243
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.65 E-value=0.00024 Score=56.37 Aligned_cols=59 Identities=17% Similarity=-0.046 Sum_probs=52.6
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 129 GSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
++...++..++.+.+.+...+....+++++.|++.+++.+++.+.+..+|.+++|++.+
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~ 67 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGG 67 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 45667777778888888888999999999999999999999999999999999999987
No 244
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.63 E-value=0.0019 Score=52.61 Aligned_cols=128 Identities=15% Similarity=0.088 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 045196 79 MEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVEL 158 (255)
Q Consensus 79 ~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (255)
..++.-+....+.|.+|-|++++++.+...+...++.+. ++.+.+-+.-+..+...+. -.+.++++=-.
T Consensus 53 Syl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~----------~sv~~mq~~q~~yg~~~a~-evay~sYiys~ 121 (412)
T PF01770_consen 53 SYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG----------TSVLAMQLMQFFYGLATAA-EVAYYSYIYSV 121 (412)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH----------CcHHHHHHHHHHHHHHHHH-HHHHHHHheee
Confidence 344556777889999999999999988877777776666 4666666666666654433 45666777777
Q ss_pred cchhcHHHHHHHHHHHHHHhhh----hhhhHHHhhhcCCCchhHHHHHHHHHHHHHHHHhccC
Q 045196 159 FPTNVRNIAVSFLRQALMLGAS----VSPLLVVVGRMSPSLSFLVFGALSIFSGVLSLWLPET 217 (255)
Q Consensus 159 ~p~~~r~~~~~~~~~~~~~g~~----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (255)
.|++.--++.+......-+|.+ +|.++.............+..+...++.++.+++|..
T Consensus 122 v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 122 VDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 7777666677666555544444 4444444332223233344444445556666778754
No 245
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.62 E-value=0.0082 Score=50.21 Aligned_cols=114 Identities=16% Similarity=0.146 Sum_probs=83.3
Q ss_pred cccCchhHHHH---HHHHHHHHHHHHHHH-HHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHH
Q 045196 63 GNLNFNLYFSV---ALNALMEIPAVVIGT-VLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEG 138 (255)
Q Consensus 63 ~~~~~~~~~~~---~~~~~~~~~~~~~~g-~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (255)
..++.+..... ...++...++.++.. .+...+|-|+.+..+.....+.....++. ...|.......
T Consensus 270 ~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~----------~~~w~~~~~~v 339 (463)
T KOG2816|consen 270 AKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA----------TETWMMFAAGV 339 (463)
T ss_pred eecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh----------ccchhhhHHHH
Confidence 34566544433 233445555665554 78888898888888888888888888777 46666555444
Q ss_pred HHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 139 VGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
+..+ .....+...+..+-+..++.+|+++++......+.++++|.+.+
T Consensus 340 ~~~~-~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~ 387 (463)
T KOG2816|consen 340 VVAL-AGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYG 387 (463)
T ss_pred HHHh-hcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHH
Confidence 4443 44556888899999999999999999999999999999988876
No 246
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.49 E-value=0.022 Score=48.15 Aligned_cols=119 Identities=8% Similarity=-0.100 Sum_probs=74.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcch--hH-----HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHH
Q 045196 68 NLYFSVALNALMEIPAVVIGTVLLSFTNR--RL-----LLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVG 140 (255)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~g~l~dr~gr--r~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (255)
++.+.+.+..+.-++.+++.+++=.|.+| |. =+.++.++++++.+.+.+....... +...+.+.++...++.
T Consensus 309 p~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~-~~~~s~~wl~~~~~~~ 387 (493)
T PRK15462 309 PTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAM-YGHSSLPLMVLGLAVM 387 (493)
T ss_pred CHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCcCHHHHHHHHHHH
Confidence 34454556666556666666666555532 21 1567777777777666543322111 1113444455555556
Q ss_pred HHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHH-HHhhhhhhhHHH
Q 045196 141 FMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQAL-MLGASVSPLLVV 187 (255)
Q Consensus 141 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~g~~~~p~~~~ 187 (255)
..+--...|+..+.++++.|++.||..+|...... .+|..++..+.+
T Consensus 388 t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~ 435 (493)
T PRK15462 388 GFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIAD 435 (493)
T ss_pred HHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666777999999999999999999999986643 566666666555
No 247
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.32 E-value=0.0033 Score=47.65 Aligned_cols=48 Identities=8% Similarity=-0.159 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhccc--cchhcHHHHHHHHHHHHHHh
Q 045196 131 WPQLIIEGVGFMAASTAFDVMYIYCVEL--FPTNVRNIAVSFLRQALMLG 178 (255)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~--~p~~~r~~~~~~~~~~~~~g 178 (255)
....++.++.+++.=+..++..-...|. ..++.-|.-.|+...++.+.
T Consensus 205 ~~f~I~~Fl~G~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 205 AFFYIFGFLAGFFLWGIQGVILNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHHHHHHHHHHHHHHhhhHHHhcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 3455666666666666667766666665 23444556566655555443
No 248
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.27 E-value=0.013 Score=47.72 Aligned_cols=102 Identities=10% Similarity=-0.024 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhH-HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRL-LLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
.+.++...+-.++.|.++|+.|+|| .+-+...+..++.+.+.+.+ +.+..+..+++..+...+.........
T Consensus 65 aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~-------~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 65 AIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIP-------PGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred HHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhC-------CCchHHHHHHHHHHHHHhcchhheehh
Confidence 3444555566788899999998655 44555555556666666663 112334555555566666677777888
Q ss_pred hhhccccchhcHHHHHHHHHHHHHHhhhhh
Q 045196 153 IYCVELFPTNVRNIAVSFLRQALMLGASVS 182 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~ 182 (255)
++++++.+++.-++..++....+.+|+.+.
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~ 167 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVIL 167 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHH
Confidence 999999998877877888777777777544
No 249
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.25 E-value=4.1e-05 Score=65.05 Aligned_cols=159 Identities=14% Similarity=0.121 Sum_probs=2.0
Q ss_pred eeecccCchhHHHHHHHH---HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCC------C------
Q 045196 60 LNVGNLNFNLYFSVALNA---LMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNN------K------ 124 (255)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~------~------ 124 (255)
.+-..++.+....+++.+ ++.++..++..++.+|..|-+.+-++.+++++..++..+-...... .
T Consensus 28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~ 107 (539)
T PF03137_consen 28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNS 107 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccc
Confidence 344456666666655544 5666777777788888767677778888888777765542211000 0
Q ss_pred ------------------------CCCCC----chHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHH
Q 045196 125 ------------------------GKGGG----SWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALM 176 (255)
Q Consensus 125 ------------------------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 176 (255)
..... .+++++..++.+++....+++..+|+-|..+++.-+.-.|+.+....
T Consensus 108 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~ 187 (539)
T PF03137_consen 108 SISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSI 187 (539)
T ss_dssp --------------------------------------------SSS---------------------------------
T ss_pred ccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhh
Confidence 00001 12344445566666677788999999999999988888888888777
Q ss_pred HhhhhhhhHHH-----h---h--h--------------cCCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 177 LGASVSPLLVV-----V---G--R--------------MSPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 177 ~g~~~~p~~~~-----~---~--~--------------~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
+|.++|=.+.+ + . . ..|+..|++.+++.++..+..+++|+..
T Consensus 188 lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~l 253 (539)
T PF03137_consen 188 LGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKL 253 (539)
T ss_dssp ------------------------------------------------------------------
T ss_pred ccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 76655433332 0 0 0 1245567777777777777666776543
No 250
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.19 E-value=0.051 Score=45.30 Aligned_cols=58 Identities=12% Similarity=0.075 Sum_probs=44.4
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHH
Q 045196 129 GSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLV 186 (255)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~ 186 (255)
+.+..++..++.++..|...+....+.++..++++|..+..+...+-.+|-.+|..+.
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666777778777777788888999999999998888887777777766665543
No 251
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.15 E-value=0.012 Score=51.49 Aligned_cols=85 Identities=5% Similarity=-0.106 Sum_probs=50.0
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeee-cccCchhHHHHHHHHH----HHHHHHHHHHHHHhhcc--hhHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNV-GNLNFNLYFSVALNAL----MEIPAVVIGTVLLSFTN--RRLL 99 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~g~l~dr~g--rr~~ 99 (255)
.++.++++|.++...+..++...........++.++ ..++.+......+.++ +.++|.+++|+++||++ .|+.
T Consensus 322 ~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~ 401 (633)
T TIGR00805 322 IIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKA 401 (633)
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHH
Confidence 356788888766555544444443332222233333 3567776665544432 45678999999999998 4556
Q ss_pred HHHHHHHHHHHH
Q 045196 100 LSRSAYVAGSAS 111 (255)
Q Consensus 100 l~~~~~~~~~~~ 111 (255)
+.++..+..+..
T Consensus 402 ~~~~~~~~~~~~ 413 (633)
T TIGR00805 402 AYFAICLSTLSY 413 (633)
T ss_pred HHHHHHHHHHHH
Confidence 665555555443
No 252
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.12 E-value=0.038 Score=45.15 Aligned_cols=60 Identities=13% Similarity=0.166 Sum_probs=47.6
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 128 GGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
.+.|..+++.+.-|...|..+...+..+.|-.|++.|-.++|.....-.+|-.++.++.-
T Consensus 333 psi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 333 PSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 356777777777787788888888888898899999999999998887777776666553
No 253
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.02 E-value=0.0077 Score=49.11 Aligned_cols=113 Identities=12% Similarity=-0.004 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchh---cHHHHHHHHHHH
Q 045196 98 LLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTN---VRNIAVSFLRQA 174 (255)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~ 174 (255)
+.++++.++..+..+++.+....... +.....+...+.+.+..++.++.=+...++..|.++++ .|.+.+.+.+..
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~-~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSL-PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC-------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchh-hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 45667777777777764443211100 01112345566666677778888899999999999765 467788888999
Q ss_pred HHHhhhhhhhHHHhhh--cCCCchhHHHHHHHHHHHHHH
Q 045196 175 LMLGASVSPLLVVVGR--MSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 175 ~~~g~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 211 (255)
.++|+++++.+.++.. .++...|.+.++..+++.+..
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHH
Confidence 9999999988777533 556666777776666665543
No 254
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.99 E-value=0.16 Score=42.45 Aligned_cols=121 Identities=12% Similarity=0.038 Sum_probs=78.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcchh-------HHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHH
Q 045196 67 FNLYFSVALNALMEIPAVVIGTVLLSFTNRR-------LLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGV 139 (255)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (255)
.++.+.+.+..+.-++..++..++..|.+|+ .-+.++..+++...+++........+.....+.+..+...++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 4456666666666677777777777775433 123455666666655555442222221233456666777777
Q ss_pred HHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 140 GFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 140 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
..++--...|+..+++..+.|+...+..++........+..++..+.+
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 777777777999999999999999999998887766666655544443
No 255
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.93 E-value=0.00021 Score=60.86 Aligned_cols=162 Identities=13% Similarity=0.062 Sum_probs=0.0
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHH-HHHhhheeeeecccCchhHHHHHHHHH----HHHHHHHHHHHHHhhcc--hhHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGV-GFVYYGIQLNVGNLNFNLYFSVALNAL----MEIPAVVIGTVLLSFTN--RRLL 99 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~l~dr~g--rr~~ 99 (255)
..+++++||.+....+..+.-.+.. ++..|..-+.-.+++.+...+..+.++ +..+|.+++|++++|+. .|..
T Consensus 297 ~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~ 376 (539)
T PF03137_consen 297 ALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGA 376 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHH
Confidence 3455666665333222222222222 233333334444566666666666554 55578899999999874 3444
Q ss_pred HHHHHHHHHHHHHH---HHH-----------hcccCC-------CC---------------------CCC--CCchHHHH
Q 045196 100 LSRSAYVAGSASIL---CTL-----------FSNNNN-------NK---------------------GKG--GGSWPQLI 135 (255)
Q Consensus 100 l~~~~~~~~~~~~~---~~~-----------~~~~~~-------~~---------------------~~~--~~~~~~~~ 135 (255)
+.+..+...+..+. ..+ ...+.. ++ +.+ ......++
T Consensus 377 ~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~ 456 (539)
T PF03137_consen 377 AKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLI 456 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHH
Confidence 43333333322222 111 011100 00 000 01122333
Q ss_pred HHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHH-HhhhhhhhHHHh
Q 045196 136 IEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALM-LGASVSPLLVVV 188 (255)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~p~~~~~ 188 (255)
..++..+..+.........+-..+|+++|+.|.|+.....+ +|.+-+|++.|.
T Consensus 457 ~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~ 510 (539)
T PF03137_consen 457 LLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGA 510 (539)
T ss_dssp ------------------------------------------------------
T ss_pred HHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhH
Confidence 33333333344444455556678899999999999988887 566788998873
No 256
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.71 E-value=0.028 Score=46.74 Aligned_cols=105 Identities=8% Similarity=-0.007 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhh
Q 045196 71 FSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDV 150 (255)
Q Consensus 71 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
....+......+.+++.+.+.|+.|.|+.++++........+...+. +.+..+....+.|++.+..+..
T Consensus 54 ~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-----------N~y~~yfssallG~Gaallw~G 122 (461)
T KOG3098|consen 54 YGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-----------NSYYLYFSSALLGFGAALLWTG 122 (461)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-----------chHHHHHHHHHhhhhHHheecc
Confidence 33455556677889999999999999999999988776666555443 5677777777778777777888
Q ss_pred hhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHH
Q 045196 151 MYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLV 186 (255)
Q Consensus 151 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~ 186 (255)
-..+++|..+.+.+.+..++.......+.++|..+.
T Consensus 123 qG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 123 QGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred cceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhh
Confidence 889999999999999999999888877777665544
No 257
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.64 E-value=0.0067 Score=52.91 Aligned_cols=144 Identities=18% Similarity=0.187 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc----cC------------C-------------------
Q 045196 78 LMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSN----NN------------N------------------- 122 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~----~~------------~------------------- 122 (255)
++..+...+..+..-|.-|-+++-++.+++++..++..+-.. +. .
T Consensus 143 ig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 222 (735)
T KOG3626|consen 143 IGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPS 222 (735)
T ss_pred cchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCC
Confidence 455556666777777877777788888888777776654311 10 0
Q ss_pred --CCC--CCCC--ch-HHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHh-----hh
Q 045196 123 --NKG--KGGG--SW-PQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVV-----GR 190 (255)
Q Consensus 123 --~~~--~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~-----~~ 190 (255)
+.. ...+ .| ++++..++.+.+....+++..+|+=|...++.-..-.|+.++...+|-++|=++.++ .+
T Consensus 223 ~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD 302 (735)
T KOG3626|consen 223 PENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVD 302 (735)
T ss_pred CCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeec
Confidence 000 0111 22 333344455656666778888999999988888888899988887777666554431 11
Q ss_pred c----------------CCCchhHHHHHHHHHHHHHHHHhccCCCCC
Q 045196 191 M----------------SPSLSFLVFGALSIFSGVLSLWLPETKNAP 221 (255)
Q Consensus 191 ~----------------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 221 (255)
. .||..|++.+++.++..+.++++|++..+.
T Consensus 303 ~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~ 349 (735)
T KOG3626|consen 303 FGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKS 349 (735)
T ss_pred cccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccc
Confidence 1 144457888888888888888888765543
No 258
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.61 E-value=0.0043 Score=50.80 Aligned_cols=148 Identities=10% Similarity=-0.017 Sum_probs=78.7
Q ss_pred eeecccCchhHHHHHHHH---HHHHHHHHHHHHHHhh----cchhHHHHH-HHHHHHHHHHHHHHhcccCC--CCCCCC-
Q 045196 60 LNVGNLNFNLYFSVALNA---LMEIPAVVIGTVLLSF----TNRRLLLSR-SAYVAGSASILCTLFSNNNN--NKGKGG- 128 (255)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr----~grr~~l~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~- 128 (255)
.++..+|..-.+..++.. +..++..++.|..+|| +||||.++. +....++..+++.+..-... .+++..
T Consensus 57 Pyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~ 136 (498)
T KOG0637|consen 57 PYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKP 136 (498)
T ss_pred HHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccc
Confidence 345566665444444333 3445567888999995 788776554 44455555555544321110 011111
Q ss_pred -CchH---HHHHHHHHHHHHhhhhhhhhhhhccccchhcHHH-HHHHHHHHHHHhhhhhhhHHHhhhcCCCchhHHHHHH
Q 045196 129 -GSWP---QLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNI-AVSFLRQALMLGASVSPLLVVVGRMSPSLSFLVFGAL 203 (255)
Q Consensus 129 -~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~-~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~~ 203 (255)
..+. .++...+.-+..-......-++..|+...+.+.+ +.+....+..+|+.++=.+..+.......+|.....+
T Consensus 137 ~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~~~~~~~Ft~~~~~ 216 (498)
T KOG0637|consen 137 VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLGLYKIFPFTLTTAC 216 (498)
T ss_pred cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccCceEEeehHHHHHH
Confidence 1111 1111222222333556778899999987666666 8888888888888776544433222233344444444
Q ss_pred HHHH
Q 045196 204 SIFS 207 (255)
Q Consensus 204 ~~~~ 207 (255)
.+.|
T Consensus 217 ~~~C 220 (498)
T KOG0637|consen 217 DLYC 220 (498)
T ss_pred HHHH
Confidence 4333
No 259
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.46 E-value=0.18 Score=40.90 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHh---hheeeeecccCchhHHHHHHHHHHHHH--HHHHHHHHHh-----hcchhHHHHH-HHHH
Q 045196 38 AKRLIMVMTAGFGVGFVY---YGIQLNVGNLNFNLYFSVALNALMEIP--AVVIGTVLLS-----FTNRRLLLSR-SAYV 106 (255)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~l~d-----r~grr~~l~~-~~~~ 106 (255)
++.+....+.+..+++.+ ..+++.++.-+.+-. ...+.++...+ --+++..++| |+|||+..++ +..+
T Consensus 30 ~~~illLl~LYllQGiP~GL~~~iP~lL~ak~vSyt-~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~l 108 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIGAIPLLLQAKGVSYT-SQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYL 108 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhhhhHHHhcCCCcchh-hhhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeeehHHH
Confidence 344555666666663221 155566664444432 22333444444 3478888888 9999886544 3334
Q ss_pred HHHHHHHHHHh
Q 045196 107 AGSASILCTLF 117 (255)
Q Consensus 107 ~~~~~~~~~~~ 117 (255)
.+..+..+...
T Consensus 109 lG~~mllLs~~ 119 (510)
T KOG3574|consen 109 LGLFMLLLSYL 119 (510)
T ss_pred HHHHHHHHhhC
Confidence 44444444443
No 260
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.21 E-value=0.054 Score=47.50 Aligned_cols=55 Identities=16% Similarity=0.237 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHH-HhhhhhhhHHHh
Q 045196 134 LIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALM-LGASVSPLLVVV 188 (255)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~~~p~~~~~ 188 (255)
++..++..+..+......+.++-..+|++.|+.++|+..++.+ +|.+-+|++.|+
T Consensus 590 l~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~ 645 (735)
T KOG3626|consen 590 LALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGA 645 (735)
T ss_pred HHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhh
Confidence 3334444444444445666777788999999999999988887 566788988873
No 261
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.07 E-value=0.15 Score=42.78 Aligned_cols=47 Identities=9% Similarity=0.152 Sum_probs=35.3
Q ss_pred HHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhh
Q 045196 138 GVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPL 184 (255)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~ 184 (255)
++..+.....+....+.-+.+..+..-|+-+.+.|+..++|+-.-..
T Consensus 413 ~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~ 459 (544)
T PF13000_consen 413 VLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRT 459 (544)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHH
Confidence 34444445555667777888888999999999999999999964433
No 262
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.79 E-value=0.064 Score=43.89 Aligned_cols=73 Identities=7% Similarity=0.109 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 045196 78 LMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVE 157 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (255)
+-.++..+++.++.+|+.-+.-..+...++.++.++.++. .+.+..++...+..+..+..-.....+ ..
T Consensus 70 ~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~----------~~v~~~l~Gv~las~ssg~GE~tfL~l-t~ 138 (402)
T PF02487_consen 70 LPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS----------PSVWVRLLGVVLASLSSGLGEVTFLSL-TH 138 (402)
T ss_pred HHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeec----------cchhHHHHHHHHHhhhhhhhHHHHHHH-HH
Confidence 4556677889999998763322333334444455555443 455666666666665554443333333 44
Q ss_pred ccch
Q 045196 158 LFPT 161 (255)
Q Consensus 158 ~~p~ 161 (255)
.+|+
T Consensus 139 ~y~~ 142 (402)
T PF02487_consen 139 FYGK 142 (402)
T ss_pred hcCc
Confidence 5654
No 263
>PRK03612 spermidine synthase; Provisional
Probab=95.65 E-value=1.3 Score=38.15 Aligned_cols=48 Identities=15% Similarity=-0.004 Sum_probs=27.0
Q ss_pred HHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 139 VGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
+.++..+...|+...+..+... +.-+...|-.+....+|+++|+++.+
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~ 166 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFP 166 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHH
Confidence 3344455555554444433222 11345567777777788887777766
No 264
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=95.26 E-value=0.2 Score=42.12 Aligned_cols=97 Identities=5% Similarity=-0.061 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhH--HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 75 LNALMEIPAVVIGTVLLSFTNRRL--LLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr~grr~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
+..+.+.++.+..|++-.++.|-. .+.+..++.+...+++... ++.|...+..++.........++..
T Consensus 306 ~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t----------~~Iw~~Y~~yvlf~~~y~flitia~ 375 (511)
T TIGR00806 306 ASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQS----------HDIWVLYVTYVLFRGIYQFLVPIAT 375 (511)
T ss_pred HHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcc----------cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455667888888866664432 3333344444444444444 6788777777777666666667767
Q ss_pred hhhccccchhcHHHHHHHHHHHHHHhhhh
Q 045196 153 IYCVELFPTNVRNIAVSFLRQALMLGASV 181 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~~ 181 (255)
.-++.....+.-|..+|+.++..-+-..+
T Consensus 376 ~~iA~~L~~~~~aLvFGiNtfvAl~LQti 404 (511)
T TIGR00806 376 FQIASSLSKELCALVFGINTFVATALKTI 404 (511)
T ss_pred HHHHHHhcccceEEEEecHHHHHHHHHHh
Confidence 76777776666677778777766544433
No 265
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.91 E-value=0.95 Score=37.36 Aligned_cols=91 Identities=8% Similarity=-0.045 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHH--HHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 75 LNALMEIPAVVIGTVLLSFTNRRLLLS--RSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr~grr~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
...+.+.++.+..|++-.++.+-.-+. +..++.+.+.+++... ++.|...+..++.........+...
T Consensus 293 ~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t----------~~Iwv~Y~~yIif~~~y~fliTiA~ 362 (412)
T PF01770_consen 293 ASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFT----------GNIWVCYAGYIIFRSLYMFLITIAS 362 (412)
T ss_pred HHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHh----------hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455667788888866666544333 3334444555555554 5667666555555544444444444
Q ss_pred hhhccccchhcHHHHHHHHHHHH
Q 045196 153 IYCVELFPTNVRNIAVSFLRQAL 175 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~ 175 (255)
.-++.....+.-+..+|+..+.+
T Consensus 363 ~qIA~~l~~e~yaLVFGiNtf~A 385 (412)
T PF01770_consen 363 FQIAKNLSEERYALVFGINTFVA 385 (412)
T ss_pred HHHHHhccccceeeeeeeHHHHH
Confidence 44444444444444455444433
No 266
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.54 E-value=0.26 Score=30.64 Aligned_cols=58 Identities=16% Similarity=0.061 Sum_probs=43.2
Q ss_pred eeecccCchhHHHHH---HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh
Q 045196 60 LNVGNLNFNLYFSVA---LNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLF 117 (255)
Q Consensus 60 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~ 117 (255)
...++.+.+...... ...++.++|.+...++.++.++++.+..+.+.+.+..+.+.+.
T Consensus 17 ~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 17 LMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555544433 3446888899999999988888888999999988888888876
No 267
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.41 E-value=1.7 Score=36.33 Aligned_cols=35 Identities=14% Similarity=-0.060 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Q 045196 72 SVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYV 106 (255)
Q Consensus 72 ~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~ 106 (255)
.++..++..++.+...|...||..|.+....+.+.
T Consensus 43 ygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~ 77 (432)
T PF06963_consen 43 YGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVV 77 (432)
T ss_pred HHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHH
Confidence 34455567777888889999999998876655443
No 268
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.33 E-value=0.86 Score=35.37 Aligned_cols=61 Identities=13% Similarity=-0.043 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhh
Q 045196 80 EIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVM 151 (255)
Q Consensus 80 ~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (255)
.++...+.|-++||.|||+.-+..++...++|+- - ....+..+.+...+++...+..++..
T Consensus 85 smLFGtivgSLaDkqGRKracvtycitYiLsCiT--K---------hSpqYkVLmVGR~LGGiaTsLLFSaF 145 (454)
T KOG4332|consen 85 SMLFGTIVGSLADKQGRKRACVTYCITYILSCIT--K---------HSPQYKVLMVGRVLGGIATSLLFSAF 145 (454)
T ss_pred HHHHHHHHHHHHhhhccccceeeehHHHHHHHHh--h---------cCCceEEEeehhhhhhHHHHHHHHHH
Confidence 3455667788999999999755444444333321 1 12344455666777776655554543
No 269
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=94.21 E-value=0.62 Score=37.96 Aligned_cols=159 Identities=10% Similarity=0.003 Sum_probs=76.6
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHHHHHHHHHHHHHHHHHHHHhhc--chhHHHHH--
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSVALNALMEIPAVVIGTVLLSFT--NRRLLLSR-- 102 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~~l~~-- 102 (255)
-++++++-|..+....+....-++....--..+.-+-+.|.+.-... +..+..++..++.++..-|+ |.|++...
T Consensus 257 ~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~Gv~ke~La-l~~v~~~plqI~l~~~~gk~ta~~~pl~~~lk 335 (510)
T KOG3574|consen 257 LLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEHGVPKEELA-LIAVPLVPLQIALPLYIGKWTAGPRPLNVFLK 335 (510)
T ss_pred HHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHcCCChhHhe-eeeeehhhHHHhhhhhheeecCCCCcchHHHH
Confidence 45667776665544444333333333333333333334555433332 22255566666666666655 33332211
Q ss_pred ---HHHHHHHHHHHHHHhcccCCC-CCC-CCCchHH-HHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHH
Q 045196 103 ---SAYVAGSASILCTLFSNNNNN-KGK-GGGSWPQ-LIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALM 176 (255)
Q Consensus 103 ---~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 176 (255)
.=++.+.+..++.+...+... +.. ...+..+ +..-.+...+....+....+..+.+.++..-|+-+.+.++..+
T Consensus 336 a~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsn 415 (510)
T KOG3574|consen 336 AVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSN 415 (510)
T ss_pred hhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHH
Confidence 011111122222222211111 111 1111111 1112233334444556677888999999999999999999999
Q ss_pred HhhhhhhhHH
Q 045196 177 LGASVSPLLV 186 (255)
Q Consensus 177 ~g~~~~p~~~ 186 (255)
+|+-.-..+.
T Consensus 416 LGg~wp~tv~ 425 (510)
T KOG3574|consen 416 LGGNWPGTVA 425 (510)
T ss_pred hcCCcHHHHH
Confidence 9986444433
No 270
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.21 E-value=1 Score=36.91 Aligned_cols=32 Identities=22% Similarity=0.185 Sum_probs=17.2
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhccccchhc
Q 045196 131 WPQLIIEGVGFMAASTAFDVMYIYCVELFPTNV 163 (255)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 163 (255)
+..++...+.+.+.+......+...++ +|.+.
T Consensus 118 ~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~y 149 (406)
T KOG1479|consen 118 LVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEY 149 (406)
T ss_pred HHHHHHHHHHhhhhhhhccchhhhhhc-CCHHH
Confidence 344444444455555555666666665 55544
No 271
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.78 E-value=0.0043 Score=47.84 Aligned_cols=99 Identities=12% Similarity=0.028 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhh
Q 045196 75 LNALMEIPAVVIGTVLLSF-TNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYI 153 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr-~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
+.+.-+++-++++|++.|| +|-|...++-+....+..++.+.-. ..+..|.+....++.+.+.-.....-..
T Consensus 87 vYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Gg-------i~~aFw~M~~GRF~FGIGgESlAVaQN~ 159 (459)
T KOG4686|consen 87 VYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGG-------ISHAFWTMLAGRFLFGIGGESLAVAQNK 159 (459)
T ss_pred eccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhch-------HHHHHHHHHhhheeeccCchhhhhhhcc
Confidence 3455677788999999997 5766554444444444444333211 1146778888888877655544455567
Q ss_pred hhccccchhcHHHHHHHHHHHHHHhhh
Q 045196 154 YCVELFPTNVRNIAVSFLRQALMLGAS 180 (255)
Q Consensus 154 ~~~e~~p~~~r~~~~~~~~~~~~~g~~ 180 (255)
++.-.|..++-+.++|+.....++|+.
T Consensus 160 yav~wFKGKELn~vfGlqlSvAR~Gst 186 (459)
T KOG4686|consen 160 YAVYWFKGKELNFVFGLQLSVARLGST 186 (459)
T ss_pred eeEEEecCccccchhhHHHHHHHhhce
Confidence 888889999999999999999999985
No 272
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.75 E-value=2.8 Score=35.67 Aligned_cols=86 Identities=10% Similarity=0.127 Sum_probs=45.2
Q ss_pred ccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeeccc-----CchhH--HHHHHHHHHHHHHHHHHHHHHhhcchh
Q 045196 25 DNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNL-----NFNLY--FSVALNALMEIPAVVIGTVLLSFTNRR 97 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~g~l~dr~grr 97 (255)
..+++.++++|..+...++.+......++.-+......... ..+.. ......++..++..++++.+.+|+|-+
T Consensus 270 ~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 270 KESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 35677788888755444444333344444433221111111 11111 112334555666668889999999988
Q ss_pred HHHHHHHHHHHHH
Q 045196 98 LLLSRSAYVAGSA 110 (255)
Q Consensus 98 ~~l~~~~~~~~~~ 110 (255)
....+.-+++.+.
T Consensus 350 ~~AlitPiv~lit 362 (491)
T PF03219_consen 350 TAALITPIVILIT 362 (491)
T ss_pred HHHHHhHHHHHHH
Confidence 8777654444433
No 273
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.72 E-value=0.57 Score=38.38 Aligned_cols=57 Identities=11% Similarity=0.096 Sum_probs=40.4
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhH
Q 045196 129 GSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLL 185 (255)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~ 185 (255)
+.+..+....+.++..|-..++...+.++-.|++++-.+-.+...+-..|-+.|..+
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 445666666777777777778889999999999888776666666555555555443
No 274
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=93.68 E-value=0.078 Score=44.75 Aligned_cols=63 Identities=17% Similarity=0.143 Sum_probs=44.2
Q ss_pred eeeeecccCchhHHHHHHHH---HHHHHHHHHHHHHHhhcchhHHHHHHH-HHHHHHHHHHHHhccc
Q 045196 58 IQLNVGNLNFNLYFSVALNA---LMEIPAVVIGTVLLSFTNRRLLLSRSA-YVAGSASILCTLFSNN 120 (255)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~l~dr~grr~~l~~~~-~~~~~~~~~~~~~~~~ 120 (255)
++.+..++|.++.....+++ +..+++.+++|+++||+.+|+.++++. +....+.+++.+++..
T Consensus 34 l~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv~P~ 100 (618)
T KOG3762|consen 34 LAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFVPPV 100 (618)
T ss_pred HHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeeccCc
Confidence 34566778888888777765 478889999999999998766555554 4444555555555443
No 275
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=93.45 E-value=1.7 Score=35.08 Aligned_cols=94 Identities=10% Similarity=-0.014 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhH--HHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhh
Q 045196 75 LNALMEIPAVVIGTVLLSFTNRRL--LLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMY 152 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr~grr~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (255)
+..+.+.++.++.|++--++.|.. ++.++....+.+.+.+... .+.|...+..++.........++..
T Consensus 279 v~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t----------~~Iw~~Ya~yvlfr~~y~l~itiA~ 348 (433)
T KOG3810|consen 279 VSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQT----------QHIWVCYAGYVLFRVIYQLTITIAT 348 (433)
T ss_pred HHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcc----------cceehhhhhHHHHHhhHhhhhhHHH
Confidence 344566678888888876666553 3344444444444444333 4566555555555444444445555
Q ss_pred hhhccccchhcHHHHHHHHHHHHHHh
Q 045196 153 IYCVELFPTNVRNIAVSFLRQALMLG 178 (255)
Q Consensus 153 ~~~~e~~p~~~r~~~~~~~~~~~~~g 178 (255)
.-+++....+.-|..+|+..++.-+-
T Consensus 349 ~~iA~nL~~e~~gLvFGiNTFvAl~l 374 (433)
T KOG3810|consen 349 FQIARNLSSELFGLVFGINTFVALIL 374 (433)
T ss_pred HHHHHhhhhhhheeeeehHHHHHHHH
Confidence 56666666666677777776655433
No 276
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.19 E-value=0.03 Score=44.46 Aligned_cols=112 Identities=12% Similarity=-0.073 Sum_probs=3.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCC---CCCCCCchHHHHHHHHHHHHHhhhhhh
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNN---KGKGGGSWPQLIIEGVGFMAASTAFDV 150 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
.+.+++-++|..+.++..-+..+++.+.+..+.-.+...++........+ ...-.+.+..++..++.++..|...+.
T Consensus 189 l~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~tl 268 (309)
T PF01733_consen 189 LLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLSTL 268 (309)
T ss_dssp ------------------------------------------------------------------------------HH
T ss_pred HHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhhhc
Confidence 34566777888877764322113333333333232222222221000000 001123445556666777777777788
Q ss_pred hhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhH
Q 045196 151 MYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLL 185 (255)
Q Consensus 151 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~ 185 (255)
...+.++..++++|..+..+...+-.+|-.+|..+
T Consensus 269 ~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 269 AMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp HH---------------------------------
T ss_pred eeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999998888877777666666665555443
No 277
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.38 E-value=1.5 Score=37.01 Aligned_cols=31 Identities=13% Similarity=0.188 Sum_probs=18.0
Q ss_pred HHHHHHHh-----hcchhHHHHHH-HHHHHHHHHHHH
Q 045196 85 VIGTVLLS-----FTNRRLLLSRS-AYVAGSASILCT 115 (255)
Q Consensus 85 ~~~g~l~d-----r~grr~~l~~~-~~~~~~~~~~~~ 115 (255)
+++..++| |+||||..++- -.++++.++.+.
T Consensus 53 lLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~ 89 (544)
T PF13000_consen 53 LLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLS 89 (544)
T ss_pred HhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHH
Confidence 56666666 78999876553 334444444433
No 278
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=92.36 E-value=6.7 Score=34.24 Aligned_cols=133 Identities=11% Similarity=0.012 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhcccCCCC------------CCCCCch---HHHHHHHHHHH
Q 045196 79 MEIPAVVIGTVLLSFT-NRRLLLSRSAYVAGSASILCTLFSNNNNNK------------GKGGGSW---PQLIIEGVGFM 142 (255)
Q Consensus 79 ~~~~~~~~~g~l~dr~-grr~~l~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~---~~~~~~~~~~~ 142 (255)
......+++++++|.+ ||-+.+.++.++..+...++.......... .+..+.. .+.....+...
T Consensus 85 ~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~ 164 (571)
T KOG1237|consen 85 TQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIAL 164 (571)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHhee
Confidence 3445678899999975 999999888887777665544432211100 0111111 12222222333
Q ss_pred HHhhhhhhhhhhhccccch----hcHH--HHHHHHHHHHHHhhhhhhhHHHhh--hcCCCchhHHHHHHHHHHHHHH
Q 045196 143 AASTAFDVMYIYCVELFPT----NVRN--IAVSFLRQALMLGASVSPLLVVVG--RMSPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 143 ~~~~~~~~~~~~~~e~~p~----~~r~--~~~~~~~~~~~~g~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
+.++.-+...++-+|-++. +.+. .-+.+.++..++|..++..+..+. ..+|...|.+..++..++.++.
T Consensus 165 G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 165 GAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIF 241 (571)
T ss_pred ccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHH
Confidence 4556667788888888882 2222 445555666667777666555433 3566667777777666665543
No 279
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.28 E-value=4.7 Score=33.89 Aligned_cols=83 Identities=10% Similarity=-0.005 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 045196 78 LMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVE 157 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (255)
+..++..+....+..|+..|.-+..+..+..+..++....... +.+.....+..++..++.+++.+...+..+++.+
T Consensus 56 v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~--~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~- 132 (437)
T TIGR00939 56 LPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKV--QTSETGFFVTTMASVVIINSGMALLQGSLFGLAG- 132 (437)
T ss_pred HHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeee--cCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc-
Confidence 3444455555566666665333344433322222222221110 1111112334444455556566666666677766
Q ss_pred ccchhc
Q 045196 158 LFPTNV 163 (255)
Q Consensus 158 ~~p~~~ 163 (255)
.+|++.
T Consensus 133 ~fp~~~ 138 (437)
T TIGR00939 133 VFPSTY 138 (437)
T ss_pred cCCHHH
Confidence 466543
No 280
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=91.26 E-value=0.36 Score=40.59 Aligned_cols=57 Identities=7% Similarity=0.141 Sum_probs=40.5
Q ss_pred hhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH--hhhcCCCchhHHHHHHHH
Q 045196 149 DVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV--VGRMSPSLSFLVFGALSI 205 (255)
Q Consensus 149 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~--~~~~~~~~~~~~~~~~~~ 205 (255)
....++-+|+..++.+++..++....+.++..++|++.. ....+....+.+.+...+
T Consensus 407 ~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l 465 (488)
T KOG2325|consen 407 TALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLL 465 (488)
T ss_pred chHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHH
Confidence 456678889998899999999999888888888888765 233445444444443333
No 281
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.92 E-value=8 Score=30.28 Aligned_cols=168 Identities=16% Similarity=0.078 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHhhheeeeecccCchh-----HHHHHHHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHHHHH
Q 045196 41 LIMVMTAGFGVGFVYYGIQLNVGNLNFNL-----YFSVALNALMEIPAVVIGTVLLSFTNR--RLLLSRSAYVAGSASIL 113 (255)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~l~dr~gr--r~~l~~~~~~~~~~~~~ 113 (255)
.++..+-..+-...|.....|.|.+..+. .....-..+..++|+-+..++..|-.. ...+.+...+..+...+
T Consensus 251 ~LLG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~L 330 (454)
T KOG4332|consen 251 ALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLL 330 (454)
T ss_pred HHHHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHH
Confidence 33333333444555555557777765332 122122223455566555555544332 23344444444433333
Q ss_pred HHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhh--hc
Q 045196 114 CTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVVVG--RM 191 (255)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~--~~ 191 (255)
......+. +...+....++.+++.-.+.+..+|.+.-+-++..|.+.|++.+-+...--++...++-+-.... ..
T Consensus 331 pilt~~vs---P~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~ 407 (454)
T KOG4332|consen 331 PILTSSVS---PSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPT 407 (454)
T ss_pred HHHHhccC---CCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCcc
Confidence 32222111 11123333455555666678888999999999999999998876555433232222221111011 11
Q ss_pred CCCchhHHHHHHHHHHHHHH
Q 045196 192 SPSLSFLVFGALSIFSGVLS 211 (255)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~ 211 (255)
+....|-++.+..+++.+..
T Consensus 408 ~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 408 TTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred ccchhhhhhHHHHHHHHHHH
Confidence 23345666666666665543
No 282
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=89.52 E-value=12 Score=31.80 Aligned_cols=85 Identities=6% Similarity=0.009 Sum_probs=46.6
Q ss_pred ccchHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCch-----hH--HHHHHHHHHHHHHHHHHHHHHhhcchh
Q 045196 25 DNKNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFN-----LY--FSVALNALMEIPAVVIGTVLLSFTNRR 97 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~g~l~dr~grr 97 (255)
..+++.++++|..+......++.....++.++...........+ .. ......++..++..++.+++.+|+|-+
T Consensus 254 ~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 254 MESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 35677788998755544444444444455543322111111111 11 112334455555666679999999998
Q ss_pred HHHHHHHHHHHH
Q 045196 98 LLLSRSAYVAGS 109 (255)
Q Consensus 98 ~~l~~~~~~~~~ 109 (255)
...++.-+++.+
T Consensus 334 ~~a~i~Pii~li 345 (472)
T TIGR00769 334 TAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHH
Confidence 877766655544
No 283
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=88.16 E-value=3.1 Score=29.09 Aligned_cols=37 Identities=5% Similarity=-0.020 Sum_probs=28.2
Q ss_pred HhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhh
Q 045196 144 ASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGAS 180 (255)
Q Consensus 144 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~ 180 (255)
..+..++.|.+++-...++..|+..|+-.+--+++-+
T Consensus 108 g~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 108 GLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 3445578888888889888889999988777766544
No 284
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=86.91 E-value=13 Score=32.21 Aligned_cols=23 Identities=22% Similarity=0.072 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcch
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNR 96 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~gr 96 (255)
++..+.+++++..++++...+|.
T Consensus 304 ~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 304 ILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCC
Confidence 33445556666677777666653
No 285
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=86.66 E-value=2 Score=34.62 Aligned_cols=123 Identities=18% Similarity=0.141 Sum_probs=68.8
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcH
Q 045196 85 VIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVR 164 (255)
Q Consensus 85 ~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 164 (255)
+..-.+.|-..-|++++.-.+...+....+.+. .+.+.+=++-+..+.. ...-...++++=+..+++.+
T Consensus 60 vpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g----------~sV~~mQvlE~FyG~~-tAaEIAYysYIYs~Vd~~~Y 128 (433)
T KOG3810|consen 60 VPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFG----------PSVKAMQVLEFFYGPA-TAAEIAYYSYIYSKVDPEMY 128 (433)
T ss_pred HHHHHHhhhhhcceeeeeeccchhHHHHHHHhc----------CCchheeeehhhcChH-HHHHHhhhheeeeecCHHHH
Confidence 444457788888888877666555555555554 4555443333333332 23335677788888888888
Q ss_pred HHHHHHHHHHHHH----hhhhhhhHHHhhhcCCCchhHHHHHHHHHHHHHHHHhccCC
Q 045196 165 NIAVSFLRQALML----GASVSPLLVVVGRMSPSLSFLVFGALSIFSGVLSLWLPETK 218 (255)
Q Consensus 165 ~~~~~~~~~~~~~----g~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 218 (255)
.++.|.+....-. |+.++.++.+....+....-.+..+...++.++.+++|..+
T Consensus 129 qrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 129 KRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 8888887665543 44455555543322222222233333334445556776544
No 286
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.76 E-value=3.4 Score=26.78 Aligned_cols=30 Identities=13% Similarity=-0.233 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHhhc-chhHHHHHHHHHHH
Q 045196 79 MEIPAVVIGTVLLSFT-NRRLLLSRSAYVAG 108 (255)
Q Consensus 79 ~~~~~~~~~g~l~dr~-grr~~l~~~~~~~~ 108 (255)
..++.....||+.||+ |-+++.++.+++.+
T Consensus 54 sGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 54 SGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 3444556778999986 67776655554443
No 287
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=79.50 E-value=16 Score=24.35 Aligned_cols=32 Identities=16% Similarity=0.022 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAY 105 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~ 105 (255)
....+..+++.+++|+++-|..++|-++.+..
T Consensus 41 ~~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~ 72 (116)
T PF12670_consen 41 WLVVIIYILSVFIGGFYAGRKAGSKGWLHGLL 72 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 33445556677777777665544333344433
No 288
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=78.87 E-value=11 Score=31.06 Aligned_cols=18 Identities=17% Similarity=0.185 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 045196 78 LMEIPAVVIGTVLLSFTN 95 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~g 95 (255)
+..++...+.|++..|.|
T Consensus 6 i~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 344455566666666653
No 289
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=77.46 E-value=45 Score=28.55 Aligned_cols=41 Identities=10% Similarity=-0.023 Sum_probs=27.8
Q ss_pred HHHHHHH-HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Q 045196 73 VALNALM-EIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASIL 113 (255)
Q Consensus 73 ~~~~~~~-~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~ 113 (255)
..+.++. .++..++++.+.+|.|-....++.-+++.+..++
T Consensus 327 ~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~l 368 (509)
T COG3202 327 QIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVL 368 (509)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 3445554 5566788899999999887777666655555433
No 290
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=76.69 E-value=27 Score=28.26 Aligned_cols=69 Identities=12% Similarity=-0.025 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 045196 79 MEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVEL 158 (255)
Q Consensus 79 ~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 158 (255)
.-+..+++.+.+++++|-|..+.++..........-. ...+..++-.....+++.+..+...-++++++
T Consensus 70 ~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl-----------~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~ 138 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANL-----------EPRYETLVPAGLVLGMAAGPIWASKGTYLTPM 138 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc-----------chhHHhhccHHHhhccccccccccCcceecHH
Confidence 3344566666899999999988776554432211110 01222344444455555555555555555554
No 291
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=73.81 E-value=43 Score=26.54 Aligned_cols=36 Identities=14% Similarity=0.101 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHhh-------cchhHHHHHHHHHHHHHHHHH
Q 045196 79 MEIPAVVIGTVLLSF-------TNRRLLLSRSAYVAGSASILC 114 (255)
Q Consensus 79 ~~~~~~~~~g~l~dr-------~grr~~l~~~~~~~~~~~~~~ 114 (255)
..+..++++..++.| ||.||.=+++.+..++..+..
T Consensus 62 ~al~lal~A~~~a~r~~~~~~TfGy~R~eiLaa~~nav~Li~~ 104 (296)
T COG1230 62 LALLLALIAIKLARRPATKRFTFGYKRLEILAAFLNALLLIVV 104 (296)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCccHhHHHHHHHHHHHHHHHHH
Confidence 334445556666655 566666555555555544443
No 292
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=72.08 E-value=16 Score=31.40 Aligned_cols=11 Identities=0% Similarity=-0.043 Sum_probs=6.7
Q ss_pred cchHHhhcChh
Q 045196 26 NKNESLWGTKW 36 (255)
Q Consensus 26 ~~~~~l~~~~~ 36 (255)
..-.|+||.|+
T Consensus 315 LVhGDVFR~P~ 325 (628)
T KOG1278|consen 315 LVHGDVFRPPR 325 (628)
T ss_pred EeecccccCCC
Confidence 33456777765
No 293
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=71.70 E-value=2.4 Score=33.66 Aligned_cols=71 Identities=8% Similarity=0.059 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhc
Q 045196 79 MEIPAVVIGTVLLSFT--NRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCV 156 (255)
Q Consensus 79 ~~~~~~~~~g~l~dr~--grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
-..+..+.+.++.||+ |.|-.+.+ ++.+...++.++. .+.+..+....+..+. ++..-+.+.-.+
T Consensus 74 PsL~iKl~~Pff~~rfpf~~Ri~~~v--~~sa~s~~lVafs----------~s~~~sL~GV~~aSis-sGlGEiTFL~ls 140 (409)
T KOG3880|consen 74 PSLAIKLTAPFFIHRFPFGFRIALVV--LLSALSFFLVAFS----------NSVPMSLLGVVFASIS-SGLGEITFLALS 140 (409)
T ss_pred HHHHHHHhchhhhhhcccchHHHHHH--HHHhcceEEEEec----------cchhHHHhhhhhhhhc-CCcceeehhhhh
Confidence 4455667788888885 55544332 3333333333333 3444444444444433 333345555455
Q ss_pred cccchh
Q 045196 157 ELFPTN 162 (255)
Q Consensus 157 e~~p~~ 162 (255)
..+|..
T Consensus 141 s~Y~~~ 146 (409)
T KOG3880|consen 141 SRYPSI 146 (409)
T ss_pred ccCCCc
Confidence 555543
No 294
>PRK10263 DNA translocase FtsK; Provisional
Probab=64.16 E-value=1.1e+02 Score=29.97 Aligned_cols=18 Identities=17% Similarity=0.252 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 045196 78 LMEIPAVVIGTVLLSFTN 95 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~g 95 (255)
.++.+|.+++..+..-+|
T Consensus 63 l~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 63 LGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccchHHHHHHHHHHHHHh
Confidence 444555555555555555
No 295
>PF06781 UPF0233: Uncharacterised protein family (UPF0233); InterPro: IPR009619 This is a group of proteins of unknown function.
Probab=64.15 E-value=33 Score=21.50 Aligned_cols=12 Identities=8% Similarity=0.030 Sum_probs=4.7
Q ss_pred ChhHHHHHHHHH
Q 045196 34 TKWAAKRLIMVM 45 (255)
Q Consensus 34 ~~~~~~~~~~~~ 45 (255)
+|.....+.+.+
T Consensus 29 sp~W~~p~m~~l 40 (87)
T PF06781_consen 29 SPRWYAPLMLGL 40 (87)
T ss_pred CCccHHHHHHHH
Confidence 444333333333
No 296
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=62.01 E-value=1.3e+02 Score=27.45 Aligned_cols=33 Identities=27% Similarity=0.182 Sum_probs=20.9
Q ss_pred HHHHHHHhh----cchhHHHHHHHHHHHHHHHHHHHh
Q 045196 85 VIGTVLLSF----TNRRLLLSRSAYVAGSASILCTLF 117 (255)
Q Consensus 85 ~~~g~l~dr----~grr~~l~~~~~~~~~~~~~~~~~ 117 (255)
.+++-++|. -||.+-++++..+.+++.+...+.
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll 77 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLL 77 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556664 356677777777777776666655
No 297
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=61.34 E-value=72 Score=27.19 Aligned_cols=26 Identities=15% Similarity=-0.042 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHH
Q 045196 75 LNALMEIPAVVIGTVLLSFTNRRLLL 100 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr~grr~~l 100 (255)
+.++...+.+...-++++|+|-|+.+
T Consensus 340 ins~~lgi~S~~~~~l~~~~g~r~~y 365 (498)
T KOG0637|consen 340 LNSIVLGIYSLLVEKLSRKFGTRKRY 365 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcceEE
Confidence 34455556678888999999944433
No 298
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=60.76 E-value=63 Score=23.59 Aligned_cols=42 Identities=10% Similarity=0.108 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 045196 73 VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILC 114 (255)
Q Consensus 73 ~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~ 114 (255)
.....+..+++.++.-.+..|.+||..+.+..++.++..+++
T Consensus 34 ~~~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~ 75 (186)
T PF09605_consen 34 LFMPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLM 75 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 344556778888889999999999999888777766665444
No 299
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=60.59 E-value=20 Score=29.55 Aligned_cols=38 Identities=11% Similarity=-0.039 Sum_probs=29.6
Q ss_pred hhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhH
Q 045196 148 FDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLL 185 (255)
Q Consensus 148 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~ 185 (255)
-....-...|..|.+.|..+.|.-+........+.-++
T Consensus 404 DlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~il 441 (503)
T KOG2601|consen 404 DLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDIL 441 (503)
T ss_pred cHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhE
Confidence 34556678899999999999999999887766654443
No 300
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=60.31 E-value=1.4e+02 Score=27.26 Aligned_cols=49 Identities=20% Similarity=0.193 Sum_probs=27.5
Q ss_pred HHHHHHHhh----cchhHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHH
Q 045196 85 VIGTVLLSF----TNRRLLLSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFM 142 (255)
Q Consensus 85 ~~~g~l~dr----~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (255)
.+++-++|. -||.+-++++.++.+++.+...+.. ..+|.+.....+..+
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~---------~~p~lf~~~l~~~tf 93 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLF---------GKPWLFAVGLTVSTF 93 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh---------cCcHHHHHHHHHHHH
Confidence 344556664 3566666777766666666655543 455555444444443
No 301
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=57.46 E-value=3.4 Score=32.82 Aligned_cols=20 Identities=15% Similarity=0.225 Sum_probs=0.0
Q ss_pred HHhhhhhhhhhhhccccchhc
Q 045196 143 AASTAFDVMYIYCVELFPTNV 163 (255)
Q Consensus 143 ~~~~~~~~~~~~~~e~~p~~~ 163 (255)
+.+...+..+.+.+. +|++.
T Consensus 10 ~~~~~q~s~~glas~-~p~~y 29 (309)
T PF01733_consen 10 ANAVLQSSLFGLASL-FPPKY 29 (309)
T ss_dssp ---------------------
T ss_pred hhHHHhccHHHHHhc-CCHHH
Confidence 445555556666664 55543
No 302
>COG2119 Predicted membrane protein [Function unknown]
Probab=53.84 E-value=84 Score=22.94 Aligned_cols=36 Identities=22% Similarity=0.215 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH
Q 045196 77 ALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASI 112 (255)
Q Consensus 77 ~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~ 112 (255)
.+++.++.+.+.++++|+..|.+-.++.++..+..+
T Consensus 144 ~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal 179 (190)
T COG2119 144 ILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 356778888999999999999887776665544443
No 303
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=48.67 E-value=43 Score=23.19 Aligned_cols=22 Identities=9% Similarity=0.084 Sum_probs=16.6
Q ss_pred hccccchhcHHHHHHHHHHHHH
Q 045196 155 CVELFPTNVRNIAVSFLRQALM 176 (255)
Q Consensus 155 ~~e~~p~~~r~~~~~~~~~~~~ 176 (255)
+.|++|+..|............
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHH
Confidence 4799999999887766665543
No 304
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=48.57 E-value=74 Score=20.74 Aligned_cols=18 Identities=17% Similarity=0.054 Sum_probs=10.8
Q ss_pred hhcchhHHHHHHHHHHHH
Q 045196 92 SFTNRRLLLSRSAYVAGS 109 (255)
Q Consensus 92 dr~grr~~l~~~~~~~~~ 109 (255)
+|..+|+.+.+.....++
T Consensus 84 er~~~~~~~a~~l~~~Gv 101 (113)
T PF13536_consen 84 ERLSPRRWLAILLILIGV 101 (113)
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 678888776554444433
No 305
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=48.01 E-value=36 Score=26.32 Aligned_cols=23 Identities=4% Similarity=-0.071 Sum_probs=10.5
Q ss_pred hcHHHHHHHHHHHHHHhhhhhhh
Q 045196 162 NVRNIAVSFLRQALMLGASVSPL 184 (255)
Q Consensus 162 ~~r~~~~~~~~~~~~~g~~~~p~ 184 (255)
-.|..+.|+.....+....+...
T Consensus 75 ii~~iGLglg~liW~s~n~l~Gw 97 (254)
T PF07857_consen 75 IIKTIGLGLGMLIWGSVNCLTGW 97 (254)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHH
Confidence 34555555554444443333333
No 306
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=46.75 E-value=1.6e+02 Score=26.56 Aligned_cols=51 Identities=12% Similarity=0.314 Sum_probs=33.6
Q ss_pred cccchhcHHHHHHHHHHHHHHhhhhhhhHHHhhhc-CCCchhHHHHHHHHHH
Q 045196 157 ELFPTNVRNIAVSFLRQALMLGASVSPLLVVVGRM-SPSLSFLVFGALSIFS 207 (255)
Q Consensus 157 e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~ 207 (255)
+-.|++.|+.+.++......+|.++.-.+...... ....-|..++.+.++.
T Consensus 592 ~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (654)
T TIGR00926 592 SQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFENFSVQAAEFFLFASLMLVV 643 (654)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHH
Confidence 34688889999999998888888887776654322 2233455555544443
No 307
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=46.35 E-value=97 Score=21.41 Aligned_cols=23 Identities=26% Similarity=0.345 Sum_probs=17.3
Q ss_pred hccccchhcHHHHHHHHHHHHHH
Q 045196 155 CVELFPTNVRNIAVSFLRQALML 177 (255)
Q Consensus 155 ~~e~~p~~~r~~~~~~~~~~~~~ 177 (255)
+.|++|+..|....+........
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHH
Confidence 47999999999877776655443
No 308
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=45.79 E-value=86 Score=20.69 Aligned_cols=13 Identities=23% Similarity=0.023 Sum_probs=5.8
Q ss_pred hhcchhHHHHHHH
Q 045196 92 SFTNRRLLLSRSA 104 (255)
Q Consensus 92 dr~grr~~l~~~~ 104 (255)
.|++|-+.+....
T Consensus 6 ~KiN~~R~~al~l 18 (114)
T PF11023_consen 6 SKINKIRTFALSL 18 (114)
T ss_pred hHHHHHHHHHHHH
Confidence 3455544444333
No 309
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=44.57 E-value=88 Score=22.86 Aligned_cols=19 Identities=16% Similarity=0.011 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHhhcch
Q 045196 78 LMEIPAVVIGTVLLSFTNR 96 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~gr 96 (255)
++.+++.++.|++.||..+
T Consensus 93 ~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 93 IGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHHHhhhc
Confidence 4567788999999999875
No 310
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=42.85 E-value=1.7e+02 Score=23.20 Aligned_cols=24 Identities=17% Similarity=0.015 Sum_probs=16.0
Q ss_pred HHHhhcchhHHHHHHHHHHHHHHH
Q 045196 89 VLLSFTNRRLLLSRSAYVAGSASI 112 (255)
Q Consensus 89 ~l~dr~grr~~l~~~~~~~~~~~~ 112 (255)
++-||+.|-..+.++...+++...
T Consensus 119 flkErls~~Q~iAV~lA~~GV~~~ 142 (293)
T COG2962 119 FLKERLSRLQWIAVGLAAAGVLIQ 142 (293)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHH
Confidence 456888888777776665555443
No 311
>COG4708 Predicted membrane protein [Function unknown]
Probab=42.31 E-value=45 Score=23.07 Aligned_cols=26 Identities=19% Similarity=0.335 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhH
Q 045196 73 VALNALMEIPAVVIGTVLLSFTNRRL 98 (255)
Q Consensus 73 ~~~~~~~~~~~~~~~g~l~dr~grr~ 98 (255)
....+++.++...+++.+.|+.|+|.
T Consensus 140 w~tta~gEfvsl~vg~~~m~kl~kr~ 165 (169)
T COG4708 140 WFTTALGEFVSLYVGALIMDKLGKRI 165 (169)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhhh
Confidence 34456788888888899999988874
No 312
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=42.18 E-value=1.2e+02 Score=24.74 Aligned_cols=59 Identities=14% Similarity=0.130 Sum_probs=39.2
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHH
Q 045196 128 GGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLV 186 (255)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~ 186 (255)
++.|...++.+.=+...|..+...+--+.+-.+++.|-.+++.....-.+|-.++.++.
T Consensus 340 psi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 340 PSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred cHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 45565555555556666666676666666667778899888887766666665555443
No 313
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=41.73 E-value=96 Score=20.08 Aligned_cols=28 Identities=14% Similarity=0.191 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHH
Q 045196 81 IPAVVIGTVLLSFTNRRLLLSRSAYVAG 108 (255)
Q Consensus 81 ~~~~~~~g~l~dr~grr~~l~~~~~~~~ 108 (255)
++|.+++-||=.+++-++.+.+.+++.+
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 3444555555556776554444443333
No 314
>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate.
Probab=41.61 E-value=60 Score=24.94 Aligned_cols=19 Identities=5% Similarity=-0.393 Sum_probs=10.3
Q ss_pred hcchhHHHHHHHHHHHHHH
Q 045196 93 FTNRRLLLSRSAYVAGSAS 111 (255)
Q Consensus 93 r~grr~~l~~~~~~~~~~~ 111 (255)
++.||+.++...+...+..
T Consensus 192 ~faRkR~i~f~llgllfli 210 (256)
T PF09788_consen 192 RFARKRAIIFFLLGLLFLI 210 (256)
T ss_pred hHhhhHHHHHHHHHHHHHH
Confidence 5677776655444433333
No 315
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=41.45 E-value=2.3e+02 Score=24.27 Aligned_cols=24 Identities=17% Similarity=0.080 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcc-hhH
Q 045196 75 LNALMEIPAVVIGTVLLSFTN-RRL 98 (255)
Q Consensus 75 ~~~~~~~~~~~~~g~l~dr~g-rr~ 98 (255)
+.++...+....+|-+--|.| ||+
T Consensus 335 vYAlTs~i~GY~~gs~Y~r~gG~~W 359 (593)
T KOG1277|consen 335 VYALTSPINGYVSGSFYARLGGRRW 359 (593)
T ss_pred HHHhcccccccccceeeehhccHHH
Confidence 333444444444444555664 543
No 316
>PRK02935 hypothetical protein; Provisional
Probab=41.45 E-value=99 Score=20.13 Aligned_cols=15 Identities=13% Similarity=-0.080 Sum_probs=7.1
Q ss_pred HhhcchhHHHHHHHH
Q 045196 91 LSFTNRRLLLSRSAY 105 (255)
Q Consensus 91 ~dr~grr~~l~~~~~ 105 (255)
+.|++|-+.+.....
T Consensus 6 ssKINkiRt~aL~lv 20 (110)
T PRK02935 6 SNKINKIRTFALSLV 20 (110)
T ss_pred hhHHHHHHHHHHHHH
Confidence 345555555444333
No 317
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=40.69 E-value=97 Score=23.49 Aligned_cols=44 Identities=2% Similarity=0.064 Sum_probs=25.4
Q ss_pred ecccCchhHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 045196 62 VGNLNFNLYFSVALNALMEIPAVVIGTVLLSFTNRRLLLSRSAY 105 (255)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~ 105 (255)
.+..+.+........++...+..+....+.+|.+.++....+..
T Consensus 123 a~~~~~s~~~ig~~~g~if~i~il~ss~i~r~~~~~~p~~LG~~ 166 (224)
T PF09930_consen 123 APSIGLSGWEIGLVLGLIFFILILLSSFIFRRLKKPYPIILGNF 166 (224)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHH
Confidence 34445555555555555555555777777777774444444443
No 318
>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=40.43 E-value=2e+02 Score=23.37 Aligned_cols=89 Identities=10% Similarity=0.020 Sum_probs=41.0
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHHHHHhhheeeeecccCchhHHHHHHHHHHHHHHHHHHHHHHhh-------cchhHH
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNLNFNLYFSVALNALMEIPAVVIGTVLLSF-------TNRRLL 99 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-------~grr~~ 99 (255)
.++..+.++.-|+ .+...+......+.-.....+.+.++.-....-.+.........+.+.+++.+ +|+-+.
T Consensus 24 ~~r~il~~~~sr~-if~f~llnl~~~fv~l~y~~~snSlgLiSda~hm~FDctal~~gL~a~~is~~~~~~~fsyG~~r~ 102 (354)
T KOG1484|consen 24 WFRQILSDKDSRS-IFLFLLLNLAFMFVELFYGSWSNSLGLISDAFHMFFDCTALLAGLYASVISKWPANDKFSYGYGRI 102 (354)
T ss_pred HHHhhccCcchhh-hHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHhhhhHHHHhcCCCccccCcchhHH
Confidence 3445555665333 33333333333222222223445555433222233334445555666666543 466666
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045196 100 LSRSAYVAGSASILCTL 116 (255)
Q Consensus 100 l~~~~~~~~~~~~~~~~ 116 (255)
-+.+.+..++...+.++
T Consensus 103 evLagF~n~vflvl~a~ 119 (354)
T KOG1484|consen 103 EVLAGFVNGVFLVLIAF 119 (354)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55555555555554443
No 319
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=39.91 E-value=2.3e+02 Score=23.99 Aligned_cols=25 Identities=8% Similarity=0.139 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHH
Q 045196 76 NALMEIPAVVIGTVLLSFTNRRLLL 100 (255)
Q Consensus 76 ~~~~~~~~~~~~g~l~dr~grr~~l 100 (255)
.++..+.-+++.-++.+.+.++++-
T Consensus 300 YgiLFI~LTF~~fflfE~~~~~~iH 324 (430)
T PF06123_consen 300 YGILFIGLTFLAFFLFELLSKLRIH 324 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccc
Confidence 3344455566667777877776653
No 320
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=39.50 E-value=1.3e+02 Score=24.91 Aligned_cols=23 Identities=13% Similarity=0.004 Sum_probs=13.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhh
Q 045196 35 KWAAKRLIMVMTAGFGVGFVYYG 57 (255)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~ 57 (255)
++..+..+..|..||..+..+..
T Consensus 156 ~~~ak~sl~fc~lWF~anl~~na 178 (416)
T KOG2765|consen 156 TQTAKLSLFFCPLWFLANLTSNA 178 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777777776655443
No 321
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=38.92 E-value=2.2e+02 Score=23.40 Aligned_cols=63 Identities=13% Similarity=0.003 Sum_probs=32.1
Q ss_pred chHHhhcChhHHHHHHHHHHHHHHH-HHHhhheeeeecccCc-----hhHHHHHHHHHHHHHHHHHHHHHHhh
Q 045196 27 KNESLWGTKWAAKRLIMVMTAGFGV-GFVYYGIQLNVGNLNF-----NLYFSVALNALMEIPAVVIGTVLLSF 93 (255)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~l~dr 93 (255)
.++.++++|+ ++.....+.+. ...|-....|.|.+.. ..........+..++|+.+..++..+
T Consensus 236 a~~~i~~d~r----il~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 236 AWRAILSDPR----ILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHHcCch----hHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3445555543 44444444444 4444444567776542 22333333345667788777655443
No 322
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=36.79 E-value=46 Score=25.23 Aligned_cols=44 Identities=7% Similarity=0.094 Sum_probs=24.2
Q ss_pred HHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhh
Q 045196 140 GFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPL 184 (255)
Q Consensus 140 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~ 184 (255)
.+.+.+........-+.+.+|. ...+..++....+-+.++.+-+
T Consensus 181 sGvGSgSMMaAa~~aL~~~~P~-~a~~i~A~AaaSNllt~~~G~Y 224 (241)
T PF11299_consen 181 SGVGSGSMMAAASGALAAAYPE-MADQILAFAAASNLLTSVTGLY 224 (241)
T ss_pred cCCcHHHHHHHHHHHHHHHCcc-hHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555666677764 4555566665555555554444
No 323
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=34.99 E-value=13 Score=28.93 Aligned_cols=17 Identities=12% Similarity=0.311 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhccCC
Q 045196 202 ALSIFSGVLSLWLPETK 218 (255)
Q Consensus 202 ~~~~~~~~~~~~~~e~~ 218 (255)
.+.++++++++++-+++
T Consensus 173 L~LFlaiLIWlY~H~~~ 189 (381)
T PF05297_consen 173 LLLFLAILIWLYVHDQR 189 (381)
T ss_dssp -----------------
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 33445555555554443
No 324
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=34.81 E-value=1.8e+02 Score=21.07 Aligned_cols=16 Identities=6% Similarity=0.123 Sum_probs=8.8
Q ss_pred ccchHHhhcChhHHHH
Q 045196 25 DNKNESLWGTKWAAKR 40 (255)
Q Consensus 25 ~~~~~~l~~~~~~~~~ 40 (255)
..+|.+.|+-++.+++
T Consensus 24 ~L~W~~ffkLRk~rrr 39 (173)
T PF08566_consen 24 QLTWNEFFKLRKSRRR 39 (173)
T ss_pred CCCHHHHHHHHHHhhH
Confidence 4567776655443433
No 325
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=34.48 E-value=1.7e+02 Score=21.01 Aligned_cols=19 Identities=21% Similarity=0.190 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHhhcchhH
Q 045196 80 EIPAVVIGTVLLSFTNRRL 98 (255)
Q Consensus 80 ~~~~~~~~g~l~dr~grr~ 98 (255)
..+.-++.|++.-|++.++
T Consensus 126 ~~~~L~ilG~~~a~~s~~~ 144 (169)
T TIGR00267 126 TLIALLVLGVYLGRISREN 144 (169)
T ss_pred HHHHHHHHHHHHHHHcCCc
Confidence 3334445555555554443
No 326
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=34.40 E-value=2e+02 Score=21.49 Aligned_cols=28 Identities=25% Similarity=0.179 Sum_probs=13.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 045196 66 NFNLYFSVALNALMEIPAVVIGTVLLSF 93 (255)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr 93 (255)
+.+........++..++....+-++.+|
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~ 180 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKK 180 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555455555555444444444444
No 327
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=34.32 E-value=1.4e+02 Score=19.63 Aligned_cols=42 Identities=12% Similarity=-0.157 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 045196 73 VALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILC 114 (255)
Q Consensus 73 ~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~ 114 (255)
....+-..++.+++.++.+|+...-+.=.++..++.+...++
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 334455667788899999998776655556665555544443
No 328
>PF00672 HAMP: HAMP domain; InterPro: IPR003660 The HAMP linker domain (present in Histidine kinases, Adenyl cyclases, Methyl-accepting proteins and Phosphatases) is an approximately 50-amino acid alpha-helical region. It is found in bacterial sensor and chemotaxis proteins and in eukaryotic histidine kinases. The bacterial proteins are usually integral membrane proteins and part of a two-component signal transduction pathway. One or several copies of the HAMP domain can be found in association with other domains, such as the histidine kinase domain, the bacterial chemotaxis sensory transducer domain, the PAS repeat, the EAL domain, the GGDEF domain, the protein phosphatase 2C-like domain, the guanylate cyclase domain, or the response regulatory domain. It has been suggested that the HAMP domain possesses a role of regulating the phosphorylation or methylation of homodimeric receptors by transmitting the conformational changes in periplasmic ligand-binding domains to cytoplasmic signalling kinase and methyl-acceptor domains.; GO: 0004871 signal transducer activity, 0007165 signal transduction, 0016021 integral to membrane; PDB: 3PJX_A 3PJW_A 3ZX6_B 2Y20_B 2Y0Q_D 2Y21_H 3ZRW_C 2L7H_B 2LFS_B 2L7I_B ....
Probab=34.19 E-value=45 Score=19.22 Aligned_cols=25 Identities=20% Similarity=0.207 Sum_probs=10.5
Q ss_pred HHHHHHHHHHhccCCCCCchHhHHh
Q 045196 204 SIFSGVLSLWLPETKNAPLYETLKQ 228 (255)
Q Consensus 204 ~~~~~~~~~~~~e~~~~~~~~~~~~ 228 (255)
.+++.++.+++...-.+++.+..+.
T Consensus 9 ~~~~~~~~~~~~~~i~~pl~~l~~~ 33 (70)
T PF00672_consen 9 LLLSLLLAWLLARRITRPLRRLSDA 33 (70)
T ss_dssp HHHHHHHHHH--HTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444445544445555554433
No 329
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=33.56 E-value=60 Score=20.76 Aligned_cols=22 Identities=9% Similarity=0.036 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHhhcchh
Q 045196 76 NALMEIPAVVIGTVLLSFTNRR 97 (255)
Q Consensus 76 ~~~~~~~~~~~~g~l~dr~grr 97 (255)
.-+..++.+++.|.+.||..||
T Consensus 84 ~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 84 TFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHhhC
Confidence 3345566788999999998886
No 330
>PRK02237 hypothetical protein; Provisional
Probab=33.37 E-value=1.4e+02 Score=19.60 Aligned_cols=41 Identities=5% Similarity=-0.179 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 045196 74 ALNALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILC 114 (255)
Q Consensus 74 ~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~ 114 (255)
...+-..++.+++.++.+|+...-+.=.++..++.+...++
T Consensus 63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 34455667778888888887765555455555554444333
No 331
>KOG3500 consensus Vacuolar H+-ATPase V0 sector, subunit M9.7 (M9.2) [Energy production and conversion]
Probab=33.35 E-value=1.2e+02 Score=18.69 Aligned_cols=39 Identities=10% Similarity=-0.010 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 045196 77 ALMEIPAVVIGTVLLSFTNRRLLLSRSAYVAGSASILCT 115 (255)
Q Consensus 77 ~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~~~~~~~ 115 (255)
++...+.++.+.++..|.-.|.++-...+++++++.++.
T Consensus 11 tvfw~~v~~~~pi~~~kgP~~~li~~~lvlTAVCCwlfW 49 (84)
T KOG3500|consen 11 TVFWGIVGICGPICFPKGPNRGLIRCMLVLTAVCCWLFW 49 (84)
T ss_pred HHHHHHHHHhcceeccCCCCcChhHHHHHHHHHHHHHHH
Confidence 344444556666677777777776666666666655443
No 332
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=33.09 E-value=1.9e+02 Score=20.99 Aligned_cols=31 Identities=6% Similarity=0.121 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Q 045196 79 MEIPAVVIGTVLLSFTNRRLLLSRSAYVAGS 109 (255)
Q Consensus 79 ~~~~~~~~~g~l~dr~grr~~l~~~~~~~~~ 109 (255)
..++++.++.+..+|..+|.-++.+.+..++
T Consensus 109 ~~l~~~~~~~~~~~~~~~R~~~i~ag~~v~l 139 (194)
T PF07698_consen 109 YSLVSGIVAIFSVRRIRSRSDIIKAGLLVGL 139 (194)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667777777777777655544443333
No 333
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=32.78 E-value=1.2e+02 Score=19.44 Aligned_cols=17 Identities=24% Similarity=0.276 Sum_probs=9.2
Q ss_pred CCchhHHHHHHHHHHHH
Q 045196 193 PSLSFLVFGALSIFSGV 209 (255)
Q Consensus 193 ~~~~~~~~~~~~~~~~~ 209 (255)
|-.+|.+++++.+.+..
T Consensus 52 WIFAFvI~avlfv~sl~ 68 (97)
T PF08611_consen 52 WIFAFVIAAVLFVLSLV 68 (97)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44456666665555443
No 334
>PRK11715 inner membrane protein; Provisional
Probab=32.33 E-value=3.2e+02 Score=23.29 Aligned_cols=25 Identities=12% Similarity=0.141 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHH
Q 045196 76 NALMEIPAVVIGTVLLSFTNRRLLL 100 (255)
Q Consensus 76 ~~~~~~~~~~~~g~l~dr~grr~~l 100 (255)
.++..+.-++.+-++.+...++++-
T Consensus 306 YgiLFI~LTF~~fFlfE~~~~~~iH 330 (436)
T PRK11715 306 YAILFIALTFAAFFLFELLKKLRIH 330 (436)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceec
Confidence 3444455566667777877766543
No 335
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=31.81 E-value=2.2e+02 Score=21.35 Aligned_cols=22 Identities=9% Similarity=0.070 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHhhcchhH
Q 045196 77 ALMEIPAVVIGTVLLSFTNRRL 98 (255)
Q Consensus 77 ~~~~~~~~~~~g~l~dr~grr~ 98 (255)
..+.++|..++.++.+|+.+|.
T Consensus 203 ~~~~~~G~~lG~~~~~~i~~~~ 224 (240)
T PF01925_consen 203 LPGAFLGAFLGAKLARKIPQKV 224 (240)
T ss_pred HHHHHHHHHHHHHHHHhCCHHH
Confidence 3445556666666666665443
No 336
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=30.92 E-value=2.8e+02 Score=22.24 Aligned_cols=90 Identities=11% Similarity=0.108 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhhcchhHH-----HHHHHHHHHHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhh
Q 045196 81 IPAVVIGTVLLSFTNRRLL-----LSRSAYVAGSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYC 155 (255)
Q Consensus 81 ~~~~~~~g~l~dr~grr~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (255)
++-.-+++.+++|-|.-.+ ++++.+...+. .+. ..++|.-+....+ .+...+...++.
T Consensus 21 LllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~----~~~---------t~spw~gl~~a~l----~g~l~~ll~a~~ 83 (304)
T COG1079 21 LLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALF----AYG---------TGSPWLGLLAAAL----VGALFGLLHAFL 83 (304)
T ss_pred HHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHH----HHc---------cccHHHHHHHHHH----HHHHHHHHHHHH
Confidence 3455678899999876543 44433332222 221 1455544433333 334446667777
Q ss_pred ccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 156 VELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 156 ~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
+.....++--++.++......+..+++..+.+
T Consensus 84 ti~l~~nqiisG~alnl~a~Glt~fl~~~~~~ 115 (304)
T COG1079 84 TIKLRANQIISGLALNLLASGLTAFLGQSIFG 115 (304)
T ss_pred HHhhccccchhHHHHHHHHHHHHHHHHHHHhc
Confidence 77777777777777777666666665555444
No 337
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=30.51 E-value=3e+02 Score=22.44 Aligned_cols=205 Identities=13% Similarity=-0.054 Sum_probs=0.0
Q ss_pred hhcChhHHHHHHHHHHHHHHHHHHhhheeeeeccc-CchhHHHHHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHH
Q 045196 31 LWGTKWAAKRLIMVMTAGFGVGFVYYGIQLNVGNL-NFNLYFSVALNALMEIPAVVIGTVLLSFT--NRRLLLSRSAYVA 107 (255)
Q Consensus 31 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~~l~~~~~~~ 107 (255)
.+|.|..+...+...++..+..+..+.-..--.+- +.+....+-+..+.+.+-.-+.-.+-+++ .+.+....+....
T Consensus 126 fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Gl 205 (334)
T PF06027_consen 126 FLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGL 205 (334)
T ss_pred HHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHH
Q ss_pred HHHHHHHHHhcccCCCCCCCCCchHHHHHHHHHHHHHhhhhhhhhhhhccccchhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 108 GSASILCTLFSNNNNNKGKGGGSWPQLIIEGVGFMAASTAFDVMYIYCVELFPTNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
.-..+........+.+.-..-....-....+++........-....+.-....+-.-..+.-.....+-+.+++.
T Consensus 206 fg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~----- 280 (334)
T PF06027_consen 206 FGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFF----- 280 (334)
T ss_pred HHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHh-----
Q ss_pred hhhcCCCchhHHHHHHHHHHHHHHHHhccCCCCCchHhHHhhhhhHHhhhHHHh
Q 045196 188 VGRMSPSLSFLVFGALSIFSGVLSLWLPETKNAPLYETLKQQGEEEEKQKCFEA 241 (255)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (255)
.+....+.+++..++.+++.++...-++...++.++..++..++.+++.....
T Consensus 281 -f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (334)
T PF06027_consen 281 -FGYKFSWLYILAFALIIIGFVVYNLAESPEEEARRNERKQELEEGQDEDGPDT 333 (334)
T ss_pred -cCccccHHHHHHHHHHHHHhheEEccCCcccccchhhcccccccccccccccc
No 338
>PF03605 DcuA_DcuB: Anaerobic c4-dicarboxylate membrane transporter; InterPro: IPR004668 These proteins are members of the C4-Dicarboxylate Uptake (Dcu) family. Most proteins in this family are predicted to have 12 GES predicted transmembrane regions; however the one member whose membrane topology has been experimentally determined has 10 transmembrane regions, with both the N- and C-termini localized to the periplasm []. The DcuA and DcuB proteins are involved in the transport of aspartate, malate, fumarate and succinate in many species [, , ], and are thought to function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively []. The Escherichia coli DcuA and DcuB proteins have very different expression patterns []. DcuA is constitutively expressed; DcuB is strongly induced anaerobically by FNR and C4-dicarboxylates, while it is repressed by nitrate and subject to CRP-mediated catabolite repression.; GO: 0015556 C4-dicarboxylate transmembrane transporter activity, 0015740 C4-dicarboxylate transport, 0016021 integral to membrane
Probab=30.10 E-value=3.2e+02 Score=22.58 Aligned_cols=11 Identities=27% Similarity=0.422 Sum_probs=6.8
Q ss_pred CCCCCCccccc
Q 045196 2 GKKLPTNLTLA 12 (255)
Q Consensus 2 ~~~~~~~~~~~ 12 (255)
|+++++|.++.
T Consensus 188 GkeL~~Dp~yq 198 (364)
T PF03605_consen 188 GKELDDDPEYQ 198 (364)
T ss_pred CCccccCHHHH
Confidence 56777765543
No 339
>PF04120 Iron_permease: Low affinity iron permease ; InterPro: IPR007251 Although originally identified as a low-affinity iron(II) permease [, ], Fet4 has since been shown to import several other transition metal ions, including copper [, ] and zinc []. Copper, cobalt, and cadmium inhibit Fet4 [, ]. Fet4 is an integral protein of the plasma membrane [, ]. FET4 is not essential, not even in fet3 fet4 double mutants []. Over expression of FET4 improves growth under alkaline conditions []. Transcription of FET4 is induced by Aft1 in response to low levels of iron [, , ] or by Zap1 in response to low zinc [, ], but not in response to low copper []. When the high-affinity iron permease component Fet3 is deleted, FET4 is induced by the addition of copper, zinc, cobalt, or manganese []. It is also induced under anaerobic conditions [, , ] and repressed by Rox1 in aerobic conditions [, ]. Rox1 attenuates the activation of FET4 by Aft1 or Zap1 []. ; GO: 0055085 transmembrane transport
Probab=29.91 E-value=1.9e+02 Score=19.89 Aligned_cols=26 Identities=15% Similarity=0.280 Sum_probs=13.7
Q ss_pred chhHHHHHHHHHHHHHHHHhccCCCC
Q 045196 195 LSFLVFGALSIFSGVLSLWLPETKNA 220 (255)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~e~~~~ 220 (255)
|-.++-....++.++.++++..+..+
T Consensus 41 WQLviNt~ttIitFlmvfLIQn~q~R 66 (132)
T PF04120_consen 41 WQLVINTATTIITFLMVFLIQNTQNR 66 (132)
T ss_pred HHHHHccHHHHHHHHHHHHHHhhhhh
Confidence 33445555555655555666554443
No 340
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=28.75 E-value=1.1e+02 Score=16.66 Aligned_cols=17 Identities=18% Similarity=0.245 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHhhcch
Q 045196 80 EIPAVVIGTVLLSFTNR 96 (255)
Q Consensus 80 ~~~~~~~~g~l~dr~gr 96 (255)
.++|+++++++.+.+|-
T Consensus 4 GiiGa~vGg~l~~~lg~ 20 (48)
T PF04226_consen 4 GIIGAFVGGWLFGLLGI 20 (48)
T ss_pred ehHHHHHHHHHHHHhcc
Confidence 45677777777766665
No 341
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=28.69 E-value=2.1e+02 Score=20.05 Aligned_cols=20 Identities=25% Similarity=0.002 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHhhcchh
Q 045196 78 LMEIPAVVIGTVLLSFTNRR 97 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~grr 97 (255)
++..+...+.|++.+|..++
T Consensus 64 ~gf~~~a~i~g~~~~~~~~~ 83 (148)
T PF02632_consen 64 LGFPLAALIIGLLAERLKRS 83 (148)
T ss_pred HHHHHHHHHHHHHHHhcccc
Confidence 45667788899999998775
No 342
>PF06898 YqfD: Putative stage IV sporulation protein YqfD; InterPro: IPR010690 This family consists of several putative bacterial stage IV sporulation (SpoIV) proteins. YqfD of Bacillus subtilis (P54469 from SWISSPROT) is known to be essential for efficient sporulation although its exact function is unknown [].
Probab=28.61 E-value=69 Score=26.56 Aligned_cols=31 Identities=10% Similarity=-0.127 Sum_probs=22.4
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Q 045196 86 IGTVLLSFTNRRLLLSRSAYVAGSASILCTL 116 (255)
Q Consensus 86 ~~g~l~dr~grr~~l~~~~~~~~~~~~~~~~ 116 (255)
-.+++..|+.||+.+++|++++++.++++..
T Consensus 76 GlpF~~~r~~~R~~~~~G~~~f~~~l~~lS~ 106 (385)
T PF06898_consen 76 GLPFFLKRLRRRKGFVAGIVLFLALLYILSS 106 (385)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3456677889999999888877666655543
No 343
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=28.22 E-value=1.6e+02 Score=20.81 Aligned_cols=25 Identities=8% Similarity=0.182 Sum_probs=12.1
Q ss_pred hHHhhcChhHHHHHHHHHHHHHHHHH
Q 045196 28 NESLWGTKWAAKRLIMVMTAGFGVGF 53 (255)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~~~~~~ 53 (255)
+-+...++. .+++.+.+.+=.+.++
T Consensus 53 IP~~Vs~RM-~rRm~~~~GiP~~lG~ 77 (153)
T PF11947_consen 53 IPEVVSNRM-LRRMAVFVGIPTALGV 77 (153)
T ss_pred cCHHHHHHH-HHHHHHHhchHHHHHH
Confidence 445555554 4555555544444333
No 344
>TIGR02876 spore_yqfD sporulation protein YqfD. YqfD is part of the sigma-E regulon in the sporulation program of endospore-forming Gram-positive bacteria. Mutation results in a sporulation defect in Bacillus subtilis. Members are found in all currently known endospore-forming bacteria, including the genera Bacillus, Symbiobacterium, Carboxydothermus, Clostridium, and Thermoanaerobacter.
Probab=27.68 E-value=70 Score=26.51 Aligned_cols=31 Identities=10% Similarity=-0.041 Sum_probs=22.4
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHHHh
Q 045196 87 GTVLLSFTNRRLLLSRSAYVAGSASILCTLF 117 (255)
Q Consensus 87 ~g~l~dr~grr~~l~~~~~~~~~~~~~~~~~ 117 (255)
.+++..|+-||+.+++|.+++.+.++++...
T Consensus 74 lpF~~~r~~kRk~~~~G~~~f~~ll~~lS~f 104 (382)
T TIGR02876 74 LPFLFKRLRKRPGILIGILLFLAIVYFLSNF 104 (382)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhe
Confidence 4556778889999999888777666555443
No 345
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=26.81 E-value=1.5e+02 Score=17.88 Aligned_cols=27 Identities=11% Similarity=-0.034 Sum_probs=19.1
Q ss_pred HhhcchhHHHHHHHHHHHHHHHHHHHh
Q 045196 91 LSFTNRRLLLSRSAYVAGSASILCTLF 117 (255)
Q Consensus 91 ~dr~grr~~l~~~~~~~~~~~~~~~~~ 117 (255)
-|+-.|++-+.+.+.+...++++..+.
T Consensus 11 ~d~~~R~r~Y~i~M~~Ri~~fvlA~~~ 37 (73)
T PF11298_consen 11 QDQRRRRRRYLIMMGIRIPCFVLAAVV 37 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667788888777777777666665
No 346
>PRK10711 hypothetical protein; Provisional
Probab=26.38 E-value=2.7e+02 Score=21.27 Aligned_cols=18 Identities=6% Similarity=-0.149 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHhhcchh
Q 045196 80 EIPAVVIGTVLLSFTNRR 97 (255)
Q Consensus 80 ~~~~~~~~g~l~dr~grr 97 (255)
.-+..+++--+++++|--
T Consensus 126 kSVTtPIAm~is~~iGG~ 143 (231)
T PRK10711 126 KSVTTPIAMAVGGSIGGI 143 (231)
T ss_pred hhhhHHHHHHHHHHhCCc
Confidence 344555555666666543
No 347
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.83 E-value=1.2e+02 Score=24.75 Aligned_cols=9 Identities=33% Similarity=0.659 Sum_probs=5.0
Q ss_pred ccchhcHHH
Q 045196 158 LFPTNVRNI 166 (255)
Q Consensus 158 ~~p~~~r~~ 166 (255)
++|...|-.
T Consensus 209 LWP~~mR~g 217 (372)
T KOG2927|consen 209 LWPRRMRQG 217 (372)
T ss_pred cCcHHHhcc
Confidence 466666543
No 348
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.79 E-value=2e+02 Score=18.94 Aligned_cols=27 Identities=7% Similarity=0.081 Sum_probs=16.4
Q ss_pred hhcHHHHHHHHHHHHHHhhhhhhhHHH
Q 045196 161 TNVRNIAVSFLRQALMLGASVSPLLVV 187 (255)
Q Consensus 161 ~~~r~~~~~~~~~~~~~g~~~~p~~~~ 187 (255)
++.++.+.++--..-.+++++.....|
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG 63 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIG 63 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 455677777766666666665444444
No 349
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=25.50 E-value=4e+02 Score=22.19 Aligned_cols=17 Identities=12% Similarity=0.448 Sum_probs=10.9
Q ss_pred hhhhhhhhhhhccccch
Q 045196 145 STAFDVMYIYCVELFPT 161 (255)
Q Consensus 145 ~~~~~~~~~~~~e~~p~ 161 (255)
....+..|.++.|.+=.
T Consensus 249 F~vl~ii~~i~~E~~L~ 265 (374)
T PF01528_consen 249 FAVLSIIYLIVIEVVLA 265 (374)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34446777788887543
No 350
>PRK10255 PTS system N-acetyl glucosamine specific transporter subunits IIABC; Provisional
Probab=24.96 E-value=3.8e+02 Score=24.23 Aligned_cols=40 Identities=10% Similarity=0.119 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHhhc-------------chhHHHHHHHHHHHHHHHHHHHh
Q 045196 78 LMEIPAVVIGTVLLSFT-------------NRRLLLSRSAYVAGSASILCTLF 117 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~-------------grr~~l~~~~~~~~~~~~~~~~~ 117 (255)
+++++..++.+++-+|+ |+|.+.+++.+.+.+..+++.+.
T Consensus 99 fgGIi~G~i~a~l~nkf~~~klP~~l~fF~G~rfVpii~~~~~~~~g~i~~~i 151 (648)
T PRK10255 99 LAGIITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYV 151 (648)
T ss_pred hhhhHHHHHHHHHHHHhccccCCceeeecCCcchhHhHHHHHHHHHHHHHHHh
Confidence 35566667778888875 67888777777666665555544
No 351
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=24.87 E-value=68 Score=21.63 Aligned_cols=9 Identities=11% Similarity=0.213 Sum_probs=3.3
Q ss_pred HHHhccCCC
Q 045196 211 SLWLPETKN 219 (255)
Q Consensus 211 ~~~~~e~~~ 219 (255)
.+++.+.++
T Consensus 85 ~y~irR~~K 93 (122)
T PF01102_consen 85 SYCIRRLRK 93 (122)
T ss_dssp HHHHHHHS-
T ss_pred HHHHHHHhc
Confidence 344443333
No 352
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=24.73 E-value=4.2e+02 Score=22.17 Aligned_cols=29 Identities=3% Similarity=-0.075 Sum_probs=17.4
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 045196 129 GSWPQLIIEGVGFMAASTAFDVMYIYCVE 157 (255)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 157 (255)
+.+.+.+...+.+...+.-.|+.+.+...
T Consensus 104 ~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 104 SRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 34555555566666566666776666655
No 353
>PRK04288 antiholin-like protein LrgB; Provisional
Probab=24.58 E-value=3.3e+02 Score=20.89 Aligned_cols=20 Identities=5% Similarity=-0.150 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHhhcchhH
Q 045196 79 MEIPAVVIGTVLLSFTNRRL 98 (255)
Q Consensus 79 ~~~~~~~~~g~l~dr~grr~ 98 (255)
.--+..+++--++|++|--+
T Consensus 130 pKSVTtPIAm~is~~iGG~p 149 (232)
T PRK04288 130 PQAATTAIALPVSAGIGGIK 149 (232)
T ss_pred hHhhhHHHHHHHHHHhCCcH
Confidence 33445566666666665444
No 354
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=24.21 E-value=3e+02 Score=20.40 Aligned_cols=14 Identities=14% Similarity=0.295 Sum_probs=8.2
Q ss_pred CCccchHHhhcChh
Q 045196 23 NSDNKNESLWGTKW 36 (255)
Q Consensus 23 ~~~~~~~~l~~~~~ 36 (255)
++..+-++++-+|.
T Consensus 43 k~G~tA~~lfG~P~ 56 (206)
T PF06570_consen 43 KKGKTARQLFGDPK 56 (206)
T ss_pred hCCCcHHHHcCCHH
Confidence 34455666776654
No 355
>COG3766 Predicted membrane protein [Function unknown]
Probab=23.57 E-value=2.5e+02 Score=19.16 Aligned_cols=41 Identities=20% Similarity=0.340 Sum_probs=20.9
Q ss_pred HHHHhhhhhhhHHHhhhcCCCchhHHHHHHHHHHHHHHHHh
Q 045196 174 ALMLGASVSPLLVVVGRMSPSLSFLVFGALSIFSGVLSLWL 214 (255)
Q Consensus 174 ~~~~g~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
.+.+-+..-|+-....+...-..+..++...++.-++.++.
T Consensus 53 ~G~llG~~~plassi~~s~sl~~~~~Wg~~~~vvqLl~f~i 93 (133)
T COG3766 53 GGALLGYVIPLASSISHSVSLPDYLAWGAIALVVQLLVFFI 93 (133)
T ss_pred cchHHhhHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555444333445666666665554444433
No 356
>PF12911 OppC_N: N-terminal TM domain of oligopeptide transport permease C
Probab=23.38 E-value=1.2e+02 Score=16.62 Aligned_cols=24 Identities=13% Similarity=-0.058 Sum_probs=13.1
Q ss_pred HhhcchhHHHHHHHHHHHHHHHHH
Q 045196 91 LSFTNRRLLLSRSAYVAGSASILC 114 (255)
Q Consensus 91 ~dr~grr~~l~~~~~~~~~~~~~~ 114 (255)
-+|+-|.+.-+++.++..+..++.
T Consensus 9 ~~~f~~nk~a~~gl~il~~~vl~a 32 (56)
T PF12911_consen 9 WRRFRRNKLAVIGLIILLILVLLA 32 (56)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHH
Confidence 345666666666665554444333
No 357
>TIGR02005 PTS-IIBC-alpha PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose.
Probab=23.32 E-value=5.1e+02 Score=22.77 Aligned_cols=40 Identities=13% Similarity=0.060 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHhhc-------------chhHHHHHHHHHHHHHHHHHHHh
Q 045196 78 LMEIPAVVIGTVLLSFT-------------NRRLLLSRSAYVAGSASILCTLF 117 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~-------------grr~~l~~~~~~~~~~~~~~~~~ 117 (255)
++.++..++.+++-+|+ |+|-+.+++...+.+..+.+.+.
T Consensus 140 fgGIi~G~i~a~l~Nkf~~ikLP~~L~FF~G~RfVpIi~~~~~~~l~~~~~~i 192 (524)
T TIGR02005 140 IGAIIISGIITYIHNRFFDKRLPVFLGIFQGTTFVVTIAFFVMLPCAAITCLV 192 (524)
T ss_pred HHHHHHHHHHHHHHHHHhccccchhhhhcCCCcchHhHHHHHHHHHHHHHHHH
Confidence 45666777778888874 67877777766666555554443
No 358
>KOG3088 consensus Secretory carrier membrane protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.80 E-value=3.9e+02 Score=21.21 Aligned_cols=8 Identities=13% Similarity=0.123 Sum_probs=3.1
Q ss_pred cCCCCCch
Q 045196 216 ETKNAPLY 223 (255)
Q Consensus 216 e~~~~~~~ 223 (255)
+..+...+
T Consensus 271 RgsG~sf~ 278 (313)
T KOG3088|consen 271 RGSGASFQ 278 (313)
T ss_pred HhccHhHH
Confidence 33344433
No 359
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=22.46 E-value=1.2e+02 Score=15.06 Aligned_cols=16 Identities=25% Similarity=0.052 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHhh
Q 045196 78 LMEIPAVVIGTVLLSF 93 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr 93 (255)
+.+++.+++.+|+-+|
T Consensus 19 iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 19 IAGIIASLIVGWLRNR 34 (35)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 3445555555555443
No 360
>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate.
Probab=22.43 E-value=3.1e+02 Score=21.24 Aligned_cols=10 Identities=30% Similarity=0.278 Sum_probs=4.2
Q ss_pred HHHHHHHHHH
Q 045196 164 RNIAVSFLRQ 173 (255)
Q Consensus 164 r~~~~~~~~~ 173 (255)
|+..+.+...
T Consensus 197 R~i~f~llgl 206 (256)
T PF09788_consen 197 RAIIFFLLGL 206 (256)
T ss_pred HHHHHHHHHH
Confidence 4444444333
No 361
>PF03116 NQR2_RnfD_RnfE: NQR2, RnfD, RnfE family; InterPro: IPR004338 This family of proteins describes the Nqr2 (NqrB) subunit of the bacterial 6-subunit sodium-translocating NADH-ubiquinone oxidoreductase (i.e. a respiration linked sodium pump). In Vibrio cholerae, it negatively regulates the expression of virulence factors through inhibiting (by an unknown mechanism) the transcription of the transcriptional activator ToxT []. The family also includes RnfD, which is involved in nitrogen fixation. The similarity of RnfD to NADH-ubiquinone oxidoreductases was previously noted [].; GO: 0006810 transport, 0016020 membrane
Probab=22.38 E-value=4.2e+02 Score=21.37 Aligned_cols=22 Identities=18% Similarity=0.372 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHhhcchhHH
Q 045196 78 LMEIPAVVIGTVLLSFTNRRLL 99 (255)
Q Consensus 78 ~~~~~~~~~~g~l~dr~grr~~ 99 (255)
+..++++.+.=++..|+.+|+.
T Consensus 46 ~~av~~a~l~E~l~~~l~~~~~ 67 (313)
T PF03116_consen 46 LVAVLTAVLAEALFAKLRKRPI 67 (313)
T ss_pred HHHHHHHHHHHHHHHHHhcCCC
Confidence 3445556666666666655553
No 362
>PF11283 DUF3084: Protein of unknown function (DUF3084); InterPro: IPR021435 This bacterial family of proteins has no known function.
Probab=22.24 E-value=1.8e+02 Score=17.83 Aligned_cols=17 Identities=18% Similarity=0.139 Sum_probs=8.9
Q ss_pred HHHHHHHhhcchhHHHH
Q 045196 85 VIGTVLLSFTNRRLLLS 101 (255)
Q Consensus 85 ~~~g~l~dr~grr~~l~ 101 (255)
.++-.+..|.|||++-+
T Consensus 18 ~~GD~iG~kvGKkrlsl 34 (79)
T PF11283_consen 18 YLGDRIGSKVGKKRLSL 34 (79)
T ss_pred HHHHHHHHHHhHHHhhh
Confidence 34444455566776543
No 363
>COG3105 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.41 E-value=2e+02 Score=19.65 Aligned_cols=19 Identities=16% Similarity=0.177 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHhhcchh
Q 045196 79 MEIPAVVIGTVLLSFTNRR 97 (255)
Q Consensus 79 ~~~~~~~~~g~l~dr~grr 97 (255)
.+++.+++.|+++-|++.+
T Consensus 13 igLvvGi~IG~li~Rlt~~ 31 (138)
T COG3105 13 IGLVVGIIIGALIARLTNR 31 (138)
T ss_pred HHHHHHHHHHHHHHHHcch
Confidence 3344455556666665543
No 364
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=21.38 E-value=2.2e+02 Score=17.86 Aligned_cols=10 Identities=10% Similarity=0.069 Sum_probs=5.4
Q ss_pred cchHHhhcCh
Q 045196 26 NKNESLWGTK 35 (255)
Q Consensus 26 ~~~~~l~~~~ 35 (255)
..++++.+.+
T Consensus 5 p~f~~L~r~r 14 (91)
T PF04341_consen 5 PEFQELVRRR 14 (91)
T ss_pred HHHHHHHHHH
Confidence 3466666544
No 365
>PTZ00370 STEVOR; Provisional
Probab=21.02 E-value=1.3e+02 Score=23.63 Aligned_cols=23 Identities=26% Similarity=0.441 Sum_probs=10.4
Q ss_pred hHHHHHHHHHHHHHHHHhccCCC
Q 045196 197 FLVFGALSIFSGVLSLWLPETKN 219 (255)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~e~~~ 219 (255)
-++..++.++.+++..|+.+++.
T Consensus 261 alvllil~vvliilYiwlyrrRK 283 (296)
T PTZ00370 261 ALVLLILAVVLIILYIWLYRRRK 283 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 34444444444444455544433
No 366
>COG1972 NupC Nucleoside permease [Nucleotide transport and metabolism]
Probab=20.80 E-value=3e+02 Score=22.92 Aligned_cols=65 Identities=14% Similarity=0.120 Sum_probs=33.0
Q ss_pred hccccchhcHHHHHHHHHHHHHHhhhhhhhHHHhhhcCCCchhHHHHHHHH-HHHHHH--HHhccCCCCC
Q 045196 155 CVELFPTNVRNIAVSFLRQALMLGASVSPLLVVVGRMSPSLSFLVFGALSI-FSGVLS--LWLPETKNAP 221 (255)
Q Consensus 155 ~~e~~p~~~r~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~e~~~~~ 221 (255)
+.+..+.=.|++-+.+.. +..+++-++.+.++...+....+++.+.+.- .+.++. ...|+|.+.+
T Consensus 154 vk~~l~~mt~selftv~~--~gmasVsgsilg~Y~~mgvp~~yllaAs~m~~p~gli~Akii~P~t~~~~ 221 (404)
T COG1972 154 VKPYLGKMSRSELFTVMA--SGMASVSGSILGGYASMGVPPEYLLAASFMNAPGGLLFAKLINPYTEDEQ 221 (404)
T ss_pred hHHhhhhccHhHHHHHHH--hhHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcchHHHHHHhcCCCCCCcc
Confidence 334444444555444432 3345555666666655555555666554432 333333 3458876654
No 367
>PF05814 DUF843: Baculovirus protein of unknown function (DUF843); InterPro: IPR008561 This family consists of several unidentified baculovirus proteins of around 85 residues long with no known function.
Probab=20.44 E-value=2.3e+02 Score=17.60 Aligned_cols=24 Identities=8% Similarity=-0.024 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHH
Q 045196 81 IPAVVIGTVLLSFTNRRLLLSRSA 104 (255)
Q Consensus 81 ~~~~~~~g~l~dr~grr~~l~~~~ 104 (255)
+++-++.|++.||.-+-.-+++..
T Consensus 7 ~~~Li~~~fi~~k~~~~s~li~~~ 30 (83)
T PF05814_consen 7 FLALIVLGFIFDKNEGFSELIITL 30 (83)
T ss_pred HHHHHHHHHHHccccchHHHHHHH
Confidence 344566777888774333333333
Done!