Query 045199
Match_columns 82
No_of_seqs 57 out of 59
Neff 2.6
Searched_HMMs 29240
Date Mon Mar 25 19:01:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045199.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045199hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fei_A Heat shock protein-rela 99.3 1.1E-12 3.7E-17 83.6 4.1 43 34-77 59-101 (102)
2 3gla_A Low molecular weight he 99.2 5.7E-12 1.9E-16 78.9 4.2 40 32-71 60-99 (100)
3 3q9p_A Heat shock protein beta 99.2 8.2E-12 2.8E-16 77.9 4.2 37 34-70 48-85 (85)
4 4eld_A MJ16.5-P1, small heat s 99.2 8.3E-12 2.8E-16 84.9 4.6 43 34-76 115-160 (161)
5 2wj5_A Heat shock protein beta 99.1 6.2E-11 2.1E-15 75.9 4.4 33 37-69 55-88 (101)
6 3l1e_A Alpha-crystallin A chai 99.1 6.7E-11 2.3E-15 76.4 4.5 42 36-77 55-105 (106)
7 1gme_A Heat shock protein 16.9 99.1 7.9E-11 2.7E-15 80.1 4.7 39 32-70 100-138 (151)
8 3aab_A Putative uncharacterize 99.0 8.7E-11 3E-15 76.6 3.2 42 34-76 80-122 (123)
9 2y1y_A Alpha-crystallin B chai 99.0 1.6E-10 5.6E-15 72.2 3.9 35 37-71 50-85 (90)
10 2klr_A Alpha-crystallin B chai 98.9 6.2E-10 2.1E-14 78.4 4.0 41 37-77 117-162 (175)
11 2bol_A TSP36, small heat shock 98.8 2.7E-09 9.3E-14 81.3 5.2 44 33-76 151-197 (314)
12 2bol_A TSP36, small heat shock 98.8 1.1E-09 3.6E-14 83.5 2.9 40 31-70 275-314 (314)
13 2xcm_C SGT1-like protein, cyto 97.0 0.00056 1.9E-08 41.2 3.4 37 35-71 46-82 (92)
14 1rl1_A Suppressor of G2 allele 96.9 0.0011 3.7E-08 41.8 3.8 36 36-71 54-89 (114)
15 2k8q_A Protein SHQ1; beta-sand 95.7 0.009 3.1E-07 41.6 3.6 37 33-71 44-83 (134)
16 3eud_A Protein SHQ1; CS domain 93.8 0.073 2.5E-06 36.5 4.1 34 38-71 61-97 (115)
17 2cg9_X CO-chaperone protein SB 83.1 1 3.5E-05 29.7 3.1 34 37-70 63-97 (134)
18 3gla_A Low molecular weight he 82.6 2 7E-05 26.0 4.2 34 35-69 13-46 (100)
19 3q9p_A Heat shock protein beta 79.7 1.9 6.6E-05 26.0 3.3 33 36-69 7-39 (85)
20 3l1e_A Alpha-crystallin A chai 75.6 2.9 0.0001 26.2 3.4 33 35-68 11-43 (106)
21 3aab_A Putative uncharacterize 74.7 4.8 0.00017 25.4 4.3 35 35-70 33-68 (123)
22 2y1y_A Alpha-crystallin B chai 72.9 4.1 0.00014 24.6 3.4 33 35-68 5-37 (90)
23 1x5m_A Calcyclin-binding prote 72.8 5.7 0.0002 25.4 4.3 35 37-71 69-104 (127)
24 1ejf_A Progesterone receptor P 70.9 3.2 0.00011 26.6 2.8 35 37-71 48-82 (125)
25 2wj5_A Heat shock protein beta 69.0 5.5 0.00019 24.6 3.5 33 35-68 10-42 (101)
26 3qor_A Nuclear migration prote 68.1 5.5 0.00019 25.5 3.5 35 37-71 62-97 (121)
27 1wh0_A Ubiquitin carboxyl-term 64.9 6.1 0.00021 26.3 3.3 35 37-71 78-112 (134)
28 4eld_A MJ16.5-P1, small heat s 62.4 10 0.00036 25.0 4.0 35 35-70 65-99 (161)
29 1wfi_A Nuclear distribution ge 54.4 11 0.00036 24.2 2.9 34 38-71 54-88 (131)
30 1gme_A Heat shock protein 16.9 52.4 21 0.00072 23.5 4.2 34 35-69 52-86 (151)
31 1wgv_A KIAA1068 protein; CS do 47.7 25 0.00084 22.3 3.9 33 38-70 68-101 (124)
32 2kmw_A Uncharacterized protein 47.4 14 0.00048 24.8 2.8 34 37-71 49-82 (150)
33 1wi8_A EIF-4B, eukaryotic tran 41.9 12 0.0004 21.8 1.5 29 42-70 21-50 (104)
34 2dng_A Eukaryotic translation 39.9 15 0.00051 21.3 1.7 29 42-70 21-50 (103)
35 1q5l_A Chaperone protein DNAK; 38.6 27 0.00092 22.7 3.0 42 36-77 83-130 (135)
36 2j76_E EIF-4B, EIF4B, eukaryot 37.4 19 0.00066 21.0 2.0 29 42-70 25-54 (100)
37 2o30_A Nuclear movement protei 34.9 24 0.00081 22.6 2.3 31 39-69 49-79 (131)
38 3igf_A ALL4481 protein; two-do 31.8 49 0.0017 25.0 3.9 35 35-69 334-369 (374)
39 2rh0_A NUDC domain-containing 28.7 58 0.002 21.7 3.5 33 39-71 58-91 (157)
40 2kwv_A RAD30 homolog B, DNA po 28.6 20 0.00069 21.4 1.0 13 43-55 11-23 (48)
41 3h0x_A 78 kDa glucose-regulate 27.6 64 0.0022 21.2 3.5 43 35-77 65-113 (152)
42 3dqg_A Heat shock 70 kDa prote 27.5 75 0.0026 21.0 3.8 43 35-77 65-113 (151)
43 3dob_A Heat shock 70 kDa prote 25.4 70 0.0024 21.2 3.4 43 35-77 65-113 (152)
44 2doa_A RNA polymerase II elong 24.5 21 0.00072 23.8 0.6 17 20-37 87-103 (104)
45 1z0n_A 5'-AMP-activated protei 24.2 98 0.0033 18.9 3.7 36 32-67 5-50 (96)
46 1wez_A HnRNP H', FTP-3, hetero 23.4 26 0.0009 20.9 0.9 30 41-70 20-50 (102)
47 4e81_A Chaperone protein DNAK; 22.9 80 0.0027 22.1 3.4 42 35-76 66-113 (219)
48 1vmo_A Vitelline membrane oute 20.7 33 0.0011 23.9 1.0 21 29-52 22-42 (163)
49 3fcg_A F1 capsule-anchoring pr 20.4 28 0.00094 22.3 0.5 32 30-71 40-71 (90)
50 1nh2_C Transcription initiatio 20.3 33 0.0011 22.0 0.9 37 5-64 26-62 (79)
No 1
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.32 E-value=1.1e-12 Score=83.57 Aligned_cols=43 Identities=16% Similarity=0.286 Sum_probs=40.0
Q ss_pred CCCceEEEEeCCCCCCcccccccccCceEEEEeecCCcCceeee
Q 045199 34 PPGDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKKVTRSIQLR 77 (82)
Q Consensus 34 PpG~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~k~rsI~i~ 77 (82)
..|.|+|+|.||..||++.++|+|+||+|+|.+||.++ +|+++
T Consensus 59 ~~g~f~R~~~LP~~vd~~~i~A~~~~GvL~I~lpK~~~-~~d~~ 101 (102)
T 4fei_A 59 PSGRFVRELAFPEPVRPASGVASLAGGVLTVRFEKLRP-TIDVT 101 (102)
T ss_dssp EEEEEEEEEECSSCBCTTCCEEEEETTEEEEEEEBSSC-CCCCC
T ss_pred eccEEEEEEECCCCcchhHcEEEEECCEEEEEEEccCc-cccCC
Confidence 67999999999999999999999999999999999877 77765
No 2
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.24 E-value=5.7e-12 Score=78.93 Aligned_cols=40 Identities=20% Similarity=0.270 Sum_probs=36.0
Q ss_pred CCCCCceEEEEeCCCCCCcccccccccCceEEEEeecCCc
Q 045199 32 LCPPGDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKKVT 71 (82)
Q Consensus 32 LCPpG~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~k~ 71 (82)
-...|.|+|+|.||..||++.++|+|+||||+|.+||...
T Consensus 60 er~~g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 60 ERRYGSFHRRFALPDSADADGITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CCCCEEEEEEEECCTTBCTTSCEEEEETTEEEEEEEBC--
T ss_pred eecceEEEEEEECCCCcChHHeEEEEeCCEEEEEEecCCC
Confidence 4568999999999999999999999999999999999753
No 3
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.22 E-value=8.2e-12 Score=77.89 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=34.8
Q ss_pred CCCceEEEEeCCCCCCccccccccc-CceEEEEeecCC
Q 045199 34 PPGDFSITFQLPGCLDDQQFNGDFT-DGIFIGVVKKKV 70 (82)
Q Consensus 34 PpG~FsrSF~lPgpVD~~~~sa~F~-DGILe~vVpK~k 70 (82)
..|+|+|+|+||..||++.++|+|+ ||+|+|.+||.|
T Consensus 48 ~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lPK~k 85 (85)
T 3q9p_A 48 ISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMPK 85 (85)
T ss_dssp CCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEECCC
T ss_pred EEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEEcCC
Confidence 4689999999999999999999997 999999999975
No 4
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.22 E-value=8.3e-12 Score=84.87 Aligned_cols=43 Identities=16% Similarity=0.449 Sum_probs=38.9
Q ss_pred CCCceEEEEeCCCCCCcccccccccCceEEEEeecC---CcCceee
Q 045199 34 PPGDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKK---VTRSIQL 76 (82)
Q Consensus 34 PpG~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~---k~rsI~i 76 (82)
..|.|+|+|.||..||++.++|+|+||||+|.+||. ++|.|+|
T Consensus 115 ~~g~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lpK~~~~~~r~I~I 160 (161)
T 4eld_A 115 EEEEIYRTIKLPATVKEENASAKFENGVLSVILPKAESSIKKGINI 160 (161)
T ss_dssp CCCEEEEEEECSSCBCGGGCEEEEETTEEEEEEEBCGGGSCCCCCC
T ss_pred ccccEEEEEECCCCcccccEEEEEECCEEEEEEEcCCCCCCcEeec
Confidence 689999999999999999999999999999999993 4566665
No 5
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.11 E-value=6.2e-11 Score=75.86 Aligned_cols=33 Identities=15% Similarity=0.360 Sum_probs=31.5
Q ss_pred ceEEEEeCCCCCCcccccccc-cCceEEEEeecC
Q 045199 37 DFSITFQLPGCLDDQQFNGDF-TDGIFIGVVKKK 69 (82)
Q Consensus 37 ~FsrSF~lPgpVD~~~~sa~F-~DGILe~vVpK~ 69 (82)
+|+|+|.||.+||++.++|+| .||+|+|.+||.
T Consensus 55 eF~R~~~LP~~vd~~~i~A~~s~nGvL~I~lPK~ 88 (101)
T 2wj5_A 55 EFHRRYRLPPGVDPAAVTSALSPEGVLSIQATPA 88 (101)
T ss_dssp EEEEEEECCTTBCTTCCEEEECTTSEEEEEECBC
T ss_pred EEEEEEECCCCcChhHCEEEECCCCEEEEEEECC
Confidence 499999999999999999999 899999999993
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.11 E-value=6.7e-11 Score=76.44 Aligned_cols=42 Identities=21% Similarity=0.401 Sum_probs=36.5
Q ss_pred CceEEEEeCCCCCCcccccccc-cCceEEEEeecC--------CcCceeee
Q 045199 36 GDFSITFQLPGCLDDQQFNGDF-TDGIFIGVVKKK--------VTRSIQLR 77 (82)
Q Consensus 36 G~FsrSF~lPgpVD~~~~sa~F-~DGILe~vVpK~--------k~rsI~i~ 77 (82)
.+|+|+|+||..||++.++|+| +||+|+|.+||. ++|.|.|.
T Consensus 55 ~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 55 REFHRRYRLPSNVDQSALSCSLSADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EEEEEEEECCTTBCTTSCEEEECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred EEEEEEEECCCCcChhHcEEEECCCCEEEEEEEccCcccccCCCCeEeeec
Confidence 3599999999999999999999 899999999994 34566653
No 7
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.09 E-value=7.9e-11 Score=80.07 Aligned_cols=39 Identities=18% Similarity=0.253 Sum_probs=36.2
Q ss_pred CCCCCceEEEEeCCCCCCcccccccccCceEEEEeecCC
Q 045199 32 LCPPGDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKKV 70 (82)
Q Consensus 32 LCPpG~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~k 70 (82)
-...|.|+|+|.||.+||.+.++|+|+||||+|.+||..
T Consensus 100 Er~~g~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~ 138 (151)
T 1gme_A 100 ERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAE 138 (151)
T ss_dssp CCCCCCEEEEEECSSCCCGGGCEEEEETTEEEEEEECCC
T ss_pred eEeccEEEEEEECCCCccccceEEEEECCEEEEEEEccC
Confidence 356899999999999999999999999999999999943
No 8
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.05 E-value=8.7e-11 Score=76.62 Aligned_cols=42 Identities=14% Similarity=0.251 Sum_probs=37.1
Q ss_pred CCCceEEEEeCCCCCCcccc-cccccCceEEEEeecCCcCceee
Q 045199 34 PPGDFSITFQLPGCLDDQQF-NGDFTDGIFIGVVKKKVTRSIQL 76 (82)
Q Consensus 34 PpG~FsrSF~lPgpVD~~~~-sa~F~DGILe~vVpK~k~rsI~i 76 (82)
.. .|+|+|.||..||++.+ +|+|+||+|+|.+||..+..|.|
T Consensus 80 ~~-~f~R~~~LP~~vd~~~i~~A~~~~GvL~I~lPK~~~~~I~I 122 (123)
T 3aab_A 80 PK-YVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAGTSVFKF 122 (123)
T ss_dssp CS-EEEEEEECSSEECTTCCCEEEEETTEEEEEEEGGGEECSCC
T ss_pred eE-EEEEEEECCCCcCcchhCeeEEcCCEEEEEEEcCCCCcccc
Confidence 44 89999999999999999 99999999999999966544554
No 9
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.03 E-value=1.6e-10 Score=72.22 Aligned_cols=35 Identities=17% Similarity=0.401 Sum_probs=31.9
Q ss_pred ceEEEEeCCCCCCcccccccc-cCceEEEEeecCCc
Q 045199 37 DFSITFQLPGCLDDQQFNGDF-TDGIFIGVVKKKVT 71 (82)
Q Consensus 37 ~FsrSF~lPgpVD~~~~sa~F-~DGILe~vVpK~k~ 71 (82)
+|+|+|.||..||++.++|+| .||||+|.+||...
T Consensus 50 ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK~~~ 85 (90)
T 2y1y_A 50 EFHRKYRIPADVDPLTITSSMSSDGVLTVNGPRKQV 85 (90)
T ss_dssp EEEEEEECCTTBCGGGCEEEECTTSEEEEEECBC--
T ss_pred EEEEEEECCCCcChhHcEEEECCCCEEEEEEEcCCC
Confidence 599999999999999999999 89999999999543
No 10
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=98.93 E-value=6.2e-10 Score=78.37 Aligned_cols=41 Identities=20% Similarity=0.447 Sum_probs=31.7
Q ss_pred ceEEEEeCCCCCCcccccccc-cCceEEEEeecCC----cCceeee
Q 045199 37 DFSITFQLPGCLDDQQFNGDF-TDGIFIGVVKKKV----TRSIQLR 77 (82)
Q Consensus 37 ~FsrSF~lPgpVD~~~~sa~F-~DGILe~vVpK~k----~rsI~i~ 77 (82)
+|+|+|.||..||++.++|+| +||||+|.+||.. .|.|+|.
T Consensus 117 eF~R~~~LP~~Vd~~~i~A~~s~dGvL~I~lPK~~~~~~~r~I~I~ 162 (175)
T 2klr_A 117 EFHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQVSGPERTIPIT 162 (175)
T ss_dssp EEEEEEECTTTCCTTTCEEEECTTSCEEEEEECC------------
T ss_pred EEEEEEECCCCcChhHeEEEEcCCCEEEEEEECCCCCCCCeEEEEe
Confidence 499999999999999999999 7999999999943 3677764
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=98.84 E-value=2.7e-09 Score=81.26 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=38.9
Q ss_pred CCCCceEEEEeCCCCCCccccccccc-CceEEEEeecCC--cCceee
Q 045199 33 CPPGDFSITFQLPGCLDDQQFNGDFT-DGIFIGVVKKKV--TRSIQL 76 (82)
Q Consensus 33 CPpG~FsrSF~lPgpVD~~~~sa~F~-DGILe~vVpK~k--~rsI~i 76 (82)
-..|+|+|+|.||..||++.++|+|+ ||||+|.+||.. .++|.|
T Consensus 151 r~~g~F~R~~~LP~~Vd~e~i~A~~~~nGVL~I~lPK~~~~~~~I~i 197 (314)
T 2bol_A 151 AMSESVGRSIPLPPSVDRNHIQATITTDDVLVIEAPVNEPNYKAIKL 197 (314)
T ss_dssp CBCCCEEEEEECCTTBCGGGCEEEECSSSEEEEEEEBSSCCTTTEEE
T ss_pred EEEEEEEEEEECCCCccccccEEEEeCCCEEEEEEeccCcccceeec
Confidence 67899999999999999999999998 999999999944 345654
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=98.84 E-value=1.1e-09 Score=83.52 Aligned_cols=40 Identities=15% Similarity=0.255 Sum_probs=34.8
Q ss_pred cCCCCCceEEEEeCCCCCCcccccccccCceEEEEeecCC
Q 045199 31 NLCPPGDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKKV 70 (82)
Q Consensus 31 ~LCPpG~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~k 70 (82)
.--.+|.|+|+|.||..||++.++|+|+||||+|.+||-|
T Consensus 275 ~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 275 SHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVEAPLFK 314 (314)
T ss_dssp ----CEEEEEEEECSSEECGGGCEEEEETTEEEEEEEEEC
T ss_pred EEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEEEecCC
Confidence 4567999999999999999999999999999999999954
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=97.02 E-value=0.00056 Score=41.21 Aligned_cols=37 Identities=8% Similarity=-0.024 Sum_probs=33.9
Q ss_pred CCceEEEEeCCCCCCcccccccccCceEEEEeecCCc
Q 045199 35 PGDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKKVT 71 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~k~ 71 (82)
..+|.+.+.|+++||++.-+.++.+|.|++.+.|+.+
T Consensus 46 ~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 46 EDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKADI 82 (92)
T ss_dssp SCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBSSS
T ss_pred CcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcCCC
Confidence 3579999999999999999999999999999999754
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=96.86 E-value=0.0011 Score=41.83 Aligned_cols=36 Identities=14% Similarity=0.038 Sum_probs=33.2
Q ss_pred CceEEEEeCCCCCCcccccccccCceEEEEeecCCc
Q 045199 36 GDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKKVT 71 (82)
Q Consensus 36 G~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~k~ 71 (82)
.+|.+.+.|+++||++..+.++.+|.|++.+.|+.+
T Consensus 54 ~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 54 EDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEA 89 (114)
T ss_dssp SEEEEEECBSSCCCGGGEEEEECSSSEEEEEECSSC
T ss_pred cEEEEEeeCCCcCCccccEEEEECCEEEEEEEcCCC
Confidence 479999999999999999999999999999999654
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=95.69 E-value=0.009 Score=41.58 Aligned_cols=37 Identities=22% Similarity=0.361 Sum_probs=32.4
Q ss_pred CCCCceEEEEeCCCCC-Ccccccccc--cCceEEEEeecCCc
Q 045199 33 CPPGDFSITFQLPGCL-DDQQFNGDF--TDGIFIGVVKKKVT 71 (82)
Q Consensus 33 CPpG~FsrSF~lPgpV-D~~~~sa~F--~DGILe~vVpK~k~ 71 (82)
||| |-+..+||++| |.+.-+|+| ..|.|++.+||..+
T Consensus 44 ~~P--YyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLpK~~~ 83 (134)
T 2k8q_A 44 LSP--YYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNK 83 (134)
T ss_dssp SSS--SCEEECCSSCEECCSSCEEEEETTTTEEEEEEEESST
T ss_pred cCC--eEEEecCCCeeecCCCcceeEeccCCEEEEEEeCCCC
Confidence 554 77889999999 999999999 69999999999543
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=93.81 E-value=0.073 Score=36.51 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=30.2
Q ss_pred eEEEEeCCCCC-Ccccccccc--cCceEEEEeecCCc
Q 045199 38 FSITFQLPGCL-DDQQFNGDF--TDGIFIGVVKKKVT 71 (82)
Q Consensus 38 FsrSF~lPgpV-D~~~~sa~F--~DGILe~vVpK~k~ 71 (82)
|-+..+||++| |.+.-+|+| .+|.|.+.+||..+
T Consensus 61 YyLRL~lP~~vved~~~~A~YD~d~g~~~v~lpK~~~ 97 (115)
T 3eud_A 61 YYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNK 97 (115)
T ss_dssp EEEEEECSSCEECSTTCEEEEETTTTEEEEEEEESST
T ss_pred eEEEEecCcceecCCCcceEEeCCCcEEEEEEcCCcC
Confidence 77889999999 878889999 79999999999654
No 17
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=83.06 E-value=1 Score=29.70 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=30.5
Q ss_pred ceEEEEeCCCCCCcccccccccCce-EEEEeecCC
Q 045199 37 DFSITFQLPGCLDDQQFNGDFTDGI-FIGVVKKKV 70 (82)
Q Consensus 37 ~FsrSF~lPgpVD~~~~sa~F~DGI-Le~vVpK~k 70 (82)
.|...+.|.++|||+.-+.+..++- +++++.|+.
T Consensus 63 ~y~~~l~L~~~Idpe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 63 HYQLHIDLYKEIIPEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp EBCEEEECSSCCCSSSEEEEECCC--CEEEEEECS
T ss_pred eEEEEEEChhhccccccEEEECCCEEEEEEEEECC
Confidence 6899999999999999999998888 999999976
No 18
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=82.58 E-value=2 Score=25.96 Aligned_cols=34 Identities=26% Similarity=0.414 Sum_probs=29.9
Q ss_pred CCceEEEEeCCCCCCcccccccccCceEEEEeecC
Q 045199 35 PGDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKK 69 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~ 69 (82)
...|.+.+.||| |+++.++-++.++.|.|.--+.
T Consensus 13 ~~~~~v~~~lPG-~~~edi~v~~~~~~L~I~g~~~ 46 (100)
T 3gla_A 13 VNHFVLYADLPG-IDPSQIEVQMDKGILSIRGERK 46 (100)
T ss_dssp SSEEEEEEECTT-SCGGGCEEEEETTEEEEEEEEC
T ss_pred CCEEEEEEECCC-CCHHHEEEEEECCEEEEEEEEc
Confidence 468999999998 8999999999999999986553
No 19
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=79.68 E-value=1.9 Score=25.99 Aligned_cols=33 Identities=9% Similarity=0.192 Sum_probs=29.3
Q ss_pred CceEEEEeCCCCCCcccccccccCceEEEEeecC
Q 045199 36 GDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKK 69 (82)
Q Consensus 36 G~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~ 69 (82)
..|.+.+.||| |+++.++-+..||.|.|.--+.
T Consensus 7 ~~~~v~~dlPG-~~~edi~V~v~~~~L~I~g~~~ 39 (85)
T 3q9p_A 7 DRWRVSLDVNH-FAPDELTVKTKDGVVEITGKHA 39 (85)
T ss_dssp CEEEEEEECTT-TCCSEEEEEEETTEEEEEEEEC
T ss_pred CEEEEEEECCC-CChHHEEEEEECCEEEEEEEEc
Confidence 57999999999 7999999999999999887653
No 20
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=75.64 E-value=2.9 Score=26.21 Aligned_cols=33 Identities=9% Similarity=0.099 Sum_probs=28.9
Q ss_pred CCceEEEEeCCCCCCcccccccccCceEEEEeec
Q 045199 35 PGDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKK 68 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK 68 (82)
...|.+.+.||| ++++.++-++.+|.|.|.--+
T Consensus 11 ~~~~~v~~dlPG-~~~edi~V~v~~~~L~I~g~~ 43 (106)
T 3l1e_A 11 RDKFVIFLDVKH-FSPEDLTVKVQEDFVEIHGKH 43 (106)
T ss_dssp SSEEEEEEECTT-SCGGGEEEEEETTEEEEEEEE
T ss_pred CCEEEEEEECCC-CChHHEEEEEECCEEEEEEEE
Confidence 467999999998 799999999999999988744
No 21
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=74.69 E-value=4.8 Score=25.42 Aligned_cols=35 Identities=11% Similarity=0.316 Sum_probs=30.7
Q ss_pred CCceEEEEeCCCCCCcccccccccC-ceEEEEeecCC
Q 045199 35 PGDFSITFQLPGCLDDQQFNGDFTD-GIFIGVVKKKV 70 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~sa~F~D-GILe~vVpK~k 70 (82)
.+.|.+.+.||| |+++.++-+..+ +.|.|..-+..
T Consensus 33 ~~~~~v~~~lPG-~~~edi~V~v~~~~~L~I~g~~~~ 68 (123)
T 3aab_A 33 GGYLVVVADLAG-FNKEKIKARVSGQNELIIEAEREI 68 (123)
T ss_dssp TTEEEEEEECCS-CCGGGCEEEEETTTEEEEEEECCC
T ss_pred CCEEEEEEECCC-CCHHHEEEEEeCCCEEEEEEEEec
Confidence 478999999998 899999999988 99999887643
No 22
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=72.87 E-value=4.1 Score=24.59 Aligned_cols=33 Identities=9% Similarity=0.159 Sum_probs=28.4
Q ss_pred CCceEEEEeCCCCCCcccccccccCceEEEEeec
Q 045199 35 PGDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKK 68 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK 68 (82)
...|.+.+.||| |+++.++-+..|+.|.|.--+
T Consensus 5 ~~~~~v~~dlPG-~~~edi~V~v~~~~L~I~g~~ 37 (90)
T 2y1y_A 5 KDRFSVNLDVKH-FSPEELKVKVLGDVIEVHGKH 37 (90)
T ss_dssp -CCEEEEEECTT-SCGGGEEEEEETTEEEEEEEE
T ss_pred CCEEEEEEECCC-CcHHHeEEEEECCEEEEEEEE
Confidence 357999999997 799999999999999987754
No 23
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.75 E-value=5.7 Score=25.44 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=31.2
Q ss_pred ceEEEEe-CCCCCCcccccccccCceEEEEeecCCc
Q 045199 37 DFSITFQ-LPGCLDDQQFNGDFTDGIFIGVVKKKVT 71 (82)
Q Consensus 37 ~FsrSF~-lPgpVD~~~~sa~F~DGILe~vVpK~k~ 71 (82)
+|...+. |-++||++.-+-+..++-+++.+.|+.+
T Consensus 69 ~y~~~~~~L~~~I~~e~S~~~v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 69 SYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVE 104 (127)
T ss_dssp CEEEEEECBSSCCCTTTCEEEEETTEEEEEEECSSS
T ss_pred cEEEEhHHhcCccCcccCEEEEeCCEEEEEEEECCC
Confidence 7999995 9999999998888888999999999764
No 24
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=70.86 E-value=3.2 Score=26.64 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=31.4
Q ss_pred ceEEEEeCCCCCCcccccccccCceEEEEeecCCc
Q 045199 37 DFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKKVT 71 (82)
Q Consensus 37 ~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~k~ 71 (82)
+|.....|-++||++.-+-+..+.-+++++.|+.+
T Consensus 48 ~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 48 KHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp EEEEEEEBSSCEEEEEEEEEECSSCEEEEEEESST
T ss_pred eEEEEEEccceeccccCEEEECCCEEEEEEEECCC
Confidence 49999999999999999999888899999999753
No 25
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=68.98 E-value=5.5 Score=24.64 Aligned_cols=33 Identities=12% Similarity=0.234 Sum_probs=28.9
Q ss_pred CCceEEEEeCCCCCCcccccccccCceEEEEeec
Q 045199 35 PGDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKK 68 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK 68 (82)
...|.+.+.||| ++++.++-++.||.|.|.--+
T Consensus 10 ~~~~~v~~dlPG-~~~edI~V~v~~~~L~I~g~~ 42 (101)
T 2wj5_A 10 PGYFSVLLDVKH-FSPEEISVKVVGDHVEVHARH 42 (101)
T ss_dssp SSCEEEEEECTT-SCGGGEEEEEETTEEEEEEEE
T ss_pred CCEEEEEEECCC-CcHHHeEEEEECCEEEEEEEE
Confidence 467999999997 799999999999999987765
No 26
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=68.11 E-value=5.5 Score=25.53 Aligned_cols=35 Identities=14% Similarity=-0.006 Sum_probs=29.6
Q ss_pred ceEEEEeCCCCCCcccccccccCc-eEEEEeecCCc
Q 045199 37 DFSITFQLPGCLDDQQFNGDFTDG-IFIGVVKKKVT 71 (82)
Q Consensus 37 ~FsrSF~lPgpVD~~~~sa~F~DG-ILe~vVpK~k~ 71 (82)
++-+.-.|.++|+++.-+-...|| .|++.+-|+.+
T Consensus 62 ~~~~~g~L~~~I~~deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 62 PAIIDGELYNEVKVEESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp CCSEEEEBSSCBCGGGCEEEEETTTEEEEEEEBSSS
T ss_pred ceEEeccccccccccccEEEEcCCCEEEEEEEECCC
Confidence 356788999999999988888888 99999998643
No 27
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=64.90 E-value=6.1 Score=26.30 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=31.3
Q ss_pred ceEEEEeCCCCCCcccccccccCceEEEEeecCCc
Q 045199 37 DFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKKVT 71 (82)
Q Consensus 37 ~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~k~ 71 (82)
.|.....|-++|||+.-+-+..+.-+++.+.|+..
T Consensus 78 ~y~~~~~L~~~I~pe~S~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 78 TFRWQVKLRNLIEPEQCTFCFTASRIDICLRKRQS 112 (134)
T ss_dssp CEEEEEEBSSCEEEEEEEEEECSSEEEEEEEESSS
T ss_pred eEEEeccccccCCchhCEEEEeCCEEEEEEEECCC
Confidence 78888899999999999989989999999999653
No 28
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=62.36 E-value=10 Score=24.99 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=30.4
Q ss_pred CCceEEEEeCCCCCCcccccccccCceEEEEeecCC
Q 045199 35 PGDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKKV 70 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~k 70 (82)
...|.+.+.||| |+++.++-+..||.|.|.--+..
T Consensus 65 ~~~~~v~~dlPG-~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 65 DQHIKVIAWLPG-VNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp SSEEEEEEECTT-CCGGGEEEEEETTEEEEEEECCC
T ss_pred CCEEEEEEECCC-CChHhEEEEEECCEEEEEEEEcc
Confidence 468999999999 79999999999999999876643
No 29
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=54.36 E-value=11 Score=24.19 Aligned_cols=34 Identities=12% Similarity=-0.022 Sum_probs=28.7
Q ss_pred eEEEEeCCCCCCcccccccccCc-eEEEEeecCCc
Q 045199 38 FSITFQLPGCLDDQQFNGDFTDG-IFIGVVKKKVT 71 (82)
Q Consensus 38 FsrSF~lPgpVD~~~~sa~F~DG-ILe~vVpK~k~ 71 (82)
+-+.-.|.++|+++.-+-+..|| .+++.+-|+.+
T Consensus 54 ~~~~~~L~~~I~~e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 54 PVVDGELYNEVKVEESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp CSBCSCBSSCBCSTTCEEEEETTTEEEEEEEBSSS
T ss_pred EEEecccccccccccCEEEEcCCCEEEEEEEECCC
Confidence 44677899999999988888888 89999999654
No 30
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=52.39 E-value=21 Score=23.49 Aligned_cols=34 Identities=12% Similarity=0.345 Sum_probs=29.1
Q ss_pred CCceEEEEeCCCCCCcccccccc-cCceEEEEeecC
Q 045199 35 PGDFSITFQLPGCLDDQQFNGDF-TDGIFIGVVKKK 69 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~sa~F-~DGILe~vVpK~ 69 (82)
...|.+.+.||| |+++.++-+. .++.|.|.--+.
T Consensus 52 ~d~~~v~~dlPG-v~kedI~V~v~~~~~L~I~g~~~ 86 (151)
T 1gme_A 52 PEAHVFKADLPG-VKKEEVKVEVEDGNVLVVSGERT 86 (151)
T ss_dssp SSEEEEEEECTT-CCGGGEEEEEETTTEEEEEECCC
T ss_pred CCEEEEEEECCC-CChHHEEEEEecCCEEEEEEEEc
Confidence 478999999998 7999999999 567999987664
No 31
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=47.72 E-value=25 Score=22.29 Aligned_cols=33 Identities=9% Similarity=-0.024 Sum_probs=28.1
Q ss_pred eEEEEeCCCCCCcccccccccCce-EEEEeecCC
Q 045199 38 FSITFQLPGCLDDQQFNGDFTDGI-FIGVVKKKV 70 (82)
Q Consensus 38 FsrSF~lPgpVD~~~~sa~F~DGI-Le~vVpK~k 70 (82)
+-+.-.|.++|+++.-+-+..||- |++.+.|+.
T Consensus 68 ~~~~~~L~~~I~~e~S~w~i~~~k~v~i~L~K~~ 101 (124)
T 1wgv_A 68 VLMEGKLTHKINTESSLWSLEPGKCVLVNLSKVG 101 (124)
T ss_dssp EEEEEEBSSCBCTTTCEEEECTTSEEEEEECBSS
T ss_pred eEEcccccCcCCCcCCEEEEeCCCEEEEEEEECC
Confidence 567888999999999888888885 999999964
No 32
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=47.41 E-value=14 Score=24.81 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=29.1
Q ss_pred ceEEEEeCCCCCCcccccccccCceEEEEeecCCc
Q 045199 37 DFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKKVT 71 (82)
Q Consensus 37 ~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~k~ 71 (82)
.|...++|=++||++ -+-+....-+++++.|+.+
T Consensus 49 ~y~~~l~L~~~Idpe-S~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 49 RFEFSLELYGKIMTE-YRKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EEEEEEEBSSCEEEE-EEEEEESSSEEEEEEECCS
T ss_pred eEEEEeEhhhccccc-ceEEecCCEEEEEEEECCC
Confidence 589999999999999 6666678889999999654
No 33
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=41.89 E-value=12 Score=21.84 Aligned_cols=29 Identities=14% Similarity=0.043 Sum_probs=24.7
Q ss_pred EeCCCCCCcccccccc-cCceEEEEeecCC
Q 045199 42 FQLPGCLDDQQFNGDF-TDGIFIGVVKKKV 70 (82)
Q Consensus 42 F~lPgpVD~~~~sa~F-~DGILe~vVpK~k 70 (82)
-+||-.++.+.+..-| .-||.++.+++.+
T Consensus 21 ~nlp~~~t~~~l~~~F~~~Gi~~v~i~~~~ 50 (104)
T 1wi8_A 21 GNLPYDVTEESIKEFFRGLNISAVRLPREP 50 (104)
T ss_dssp ESCCSSCCHHHHHHHTTTSCEEEEECCBCS
T ss_pred eCCCCcCCHHHHHHHHHHCCceEEEEecCC
Confidence 3699999999999999 6689999998754
No 34
>2dng_A Eukaryotic translation initiation factor 4H; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=39.90 E-value=15 Score=21.34 Aligned_cols=29 Identities=14% Similarity=-0.051 Sum_probs=24.5
Q ss_pred EeCCCCCCcccccccc-cCceEEEEeecCC
Q 045199 42 FQLPGCLDDQQFNGDF-TDGIFIGVVKKKV 70 (82)
Q Consensus 42 F~lPgpVD~~~~sa~F-~DGILe~vVpK~k 70 (82)
-+||-.++.+.+..-| .=||.++.+++.+
T Consensus 21 ~nLp~~~t~~~l~~~F~~~gi~~v~i~~~~ 50 (103)
T 2dng_A 21 GNLPFNTVQGDIDAIFKDLSIRSVRLVRDK 50 (103)
T ss_dssp ESCCTTCCHHHHHHHTTTSCEEEEEEEECS
T ss_pred eCCCCCCCHHHHHHHHHhCCceEEEEeecC
Confidence 3799999999999888 4489999999754
No 35
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=38.60 E-value=27 Score=22.70 Aligned_cols=42 Identities=26% Similarity=0.336 Sum_probs=24.0
Q ss_pred CceEEEEeCCCCCCcccccccc---cCceEEEEee-c--CCcCceeee
Q 045199 36 GDFSITFQLPGCLDDQQFNGDF---TDGIFIGVVK-K--KVTRSIQLR 77 (82)
Q Consensus 36 G~FsrSF~lPgpVD~~~~sa~F---~DGILe~vVp-K--~k~rsI~i~ 77 (82)
|.|.++=-=|.|--..++.-.| .||||++... | .++.+|.|.
T Consensus 83 g~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~ 130 (135)
T 1q5l_A 83 GQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIK 130 (135)
T ss_dssp EEEECCCCCSCCSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEeCCCCCCCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEe
Confidence 5554432112333334677777 8999999885 3 444556654
No 36
>2j76_E EIF-4B, EIF4B, eukaryotic translation initiation factor 4B; protein biosynthesis, RNA recognition motif, RNA binding domain, RRM, RBD, RNP; NMR {Homo sapiens}
Probab=37.44 E-value=19 Score=20.95 Aligned_cols=29 Identities=14% Similarity=0.043 Sum_probs=24.8
Q ss_pred EeCCCCCCcccccccc-cCceEEEEeecCC
Q 045199 42 FQLPGCLDDQQFNGDF-TDGIFIGVVKKKV 70 (82)
Q Consensus 42 F~lPgpVD~~~~sa~F-~DGILe~vVpK~k 70 (82)
-+||..++.+.+..-| .=||.++.+++.+
T Consensus 25 ~nLp~~~t~~~l~~~F~~~Gi~~v~i~~~~ 54 (100)
T 2j76_E 25 GNLPYDVTEESIKEFFRGLNISAVRLPREP 54 (100)
T ss_dssp SCCSSCCSSSHHHHHSCSSCEEEEECSCCT
T ss_pred eCCCCCCCHHHHHHHHHhcCCeEEEEEecC
Confidence 4799999999999999 6689999988754
No 37
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=34.87 E-value=24 Score=22.65 Aligned_cols=31 Identities=19% Similarity=-0.021 Sum_probs=27.2
Q ss_pred EEEEeCCCCCCcccccccccCceEEEEeecC
Q 045199 39 SITFQLPGCLDDQQFNGDFTDGIFIGVVKKK 69 (82)
Q Consensus 39 srSF~lPgpVD~~~~sa~F~DGILe~vVpK~ 69 (82)
.+.-.|.++|+++.-+-+..+|-+++.+-|+
T Consensus 49 ~~~~~L~~~I~~e~S~w~i~~~kv~i~L~K~ 79 (131)
T 2o30_A 49 VIDGELLHEVDVSSLWWVINGDVVDVNVTKK 79 (131)
T ss_dssp EEEEEBSSCEEEEEEEEEEETTEEEEEEEES
T ss_pred eEccccccccccccCEEEEeCCEEEEEEEEC
Confidence 5677899999999988888888899999996
No 38
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=31.77 E-value=49 Score=24.96 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=28.2
Q ss_pred CCceEEEEeCCCCCCcccc-cccccCceEEEEeecC
Q 045199 35 PGDFSITFQLPGCLDDQQF-NGDFTDGIFIGVVKKK 69 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~-sa~F~DGILe~vVpK~ 69 (82)
.|.|.|.+.||...--..+ .|.|.||-|.|..-..
T Consensus 334 ~g~~rR~i~LP~~L~~~~v~~A~~~~~~L~i~~~~~ 369 (374)
T 3igf_A 334 AGDQRRNIFLPPALSGRPITGAKFQNNYLIISFLEH 369 (374)
T ss_dssp ETTEEEEEECCTTTTTCCEEEEEEETTEEEEEECCC
T ss_pred ECCEeecccCCHHHcCCCccccEEECCEEEEEEehh
Confidence 4899999999998776644 5778999999887553
No 39
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=28.65 E-value=58 Score=21.75 Aligned_cols=33 Identities=12% Similarity=-0.101 Sum_probs=27.7
Q ss_pred EEEEeCCCCCCcccccccccCce-EEEEeecCCc
Q 045199 39 SITFQLPGCLDDQQFNGDFTDGI-FIGVVKKKVT 71 (82)
Q Consensus 39 srSF~lPgpVD~~~~sa~F~DGI-Le~vVpK~k~ 71 (82)
-+.-.|.++|+++.-+-+..||- +++.+-|+.+
T Consensus 58 ~l~g~L~~~I~~eeS~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 58 ILKGKLFDSTIADEGTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp EEEEEBSSCBCGGGCEEEEECCCEEEEEEEBSSC
T ss_pred EEeeccccccCccccEEEEcCCcEEEEEEEEcCC
Confidence 36778999999999888888774 8999999764
No 40
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=28.63 E-value=20 Score=21.40 Aligned_cols=13 Identities=31% Similarity=0.590 Sum_probs=11.3
Q ss_pred eCCCCCCcccccc
Q 045199 43 QLPGCLDDQQFNG 55 (82)
Q Consensus 43 ~lPgpVD~~~~sa 55 (82)
.||..||++-|++
T Consensus 11 ~lP~~VD~eVF~~ 23 (48)
T 2kwv_A 11 ALPEGVDQEVFKQ 23 (48)
T ss_dssp SSCTTCCGGGTTT
T ss_pred cCCCCCCHHHHHH
Confidence 7899999998875
No 41
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=27.56 E-value=64 Score=21.24 Aligned_cols=43 Identities=23% Similarity=0.262 Sum_probs=24.0
Q ss_pred CCceEEEEeCCCCCCcccccccc---cCceEEEEeec---CCcCceeee
Q 045199 35 PGDFSITFQLPGCLDDQQFNGDF---TDGIFIGVVKK---KVTRSIQLR 77 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~sa~F---~DGILe~vVpK---~k~rsI~i~ 77 (82)
-|.|.++=--|.|-...++.-.| .||||+|...- .++.+|.|.
T Consensus 65 LG~f~l~gipp~p~G~~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~ 113 (152)
T 3h0x_A 65 LGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITIT 113 (152)
T ss_dssp EEEEEECCCCCCCTTCSCEEEEEEECTTSEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEEeCCCCCCCCCceEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEe
Confidence 35555542123333334566777 89999998753 344455553
No 42
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=27.52 E-value=75 Score=21.00 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=24.3
Q ss_pred CCceEEEEeCCCCCCcccccccc---cCceEEEEeec---CCcCceeee
Q 045199 35 PGDFSITFQLPGCLDDQQFNGDF---TDGIFIGVVKK---KVTRSIQLR 77 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~sa~F---~DGILe~vVpK---~k~rsI~i~ 77 (82)
-|.|.++=-=|.|--..++.-.| .||||+|...- .++.+|.|.
T Consensus 65 LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~ 113 (151)
T 3dqg_A 65 LGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQ 113 (151)
T ss_dssp EEEEEEECCCCCCTTCSCEEEEEEECTTSEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEEeCCCCCCCCCcEEEEEEEeccCcEEEEEEEEccCCCEeEEEEe
Confidence 46666552123333334566677 89999998753 334455543
No 43
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=25.45 E-value=70 Score=21.18 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=24.5
Q ss_pred CCceEEEEeCCCCCCcccccccc---cCceEEEEeec---CCcCceeee
Q 045199 35 PGDFSITFQLPGCLDDQQFNGDF---TDGIFIGVVKK---KVTRSIQLR 77 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~sa~F---~DGILe~vVpK---~k~rsI~i~ 77 (82)
-|.|.++=--|.|--..++.-.| .||||+|...- .++.+|.|.
T Consensus 65 LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~ 113 (152)
T 3dob_A 65 LGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQ 113 (152)
T ss_dssp EEEEEEECCCCCCTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEEC
T ss_pred eEEEEEeCCCCCCCCCceEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 45665552223333334566677 89999998753 344455553
No 44
>2doa_A RNA polymerase II elongation factor ELL; C19ORF17, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.81
Probab=24.45 E-value=21 Score=23.80 Aligned_cols=17 Identities=18% Similarity=0.411 Sum_probs=13.4
Q ss_pred hhhhhhhhhcccCCCCCc
Q 045199 20 RDQIRNLLDTRNLCPPGD 37 (82)
Q Consensus 20 ~sqvf~~M~~q~LCPpG~ 37 (82)
...|.+ +..|+|||||+
T Consensus 87 rq~v~r-~l~~~l~~p~s 103 (104)
T 2doa_A 87 QQLLKR-VLVRKLSGPSS 103 (104)
T ss_dssp HHHHHH-HHHHHSSCSSC
T ss_pred HHHHHH-HHHHhcCCCCC
Confidence 345677 89999999975
No 45
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=24.18 E-value=98 Score=18.85 Aligned_cols=36 Identities=17% Similarity=0.387 Sum_probs=19.9
Q ss_pred CCCCCceEEEEeCCCCCCccccccccc----------CceEEEEee
Q 045199 32 LCPPGDFSITFQLPGCLDDQQFNGDFT----------DGIFIGVVK 67 (82)
Q Consensus 32 LCPpG~FsrSF~lPgpVD~~~~sa~F~----------DGILe~vVp 67 (82)
.||++.-..+|..+..-..=.+.++|. +|+.++.|+
T Consensus 5 ~~~~~~~~v~F~wap~a~~V~v~GdFn~W~~~~m~~~~g~w~~~v~ 50 (96)
T 1z0n_A 5 KAPAQARPTVFRWTGGGKEVYLSGSFNNWSKLPMTRSQNNFVAILD 50 (96)
T ss_dssp -----CEEEEEEECSCCSCEEEEEGGGTTCCEECEEETTEEEEEEE
T ss_pred cCCCCceEEEEEECCCCcEEEEEEEeCCCccccCEECCCEEEEEEE
Confidence 477777777887776555545566663 366666664
No 46
>1wez_A HnRNP H', FTP-3, heterogeneous nuclear ribonucleoprotein H'; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.42 E-value=26 Score=20.86 Aligned_cols=30 Identities=10% Similarity=-0.072 Sum_probs=25.0
Q ss_pred EEeCCCCCCcccccccc-cCceEEEEeecCC
Q 045199 41 TFQLPGCLDDQQFNGDF-TDGIFIGVVKKKV 70 (82)
Q Consensus 41 SF~lPgpVD~~~~sa~F-~DGILe~vVpK~k 70 (82)
.=+||-.+..+.+..-| .=|+.++.+++.+
T Consensus 20 V~nLp~~~te~~l~~~F~~~G~~~v~i~~d~ 50 (102)
T 1wez_A 20 MRGLPYRATENDIYNFFSPLNPMRVHIEIGP 50 (102)
T ss_dssp EESCCTTCCHHHHHHSSCSCCCSEEEEEESS
T ss_pred EeCCCCCCCHHHHHHHHHHcCceEEEEEECC
Confidence 35899999999999999 6689899888743
No 47
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=22.87 E-value=80 Score=22.07 Aligned_cols=42 Identities=24% Similarity=0.275 Sum_probs=24.3
Q ss_pred CCceEEEEeCCCCCCcccccccc---cCceEEEEeec---CCcCceee
Q 045199 35 PGDFSITFQLPGCLDDQQFNGDF---TDGIFIGVVKK---KVTRSIQL 76 (82)
Q Consensus 35 pG~FsrSF~lPgpVD~~~~sa~F---~DGILe~vVpK---~k~rsI~i 76 (82)
-|.|.++=-=|.|-...++.-.| .||||+|...- .++.+|.|
T Consensus 66 Lg~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I 113 (219)
T 4e81_A 66 LGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITI 113 (219)
T ss_dssp EEEEEEECCCCCSTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEE
T ss_pred EEEEEEeCCCCCCCCCceEEEEEEeCCCCCEeeeeeccccCccceEee
Confidence 46666652223333334577777 89999997753 33444544
No 48
>1vmo_A Vitelline membrane outer layer protein I; membrane protein; 2.20A {Gallus gallus} SCOP: b.77.1.1
Probab=20.74 E-value=33 Score=23.94 Aligned_cols=21 Identities=29% Similarity=0.534 Sum_probs=15.3
Q ss_pred cccCCCCCceEEEEeCCCCCCccc
Q 045199 29 TRNLCPPGDFSITFQLPGCLDDQQ 52 (82)
Q Consensus 29 ~q~LCPpG~FsrSF~lPgpVD~~~ 52 (82)
....||.|.|. .|+| .|++.+
T Consensus 22 ~~~~CP~G~~~-Gf~l--kvE~~q 42 (163)
T 1vmo_A 22 IRQFCHSGYAN-GFAL--KVEPSQ 42 (163)
T ss_dssp CCEECSSSCEE-EEEE--EECCSC
T ss_pred CccCCCCcceE-EEEE--EecCCc
Confidence 35689999999 9998 344443
No 49
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=20.40 E-value=28 Score=22.27 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=18.9
Q ss_pred ccCCCCCceEEEEeCCCCCCcccccccccCceEEEEeecCCc
Q 045199 30 RNLCPPGDFSITFQLPGCLDDQQFNGDFTDGIFIGVVKKKVT 71 (82)
Q Consensus 30 q~LCPpG~FsrSF~lPgpVD~~~~sa~F~DGILe~vVpK~k~ 71 (82)
+..=|||+|.++ .|| ..=..|=|+++|--+--
T Consensus 40 ~~~VppGpF~I~-dl~---------~~~~~Gdl~V~v~eadG 71 (90)
T 3fcg_A 40 NELVPSGPFELA-NLP---------LGGGSGELKVIIHESDG 71 (90)
T ss_dssp EEEECSEEEEEC-CCC------------CCEEEEEEEECTTS
T ss_pred EeEeCCCCeEEc-CCc---------ccCCceeEEEEEEECCC
Confidence 355699999985 222 11135677777766443
No 50
>1nh2_C Transcription initiation factor IIA large chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: b.56.1.1 PDB: 1ytf_C*
Probab=20.29 E-value=33 Score=22.00 Aligned_cols=37 Identities=19% Similarity=0.477 Sum_probs=20.6
Q ss_pred CCCccccccceEEEehhhhhhhhhcccCCCCCceEEEEeCCCCCCcccccccccCceEEE
Q 045199 5 DGDEDDETTEILLKFRDQIRNLLDTRNLCPPGDFSITFQLPGCLDDQQFNGDFTDGIFIG 64 (82)
Q Consensus 5 dg~~d~ttge~~v~~~sqvf~~M~~q~LCPpG~FsrSF~lPgpVD~~~~sa~F~DGILe~ 64 (82)
++.+|..++-..++-+..|-+ -+. .-...|+|||+.+
T Consensus 26 ~~~~d~~~~n~vlC~ydKV~R-~Kn----------------------KWKc~LKdGi~~i 62 (79)
T 1nh2_C 26 EGEEDGPDENLMLCLYDKVTR-TKA----------------------RWKCSLKDGVVTI 62 (79)
T ss_dssp --------CCEEEEEEEEEEE-ETT----------------------EEEEEEEEEEEEE
T ss_pred ccccccccCcEEEEEEEEEee-ecc----------------------eEEEEEeeeEEEE
Confidence 445566667788888777777 322 3466789999876
Done!