Query 045201
Match_columns 66
No_of_seqs 100 out of 271
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 19:03:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ld4_A Anamorsin; methyltransf 96.2 0.0013 4.5E-08 40.8 1.0 59 3-62 89-175 (176)
2 3eey_A Putative rRNA methylase 95.7 0.017 6E-07 36.0 4.6 54 3-56 127-189 (197)
3 1jsx_A Glucose-inhibited divis 95.0 0.02 6.7E-07 35.9 3.1 51 3-55 153-205 (207)
4 3evz_A Methyltransferase; NYSG 94.4 0.081 2.8E-06 33.7 5.1 51 3-54 167-219 (230)
5 4dzr_A Protein-(glutamine-N5) 94.1 0.051 1.8E-06 33.6 3.6 51 2-55 151-205 (215)
6 2zfu_A Nucleomethylin, cerebra 93.9 0.074 2.5E-06 33.5 4.1 51 2-55 138-191 (215)
7 3mti_A RRNA methylase; SAM-dep 93.3 0.12 4.1E-06 31.8 4.2 52 3-54 123-183 (185)
8 3tr6_A O-methyltransferase; ce 92.8 0.16 5.6E-06 32.1 4.4 47 3-55 162-224 (225)
9 3e8s_A Putative SAM dependent 92.0 0.2 7E-06 31.0 4.0 52 3-54 140-226 (227)
10 3r3h_A O-methyltransferase, SA 91.9 0.25 8.5E-06 32.7 4.6 47 3-55 158-220 (242)
11 2plw_A Ribosomal RNA methyltra 91.6 0.11 3.8E-06 32.2 2.4 51 3-54 142-195 (201)
12 3duw_A OMT, O-methyltransferas 91.5 0.32 1.1E-05 30.7 4.6 52 3-55 155-222 (223)
13 3ntv_A MW1564 protein; rossman 91.3 0.36 1.2E-05 31.3 4.7 47 3-55 164-231 (232)
14 2b3t_A Protein methyltransfera 91.0 0.091 3.1E-06 34.9 1.7 49 3-54 226-275 (276)
15 2nyu_A Putative ribosomal RNA 90.9 0.12 4.2E-06 31.8 2.1 13 3-15 133-145 (196)
16 2i62_A Nicotinamide N-methyltr 90.7 0.16 5.5E-06 32.5 2.6 33 3-35 186-234 (265)
17 3tfw_A Putative O-methyltransf 90.5 0.89 3.1E-05 29.8 6.2 52 3-55 158-225 (248)
18 1ej0_A FTSJ; methyltransferase 90.1 0.13 4.4E-06 30.3 1.6 52 3-55 124-178 (180)
19 3ocj_A Putative exported prote 89.8 0.26 8.9E-06 33.1 3.2 51 3-55 215-304 (305)
20 1xdz_A Methyltransferase GIDB; 89.5 0.94 3.2E-05 29.3 5.6 58 2-59 161-223 (240)
21 1y8c_A S-adenosylmethionine-de 89.4 0.44 1.5E-05 29.9 3.9 37 19-55 204-245 (246)
22 2fca_A TRNA (guanine-N(7)-)-me 89.3 0.36 1.2E-05 31.0 3.4 32 3-34 141-173 (213)
23 3dr5_A Putative O-methyltransf 89.2 0.45 1.5E-05 31.1 3.9 48 3-56 151-214 (221)
24 3e05_A Precorrin-6Y C5,15-meth 89.2 0.5 1.7E-05 29.5 3.9 33 3-35 130-163 (204)
25 2hnk_A SAM-dependent O-methylt 89.1 0.57 2E-05 30.2 4.3 48 3-56 169-232 (239)
26 3cbg_A O-methyltransferase; cy 89.1 0.67 2.3E-05 30.0 4.6 47 3-55 170-232 (232)
27 3dh0_A SAM dependent methyltra 88.8 0.26 8.9E-06 30.8 2.4 49 3-55 131-193 (219)
28 3h2b_A SAM-dependent methyltra 88.8 0.36 1.2E-05 29.9 3.0 50 3-54 129-194 (203)
29 2xyq_A Putative 2'-O-methyl tr 88.7 0.16 5.6E-06 35.6 1.5 50 3-54 159-210 (290)
30 3opn_A Putative hemolysin; str 88.4 0.85 2.9E-05 30.2 4.9 54 2-55 124-202 (232)
31 3hnr_A Probable methyltransfer 88.4 0.76 2.6E-05 28.6 4.4 49 2-54 132-211 (220)
32 2avd_A Catechol-O-methyltransf 88.3 0.76 2.6E-05 29.0 4.4 47 3-55 167-229 (229)
33 2xvm_A Tellurite resistance pr 88.1 0.22 7.4E-06 30.5 1.6 33 2-36 123-169 (199)
34 1yzh_A TRNA (guanine-N(7)-)-me 87.7 0.57 2E-05 29.6 3.5 33 3-35 144-177 (214)
35 3dlc_A Putative S-adenosyl-L-m 87.7 0.32 1.1E-05 29.9 2.3 13 3-15 136-148 (219)
36 3cgg_A SAM-dependent methyltra 87.3 0.53 1.8E-05 28.3 3.1 34 3-36 135-171 (195)
37 3dou_A Ribosomal RNA large sub 87.3 0.55 1.9E-05 30.0 3.3 51 3-55 127-181 (191)
38 3jwg_A HEN1, methyltransferase 87.2 1.4 4.7E-05 27.6 5.1 53 3-55 129-210 (219)
39 3lpm_A Putative methyltransfer 87.2 0.84 2.9E-05 29.9 4.2 33 3-35 164-196 (259)
40 1l3i_A Precorrin-6Y methyltran 86.7 0.42 1.4E-05 28.7 2.4 33 3-35 122-155 (192)
41 1nt2_A Fibrillarin-like PRE-rR 86.6 1.1 3.9E-05 28.8 4.6 13 2-14 148-160 (210)
42 3c3y_A Pfomt, O-methyltransfer 86.6 0.99 3.4E-05 29.4 4.3 13 3-15 169-181 (237)
43 1fbn_A MJ fibrillarin homologu 86.4 0.46 1.6E-05 30.5 2.6 51 3-55 166-228 (230)
44 1sui_A Caffeoyl-COA O-methyltr 86.0 1.3 4.4E-05 29.3 4.6 13 3-15 178-190 (247)
45 3c3p_A Methyltransferase; NP_9 85.8 0.76 2.6E-05 28.8 3.3 13 3-15 148-160 (210)
46 3pfg_A N-methyltransferase; N, 85.8 0.44 1.5E-05 30.8 2.2 33 20-55 217-249 (263)
47 1dus_A MJ0882; hypothetical pr 85.0 0.29 9.9E-06 29.5 1.0 48 3-54 145-193 (194)
48 3hp7_A Hemolysin, putative; st 84.4 2.2 7.5E-05 29.9 5.5 53 2-54 172-249 (291)
49 2oxt_A Nucleoside-2'-O-methylt 84.4 0.42 1.4E-05 32.6 1.7 52 2-54 170-227 (265)
50 3ckk_A TRNA (guanine-N(7)-)-me 84.0 0.43 1.5E-05 31.6 1.6 29 3-31 156-185 (235)
51 2pxx_A Uncharacterized protein 83.9 0.8 2.7E-05 28.1 2.7 49 3-54 147-197 (215)
52 1iy9_A Spermidine synthase; ro 83.2 2.4 8.3E-05 28.6 5.1 54 3-56 177-237 (275)
53 1g8a_A Fibrillarin-like PRE-rR 83.2 1.5 5.2E-05 27.7 3.9 49 3-55 166-227 (227)
54 3sso_A Methyltransferase; macr 83.1 0.22 7.7E-06 37.3 -0.1 33 3-35 312-362 (419)
55 3bxo_A N,N-dimethyltransferase 82.6 0.76 2.6E-05 28.8 2.3 33 20-55 207-239 (239)
56 2frn_A Hypothetical protein PH 82.6 0.36 1.2E-05 32.5 0.8 34 3-36 213-253 (278)
57 1mjf_A Spermidine synthase; sp 82.0 2.1 7.3E-05 28.8 4.5 53 3-55 181-239 (281)
58 2ipx_A RRNA 2'-O-methyltransfe 81.6 2.7 9.4E-05 26.7 4.7 51 3-54 170-231 (233)
59 3njr_A Precorrin-6Y methylase; 81.3 1.1 3.8E-05 28.6 2.7 33 3-35 142-175 (204)
60 3dxy_A TRNA (guanine-N(7)-)-me 81.2 0.64 2.2E-05 30.3 1.6 27 3-29 138-165 (218)
61 3fpf_A Mtnas, putative unchara 81.0 0.87 3E-05 32.4 2.3 50 3-55 210-264 (298)
62 3id6_C Fibrillarin-like rRNA/T 81.0 0.8 2.7E-05 30.9 2.0 52 3-56 169-232 (232)
63 3sm3_A SAM-dependent methyltra 80.9 1.3 4.5E-05 27.5 2.9 13 3-15 129-141 (235)
64 3hm2_A Precorrin-6Y C5,15-meth 80.7 1.9 6.5E-05 25.7 3.5 32 3-34 115-147 (178)
65 1inl_A Spermidine synthase; be 80.4 1.8 6E-05 29.6 3.6 54 3-56 193-253 (296)
66 2a14_A Indolethylamine N-methy 80.3 0.35 1.2E-05 31.9 0.1 32 3-34 185-232 (263)
67 4gek_A TRNA (CMO5U34)-methyltr 80.2 0.32 1.1E-05 32.8 -0.1 14 3-16 166-179 (261)
68 3orh_A Guanidinoacetate N-meth 80.0 0.3 1E-05 32.0 -0.4 13 3-15 158-170 (236)
69 3i9f_A Putative type 11 methyl 79.9 2.7 9.2E-05 25.1 4.0 48 3-55 100-160 (170)
70 3grz_A L11 mtase, ribosomal pr 79.7 2.4 8.1E-05 26.3 3.8 36 2-37 146-182 (205)
71 2nxc_A L11 mtase, ribosomal pr 79.0 1.7 5.8E-05 28.7 3.1 35 3-37 206-241 (254)
72 2bm8_A Cephalosporin hydroxyla 78.8 1.4 4.6E-05 29.0 2.6 31 4-34 176-213 (236)
73 3g89_A Ribosomal RNA small sub 78.2 1.6 5.3E-05 29.0 2.8 58 2-59 171-233 (249)
74 3bwc_A Spermidine synthase; SA 77.9 2.1 7.1E-05 29.3 3.4 53 3-55 198-258 (304)
75 1pjz_A Thiopurine S-methyltran 77.8 3.3 0.00011 26.1 4.1 35 2-37 127-173 (203)
76 1qzz_A RDMB, aclacinomycin-10- 77.3 3.2 0.00011 28.2 4.2 52 3-55 275-356 (374)
77 1nkv_A Hypothetical protein YJ 77.3 0.52 1.8E-05 30.1 0.2 14 2-15 127-140 (256)
78 3tma_A Methyltransferase; thum 77.1 5.6 0.00019 27.3 5.4 48 3-54 305-353 (354)
79 4hg2_A Methyltransferase type 76.9 0.42 1.4E-05 32.3 -0.4 13 2-14 122-134 (257)
80 1nv8_A HEMK protein; class I a 76.6 3.3 0.00011 28.0 4.1 46 3-55 237-282 (284)
81 3dtn_A Putative methyltransfer 76.0 0.51 1.8E-05 29.8 -0.1 13 3-15 136-148 (234)
82 1vl5_A Unknown conserved prote 75.8 0.52 1.8E-05 30.4 -0.1 14 2-15 127-140 (260)
83 2g72_A Phenylethanolamine N-me 75.3 0.54 1.8E-05 31.1 -0.2 32 3-34 203-250 (289)
84 2vdv_E TRNA (guanine-N(7)-)-me 75.3 1.2 4.1E-05 28.9 1.5 31 2-32 160-191 (246)
85 3hem_A Cyclopropane-fatty-acyl 74.9 1.1 3.9E-05 29.7 1.4 15 2-16 170-184 (302)
86 3ggd_A SAM-dependent methyltra 74.9 1 3.4E-05 28.7 1.1 13 3-15 151-163 (245)
87 3lcc_A Putative methyl chlorid 74.9 3.7 0.00013 25.9 3.7 33 3-35 159-202 (235)
88 3f4k_A Putative methyltransfer 74.8 0.64 2.2E-05 29.7 0.1 34 2-35 137-191 (257)
89 1kpg_A CFA synthase;, cyclopro 74.3 1.1 3.8E-05 29.3 1.2 14 2-15 155-168 (287)
90 2p7i_A Hypothetical protein; p 74.2 0.67 2.3E-05 28.9 0.1 13 3-15 129-141 (250)
91 3u81_A Catechol O-methyltransf 73.9 1.1 3.6E-05 28.6 1.0 50 3-55 158-213 (221)
92 3ujc_A Phosphoethanolamine N-m 73.8 0.63 2.2E-05 29.6 -0.1 14 2-15 146-159 (266)
93 2yvl_A TRMI protein, hypotheti 73.3 3.3 0.00011 26.1 3.2 30 3-33 178-208 (248)
94 1uir_A Polyamine aminopropyltr 72.9 2.5 8.5E-05 29.1 2.7 54 3-56 183-243 (314)
95 3q87_B N6 adenine specific DNA 72.6 5.4 0.00018 24.4 4.0 46 7-54 115-161 (170)
96 3p2e_A 16S rRNA methylase; met 72.0 0.73 2.5E-05 30.2 -0.2 11 3-13 127-137 (225)
97 2cmg_A Spermidine synthase; tr 71.9 9.6 0.00033 25.6 5.5 53 3-56 159-217 (262)
98 2aot_A HMT, histamine N-methyl 71.5 0.72 2.5E-05 30.7 -0.3 13 2-14 159-171 (292)
99 1xtp_A LMAJ004091AAA; SGPP, st 71.4 0.77 2.6E-05 29.2 -0.1 34 2-35 184-233 (254)
100 3dli_A Methyltransferase; PSI- 71.2 1.1 3.9E-05 28.5 0.7 14 2-15 127-140 (240)
101 2kw5_A SLR1183 protein; struct 71.2 1.5 5E-05 27.0 1.1 32 2-35 118-166 (202)
102 3adn_A Spermidine synthase; am 71.1 2.8 9.5E-05 28.9 2.6 54 3-56 186-246 (294)
103 3kkz_A Uncharacterized protein 71.0 0.94 3.2E-05 29.4 0.2 33 2-34 137-190 (267)
104 2ozv_A Hypothetical protein AT 70.8 8.6 0.0003 25.3 5.0 31 3-34 158-188 (260)
105 2o57_A Putative sarcosine dime 70.7 0.82 2.8E-05 30.1 -0.1 14 2-15 174-187 (297)
106 3mgg_A Methyltransferase; NYSG 70.5 0.83 2.8E-05 29.6 -0.1 14 2-15 129-142 (276)
107 2p8j_A S-adenosylmethionine-de 70.5 0.83 2.9E-05 28.1 -0.1 14 3-16 116-129 (209)
108 2ex4_A Adrenal gland protein A 70.3 0.85 2.9E-05 29.2 -0.1 33 3-35 173-220 (241)
109 2gpy_A O-methyltransferase; st 70.3 4 0.00014 25.9 3.1 13 3-15 148-160 (233)
110 3lst_A CALO1 methyltransferase 69.5 1.7 5.8E-05 29.8 1.3 33 3-35 274-331 (348)
111 3bus_A REBM, methyltransferase 69.3 1 3.5E-05 29.1 0.1 13 3-15 154-166 (273)
112 2o07_A Spermidine synthase; st 69.2 4.6 0.00016 27.7 3.5 53 3-55 197-256 (304)
113 1xxl_A YCGJ protein; structura 69.1 0.93 3.2E-05 29.1 -0.1 14 2-15 111-124 (239)
114 2pt6_A Spermidine synthase; tr 69.0 7.7 0.00026 26.8 4.6 54 3-56 218-278 (321)
115 2fk8_A Methoxy mycolic acid sy 68.6 1.8 6E-05 28.9 1.2 14 2-15 181-194 (318)
116 1zx0_A Guanidinoacetate N-meth 68.4 0.87 3E-05 29.2 -0.4 16 2-17 157-172 (236)
117 2y9k_A Protein INVG; protein t 68.0 4.1 0.00014 25.2 2.7 25 6-30 109-133 (137)
118 2wa2_A Non-structural protein 68.0 2.3 7.9E-05 29.1 1.7 52 2-54 178-235 (276)
119 3ou2_A SAM-dependent methyltra 67.9 1 3.5E-05 27.8 -0.1 14 3-16 134-147 (218)
120 2r3s_A Uncharacterized protein 67.5 4.8 0.00016 26.8 3.1 50 3-55 259-335 (335)
121 2pwy_A TRNA (adenine-N(1)-)-me 66.8 3 0.0001 26.5 1.9 31 3-33 186-217 (258)
122 3p9n_A Possible methyltransfer 66.2 2.4 8.1E-05 26.1 1.3 15 3-17 141-155 (189)
123 3gu3_A Methyltransferase; alph 66.1 1.2 4.2E-05 29.4 -0.0 15 3-17 114-128 (284)
124 1g60_A Adenine-specific methyl 66.0 8.9 0.0003 25.4 4.3 53 2-55 61-125 (260)
125 2yxd_A Probable cobalt-precorr 65.9 12 0.00039 22.0 4.4 31 7-37 123-154 (183)
126 3mq2_A 16S rRNA methyltransfer 65.8 1.1 3.8E-05 28.1 -0.3 34 2-35 127-179 (218)
127 3i53_A O-methyltransferase; CO 65.6 2.1 7.1E-05 28.9 1.1 48 3-54 262-331 (332)
128 2gs9_A Hypothetical protein TT 65.4 1.2 4.2E-05 27.6 -0.1 14 2-15 119-132 (211)
129 3e23_A Uncharacterized protein 65.3 1.1 3.7E-05 27.9 -0.4 33 3-35 129-177 (211)
130 2fhp_A Methylase, putative; al 65.2 1.3 4.5E-05 26.7 -0.0 16 2-17 141-156 (187)
131 2b2c_A Spermidine synthase; be 65.1 7 0.00024 27.1 3.7 53 3-55 210-269 (314)
132 4htf_A S-adenosylmethionine-de 65.0 1.3 4.5E-05 29.0 -0.0 15 2-16 160-174 (285)
133 2i7c_A Spermidine synthase; tr 64.9 12 0.00041 25.1 4.8 53 3-55 180-239 (283)
134 1tw3_A COMT, carminomycin 4-O- 64.3 4.4 0.00015 27.5 2.5 53 3-55 276-356 (360)
135 3g07_A 7SK snRNA methylphospha 64.3 1.3 4.6E-05 29.6 -0.1 13 3-15 208-220 (292)
136 3l8d_A Methyltransferase; stru 64.3 1.3 4.5E-05 27.8 -0.1 33 2-34 140-194 (242)
137 2vdw_A Vaccinia virus capping 64.2 1.2 4.1E-05 30.6 -0.4 14 3-16 157-170 (302)
138 3ofk_A Nodulation protein S; N 64.2 1.2 4.2E-05 27.7 -0.3 14 2-15 141-154 (216)
139 2qe6_A Uncharacterized protein 64.2 2.4 8.2E-05 28.5 1.2 15 3-17 184-198 (274)
140 3ccf_A Cyclopropane-fatty-acyl 64.1 1.2 4.1E-05 29.2 -0.4 13 3-15 142-154 (279)
141 2p35_A Trans-aconitate 2-methy 64.0 1.4 4.9E-05 28.0 -0.0 14 2-15 119-132 (259)
142 2yqz_A Hypothetical protein TT 63.9 1.2 4.1E-05 28.3 -0.4 13 2-14 128-140 (263)
143 3g5l_A Putative S-adenosylmeth 63.8 1.2 4.2E-05 28.5 -0.4 13 3-15 133-145 (253)
144 2ift_A Putative methylase HI07 63.8 1.4 4.9E-05 27.8 -0.0 17 3-19 151-167 (201)
145 3thr_A Glycine N-methyltransfe 63.6 1.3 4.4E-05 29.0 -0.3 13 3-15 163-175 (293)
146 1ri5_A MRNA capping enzyme; me 63.5 1.3 4.5E-05 28.7 -0.3 15 2-16 161-175 (298)
147 1mil_A SHC adaptor protein; SH 63.4 3.2 0.00011 24.2 1.5 28 3-33 21-48 (104)
148 4fsd_A Arsenic methyltransfera 63.1 1.4 4.9E-05 30.8 -0.1 31 3-33 191-244 (383)
149 1p91_A Ribosomal RNA large sub 63.1 1.3 4.4E-05 28.7 -0.4 15 2-16 165-179 (269)
150 1yb2_A Hypothetical protein TA 63.0 3.3 0.00011 27.3 1.7 32 3-34 199-231 (275)
151 1ws6_A Methyltransferase; stru 62.7 1.6 5.3E-05 25.9 -0.0 15 3-17 135-149 (171)
152 3reo_A (ISO)eugenol O-methyltr 62.1 2.7 9.4E-05 29.2 1.2 14 3-16 288-301 (368)
153 3dp7_A SAM-dependent methyltra 62.0 2.8 9.5E-05 29.0 1.2 13 3-15 275-287 (363)
154 3jwh_A HEN1; methyltransferase 62.0 3.4 0.00012 25.8 1.5 16 3-18 129-144 (217)
155 3bkw_A MLL3908 protein, S-aden 61.9 1.4 4.7E-05 27.7 -0.4 13 3-15 132-144 (243)
156 2kk6_A Proto-oncogene tyrosine 61.5 2.9 9.8E-05 25.3 1.1 28 3-33 31-58 (116)
157 3vc1_A Geranyl diphosphate 2-C 60.8 1.7 5.7E-05 29.1 -0.1 14 2-15 208-221 (312)
158 2y3m_A Emhofq, protein transpo 60.8 5.3 0.00018 25.1 2.3 24 8-31 144-167 (175)
159 1ve3_A Hypothetical protein PH 60.6 1.7 5.8E-05 27.0 -0.1 15 3-17 130-144 (227)
160 3g5t_A Trans-aconitate 3-methy 60.3 1.5 5.3E-05 29.0 -0.4 12 2-13 136-147 (299)
161 1o54_A SAM-dependent O-methylt 60.3 4.2 0.00014 26.7 1.8 31 3-33 201-232 (277)
162 3d2l_A SAM-dependent methyltra 60.1 1.6 5.3E-05 27.5 -0.4 11 3-13 125-135 (243)
163 3p9c_A Caffeic acid O-methyltr 59.9 3.2 0.00011 28.9 1.2 14 3-16 286-299 (364)
164 1x19_A CRTF-related protein; m 59.8 3.5 0.00012 28.2 1.4 13 3-15 283-295 (359)
165 3cc8_A Putative methyltransfer 59.8 2 6.9E-05 26.4 0.1 14 2-15 117-130 (230)
166 1wqu_A C-FES, proto-oncogene t 59.7 4 0.00014 24.3 1.5 27 3-33 30-56 (114)
167 2b25_A Hypothetical protein; s 59.7 5.6 0.00019 27.0 2.4 15 2-16 206-220 (336)
168 3g2m_A PCZA361.24; SAM-depende 59.6 1.6 5.5E-05 28.9 -0.4 13 3-15 178-190 (299)
169 1gxi_E Photosystem I reaction 59.5 2.3 7.9E-05 25.2 0.3 8 3-10 9-16 (73)
170 2fpo_A Methylase YHHF; structu 59.3 1.9 6.6E-05 27.2 -0.0 16 3-18 148-163 (202)
171 3gr5_A ESCC; secretin, type II 59.2 6.1 0.00021 25.2 2.4 25 6-30 125-149 (156)
172 1xj5_A Spermidine synthase 1; 59.2 11 0.00036 26.5 3.8 12 3-14 223-234 (334)
173 2ip2_A Probable phenazine-spec 59.1 3.4 0.00011 27.8 1.2 48 3-54 260-333 (334)
174 1jb0_E Photosystem 1 reaction 59.0 2.4 8.1E-05 25.3 0.3 14 3-16 8-28 (75)
175 3mb5_A SAM-dependent methyltra 58.7 3.6 0.00012 26.3 1.2 29 3-31 182-211 (255)
176 1o9g_A RRNA methyltransferase; 57.6 3.3 0.00011 26.7 0.9 15 3-17 202-216 (250)
177 3gwz_A MMCR; methyltransferase 57.3 4.1 0.00014 28.2 1.4 49 3-54 295-368 (369)
178 2esr_A Methyltransferase; stru 57.0 2.2 7.6E-05 25.7 -0.0 16 3-18 126-141 (177)
179 1vlm_A SAM-dependent methyltra 56.4 2.2 7.5E-05 26.8 -0.1 32 3-34 127-182 (219)
180 2avn_A Ubiquinone/menaquinone 56.3 2 6.8E-05 27.9 -0.4 15 2-16 139-153 (260)
181 1fp1_D Isoliquiritigenin 2'-O- 55.5 2.3 8E-05 29.3 -0.1 13 3-15 294-306 (372)
182 3lbf_A Protein-L-isoaspartate 55.3 2.2 7.5E-05 26.4 -0.3 14 3-16 162-175 (210)
183 2yxe_A Protein-L-isoaspartate 53.2 2.5 8.5E-05 26.3 -0.3 15 3-17 165-179 (215)
184 2gb4_A Thiopurine S-methyltran 52.9 2.6 8.7E-05 28.2 -0.3 34 2-36 178-223 (252)
185 3bgv_A MRNA CAP guanine-N7 met 52.8 2.7 9.2E-05 28.1 -0.2 14 3-16 143-156 (313)
186 3mcz_A O-methyltransferase; ad 52.5 2.9 0.0001 28.3 -0.0 48 3-55 275-349 (352)
187 1wzn_A SAM-dependent methyltra 52.1 2.5 8.7E-05 26.8 -0.4 12 3-14 133-144 (252)
188 2p41_A Type II methyltransfera 52.0 4.6 0.00016 27.9 0.9 12 3-14 179-190 (305)
189 1vbf_A 231AA long hypothetical 51.7 2.7 9.3E-05 26.4 -0.3 14 3-16 153-166 (231)
190 1i1n_A Protein-L-isoaspartate 50.8 2.9 9.8E-05 26.3 -0.3 12 3-14 170-181 (226)
191 3m33_A Uncharacterized protein 50.1 2.9 9.8E-05 26.6 -0.3 32 2-33 129-160 (226)
192 2igt_A SAM dependent methyltra 50.1 16 0.00056 25.3 3.5 33 3-35 260-299 (332)
193 4df3_A Fibrillarin-like rRNA/T 48.4 19 0.00064 24.3 3.5 13 3-15 170-182 (233)
194 3oss_D Type 2 secretion system 48.0 9.4 0.00032 24.9 1.9 25 6-30 154-178 (181)
195 3m70_A Tellurite resistance pr 46.9 3.6 0.00012 26.8 -0.3 33 2-36 210-256 (286)
196 1jg1_A PIMT;, protein-L-isoasp 45.8 3.8 0.00013 26.1 -0.3 14 3-16 177-190 (235)
197 2b78_A Hypothetical protein SM 45.8 45 0.0015 23.4 5.3 31 3-33 319-355 (385)
198 1r18_A Protein-L-isoaspartate( 45.7 3.8 0.00013 25.9 -0.3 13 3-15 182-194 (227)
199 3eaz_A Tyrosine-protein kinase 45.6 8.5 0.00029 22.2 1.3 28 3-33 22-51 (106)
200 3us4_A Megakaryocyte-associate 44.8 7.5 0.00026 22.1 0.9 16 3-18 19-36 (98)
201 1i9g_A Hypothetical protein RV 44.4 9.7 0.00033 24.6 1.5 30 3-32 191-222 (280)
202 3k6r_A Putative transferase PH 43.9 11 0.00036 26.1 1.8 35 3-37 213-254 (278)
203 4e2x_A TCAB9; kijanose, tetron 43.3 4.2 0.00014 28.2 -0.4 34 2-35 195-248 (416)
204 2pbf_A Protein-L-isoaspartate 42.6 4.3 0.00015 25.4 -0.4 14 3-16 181-194 (227)
205 2pjd_A Ribosomal RNA small sub 40.8 5.7 0.0002 27.2 -0.0 14 2-15 290-303 (343)
206 1d4t_A T cell signal transduct 40.6 9.1 0.00031 22.0 0.9 28 3-33 18-48 (104)
207 3a27_A TYW2, uncharacterized p 40.5 14 0.0005 24.4 2.0 33 3-35 207-246 (272)
208 2eo3_A CRK-like protein; phosp 40.5 9 0.00031 22.5 0.8 28 3-33 33-62 (111)
209 4a6d_A Hydroxyindole O-methylt 40.2 10 0.00034 26.2 1.2 50 3-56 271-347 (353)
210 3q7e_A Protein arginine N-meth 40.0 3.1 0.00011 28.8 -1.5 11 2-12 160-170 (349)
211 4e9j_A General secretion pathw 38.9 15 0.0005 24.5 1.8 23 8-30 148-170 (246)
212 1ixk_A Methyltransferase; open 38.7 8.4 0.00029 26.3 0.6 12 3-14 234-245 (315)
213 3uwp_A Histone-lysine N-methyl 38.5 11 0.00036 28.5 1.1 15 2-16 275-289 (438)
214 2ekx_A Cytoplasmic tyrosine-pr 37.7 11 0.00036 22.0 0.9 15 3-17 25-42 (110)
215 1af7_A Chemotaxis receptor met 37.7 6.9 0.00023 26.8 -0.0 15 2-16 239-253 (274)
216 3eod_A Protein HNR; response r 37.3 48 0.0016 18.1 3.6 36 2-37 2-37 (130)
217 3ezj_A General secretion pathw 36.9 17 0.0006 23.9 1.9 24 7-30 143-166 (241)
218 1qp2_A Protein (PSAE protein); 36.4 8.9 0.00031 22.4 0.3 6 3-8 9-14 (70)
219 2f8l_A Hypothetical protein LM 35.9 17 0.00057 24.8 1.7 53 3-55 244-305 (344)
220 3giw_A Protein of unknown func 35.6 14 0.00049 25.8 1.4 13 3-15 188-200 (277)
221 1fp2_A Isoflavone O-methyltran 35.3 12 0.00041 25.4 0.9 13 3-15 273-288 (352)
222 2wk1_A NOVP; transferase, O-me 35.0 18 0.0006 25.2 1.7 36 3-38 232-270 (282)
223 3r0q_C Probable protein argini 34.9 3.3 0.00011 29.1 -2.0 13 2-14 156-168 (376)
224 2ih2_A Modification methylase 34.5 30 0.001 23.7 2.8 51 3-54 152-210 (421)
225 2ge9_A Tyrosine-protein kinase 34.4 13 0.00044 22.4 0.9 14 3-16 25-41 (125)
226 3ajd_A Putative methyltransfer 33.4 7.5 0.00026 25.8 -0.4 12 3-14 199-210 (274)
227 3i42_A Response regulator rece 33.0 56 0.0019 17.7 3.4 28 10-37 6-33 (127)
228 2wsc_E PSAE, PSI-E A, photosys 32.7 9.6 0.00033 24.9 0.1 8 3-10 88-95 (143)
229 1dl5_A Protein-L-isoaspartate 31.9 8.2 0.00028 26.1 -0.4 15 3-17 163-177 (317)
230 1u2z_A Histone-lysine N-methyl 31.7 15 0.0005 27.1 0.9 13 3-15 347-359 (433)
231 2fyt_A Protein arginine N-meth 31.5 5.2 0.00018 27.7 -1.5 11 2-12 158-168 (340)
232 1ev7_A Type IIE restriction en 31.3 14 0.00049 27.0 0.8 50 4-59 240-298 (317)
233 2cia_A Cytoplasmic protein NCK 31.1 16 0.00054 21.0 0.9 28 3-33 19-49 (102)
234 1lkk_A Human P56 tyrosine kina 30.4 16 0.00056 20.8 0.8 23 7-32 26-48 (105)
235 1ka6_A SH2 domain protein 1A; 30.2 14 0.00048 22.3 0.5 28 3-33 18-48 (128)
236 1h9o_A Phosphatidylinositol 3- 30.1 20 0.00068 21.0 1.2 27 3-33 24-52 (112)
237 2pln_A HP1043, response regula 29.6 69 0.0024 17.6 3.5 28 10-37 21-48 (137)
238 2zig_A TTHA0409, putative modi 29.6 9.5 0.00033 25.7 -0.4 12 3-14 85-96 (297)
239 3kto_A Response regulator rece 29.3 77 0.0026 17.5 4.0 29 9-37 8-36 (136)
240 1g6q_1 HnRNP arginine N-methyl 29.2 6 0.0002 27.1 -1.5 11 2-12 132-142 (328)
241 4dcm_A Ribosomal RNA large sub 29.1 9.9 0.00034 26.9 -0.4 26 3-28 322-349 (375)
242 2hdv_A SH2-B PH domain contain 28.8 17 0.00057 21.3 0.7 24 7-33 32-55 (111)
243 3snk_A Response regulator CHEY 28.7 71 0.0024 17.6 3.4 30 10-39 17-47 (135)
244 3hv2_A Response regulator/HD d 28.6 84 0.0029 17.7 4.0 29 9-37 16-44 (153)
245 2kno_A Tensin-like C1 domain-c 28.3 20 0.00067 21.8 1.0 15 4-18 35-51 (131)
246 2qr3_A Two-component system re 27.8 80 0.0027 17.2 4.1 29 9-37 5-33 (140)
247 2qm3_A Predicted methyltransfe 27.2 51 0.0017 22.8 3.0 32 3-34 265-303 (373)
248 3f6p_A Transcriptional regulat 27.0 82 0.0028 17.1 3.5 28 10-37 5-32 (120)
249 3grc_A Sensor protein, kinase; 26.9 85 0.0029 17.2 3.5 29 9-37 8-36 (140)
250 2pl1_A Transcriptional regulat 26.6 79 0.0027 16.8 3.3 28 10-37 3-30 (121)
251 3lte_A Response regulator; str 26.5 77 0.0026 17.2 3.3 29 9-37 8-36 (132)
252 3dmg_A Probable ribosomal RNA 26.5 12 0.0004 26.7 -0.4 14 3-16 328-341 (381)
253 4av2_A PILQ, type IV pilus bio 26.4 27 0.00094 27.3 1.7 23 8-30 463-485 (745)
254 3gjy_A Spermidine synthase; AP 26.3 12 0.00041 26.5 -0.4 54 3-57 188-249 (317)
255 3gdh_A Trimethylguanosine synt 26.1 4.3 0.00015 25.7 -2.5 14 2-15 168-181 (241)
256 3pqz_A Growth factor receptor- 25.7 35 0.0012 19.8 1.7 13 6-18 35-47 (117)
257 1zg3_A Isoflavanone 4'-O-methy 25.5 20 0.00068 24.4 0.7 13 3-15 278-293 (358)
258 3hdv_A Response regulator; PSI 25.4 84 0.0029 17.2 3.3 29 9-37 9-37 (136)
259 3bkx_A SAM-dependent methyltra 25.4 26 0.0009 22.3 1.2 13 3-15 147-159 (275)
260 3o4f_A Spermidine synthase; am 25.4 1.4E+02 0.0047 20.9 5.0 52 3-55 186-245 (294)
261 2hmh_A Suppressor of cytokine 25.4 22 0.00077 22.2 0.9 15 4-18 49-65 (152)
262 3c0k_A UPF0064 protein YCCW; P 24.9 29 0.00098 24.2 1.4 32 3-34 327-364 (396)
263 3cvo_A Methyltransferase-like 24.8 18 0.0006 24.0 0.3 13 3-15 142-154 (202)
264 2y1w_A Histone-arginine methyl 24.5 11 0.00037 26.0 -0.8 13 2-14 142-154 (348)
265 2h00_A Methyltransferase 10 do 24.3 5.1 0.00017 25.7 -2.4 11 3-13 180-190 (254)
266 3kr9_A SAM-dependent methyltra 23.8 93 0.0032 20.7 3.8 48 4-54 108-157 (225)
267 3lvj_C Sulfurtransferase TUSA; 23.8 1E+02 0.0035 17.1 5.5 36 5-40 34-70 (82)
268 2ggt_A SCO1 protein homolog, m 23.7 67 0.0023 18.4 2.7 27 4-30 132-163 (164)
269 2qxy_A Response regulator; reg 23.6 1E+02 0.0034 17.0 3.7 29 9-37 6-34 (142)
270 1pn0_A Phenol 2-monooxygenase; 23.3 47 0.0016 25.1 2.4 28 4-31 618-645 (665)
271 3t6k_A Response regulator rece 23.2 1.1E+02 0.0036 17.0 3.7 31 7-37 4-34 (136)
272 1blj_A P55 BLK protein tyrosin 23.2 17 0.0006 21.1 0.0 12 7-18 34-45 (114)
273 4hc4_A Protein arginine N-meth 23.0 12 0.00041 27.0 -0.9 11 2-12 176-186 (376)
274 3m6w_A RRNA methylase; rRNA me 23.0 28 0.00095 25.8 1.1 22 3-24 217-245 (464)
275 2j48_A Two-component sensor ki 22.9 89 0.0031 16.1 3.5 28 10-37 4-31 (119)
276 2gkg_A Response regulator homo 22.8 81 0.0028 16.7 2.8 28 10-37 8-35 (127)
277 3gl9_A Response regulator; bet 22.7 1E+02 0.0034 16.8 3.3 28 10-37 5-32 (122)
278 3h5i_A Response regulator/sens 22.6 1.1E+02 0.0037 17.0 3.5 31 7-37 5-35 (140)
279 3cg4_A Response regulator rece 22.5 1.1E+02 0.0036 16.8 3.7 32 6-37 6-37 (142)
280 1nrv_A Growth factor receptor- 22.5 44 0.0015 19.0 1.7 24 7-33 27-50 (105)
281 2dx0_A Phospholipase C, gamma 22.4 24 0.0008 21.6 0.5 24 7-33 49-72 (138)
282 1khi_A HEX1; membrane sealing, 22.4 21 0.00071 24.0 0.2 14 5-18 40-53 (176)
283 3gt7_A Sensor protein; structu 22.3 1.2E+02 0.004 17.2 4.0 31 7-37 7-37 (154)
284 1rja_A Tyrosine-protein kinase 21.9 39 0.0013 19.1 1.4 24 7-33 24-47 (100)
285 1k68_A Phytochrome response re 21.8 1.1E+02 0.0036 16.5 3.9 29 9-37 4-34 (140)
286 1sqg_A SUN protein, FMU protei 21.7 19 0.00066 25.5 -0.0 13 3-15 362-374 (429)
287 1boo_A Protein (N-4 cytosine-s 21.6 17 0.00057 25.1 -0.4 13 2-14 71-83 (323)
288 1wxx_A TT1595, hypothetical pr 21.0 18 0.00062 25.2 -0.3 34 3-36 313-352 (382)
289 1i3z_A EWS/FLI1 activated tran 21.0 48 0.0016 18.7 1.7 24 7-33 24-47 (103)
290 2eob_A 1-phosphatidylinositol- 21.0 32 0.0011 20.5 0.9 15 3-17 33-50 (124)
291 2dkh_A 3-hydroxybenzoate hydro 20.7 53 0.0018 24.4 2.2 27 4-30 610-636 (639)
292 1ju5_A CRK; CRK, SH2, SH3, ada 20.2 52 0.0018 19.0 1.7 24 7-33 20-43 (109)
293 1qkk_A DCTD, C4-dicarboxylate 20.1 1.3E+02 0.0044 16.9 3.5 28 10-37 6-33 (155)
No 1
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=96.18 E-value=0.0013 Score=40.78 Aligned_cols=59 Identities=17% Similarity=0.259 Sum_probs=35.1
Q ss_pred eeccCCcEEEEEcCHH----------HHHHHHhhhccCCceeEEeecCCCCcC------------------cceEEEEEe
Q 045201 3 RILRPEGAVIIRDQAD----------VLVKVRKIVGGMRWNTKIIDHEDGPLV------------------TEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~~----------vi~~v~~i~~~l~W~~~~~~~e~~~~~------------------~e~iLi~~K 54 (66)
|+|+|||.+++.+... ..+++.+.+..-.+ +.+......+.. .--+++|+|
T Consensus 89 r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~K 167 (176)
T 2ld4_A 89 RILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKK 167 (176)
T ss_dssp HHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEEEEEECCCHHHHHHHHHHTCCCCSSEEEEEEEEEC
T ss_pred HHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeecCcccCCCHHHHHHHHHHhcccCCceEEEEEeccC
Confidence 7899999999964321 14566666665555 333322111111 134788999
Q ss_pred cceecCCC
Q 045201 55 RYWVTENV 62 (66)
Q Consensus 55 ~~W~~~~~ 62 (66)
.-|..+++
T Consensus 168 p~~~~gs~ 175 (176)
T 2ld4_A 168 PNFEVGSS 175 (176)
T ss_dssp CCSSCCSC
T ss_pred CcccccCC
Confidence 88876655
No 2
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=95.70 E-value=0.017 Score=35.99 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=35.4
Q ss_pred eeccCCcEEEEEcC------HHHHHHHHhhhccC---CceeEEeecCCCCcCcceEEEEEecc
Q 045201 3 RILRPEGAVIIRDQ------ADVLVKVRKIVGGM---RWNTKIIDHEDGPLVTEKILFAVKRY 56 (66)
Q Consensus 3 RILRP~G~vIiRD~------~~vi~~v~~i~~~l---~W~~~~~~~e~~~~~~e~iLi~~K~~ 56 (66)
|+|+|||.+++-+- .+-...+..++..+ .|.+.....-+.+.....+++++|.+
T Consensus 127 ~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~pp~~~~~~~~~ 189 (197)
T 3eey_A 127 ELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPPILVCIEKIS 189 (197)
T ss_dssp HHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCCCEEEEEEECC
T ss_pred HhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCCCeEEEEEEcc
Confidence 68999999998851 22344555555554 48876555555444567788888864
No 3
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=94.97 E-value=0.02 Score=35.92 Aligned_cols=51 Identities=2% Similarity=-0.059 Sum_probs=34.3
Q ss_pred eeccCCcEEEEEcCHHHHHHHHhhhccCCceeEE-e-ecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQADVLVKVRKIVGGMRWNTKI-I-DHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~~vi~~v~~i~~~l~W~~~~-~-~~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++-.....-++++.+.+ .|+... . ..-....+...+++++|+
T Consensus 153 ~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 153 HLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp TSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred HhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 68999999999987777778888877 676432 1 122222345778887774
No 4
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=94.43 E-value=0.081 Score=33.65 Aligned_cols=51 Identities=22% Similarity=0.256 Sum_probs=36.8
Q ss_pred eeccCCcEEEE--EcCHHHHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVII--RDQADVLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIi--RD~~~vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K 54 (66)
|+|+|||.+++ -...+-..++.+.+....|++.......|. ..-.+|..+|
T Consensus 167 ~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~-~~~~~l~f~~ 219 (230)
T 3evz_A 167 DHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGT-RWRHSLIFFK 219 (230)
T ss_dssp GGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC--CEEEEEEEC
T ss_pred HHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCC-eEEEEEEEec
Confidence 78999999988 445677889999999999987665544432 2355666655
No 5
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=94.12 E-value=0.051 Score=33.55 Aligned_cols=51 Identities=10% Similarity=0.117 Sum_probs=34.1
Q ss_pred ceeccCCcE-EEEEcCHHHHHHHHhhhc--cCCcee-EEeecCCCCcCcceEEEEEec
Q 045201 2 DRILRPEGA-VIIRDQADVLVKVRKIVG--GMRWNT-KIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 2 DRILRP~G~-vIiRD~~~vi~~v~~i~~--~l~W~~-~~~~~e~~~~~~e~iLi~~K~ 55 (66)
-|.|+|||. +++--...-...+.+++. .-.|.. .+..... +.+++++++|.
T Consensus 151 ~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~---~~~r~~~~~~~ 205 (215)
T 4dzr_A 151 PYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLR---GIDRVIAVTRE 205 (215)
T ss_dssp GGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEECCEEECTT---SCEEEEEEEEC
T ss_pred HHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceEEEEEecC---CCEEEEEEEEc
Confidence 478999999 777555556677777777 556643 3332222 35889998874
No 6
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=93.90 E-value=0.074 Score=33.49 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=36.9
Q ss_pred ceeccCCcEEEEEcCHH---HHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 2 DRILRPEGAVIIRDQAD---VLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 2 DRILRP~G~vIiRD~~~---vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
-|+|+|||.++|-+-.. ..+++.+++....++....+...+ .--+++++|.
T Consensus 138 ~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~---~~~~~~~~k~ 191 (215)
T 2zfu_A 138 NRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNS---HFFLFDFQKT 191 (215)
T ss_dssp HHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECCST---TCEEEEEEEC
T ss_pred HHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecCCC---eEEEEEEEec
Confidence 37899999999987554 567888888888887654433332 3467888885
No 7
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=93.34 E-value=0.12 Score=31.79 Aligned_cols=52 Identities=13% Similarity=-0.020 Sum_probs=28.8
Q ss_pred eeccCCcEEEEEcC------HHHHHHHHhhhcc---CCceeEEeecCCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQ------ADVLVKVRKIVGG---MRWNTKIIDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~------~~vi~~v~~i~~~---l~W~~~~~~~e~~~~~~e~iLi~~K 54 (66)
|.|+|||.+++-.- .+-.+.+..++.. -.|.+.....-+.......++++.|
T Consensus 123 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 183 (185)
T 3mti_A 123 DRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINTPPFLVMLEK 183 (185)
T ss_dssp HHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSCCCEEEEEEE
T ss_pred HhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCCCCeEEEEEe
Confidence 78999999988542 1223444444444 4477643333333223456666665
No 8
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=92.84 E-value=0.16 Score=32.08 Aligned_cols=47 Identities=17% Similarity=0.254 Sum_probs=29.3
Q ss_pred eeccCCcEEEEEcCH----------------HHHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQA----------------DVLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~----------------~vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++-|-. .+-...+.+...-+|++.+... .+.+++++|+
T Consensus 162 ~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~------~dG~~~~~k~ 224 (225)
T 3tr6_A 162 KLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPI------GDGLTLARKK 224 (225)
T ss_dssp HHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECS------TTCEEEEEEC
T ss_pred HhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEEc------CCccEEEEEC
Confidence 679999999997653 1222233334445677665532 3568888885
No 9
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=92.04 E-value=0.2 Score=31.03 Aligned_cols=52 Identities=15% Similarity=0.215 Sum_probs=33.8
Q ss_pred eeccCCcEEEEEcCH--------------------------------HHHHHHHhhhccCCceeEEeecCCCCc---Ccc
Q 045201 3 RILRPEGAVIIRDQA--------------------------------DVLVKVRKIVGGMRWNTKIIDHEDGPL---VTE 47 (66)
Q Consensus 3 RILRP~G~vIiRD~~--------------------------------~vi~~v~~i~~~l~W~~~~~~~e~~~~---~~e 47 (66)
|+|+|||.++|-+-. ...+++.+++..-.++..-......+. ...
T Consensus 140 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~ 219 (227)
T 3e8s_A 140 TLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQEPQHPQSAVPQS 219 (227)
T ss_dssp HTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEECCCCTTCSSCSC
T ss_pred HHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEecCCCCCCCCcee
Confidence 789999999997631 156888889999999865332221111 124
Q ss_pred eEEEEEe
Q 045201 48 KILFAVK 54 (66)
Q Consensus 48 ~iLi~~K 54 (66)
-+++++|
T Consensus 220 ~~~va~k 226 (227)
T 3e8s_A 220 LLMVAER 226 (227)
T ss_dssp EEEEEEE
T ss_pred EEEEeec
Confidence 5666666
No 10
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=91.94 E-value=0.25 Score=32.73 Aligned_cols=47 Identities=11% Similarity=0.220 Sum_probs=28.9
Q ss_pred eeccCCcEEEEEcCH----------------HHHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQA----------------DVLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~----------------~vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|||||.+++-|-. .+-+..+.+...=++++.+... .+++++++|+
T Consensus 158 ~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~------~dG~~~~~k~ 220 (242)
T 3r3h_A 158 KLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAI------ADGMFLVQPI 220 (242)
T ss_dssp HHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESS------SSCEEEEEEC
T ss_pred HhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEc------cCceEEEEEc
Confidence 689999999995532 1222333344445666665433 3569999875
No 11
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=91.58 E-value=0.11 Score=32.21 Aligned_cols=51 Identities=12% Similarity=0.162 Sum_probs=26.8
Q ss_pred eeccCCcEEEEEcCH-HHHHHHHhhhccCCce-eEEeec-CCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQA-DVLVKVRKIVGGMRWN-TKIIDH-EDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~-~vi~~v~~i~~~l~W~-~~~~~~-e~~~~~~e~iLi~~K 54 (66)
|+|+|||.+++..-. +-...+...+... +. +.+... ...+...|..++|++
T Consensus 142 ~~LkpgG~lv~~~~~~~~~~~l~~~l~~~-f~~v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 142 QYINIGGTYIVKMYLGSQTNNLKTYLKGM-FQLVHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp HHEEEEEEEEEEEECSTTHHHHHHHHHTT-EEEEEECCCC-----CCEEEEEEEE
T ss_pred HHccCCCEEEEEEeCCCCHHHHHHHHHHH-HheEEEECCcccCCcCceEEEEEec
Confidence 689999999984311 2233344444432 43 333222 222345689999986
No 12
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=91.47 E-value=0.32 Score=30.73 Aligned_cols=52 Identities=15% Similarity=0.187 Sum_probs=29.8
Q ss_pred eeccCCcEEEEEcCHH----------------HHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQAD----------------VLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~~----------------vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++-|-.- +-+..+.+...=++.+.+...- +..+.+++++|+++
T Consensus 155 ~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~-~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 155 KLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTV-GSKGYDGFIMAVVK 222 (223)
T ss_dssp HTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEE-ETTEEEEEEEEEEC
T ss_pred HhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEecc-CCCCCCeeEEEEEe
Confidence 6899999999864421 1222333334456776654331 11125789988874
No 13
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=91.29 E-value=0.36 Score=31.30 Aligned_cols=47 Identities=15% Similarity=0.259 Sum_probs=28.7
Q ss_pred eeccCCcEEEEEcC-----------------HH----HHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQ-----------------AD----VLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~-----------------~~----vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++-|- .. +-...+.+...-++.+.+... .+.+.+++|+
T Consensus 164 ~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~------~dG~~i~~k~ 231 (232)
T 3ntv_A 164 PLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNI------DDGLAISIKG 231 (232)
T ss_dssp GGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEECS------TTCEEEEEEC
T ss_pred HhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEEEc------CCceEEEEEC
Confidence 78999999999221 11 222333444555777666533 2568999884
No 14
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=90.98 E-value=0.091 Score=34.93 Aligned_cols=49 Identities=10% Similarity=0.015 Sum_probs=35.6
Q ss_pred eeccCCcEEEEEcCHHHHHHHHhhhccCCcee-EEeecCCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQADVLVKVRKIVGGMRWNT-KIIDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~~vi~~v~~i~~~l~W~~-~~~~~e~~~~~~e~iLi~~K 54 (66)
|.|+|||++++-....-..++++++....|+. .+...- .+.+++++++|
T Consensus 226 ~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~d~---~g~~r~~~~~~ 275 (276)
T 2b3t_A 226 NALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDY---GDNERVTLGRY 275 (276)
T ss_dssp GGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEECT---TSSEEEEEEEC
T ss_pred HhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEecC---CCCCcEEEEEE
Confidence 67999999999877777778888887777753 333222 24688988875
No 15
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=90.94 E-value=0.12 Score=31.83 Aligned_cols=13 Identities=31% Similarity=0.710 Sum_probs=11.6
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|+|+|||.+++.+
T Consensus 133 ~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 133 DILQPGGTFLCKT 145 (196)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HHhcCCCEEEEEe
Confidence 6899999999984
No 16
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=90.70 E-value=0.16 Score=32.53 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=23.4
Q ss_pred eeccCCcEEEEEcCHH----------------HHHHHHhhhccCCceeE
Q 045201 3 RILRPEGAVIIRDQAD----------------VLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD~~~----------------vi~~v~~i~~~l~W~~~ 35 (66)
|+|+|||.+|+.+... ..+.+.+++..-.++..
T Consensus 186 ~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 234 (265)
T 2i62_A 186 SLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIE 234 (265)
T ss_dssp TTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEE
T ss_pred hhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEE
Confidence 7899999999976211 23477777777777653
No 17
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=90.53 E-value=0.89 Score=29.80 Aligned_cols=52 Identities=15% Similarity=0.101 Sum_probs=30.9
Q ss_pred eeccCCcEEEEEcCHH------------HHHHH----HhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQAD------------VLVKV----RKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~~------------vi~~v----~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|||||.+++-|-.- ....+ +.+...-+|++.+..+- |....+++++++|+
T Consensus 158 ~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 158 RYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTV-GTKGWDGFTLAWVN 225 (248)
T ss_dssp HTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEC-STTCSEEEEEEEEC
T ss_pred HhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecC-CCCCCCeeEEEEEe
Confidence 6899999999865431 12223 33344556776554222 21235889999986
No 18
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=90.11 E-value=0.13 Score=30.32 Aligned_cols=52 Identities=13% Similarity=0.246 Sum_probs=28.0
Q ss_pred eeccCCcEEEEEcC-HHHHHHHHhhhccCCcee-EEeecC-CCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQ-ADVLVKVRKIVGGMRWNT-KIIDHE-DGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~-~~vi~~v~~i~~~l~W~~-~~~~~e-~~~~~~e~iLi~~K~ 55 (66)
|+|+|||.+++-.- .+-...+.+.+.. .|.. .+.... ......|..++|++.
T Consensus 124 ~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (180)
T 1ej0_A 124 DVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSREVYIVATGR 178 (180)
T ss_dssp HHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCCEEEEEEEEE
T ss_pred HHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCceEEEEEccC
Confidence 68999999999532 1222333333333 3653 222222 222346888888763
No 19
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=89.83 E-value=0.26 Score=33.07 Aligned_cols=51 Identities=14% Similarity=0.156 Sum_probs=35.5
Q ss_pred eeccCCcEEEEEcCH---------------------------------------HHHHHHHhhhccCCceeEEeecCCCC
Q 045201 3 RILRPEGAVIIRDQA---------------------------------------DVLVKVRKIVGGMRWNTKIIDHEDGP 43 (66)
Q Consensus 3 RILRP~G~vIiRD~~---------------------------------------~vi~~v~~i~~~l~W~~~~~~~e~~~ 43 (66)
|.|+|||.+++.+-. ...+++.+++..-.++....... .
T Consensus 215 ~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~--~ 292 (305)
T 3ocj_A 215 QALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFEDD--R 292 (305)
T ss_dssp HHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEECC--T
T ss_pred HhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEcc--c
Confidence 689999999998711 24778888999889986433322 2
Q ss_pred cCcceEEEEEec
Q 045201 44 LVTEKILFAVKR 55 (66)
Q Consensus 44 ~~~e~iLi~~K~ 55 (66)
...-..++++|+
T Consensus 293 ~~~~~~v~a~Kp 304 (305)
T 3ocj_A 293 ARLFPTVIARKP 304 (305)
T ss_dssp TSSSCEEEEECC
T ss_pred CceeeEEEEecC
Confidence 234567888874
No 20
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=89.49 E-value=0.94 Score=29.25 Aligned_cols=58 Identities=10% Similarity=0.017 Sum_probs=35.2
Q ss_pred ceeccCCcEEEEEcC---HHHHHHHHhhhccCCceeEEee--cCCCCcCcceEEEEEecceec
Q 045201 2 DRILRPEGAVIIRDQ---ADVLVKVRKIVGGMRWNTKIID--HEDGPLVTEKILFAVKRYWVT 59 (66)
Q Consensus 2 DRILRP~G~vIiRD~---~~vi~~v~~i~~~l~W~~~~~~--~e~~~~~~e~iLi~~K~~W~~ 59 (66)
-|.|+|||.+++-+. .+-+.++.+.+....+...... .-........+++++|.=..|
T Consensus 161 ~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~~~~~ 223 (240)
T 1xdz_A 161 LPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKIKNTP 223 (240)
T ss_dssp GGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred HHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEecCCCC
Confidence 378999999998764 3445566677777788653211 111112345677777764443
No 21
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=89.44 E-value=0.44 Score=29.90 Aligned_cols=37 Identities=8% Similarity=-0.068 Sum_probs=21.8
Q ss_pred HHHHHHhhhccCCceeE-EeecC----CCCcCcceEEEEEec
Q 045201 19 VLVKVRKIVGGMRWNTK-IIDHE----DGPLVTEKILFAVKR 55 (66)
Q Consensus 19 vi~~v~~i~~~l~W~~~-~~~~e----~~~~~~e~iLi~~K~ 55 (66)
..+++++++..-.++.. +...- .++....-+++|+|+
T Consensus 204 ~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK~ 245 (246)
T 1y8c_A 204 KEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKLG 245 (246)
T ss_dssp CHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEEC
T ss_pred CHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEec
Confidence 56788888888888754 32221 111223457788874
No 22
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=89.29 E-value=0.36 Score=31.02 Aligned_cols=32 Identities=9% Similarity=0.133 Sum_probs=23.9
Q ss_pred eeccCCcEEEEE-cCHHHHHHHHhhhccCCcee
Q 045201 3 RILRPEGAVIIR-DQADVLVKVRKIVGGMRWNT 34 (66)
Q Consensus 3 RILRP~G~vIiR-D~~~vi~~v~~i~~~l~W~~ 34 (66)
|+|+|||.+++. |..+..+.+...+....|..
T Consensus 141 ~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 141 EVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLL 173 (213)
T ss_dssp HHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEE
T ss_pred HHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcc
Confidence 689999999987 56667777776666656653
No 23
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=89.21 E-value=0.45 Score=31.12 Aligned_cols=48 Identities=17% Similarity=0.136 Sum_probs=28.3
Q ss_pred eeccCCcEEEEEcCH------------HHHHHHHhhhccCCce----eEEeecCCCCcCcceEEEEEecc
Q 045201 3 RILRPEGAVIIRDQA------------DVLVKVRKIVGGMRWN----TKIIDHEDGPLVTEKILFAVKRY 56 (66)
Q Consensus 3 RILRP~G~vIiRD~~------------~vi~~v~~i~~~l~W~----~~~~~~e~~~~~~e~iLi~~K~~ 56 (66)
|.|||||.+++-|-. .....++++...++++ +.+... .+++++++|.+
T Consensus 151 ~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~------gdGl~~~~~~~ 214 (221)
T 3dr5_A 151 PLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPL------GAGLTVVTKAL 214 (221)
T ss_dssp HHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESS------TTCEEEEEECC
T ss_pred HHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeec------cchHHHHHHHH
Confidence 689999999984421 1122344444444443 333322 36799999876
No 24
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=89.16 E-value=0.5 Score=29.50 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=26.8
Q ss_pred eeccCCcEEEEEc-CHHHHHHHHhhhccCCceeE
Q 045201 3 RILRPEGAVIIRD-QADVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD-~~~vi~~v~~i~~~l~W~~~ 35 (66)
|.|+|||.+++-+ ..+-..++.+++....|++.
T Consensus 130 ~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 163 (204)
T 3e05_A 130 RRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVE 163 (204)
T ss_dssp HHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEE
T ss_pred HhcCCCeEEEEEecccccHHHHHHHHHHCCCcee
Confidence 6899999999984 45778888888888888644
No 25
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=89.13 E-value=0.57 Score=30.18 Aligned_cols=48 Identities=15% Similarity=0.261 Sum_probs=30.8
Q ss_pred eeccCCcEEEEEcC------------HHHHHH----HHhhhccCCceeEEeecCCCCcCcceEEEEEecc
Q 045201 3 RILRPEGAVIIRDQ------------ADVLVK----VRKIVGGMRWNTKIIDHEDGPLVTEKILFAVKRY 56 (66)
Q Consensus 3 RILRP~G~vIiRD~------------~~vi~~----v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~~ 56 (66)
|.|+|||.+++-+- ...... .+.+...-++++...... +.+.+++|++
T Consensus 169 ~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------~g~~~~~~~~ 232 (239)
T 2hnk_A 169 KLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSLVDVSLVPIA------DGVSLVRKRL 232 (239)
T ss_dssp HHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECST------TCEEEEEECC
T ss_pred HHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEEcC------CceEeeeehh
Confidence 67999999999761 122222 334445566776665443 4589999976
No 26
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=89.05 E-value=0.67 Score=30.03 Aligned_cols=47 Identities=17% Similarity=0.300 Sum_probs=28.4
Q ss_pred eeccCCcEEEEEcCH------------HHHHHHHh----hhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQA------------DVLVKVRK----IVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~------------~vi~~v~~----i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++-|.. .....+++ +...-++++.+... .+++.+++|+
T Consensus 170 ~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~------~dG~~~~~~~ 232 (232)
T 3cbg_A 170 NLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIPL------GDGMTLALKK 232 (232)
T ss_dssp HTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECS------BTCEEEEEEC
T ss_pred HHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEEc------CCeEEEEEeC
Confidence 689999999995422 12223333 33455677665433 2468888874
No 27
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=88.85 E-value=0.26 Score=30.82 Aligned_cols=49 Identities=14% Similarity=0.066 Sum_probs=33.1
Q ss_pred eeccCCcEEEEEcCH-------------HHHHHHHhhhccCCceeE-EeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQA-------------DVLVKVRKIVGGMRWNTK-IIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~-------------~vi~~v~~i~~~l~W~~~-~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++-+-. ...+++..++....++.. ..+... ..-+++++|.
T Consensus 131 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~----~~~~~~~~k~ 193 (219)
T 3dh0_A 131 RVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGK----YCFGVYAMIV 193 (219)
T ss_dssp HHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETT----TEEEEEEECC
T ss_pred HHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCC----ceEEEEEEec
Confidence 789999999997621 235778888888888753 322221 3567777774
No 28
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=88.79 E-value=0.36 Score=29.92 Aligned_cols=50 Identities=8% Similarity=0.039 Sum_probs=34.3
Q ss_pred eeccCCcEEEEEcCH----------------HHHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQA----------------DVLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~----------------~vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K 54 (66)
|.|+|||.+++-+-. -..+++++++....++........+ .+...|...|
T Consensus 129 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~--~p~~~l~~~~ 194 (203)
T 3h2b_A 129 MAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR--FPHAYLTAEA 194 (203)
T ss_dssp HTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT--SSEEEEEEEE
T ss_pred HHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC--Ccchhhhhhh
Confidence 789999999997622 2368888999999998764444433 3444555444
No 29
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=88.69 E-value=0.16 Score=35.59 Aligned_cols=50 Identities=14% Similarity=0.313 Sum_probs=31.3
Q ss_pred eeccCCcEEEEEc-CHHHHHHHHhhhccCCc-eeEEeecCCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRD-QADVLVKVRKIVGGMRW-NTKIIDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD-~~~vi~~v~~i~~~l~W-~~~~~~~e~~~~~~e~iLi~~K 54 (66)
|.|+|||.+++-. ...-..++.++++...+ .+....+ ...+.|.+|+|+.
T Consensus 159 r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~as--r~~s~e~~lv~~~ 210 (290)
T 2xyq_A 159 QKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNV--NASSSEAFLIGAN 210 (290)
T ss_dssp HHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGG--GTTSSCEEEEEEE
T ss_pred HhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEc--CCCchheEEecCC
Confidence 6799999999844 11223466677777645 3444412 2224688998876
No 30
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=88.45 E-value=0.85 Score=30.25 Aligned_cols=54 Identities=22% Similarity=0.212 Sum_probs=36.1
Q ss_pred ceeccCCcEEEEE-------------------cC---HHHHHHHHhhhccCCceeEEee--cCCCCc-CcceEEEEEec
Q 045201 2 DRILRPEGAVIIR-------------------DQ---ADVLVKVRKIVGGMRWNTKIID--HEDGPL-VTEKILFAVKR 55 (66)
Q Consensus 2 DRILRP~G~vIiR-------------------D~---~~vi~~v~~i~~~l~W~~~~~~--~e~~~~-~~e~iLi~~K~ 55 (66)
-|+|+|||.+++- |. ...++++..++.+..|.+.-.+ .-.++. +-|-++.++|.
T Consensus 124 ~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 124 YEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKGGAGNVEFLVHLLKD 202 (232)
T ss_dssp HHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSCBTTTBCCEEEEEEES
T ss_pred HHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCCCCCCCHHHHHHHhhc
Confidence 3789999999874 11 1356788888988899865332 222333 35778888873
No 31
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=88.45 E-value=0.76 Score=28.64 Aligned_cols=49 Identities=14% Similarity=0.236 Sum_probs=31.7
Q ss_pred ceeccCCcEEEEEcCH----H---------------------------HHHHHHhhhccCCceeEEeecCCCCcCcceEE
Q 045201 2 DRILRPEGAVIIRDQA----D---------------------------VLVKVRKIVGGMRWNTKIIDHEDGPLVTEKIL 50 (66)
Q Consensus 2 DRILRP~G~vIiRD~~----~---------------------------vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iL 50 (66)
-|+|+|||.+++.+.. . ..+++++++..-.+++......+ -.=++
T Consensus 132 ~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~~----~~w~~ 207 (220)
T 3hnr_A 132 SQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLNH----FVWVM 207 (220)
T ss_dssp HHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECSS----SEEEE
T ss_pred HHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeeccc----eEEEE
Confidence 3789999999998621 1 23677888888888765443331 23355
Q ss_pred EEEe
Q 045201 51 FAVK 54 (66)
Q Consensus 51 i~~K 54 (66)
.++|
T Consensus 208 ~~~~ 211 (220)
T 3hnr_A 208 EATK 211 (220)
T ss_dssp EEEE
T ss_pred eehh
Confidence 5555
No 32
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=88.28 E-value=0.76 Score=28.99 Aligned_cols=47 Identities=21% Similarity=0.279 Sum_probs=28.5
Q ss_pred eeccCCcEEEEEcC------------HHHHHHHHh----hhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQ------------ADVLVKVRK----IVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~------------~~vi~~v~~----i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++-|. ......+++ +...=++++.+.... +++++++|.
T Consensus 167 ~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~------dGl~~~~k~ 229 (229)
T 2avd_A 167 QLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLG------DGLTLAFKI 229 (229)
T ss_dssp HHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEECST------TCEEEEEEC
T ss_pred HHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEecC------CceEEEEEC
Confidence 67999999999542 222333333 334456666655332 568888874
No 33
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=88.08 E-value=0.22 Score=30.47 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=22.0
Q ss_pred ceeccCCcEEEEEcCH--------------HHHHHHHhhhccCCceeEE
Q 045201 2 DRILRPEGAVIIRDQA--------------DVLVKVRKIVGGMRWNTKI 36 (66)
Q Consensus 2 DRILRP~G~vIiRD~~--------------~vi~~v~~i~~~l~W~~~~ 36 (66)
-|+|+|||.+++-+.. -..+++++++.. |+...
T Consensus 123 ~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~ 169 (199)
T 2xvm_A 123 QRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVK 169 (199)
T ss_dssp HHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEE
T ss_pred HHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEE
Confidence 3789999998775421 134667777777 77543
No 34
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=87.71 E-value=0.57 Score=29.61 Aligned_cols=33 Identities=12% Similarity=0.147 Sum_probs=25.5
Q ss_pred eeccCCcEEEEEc-CHHHHHHHHhhhccCCceeE
Q 045201 3 RILRPEGAVIIRD-QADVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD-~~~vi~~v~~i~~~l~W~~~ 35 (66)
|+|+|||.+++.- ..+....+.+++....|...
T Consensus 144 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~ 177 (214)
T 1yzh_A 144 RILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLN 177 (214)
T ss_dssp HHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred HHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeee
Confidence 6899999999975 55677788777776677653
No 35
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=87.66 E-value=0.32 Score=29.92 Aligned_cols=13 Identities=38% Similarity=0.606 Sum_probs=11.7
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|+|+|||.++|-+
T Consensus 136 ~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 136 RILKSGGKTYIGG 148 (219)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HhCCCCCEEEEEe
Confidence 7899999999975
No 36
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=87.34 E-value=0.53 Score=28.31 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=24.8
Q ss_pred eeccCCcEEEEEcCHH---HHHHHHhhhccCCceeEE
Q 045201 3 RILRPEGAVIIRDQAD---VLVKVRKIVGGMRWNTKI 36 (66)
Q Consensus 3 RILRP~G~vIiRD~~~---vi~~v~~i~~~l~W~~~~ 36 (66)
|+|+|+|.+++-.... ...++.+++....++..-
T Consensus 135 ~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 171 (195)
T 3cgg_A 135 RALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELEN 171 (195)
T ss_dssp HHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEE
T ss_pred HHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEee
Confidence 7899999999965332 366777777777887643
No 37
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=87.28 E-value=0.55 Score=30.02 Aligned_cols=51 Identities=18% Similarity=0.126 Sum_probs=27.1
Q ss_pred eeccCCcEEEEEc--CHHHHHHHHhhhccCCce-eEEeecC-CCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRD--QADVLVKVRKIVGGMRWN-TKIIDHE-DGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD--~~~vi~~v~~i~~~l~W~-~~~~~~e-~~~~~~e~iLi~~K~ 55 (66)
|.|||||.+++-- ..+ ...+...++.. +. +.+..+. .-+.+.|..++|++.
T Consensus 127 ~~LkpGG~lv~k~~~~~~-~~~~~~~l~~~-F~~v~~~kP~asR~~s~E~y~v~~~~ 181 (191)
T 3dou_A 127 RYLRNGGNVLLKQFQGDM-TNDFIAIWRKN-FSSYKISKPPASRGSSSEIYIMFFGF 181 (191)
T ss_dssp HHEEEEEEEEEEEECSTH-HHHHHHHHGGG-EEEEEEECC------CCEEEEEEEEE
T ss_pred HHccCCCEEEEEEcCCCC-HHHHHHHHHHh-cCEEEEECCCCccCCCceEEEEEeee
Confidence 6899999998643 222 23444444432 33 3333222 222357999999763
No 38
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=87.23 E-value=1.4 Score=27.56 Aligned_cols=53 Identities=6% Similarity=0.087 Sum_probs=33.9
Q ss_pred eeccCCcEEEEEcCHHH----------------------HHHHH----hhhccCCceeEEeecCCC---CcCcceEEEEE
Q 045201 3 RILRPEGAVIIRDQADV----------------------LVKVR----KIVGGMRWNTKIIDHEDG---PLVTEKILFAV 53 (66)
Q Consensus 3 RILRP~G~vIiRD~~~v----------------------i~~v~----~i~~~l~W~~~~~~~e~~---~~~~e~iLi~~ 53 (66)
|.|+|||.+|+-+..+. ..+++ .++..-.+++......++ -...-+|-+|+
T Consensus 129 ~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~~~~~g~~~qi~~~~ 208 (219)
T 3jwg_A 129 EFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEIDDEFGSPTQMGVFT 208 (219)
T ss_dssp TTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEEESCCCTTSCCSEEEEEEE
T ss_pred HhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEEecCCccccCCCCeEEEEEe
Confidence 78999998887654432 23333 777777888765522221 22368899999
Q ss_pred ec
Q 045201 54 KR 55 (66)
Q Consensus 54 K~ 55 (66)
|.
T Consensus 209 ~~ 210 (219)
T 3jwg_A 209 LG 210 (219)
T ss_dssp EC
T ss_pred cc
Confidence 85
No 39
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=87.23 E-value=0.84 Score=29.91 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=28.6
Q ss_pred eeccCCcEEEEEcCHHHHHHHHhhhccCCceeE
Q 045201 3 RILRPEGAVIIRDQADVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD~~~vi~~v~~i~~~l~W~~~ 35 (66)
|.|+|||.+++=-..+-+.++...+....|...
T Consensus 164 ~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 164 SLLKQGGKANFVHRPERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp HHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEE
T ss_pred HHccCCcEEEEEEcHHHHHHHHHHHHHCCCceE
Confidence 689999999998778888899999998888764
No 40
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=86.67 E-value=0.42 Score=28.69 Aligned_cols=33 Identities=12% Similarity=0.342 Sum_probs=25.8
Q ss_pred eeccCCcEEEEEc-CHHHHHHHHhhhccCCceeE
Q 045201 3 RILRPEGAVIIRD-QADVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD-~~~vi~~v~~i~~~l~W~~~ 35 (66)
|+|+|||.+++-+ ..+...++.+++....|++.
T Consensus 122 ~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 122 DKLKPGGRIIVTAILLETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp HTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCE
T ss_pred HhcCCCcEEEEEecCcchHHHHHHHHHHCCCceE
Confidence 6899999999865 46777888888887777544
No 41
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=86.62 E-value=1.1 Score=28.83 Aligned_cols=13 Identities=31% Similarity=0.598 Sum_probs=11.2
Q ss_pred ceeccCCcEEEEE
Q 045201 2 DRILRPEGAVIIR 14 (66)
Q Consensus 2 DRILRP~G~vIiR 14 (66)
-|.|+|||.+++-
T Consensus 148 ~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 148 EFFLKEKGEVVIM 160 (210)
T ss_dssp HHHEEEEEEEEEE
T ss_pred HHHhCCCCEEEEE
Confidence 3789999999985
No 42
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=86.60 E-value=0.99 Score=29.45 Aligned_cols=13 Identities=15% Similarity=0.437 Sum_probs=11.3
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|||||.+++.+
T Consensus 169 ~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 169 KLVKVGGIVAYDN 181 (237)
T ss_dssp HHEEEEEEEEEEC
T ss_pred HhcCCCeEEEEec
Confidence 5799999999975
No 43
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=86.41 E-value=0.46 Score=30.54 Aligned_cols=51 Identities=14% Similarity=0.082 Sum_probs=27.7
Q ss_pred eeccCCcEEEE----EcCHH-------HHHHHHhhhccCCceeE-EeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVII----RDQAD-------VLVKVRKIVGGMRWNTK-IIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIi----RD~~~-------vi~~v~~i~~~l~W~~~-~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++ +.... .-..++ ++.+..++.. ..+.. ......-+++++|+
T Consensus 166 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~-~~~~~~~~v~~~k~ 228 (230)
T 1fbn_A 166 WFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIE-PFEKDHVMFVGIWE 228 (230)
T ss_dssp HHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECT-TTSTTEEEEEEEEC
T ss_pred HhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccC-CCccceEEEEEEeC
Confidence 68999999999 32111 225555 5555556543 22222 11123567788773
No 44
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=85.98 E-value=1.3 Score=29.31 Aligned_cols=13 Identities=8% Similarity=0.281 Sum_probs=11.4
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|+|||.+++.+
T Consensus 178 ~~LkpGG~lv~d~ 190 (247)
T 1sui_A 178 DLVKVGGVIGYDN 190 (247)
T ss_dssp HHBCTTCCEEEEC
T ss_pred HhCCCCeEEEEec
Confidence 6799999999865
No 45
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=85.76 E-value=0.76 Score=28.85 Aligned_cols=13 Identities=23% Similarity=0.304 Sum_probs=11.4
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|+|||.+++-|
T Consensus 148 ~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 148 RCLAKNALLIAVN 160 (210)
T ss_dssp GGEEEEEEEEEES
T ss_pred HhcCCCeEEEEEC
Confidence 7899999999965
No 46
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=85.75 E-value=0.44 Score=30.82 Aligned_cols=33 Identities=0% Similarity=-0.016 Sum_probs=24.1
Q ss_pred HHHHHhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 20 LVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 20 i~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
.+++++++..-.+++.-..... ....+++|+|.
T Consensus 217 ~~el~~ll~~aGF~v~~~~~~~---~~~~~~va~K~ 249 (263)
T 3pfg_A 217 REQYERAFTAAGLSVEFMPGGP---SGRGLFTGLPG 249 (263)
T ss_dssp HHHHHHHHHHTTEEEEEESSTT---TSSCEEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEeeCCC---CCceeEEEecC
Confidence 6889999999999865443222 34679999995
No 47
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=85.02 E-value=0.29 Score=29.49 Aligned_cols=48 Identities=15% Similarity=0.166 Sum_probs=25.8
Q ss_pred eeccCCcEEEEEcCHH-HHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQAD-VLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~~-vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K 54 (66)
|+|+|||.+++-+... ...++.+.+...-+++.+....+ .-.++.++|
T Consensus 145 ~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~k 193 (194)
T 1dus_A 145 ELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIKG----GYRVLKSKK 193 (194)
T ss_dssp HHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEEEET----TEEEEEEEC
T ss_pred HHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEEecCC----cEEEEEEee
Confidence 6899999999876543 33334444444323344433332 234555554
No 48
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=84.42 E-value=2.2 Score=29.94 Aligned_cols=53 Identities=21% Similarity=0.157 Sum_probs=36.7
Q ss_pred ceeccCCcEEEEEcC----------------------HHHHHHHHhhhccCCceeE--EeecCCCCcC-cceEEEEEe
Q 045201 2 DRILRPEGAVIIRDQ----------------------ADVLVKVRKIVGGMRWNTK--IIDHEDGPLV-TEKILFAVK 54 (66)
Q Consensus 2 DRILRP~G~vIiRD~----------------------~~vi~~v~~i~~~l~W~~~--~~~~e~~~~~-~e~iLi~~K 54 (66)
-|+|+|||.+++=.+ ..+++++..++.+..|.+. ......|+.+ .|=++.++|
T Consensus 172 ~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 172 AKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp HHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCCGGGCCCEEEEEEE
T ss_pred HHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCcCHHHHHHhhh
Confidence 489999999987511 2478889999999999864 2233345543 466777766
No 49
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=84.37 E-value=0.42 Score=32.56 Aligned_cols=52 Identities=4% Similarity=0.024 Sum_probs=28.4
Q ss_pred ceeccCCc--EEEEE----cCHHHHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEe
Q 045201 2 DRILRPEG--AVIIR----DQADVLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 2 DRILRP~G--~vIiR----D~~~vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K 54 (66)
.|+|+||| .+++. +..++++.++.+...+. .+.+...-.-....|..++|.+
T Consensus 170 ~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~~~ 227 (265)
T 2oxt_A 170 EKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTSRA 227 (265)
T ss_dssp HHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESSC
T ss_pred HHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEecC
Confidence 37899999 88885 45544455554443222 2233322222234677777754
No 50
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=84.01 E-value=0.43 Score=31.55 Aligned_cols=29 Identities=17% Similarity=0.052 Sum_probs=22.4
Q ss_pred eeccCCcEEEEE-cCHHHHHHHHhhhccCC
Q 045201 3 RILRPEGAVIIR-DQADVLVKVRKIVGGMR 31 (66)
Q Consensus 3 RILRP~G~vIiR-D~~~vi~~v~~i~~~l~ 31 (66)
|+|+|||.+++. |..+..+.+.+.+..-.
T Consensus 156 ~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 156 YVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp HHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred HHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 789999999986 77777777777665544
No 51
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=83.89 E-value=0.8 Score=28.10 Aligned_cols=49 Identities=18% Similarity=0.181 Sum_probs=27.5
Q ss_pred eeccCCcEEEEEcCHHHHHHHHhhh--ccCCceeEEeecCCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQADVLVKVRKIV--GGMRWNTKIIDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~~vi~~v~~i~--~~l~W~~~~~~~e~~~~~~e~iLi~~K 54 (66)
|+|+|||.+++.+-..- ...+.++ ....|........++. .--+++++|
T Consensus 147 ~~LkpgG~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 197 (215)
T 2pxx_A 147 RVLVPGGRFISMTSAAP-HFRTRHYAQAYYGWSLRHATYGSGF--HFHLYLMHK 197 (215)
T ss_dssp HHEEEEEEEEEEESCCH-HHHHHHHCCGGGCEEEEEEEESGGG--CEEEEEEEE
T ss_pred HhCcCCCEEEEEeCCCc-HHHHHHHhccccCcEEEEEEecCcc--eEEEEEEEe
Confidence 78999999999886331 1122333 3346876543333321 234666665
No 52
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=83.15 E-value=2.4 Score=28.56 Aligned_cols=54 Identities=17% Similarity=0.241 Sum_probs=32.7
Q ss_pred eeccCCcEEEEEc-----CHHHHHHHHhhhccCCceeEEeecCCC--CcCcceEEEEEecc
Q 045201 3 RILRPEGAVIIRD-----QADVLVKVRKIVGGMRWNTKIIDHEDG--PLVTEKILFAVKRY 56 (66)
Q Consensus 3 RILRP~G~vIiRD-----~~~vi~~v~~i~~~l~W~~~~~~~e~~--~~~~e~iLi~~K~~ 56 (66)
|.|+|||.+++.- ..+.+..+.+.+++.=-.+......-. +.+...+++|.|++
T Consensus 177 ~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ask~~ 237 (275)
T 1iy9_A 177 KALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTIGSKKY 237 (275)
T ss_dssp HHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEEEESSC
T ss_pred HhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEEeeCCC
Confidence 6899999999973 244556665555555334444322211 12346788999874
No 53
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=83.15 E-value=1.5 Score=27.68 Aligned_cols=49 Identities=16% Similarity=0.178 Sum_probs=26.8
Q ss_pred eeccCCcEEEEEcCHH----------H-HHHHHhhhccCCceeE-EeecCCCCc-CcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQAD----------V-LVKVRKIVGGMRWNTK-IIDHEDGPL-VTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~~----------v-i~~v~~i~~~l~W~~~-~~~~e~~~~-~~e~iLi~~K~ 55 (66)
|.|+|||.+++--... + -.+++++..+ ++.. ..+.. ++ ...-+++++|+
T Consensus 166 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--f~~~~~~~~~--~~~~~~~~~~~~~~ 227 (227)
T 1g8a_A 166 VYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEY--FEVIERLNLE--PYEKDHALFVVRKT 227 (227)
T ss_dssp HHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTT--SEEEEEEECT--TTSSSEEEEEEECC
T ss_pred HhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHHHhh--ceeeeEeccC--cccCCCEEEEEEeC
Confidence 7899999999842111 1 2456666444 7643 33332 22 23456777763
No 54
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=83.12 E-value=0.22 Score=37.34 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=27.9
Q ss_pred eeccCCcEEEEEcC------------------HHHHHHHHhhhccCCceeE
Q 045201 3 RILRPEGAVIIRDQ------------------ADVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD~------------------~~vi~~v~~i~~~l~W~~~ 35 (66)
|.|+|||.+||.|- ..+++.+++++..++|...
T Consensus 312 rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~~~ 362 (419)
T 3sso_A 312 PHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQEL 362 (419)
T ss_dssp GGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGGGS
T ss_pred HhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhccccc
Confidence 78999999999643 4689999999999998753
No 55
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=82.59 E-value=0.76 Score=28.84 Aligned_cols=33 Identities=3% Similarity=0.018 Sum_probs=18.7
Q ss_pred HHHHHhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 20 LVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 20 i~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
.+++++++..-.+++...... ....-+++|+|+
T Consensus 207 ~~~~~~ll~~aGF~v~~~~~~---~~~~~~~va~K~ 239 (239)
T 3bxo_A 207 QAEYEAAFTAAGLRVEYLEGG---PSGRGLFVGVPA 239 (239)
T ss_dssp HHHHHHHHHHTTEEEEEESST---TTSSCEEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEeEcC---CCCceEEEEecC
Confidence 466777777777754433221 123567777773
No 56
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=82.56 E-value=0.36 Score=32.51 Aligned_cols=34 Identities=6% Similarity=0.193 Sum_probs=28.3
Q ss_pred eeccCCcEEEEEcCH-------HHHHHHHhhhccCCceeEE
Q 045201 3 RILRPEGAVIIRDQA-------DVLVKVRKIVGGMRWNTKI 36 (66)
Q Consensus 3 RILRP~G~vIiRD~~-------~vi~~v~~i~~~l~W~~~~ 36 (66)
|.|+|||.+++-+.. +.+.++.+.+....|++..
T Consensus 213 ~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 213 SIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp HHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred HHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 689999999996553 5678889999999998765
No 57
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=81.99 E-value=2.1 Score=28.81 Aligned_cols=53 Identities=17% Similarity=0.068 Sum_probs=31.0
Q ss_pred eeccCCcEEEEEc-----CHHHHHHHHhhhccCCceeEEeecC-CCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRD-----QADVLVKVRKIVGGMRWNTKIIDHE-DGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD-----~~~vi~~v~~i~~~l~W~~~~~~~e-~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++.- ..+.+..+.+.++..--.+...... ....+...+++|.|+
T Consensus 181 ~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 181 DALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp HHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSSSEEEEEEEES
T ss_pred HhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCCCceEEEEEeeCC
Confidence 6899999999973 3455555555554443334432211 111235778999986
No 58
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=81.55 E-value=2.7 Score=26.72 Aligned_cols=51 Identities=16% Similarity=0.152 Sum_probs=29.0
Q ss_pred eeccCCcEEEEEcCHHH----------HHHHHhhhccCCceeEE-eecCCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQADV----------LVKVRKIVGGMRWNTKI-IDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~~v----------i~~v~~i~~~l~W~~~~-~~~e~~~~~~e~iLi~~K 54 (66)
|.|+|||.+++--.... ..+-.+++....++..- ...+.-+ ...-++++++
T Consensus 170 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~-~~~~~v~~~~ 231 (233)
T 2ipx_A 170 TFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYE-RDHAVVVGVY 231 (233)
T ss_dssp HHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTS-SSEEEEEEEE
T ss_pred HHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCcc-CCcEEEEEEe
Confidence 68999999999533321 22224666777787543 3333222 2345666665
No 59
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=81.27 E-value=1.1 Score=28.55 Aligned_cols=33 Identities=6% Similarity=0.028 Sum_probs=26.1
Q ss_pred eeccCCcEEEEEc-CHHHHHHHHhhhccCCceeE
Q 045201 3 RILRPEGAVIIRD-QADVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD-~~~vi~~v~~i~~~l~W~~~ 35 (66)
|.|+|||.+++-. ..+-+.++.++++...++..
T Consensus 142 ~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~ 175 (204)
T 3njr_A 142 EWLAPGTRIVANAVTLESETLLTQLHARHGGQLL 175 (204)
T ss_dssp HHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEE
T ss_pred HhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEE
Confidence 6799999999976 56777888888877777653
No 60
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=81.25 E-value=0.64 Score=30.29 Aligned_cols=27 Identities=7% Similarity=0.117 Sum_probs=19.6
Q ss_pred eeccCCcEEEEEcC-HHHHHHHHhhhcc
Q 045201 3 RILRPEGAVIIRDQ-ADVLVKVRKIVGG 29 (66)
Q Consensus 3 RILRP~G~vIiRD~-~~vi~~v~~i~~~ 29 (66)
|+|+|||.+++.-+ .+..+.+..++.+
T Consensus 138 r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 138 SKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp HHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 68999999988754 5556666666544
No 61
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=80.98 E-value=0.87 Score=32.37 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=28.9
Q ss_pred eeccCCcEEEEEcCHHHHHHH-----HhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQADVLVKV-----RKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~~vi~~v-----~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|||||.+++++...+-.-+ ..... .|+.....+..+. ....+.+++|.
T Consensus 210 r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p~~~-v~N~vv~a~k~ 264 (298)
T 3fpf_A 210 RYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLPSGK-VNNTSVLVFKC 264 (298)
T ss_dssp HHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECCCTT-CCCEEEEEEEC
T ss_pred HHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECCCCC-cCcEEEEEEcc
Confidence 789999999999964431110 11222 5665544333332 23668888774
No 62
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=80.97 E-value=0.8 Score=30.95 Aligned_cols=52 Identities=13% Similarity=0.233 Sum_probs=27.2
Q ss_pred eeccCCcEEEEEc----------CHHHHHHHHhhhccCCceeE-EeecCCCCc-CcceEEEEEecc
Q 045201 3 RILRPEGAVIIRD----------QADVLVKVRKIVGGMRWNTK-IIDHEDGPL-VTEKILFAVKRY 56 (66)
Q Consensus 3 RILRP~G~vIiRD----------~~~vi~~v~~i~~~l~W~~~-~~~~e~~~~-~~e~iLi~~K~~ 56 (66)
|.|+|||.+++-= ..++...+.+.+.+-..+.. ..+.+ |+ ...-+++++|++
T Consensus 169 ~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~--p~~~~h~~v~~~~~~ 232 (232)
T 3id6_C 169 FFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLD--PYDKDHAIVLSKYKG 232 (232)
T ss_dssp HHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECT--TTCSSCEEEEEEEC-
T ss_pred HhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccC--CCcCceEEEEEEeCC
Confidence 5899999999741 11223334444433334332 22332 33 256788888764
No 63
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=80.91 E-value=1.3 Score=27.47 Aligned_cols=13 Identities=23% Similarity=0.621 Sum_probs=11.6
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|+|+|||.+++-+
T Consensus 129 ~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 129 RVLKPGAYLYLVE 141 (235)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HHcCCCeEEEEEE
Confidence 7899999999975
No 64
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=80.67 E-value=1.9 Score=25.72 Aligned_cols=32 Identities=6% Similarity=0.008 Sum_probs=23.1
Q ss_pred eeccCCcEEEEEcC-HHHHHHHHhhhccCCcee
Q 045201 3 RILRPEGAVIIRDQ-ADVLVKVRKIVGGMRWNT 34 (66)
Q Consensus 3 RILRP~G~vIiRD~-~~vi~~v~~i~~~l~W~~ 34 (66)
|.|+|||.+++-+- .+-...+..++.....+.
T Consensus 115 ~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~ 147 (178)
T 3hm2_A 115 KRLPVGGRLVANAVTVESEQMLWALRKQFGGTI 147 (178)
T ss_dssp HTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEE
T ss_pred HhcCCCCEEEEEeeccccHHHHHHHHHHcCCee
Confidence 68999999999764 455666666666665554
No 65
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=80.43 E-value=1.8 Score=29.58 Aligned_cols=54 Identities=13% Similarity=-0.001 Sum_probs=30.3
Q ss_pred eeccCCcEEEEEc-----CHHHHHHHHhhhccCCceeEEeecC--CCCcCcceEEEEEecc
Q 045201 3 RILRPEGAVIIRD-----QADVLVKVRKIVGGMRWNTKIIDHE--DGPLVTEKILFAVKRY 56 (66)
Q Consensus 3 RILRP~G~vIiRD-----~~~vi~~v~~i~~~l~W~~~~~~~e--~~~~~~e~iLi~~K~~ 56 (66)
|.|+|||.+++.- ..+.+..+.+.+.+.--.+...... .-|.+...+++|.|++
T Consensus 193 ~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~~~ 253 (296)
T 1inl_A 193 DALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTFASKGI 253 (296)
T ss_dssp HHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEEEESSC
T ss_pred HhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEEecCCC
Confidence 6799999999973 2334444444443333344433211 1122456799999874
No 66
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=80.33 E-value=0.35 Score=31.89 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=22.6
Q ss_pred eeccCCcEEEEEcCHH----------------HHHHHHhhhccCCcee
Q 045201 3 RILRPEGAVIIRDQAD----------------VLVKVRKIVGGMRWNT 34 (66)
Q Consensus 3 RILRP~G~vIiRD~~~----------------vi~~v~~i~~~l~W~~ 34 (66)
|.|+|||.+|+.+... ..+++.+++..-..+.
T Consensus 185 r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i 232 (263)
T 2a14_A 185 SLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDI 232 (263)
T ss_dssp TTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred HHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEE
Confidence 7899999999996211 3456777776666654
No 67
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=80.24 E-value=0.32 Score=32.80 Aligned_cols=14 Identities=29% Similarity=0.686 Sum_probs=12.2
Q ss_pred eeccCCcEEEEEcC
Q 045201 3 RILRPEGAVIIRDQ 16 (66)
Q Consensus 3 RILRP~G~vIiRD~ 16 (66)
|.|+|||.+|+.|.
T Consensus 166 ~~LkpGG~lii~e~ 179 (261)
T 4gek_A 166 QGLNPGGALVLSEK 179 (261)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHcCCCcEEEEEec
Confidence 78999999999763
No 68
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=79.95 E-value=0.3 Score=31.99 Aligned_cols=13 Identities=31% Similarity=0.723 Sum_probs=11.2
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|+|||||.+++-+
T Consensus 158 rvLkPGG~l~f~~ 170 (236)
T 3orh_A 158 RLLKPGGVLTYCN 170 (236)
T ss_dssp HHEEEEEEEEECC
T ss_pred heeCCCCEEEEEe
Confidence 8999999998843
No 69
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=79.88 E-value=2.7 Score=25.06 Aligned_cols=48 Identities=21% Similarity=0.153 Sum_probs=29.6
Q ss_pred eeccCCcEEEEEcCHH-------------HHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQAD-------------VLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~~-------------vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++-+-.. ..+++++++. .|+..-...-. + ..-.|++.|+
T Consensus 100 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~-~--~~~~l~~~~~ 160 (170)
T 3i9f_A 100 RILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPT-P--YHFGLVLKRK 160 (170)
T ss_dssp HHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSS-T--TEEEEEEEEC
T ss_pred HhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCC-C--ceEEEEEecC
Confidence 7899999999985321 2456777777 77653322221 1 3456776664
No 70
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=79.74 E-value=2.4 Score=26.26 Aligned_cols=36 Identities=19% Similarity=0.282 Sum_probs=26.9
Q ss_pred ceeccCCcEEEEEc-CHHHHHHHHhhhccCCceeEEe
Q 045201 2 DRILRPEGAVIIRD-QADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 2 DRILRP~G~vIiRD-~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
-|+|+|||.+++-+ ..+-...+.+++....++....
T Consensus 146 ~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 146 DSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp GGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEE
T ss_pred HHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEe
Confidence 47899999999964 4445677888888888876433
No 71
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=79.02 E-value=1.7 Score=28.69 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=25.8
Q ss_pred eeccCCcEEEEEc-CHHHHHHHHhhhccCCceeEEe
Q 045201 3 RILRPEGAVIIRD-QADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 3 RILRP~G~vIiRD-~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
|.|+|||.+++-+ ..+-...+.+.+....++....
T Consensus 206 ~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 206 EALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp HHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEE
T ss_pred HHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEE
Confidence 6799999999864 3345677888888878876433
No 72
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=78.84 E-value=1.4 Score=28.98 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=20.1
Q ss_pred eccCCcEEEEEcCHH-----HHHHHHhhhccC--Ccee
Q 045201 4 ILRPEGAVIIRDQAD-----VLVKVRKIVGGM--RWNT 34 (66)
Q Consensus 4 ILRP~G~vIiRD~~~-----vi~~v~~i~~~l--~W~~ 34 (66)
.|+|||.+++-|... --..+.++++.. +++.
T Consensus 176 ~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 176 LLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp TCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred hCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 899999999976311 112566666666 4554
No 73
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=78.19 E-value=1.6 Score=29.05 Aligned_cols=58 Identities=9% Similarity=-0.005 Sum_probs=34.3
Q ss_pred ceeccCCcEEEEEcC---HHHHHHHHhhhccCCceeE-Eee-cCCCCcCcceEEEEEecceec
Q 045201 2 DRILRPEGAVIIRDQ---ADVLVKVRKIVGGMRWNTK-IID-HEDGPLVTEKILFAVKRYWVT 59 (66)
Q Consensus 2 DRILRP~G~vIiRD~---~~vi~~v~~i~~~l~W~~~-~~~-~e~~~~~~e~iLi~~K~~W~~ 59 (66)
-|.|+|||.+++=.. .+-+.++++.++.+.+... +.. +-.+......+++.+|.-.+|
T Consensus 171 ~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k~~~t~ 233 (249)
T 3g89_A 171 LPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTP 233 (249)
T ss_dssp GGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred HHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEeCCCCC
Confidence 378999998887554 4455566666677778753 221 122222345667777755444
No 74
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=77.88 E-value=2.1 Score=29.25 Aligned_cols=53 Identities=17% Similarity=0.293 Sum_probs=33.1
Q ss_pred eeccCCcEEEEEcCH-----HHHHHHHhhhccCCce-eEEeecCC--CCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQA-----DVLVKVRKIVGGMRWN-TKIIDHED--GPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~-----~vi~~v~~i~~~l~W~-~~~~~~e~--~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++.-.. .....+.+.++..... +......- -+.+.-.+++|.|+
T Consensus 198 ~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~~as~~ 258 (304)
T 3bwc_A 198 RILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTLVCSKK 258 (304)
T ss_dssp HHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEEEEESS
T ss_pred HhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEEEEeCC
Confidence 789999999996432 4566666666665554 33332211 11234678889886
No 75
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=77.82 E-value=3.3 Score=26.13 Aligned_cols=35 Identities=9% Similarity=0.315 Sum_probs=22.9
Q ss_pred ceeccCCcE--EEEEcCH----------HHHHHHHhhhccCCceeEEe
Q 045201 2 DRILRPEGA--VIIRDQA----------DVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 2 DRILRP~G~--vIiRD~~----------~vi~~v~~i~~~l~W~~~~~ 37 (66)
-|+|+|||. ++.-+.. -..++++.++.. .|+....
T Consensus 127 ~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~ 173 (203)
T 1pjz_A 127 EALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKV 173 (203)
T ss_dssp HHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEE
T ss_pred HHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEe
Confidence 378999998 4433321 135788888887 7876543
No 76
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=77.33 E-value=3.2 Score=28.21 Aligned_cols=52 Identities=19% Similarity=0.194 Sum_probs=33.3
Q ss_pred eeccCCcEEEEEcC--H--H-----------------------HHHHHHhhhccCCceeE-EeecCCCCc--CcceEEEE
Q 045201 3 RILRPEGAVIIRDQ--A--D-----------------------VLVKVRKIVGGMRWNTK-IIDHEDGPL--VTEKILFA 52 (66)
Q Consensus 3 RILRP~G~vIiRD~--~--~-----------------------vi~~v~~i~~~l~W~~~-~~~~e~~~~--~~e~iLi~ 52 (66)
|.|+|||+++|-|. . + ..+++++++..-.++.. +.... +.. ....++.|
T Consensus 275 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~-~~~~~~~~~~i~~ 353 (374)
T 1qzz_A 275 RALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERTSG-STTLPFDFSILEF 353 (374)
T ss_dssp HHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEEEC-CSSCSSCEEEEEE
T ss_pred HhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEECC-CCcccCCcEEEEE
Confidence 67999999998776 2 1 34567778888888753 33332 211 11278888
Q ss_pred Eec
Q 045201 53 VKR 55 (66)
Q Consensus 53 ~K~ 55 (66)
+|.
T Consensus 354 ~~~ 356 (374)
T 1qzz_A 354 TAV 356 (374)
T ss_dssp EEC
T ss_pred EEC
Confidence 885
No 77
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=77.32 E-value=0.52 Score=30.11 Aligned_cols=14 Identities=29% Similarity=0.686 Sum_probs=12.3
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++-|
T Consensus 127 ~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 127 AQSLKPGGIMLIGE 140 (256)
T ss_dssp TTSEEEEEEEEEEE
T ss_pred HHHcCCCeEEEEec
Confidence 47899999999976
No 78
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=77.06 E-value=5.6 Score=27.26 Aligned_cols=48 Identities=15% Similarity=0.222 Sum_probs=29.1
Q ss_pred eeccCCcEEEEEcCHHHHHHHHhhhccCCceeEE-eecCCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQADVLVKVRKIVGGMRWNTKI-IDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~~vi~~v~~i~~~l~W~~~~-~~~e~~~~~~e~iLi~~K 54 (66)
|.|+|||.+++-.... .-++.+.+ ..|+..- ....+|.. .-.+++++|
T Consensus 305 ~~LkpgG~l~i~t~~~--~~~~~~~~-~g~~~~~~~~l~~g~l-~~~i~vl~r 353 (354)
T 3tma_A 305 ALLPPGGRVALLTLRP--ALLKRALP-PGFALRHARVVEQGGV-YPRVFVLEK 353 (354)
T ss_dssp HTSCTTCEEEEEESCH--HHHHHHCC-TTEEEEEEEECCBTTB-CCEEEEEEE
T ss_pred HhcCCCcEEEEEeCCH--HHHHHHhh-cCcEEEEEEEEEeCCE-EEEEEEEEc
Confidence 6899999988765543 22456666 7887642 22233332 356777765
No 79
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=76.88 E-value=0.42 Score=32.30 Aligned_cols=13 Identities=23% Similarity=0.383 Sum_probs=11.0
Q ss_pred ceeccCCcEEEEE
Q 045201 2 DRILRPEGAVIIR 14 (66)
Q Consensus 2 DRILRP~G~vIiR 14 (66)
-|+|||||.+++=
T Consensus 122 ~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 122 RRVARPGAVFAAV 134 (257)
T ss_dssp HHHEEEEEEEEEE
T ss_pred HHHcCCCCEEEEE
Confidence 4899999998773
No 80
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=76.61 E-value=3.3 Score=28.01 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=32.7
Q ss_pred eeccCCcEEEEEcCHHHHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQADVLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~~vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
+.|+|||++++-=..+--+.+.+++... .+...- .+.++++++.++
T Consensus 237 ~~l~pgG~l~~e~~~~q~~~v~~~~~~~----~~~~D~---~g~~R~~~~~~k 282 (284)
T 1nv8_A 237 RYDTSGKIVLMEIGEDQVEELKKIVSDT----VFLKDS---AGKYRFLLLNRR 282 (284)
T ss_dssp HCCCTTCEEEEECCTTCHHHHTTTSTTC----EEEECT---TSSEEEEEEECC
T ss_pred hcCCCCCEEEEEECchHHHHHHHHHHhC----Ceeccc---CCCceEEEEEEc
Confidence 5689999999987777777888888765 222211 136888888775
No 81
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=75.98 E-value=0.51 Score=29.82 Aligned_cols=13 Identities=38% Similarity=0.549 Sum_probs=11.9
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|+|+|||.+++-|
T Consensus 136 ~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 136 SILKESGIFINAD 148 (234)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEE
Confidence 7899999999977
No 82
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=75.78 E-value=0.52 Score=30.42 Aligned_cols=14 Identities=29% Similarity=0.638 Sum_probs=12.0
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++.|
T Consensus 127 ~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 127 YRVLKKGGQLLLVD 140 (260)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHcCCCCEEEEEE
Confidence 37899999999974
No 83
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=75.35 E-value=0.54 Score=31.10 Aligned_cols=32 Identities=19% Similarity=0.316 Sum_probs=23.2
Q ss_pred eeccCCcEEEEEcC----------------HHHHHHHHhhhccCCcee
Q 045201 3 RILRPEGAVIIRDQ----------------ADVLVKVRKIVGGMRWNT 34 (66)
Q Consensus 3 RILRP~G~vIiRD~----------------~~vi~~v~~i~~~l~W~~ 34 (66)
|+|+|||.+++.+. .-..+++.+++..-.++.
T Consensus 203 r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 250 (289)
T 2g72_A 203 TLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKV 250 (289)
T ss_dssp TTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred HhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeE
Confidence 78999999998631 113567778887777764
No 84
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=75.28 E-value=1.2 Score=28.94 Aligned_cols=31 Identities=19% Similarity=0.139 Sum_probs=22.3
Q ss_pred ceeccCCcEEEEE-cCHHHHHHHHhhhccCCc
Q 045201 2 DRILRPEGAVIIR-DQADVLVKVRKIVGGMRW 32 (66)
Q Consensus 2 DRILRP~G~vIiR-D~~~vi~~v~~i~~~l~W 32 (66)
-|+|+|||.+++. |..+..+.+.+.+..-.+
T Consensus 160 ~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 160 AYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp HHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred HHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 3789999999884 777777777766555443
No 85
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=74.93 E-value=1.1 Score=29.68 Aligned_cols=15 Identities=7% Similarity=0.268 Sum_probs=12.6
Q ss_pred ceeccCCcEEEEEcC
Q 045201 2 DRILRPEGAVIIRDQ 16 (66)
Q Consensus 2 DRILRP~G~vIiRD~ 16 (66)
-|+|+|||.++|.+-
T Consensus 170 ~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 170 YNLTPDDGRMLLHTI 184 (302)
T ss_dssp HHSSCTTCEEEEEEE
T ss_pred HHhcCCCcEEEEEEE
Confidence 378999999999764
No 86
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=74.93 E-value=1 Score=28.71 Aligned_cols=13 Identities=23% Similarity=0.450 Sum_probs=11.3
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|+|+|||.++|-|
T Consensus 151 ~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 151 ILLGKQGAMYLIE 163 (245)
T ss_dssp HHHTTTCEEEEEE
T ss_pred HHcCCCCEEEEEe
Confidence 7899999988876
No 87
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=74.89 E-value=3.7 Score=25.93 Aligned_cols=33 Identities=12% Similarity=0.274 Sum_probs=25.3
Q ss_pred eeccCCcEEEEEcCH-----------HHHHHHHhhhccCCceeE
Q 045201 3 RILRPEGAVIIRDQA-----------DVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD~~-----------~vi~~v~~i~~~l~W~~~ 35 (66)
|.|+|||.+++-+-. -..+++.+++..-.|+..
T Consensus 159 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 202 (235)
T 3lcc_A 159 ELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAV 202 (235)
T ss_dssp HHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEE
T ss_pred HHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEE
Confidence 689999999985432 135788889988889864
No 88
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=74.80 E-value=0.64 Score=29.71 Aligned_cols=34 Identities=9% Similarity=0.245 Sum_probs=23.5
Q ss_pred ceeccCCcEEEEEcCH---------------------HHHHHHHhhhccCCceeE
Q 045201 2 DRILRPEGAVIIRDQA---------------------DVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 2 DRILRP~G~vIiRD~~---------------------~vi~~v~~i~~~l~W~~~ 35 (66)
-|+|+|||.+++-+-. ....++.+++..-.++..
T Consensus 137 ~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 191 (257)
T 3f4k_A 137 SKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPT 191 (257)
T ss_dssp HTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEE
T ss_pred HHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEE
Confidence 3789999999998721 124566677777777643
No 89
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=74.32 E-value=1.1 Score=29.29 Aligned_cols=14 Identities=21% Similarity=0.679 Sum_probs=12.0
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++.+
T Consensus 155 ~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 155 HRLLPADGVMLLHT 168 (287)
T ss_dssp HHHSCTTCEEEEEE
T ss_pred HHhcCCCCEEEEEE
Confidence 37899999999966
No 90
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=74.18 E-value=0.67 Score=28.94 Aligned_cols=13 Identities=15% Similarity=0.166 Sum_probs=12.0
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|+|+|||.++|-+
T Consensus 129 ~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 129 DWLAEGGRLFLVC 141 (250)
T ss_dssp TTEEEEEEEEEEE
T ss_pred HhcCCCCEEEEEc
Confidence 8999999999976
No 91
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=73.92 E-value=1.1 Score=28.57 Aligned_cols=50 Identities=16% Similarity=0.167 Sum_probs=31.4
Q ss_pred eeccCCcEEEEEcC-----HHHHHHHHhhhccCCceeEEeec-CCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQ-----ADVLVKVRKIVGGMRWNTKIIDH-EDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~-----~~vi~~v~~i~~~l~W~~~~~~~-e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++-|- .++++.+++ .=++++....+ .+.....+.+.++.++
T Consensus 158 ~~LkpgG~lv~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 158 GLLRKGTVLLADNVIVPGTPDFLAYVRG---SSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp TCCCTTCEEEESCCCCCCCHHHHHHHHH---CTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred cccCCCeEEEEeCCCCcchHHHHHHHhh---CCCceEEEcccccccCCCCCceEEEEEe
Confidence 78999999998764 456555554 33576655432 1111235788888875
No 92
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=73.76 E-value=0.63 Score=29.61 Aligned_cols=14 Identities=36% Similarity=0.776 Sum_probs=12.4
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++-+
T Consensus 146 ~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 146 YKWLKPTGTLLITD 159 (266)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHcCCCCEEEEEE
Confidence 37899999999987
No 93
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=73.30 E-value=3.3 Score=26.15 Aligned_cols=30 Identities=13% Similarity=0.145 Sum_probs=22.7
Q ss_pred eeccCCcEEEEEcC-HHHHHHHHhhhccCCce
Q 045201 3 RILRPEGAVIIRDQ-ADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILRP~G~vIiRD~-~~vi~~v~~i~~~l~W~ 33 (66)
|.|+|||.+++-.. .+-+.++...+... |.
T Consensus 178 ~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~ 208 (248)
T 2yvl_A 178 KSLMEGAPVGFLLPTANQVIKLLESIENY-FG 208 (248)
T ss_dssp HHBCTTCEEEEEESSHHHHHHHHHHSTTT-EE
T ss_pred HHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CC
Confidence 67999999998877 55677777776665 54
No 94
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=72.87 E-value=2.5 Score=29.05 Aligned_cols=54 Identities=17% Similarity=0.200 Sum_probs=30.2
Q ss_pred eeccCCcEEEEEc------CHHHHHHHHhhhccCCceeEEeecC-CCCcCcceEEEEEecc
Q 045201 3 RILRPEGAVIIRD------QADVLVKVRKIVGGMRWNTKIIDHE-DGPLVTEKILFAVKRY 56 (66)
Q Consensus 3 RILRP~G~vIiRD------~~~vi~~v~~i~~~l~W~~~~~~~e-~~~~~~e~iLi~~K~~ 56 (66)
|.|+|||.+++.- ..+.+..+.+.++..--.+...... ....+...+++|.|++
T Consensus 183 ~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~~~~~as~~~ 243 (314)
T 1uir_A 183 AHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASDAF 243 (314)
T ss_dssp HTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEEEEEEEESSS
T ss_pred HhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCCCCeEEEEEEECCC
Confidence 7899999999872 2345566665555543333322110 0001245688898873
No 95
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=72.57 E-value=5.4 Score=24.41 Aligned_cols=46 Identities=13% Similarity=0.093 Sum_probs=31.8
Q ss_pred CCcEEEEEc-CHHHHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEe
Q 045201 7 PEGAVIIRD-QADVLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 7 P~G~vIiRD-~~~vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K 54 (66)
|||.+++-. ...-..++.+++....|+.........+ .|++++.+.
T Consensus 115 pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~--~e~~~~~~~ 161 (170)
T 3q87_B 115 TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKIL--GETVYIIKG 161 (170)
T ss_dssp CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECS--SSEEEEEEE
T ss_pred CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccC--CceEEEEEE
Confidence 999999865 4466788899999999987544333322 466666543
No 96
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=72.01 E-value=0.73 Score=30.18 Aligned_cols=11 Identities=9% Similarity=0.157 Sum_probs=10.5
Q ss_pred eeccCCcEEEE
Q 045201 3 RILRPEGAVII 13 (66)
Q Consensus 3 RILRP~G~vIi 13 (66)
|+|+|||.++|
T Consensus 127 r~LkpGG~l~i 137 (225)
T 3p2e_A 127 DLAKKEAHFEF 137 (225)
T ss_dssp TTEEEEEEEEE
T ss_pred HhcCCCcEEEE
Confidence 78999999999
No 97
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=71.85 E-value=9.6 Score=25.61 Aligned_cols=53 Identities=17% Similarity=0.173 Sum_probs=28.7
Q ss_pred eeccCCcEEEEEc-----CHHHHHHHHhhhccCCceeEEeecCCCC-cCcceEEEEEecc
Q 045201 3 RILRPEGAVIIRD-----QADVLVKVRKIVGGMRWNTKIIDHEDGP-LVTEKILFAVKRY 56 (66)
Q Consensus 3 RILRP~G~vIiRD-----~~~vi~~v~~i~~~l~W~~~~~~~e~~~-~~~e~iLi~~K~~ 56 (66)
|.|+|||.+++.- ..+.+..+.+.+++.--.+... ...-| .+...+++|.|.+
T Consensus 159 ~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~-~~~vP~~g~~~~~~as~~~ 217 (262)
T 2cmg_A 159 RMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPF-VAPLRILSNKGYIYASFKT 217 (262)
T ss_dssp TTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEE-CCTTCTTCCEEEEEEESSC
T ss_pred HhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEE-EEccCCCcccEEEEeeCCC
Confidence 6899999999963 2233444444444432233332 22222 2235578898863
No 98
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=71.47 E-value=0.72 Score=30.66 Aligned_cols=13 Identities=15% Similarity=0.337 Sum_probs=11.3
Q ss_pred ceeccCCcEEEEE
Q 045201 2 DRILRPEGAVIIR 14 (66)
Q Consensus 2 DRILRP~G~vIiR 14 (66)
-|+|+|||.++|-
T Consensus 159 ~r~LkpgG~l~i~ 171 (292)
T 2aot_A 159 HSLLGTNAKMLII 171 (292)
T ss_dssp HHTEEEEEEEEEE
T ss_pred HHHcCCCcEEEEE
Confidence 4889999999985
No 99
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=71.41 E-value=0.77 Score=29.16 Aligned_cols=34 Identities=9% Similarity=0.284 Sum_probs=23.6
Q ss_pred ceeccCCcEEEEEcCH----------------HHHHHHHhhhccCCceeE
Q 045201 2 DRILRPEGAVIIRDQA----------------DVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 2 DRILRP~G~vIiRD~~----------------~vi~~v~~i~~~l~W~~~ 35 (66)
-|.|+|||.++|-+.. -..+++++++..-.++..
T Consensus 184 ~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 233 (254)
T 1xtp_A 184 QQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVV 233 (254)
T ss_dssp HHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEE
T ss_pred HHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEE
Confidence 4789999999998731 123666777776677643
No 100
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=71.25 E-value=1.1 Score=28.52 Aligned_cols=14 Identities=7% Similarity=0.164 Sum_probs=12.1
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++..
T Consensus 127 ~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 127 YSKMKYSSYIVIES 140 (240)
T ss_dssp HHHBCTTCCEEEEE
T ss_pred HHHcCCCcEEEEEe
Confidence 37899999999975
No 101
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=71.20 E-value=1.5 Score=27.02 Aligned_cols=32 Identities=19% Similarity=0.169 Sum_probs=22.6
Q ss_pred ceeccCCcEEEEEcC-----------------HHHHHHHHhhhccCCceeE
Q 045201 2 DRILRPEGAVIIRDQ-----------------ADVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 2 DRILRP~G~vIiRD~-----------------~~vi~~v~~i~~~l~W~~~ 35 (66)
-|+|+|||.+++-+- .-..+++++++. .|++.
T Consensus 118 ~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~ 166 (202)
T 2kw5_A 118 YQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWL 166 (202)
T ss_dssp HTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEE
T ss_pred HHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEE
Confidence 378999999999852 124567777777 67653
No 102
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=71.10 E-value=2.8 Score=28.86 Aligned_cols=54 Identities=11% Similarity=0.089 Sum_probs=29.5
Q ss_pred eeccCCcEEEEEc-----CHHHHHHHHhhhccCCceeEEeec--CCCCcCcceEEEEEecc
Q 045201 3 RILRPEGAVIIRD-----QADVLVKVRKIVGGMRWNTKIIDH--EDGPLVTEKILFAVKRY 56 (66)
Q Consensus 3 RILRP~G~vIiRD-----~~~vi~~v~~i~~~l~W~~~~~~~--e~~~~~~e~iLi~~K~~ 56 (66)
|.|+|||.+++.- ..+.+..+.+.+++.--.+..... ..-|.+.-.+++|.|..
T Consensus 186 ~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~~~ 246 (294)
T 3adn_A 186 RCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDND 246 (294)
T ss_dssp HTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEEEEESCT
T ss_pred HhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEEEEeCCc
Confidence 6899999999963 223344444333333223332221 12222346788998865
No 103
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=71.03 E-value=0.94 Score=29.38 Aligned_cols=33 Identities=9% Similarity=0.177 Sum_probs=23.4
Q ss_pred ceeccCCcEEEEEcCH---------------------HHHHHHHhhhccCCcee
Q 045201 2 DRILRPEGAVIIRDQA---------------------DVLVKVRKIVGGMRWNT 34 (66)
Q Consensus 2 DRILRP~G~vIiRD~~---------------------~vi~~v~~i~~~l~W~~ 34 (66)
-|+|+|||.+++-+-. ....++.+++..-.++.
T Consensus 137 ~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 190 (267)
T 3kkz_A 137 RKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLP 190 (267)
T ss_dssp GGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEE
T ss_pred HHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEE
Confidence 4789999999998631 13456667777777764
No 104
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=70.85 E-value=8.6 Score=25.27 Aligned_cols=31 Identities=10% Similarity=0.256 Sum_probs=24.5
Q ss_pred eeccCCcEEEEEcCHHHHHHHHhhhccCCcee
Q 045201 3 RILRPEGAVIIRDQADVLVKVRKIVGGMRWNT 34 (66)
Q Consensus 3 RILRP~G~vIiRD~~~vi~~v~~i~~~l~W~~ 34 (66)
|+|+|+|.+++=-..+-+.++.+.+..- |..
T Consensus 158 ~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 158 AIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp HHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred HHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 6799999998877777778888888774 763
No 105
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=70.72 E-value=0.82 Score=30.06 Aligned_cols=14 Identities=43% Similarity=0.909 Sum_probs=12.3
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++-+
T Consensus 174 ~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 174 ARVLKPRGVMAITD 187 (297)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHcCCCeEEEEEE
Confidence 37899999999986
No 106
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=70.54 E-value=0.83 Score=29.63 Aligned_cols=14 Identities=21% Similarity=0.783 Sum_probs=12.2
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||++++.+
T Consensus 129 ~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 129 KKVLKPGGTITVIE 142 (276)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHcCCCcEEEEEE
Confidence 37899999999976
No 107
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=70.49 E-value=0.83 Score=28.15 Aligned_cols=14 Identities=36% Similarity=0.570 Sum_probs=12.2
Q ss_pred eeccCCcEEEEEcC
Q 045201 3 RILRPEGAVIIRDQ 16 (66)
Q Consensus 3 RILRP~G~vIiRD~ 16 (66)
|+|+|||.+++.+-
T Consensus 116 ~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 116 RVLKPGGLACINFL 129 (209)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHcCCCcEEEEEEe
Confidence 78999999999763
No 108
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=70.32 E-value=0.85 Score=29.16 Aligned_cols=33 Identities=30% Similarity=0.460 Sum_probs=24.8
Q ss_pred eeccCCcEEEEEcCH---------------HHHHHHHhhhccCCceeE
Q 045201 3 RILRPEGAVIIRDQA---------------DVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD~~---------------~vi~~v~~i~~~l~W~~~ 35 (66)
|+|+|||.++|.|.. ...+++.+++....++..
T Consensus 173 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 220 (241)
T 2ex4_A 173 GSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLL 220 (241)
T ss_dssp HHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEE
T ss_pred HhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEE
Confidence 789999999996631 136778888888888754
No 109
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=70.30 E-value=4 Score=25.86 Aligned_cols=13 Identities=23% Similarity=0.675 Sum_probs=11.4
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|+|||.+++-|
T Consensus 148 ~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 148 PMVRPGGLILSDN 160 (233)
T ss_dssp GGEEEEEEEEEET
T ss_pred HHcCCCeEEEEEc
Confidence 6899999999964
No 110
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=69.53 E-value=1.7 Score=29.78 Aligned_cols=33 Identities=12% Similarity=0.292 Sum_probs=23.2
Q ss_pred eeccCCcEEEEEcCH-------------------------HHHHHHHhhhccCCceeE
Q 045201 3 RILRPEGAVIIRDQA-------------------------DVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD~~-------------------------~vi~~v~~i~~~l~W~~~ 35 (66)
|.|+|||.++|-|.. -..++.++++..-.++..
T Consensus 274 ~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 331 (348)
T 3lst_A 274 RVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLD 331 (348)
T ss_dssp HTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEE
T ss_pred HhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceE
Confidence 689999999997631 024566777777777653
No 111
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=69.28 E-value=1 Score=29.08 Aligned_cols=13 Identities=62% Similarity=1.055 Sum_probs=11.9
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|+|+|||.++|.+
T Consensus 154 ~~L~pgG~l~i~~ 166 (273)
T 3bus_A 154 RVLRPGGTVAIAD 166 (273)
T ss_dssp TTEEEEEEEEEEE
T ss_pred HHcCCCeEEEEEE
Confidence 7899999999987
No 112
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=69.21 E-value=4.6 Score=27.73 Aligned_cols=53 Identities=11% Similarity=0.134 Sum_probs=28.4
Q ss_pred eeccCCcEEEEEc-----CHHHHHHHHhhhccCCceeEEee--cCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRD-----QADVLVKVRKIVGGMRWNTKIID--HEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD-----~~~vi~~v~~i~~~l~W~~~~~~--~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++.. ..+.+..+.+.++.+-=.+.... ...-+.+.-.+++|.|.
T Consensus 197 ~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~~as~~ 256 (304)
T 2o07_A 197 TALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKN 256 (304)
T ss_dssp HHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred hccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceEEEEEeCC
Confidence 6899999999976 23344555444433322333221 11111123468888886
No 113
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=69.15 E-value=0.93 Score=29.09 Aligned_cols=14 Identities=29% Similarity=0.741 Sum_probs=12.1
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++-|
T Consensus 111 ~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 111 ARVLKQDGRFLLVD 124 (239)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHcCCCcEEEEEE
Confidence 37899999999975
No 114
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=69.03 E-value=7.7 Score=26.81 Aligned_cols=54 Identities=13% Similarity=0.104 Sum_probs=31.4
Q ss_pred eeccCCcEEEEEc-----CHHHHHHHHhhhccCCceeEEeecC--CCCcCcceEEEEEecc
Q 045201 3 RILRPEGAVIIRD-----QADVLVKVRKIVGGMRWNTKIIDHE--DGPLVTEKILFAVKRY 56 (66)
Q Consensus 3 RILRP~G~vIiRD-----~~~vi~~v~~i~~~l~W~~~~~~~e--~~~~~~e~iLi~~K~~ 56 (66)
|.|+|||.+++.- ..+.+.++.+.++..--.+...... .-+.+.-.+++|.|++
T Consensus 218 ~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~as~~~ 278 (321)
T 2pt6_A 218 NALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKTD 278 (321)
T ss_dssp HHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEEESST
T ss_pred HhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEEeeCCC
Confidence 6899999999963 2345555555555544444433211 1111234588898875
No 115
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=68.56 E-value=1.8 Score=28.88 Aligned_cols=14 Identities=14% Similarity=0.401 Sum_probs=12.0
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++-+
T Consensus 181 ~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 181 FNIMPADGRMTVQS 194 (318)
T ss_dssp HHHSCTTCEEEEEE
T ss_pred HHhcCCCcEEEEEE
Confidence 37899999999865
No 116
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=68.44 E-value=0.87 Score=29.17 Aligned_cols=16 Identities=25% Similarity=0.474 Sum_probs=12.8
Q ss_pred ceeccCCcEEEEEcCH
Q 045201 2 DRILRPEGAVIIRDQA 17 (66)
Q Consensus 2 DRILRP~G~vIiRD~~ 17 (66)
-|+|+|||.+++-+-.
T Consensus 157 ~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 157 FRLLKPGGVLTYCNLT 172 (236)
T ss_dssp HHHEEEEEEEEECCHH
T ss_pred HHhcCCCeEEEEEecC
Confidence 3789999999987643
No 117
>2y9k_A Protein INVG; protein transport, type III secretion system, outer membrane secretin family, C15 fold; 8.30A {Salmonella enterica subsp}
Probab=68.02 E-value=4.1 Score=25.15 Aligned_cols=25 Identities=12% Similarity=0.069 Sum_probs=21.8
Q ss_pred cCCcEEEEEcCHHHHHHHHhhhccC
Q 045201 6 RPEGAVIIRDQADVLVKVRKIVGGM 30 (66)
Q Consensus 6 RP~G~vIiRD~~~vi~~v~~i~~~l 30 (66)
-+.+.++|+|.+..++.|+++++.|
T Consensus 109 ~~tn~l~v~g~~~~v~~v~~~i~~l 133 (137)
T 2y9k_A 109 NRKGTFYVSGPPVYVDMVVNAATMM 133 (137)
T ss_dssp SSTTEEEEEECHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHh
Confidence 3578999999999999999998754
No 118
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=68.00 E-value=2.3 Score=29.07 Aligned_cols=52 Identities=15% Similarity=0.063 Sum_probs=25.4
Q ss_pred ceeccCCc--EEEEE----cCHHHHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEe
Q 045201 2 DRILRPEG--AVIIR----DQADVLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 2 DRILRP~G--~vIiR----D~~~vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K 54 (66)
.|+|+||| .+++. +..++++.++.+...+. .+.+...-.-....|..++|..
T Consensus 178 ~r~LkpGG~~~~v~~~~~~~~~~~~~~l~~l~~~f~-~v~v~P~~sR~~s~E~y~v~~~ 235 (276)
T 2wa2_A 178 SRWLEYNQGCGFCVKVLNPYSCDVLEALMKMQARFG-GGLIRVPLSRNSTHEMYFVSGI 235 (276)
T ss_dssp HHHHHHSTTCEEEEEESCCCSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESSC
T ss_pred HHHhccCCCcEEEEEeCCCCchhHHHHHHHHHHHcC-CEEEEcCCCCCcchheEEeccc
Confidence 37899999 88874 44534444444332211 1222211111123577777653
No 119
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=67.91 E-value=1 Score=27.76 Aligned_cols=14 Identities=29% Similarity=0.396 Sum_probs=12.2
Q ss_pred eeccCCcEEEEEcC
Q 045201 3 RILRPEGAVIIRDQ 16 (66)
Q Consensus 3 RILRP~G~vIiRD~ 16 (66)
|+|+|||.+++-+.
T Consensus 134 ~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 134 SAVAPGGVVEFVDV 147 (218)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHcCCCeEEEEEeC
Confidence 78999999999864
No 120
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=67.48 E-value=4.8 Score=26.78 Aligned_cols=50 Identities=14% Similarity=0.208 Sum_probs=30.2
Q ss_pred eeccCCcEEEEEcCHH---------------------------HHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQAD---------------------------VLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~~---------------------------vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||+++|-|-.. ..+++++++..-.++..-...-.+ ...+++++++
T Consensus 259 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~~~~---~~~~i~~~~~ 335 (335)
T 2r3s_A 259 TALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHSLPT---TQQQVIVAYK 335 (335)
T ss_dssp HHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEECCTT---SSSEEEEEEC
T ss_pred HhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEECCC---CceeEEEecC
Confidence 6799999999865320 155677777777776432222222 2457777653
No 121
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=66.77 E-value=3 Score=26.53 Aligned_cols=31 Identities=6% Similarity=0.123 Sum_probs=23.0
Q ss_pred eeccCCcEEEEEcCHH-HHHHHHhhhccCCce
Q 045201 3 RILRPEGAVIIRDQAD-VLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILRP~G~vIiRD~~~-vi~~v~~i~~~l~W~ 33 (66)
|.|+|||.+++-.... -+.++.+.+....|.
T Consensus 186 ~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 186 LALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp HHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred HhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 6899999999877653 666666667666664
No 122
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=66.18 E-value=2.4 Score=26.08 Aligned_cols=15 Identities=7% Similarity=0.116 Sum_probs=12.4
Q ss_pred eeccCCcEEEEEcCH
Q 045201 3 RILRPEGAVIIRDQA 17 (66)
Q Consensus 3 RILRP~G~vIiRD~~ 17 (66)
|+|+|||.+++....
T Consensus 141 ~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 141 GWTREGTVAVVERAT 155 (189)
T ss_dssp SSCCTTCEEEEEEET
T ss_pred CccCCCeEEEEEecC
Confidence 489999999997653
No 123
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=66.14 E-value=1.2 Score=29.42 Aligned_cols=15 Identities=13% Similarity=0.282 Sum_probs=13.1
Q ss_pred eeccCCcEEEEEcCH
Q 045201 3 RILRPEGAVIIRDQA 17 (66)
Q Consensus 3 RILRP~G~vIiRD~~ 17 (66)
|.|+|||++++-+..
T Consensus 114 ~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 114 HSVKKGGKIICFEPH 128 (284)
T ss_dssp HTEEEEEEEEEEECC
T ss_pred HHcCCCCEEEEEecc
Confidence 789999999988765
No 124
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=66.05 E-value=8.9 Score=25.40 Aligned_cols=53 Identities=21% Similarity=0.116 Sum_probs=28.9
Q ss_pred ceeccCCcEEEEE-cCHHHHHHHHhhhccCCce--eEEeecC-CCC--------cCcceEEEEEec
Q 045201 2 DRILRPEGAVIIR-DQADVLVKVRKIVGGMRWN--TKIIDHE-DGP--------LVTEKILFAVKR 55 (66)
Q Consensus 2 DRILRP~G~vIiR-D~~~vi~~v~~i~~~l~W~--~~~~~~e-~~~--------~~~e~iLi~~K~ 55 (66)
-|+|+|+|.++|- |+.... .+..++....|. ..+.=.. .+. ...|-||+..|.
T Consensus 61 ~~~Lk~~g~i~v~~~d~~~~-~~~~~~~~~gf~~~~~iiW~K~~~~~~~~~~~~~~hE~Il~~~K~ 125 (260)
T 1g60_A 61 LDKLDKDGSLYIFNTPFNCA-FICQYLVSKGMIFQNWITWDKRDGMGSAKRRFSTGQETILFFSKS 125 (260)
T ss_dssp HHHEEEEEEEEEEECHHHHH-HHHHHHHHTTCEEEEEEEECCCCSCCCCSSSCBCCCEEEEEEESS
T ss_pred HHHhcCCeEEEEEcCcHHHH-HHHHHHHhhccceeEEEEEEecCCCccccCccccCCcEEEEEEeC
Confidence 3789999999888 655443 333333333333 2222111 111 135889999885
No 125
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=65.95 E-value=12 Score=22.02 Aligned_cols=31 Identities=6% Similarity=0.093 Sum_probs=26.7
Q ss_pred CCcEEEEEc-CHHHHHHHHhhhccCCceeEEe
Q 045201 7 PEGAVIIRD-QADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 7 P~G~vIiRD-~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
|||.+++-+ ..+-+.++.+.++...|++...
T Consensus 123 ~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 123 KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 999999987 7888889999999888987654
No 126
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=65.76 E-value=1.1 Score=28.08 Aligned_cols=34 Identities=12% Similarity=0.191 Sum_probs=23.4
Q ss_pred ceeccCCcEEEEEc------------------CHH-HHHHHHhhhccCCceeE
Q 045201 2 DRILRPEGAVIIRD------------------QAD-VLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 2 DRILRP~G~vIiRD------------------~~~-vi~~v~~i~~~l~W~~~ 35 (66)
-|.|+|||.+++.. +.+ +.+.++.++..-.|++.
T Consensus 127 ~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~ 179 (218)
T 3mq2_A 127 AAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLA 179 (218)
T ss_dssp HHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEE
T ss_pred HHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCce
Confidence 37899999999942 122 23447778888888754
No 127
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=65.64 E-value=2.1 Score=28.92 Aligned_cols=48 Identities=8% Similarity=0.086 Sum_probs=30.0
Q ss_pred eeccCCcEEEEEcCH----------------------HHHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQA----------------------DVLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~----------------------~vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K 54 (66)
|.|+|||+++|-|.. -..++.++++..-.++..-.....+ ..++.|+|
T Consensus 262 ~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~----~~vie~r~ 331 (332)
T 3i53_A 262 EAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPISY----VSIVEMTA 331 (332)
T ss_dssp HHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEECSS----SEEEEEEE
T ss_pred HhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEECCC----cEEEEEee
Confidence 679999999997741 1145677777777776532222211 55777765
No 128
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=65.37 E-value=1.2 Score=27.57 Aligned_cols=14 Identities=43% Similarity=0.859 Sum_probs=12.1
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++-+
T Consensus 119 ~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 119 RRVLRPGGALVVGV 132 (211)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHcCCCCEEEEEe
Confidence 37899999999975
No 129
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=65.33 E-value=1.1 Score=27.89 Aligned_cols=33 Identities=18% Similarity=0.258 Sum_probs=23.9
Q ss_pred eeccCCcEEEEEcCH---------------HHHHHHHhhhccCC-ceeE
Q 045201 3 RILRPEGAVIIRDQA---------------DVLVKVRKIVGGMR-WNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD~~---------------~vi~~v~~i~~~l~-W~~~ 35 (66)
|+|+|||.+++-... -..+++.+++..-. ++..
T Consensus 129 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 129 RALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp HHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred HhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEE
Confidence 789999999997332 14567777887777 7643
No 130
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=65.22 E-value=1.3 Score=26.67 Aligned_cols=16 Identities=13% Similarity=0.358 Sum_probs=12.8
Q ss_pred ceeccCCcEEEEEcCH
Q 045201 2 DRILRPEGAVIIRDQA 17 (66)
Q Consensus 2 DRILRP~G~vIiRD~~ 17 (66)
-|+|+|||.+++-...
T Consensus 141 ~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 141 RQLLTNEAVIVCETDK 156 (187)
T ss_dssp TTCEEEEEEEEEEEET
T ss_pred hcccCCCCEEEEEeCC
Confidence 3789999999987544
No 131
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=65.07 E-value=7 Score=27.12 Aligned_cols=53 Identities=9% Similarity=0.082 Sum_probs=28.4
Q ss_pred eeccCCcEEEEEc-----CHHHHHHHHhhhccCCceeEEeec--CCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRD-----QADVLVKVRKIVGGMRWNTKIIDH--EDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD-----~~~vi~~v~~i~~~l~W~~~~~~~--e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.+++.. ..+.+..+.+.++.+-=++..... ..-+.+.-.+++|.|.
T Consensus 210 ~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 210 DALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp HHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred hhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEEEEEeCC
Confidence 6899999999974 223444444444443223433221 1111122268888886
No 132
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=65.03 E-value=1.3 Score=28.95 Aligned_cols=15 Identities=27% Similarity=0.330 Sum_probs=12.6
Q ss_pred ceeccCCcEEEEEcC
Q 045201 2 DRILRPEGAVIIRDQ 16 (66)
Q Consensus 2 DRILRP~G~vIiRD~ 16 (66)
-|+|+|||.++|-+-
T Consensus 160 ~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 160 WSVLRPGGVLSLMFY 174 (285)
T ss_dssp HHTEEEEEEEEEEEE
T ss_pred HHHcCCCeEEEEEEe
Confidence 378999999999763
No 133
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=64.92 E-value=12 Score=25.15 Aligned_cols=53 Identities=11% Similarity=0.080 Sum_probs=28.5
Q ss_pred eeccCCcEEEEEcC-----HHHHHHHHhhhccCCceeEEeecCCCCc--CcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQ-----ADVLVKVRKIVGGMRWNTKIIDHEDGPL--VTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~-----~~vi~~v~~i~~~l~W~~~~~~~e~~~~--~~e~iLi~~K~ 55 (66)
|.|+|||.+++.-. .+.+..+.+.+++.=-.+......-..+ +.-.+++|.|.
T Consensus 180 ~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~~~s~~ 239 (283)
T 2i7c_A 180 NALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKT 239 (283)
T ss_dssp HHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEEEEeCC
Confidence 68999999999832 3444444444444322343322211111 22367888876
No 134
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=64.32 E-value=4.4 Score=27.46 Aligned_cols=53 Identities=11% Similarity=0.166 Sum_probs=32.1
Q ss_pred eeccCCcEEEEEcCH--------H------------------HHHHHHhhhccCCceeE-EeecCCCC-cCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQA--------D------------------VLVKVRKIVGGMRWNTK-IIDHEDGP-LVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~--------~------------------vi~~v~~i~~~l~W~~~-~~~~e~~~-~~~e~iLi~~K 54 (66)
|.|+|||.++|-|.. . ..+++++++..-.++.. +....... .....++.|+|
T Consensus 276 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 276 EALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp HTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred HhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 679999999987643 1 23566777777778753 32222110 01156888887
Q ss_pred c
Q 045201 55 R 55 (66)
Q Consensus 55 ~ 55 (66)
.
T Consensus 356 ~ 356 (360)
T 1tw3_A 356 A 356 (360)
T ss_dssp C
T ss_pred C
Confidence 4
No 135
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=64.26 E-value=1.3 Score=29.62 Aligned_cols=13 Identities=38% Similarity=0.800 Sum_probs=11.5
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|+|||.+|+..
T Consensus 208 ~~LkpGG~lil~~ 220 (292)
T 3g07_A 208 RHLRPGGILVLEP 220 (292)
T ss_dssp HHEEEEEEEEEEC
T ss_pred HHhCCCcEEEEec
Confidence 7899999999964
No 136
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=64.25 E-value=1.3 Score=27.84 Aligned_cols=33 Identities=15% Similarity=0.240 Sum_probs=23.1
Q ss_pred ceeccCCcEEEEEcCH----------------------HHHHHHHhhhccCCcee
Q 045201 2 DRILRPEGAVIIRDQA----------------------DVLVKVRKIVGGMRWNT 34 (66)
Q Consensus 2 DRILRP~G~vIiRD~~----------------------~vi~~v~~i~~~l~W~~ 34 (66)
-|+|+|||.++|-+.. -...+++.++..-.++.
T Consensus 140 ~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 140 KRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp HHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred HHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEE
Confidence 3789999999997621 12246777777777764
No 137
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=64.25 E-value=1.2 Score=30.59 Aligned_cols=14 Identities=21% Similarity=0.385 Sum_probs=11.9
Q ss_pred eeccCCcEEEEEcC
Q 045201 3 RILRPEGAVIIRDQ 16 (66)
Q Consensus 3 RILRP~G~vIiRD~ 16 (66)
|.|+|||.+|+-.-
T Consensus 157 r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 157 ELTASGGKVLITTM 170 (302)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHcCCCCEEEEEeC
Confidence 78999999998653
No 138
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=64.22 E-value=1.2 Score=27.65 Aligned_cols=14 Identities=21% Similarity=0.565 Sum_probs=11.8
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++-+
T Consensus 141 ~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 141 VKMLAPGGHLVFGS 154 (216)
T ss_dssp HHTEEEEEEEEEEE
T ss_pred HHHcCCCCEEEEEe
Confidence 37899999999954
No 139
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=64.19 E-value=2.4 Score=28.51 Aligned_cols=15 Identities=13% Similarity=0.255 Sum_probs=12.8
Q ss_pred eeccCCcEEEEEcCH
Q 045201 3 RILRPEGAVIIRDQA 17 (66)
Q Consensus 3 RILRP~G~vIiRD~~ 17 (66)
|.|+|||+++|-+-.
T Consensus 184 ~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 184 DALAPGSYLFMTSLV 198 (274)
T ss_dssp HHSCTTCEEEEEEEB
T ss_pred HhCCCCcEEEEEEec
Confidence 679999999998754
No 140
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=64.13 E-value=1.2 Score=29.16 Aligned_cols=13 Identities=15% Similarity=0.291 Sum_probs=11.4
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|+|+|||++++-.
T Consensus 142 ~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 142 QALKSGGRFVAEF 154 (279)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEe
Confidence 7899999999964
No 141
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=63.99 E-value=1.4 Score=27.99 Aligned_cols=14 Identities=14% Similarity=0.195 Sum_probs=12.3
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++-.
T Consensus 119 ~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 119 MDQLESGGVLAVQM 132 (259)
T ss_dssp GGGEEEEEEEEEEE
T ss_pred HHhcCCCeEEEEEe
Confidence 48899999999975
No 142
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=63.95 E-value=1.2 Score=28.32 Aligned_cols=13 Identities=38% Similarity=0.703 Sum_probs=11.1
Q ss_pred ceeccCCcEEEEE
Q 045201 2 DRILRPEGAVIIR 14 (66)
Q Consensus 2 DRILRP~G~vIiR 14 (66)
-|+|+|||.+++-
T Consensus 128 ~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 128 IRVLKPGGALLEG 140 (263)
T ss_dssp HHHEEEEEEEEEE
T ss_pred HHHCCCCcEEEEE
Confidence 3789999999985
No 143
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=63.81 E-value=1.2 Score=28.46 Aligned_cols=13 Identities=23% Similarity=0.304 Sum_probs=11.5
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|+|+|||.+++-.
T Consensus 133 ~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 133 INLKSSGSFIFSV 145 (253)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HHcCCCcEEEEEe
Confidence 7899999999963
No 144
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=63.79 E-value=1.4 Score=27.81 Aligned_cols=17 Identities=18% Similarity=0.456 Sum_probs=13.9
Q ss_pred eeccCCcEEEEEcCHHH
Q 045201 3 RILRPEGAVIIRDQADV 19 (66)
Q Consensus 3 RILRP~G~vIiRD~~~v 19 (66)
|+|+|||.+++-.....
T Consensus 151 ~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 151 NWLKPNALIYVETEKDK 167 (201)
T ss_dssp TCEEEEEEEEEEEESSS
T ss_pred CccCCCcEEEEEECCCC
Confidence 67999999999776654
No 145
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=63.64 E-value=1.3 Score=28.95 Aligned_cols=13 Identities=31% Similarity=0.769 Sum_probs=11.6
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|+|||++++-.
T Consensus 163 ~~LkpgG~l~~~~ 175 (293)
T 3thr_A 163 SMVRPGGLLVIDH 175 (293)
T ss_dssp HTEEEEEEEEEEE
T ss_pred HHcCCCeEEEEEe
Confidence 7899999999875
No 146
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=63.54 E-value=1.3 Score=28.68 Aligned_cols=15 Identities=40% Similarity=0.565 Sum_probs=12.5
Q ss_pred ceeccCCcEEEEEcC
Q 045201 2 DRILRPEGAVIIRDQ 16 (66)
Q Consensus 2 DRILRP~G~vIiRD~ 16 (66)
-|+|+|||.+++-..
T Consensus 161 ~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 161 ARHLRPGGYFIMTVP 175 (298)
T ss_dssp HHTEEEEEEEEEEEE
T ss_pred HHhcCCCCEEEEEEC
Confidence 378999999998764
No 147
>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth regulation, transforming protein, alternative initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB: 1tce_A*
Probab=63.44 E-value=3.2 Score=24.24 Aligned_cols=28 Identities=14% Similarity=0.183 Sum_probs=18.9
Q ss_pred eeccCCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 3 RILRPEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILRP~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
++|+|.|.++||++... -..++-+++++
T Consensus 21 ~lL~~~G~FLVR~S~~~---~g~~~LSv~~~ 48 (104)
T 1mil_A 21 ALLQLNGDFLVRESTTT---PGQYVLTGLQS 48 (104)
T ss_dssp TTCCSTTEEEEEECCSS---CSSEEEEEEET
T ss_pred HHhccCCcEEEEeCCCC---CCCEEEEEEEC
Confidence 57889999999998642 11344555554
No 148
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=63.12 E-value=1.4 Score=30.76 Aligned_cols=31 Identities=26% Similarity=0.405 Sum_probs=22.5
Q ss_pred eeccCCcEEEEEcCH-----------------------HHHHHHHhhhccCCce
Q 045201 3 RILRPEGAVIIRDQA-----------------------DVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILRP~G~vIiRD~~-----------------------~vi~~v~~i~~~l~W~ 33 (66)
|.|+|||++++.|-. -..+++.+++..-.+.
T Consensus 191 r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~ 244 (383)
T 4fsd_A 191 RVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGFR 244 (383)
T ss_dssp HHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCC
T ss_pred HHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCCc
Confidence 789999999997521 1236777788777775
No 149
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=63.09 E-value=1.3 Score=28.70 Aligned_cols=15 Identities=33% Similarity=0.618 Sum_probs=12.2
Q ss_pred ceeccCCcEEEEEcC
Q 045201 2 DRILRPEGAVIIRDQ 16 (66)
Q Consensus 2 DRILRP~G~vIiRD~ 16 (66)
-|+|+|||.+++-+.
T Consensus 165 ~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 165 ARVVKPGGWVITATP 179 (269)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHhcCCCcEEEEEEc
Confidence 378999999988753
No 150
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=63.00 E-value=3.3 Score=27.28 Aligned_cols=32 Identities=6% Similarity=-0.031 Sum_probs=23.6
Q ss_pred eeccCCcEEEEEcCHH-HHHHHHhhhccCCcee
Q 045201 3 RILRPEGAVIIRDQAD-VLVKVRKIVGGMRWNT 34 (66)
Q Consensus 3 RILRP~G~vIiRD~~~-vi~~v~~i~~~l~W~~ 34 (66)
|.|+|||.+++-+... -..++.+.+....|..
T Consensus 199 ~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 199 SMMKPGSVATFYLPNFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp HTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEE
T ss_pred HHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 6799999999877654 6667777776666653
No 151
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=62.69 E-value=1.6 Score=25.86 Aligned_cols=15 Identities=7% Similarity=0.335 Sum_probs=12.2
Q ss_pred eeccCCcEEEEEcCH
Q 045201 3 RILRPEGAVIIRDQA 17 (66)
Q Consensus 3 RILRP~G~vIiRD~~ 17 (66)
|+|+|||.+++-...
T Consensus 135 ~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 135 GLVEAGGLYVLQHPK 149 (171)
T ss_dssp TCEEEEEEEEEEEET
T ss_pred cccCCCcEEEEEeCC
Confidence 789999999986543
No 152
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=62.05 E-value=2.7 Score=29.22 Aligned_cols=14 Identities=29% Similarity=0.441 Sum_probs=11.9
Q ss_pred eeccCCcEEEEEcC
Q 045201 3 RILRPEGAVIIRDQ 16 (66)
Q Consensus 3 RILRP~G~vIiRD~ 16 (66)
|.|+|||.++|-|.
T Consensus 288 ~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 288 AALPDHGKVIVAEY 301 (368)
T ss_dssp HHSCTTCEEEEEEC
T ss_pred HHcCCCCEEEEEEe
Confidence 57999999999763
No 153
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=61.99 E-value=2.8 Score=29.01 Aligned_cols=13 Identities=15% Similarity=0.291 Sum_probs=11.4
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|+|||.++|-|
T Consensus 275 ~~L~pgG~l~i~e 287 (363)
T 3dp7_A 275 QSIGKDSKVYIME 287 (363)
T ss_dssp HHCCTTCEEEEEE
T ss_pred HhcCCCcEEEEEe
Confidence 6799999999976
No 154
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=61.96 E-value=3.4 Score=25.77 Aligned_cols=16 Identities=6% Similarity=0.281 Sum_probs=13.5
Q ss_pred eeccCCcEEEEEcCHH
Q 045201 3 RILRPEGAVIIRDQAD 18 (66)
Q Consensus 3 RILRP~G~vIiRD~~~ 18 (66)
|.|+|||.+++-+..+
T Consensus 129 ~~LkpgG~li~~~~~~ 144 (217)
T 3jwh_A 129 EFAQPKIVIVTTPNIE 144 (217)
T ss_dssp TTTCCSEEEEEEEBHH
T ss_pred HHcCCCEEEEEccCcc
Confidence 7899999999877654
No 155
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=61.93 E-value=1.4 Score=27.70 Aligned_cols=13 Identities=23% Similarity=0.542 Sum_probs=11.5
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|+|+|||.+++-+
T Consensus 132 ~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 132 QALSPGGHFVFST 144 (243)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HhcCcCcEEEEEe
Confidence 6899999999975
No 156
>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development, SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=61.47 E-value=2.9 Score=25.33 Aligned_cols=28 Identities=14% Similarity=0.285 Sum_probs=19.1
Q ss_pred eeccCCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 3 RILRPEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILRP~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
++|+|.|.++||++...- ..++-+++++
T Consensus 31 ~lL~~~G~FLVR~S~~~~---g~y~LSv~~~ 58 (116)
T 2kk6_A 31 ELLKKQGDFLVRESHGKP---GEYVLSVYSD 58 (116)
T ss_dssp HTCCSTTCEEEEECTTCT---TCEEEEEEET
T ss_pred HHhccCCcEEEEECCCCC---CcEEEEEEEC
Confidence 578999999999996422 1345555553
No 157
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=60.83 E-value=1.7 Score=29.14 Aligned_cols=14 Identities=21% Similarity=0.366 Sum_probs=12.0
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++-+
T Consensus 208 ~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 208 SRFLKVGGRYVTIT 221 (312)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHcCCCcEEEEEE
Confidence 37899999999876
No 158
>2y3m_A Emhofq, protein transport protein HOFQ; secretin, DNA uptake, competence; 2.30A {Aggregatibacter actinomycetemcomitans}
Probab=60.81 E-value=5.3 Score=25.06 Aligned_cols=24 Identities=13% Similarity=0.432 Sum_probs=21.1
Q ss_pred CcEEEEEcCHHHHHHHHhhhccCC
Q 045201 8 EGAVIIRDQADVLVKVRKIVGGMR 31 (66)
Q Consensus 8 ~G~vIiRD~~~vi~~v~~i~~~l~ 31 (66)
.+.+||+|+++.+.+++++++.|.
T Consensus 144 tN~liv~~~~~~i~~i~~li~~lD 167 (175)
T 2y3m_A 144 SNLLLIQDEPRSVRNIKKLIKELD 167 (175)
T ss_dssp TTEEEEEECHHHHHHHHHHHHHHC
T ss_pred CCEEEEEcCHHHHHHHHHHHHHhC
Confidence 458999999999999999998763
No 159
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=60.63 E-value=1.7 Score=26.99 Aligned_cols=15 Identities=33% Similarity=0.634 Sum_probs=12.6
Q ss_pred eeccCCcEEEEEcCH
Q 045201 3 RILRPEGAVIIRDQA 17 (66)
Q Consensus 3 RILRP~G~vIiRD~~ 17 (66)
|.|+|||.+++-+..
T Consensus 130 ~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 130 RVLKPSGKFIMYFTD 144 (227)
T ss_dssp HHEEEEEEEEEEEEC
T ss_pred HHcCCCcEEEEEecC
Confidence 689999999998653
No 160
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=60.34 E-value=1.5 Score=28.99 Aligned_cols=12 Identities=33% Similarity=0.504 Sum_probs=10.7
Q ss_pred ceeccCCcEEEE
Q 045201 2 DRILRPEGAVII 13 (66)
Q Consensus 2 DRILRP~G~vIi 13 (66)
-|+|+|||.+++
T Consensus 136 ~~~LkpgG~l~i 147 (299)
T 3g5t_A 136 YANLRKDGTIAI 147 (299)
T ss_dssp HHHEEEEEEEEE
T ss_pred HHhcCCCcEEEE
Confidence 378999999998
No 161
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=60.30 E-value=4.2 Score=26.65 Aligned_cols=31 Identities=10% Similarity=0.084 Sum_probs=23.3
Q ss_pred eeccCCcEEEEEcC-HHHHHHHHhhhccCCce
Q 045201 3 RILRPEGAVIIRDQ-ADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILRP~G~vIiRD~-~~vi~~v~~i~~~l~W~ 33 (66)
|.|+|||.+++-+. .+-+.++.+.+....|.
T Consensus 201 ~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 201 EALKGGGRFATVCPTTNQVQETLKKLQELPFI 232 (277)
T ss_dssp HHEEEEEEEEEEESSHHHHHHHHHHHHHSSEE
T ss_pred HHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 67999999999876 34667777777666665
No 162
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=60.09 E-value=1.6 Score=27.45 Aligned_cols=11 Identities=27% Similarity=0.655 Sum_probs=10.1
Q ss_pred eeccCCcEEEE
Q 045201 3 RILRPEGAVII 13 (66)
Q Consensus 3 RILRP~G~vIi 13 (66)
|+|+|||.+++
T Consensus 125 ~~L~pgG~l~~ 135 (243)
T 3d2l_A 125 RLLTDGGKLLF 135 (243)
T ss_dssp HHEEEEEEEEE
T ss_pred HhcCCCeEEEE
Confidence 68999999998
No 163
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=59.87 E-value=3.2 Score=28.93 Aligned_cols=14 Identities=21% Similarity=0.351 Sum_probs=11.9
Q ss_pred eeccCCcEEEEEcC
Q 045201 3 RILRPEGAVIIRDQ 16 (66)
Q Consensus 3 RILRP~G~vIiRD~ 16 (66)
|.|+|||.++|-|.
T Consensus 286 ~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 286 DALPAHGKVVLVQC 299 (364)
T ss_dssp HHSCTTCEEEEEEC
T ss_pred HHcCCCCEEEEEEe
Confidence 57999999999764
No 164
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=59.84 E-value=3.5 Score=28.16 Aligned_cols=13 Identities=31% Similarity=0.593 Sum_probs=11.7
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|+|||.++|-|
T Consensus 283 ~~L~pgG~l~i~e 295 (359)
T 1x19_A 283 DAMRSGGRLLILD 295 (359)
T ss_dssp TTCCTTCEEEEEE
T ss_pred HhcCCCCEEEEEe
Confidence 6899999998877
No 165
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=59.76 E-value=2 Score=26.42 Aligned_cols=14 Identities=7% Similarity=0.309 Sum_probs=12.1
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|+|+|||.+++-.
T Consensus 117 ~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 117 KPYIKQNGVILASI 130 (230)
T ss_dssp GGGEEEEEEEEEEE
T ss_pred HHHcCCCCEEEEEe
Confidence 47899999999964
No 166
>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain, feline sarcoma oncogene, structural genomics; NMR {Homo sapiens} PDB: 2dcr_A
Probab=59.74 E-value=4 Score=24.35 Aligned_cols=27 Identities=19% Similarity=0.452 Sum_probs=19.1
Q ss_pred eeccCCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 3 RILRPEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILRP~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
++|+|.|.++||++...- .++-+++++
T Consensus 30 ~lL~~~G~FLVR~S~~~~----~y~LSv~~~ 56 (114)
T 1wqu_A 30 ELLVHSGDFLVRESQGKQ----EYVLSVLWD 56 (114)
T ss_dssp TTCCSTTEEEEEECSSSC----CEEEEEEET
T ss_pred HHhccCCeEEEEEcCCCC----CEEEEEEEC
Confidence 578999999999997521 455555553
No 167
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=59.65 E-value=5.6 Score=26.95 Aligned_cols=15 Identities=13% Similarity=0.040 Sum_probs=12.2
Q ss_pred ceeccCCcEEEEEcC
Q 045201 2 DRILRPEGAVIIRDQ 16 (66)
Q Consensus 2 DRILRP~G~vIiRD~ 16 (66)
-|.|+|||.+++-..
T Consensus 206 ~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 206 YPHLKHGGVCAVYVV 220 (336)
T ss_dssp GGGEEEEEEEEEEES
T ss_pred HHhcCCCcEEEEEeC
Confidence 378999999998654
No 168
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=59.55 E-value=1.6 Score=28.88 Aligned_cols=13 Identities=23% Similarity=0.440 Sum_probs=11.4
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|+|||.++|-.
T Consensus 178 ~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 178 EHLEPGGKFLLSL 190 (299)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HHcCCCcEEEEEe
Confidence 7899999999964
No 169
>1gxi_E Photosystem I reaction center subunit IV; photosynthesis, PSAE SUB-UNIT, thylakoid; NMR {Synechocystis SP} SCOP: b.34.4.2 PDB: 1pse_A 1psf_A
Probab=59.50 E-value=2.3 Score=25.19 Aligned_cols=8 Identities=50% Similarity=0.551 Sum_probs=6.4
Q ss_pred eeccCCcE
Q 045201 3 RILRPEGA 10 (66)
Q Consensus 3 RILRP~G~ 10 (66)
||||||-+
T Consensus 9 rIlR~ESY 16 (73)
T 1gxi_E 9 RIKRTESY 16 (73)
T ss_dssp EECCSSST
T ss_pred EEccccce
Confidence 89999854
No 170
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=59.35 E-value=1.9 Score=27.22 Aligned_cols=16 Identities=13% Similarity=0.287 Sum_probs=13.2
Q ss_pred eeccCCcEEEEEcCHH
Q 045201 3 RILRPEGAVIIRDQAD 18 (66)
Q Consensus 3 RILRP~G~vIiRD~~~ 18 (66)
|+|+|||.+++-....
T Consensus 148 ~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 148 GWLADEALIYVESEVE 163 (202)
T ss_dssp TCEEEEEEEEEEEEGG
T ss_pred CccCCCcEEEEEECCC
Confidence 6799999999887653
No 171
>3gr5_A ESCC; secretin, type III secretion system, outer membrane, transport, membrane protein; 2.05A {Escherichia coli}
Probab=59.19 E-value=6.1 Score=25.21 Aligned_cols=25 Identities=4% Similarity=0.182 Sum_probs=21.7
Q ss_pred cCCcEEEEEcCHHHHHHHHhhhccC
Q 045201 6 RPEGAVIIRDQADVLVKVRKIVGGM 30 (66)
Q Consensus 6 RP~G~vIiRD~~~vi~~v~~i~~~l 30 (66)
-..+.++|+|.+..|+.|+++++.|
T Consensus 125 ~~tn~l~Vsg~p~~v~~v~~~i~~L 149 (156)
T 3gr5_A 125 TTFNSIEVRGVPECIKYITSLSESL 149 (156)
T ss_dssp SSTTCEEEEECHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCHHHHHHHHHHHHHH
Confidence 3577999999999999999998754
No 172
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=59.17 E-value=11 Score=26.47 Aligned_cols=12 Identities=50% Similarity=0.814 Sum_probs=11.1
Q ss_pred eeccCCcEEEEE
Q 045201 3 RILRPEGAVIIR 14 (66)
Q Consensus 3 RILRP~G~vIiR 14 (66)
|.|+|||.+++.
T Consensus 223 ~~LkpgG~lv~~ 234 (334)
T 1xj5_A 223 RALRPGGVVCTQ 234 (334)
T ss_dssp HHEEEEEEEEEE
T ss_pred HhcCCCcEEEEe
Confidence 689999999997
No 173
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=59.10 E-value=3.4 Score=27.75 Aligned_cols=48 Identities=15% Similarity=0.342 Sum_probs=29.8
Q ss_pred eeccCCcEEEEEcCH-------H------------------HHHHHHhhhccCCceeE-EeecCCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQA-------D------------------VLVKVRKIVGGMRWNTK-IIDHEDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~-------~------------------vi~~v~~i~~~l~W~~~-~~~~e~~~~~~e~iLi~~K 54 (66)
|.|+|||.++|-|.. . ..+++++++..-.++.. +... .+ ...++.|+|
T Consensus 260 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~-~~---~~~~i~~~~ 333 (334)
T 2ip2_A 260 EAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDL-PM---ETRMIVAAR 333 (334)
T ss_dssp HHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEE-TT---TEEEEEEEE
T ss_pred HhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEEC-CC---CCEEEEEEe
Confidence 679999999998631 0 14456667777777643 3322 22 356777776
No 174
>1jb0_E Photosystem 1 reaction centre subunit IV; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: b.34.4.2 PDB: 3pcq_E*
Probab=59.04 E-value=2.4 Score=25.25 Aligned_cols=14 Identities=64% Similarity=0.952 Sum_probs=9.8
Q ss_pred eeccCC-------cEEEEEcC
Q 045201 3 RILRPE-------GAVIIRDQ 16 (66)
Q Consensus 3 RILRP~-------G~vIiRD~ 16 (66)
|||||| |.|.--|.
T Consensus 8 rIlR~ESYWyn~vGtVasVD~ 28 (75)
T 1jb0_E 8 KILRPESYWYNEVGTVASVDQ 28 (75)
T ss_dssp EECCTTCTTBTCEEEEEEECC
T ss_pred EEccccceeecCcceEEEEec
Confidence 899999 55655444
No 175
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=58.75 E-value=3.6 Score=26.31 Aligned_cols=29 Identities=10% Similarity=0.365 Sum_probs=22.2
Q ss_pred eeccCCcEEEEEc-CHHHHHHHHhhhccCC
Q 045201 3 RILRPEGAVIIRD-QADVLVKVRKIVGGMR 31 (66)
Q Consensus 3 RILRP~G~vIiRD-~~~vi~~v~~i~~~l~ 31 (66)
|.|+|||.+++-. ..+-+.++.+.+....
T Consensus 182 ~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 182 KALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp HHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred HHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 6899999999875 4566777777776665
No 176
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=57.59 E-value=3.3 Score=26.67 Aligned_cols=15 Identities=13% Similarity=0.355 Sum_probs=12.3
Q ss_pred eeccCCcEEEEEcCH
Q 045201 3 RILRPEGAVIIRDQA 17 (66)
Q Consensus 3 RILRP~G~vIiRD~~ 17 (66)
|.|+|||++++-+..
T Consensus 202 ~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 202 SALPAHAVIAVTDRS 216 (250)
T ss_dssp HHSCTTCEEEEEESS
T ss_pred HhcCCCcEEEEeCcc
Confidence 679999999996554
No 177
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=57.33 E-value=4.1 Score=28.21 Aligned_cols=49 Identities=8% Similarity=0.133 Sum_probs=32.5
Q ss_pred eeccCCcEEEEEcCH------------------------HHHHHHHhhhccCCceeEEeec-CCCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQA------------------------DVLVKVRKIVGGMRWNTKIIDH-EDGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~------------------------~vi~~v~~i~~~l~W~~~~~~~-e~~~~~~e~iLi~~K 54 (66)
|.|+|||+++|-|.. -..++.++++..-.++..-... ..+ ...++.|+|
T Consensus 295 ~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~---~~svie~~~ 368 (369)
T 3gwz_A 295 TAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLPCGAG---PVRIVEIRR 368 (369)
T ss_dssp TTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEECSSS---SEEEEEEEE
T ss_pred HHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEECCCC---CcEEEEEEe
Confidence 679999999996621 1146678888888887543322 222 356887776
No 178
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=57.03 E-value=2.2 Score=25.69 Aligned_cols=16 Identities=13% Similarity=0.219 Sum_probs=13.0
Q ss_pred eeccCCcEEEEEcCHH
Q 045201 3 RILRPEGAVIIRDQAD 18 (66)
Q Consensus 3 RILRP~G~vIiRD~~~ 18 (66)
|+|+|||.+++-....
T Consensus 126 ~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 126 NLLSEQVMVVCETDKT 141 (177)
T ss_dssp TCEEEEEEEEEEEETT
T ss_pred CCcCCCcEEEEEECCc
Confidence 7899999999976543
No 179
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=56.39 E-value=2.2 Score=26.84 Aligned_cols=32 Identities=16% Similarity=0.198 Sum_probs=22.8
Q ss_pred eeccCCcEEEEEcCH------------------------HHHHHHHhhhccCCcee
Q 045201 3 RILRPEGAVIIRDQA------------------------DVLVKVRKIVGGMRWNT 34 (66)
Q Consensus 3 RILRP~G~vIiRD~~------------------------~vi~~v~~i~~~l~W~~ 34 (66)
|+|+|||.+++-+-. -..+++.+++....++.
T Consensus 127 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 182 (219)
T 1vlm_A 127 RILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEE 182 (219)
T ss_dssp HHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEE
T ss_pred HHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeE
Confidence 789999999997421 13466777777777765
No 180
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=56.26 E-value=2 Score=27.86 Aligned_cols=15 Identities=33% Similarity=0.623 Sum_probs=12.3
Q ss_pred ceeccCCcEEEEEcC
Q 045201 2 DRILRPEGAVIIRDQ 16 (66)
Q Consensus 2 DRILRP~G~vIiRD~ 16 (66)
-|+|+|||.+++-..
T Consensus 139 ~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 139 RRVLVPDGLLIATVD 153 (260)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHcCCCeEEEEEeC
Confidence 378999999998653
No 181
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=55.49 E-value=2.3 Score=29.34 Aligned_cols=13 Identities=46% Similarity=0.833 Sum_probs=11.4
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|+|||.++|-|
T Consensus 294 ~~L~pgG~l~i~e 306 (372)
T 1fp1_D 294 KALSPNGKVIIVE 306 (372)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HhcCCCCEEEEEE
Confidence 6799999999875
No 182
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=55.34 E-value=2.2 Score=26.45 Aligned_cols=14 Identities=14% Similarity=0.216 Sum_probs=11.3
Q ss_pred eeccCCcEEEEEcC
Q 045201 3 RILRPEGAVIIRDQ 16 (66)
Q Consensus 3 RILRP~G~vIiRD~ 16 (66)
|.|+|||.+++--.
T Consensus 162 ~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 162 TQLDEGGILVLPVG 175 (210)
T ss_dssp HTEEEEEEEEEEEC
T ss_pred HhcccCcEEEEEEc
Confidence 67999999998543
No 183
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=53.19 E-value=2.5 Score=26.28 Aligned_cols=15 Identities=20% Similarity=0.355 Sum_probs=12.1
Q ss_pred eeccCCcEEEEEcCH
Q 045201 3 RILRPEGAVIIRDQA 17 (66)
Q Consensus 3 RILRP~G~vIiRD~~ 17 (66)
|.|+|||.+++--..
T Consensus 165 ~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 165 RQLKDGGKLLMPVGR 179 (215)
T ss_dssp HTEEEEEEEEEEESS
T ss_pred HHcCCCcEEEEEECC
Confidence 689999999886543
No 184
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=52.89 E-value=2.6 Score=28.16 Aligned_cols=34 Identities=12% Similarity=0.178 Sum_probs=21.6
Q ss_pred ceeccCCcEEEEEc---------CH---HHHHHHHhhhccCCceeEE
Q 045201 2 DRILRPEGAVIIRD---------QA---DVLVKVRKIVGGMRWNTKI 36 (66)
Q Consensus 2 DRILRP~G~vIiRD---------~~---~vi~~v~~i~~~l~W~~~~ 36 (66)
-|+|+|||.+++-. .+ -..+++..++.. .|++..
T Consensus 178 ~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~ 223 (252)
T 2gb4_A 178 LSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQC 223 (252)
T ss_dssp HHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEE
T ss_pred HHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEE
Confidence 37899999986321 00 134678888876 477643
No 185
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=52.85 E-value=2.7 Score=28.05 Aligned_cols=14 Identities=29% Similarity=0.292 Sum_probs=12.1
Q ss_pred eeccCCcEEEEEcC
Q 045201 3 RILRPEGAVIIRDQ 16 (66)
Q Consensus 3 RILRP~G~vIiRD~ 16 (66)
|+|+|||.+++-.-
T Consensus 143 ~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 143 ERLSPGGYFIGTTP 156 (313)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred HHhCCCcEEEEecC
Confidence 78999999998754
No 186
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=52.48 E-value=2.9 Score=28.26 Aligned_cols=48 Identities=13% Similarity=0.167 Sum_probs=30.0
Q ss_pred eeccCCcEEEEEcC--------HH-------------------HHHHHHhhhccCCceeEEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQ--------AD-------------------VLVKVRKIVGGMRWNTKIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~--------~~-------------------vi~~v~~i~~~l~W~~~~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.++|-|. +. ..+++++++..-.++..-.. .+...+++++|+
T Consensus 275 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~-----~g~~~l~~a~kp 349 (352)
T 3mcz_A 275 GLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERS-----IGRYTLLIGQRS 349 (352)
T ss_dssp HTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEEE-----ETTEEEEEEECC
T ss_pred HHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeeec-----cCceEEEEEecC
Confidence 67999999999762 10 13445666666666643311 124678888884
No 187
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=52.09 E-value=2.5 Score=26.83 Aligned_cols=12 Identities=33% Similarity=0.639 Sum_probs=10.4
Q ss_pred eeccCCcEEEEE
Q 045201 3 RILRPEGAVIIR 14 (66)
Q Consensus 3 RILRP~G~vIiR 14 (66)
|.|+|||.+|+-
T Consensus 133 ~~L~pgG~li~~ 144 (252)
T 1wzn_A 133 EALKPGGVFITD 144 (252)
T ss_dssp HHEEEEEEEEEE
T ss_pred HHcCCCeEEEEe
Confidence 689999999974
No 188
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=51.99 E-value=4.6 Score=27.88 Aligned_cols=12 Identities=8% Similarity=0.163 Sum_probs=10.8
Q ss_pred eeccCCcEEEEE
Q 045201 3 RILRPEGAVIIR 14 (66)
Q Consensus 3 RILRP~G~vIiR 14 (66)
|.|+|||.+++.
T Consensus 179 ~~LkpGG~~v~k 190 (305)
T 2p41_A 179 NWLSNNTQFCVK 190 (305)
T ss_dssp HHCCTTCEEEEE
T ss_pred HHhCCCCEEEEE
Confidence 789999999995
No 189
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=51.68 E-value=2.7 Score=26.40 Aligned_cols=14 Identities=21% Similarity=0.297 Sum_probs=12.0
Q ss_pred eeccCCcEEEEEcC
Q 045201 3 RILRPEGAVIIRDQ 16 (66)
Q Consensus 3 RILRP~G~vIiRD~ 16 (66)
|.|+|||.+++-..
T Consensus 153 ~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 153 EQLKEGGIMILPIG 166 (231)
T ss_dssp HTEEEEEEEEEEEC
T ss_pred HHcCCCcEEEEEEc
Confidence 68999999998754
No 190
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=50.81 E-value=2.9 Score=26.28 Aligned_cols=12 Identities=33% Similarity=0.695 Sum_probs=10.4
Q ss_pred eeccCCcEEEEE
Q 045201 3 RILRPEGAVIIR 14 (66)
Q Consensus 3 RILRP~G~vIiR 14 (66)
|.|+|||.+++-
T Consensus 170 ~~LkpgG~lv~~ 181 (226)
T 1i1n_A 170 DQLKPGGRLILP 181 (226)
T ss_dssp HTEEEEEEEEEE
T ss_pred HhcCCCcEEEEE
Confidence 679999999984
No 191
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=50.12 E-value=2.9 Score=26.58 Aligned_cols=32 Identities=9% Similarity=0.276 Sum_probs=19.6
Q ss_pred ceeccCCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 2 DRILRPEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 2 DRILRP~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
-|+|+|||.++.-........+...+....+.
T Consensus 129 ~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~ 160 (226)
T 3m33_A 129 PELAAPDAHFLYVGPRLNVPEVPERLAAVGWD 160 (226)
T ss_dssp HHHEEEEEEEEEEESSSCCTHHHHHHHHTTCE
T ss_pred HHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCe
Confidence 37899999999443333344555555555554
No 192
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=50.09 E-value=16 Score=25.30 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=21.1
Q ss_pred eeccCCcEEEEEcC-------HHHHHHHHhhhccCCceeE
Q 045201 3 RILRPEGAVIIRDQ-------ADVLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD~-------~~vi~~v~~i~~~l~W~~~ 35 (66)
|+|+|||.+++-.. ..+..-+++.+.....++.
T Consensus 260 ~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 260 EILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp HTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred HhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 68999999777432 2344555556666666553
No 193
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=48.43 E-value=19 Score=24.29 Aligned_cols=13 Identities=23% Similarity=0.307 Sum_probs=11.1
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|+|||.++|-+
T Consensus 170 r~LKpGG~lvI~i 182 (233)
T 4df3_A 170 FFLRDGGYMLMAI 182 (233)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HhccCCCEEEEEE
Confidence 7899999999853
No 194
>3oss_D Type 2 secretion system, secretin GSPD; general secretory pathway, HR domain, lanthanide-B TAG, protein transport; 2.63A {Escherichia coli}
Probab=48.00 E-value=9.4 Score=24.89 Aligned_cols=25 Identities=12% Similarity=0.472 Sum_probs=21.3
Q ss_pred cCCcEEEEEcCHHHHHHHHhhhccC
Q 045201 6 RPEGAVIIRDQADVLVKVRKIVGGM 30 (66)
Q Consensus 6 RP~G~vIiRD~~~vi~~v~~i~~~l 30 (66)
.+...+||+|+.+.++++++++..|
T Consensus 154 ~~tN~Liv~d~~~~i~~i~~lI~~l 178 (181)
T 3oss_D 154 DPSNVIMLTGRASVVERLTEVIQRV 178 (181)
T ss_dssp ETTTEEEEEEEHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHHH
Confidence 3457899999999999999998754
No 195
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=46.88 E-value=3.6 Score=26.83 Aligned_cols=33 Identities=9% Similarity=0.040 Sum_probs=20.4
Q ss_pred ceeccCCcEEEEEcCH--------------HHHHHHHhhhccCCceeEE
Q 045201 2 DRILRPEGAVIIRDQA--------------DVLVKVRKIVGGMRWNTKI 36 (66)
Q Consensus 2 DRILRP~G~vIiRD~~--------------~vi~~v~~i~~~l~W~~~~ 36 (66)
-|.|+|||.++|-... -.-++++++... |+...
T Consensus 210 ~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~ 256 (286)
T 3m70_A 210 KEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLE 256 (286)
T ss_dssp HHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEE
T ss_pred HHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEE
Confidence 3789999997764321 113466666666 77643
No 196
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=45.84 E-value=3.8 Score=26.14 Aligned_cols=14 Identities=29% Similarity=0.311 Sum_probs=11.1
Q ss_pred eeccCCcEEEEEcC
Q 045201 3 RILRPEGAVIIRDQ 16 (66)
Q Consensus 3 RILRP~G~vIiRD~ 16 (66)
|.|+|||.+++--.
T Consensus 177 ~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 177 EQLKIGGKLIIPVG 190 (235)
T ss_dssp HTEEEEEEEEEEEC
T ss_pred HhcCCCcEEEEEEe
Confidence 67999999988543
No 197
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=45.83 E-value=45 Score=23.39 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=23.0
Q ss_pred eeccCCcEEEEEcCH------HHHHHHHhhhccCCce
Q 045201 3 RILRPEGAVIIRDQA------DVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILRP~G~vIiRD~~------~vi~~v~~i~~~l~W~ 33 (66)
|+|+|||.+++-... .+.+.+++.+.....+
T Consensus 319 ~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 319 EILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp HTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred HhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 689999999997543 3555666777777776
No 198
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=45.69 E-value=3.8 Score=25.91 Aligned_cols=13 Identities=23% Similarity=0.322 Sum_probs=10.7
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|+|||.+++--
T Consensus 182 ~~LkpgG~lvi~~ 194 (227)
T 1r18_A 182 NQLASGGRLIVPV 194 (227)
T ss_dssp HTEEEEEEEEEEE
T ss_pred HHhcCCCEEEEEE
Confidence 5799999998854
No 199
>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced, ATP-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens} PDB: 3eac_A
Probab=45.61 E-value=8.5 Score=22.24 Aligned_cols=28 Identities=14% Similarity=0.242 Sum_probs=17.8
Q ss_pred eecc--CCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 3 RILR--PEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILR--P~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
++|+ |.|.++||++...- ..++-+++++
T Consensus 22 ~lL~~~~~G~FLVR~S~~~~---g~~~LSv~~~ 51 (106)
T 3eaz_A 22 RLLYPPETGLFLVRESTNYP---GDYTLCVSSD 51 (106)
T ss_dssp HHTCSCCTTEEEEEECTTST---TCEEEEEEET
T ss_pred HHhCCCCCCEEEEEECCCCC---CcEEEEEEeC
Confidence 4577 99999999986321 1344455554
No 200
>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain, signaling protein, structural genomics, joint CE structural genomics, JCSG; 1.50A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jwo_A
Probab=44.83 E-value=7.5 Score=22.11 Aligned_cols=16 Identities=25% Similarity=0.592 Sum_probs=12.8
Q ss_pred eecc--CCcEEEEEcCHH
Q 045201 3 RILR--PEGAVIIRDQAD 18 (66)
Q Consensus 3 RILR--P~G~vIiRD~~~ 18 (66)
++|+ |.|..+||++..
T Consensus 19 ~lL~~~~~G~FLVR~S~~ 36 (98)
T 3us4_A 19 QQLQPPEDGLFLVRESAR 36 (98)
T ss_dssp HHTCSCCTTCEEEEECSS
T ss_pred HHccCCCCcEEEEEeCCC
Confidence 4577 899999999753
No 201
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=44.43 E-value=9.7 Score=24.56 Aligned_cols=30 Identities=17% Similarity=0.405 Sum_probs=19.4
Q ss_pred eeccCCcEEEEEcC-HHHHHHHHhhhcc-CCc
Q 045201 3 RILRPEGAVIIRDQ-ADVLVKVRKIVGG-MRW 32 (66)
Q Consensus 3 RILRP~G~vIiRD~-~~vi~~v~~i~~~-l~W 32 (66)
|+|+|||.+++-.. .+-+.++...+.. ..|
T Consensus 191 ~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f 222 (280)
T 1i9g_A 191 RLLVAGGVLMVYVATVTQLSRIVEALRAKQCW 222 (280)
T ss_dssp HHEEEEEEEEEEESSHHHHHHHHHHHHHHSSB
T ss_pred HhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCc
Confidence 68999999988653 4455555554443 444
No 202
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=43.88 E-value=11 Score=26.09 Aligned_cols=35 Identities=6% Similarity=0.208 Sum_probs=26.2
Q ss_pred eeccCCcEEEEEcC-------HHHHHHHHhhhccCCceeEEe
Q 045201 3 RILRPEGAVIIRDQ-------ADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 3 RILRP~G~vIiRD~-------~~vi~~v~~i~~~l~W~~~~~ 37 (66)
++|+|||++.+-+. .+..+.+++++....+++...
T Consensus 213 ~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 213 SIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp HHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred HHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEEE
Confidence 57899999877532 345778888888888887644
No 203
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=43.33 E-value=4.2 Score=28.25 Aligned_cols=34 Identities=21% Similarity=0.401 Sum_probs=23.3
Q ss_pred ceeccCCcEEEEEcCH--H------------------HHHHHHhhhccCCceeE
Q 045201 2 DRILRPEGAVIIRDQA--D------------------VLVKVRKIVGGMRWNTK 35 (66)
Q Consensus 2 DRILRP~G~vIiRD~~--~------------------vi~~v~~i~~~l~W~~~ 35 (66)
-|+|+|||.+++.... . ....++.++..-.++..
T Consensus 195 ~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~ 248 (416)
T 4e2x_A 195 DALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELV 248 (416)
T ss_dssp HHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEE
T ss_pred HHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEE
Confidence 3789999999997431 0 12467777777777643
No 204
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=42.65 E-value=4.3 Score=25.43 Aligned_cols=14 Identities=29% Similarity=0.461 Sum_probs=11.0
Q ss_pred eeccCCcEEEEEcC
Q 045201 3 RILRPEGAVIIRDQ 16 (66)
Q Consensus 3 RILRP~G~vIiRD~ 16 (66)
+.|+|||.+++--.
T Consensus 181 ~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 181 DLLAENGKLIIPIE 194 (227)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEEc
Confidence 57999999987543
No 205
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=40.79 E-value=5.7 Score=27.23 Aligned_cols=14 Identities=29% Similarity=0.268 Sum_probs=11.7
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|.|+|||.++|-.
T Consensus 290 ~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 290 VRHLNSGGELRIVA 303 (343)
T ss_dssp GGGEEEEEEEEEEE
T ss_pred HHhCCCCcEEEEEE
Confidence 47899999999864
No 206
>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine kinase, signal transduction, peptide recognition, signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1 PDB: 1d1z_A 1d4w_A* 1m27_A*
Probab=40.57 E-value=9.1 Score=22.04 Aligned_cols=28 Identities=18% Similarity=0.311 Sum_probs=18.1
Q ss_pred eecc---CCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 3 RILR---PEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILR---P~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
++|+ |.|.++||++...- ..++=+++++
T Consensus 18 ~lL~~~~~~G~FLVR~S~~~~---g~~~LSv~~~ 48 (104)
T 1d4t_A 18 KLLLATGLDGSYLLRDSESVP---GVYCLCVLYH 48 (104)
T ss_dssp HHHHHHCCTTEEEEEECSSST---TCEEEEEEET
T ss_pred HHHHhcCCCCEEEEeeCCCCC---CCEEEEEEEC
Confidence 3576 89999999986421 1345555554
No 207
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=40.51 E-value=14 Score=24.44 Aligned_cols=33 Identities=6% Similarity=0.152 Sum_probs=21.1
Q ss_pred eeccCCcEEEEEcCHH------HHHH-HHhhhccCCceeE
Q 045201 3 RILRPEGAVIIRDQAD------VLVK-VRKIVGGMRWNTK 35 (66)
Q Consensus 3 RILRP~G~vIiRD~~~------vi~~-v~~i~~~l~W~~~ 35 (66)
|.|+|||.+++-+... ...+ ++.+...+.++..
T Consensus 207 ~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 207 EFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp HHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred HHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 5799999999987643 3433 4444454555543
No 208
>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.50 E-value=9 Score=22.54 Aligned_cols=28 Identities=21% Similarity=0.261 Sum_probs=18.2
Q ss_pred eecc--CCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 3 RILR--PEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILR--P~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
++|+ |.|.++||++...- ..++-+++++
T Consensus 33 ~lL~~~~~G~FLVR~S~~~~---g~y~LSv~~~ 62 (111)
T 2eo3_A 33 TRLQGQRHGMFLVRDSSTCP---GDYVLSVSEN 62 (111)
T ss_dssp HHHSSCCTTCEEEEECSSSS---SCEEEEEEET
T ss_pred HHhcCCCCceEEEEeecCCC---CCEEEEEEeC
Confidence 4677 99999999986521 1344455553
No 209
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=40.19 E-value=10 Score=26.21 Aligned_cols=50 Identities=8% Similarity=0.208 Sum_probs=32.7
Q ss_pred eeccCCcEEEEEcCH--------------H------------HHHHHHhhhccCCcee-EEeecCCCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRDQA--------------D------------VLVKVRKIVGGMRWNT-KIIDHEDGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD~~--------------~------------vi~~v~~i~~~l~W~~-~~~~~e~~~~~~e~iLi~~K~ 55 (66)
|.|+|||.++|-|.. + ..++.+.++..-.|+. ++..+ .+ ...+++|+|.
T Consensus 271 ~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~~-~~---~~~~i~ArKg 346 (353)
T 4a6d_A 271 HTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKT-GA---IYDAILARKG 346 (353)
T ss_dssp HHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEECC-SS---SCEEEEEECC
T ss_pred hhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEc-CC---ceEEEEEEec
Confidence 458999999998742 1 1346677777777864 34332 22 3568999996
Q ss_pred c
Q 045201 56 Y 56 (66)
Q Consensus 56 ~ 56 (66)
.
T Consensus 347 t 347 (353)
T 4a6d_A 347 T 347 (353)
T ss_dssp C
T ss_pred C
Confidence 3
No 210
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=40.04 E-value=3.1 Score=28.84 Aligned_cols=11 Identities=36% Similarity=0.872 Sum_probs=9.6
Q ss_pred ceeccCCcEEE
Q 045201 2 DRILRPEGAVI 12 (66)
Q Consensus 2 DRILRP~G~vI 12 (66)
+|.|+|||.+|
T Consensus 160 ~r~LkpgG~li 170 (349)
T 3q7e_A 160 DKWLAPDGLIF 170 (349)
T ss_dssp HHHEEEEEEEE
T ss_pred HHhCCCCCEEc
Confidence 58899999986
No 211
>4e9j_A General secretion pathway protein D; homodimer, XCPQ, periplasmic domain, structural protein, PER space, outer membrane; 2.03A {Pseudomonas aeruginosa} PDB: 4ec5_A
Probab=38.94 E-value=15 Score=24.52 Aligned_cols=23 Identities=17% Similarity=0.491 Sum_probs=20.3
Q ss_pred CcEEEEEcCHHHHHHHHhhhccC
Q 045201 8 EGAVIIRDQADVLVKVRKIVGGM 30 (66)
Q Consensus 8 ~G~vIiRD~~~vi~~v~~i~~~l 30 (66)
...+||+|+++.+++++++++.|
T Consensus 148 tN~Liv~g~~~~i~~i~~li~~l 170 (246)
T 4e9j_A 148 ANALIISDRSANIARIEDVIRQL 170 (246)
T ss_dssp GTEEEEEECHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCHHHHHHHHHHHHHh
Confidence 35789999999999999999766
No 212
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=38.66 E-value=8.4 Score=26.29 Aligned_cols=12 Identities=25% Similarity=0.744 Sum_probs=10.4
Q ss_pred eeccCCcEEEEE
Q 045201 3 RILRPEGAVIIR 14 (66)
Q Consensus 3 RILRP~G~vIiR 14 (66)
|.|+|||.+++-
T Consensus 234 ~~LkpGG~lv~s 245 (315)
T 1ixk_A 234 EVLKPGGILVYS 245 (315)
T ss_dssp HHEEEEEEEEEE
T ss_pred HhCCCCCEEEEE
Confidence 579999999994
No 213
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=38.48 E-value=11 Score=28.49 Aligned_cols=15 Identities=7% Similarity=0.153 Sum_probs=12.5
Q ss_pred ceeccCCcEEEEEcC
Q 045201 2 DRILRPEGAVIIRDQ 16 (66)
Q Consensus 2 DRILRP~G~vIiRD~ 16 (66)
-|.|+|||.+|+-|.
T Consensus 275 ~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 275 FANMKEGGRIVSSKP 289 (438)
T ss_dssp HTTSCTTCEEEESSC
T ss_pred HHcCCCCcEEEEeec
Confidence 378999999998754
No 214
>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}
Probab=37.73 E-value=11 Score=22.00 Aligned_cols=15 Identities=40% Similarity=0.864 Sum_probs=12.4
Q ss_pred eecc---CCcEEEEEcCH
Q 045201 3 RILR---PEGAVIIRDQA 17 (66)
Q Consensus 3 RILR---P~G~vIiRD~~ 17 (66)
++|+ |.|.++||++.
T Consensus 25 ~lL~~~~~~G~FLVR~S~ 42 (110)
T 2ekx_A 25 QLLRQKGKEGAFMVRNSS 42 (110)
T ss_dssp HHHHHTCCTTEEEEEECS
T ss_pred HHHhccCCCceEEEEecC
Confidence 3676 89999999993
No 215
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=37.68 E-value=6.9 Score=26.80 Aligned_cols=15 Identities=20% Similarity=0.512 Sum_probs=12.0
Q ss_pred ceeccCCcEEEEEcC
Q 045201 2 DRILRPEGAVIIRDQ 16 (66)
Q Consensus 2 DRILRP~G~vIiRD~ 16 (66)
-+.|+|||++++-.+
T Consensus 239 ~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 239 VPLLKPDGLLFAGHS 253 (274)
T ss_dssp GGGEEEEEEEEECTT
T ss_pred HHHhCCCcEEEEEec
Confidence 367999999998554
No 216
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=37.29 E-value=48 Score=18.09 Aligned_cols=36 Identities=11% Similarity=0.079 Sum_probs=27.8
Q ss_pred ceeccCCcEEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 2 DRILRPEGAVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 2 DRILRP~G~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
..-+++.-.+|+-|+......++.++....+.+...
T Consensus 2 ~~~~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~ 37 (130)
T 3eod_A 2 TQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLA 37 (130)
T ss_dssp -CTTTTCEEEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCeEEEEeCCHHHHHHHHHHHHhCCceEEEe
Confidence 333455567899999999999999999998887654
No 217
>3ezj_A General secretion pathway protein GSPD; general secretory pathway, secretin, single chain antibody, transport, immune system, complex; 2.80A {Escherichia coli}
Probab=36.94 E-value=17 Score=23.95 Aligned_cols=24 Identities=13% Similarity=0.495 Sum_probs=21.2
Q ss_pred CCcEEEEEcCHHHHHHHHhhhccC
Q 045201 7 PEGAVIIRDQADVLVKVRKIVGGM 30 (66)
Q Consensus 7 P~G~vIiRD~~~vi~~v~~i~~~l 30 (66)
+...+||+|++..+++++++++.|
T Consensus 143 ~~N~Liv~g~~~~i~~i~~li~~l 166 (241)
T 3ezj_A 143 PSNVIMLTGRASVVERLTEVIQRV 166 (241)
T ss_dssp TTTEEEEEEEHHHHHHHHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHh
Confidence 467899999999999999998765
No 218
>1qp2_A Protein (PSAE protein); mainly beta, roll, pleckstrin topology, SH3-like, electron T; NMR {Nostoc SP} SCOP: b.34.4.2 PDB: 1qp3_A
Probab=36.38 E-value=8.9 Score=22.45 Aligned_cols=6 Identities=100% Similarity=1.586 Sum_probs=5.2
Q ss_pred eeccCC
Q 045201 3 RILRPE 8 (66)
Q Consensus 3 RILRP~ 8 (66)
||||||
T Consensus 9 rIlr~e 14 (70)
T 1qp2_A 9 RILRPE 14 (70)
T ss_dssp EECCTT
T ss_pred EEcCcc
Confidence 789987
No 219
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=35.85 E-value=17 Score=24.82 Aligned_cols=53 Identities=21% Similarity=0.221 Sum_probs=28.9
Q ss_pred eeccCCcEEEEEc-----CHHHHHHHHhhhccCCceeEEeecCC----CCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIRD-----QADVLVKVRKIVGGMRWNTKIIDHED----GPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiRD-----~~~vi~~v~~i~~~l~W~~~~~~~e~----~~~~~e~iLi~~K~ 55 (66)
+.|+|+|.+++=- ..+--.++++.+..-.|-..+..... +.....-|++.+|+
T Consensus 244 ~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii~lp~~~F~~~~~~~~i~vl~k~ 305 (344)
T 2f8l_A 244 RYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFKSEQARKSILILEKA 305 (344)
T ss_dssp HTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEEECCGGGSCC-CCCEEEEEEEEC
T ss_pred HHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEeeeCChhhccCCCCceEEEEEECC
Confidence 5789999887764 22234666666655445322222221 11234667777774
No 220
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=35.61 E-value=14 Score=25.81 Aligned_cols=13 Identities=8% Similarity=-0.043 Sum_probs=11.0
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
+.|+|||+++|.+
T Consensus 188 ~~L~PGG~Lvls~ 200 (277)
T 3giw_A 188 EPLPSGSYLAMSI 200 (277)
T ss_dssp TTSCTTCEEEEEE
T ss_pred HhCCCCcEEEEEe
Confidence 4599999999983
No 221
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=35.32 E-value=12 Score=25.42 Aligned_cols=13 Identities=31% Similarity=0.411 Sum_probs=11.3
Q ss_pred eeccC---CcEEEEEc
Q 045201 3 RILRP---EGAVIIRD 15 (66)
Q Consensus 3 RILRP---~G~vIiRD 15 (66)
|.|+| ||.++|-|
T Consensus 273 ~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 273 EAVTNDGKRGKVTIID 288 (352)
T ss_dssp HHHSGGGCCCEEEEEE
T ss_pred HhCCCCCCCcEEEEEE
Confidence 67999 99999876
No 222
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=34.96 E-value=18 Score=25.16 Aligned_cols=36 Identities=17% Similarity=0.150 Sum_probs=27.1
Q ss_pred eeccCCcEEEEEcC---HHHHHHHHhhhccCCceeEEee
Q 045201 3 RILRPEGAVIIRDQ---ADVLVKVRKIVGGMRWNTKIID 38 (66)
Q Consensus 3 RILRP~G~vIiRD~---~~vi~~v~~i~~~l~W~~~~~~ 38 (66)
+.|+|||.+|+-|- +.+..-+.++.....+...+..
T Consensus 232 p~L~pGGiIv~DD~~~~~G~~~Av~Ef~~~~~i~~~i~~ 270 (282)
T 2wk1_A 232 PKVSVGGYVIVDDYMMCPPCKDAVDEYRAKFDIADELIT 270 (282)
T ss_dssp GGEEEEEEEEESSCTTCHHHHHHHHHHHHHTTCCSCCEE
T ss_pred hhcCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCceEEEE
Confidence 35899999999883 6677778888888887766543
No 223
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=34.92 E-value=3.3 Score=29.09 Aligned_cols=13 Identities=38% Similarity=0.682 Sum_probs=10.9
Q ss_pred ceeccCCcEEEEE
Q 045201 2 DRILRPEGAVIIR 14 (66)
Q Consensus 2 DRILRP~G~vIiR 14 (66)
+|.|+|||.+|+.
T Consensus 156 ~~~LkpgG~li~~ 168 (376)
T 3r0q_C 156 DRWLKPTGVMYPS 168 (376)
T ss_dssp HHHEEEEEEEESS
T ss_pred HhhCCCCeEEEEe
Confidence 5889999999874
No 224
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=34.50 E-value=30 Score=23.70 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=27.4
Q ss_pred eeccCCcEEEEEcCHH-----HHHHHHhhhccCCceeEEeecC---CCCcCcceEEEEEe
Q 045201 3 RILRPEGAVIIRDQAD-----VLVKVRKIVGGMRWNTKIIDHE---DGPLVTEKILFAVK 54 (66)
Q Consensus 3 RILRP~G~vIiRD~~~-----vi~~v~~i~~~l~W~~~~~~~e---~~~~~~e~iLi~~K 54 (66)
++|+|+|.+++=-... ...++++.+..-.+ ..+.... .+....--+|+++|
T Consensus 152 ~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~-~~i~~l~~~F~~~~~~~~il~~~k 210 (421)
T 2ih2_A 152 RLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK-TSVYYLGEVFPQKKVSAVVIRFQK 210 (421)
T ss_dssp HHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE-EEEEEEESCSTTCCCCEEEEEEES
T ss_pred HHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC-eEEEECCCCCCCCCccEEEEEEEe
Confidence 5799999876643332 34667776665555 2222211 12222345666666
No 225
>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}
Probab=34.45 E-value=13 Score=22.42 Aligned_cols=14 Identities=43% Similarity=0.902 Sum_probs=12.1
Q ss_pred eecc---CCcEEEEEcC
Q 045201 3 RILR---PEGAVIIRDQ 16 (66)
Q Consensus 3 RILR---P~G~vIiRD~ 16 (66)
++|+ |.|.++||++
T Consensus 25 ~lL~~~g~~G~FLVR~S 41 (125)
T 2ge9_A 25 QLLKQEGKEGGFIVRDS 41 (125)
T ss_dssp HHHHHHTCTTEEEEEEC
T ss_pred HHHhhcCCCceEEEEec
Confidence 3677 8999999999
No 226
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=33.38 E-value=7.5 Score=25.77 Aligned_cols=12 Identities=17% Similarity=0.609 Sum_probs=10.3
Q ss_pred eeccCCcEEEEE
Q 045201 3 RILRPEGAVIIR 14 (66)
Q Consensus 3 RILRP~G~vIiR 14 (66)
|.|+|||.+++-
T Consensus 199 ~~LkpgG~lv~s 210 (274)
T 3ajd_A 199 DLLKKDGELVYS 210 (274)
T ss_dssp HHEEEEEEEEEE
T ss_pred HhCCCCCEEEEE
Confidence 579999999984
No 227
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=32.95 E-value=56 Score=17.70 Aligned_cols=28 Identities=11% Similarity=0.301 Sum_probs=23.8
Q ss_pred EEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 10 AVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 10 ~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
.+|+-|+......++.++....+++...
T Consensus 6 ilivdd~~~~~~~l~~~L~~~g~~v~~~ 33 (127)
T 3i42_A 6 ALIVEDYQAAAETFKELLEMLGFQADYV 33 (127)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 5788899999999999999998877654
No 228
>2wsc_E PSAE, PSI-E A, photosystem I reaction center subunit IV A, chloroplastic; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Arabidopsis thaliana} PDB: 2wse_E* 2wsf_E* 2o01_E* 3lw5_E*
Probab=32.72 E-value=9.6 Score=24.95 Aligned_cols=8 Identities=50% Similarity=0.679 Sum_probs=6.4
Q ss_pred eeccCCcE
Q 045201 3 RILRPEGA 10 (66)
Q Consensus 3 RILRP~G~ 10 (66)
||||||-|
T Consensus 88 rIlR~ESY 95 (143)
T 2wsc_E 88 KILRRESY 95 (143)
T ss_dssp CCCSSSST
T ss_pred EEccccce
Confidence 89999854
No 229
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=31.93 E-value=8.2 Score=26.06 Aligned_cols=15 Identities=27% Similarity=0.326 Sum_probs=12.3
Q ss_pred eeccCCcEEEEEcCH
Q 045201 3 RILRPEGAVIIRDQA 17 (66)
Q Consensus 3 RILRP~G~vIiRD~~ 17 (66)
|.|+|||.+++-...
T Consensus 163 ~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 163 TQLKEGGRVIVPINL 177 (317)
T ss_dssp HHEEEEEEEEEEBCB
T ss_pred HhcCCCcEEEEEECC
Confidence 679999999997543
No 230
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=31.73 E-value=15 Score=27.09 Aligned_cols=13 Identities=8% Similarity=0.028 Sum_probs=11.7
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
|.|+|||.+++-|
T Consensus 347 r~LKpGG~lVi~d 359 (433)
T 1u2z_A 347 QTAKVGCKIISLK 359 (433)
T ss_dssp TTCCTTCEEEESS
T ss_pred HhCCCCeEEEEee
Confidence 7899999999976
No 231
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=31.53 E-value=5.2 Score=27.68 Aligned_cols=11 Identities=27% Similarity=0.504 Sum_probs=9.8
Q ss_pred ceeccCCcEEE
Q 045201 2 DRILRPEGAVI 12 (66)
Q Consensus 2 DRILRP~G~vI 12 (66)
.|.|+|||.+|
T Consensus 158 ~~~LkpgG~li 168 (340)
T 2fyt_A 158 NKYLAKGGSVY 168 (340)
T ss_dssp HHHEEEEEEEE
T ss_pred HhhcCCCcEEE
Confidence 58899999998
No 232
>1ev7_A Type IIE restriction endonuclease NAEI; APO-NAEI, topoisomerase, helix- turn-helix, CAP, hydrolase; 2.38A {Lechevalieria aerocolonigenes} SCOP: c.52.1.9 PDB: 1iaw_A
Probab=31.30 E-value=14 Score=26.98 Aligned_cols=50 Identities=24% Similarity=0.500 Sum_probs=28.8
Q ss_pred eccCCcEEEEEcCHHHHHHHHhhhccCCce---------eEEeecCCCCcCcceEEEEEecceec
Q 045201 4 ILRPEGAVIIRDQADVLVKVRKIVGGMRWN---------TKIIDHEDGPLVTEKILFAVKRYWVT 59 (66)
Q Consensus 4 ILRP~G~vIiRD~~~vi~~v~~i~~~l~W~---------~~~~~~e~~~~~~e~iLi~~K~~W~~ 59 (66)
+|||||.+|+.+-. .=.++|.+|.-- +++...+.+- .+.-....-++|+.
T Consensus 240 ~L~pEGi~iLG~~~----~hr~lA~~Lglp~p~~gefvSvrl~~~~~~~--~~~~~~i~G~~W~~ 298 (317)
T 1ev7_A 240 ILRPEGIIILGHQD----NDPKVANDLGLPVPRKGQVVAARVVPADEGD--QRQTAEIQGRRWAV 298 (317)
T ss_dssp SSGGGTEEEECSCC-------CTTCCSSSCCCCSSCEEEEEEEECCSSC--SSCEEESSSSEEEE
T ss_pred hhccccEEEecCCc----chHHHHHHcCCCCCCCCCeEEEEeeccCCCC--CCceEEEcCcEEEE
Confidence 69999999995542 234466666543 2343333332 23466667778875
No 233
>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation, binding specificity; HET: PTR MPD; 1.45A {Homo sapiens} PDB: 1z3k_A 2ci9_A* 2ci8_A*
Probab=31.13 E-value=16 Score=21.05 Aligned_cols=28 Identities=21% Similarity=0.279 Sum_probs=18.0
Q ss_pred eecc---CCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 3 RILR---PEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILR---P~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
++|+ |.|.++||++...- ..++-+++++
T Consensus 19 ~lL~~~~~~G~FLVR~S~~~~---g~~~LSv~~~ 49 (102)
T 2cia_A 19 CALNERGVEGDFLIRDSESSP---SDFSVSLKAS 49 (102)
T ss_dssp HHHHHHCCTTEEEEEECSSST---TCEEEEECCS
T ss_pred HHHhhCCCCcEEEEEECCCCC---CCEEEEEEeC
Confidence 3564 89999999986431 1345555553
No 234
>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET: PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A* 1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L* 1cwe_A*
Probab=30.41 E-value=16 Score=20.81 Aligned_cols=23 Identities=17% Similarity=0.266 Sum_probs=15.4
Q ss_pred CCcEEEEEcCHHHHHHHHhhhccCCc
Q 045201 7 PEGAVIIRDQADVLVKVRKIVGGMRW 32 (66)
Q Consensus 7 P~G~vIiRD~~~vi~~v~~i~~~l~W 32 (66)
|.|.++||++...- ..++-++++
T Consensus 26 ~~G~FLVR~S~~~~---g~~~LSv~~ 48 (105)
T 1lkk_A 26 THGSFLIRESESTA---GSFSLSVRD 48 (105)
T ss_dssp CTTCEEEEECSSST---TCEEEEEEE
T ss_pred CCceEEEEECCCCC---CcEEEEEEE
Confidence 88999999986421 134555555
No 235
>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1ka7_A
Probab=30.25 E-value=14 Score=22.28 Aligned_cols=28 Identities=18% Similarity=0.311 Sum_probs=18.0
Q ss_pred eecc---CCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 3 RILR---PEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RILR---P~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
++|+ |.|.++||++...- ..++-+++++
T Consensus 18 ~lL~~~~~~G~FLVR~S~~~~---g~y~LSv~~~ 48 (128)
T 1ka6_A 18 KLLLATGLDGSYLLRDSESVP---GVYCLCVLYH 48 (128)
T ss_dssp HHHHHHCCTTCEEEEECSSST---TCEEEEEESS
T ss_pred HHHhcCCCCCEEEEeecCCCC---CCEEEEEEeC
Confidence 3576 89999999986321 1345555554
No 236
>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A
Probab=30.09 E-value=20 Score=20.96 Aligned_cols=27 Identities=11% Similarity=0.284 Sum_probs=17.6
Q ss_pred eec--cCCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 3 RIL--RPEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 3 RIL--RP~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
++| .|.|.++||++ .. -..++-+++++
T Consensus 24 ~lL~~~~~G~FLVR~S-~~---~g~y~LSv~~~ 52 (112)
T 1h9o_A 24 NLLRGKRDGTFLVRES-SK---QGCYACSVVVD 52 (112)
T ss_dssp HHHTTCCTTEEEEEEC-SS---TTCEEEEEEET
T ss_pred HHhcCCCCceEEEeec-CC---CCCEEEEEEEC
Confidence 356 59999999998 42 12455555554
No 237
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=29.57 E-value=69 Score=17.62 Aligned_cols=28 Identities=7% Similarity=0.092 Sum_probs=23.7
Q ss_pred EEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 10 AVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 10 ~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
.+|+-|+......++.++....+++...
T Consensus 21 ilivdd~~~~~~~l~~~L~~~g~~v~~~ 48 (137)
T 2pln_A 21 VLLIEKNSVLGGEIEKGLNVKGFMADVT 48 (137)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCcEEEEe
Confidence 5788899999999999999988877644
No 238
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=29.57 E-value=9.5 Score=25.74 Aligned_cols=12 Identities=42% Similarity=0.811 Sum_probs=10.0
Q ss_pred eeccCCcEEEEE
Q 045201 3 RILRPEGAVIIR 14 (66)
Q Consensus 3 RILRP~G~vIiR 14 (66)
|+|+|+|.+++-
T Consensus 85 rvLk~~G~l~i~ 96 (297)
T 2zig_A 85 RLLVPGGRLVIV 96 (297)
T ss_dssp HHEEEEEEEEEE
T ss_pred HHcCCCcEEEEE
Confidence 789999998664
No 239
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=29.29 E-value=77 Score=17.52 Aligned_cols=29 Identities=10% Similarity=0.158 Sum_probs=24.7
Q ss_pred cEEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 9 GAVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 9 G~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
-.+|+-|+..+...++.++....+++...
T Consensus 8 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~ 36 (136)
T 3kto_A 8 IIYLVDHQKDARAALSKLLSPLDVTIQCF 36 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSSSEEEEE
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCcEEEEe
Confidence 46788999999999999999998887654
No 240
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=29.17 E-value=6 Score=27.09 Aligned_cols=11 Identities=27% Similarity=0.449 Sum_probs=9.7
Q ss_pred ceeccCCcEEE
Q 045201 2 DRILRPEGAVI 12 (66)
Q Consensus 2 DRILRP~G~vI 12 (66)
+|.|+|||.+|
T Consensus 132 ~~~LkpgG~li 142 (328)
T 1g6q_1 132 DHYLVEGGLIF 142 (328)
T ss_dssp HHHEEEEEEEE
T ss_pred HhhcCCCeEEE
Confidence 57899999997
No 241
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=29.06 E-value=9.9 Score=26.87 Aligned_cols=26 Identities=35% Similarity=0.584 Sum_probs=16.3
Q ss_pred eeccCCcEEEE--EcCHHHHHHHHhhhc
Q 045201 3 RILRPEGAVII--RDQADVLVKVRKIVG 28 (66)
Q Consensus 3 RILRP~G~vIi--RD~~~vi~~v~~i~~ 28 (66)
|.|+|||.++| ......-..++++..
T Consensus 322 ~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 322 RCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp HHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred HhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 68999999998 333334444444433
No 242
>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform; adapter protein, signaling protein; 2.00A {Mus musculus} PDB: 2hdx_A* 1rpy_A 1rqq_C*
Probab=28.82 E-value=17 Score=21.33 Aligned_cols=24 Identities=13% Similarity=0.256 Sum_probs=16.1
Q ss_pred CCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 7 PEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 7 P~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
|.|.++||++...- -.++-+++++
T Consensus 32 ~~G~FLVR~S~~~~---g~y~LSv~~~ 55 (111)
T 2hdv_A 32 SHGVFLVRQSETRR---GECVLTFNFQ 55 (111)
T ss_dssp GTTEEEEEECSSCT---TEEEEEEEET
T ss_pred CCCeEEEEecCCCC---CCEEEEEEeC
Confidence 89999999986432 1255556654
No 243
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=28.74 E-value=71 Score=17.60 Aligned_cols=30 Identities=3% Similarity=0.246 Sum_probs=25.3
Q ss_pred EEEEEcCHHHHHHHHhhhccCC-ceeEEeec
Q 045201 10 AVIIRDQADVLVKVRKIVGGMR-WNTKIIDH 39 (66)
Q Consensus 10 ~vIiRD~~~vi~~v~~i~~~l~-W~~~~~~~ 39 (66)
.+|+-|+..+...++.++.... +++....+
T Consensus 17 ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~ 47 (135)
T 3snk_A 17 VALFSSDPNFKRDVATRLDALAIYDVRVSET 47 (135)
T ss_dssp EEEECSCHHHHHHHHHHHHHTSSEEEEEECG
T ss_pred EEEEcCCHHHHHHHHHHHhhcCCeEEEEecc
Confidence 6788999999999999999998 88775533
No 244
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=28.60 E-value=84 Score=17.75 Aligned_cols=29 Identities=7% Similarity=0.330 Sum_probs=24.6
Q ss_pred cEEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 9 GAVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 9 G~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
-.+||-|+..+...++.++....+++...
T Consensus 16 ~ILivdd~~~~~~~l~~~L~~~g~~v~~~ 44 (153)
T 3hv2_A 16 EILLVDSQEVILQRLQQLLSPLPYTLHFA 44 (153)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSSCEEEEE
T ss_pred eEEEECCCHHHHHHHHHHhcccCcEEEEE
Confidence 36788999999999999999998887654
No 245
>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1, solution structure, cell junctio membrane, hydrolase, membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A
Probab=28.33 E-value=20 Score=21.84 Aligned_cols=15 Identities=40% Similarity=0.744 Sum_probs=12.3
Q ss_pred ec--cCCcEEEEEcCHH
Q 045201 4 IL--RPEGAVIIRDQAD 18 (66)
Q Consensus 4 IL--RP~G~vIiRD~~~ 18 (66)
+| +|.|.++||++..
T Consensus 35 lL~~~~~G~FLVR~S~s 51 (131)
T 2kno_A 35 LLKDKDPGAFLIRDSHS 51 (131)
T ss_dssp HHTTSCTTBEEEEECSS
T ss_pred HhcCCCCCeEEEecCCC
Confidence 45 5899999999864
No 246
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=27.80 E-value=80 Score=17.23 Aligned_cols=29 Identities=17% Similarity=0.230 Sum_probs=24.3
Q ss_pred cEEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 9 GAVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 9 G~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
-.+|+-|+......++.++....+++...
T Consensus 5 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~ 33 (140)
T 2qr3_A 5 TIIIVDDNKGVLTAVQLLLKNHFSKVITL 33 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHTTTSSEEEEE
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCcEEEEe
Confidence 35788999999999999999988877644
No 247
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=27.19 E-value=51 Score=22.77 Aligned_cols=32 Identities=9% Similarity=0.075 Sum_probs=18.3
Q ss_pred eeccCCcEE-EEE-----cCHHHHHHHHhhhc-cCCcee
Q 045201 3 RILRPEGAV-IIR-----DQADVLVKVRKIVG-GMRWNT 34 (66)
Q Consensus 3 RILRP~G~v-IiR-----D~~~vi~~v~~i~~-~l~W~~ 34 (66)
|.|+|||.+ ++- .+......+++++. .+....
T Consensus 265 ~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 265 ATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp HTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEE
T ss_pred HHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcch
Confidence 689999933 332 23322356666665 555543
No 248
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=26.95 E-value=82 Score=17.05 Aligned_cols=28 Identities=4% Similarity=0.069 Sum_probs=23.3
Q ss_pred EEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 10 AVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 10 ~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
.+|+-|+..+...++.++....+++...
T Consensus 5 ilivdd~~~~~~~l~~~L~~~g~~v~~~ 32 (120)
T 3f6p_A 5 ILVVDDEKPIADILEFNLRKEGYEVHCA 32 (120)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHhCCEEEEEe
Confidence 5688899999999999999888887644
No 249
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=26.89 E-value=85 Score=17.24 Aligned_cols=29 Identities=10% Similarity=0.266 Sum_probs=24.3
Q ss_pred cEEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 9 GAVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 9 G~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
-.+|+-|+......++.++....+++...
T Consensus 8 ~iLivdd~~~~~~~l~~~l~~~g~~v~~~ 36 (140)
T 3grc_A 8 RILICEDDPDIARLLNLMLEKGGFDSDMV 36 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEcCCHHHHHHHHHHHHHCCCeEEEE
Confidence 46788999999999999999988886554
No 250
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=26.58 E-value=79 Score=16.76 Aligned_cols=28 Identities=7% Similarity=0.094 Sum_probs=22.6
Q ss_pred EEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 10 AVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 10 ~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
.+|+-|+......++.++....|++...
T Consensus 3 ilivdd~~~~~~~l~~~l~~~g~~v~~~ 30 (121)
T 2pl1_A 3 VLVVEDNALLRHHLKVQIQDAGHQVDDA 30 (121)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCcHHHHHHHHHHHhhcCCEEEEe
Confidence 4678888989999999998888876544
No 251
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=26.49 E-value=77 Score=17.16 Aligned_cols=29 Identities=10% Similarity=0.426 Sum_probs=23.9
Q ss_pred cEEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 9 GAVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 9 G~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
-.+|+-|+......++.++....+++...
T Consensus 8 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~ 36 (132)
T 3lte_A 8 RILVVDDDQAMAAAIERVLKRDHWQVEIA 36 (132)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEECCHHHHHHHHHHHHHCCcEEEEe
Confidence 35788889999999999999888877654
No 252
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=26.48 E-value=12 Score=26.66 Aligned_cols=14 Identities=29% Similarity=0.532 Sum_probs=11.6
Q ss_pred eeccCCcEEEEEcC
Q 045201 3 RILRPEGAVIIRDQ 16 (66)
Q Consensus 3 RILRP~G~vIiRD~ 16 (66)
|.|+|||.++|--.
T Consensus 328 ~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 328 ARLRPGGVFFLVSN 341 (381)
T ss_dssp HHEEEEEEEEEEEC
T ss_pred HhcCcCcEEEEEEc
Confidence 68999999999643
No 253
>4av2_A PILQ, type IV pilus biogenesis and competence protein P; protein transport, outer membrane protein; 26.00A {Neisseria meningitidis MC58}
Probab=26.39 E-value=27 Score=27.27 Aligned_cols=23 Identities=26% Similarity=0.547 Sum_probs=20.2
Q ss_pred CcEEEEEcCHHHHHHHHhhhccC
Q 045201 8 EGAVIIRDQADVLVKVRKIVGGM 30 (66)
Q Consensus 8 ~G~vIiRD~~~vi~~v~~i~~~l 30 (66)
.+.+||+|+++.+++++++++.|
T Consensus 463 tNsLiV~~tp~~l~~i~~lI~~L 485 (745)
T 4av2_A 463 TNTLIVTDTRSVIEKFRKLIDEL 485 (745)
T ss_dssp TTEEEEEEEHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCHHHHHHHHHhhhhh
Confidence 36899999999999999998765
No 254
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=26.26 E-value=12 Score=26.50 Aligned_cols=54 Identities=15% Similarity=0.174 Sum_probs=28.9
Q ss_pred eeccCCcEEEEEcC--H--HHHH-HHHhhhccCCceeEEee-cC--CCCcCcceEEEEEecce
Q 045201 3 RILRPEGAVIIRDQ--A--DVLV-KVRKIVGGMRWNTKIID-HE--DGPLVTEKILFAVKRYW 57 (66)
Q Consensus 3 RILRP~G~vIiRD~--~--~vi~-~v~~i~~~l~W~~~~~~-~e--~~~~~~e~iLi~~K~~W 57 (66)
|.|+|||.+++.-. . ..+. .++.+...+. .+.+.. .. .|.....-||+|.|.-.
T Consensus 188 r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g~~~gN~Vl~As~~pl 249 (317)
T 3gjy_A 188 RGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFE-HVAVIADPPMLKGRRYGNIILMGSDTEF 249 (317)
T ss_dssp HHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCS-EEEEEECHHHHTTSSCEEEEEEEESSCC
T ss_pred HhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCC-ceEEEEecCCCCCCcCceEEEEEECCCC
Confidence 78999999988653 1 2222 2333333343 333332 11 12223478899988754
No 255
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=26.12 E-value=4.3 Score=25.70 Aligned_cols=14 Identities=29% Similarity=0.548 Sum_probs=11.3
Q ss_pred ceeccCCcEEEEEc
Q 045201 2 DRILRPEGAVIIRD 15 (66)
Q Consensus 2 DRILRP~G~vIiRD 15 (66)
-|.|+|||.+|+..
T Consensus 168 ~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 168 RTMMSPDGFEIFRL 181 (241)
T ss_dssp TTSCSSCHHHHHHH
T ss_pred HhhcCCcceeHHHH
Confidence 47899999987765
No 256
>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine, tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A
Probab=25.65 E-value=35 Score=19.78 Aligned_cols=13 Identities=15% Similarity=0.442 Sum_probs=10.9
Q ss_pred cCCcEEEEEcCHH
Q 045201 6 RPEGAVIIRDQAD 18 (66)
Q Consensus 6 RP~G~vIiRD~~~ 18 (66)
+|.|.++||++..
T Consensus 35 ~~~G~FLVR~S~~ 47 (117)
T 3pqz_A 35 LVDGLFLVRESQR 47 (117)
T ss_dssp CCTTEEEEEECCC
T ss_pred CCCCEEEEEecCC
Confidence 3689999999865
No 257
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=25.47 E-value=20 Score=24.38 Aligned_cols=13 Identities=38% Similarity=0.608 Sum_probs=11.0
Q ss_pred eeccC---CcEEEEEc
Q 045201 3 RILRP---EGAVIIRD 15 (66)
Q Consensus 3 RILRP---~G~vIiRD 15 (66)
|.|+| ||.++|-|
T Consensus 278 ~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 278 EAISHKGKDGKVIIID 293 (358)
T ss_dssp HHTGGGGGGCEEEEEE
T ss_pred HhCCCCCCCcEEEEEE
Confidence 67999 99999965
No 258
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=25.44 E-value=84 Score=17.17 Aligned_cols=29 Identities=7% Similarity=-0.105 Sum_probs=24.4
Q ss_pred cEEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 9 GAVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 9 G~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
-.+|+-|+......++.++....+++...
T Consensus 9 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~ 37 (136)
T 3hdv_A 9 LVLVVDDNAVNREALILYLKSRGIDAVGA 37 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEECCCHHHHHHHHHHHHHcCceEEEe
Confidence 46788999999999999999988877654
No 259
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=25.43 E-value=26 Score=22.26 Aligned_cols=13 Identities=8% Similarity=0.010 Sum_probs=10.1
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
++++|||.+++-+
T Consensus 147 ~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 147 NMAAVCDHVDVAE 159 (275)
T ss_dssp HHTTTCSEEEEEE
T ss_pred HHhCCCCEEEEEE
Confidence 4567799999964
No 260
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=25.40 E-value=1.4e+02 Score=20.87 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=28.6
Q ss_pred eeccCCcEEEEE------cCHHHHHHHHhhhccCCceeEEeecC--CCCcCcceEEEEEec
Q 045201 3 RILRPEGAVIIR------DQADVLVKVRKIVGGMRWNTKIIDHE--DGPLVTEKILFAVKR 55 (66)
Q Consensus 3 RILRP~G~vIiR------D~~~vi~~v~~i~~~l~W~~~~~~~e--~~~~~~e~iLi~~K~ 55 (66)
|.|+|+|.++.+ +...+..-.+.+...+. .+.....- .-+.+.-.+.+|.|+
T Consensus 186 ~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~-~v~~~~~~vPty~~g~w~f~~as~~ 245 (294)
T 3o4f_A 186 RCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFS-DVGFYQAAIPTYYGGIMTFAWATDN 245 (294)
T ss_dssp HTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCS-EEEEEEECCTTSSSSCEEEEEEESC
T ss_pred HHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCC-ceeeeeeeeccCCCcceeheeEECC
Confidence 789999999987 33344444444444443 23322111 112235678888875
No 261
>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide complex, cytokine regulator; HET: PTR; 2.00A {Mus musculus}
Probab=25.38 E-value=22 Score=22.20 Aligned_cols=15 Identities=47% Similarity=0.970 Sum_probs=12.3
Q ss_pred ecc--CCcEEEEEcCHH
Q 045201 4 ILR--PEGAVIIRDQAD 18 (66)
Q Consensus 4 ILR--P~G~vIiRD~~~ 18 (66)
+|+ |.|.++|||+..
T Consensus 49 lL~~~~~G~FLVR~S~~ 65 (152)
T 2hmh_A 49 LLSAEPAGTFLIRDSSD 65 (152)
T ss_dssp HHHTSCTTEEEEEECCS
T ss_pred HhcCCCCCcEEEEeCCC
Confidence 554 899999999864
No 262
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=24.94 E-value=29 Score=24.22 Aligned_cols=32 Identities=6% Similarity=0.009 Sum_probs=20.0
Q ss_pred eeccCCcEEEEEcCH------HHHHHHHhhhccCCcee
Q 045201 3 RILRPEGAVIIRDQA------DVLVKVRKIVGGMRWNT 34 (66)
Q Consensus 3 RILRP~G~vIiRD~~------~vi~~v~~i~~~l~W~~ 34 (66)
++|+|||.+++-... +..+.+++.+...+.+.
T Consensus 327 ~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 327 QLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDV 364 (396)
T ss_dssp HTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCE
T ss_pred HhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeE
Confidence 579999999996543 34455555555444433
No 263
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=24.76 E-value=18 Score=24.03 Aligned_cols=13 Identities=8% Similarity=0.092 Sum_probs=10.1
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
+.|||||.+|+-|
T Consensus 142 ~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 142 FSITRPVTLLFDD 154 (202)
T ss_dssp HHCSSCEEEEETT
T ss_pred HhcCCCeEEEEeC
Confidence 3589999887765
No 264
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=24.51 E-value=11 Score=25.98 Aligned_cols=13 Identities=23% Similarity=0.593 Sum_probs=10.6
Q ss_pred ceeccCCcEEEEE
Q 045201 2 DRILRPEGAVIIR 14 (66)
Q Consensus 2 DRILRP~G~vIiR 14 (66)
-|.|+|||.+++.
T Consensus 142 ~~~LkpgG~li~~ 154 (348)
T 2y1w_A 142 KKYLKPSGNMFPT 154 (348)
T ss_dssp GGGEEEEEEEESC
T ss_pred HhhcCCCeEEEEe
Confidence 4789999999853
No 265
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=24.28 E-value=5.1 Score=25.71 Aligned_cols=11 Identities=18% Similarity=0.365 Sum_probs=5.6
Q ss_pred eeccCCcEEEE
Q 045201 3 RILRPEGAVII 13 (66)
Q Consensus 3 RILRP~G~vIi 13 (66)
|+|+|||.+.+
T Consensus 180 ~~LkpgG~l~~ 190 (254)
T 2h00_A 180 EIMAEGGELEF 190 (254)
T ss_dssp TTHHHHTHHHH
T ss_pred HHEecCCEEEE
Confidence 45555554433
No 266
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=23.81 E-value=93 Score=20.66 Aligned_cols=48 Identities=15% Similarity=0.094 Sum_probs=33.9
Q ss_pred eccCCcEEEEEcCHHHHHHHHhhhccCCceeEEee--cCCCCcCcceEEEEEe
Q 045201 4 ILRPEGAVIIRDQADVLVKVRKIVGGMRWNTKIID--HEDGPLVTEKILFAVK 54 (66)
Q Consensus 4 ILRP~G~vIiRD~~~vi~~v~~i~~~l~W~~~~~~--~e~~~~~~e~iLi~~K 54 (66)
.|.|+|++|+.-. .-..++++.+....|...-.. .|++ .-..||.+.+
T Consensus 108 ~L~~~~~lVlq~~-~~~~~vr~~L~~~Gf~i~~e~lv~e~~--~~Yeii~~~~ 157 (225)
T 3kr9_A 108 KLANVERLILQPN-NREDDLRIWLQDHGFQIVAESILEEAG--KFYEILVVEA 157 (225)
T ss_dssp GCTTCCEEEEEES-SCHHHHHHHHHHTTEEEEEEEEEEETT--EEEEEEEEEE
T ss_pred HhCCCCEEEEECC-CCHHHHHHHHHHCCCEEEEEEEEEECC--EEEEEEEEEe
Confidence 5789999999877 567899999999999864322 2222 1255777765
No 267
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=23.80 E-value=1e+02 Score=17.08 Aligned_cols=36 Identities=14% Similarity=0.195 Sum_probs=27.6
Q ss_pred ccCCc-EEEEEcCHHHHHHHHhhhccCCceeEEeecC
Q 045201 5 LRPEG-AVIIRDQADVLVKVRKIVGGMRWNTKIIDHE 40 (66)
Q Consensus 5 LRP~G-~vIiRD~~~vi~~v~~i~~~l~W~~~~~~~e 40 (66)
|.||. ..|+=|++....-|..+++...+++.....+
T Consensus 34 l~~G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~~~~ 70 (82)
T 3lvj_C 34 MQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETD 70 (82)
T ss_dssp SCTTCEEEEEECCTTHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCCCEEEEEECCccHHHHHHHHHHHCCCEEEEEEec
Confidence 34665 4677788999999999999999987655433
No 268
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=23.74 E-value=67 Score=18.35 Aligned_cols=27 Identities=7% Similarity=0.304 Sum_probs=18.2
Q ss_pred eccCCcEEEEE-----cCHHHHHHHHhhhccC
Q 045201 4 ILRPEGAVIIR-----DQADVLVKVRKIVGGM 30 (66)
Q Consensus 4 ILRP~G~vIiR-----D~~~vi~~v~~i~~~l 30 (66)
++-|+|.++-+ +..++...++++++..
T Consensus 132 lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 163 (164)
T 2ggt_A 132 LIGPDGEFLDYFGQNKRKGEIAASIATHMRPY 163 (164)
T ss_dssp EECTTSCEEEEEETTCCHHHHHHHHHHHHGGG
T ss_pred EECCCCeEEEEeCCCCCHHHHHHHHHHHHHhc
Confidence 35577877766 3456777888877654
No 269
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=23.62 E-value=1e+02 Score=16.96 Aligned_cols=29 Identities=7% Similarity=0.153 Sum_probs=24.3
Q ss_pred cEEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 9 GAVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 9 G~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
-.+|+-|+......++.++....+++...
T Consensus 6 ~iLivdd~~~~~~~l~~~L~~~g~~v~~~ 34 (142)
T 2qxy_A 6 TVMVVDESRITFLAVKNALEKDGFNVIWA 34 (142)
T ss_dssp EEEEECSCHHHHHHHHHHHGGGTCEEEEE
T ss_pred eEEEEeCCHHHHHHHHHHHHhCCCEEEEE
Confidence 35788999999999999999988887644
No 270
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=23.32 E-value=47 Score=25.05 Aligned_cols=28 Identities=14% Similarity=0.413 Sum_probs=21.7
Q ss_pred eccCCcEEEEEcCHHHHHHHHhhhccCC
Q 045201 4 ILRPEGAVIIRDQADVLVKVRKIVGGMR 31 (66)
Q Consensus 4 ILRP~G~vIiRD~~~vi~~v~~i~~~l~ 31 (66)
++||.|||=.|-..+-...+..++.++-
T Consensus 618 lvRPD~yV~~~~~~~~~~~l~~~~~~~~ 645 (665)
T 1pn0_A 618 VVRPDGYTSLVTDLEGTAEIDRYFSGIL 645 (665)
T ss_dssp EECTTSBEEEEECTTTHHHHHHHHHTTB
T ss_pred EECCCCcEEEEeccccHHHHHHHHHHHh
Confidence 6799999999866655677887777664
No 271
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=23.24 E-value=1.1e+02 Score=17.04 Aligned_cols=31 Identities=16% Similarity=0.344 Sum_probs=25.1
Q ss_pred CCcEEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 7 PEGAVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 7 P~G~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
|.-.+|+-|+..+...++.++....+++...
T Consensus 4 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~ 34 (136)
T 3t6k_A 4 PHTLLIVDDDDTVAEMLELVLRGAGYEVRRA 34 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEe
Confidence 3446788999999999999999888877644
No 272
>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase, phosphotransferase, phosphorylation; NMR {Mus musculus} SCOP: d.93.1.1 PDB: 1blk_A
Probab=23.23 E-value=17 Score=21.06 Aligned_cols=12 Identities=25% Similarity=0.614 Sum_probs=10.6
Q ss_pred CCcEEEEEcCHH
Q 045201 7 PEGAVIIRDQAD 18 (66)
Q Consensus 7 P~G~vIiRD~~~ 18 (66)
|.|.++||++..
T Consensus 34 ~~G~FLVR~S~~ 45 (114)
T 1blj_A 34 KAGSFLIRESES 45 (114)
T ss_dssp CTTCEEBCBCTT
T ss_pred CCceEEEEeCCC
Confidence 889999999864
No 273
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=23.04 E-value=12 Score=26.97 Aligned_cols=11 Identities=18% Similarity=0.495 Sum_probs=9.2
Q ss_pred ceeccCCcEEE
Q 045201 2 DRILRPEGAVI 12 (66)
Q Consensus 2 DRILRP~G~vI 12 (66)
||.|+|+|.+|
T Consensus 176 ~r~Lkp~G~~i 186 (376)
T 4hc4_A 176 TKWLKEGGLLL 186 (376)
T ss_dssp HHHEEEEEEEE
T ss_pred HhhCCCCceEC
Confidence 68899999876
No 274
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=23.00 E-value=28 Score=25.80 Aligned_cols=22 Identities=23% Similarity=0.536 Sum_probs=15.2
Q ss_pred eeccCCcEEEEE-------cCHHHHHHHH
Q 045201 3 RILRPEGAVIIR-------DQADVLVKVR 24 (66)
Q Consensus 3 RILRP~G~vIiR-------D~~~vi~~v~ 24 (66)
|.|+|||.+++- +..+++..+.
T Consensus 217 ~~LkpGG~LvysTCs~~~eEne~vv~~~l 245 (464)
T 3m6w_A 217 RLLGPGGVLVYSTCTFAPEENEGVVAHFL 245 (464)
T ss_dssp TTEEEEEEEEEEESCCCGGGTHHHHHHHH
T ss_pred HhcCCCcEEEEEeccCchhcCHHHHHHHH
Confidence 579999999983 4555555543
No 275
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=22.88 E-value=89 Score=16.08 Aligned_cols=28 Identities=4% Similarity=0.224 Sum_probs=23.0
Q ss_pred EEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 10 AVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 10 ~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
.+|+-|+......++.++....+++...
T Consensus 4 iliv~~~~~~~~~l~~~l~~~g~~v~~~ 31 (119)
T 2j48_A 4 ILLLEEEDEAATVVCEMLTAAGFKVIWL 31 (119)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHhCCcEEEEe
Confidence 4688888999999999999888876644
No 276
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=22.84 E-value=81 Score=16.68 Aligned_cols=28 Identities=11% Similarity=0.265 Sum_probs=23.4
Q ss_pred EEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 10 AVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 10 ~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
.+|+-|+......++.++....+++...
T Consensus 8 ilivdd~~~~~~~l~~~L~~~g~~v~~~ 35 (127)
T 2gkg_A 8 ILIVESDTALSATLRSALEGRGFTVDET 35 (127)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHhcCceEEEe
Confidence 5788899999999999999888876544
No 277
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=22.66 E-value=1e+02 Score=16.78 Aligned_cols=28 Identities=11% Similarity=0.012 Sum_probs=23.0
Q ss_pred EEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 10 AVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 10 ~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
.+|+-|+..+...++.++....+++...
T Consensus 5 ILivdd~~~~~~~l~~~l~~~g~~v~~~ 32 (122)
T 3gl9_A 5 VLLVDDSAVLRKIVSFNLKKEGYEVIEA 32 (122)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHCCcEEEEe
Confidence 5688889999999999999888876543
No 278
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=22.62 E-value=1.1e+02 Score=16.96 Aligned_cols=31 Identities=13% Similarity=0.215 Sum_probs=24.9
Q ss_pred CCcEEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 7 PEGAVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 7 P~G~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
+--.+|+-|+..+...++.++....+++...
T Consensus 5 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~ 35 (140)
T 3h5i_A 5 DKKILIVEDSKFQAKTIANILNKYGYTVEIA 35 (140)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEEEeCCHHHHHHHHHHHHHcCCEEEEe
Confidence 3346788999999999999999988887654
No 279
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=22.51 E-value=1.1e+02 Score=16.80 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=25.7
Q ss_pred cCCcEEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 6 RPEGAVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 6 RP~G~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
++--.+|+-|+......++.++....+++...
T Consensus 6 ~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~ 37 (142)
T 3cg4_A 6 HKGDVMIVDDDAHVRIAVKTILSDAGFHIISA 37 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHHCCeEEEEe
Confidence 34446889999999999999999988886654
No 280
>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein; 1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A
Probab=22.49 E-value=44 Score=18.98 Aligned_cols=24 Identities=17% Similarity=0.274 Sum_probs=15.4
Q ss_pred CCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 7 PEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 7 P~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
|.|.++||++...- ..++-+++++
T Consensus 27 ~~G~FLVR~S~~~~---g~~~LSv~~~ 50 (105)
T 1nrv_A 27 VDGLFLLRDSQSNP---KAFVLTLCHH 50 (105)
T ss_dssp CTTEEEEEECSSCT---TCEEEEEEET
T ss_pred CCceEEEEeCCCCC---CCEEEEEEeC
Confidence 78999999986521 2344455553
No 281
>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.50A {Mus musculus}
Probab=22.44 E-value=24 Score=21.55 Aligned_cols=24 Identities=8% Similarity=0.226 Sum_probs=15.8
Q ss_pred CCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 7 PEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 7 P~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
|.|.++||++...- -.++-+++++
T Consensus 49 ~~G~FLVR~S~~~~---g~y~LSv~~~ 72 (138)
T 2dx0_A 49 KDGTFLVRESETFP---NDYTLSFWRS 72 (138)
T ss_dssp CTTCEEEEECSSST---TCEEEEEEET
T ss_pred CCCEEEEEeCCCCC---CCeEEEEEEC
Confidence 89999999986421 2345555553
No 282
>1khi_A HEX1; membrane sealing, peroxisomal target, structural protein; 1.78A {Neurospora crassa} SCOP: b.34.5.2 b.40.4.5
Probab=22.39 E-value=21 Score=24.00 Aligned_cols=14 Identities=14% Similarity=0.299 Sum_probs=11.6
Q ss_pred ccCCcEEEEEcCHH
Q 045201 5 LRPEGAVIIRDQAD 18 (66)
Q Consensus 5 LRP~G~vIiRD~~~ 18 (66)
||.||+|+|.+.+=
T Consensus 40 LrkG~yv~IkGrPC 53 (176)
T 1khi_A 40 IRLGDILILQGRPC 53 (176)
T ss_dssp CCTTCEEEETTEEE
T ss_pred eeeCCEEEECCeee
Confidence 79999999988753
No 283
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=22.29 E-value=1.2e+02 Score=17.24 Aligned_cols=31 Identities=13% Similarity=0.276 Sum_probs=25.4
Q ss_pred CCcEEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 7 PEGAVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 7 P~G~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
+.-.+|+-|+..+...++.++....+++...
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~ 37 (154)
T 3gt7_A 7 AGEILIVEDSPTQAEHLKHILEETGYQTEHV 37 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHCCCEEEEe
Confidence 3446788999999999999999988887654
No 284
>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6 (PTK6/BRK), SRC homology 2(S domain, solution structure, backbone dynamics, transferase; NMR {Homo sapiens} SCOP: d.93.1.1
Probab=21.87 E-value=39 Score=19.10 Aligned_cols=24 Identities=25% Similarity=0.209 Sum_probs=15.3
Q ss_pred CCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 7 PEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 7 P~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
|.|.++||++...- ..++-+++++
T Consensus 24 ~~G~FLVR~S~~~~---g~~~LSv~~~ 47 (100)
T 1rja_A 24 ATGAFLIRVSEKPS---ADYVLSVRDT 47 (100)
T ss_dssp SSCCEEEEECSSSS---SCEEEEECTT
T ss_pred CCCEEEEEeCCCCC---CCEEEEEEEC
Confidence 68999999986421 1344555553
No 285
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=21.77 E-value=1.1e+02 Score=16.51 Aligned_cols=29 Identities=3% Similarity=0.119 Sum_probs=23.4
Q ss_pred cEEEEEcCHHHHHHHHhhhccCCc--eeEEe
Q 045201 9 GAVIIRDQADVLVKVRKIVGGMRW--NTKII 37 (66)
Q Consensus 9 G~vIiRD~~~vi~~v~~i~~~l~W--~~~~~ 37 (66)
-.+|+-|+......++.++....+ .+...
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~~~~~~v~~~ 34 (140)
T 1k68_A 4 KIFLVEDNKADIRLIQEALANSTVPHEVVTV 34 (140)
T ss_dssp EEEEECCCHHHHHHHHHHHHTCSSCCEEEEE
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCCCceEEEE
Confidence 357888999999999999999888 55444
No 286
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=21.73 E-value=19 Score=25.52 Aligned_cols=13 Identities=15% Similarity=0.353 Sum_probs=11.1
Q ss_pred eeccCCcEEEEEc
Q 045201 3 RILRPEGAVIIRD 15 (66)
Q Consensus 3 RILRP~G~vIiRD 15 (66)
+.|+|||.+++-.
T Consensus 362 ~~LkpGG~lvyst 374 (429)
T 1sqg_A 362 PHLKTGGTLVYAT 374 (429)
T ss_dssp GGEEEEEEEEEEE
T ss_pred HhcCCCCEEEEEE
Confidence 6799999999864
No 287
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=21.61 E-value=17 Score=25.06 Aligned_cols=13 Identities=23% Similarity=0.859 Sum_probs=10.9
Q ss_pred ceeccCCcEEEEE
Q 045201 2 DRILRPEGAVIIR 14 (66)
Q Consensus 2 DRILRP~G~vIiR 14 (66)
-|+|+|+|.++|-
T Consensus 71 ~rvLk~~G~i~i~ 83 (323)
T 1boo_A 71 NKKLKPDGSFVVD 83 (323)
T ss_dssp HHHEEEEEEEEEE
T ss_pred HHHCcCCcEEEEE
Confidence 3789999998884
No 288
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=21.03 E-value=18 Score=25.18 Aligned_cols=34 Identities=9% Similarity=0.127 Sum_probs=21.7
Q ss_pred eeccCCcEEEEEcCH------HHHHHHHhhhccCCceeEE
Q 045201 3 RILRPEGAVIIRDQA------DVLVKVRKIVGGMRWNTKI 36 (66)
Q Consensus 3 RILRP~G~vIiRD~~------~vi~~v~~i~~~l~W~~~~ 36 (66)
|+|+|||.+++-... .....+++.+...+.+.++
T Consensus 313 ~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 352 (382)
T 1wxx_A 313 KLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRV 352 (382)
T ss_dssp HTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred HhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 679999999997543 2345555555555554443
No 289
>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal transduction lymphocyte, signaling protein; HET: PTR; 2.15A {Mus musculus} SCOP: d.93.1.1
Probab=21.02 E-value=48 Score=18.71 Aligned_cols=24 Identities=21% Similarity=0.332 Sum_probs=15.5
Q ss_pred CCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 7 PEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 7 P~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
|.|.++||++...-. .++-+++++
T Consensus 24 ~~G~FLVR~S~~~~g---~~~LSv~~~ 47 (103)
T 1i3z_A 24 VDGNFLIRDSESVPG---ALCLCVSFK 47 (103)
T ss_dssp STTEEEEEECSSSTT---CEEEEEECS
T ss_pred CCceEEEEeCCCCCC---CEEEEEEEC
Confidence 689999999854221 355555554
No 290
>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}
Probab=20.96 E-value=32 Score=20.54 Aligned_cols=15 Identities=33% Similarity=0.643 Sum_probs=12.2
Q ss_pred eecc---CCcEEEEEcCH
Q 045201 3 RILR---PEGAVIIRDQA 17 (66)
Q Consensus 3 RILR---P~G~vIiRD~~ 17 (66)
++|+ +.|.++||++.
T Consensus 33 ~lL~~~~~~G~FLVR~S~ 50 (124)
T 2eob_A 33 DMLMRIPRDGAFLIRKRE 50 (124)
T ss_dssp HHHHHCCSSSEEEEECCT
T ss_pred HHHhcCCCCCEEEEEecC
Confidence 3566 68999999987
No 291
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=20.74 E-value=53 Score=24.44 Aligned_cols=27 Identities=11% Similarity=0.086 Sum_probs=20.2
Q ss_pred eccCCcEEEEEcCHHHHHHHHhhhccC
Q 045201 4 ILRPEGAVIIRDQADVLVKVRKIVGGM 30 (66)
Q Consensus 4 ILRP~G~vIiRD~~~vi~~v~~i~~~l 30 (66)
++||.|+|=.+-..+-.+.+..++.++
T Consensus 610 ~vRPD~yv~~~~~~~~~~~l~~~~~~~ 636 (639)
T 2dkh_A 610 VVRPDQYVAQVLPLGDHAALSAYFESF 636 (639)
T ss_dssp EECTTSBEEEEECTTCHHHHHHHHHTT
T ss_pred EECCCCceEEeechhhHHHHHHHHHHH
Confidence 689999999886666667777766543
No 292
>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein binding/transferase complex; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1
Probab=20.23 E-value=52 Score=18.95 Aligned_cols=24 Identities=21% Similarity=0.262 Sum_probs=16.2
Q ss_pred CCcEEEEEcCHHHHHHHHhhhccCCce
Q 045201 7 PEGAVIIRDQADVLVKVRKIVGGMRWN 33 (66)
Q Consensus 7 P~G~vIiRD~~~vi~~v~~i~~~l~W~ 33 (66)
|.|.++||++...- -.++-+++++
T Consensus 20 ~~G~FLVR~S~~~~---g~y~LSv~~~ 43 (109)
T 1ju5_A 20 RHGVFLVRDSSTSP---GDYVLSVSEN 43 (109)
T ss_dssp CTTEEEEEECSSST---TEEEEEEECS
T ss_pred CCCEEEEEecCCCC---CCEEEEEEEC
Confidence 58999999986532 2455566664
No 293
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=20.09 E-value=1.3e+02 Score=16.89 Aligned_cols=28 Identities=11% Similarity=0.195 Sum_probs=23.8
Q ss_pred EEEEEcCHHHHHHHHhhhccCCceeEEe
Q 045201 10 AVIIRDQADVLVKVRKIVGGMRWNTKII 37 (66)
Q Consensus 10 ~vIiRD~~~vi~~v~~i~~~l~W~~~~~ 37 (66)
.+|+-|+......++.++....+++...
T Consensus 6 ILivdd~~~~~~~l~~~L~~~g~~v~~~ 33 (155)
T 1qkk_A 6 VFLIDDDRDLRKAMQQTLELAGFTVSSF 33 (155)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCcEEEEE
Confidence 5788999999999999999888887654
Done!