BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045199
         (82 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|B0D0N9|SEY1_LACBS Protein SEY1 OS=Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686)
           GN=SEY1 PE=3 SV=1
          Length = 785

 Score = 32.7 bits (73), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 26/56 (46%)

Query: 2   VPEDGDEDDETTEILLKFRDQIRNLLDTRNLCPPGDFSITFQLPGCLDDQQFNGDF 57
           VP     DD+     +K +DQ  +L+   +   P D S+ F LP   +D   N DF
Sbjct: 592 VPRVWKPDDDIDSAFMKAKDQTLDLVPLYSKISPKDTSLEFNLPSESNDSFSNDDF 647


>sp|P38817|GGA2_YEAST ADP-ribosylation factor-binding protein GGA2 OS=Saccharomyces
           cerevisiae (strain ATCC 204508 / S288c) GN=GGA2 PE=1
           SV=1
          Length = 585

 Score = 32.3 bits (72), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 4   EDGDEDDETTEILLKFRDQIRNLLDTRNLCPPGDFSITFQL-PGCLDD--QQFNGDFTDG 60
           E+  EDD   + LLKF D +  LL+  NL   GD +   Q+ P  +    QQ +G  T+ 
Sbjct: 290 EEEQEDDALVQDLLKFNDTVNQLLEKFNLLKNGDSNAASQIHPSHVSAPLQQSSGALTNE 349

Query: 61  I 61
           I
Sbjct: 350 I 350


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.146    0.449 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,013,936
Number of Sequences: 539616
Number of extensions: 1177466
Number of successful extensions: 1915
Number of sequences better than 100.0: 2
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1913
Number of HSP's gapped (non-prelim): 2
length of query: 82
length of database: 191,569,459
effective HSP length: 53
effective length of query: 29
effective length of database: 162,969,811
effective search space: 4726124519
effective search space used: 4726124519
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)