Query 045207
Match_columns 350
No_of_seqs 233 out of 2081
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 19:11:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045207.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045207hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 3E-64 1E-68 508.2 27.5 345 1-349 75-480 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 5.7E-62 2E-66 490.1 29.1 342 1-349 67-461 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 1.6E-58 5.6E-63 467.0 25.0 336 1-349 74-463 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 3.9E-54 1.3E-58 431.7 21.4 321 1-336 58-438 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 3E-52 1E-56 420.1 26.6 323 1-336 56-461 (501)
6 2wdx_A Putative hexose oxidase 100.0 5.2E-49 1.8E-53 399.0 23.6 327 2-336 80-483 (523)
7 2y3s_A TAML; oxidoreductase; H 100.0 5.9E-48 2E-52 391.7 27.8 324 1-336 80-487 (530)
8 2ipi_A Aclacinomycin oxidoredu 100.0 1.5E-47 5.1E-52 388.3 28.6 323 2-336 78-479 (521)
9 1zr6_A Glucooligosaccharide ox 100.0 7.5E-48 2.6E-52 389.0 25.1 318 2-336 65-445 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 2.4E-45 8.2E-50 367.1 28.5 312 2-330 61-418 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 4.2E-29 1.4E-33 253.9 15.4 150 2-156 93-251 (534)
12 4bby_A Alkyldihydroxyacetoneph 100.0 3.8E-29 1.3E-33 259.8 14.8 155 1-156 227-390 (658)
13 4feh_A Oxidoreductase DPRE1; a 100.0 3.2E-28 1.1E-32 244.0 15.3 147 3-154 68-218 (481)
14 2exr_A Cytokinin dehydrogenase 99.9 4.7E-28 1.6E-32 245.5 13.8 149 2-155 85-243 (524)
15 3pm9_A Putative oxidoreductase 99.9 2.5E-27 8.7E-32 237.3 17.3 153 1-155 73-232 (476)
16 2uuu_A Alkyldihydroxyacetoneph 99.9 7.6E-28 2.6E-32 246.4 12.6 151 2-155 160-319 (584)
17 2vfr_A Xylitol oxidase, aldito 99.9 3.1E-26 1E-30 226.5 15.2 144 4-154 41-187 (422)
18 1wvf_A 4-cresol dehydrogenase 99.9 1.3E-25 4.6E-30 227.4 16.2 151 1-155 78-245 (520)
19 3js8_A Cholesterol oxidase; ch 99.9 2.4E-24 8.1E-29 217.0 14.8 149 1-154 51-221 (540)
20 1e8g_A Vanillyl-alcohol oxidas 99.9 4E-24 1.4E-28 218.3 16.5 153 1-155 92-277 (560)
21 2i0k_A Oxidoreductase; MIX alp 99.9 3E-24 1E-28 219.1 14.6 149 2-155 58-226 (561)
22 1f0x_A DLDH, D-lactate dehydro 99.9 3.9E-24 1.3E-28 217.9 10.2 151 1-156 67-278 (571)
23 2yvs_A Glycolate oxidase subun 99.8 2.7E-21 9.3E-26 174.5 10.1 114 37-158 1-122 (219)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.8 1.3E-20 4.3E-25 179.5 9.2 139 1-152 76-217 (322)
25 3i99_A UDP-N-acetylenolpyruvoy 99.8 3.5E-20 1.2E-24 178.4 11.9 140 1-152 52-199 (357)
26 1hsk_A UDP-N-acetylenolpyruvoy 99.8 3E-20 1E-24 177.5 7.7 135 1-152 70-212 (326)
27 1uxy_A MURB, uridine diphospho 99.8 1.4E-18 4.9E-23 166.5 11.9 139 2-152 37-183 (340)
28 2gqt_A UDP-N-acetylenolpyruvyl 99.8 3.8E-19 1.3E-23 165.1 6.6 134 3-151 39-173 (268)
29 1ffv_C CUTM, flavoprotein of c 96.6 0.0024 8.4E-08 59.2 6.1 134 3-151 25-178 (287)
30 1n62_C Carbon monoxide dehydro 94.0 0.032 1.1E-06 51.6 3.5 133 4-150 26-177 (288)
31 2w3s_A Xanthine dehydrogenase; 93.0 0.074 2.5E-06 52.5 4.5 134 5-150 198-346 (462)
32 3nvz_B Xanthine dehydrogenase/ 76.6 1.6 5.4E-05 40.4 3.4 55 6-62 32-90 (305)
33 1t3q_C Quinoline 2-oxidoreduct 70.7 3.3 0.00011 37.9 3.9 129 6-149 27-175 (288)
34 3hrd_C Nicotinate dehydrogenas 66.6 3.1 0.00011 38.2 2.9 52 6-59 27-82 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 55.2 14 0.00047 34.4 5.1 54 6-60 27-84 (324)
36 2crl_A Copper chaperone for su 35.4 91 0.0031 22.7 6.1 35 36-70 48-82 (98)
37 3iwl_A Copper transport protei 22.6 1.5E+02 0.0052 19.4 5.0 33 36-68 30-62 (68)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=3e-64 Score=508.21 Aligned_cols=345 Identities=51% Similarity=0.935 Sum_probs=288.8
Q ss_pred CCCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEeccCCCccee
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDVENEIACVQSSATIGQLYYKIAEKSKILAFLAGICHSVGV 80 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgv 80 (350)
++++||++||||||+.+.+.....++++|||++||+|++|+++++|+||||+++++|+++|.++|+++.++.|.|++|||
T Consensus 75 ~~~~~v~vrggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgv 154 (518)
T 3vte_A 75 KVGLQIRTRSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGV 154 (518)
T ss_dssp HHTCEEEEESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBH
T ss_pred HcCCcEEEECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeee
Confidence 36899999999999998775333359999999999999999999999999999999999999998788999999999999
Q ss_pred ccccccCccCCccccccchhhceeEEEEEccCCcEEeccCCCcchhhhhhhcCCCceEEEEEEEEEEeecCceEEEEEe-
Q 045207 81 DGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLDRESMGEDLFWAILVGGGASFGVIIAWKIKLVTVPQTVTVFTI- 159 (350)
Q Consensus 81 ~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~~~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~~~~~~~~~- 159 (350)
||+++|||+|+++++||+++|+|++++||++||++++.+.+++|||||+||+++|+|||||+++||++|.|+.++.|.+
T Consensus 155 gG~~~gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~ 234 (518)
T 3vte_A 155 GGHFSGGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVK 234 (518)
T ss_dssp HHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEE
T ss_pred eeeeCCCCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEE
Confidence 9999999999999999999999999999999999997445689999999998448999999999999999987665543
Q ss_pred -----------hHHHHHHHhhccccceeEEEEeecc-Ccc-cCCCceEEEEEEEEEecCccCccchhcccccccCccccc
Q 045207 160 -----------LNKWQYIADKLDEDLILRIFLRRLV-DAT-AKGKRTMQALFSGLFLGGVDRLLPLMDQSFHVLGLVKQD 226 (350)
Q Consensus 160 -----------~~~~~~~~~~~p~~l~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~ 226 (350)
+..||++++++|+++++.+.+...| .|. +.+...+.+.+.++|+|+.+++.+.|+++|++++....+
T Consensus 235 ~~~~~~~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~ 314 (518)
T 3vte_A 235 KNMEIHGLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTD 314 (518)
T ss_dssp ECCCHHHHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGG
T ss_pred ecCCHHHHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccc
Confidence 6789999999999999999887532 111 111123578899999999999999998888888776678
Q ss_pred eeEeCHHHHHHhhcCCCC----------------------------------CchHHHHHhccc-----c------ccCC
Q 045207 227 CIELSWIKSVLCFAGFQK----------------------------------RESRDVLLERTT-----I------LEGG 261 (350)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~ll~~~~-----~------l~GG 261 (350)
+.+++|++++.++++++. .+.++.+++... . .|||
T Consensus 315 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GG 394 (518)
T 3vte_A 315 CKEFSWIDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGG 394 (518)
T ss_dssp EEEECHHHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCG
T ss_pred eeecchhhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCc
Confidence 999999997776543210 012344444321 1 4899
Q ss_pred ccCCCCCCCCcccccCCceeEEEEEEEeCCCchhHHHHHHHHHHHHHHHhcCCCcCCCCcccccccCCCCC-CC-CCCCc
Q 045207 262 KMSEISESKIPFRHRAGNICQIEHLVVWAEEGIEASQRHINWIGELYSYLTPYVSKDPREAYINYKDLDIG-MN-NEGYT 339 (350)
Q Consensus 262 ai~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~~YvNy~d~dl~-~~-~~~~~ 339 (350)
+|++|++++|||+||+++.|.+++.+.|.++ +.++++++|++++++.|.||.++++.++|+||+|.||+ ++ ++ +
T Consensus 395 a~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~--~ 470 (518)
T 3vte_A 395 IMEEISESAIPFPHRAGIMYELWYTASWEKQ--EDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHAS--P 470 (518)
T ss_dssp GGGTSCTTSSSCCCCTTCCEEEEEEEEECCT--TTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTS--C
T ss_pred cccCCCCCCCcccccCcceEEEEEEEecCCc--chhHHHHHHHHHHHHHhccccCCCCccccccCCCcccccccccc--c
Confidence 9999999999999998558999999999765 46778899999999999999776678999999999998 54 45 8
Q ss_pred cceecccccC
Q 045207 340 TNYKQASIWG 349 (350)
Q Consensus 340 ~~~~~~~~~~ 349 (350)
+.|++|+.||
T Consensus 471 ~~~~~~~~w~ 480 (518)
T 3vte_A 471 NNYTQARIWG 480 (518)
T ss_dssp CCHHHHHHHH
T ss_pred cchhhhhhHH
Confidence 8899999886
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=5.7e-62 Score=490.08 Aligned_cols=342 Identities=43% Similarity=0.789 Sum_probs=287.0
Q ss_pred CCCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEeccCCCccee
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDVENEIACVQSSATIGQLYYKIAEKSKILAFLAGICHSVGV 80 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgv 80 (350)
++++||++||||||+.+.+...+.++++|||++||+|++|+++++|+||||+++++|+++|.+++.++.++.|.|+++||
T Consensus 67 ~~~~~v~vrGgGh~~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgi 146 (495)
T 3fw9_A 67 KGSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGT 146 (495)
T ss_dssp TSSCEEEEESSCCCTTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBH
T ss_pred HcCCeEEEECCCcCCCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeE
Confidence 58999999999999998877654458999999999999999999999999999999999999996678899999999999
Q ss_pred ccccccCccCCccccccchhhceeEEEEEccCCcEEeccCCCcchhhhhhhcCCCceEEEEEEEEEEeecCceEEEEEe-
Q 045207 81 DGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLDRESMGEDLFWAILVGGGASFGVIIAWKIKLVTVPQTVTVFTI- 159 (350)
Q Consensus 81 ~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~~~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~~~~~~~~~- 159 (350)
||+++|||+|+++++||+++|+|++++||++||++++++.+++|||||+|||++|+|||||+++||++|+|+....|.+
T Consensus 147 gG~~~gGg~G~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~ 226 (495)
T 3fw9_A 147 GGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVT 226 (495)
T ss_dssp HHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEE
T ss_pred eeeccCCCCcccccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEe
Confidence 9999999999999999999999999999999999998545789999999995448999999999999999986655432
Q ss_pred -----------hHHHHHHHhhccccceeEEEEeeccCcccCCCceEEEEEEEEEecCccCccchhcccccccCcccccee
Q 045207 160 -----------LNKWQYIADKLDEDLILRIFLRRLVDATAKGKRTMQALFSGLFLGGVDRLLPLMDQSFHVLGLVKQDCI 228 (350)
Q Consensus 160 -----------~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~ 228 (350)
+..||++++++|+++++.+... . . ..++.+.+.++|+|+++++.+.++++|+++++...++.
T Consensus 227 ~~~~~~~a~~~l~~~~~~~~~~~~~l~~~~~~~-~----~--~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~ 299 (495)
T 3fw9_A 227 KNVAIDEATSLLHKWQFVAEELEEDFTLSVLGG-A----D--EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYL 299 (495)
T ss_dssp EEECHHHHHHHHHHHHHHHHHSCTTEEEEEEEE-E----E--TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCE
T ss_pred ecCcHHHHHHHHHHHHHHHhcCChhHeEEEEEc-C----C--CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceE
Confidence 6689999999999999887753 1 1 22357889999999999999988887888877667899
Q ss_pred EeCHHHHHHhhcCCC-------------C---------------CchHHHHHhcc---cc------ccCCccCCCCCCCC
Q 045207 229 ELSWIKSVLCFAGFQ-------------K---------------RESRDVLLERT---TI------LEGGKMSEISESKI 271 (350)
Q Consensus 229 ~~~~~~~~~~~~~~~-------------~---------------~~~~~~ll~~~---~~------l~GGai~~v~~~~T 271 (350)
++||++.+.++++++ . .+.++.+++.. +. .|||||++|++++|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~T 379 (495)
T 3fw9_A 300 EMSWGESFAYLAGLETVSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFT 379 (495)
T ss_dssp EECHHHHHHHHTTCSCGGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTS
T ss_pred EcCHHHHHHHHhcccchhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCC
Confidence 999999776653211 0 01233444322 11 48999999999999
Q ss_pred cccccCCceeEEEEEEEeCCCchhHHHHHHHHHHHHHHHhcCCCcCCCCcccccccCCCCCCCCC----CCccceecccc
Q 045207 272 PFRHRAGNICQIEHLVVWAEEGIEASQRHINWIGELYSYLTPYVSKDPREAYINYKDLDIGMNNE----GYTTNYKQASI 347 (350)
Q Consensus 272 Af~hR~~~~~~~~~~~~w~~~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~~YvNy~d~dl~~~~~----~~~~~~~~~~~ 347 (350)
||+||++..|.+++.+.|.++..+.++++++|+++++++|.||.+++++++|+||+|.|++++++ .+++.|++|+.
T Consensus 380 Af~hR~~~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~ 459 (495)
T 3fw9_A 380 PFPHRSGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRS 459 (495)
T ss_dssp SCCCCTTCCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHH
T ss_pred CccccCccceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhh
Confidence 99999855899999999975433467788999999999999998766678999999999987655 13678889988
Q ss_pred cC
Q 045207 348 WG 349 (350)
Q Consensus 348 ~~ 349 (350)
|+
T Consensus 460 w~ 461 (495)
T 3fw9_A 460 WG 461 (495)
T ss_dssp HH
T ss_pred hH
Confidence 86
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=1.6e-58 Score=466.97 Aligned_cols=336 Identities=41% Similarity=0.826 Sum_probs=276.8
Q ss_pred CCCceEEEEcCCCCcCCCcccc--CCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEeccCCCcc
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVS--NVPLIIIDLINLSSINVDVENEIACVQSSATIGQLYYKIAEKSKILAFLAGICHSV 78 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~--~~~gividl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~v 78 (350)
++++||++||||||+.|.+... .+++++|||++||+|++|+++++|+||||++++||+++|.++|+.+++++|+|++|
T Consensus 74 ~~~~~~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~v 153 (500)
T 3tsh_A 74 RHSVRIRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTI 153 (500)
T ss_dssp HTTCEEEEESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTS
T ss_pred HCCCcEEEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCc
Confidence 4799999999999998876532 23599999999999999999999999999999999999999998888999999999
Q ss_pred eeccccccCccCCccccccchhhceeEEEEEccCCcEEeccCCCcchhhhhhhcCCCceEEEEEEEEEEeecCceEEEEE
Q 045207 79 GVDGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLDRESMGEDLFWAILVGGGASFGVIIAWKIKLVTVPQTVTVFT 158 (350)
Q Consensus 79 gv~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~~~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~~~~~~~~ 158 (350)
|+||+++|||+|+++++||+++|||+++|||++||++++++++++|||||+|||++|+|||||++|||++|+|+.+..|.
T Consensus 154 gvgG~~~~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~ 233 (500)
T 3tsh_A 154 GVGGNFAGGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFK 233 (500)
T ss_dssp BHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEE
T ss_pred eecCccccccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEE
Confidence 99999999999999999999999999999999999999865678999999998876899999999999999998776554
Q ss_pred e-----------hHHHHHHHhhccccceeEEEEeeccCcccCCCceEEEEEEEEEecCccCccchhcccccccCccccce
Q 045207 159 I-----------LNKWQYIADKLDEDLILRIFLRRLVDATAKGKRTMQALFSGLFLGGVDRLLPLMDQSFHVLGLVKQDC 227 (350)
Q Consensus 159 ~-----------~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~ 227 (350)
+ +..|+.+.+.+|+++...+..... ...+.++|.|+.+++...+.+.++.++.....+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~ 302 (500)
T 3tsh_A 234 ISKTVSEGAVDIINKWQVVAPQLPADLMIRIIAQGP-----------KATFEAMYLGTCKTLTPLMSSKFPELGMNPSHC 302 (500)
T ss_dssp EEEETTTTHHHHHHHHHHHGGGSCTTEEEEEEESSS-----------EEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGC
T ss_pred EecCcHHHHHHHHHHHHHhhhccChhhEEEEEecCC-----------CcEEEEEEecchhhhhhhhhhcchhccCCcccc
Confidence 3 667888889999998887654321 456778999999888888777777777766777
Q ss_pred eEeCHHHHHHhhcCCCC--------------------------C----chHHHHHhcccc----------ccCCccCCCC
Q 045207 228 IELSWIKSVLCFAGFQK--------------------------R----ESRDVLLERTTI----------LEGGKMSEIS 267 (350)
Q Consensus 228 ~~~~~~~~~~~~~~~~~--------------------------~----~~~~~ll~~~~~----------l~GGai~~v~ 267 (350)
..++|++.+.+...... . ...+.+++.... .+||++++++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~ 382 (500)
T 3tsh_A 303 NEMSWIQSIPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATP 382 (500)
T ss_dssp EEECHHHHHHHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSC
T ss_pred chhhhhccchhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCC
Confidence 88899876543211000 0 012233332111 3799999999
Q ss_pred CCCCcccccCCceeEEEEEEEeCCCchhHHHHHHHHHHHHHHHhcCCCcCCCCcccccccCCCCCCCCC-CCccceeccc
Q 045207 268 ESKIPFRHRAGNICQIEHLVVWAEEGIEASQRHINWIGELYSYLTPYVSKDPREAYINYKDLDIGMNNE-GYTTNYKQAS 346 (350)
Q Consensus 268 ~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~~YvNy~d~dl~~~~~-~~~~~~~~~~ 346 (350)
+++|||+||++..|.+++...|.++ +.+++..+|++++++.|.|+....+.++|+||+|.|++.++. .....|.+.+
T Consensus 383 ~~ata~~~R~~~l~~i~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~ 460 (500)
T 3tsh_A 383 ESATPFPHRKGVLFNIQYVNYWFAP--GAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGK 460 (500)
T ss_dssp TTSSSCCCCTTCCEEEEEEEEECST--TCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHH
T ss_pred CccCcCcccCCcEEEEEEEEecCCc--chhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccc
Confidence 9999999998667899999999877 356677899999999999998777789999999999999887 4445566655
Q ss_pred ccC
Q 045207 347 IWG 349 (350)
Q Consensus 347 ~~~ 349 (350)
.|+
T Consensus 461 ~w~ 463 (500)
T 3tsh_A 461 VWG 463 (500)
T ss_dssp HHH
T ss_pred hHH
Confidence 554
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=3.9e-54 Score=431.67 Aligned_cols=321 Identities=22% Similarity=0.436 Sum_probs=257.8
Q ss_pred CCCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeE-EeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEeccCCCcce
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSIN-VDVENEIACVQSSATIGQLYYKIAEKSKILAFLAGICHSVG 79 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~-~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vg 79 (350)
++++||++||||||+.+.+....+++++|||++||+|. +|+++++|+||||+++++|+++|.++| .+.+|.|.|+++|
T Consensus 58 ~~~~~v~v~ggGh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vg 136 (473)
T 3rja_A 58 KLNLKVSAKSGGHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVG 136 (473)
T ss_dssp HTTCCEEEESSCCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCB
T ss_pred HcCCeEEEEcCCCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcE
Confidence 47899999999999987655433458999999999997 999999999999999999999999987 3778999999999
Q ss_pred eccccccCccCCccccccchhhceeEEEEEccCCcEEe-ccCCCcchhhhhhhcCCCceEEEEEEEEEEeecCceEEEEE
Q 045207 80 VDGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLD-RESMGEDLFWAILVGGGASFGVIIAWKIKLVTVPQTVTVFT 158 (350)
Q Consensus 80 v~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~~~~~~~~ 158 (350)
|||+++|||+|+++++||+++|+|++++||++||++++ +.++++||||++||++ |+|||||+++||++|.|+..+.|.
T Consensus 137 vgG~~~ggg~G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~ 215 (473)
T 3rja_A 137 ISGHFAHGGFGFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFG 215 (473)
T ss_dssp HHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEE
T ss_pred eeeeccCCCCCcccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEE
Confidence 99999999999999999999999999999999999997 7778999999999998 899999999999999987655543
Q ss_pred e-------------hHHHHHHHh-hccccceeEEEEeeccCcccCCCceEEEEEEEEEecCccCccchhcccccccC-cc
Q 045207 159 I-------------LNKWQYIAD-KLDEDLILRIFLRRLVDATAKGKRTMQALFSGLFLGGVDRLLPLMDQSFHVLG-LV 223 (350)
Q Consensus 159 ~-------------~~~~~~~~~-~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~-~~ 223 (350)
+ +..|+++.. ++|+++++.+.+. .+ . .+.+.++|+|+++++++++++++.... +.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~-~~-----~----~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~ 285 (473)
T 3rja_A 216 VTLNWKNKTSALKGIEAVEDYARWVAPREVNFRIGDY-GA-----G----NPGIEGLYYGTPEQWRAAFQPLLDTLPAGY 285 (473)
T ss_dssp EECCCCSHHHHHHHHHHHHHHHHHTCCTTEEEEEEES-SS-----S----CCEEEEEEESCHHHHHHHHHHHHTTSCTTC
T ss_pred EEecCccHHHHHHHHHHHHHHhhhCCChhHEEEEEEc-CC-----C----cEEEEEEecCCHHHHHHHHHHHHHhCCCCc
Confidence 2 567888887 8999999988775 21 1 267889999999999998887543332 34
Q ss_pred cccee-EeCHHHHHHhhcCC---C------C--------------CchHHHHHhcc---------cc------ccCC---
Q 045207 224 KQDCI-ELSWIKSVLCFAGF---Q------K--------------RESRDVLLERT---------TI------LEGG--- 261 (350)
Q Consensus 224 ~~~~~-~~~~~~~~~~~~~~---~------~--------------~~~~~~ll~~~---------~~------l~GG--- 261 (350)
..++. ++||++.+.++... . . .+.++.+++.. .. .|||
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ks~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ 365 (473)
T 3rja_A 286 VVNPTTSLNWIESVLSYSNFDHVDFITPQPVENFYAKSLTLKSIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNS 365 (473)
T ss_dssp EECCCEEECHHHHHHHTSSSSCCCCSSCCCCBEEEEEEEEESCCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTC
T ss_pred ceeeecccCHHHHHHhhhcCCCcccccCCCCCcceEeccccCCCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcch
Confidence 56778 99999976654320 0 0 01233333211 11 4787
Q ss_pred ccCCCCCCCCcccccCCceeEEEEEEEeCC-CchhHHHHHHHHHHHHHHHhcCCCcCCCCcccccccCCCCCCCCC
Q 045207 262 KMSEISESKIPFRHRAGNICQIEHLVVWAE-EGIEASQRHINWIGELYSYLTPYVSKDPREAYINYKDLDIGMNNE 336 (350)
Q Consensus 262 ai~~v~~~~TAf~hR~~~~~~~~~~~~w~~-~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~~YvNy~d~dl~~~~~ 336 (350)
+|+++++++|||+||+ ..|.+++.+.|.+ + +.+++..+|++++++.+.++....+.++|+||+|.+++.++|
T Consensus 366 ai~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~~~~~ 438 (473)
T 3rja_A 366 QVTKVTNAETAYPHRD-KLWLIQFYDRYDNNQ--TYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMDRDYA 438 (473)
T ss_dssp GGGGSCTTTSSCCCTT-CSEEEEEEEEECTTS--CCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSCHHHH
T ss_pred hhcCCCCCCCccccCC-ccEEEEEEEEeCCCC--ccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCccccchhH
Confidence 7899999999999999 6999999999953 3 123345688888777775554333468999999999876667
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=3e-52 Score=420.14 Aligned_cols=323 Identities=22% Similarity=0.322 Sum_probs=245.1
Q ss_pred CCCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHH-hCCceEEeccCCCcce
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDVENEIACVQSSATIGQLYYKIAE-KSKILAFLAGICHSVG 79 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~~~~~~g~~~~vg 79 (350)
++++||++||||||+.+.+...+ ++++|||++||+|++|+++++|+||||+++.+|+++|.+ +| +.++.|.|++||
T Consensus 56 ~~~~~v~vrggGh~~~g~~~~~~-~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vg 132 (501)
T 3pop_A 56 TEGRGVACRSGGHCGQDFVGTPR-RDLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVG 132 (501)
T ss_dssp HTTCCEEEESSCCCSSSTTTSSC-CSEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCB
T ss_pred HcCCeEEEEeCCccCCCccccCC-CEEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCce
Confidence 47899999999999998776432 489999999999999999999999999999999999974 55 678999999999
Q ss_pred eccccccCccCCccccccchhhceeEEEEEc--cCCc--EEe-c---cCCCcchhhhhhhcCCCceEEEEEEEEEE----
Q 045207 80 VDGHFSGRGYGLLLRKYGLAADHVVDAHLID--VEGR--FLD-R---ESMGEDLFWAILVGGGASFGVIIAWKIKL---- 147 (350)
Q Consensus 80 v~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~--a~G~--~~~-~---~~~~~dLfwa~rG~g~g~~Givt~~t~k~---- 147 (350)
|||+++|||+|+++++||+++|+|+++|||+ +||+ +++ + +.+++|||||+||||+|+|||||+++||+
T Consensus 133 vgG~~~gGg~G~~~~~~G~~~D~v~~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~ 212 (501)
T 3pop_A 133 MGGLVAGGGYGPLSRQLGLVVDHLHAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHL 212 (501)
T ss_dssp HHHHHHHCCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTT
T ss_pred EeeccccCCCcccccccccHHHhEEEEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEecccc
Confidence 9999999999999999999999999999999 8999 443 2 35789999999998558999999999999
Q ss_pred ------eecC-ceEEEEEe---------------hHHHHHHHh--hccccc--eeEEEEeeccCcccCCCceEEEEEEEE
Q 045207 148 ------VTVP-QTVTVFTI---------------LNKWQYIAD--KLDEDL--ILRIFLRRLVDATAKGKRTMQALFSGL 201 (350)
Q Consensus 148 ------~p~~-~~~~~~~~---------------~~~~~~~~~--~~p~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (350)
+|.+ ..+..+.+ +..|++|.. ..|++. .+...+...+ ...+ .+.+..+
T Consensus 213 ~~~~~~~p~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~--~~~~----~~~~~~~ 286 (501)
T 3pop_A 213 ATEPVGLPRAAGRLHVQKVVFPWAMIDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNH--VSSG----VLQLMVQ 286 (501)
T ss_dssp CBTTTTBCBCCSEEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEEC--GGGC----EEEEEEE
T ss_pred CCChhhcCCCCceEEEEEEEEchhhcCHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecC--CCCC----eEEEEEE
Confidence 6653 34433222 345666654 345543 2333332221 0111 3556677
Q ss_pred EecCccCccchhccccccc------CccccceeEeCHHHHHHhhcCCC----------------C----CchHHHHHhcc
Q 045207 202 FLGGVDRLLPLMDQSFHVL------GLVKQDCIELSWIKSVLCFAGFQ----------------K----RESRDVLLERT 255 (350)
Q Consensus 202 ~~G~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----------------~----~~~~~~ll~~~ 255 (350)
+.|+.+++++++++++..+ .+.. ++.++||.+...+...-. . .+.++.+++..
T Consensus 287 ~~g~~~~~~~~l~~~~~~~~~~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~~~~~~ 365 (501)
T 3pop_A 287 QDADVDPEGEILARFVASLTEGTGVVGIP-RGGVMSWLTGTRYMSQADCGDVMGARSASKSAYHRAAPTDEQLSVLHRHL 365 (501)
T ss_dssp EETTTCTTCHHHHHHHHHHHTTSSCCCEE-EEEEEEHHHHHHHTCBCSCGGGTTCEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred EeCChHHHHHHHHHHHHhhhhccCCCccc-eeEEeCHHHHHhhhcCCCCCcccccccceecccccCCCCHHHHHHHHHHH
Confidence 8999988888888765431 2233 378999998765432100 0 01233444321
Q ss_pred ----c--c------ccCCccCCCCCCCCcccccCCceeEEEEEEEeCCCchhHHHHHHHHHHHHHHHhcCCC------cC
Q 045207 256 ----T--I------LEGGKMSEISESKIPFRHRAGNICQIEHLVVWAEEGIEASQRHINWIGELYSYLTPYV------SK 317 (350)
Q Consensus 256 ----~--~------l~GGai~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~wi~~~~~~l~p~~------~~ 317 (350)
+ . .|||+|+++++++|||+||+ ..|.+++.+.|.++ +.++++.+|++++++.|.++. +.
T Consensus 366 ~~~~~~~~~~~~~~~~GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~~~~~g~p~~~~ 442 (501)
T 3pop_A 366 HADHPGQASYVMFNSYGGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDA--ELDELHLGWLRGLYEEFFAGTGGVPVTGG 442 (501)
T ss_dssp TSSSCCTTEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTGGGTTSCCTTS
T ss_pred HhcCCCCceEEEEEecCcccccCCCCCCCccCcC-ccEEEEEEEEeCCc--chHHHHHHHHHHHHHHHHHhhcCCCCcCC
Confidence 1 1 48999999999999999999 69999999999866 456778999999999997553 22
Q ss_pred CCCcccccccCCCCCCCCC
Q 045207 318 DPREAYINYKDLDIGMNNE 336 (350)
Q Consensus 318 ~~~~~YvNy~d~dl~~~~~ 336 (350)
.+.++|+||+|.|+++++|
T Consensus 443 ~~~gaYvNy~d~dl~~~~~ 461 (501)
T 3pop_A 443 RTDGCYINYPDADLLDPAR 461 (501)
T ss_dssp SBCCCCTTSCCGGGGCTTT
T ss_pred CCCceeccCCCcccccccc
Confidence 3579999999999988776
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=5.2e-49 Score=398.97 Aligned_cols=327 Identities=24% Similarity=0.380 Sum_probs=239.1
Q ss_pred CCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHH-hCCceEEeccCCCccee
Q 045207 2 HGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDVENEIACVQSSATIGQLYYKIAE-KSKILAFLAGICHSVGV 80 (350)
Q Consensus 2 ~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~~~~~~g~~~~vgv 80 (350)
+++||++||||||+.+.+... +++++|||++||+|++|++.++|+||||+++.+|+++|.+ +| +.++.|.|++|||
T Consensus 80 ~~~~~~v~ggGh~~~g~~~~~-~~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgv 156 (523)
T 2wdx_A 80 TGKRVAVRSGGHCFEDFVDNP-DVKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGV 156 (523)
T ss_dssp HTCCEEEESSCCCSSSSSSST-TCCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBH
T ss_pred cCCcEEEEcCCCCCCCCccCC-CCeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCee
Confidence 689999999999999876543 2489999999999999999999999999999999999984 76 5778899999999
Q ss_pred ccccccCccCCccccccchhhceeEEEEEccC--CcEE--e-ccC-CCcc--hhhhhhhcCCCceEEEEEEEEEE-----
Q 045207 81 DGHFSGRGYGLLLRKYGLAADHVVDAHLIDVE--GRFL--D-RES-MGED--LFWAILVGGGASFGVIIAWKIKL----- 147 (350)
Q Consensus 81 ~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~--G~~~--~-~~~-~~~d--Lfwa~rG~g~g~~Givt~~t~k~----- 147 (350)
||+++|||+|+++++||+++|+|+++|||++| |+++ + +.. +++| ||||+|||++|+|||||+++||+
T Consensus 157 gG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~ 236 (523)
T 2wdx_A 157 GGHICGGGYGPLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVG 236 (523)
T ss_dssp HHHHHHTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCC
T ss_pred CccccCCCCCcccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccC
Confidence 99999999999999999999999999999955 9974 2 332 5566 99999987658999999999999
Q ss_pred ------eecCc-eEEEEEe---------------hHHHHHHHhh--ccccc--eeEEEEeeccCcccCCCceEEEEEEEE
Q 045207 148 ------VTVPQ-TVTVFTI---------------LNKWQYIADK--LDEDL--ILRIFLRRLVDATAKGKRTMQALFSGL 201 (350)
Q Consensus 148 ------~p~~~-~~~~~~~---------------~~~~~~~~~~--~p~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (350)
+|.|+ .+..+.+ +..|++|... .|++. .+...+...+ ...+..++.+.+..+
T Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~ 314 (523)
T 2wdx_A 237 RNPERLLPKPPATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGN--EVPGMGESGFMMPIQ 314 (523)
T ss_dssp SCGGGSSCCCCSEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEEC--CCTTCTTCSEEEEEE
T ss_pred CCcccccCCCcccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEecc--CCCCCcceeEEEEEE
Confidence 99875 2332222 4456666654 56552 2332222221 011211234666778
Q ss_pred EecCccCccchhcccccc----cC-ccccceeEeCHHHHHHhhcC----------CC----CCchHHHHHhcc------c
Q 045207 202 FLGGVDRLLPLMDQSFHV----LG-LVKQDCIELSWIKSVLCFAG----------FQ----KRESRDVLLERT------T 256 (350)
Q Consensus 202 ~~G~~~~~~~~l~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~----------~~----~~~~~~~ll~~~------~ 256 (350)
|.|+.++..+.+++++.. ++ +....+..++|.+....+.. +. ....++.+++.. +
T Consensus 315 ~~g~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (523)
T 2wdx_A 315 VDATRPDARRLLDAHIEAVIDGVPPAEVPEPIEQRWLASTPGRGGRGPASKTKAGYLRKRLTDRQIQAVYENMTHMDGID 394 (523)
T ss_dssp EETTSTTHHHHHHHHHHHHHTTCTTCBCCCCEEEETTSSCCCCCSSCCEEEEEEEEESSCCCHHHHHHHHHHHTCCTTCS
T ss_pred EeCCHHHHHHHHHHHHHHHHhhcCCCccccceeccHHHHHHhhcCCCCceeeecccccCCCCHHHHHHHHHHHHhcCCCC
Confidence 899988877777664332 22 23345567788663221110 10 011233333321 1
Q ss_pred c------ccCCccCCCCCCCCcccccCCceeEEEEEEEeCCCchhHHHHHHHHHHHHHHHhc------CCCcCCCCcccc
Q 045207 257 I------LEGGKMSEISESKIPFRHRAGNICQIEHLVVWAEEGIEASQRHINWIGELYSYLT------PYVSKDPREAYI 324 (350)
Q Consensus 257 ~------l~GGai~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~wi~~~~~~l~------p~~~~~~~~~Yv 324 (350)
. .+||+++++++++|||+||+ ..|.+++.+.|.++ +.++++.+|++++++.+. |+.++...++|+
T Consensus 395 ~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~Y~ 471 (523)
T 2wdx_A 395 YGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANP--GNEAKHLTWVRKLYADVYAETGGVPVPNDVSDGAYI 471 (523)
T ss_dssp EEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSG--GGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBCCCCT
T ss_pred ceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCC--ccHHHHHHHHHHHHHHHHhhhcCCCccCCCCCccee
Confidence 1 37999999999999999999 68999999999876 456778999999999987 542112357999
Q ss_pred cccCCCCCCCCC
Q 045207 325 NYKDLDIGMNNE 336 (350)
Q Consensus 325 Ny~d~dl~~~~~ 336 (350)
||+|.++++.+|
T Consensus 472 Ny~d~~~~~~~~ 483 (523)
T 2wdx_A 472 NYPDSDLADPGL 483 (523)
T ss_dssp TSCCGGGGCTTT
T ss_pred cCCccccccccc
Confidence 999999987766
No 7
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=5.9e-48 Score=391.67 Aligned_cols=324 Identities=23% Similarity=0.396 Sum_probs=237.8
Q ss_pred CCCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHH-hCCceEEeccCCCcce
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDVENEIACVQSSATIGQLYYKIAE-KSKILAFLAGICHSVG 79 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~-~g~~~~~~~g~~~~vg 79 (350)
++++||++||||||+.+.+... +++++|||++||+|++|+++++|+||||+++.+|+++|.+ +| +.++.|.|++||
T Consensus 80 ~~~~~v~v~ggGh~~~g~~~~~-~~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vg 156 (530)
T 2y3s_A 80 RSGKRVAVRSGGHCYEDFVANS-DVRVVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVG 156 (530)
T ss_dssp HTTCCEEEESSCCCSSSTTTCT-TCCEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCB
T ss_pred HcCCcEEEECCCCCCCCCcccC-CCeEEEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCC
Confidence 3789999999999998866532 2489999999999999999999999999999999999985 76 577889999999
Q ss_pred eccccccCccCCccccccchhhceeEEEEEc--cCCcEE--e-ccC-CCcc--hhhhhhhcCCCceEEEEEEEEEE----
Q 045207 80 VDGHFSGRGYGLLLRKYGLAADHVVDAHLID--VEGRFL--D-RES-MGED--LFWAILVGGGASFGVIIAWKIKL---- 147 (350)
Q Consensus 80 v~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~--a~G~~~--~-~~~-~~~d--Lfwa~rG~g~g~~Givt~~t~k~---- 147 (350)
+||+++|||+|+++++||+++|+|++++||+ ++|+++ + +.+ +++| ||||+||+|+|+|||||+++||+
T Consensus 157 vgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~ 236 (530)
T 2y3s_A 157 AGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEAD 236 (530)
T ss_dssp HHHHHHTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSS
T ss_pred cCCCcCCCCCCcccccccchhhheeeEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeeccc
Confidence 9999999999999999999999999999999 559974 3 333 5555 99999998658999999999999
Q ss_pred --------eecCc-eEEE----EE-----------ehHHHHHHHhh--ccccc--eeEEEEeeccCcccCCCceEEEEEE
Q 045207 148 --------VTVPQ-TVTV----FT-----------ILNKWQYIADK--LDEDL--ILRIFLRRLVDATAKGKRTMQALFS 199 (350)
Q Consensus 148 --------~p~~~-~~~~----~~-----------~~~~~~~~~~~--~p~~l--~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (350)
+|.|+ .+.. |. ++..|++|... .|++. .....+...+ .... .+.+.
T Consensus 237 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~----~~~~--~~~~~ 310 (530)
T 2y3s_A 237 VPPEPGRLLPRPPAEVLLNTTVWPWEGLDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTR----SQSG--ALAMT 310 (530)
T ss_dssp CCSCGGGSSCCCCSEEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEEC----GGGS--EEEEE
T ss_pred CccccccccCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEecc----CCCC--cEEEE
Confidence 88865 3322 22 14456666543 45542 2222222221 1111 34556
Q ss_pred EEEecCccCccchhcccccc----cC-ccccceeEeCHHHHHHhhc----CC------------C---CCchHHHHHhcc
Q 045207 200 GLFLGGVDRLLPLMDQSFHV----LG-LVKQDCIELSWIKSVLCFA----GF------------Q---KRESRDVLLERT 255 (350)
Q Consensus 200 ~~~~G~~~~~~~~l~~~~~~----~~-~~~~~~~~~~~~~~~~~~~----~~------------~---~~~~~~~ll~~~ 255 (350)
.+|.|+.++..+.+++++.. ++ +....+..++|.+....+. +. . ..+.++.+++..
T Consensus 311 ~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~s~~~~~~~~~~~i~~~~~~~ 390 (530)
T 2y3s_A 311 TQLDATGPDAEKRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWPGIAGDGDMTGRAKIKAAYARRSFDDRQIGTLYTRL 390 (530)
T ss_dssp EEEECCSTTHHHHHHHHHHHHHTTCSSCCEEEEEEEEHHHHTTCHHHHCCCCCCSEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHHHHHHhhcCCCccceeeeccHHHHHHhhcCCCCCcccccceeeccccccCCCHHHHHHHHHHH
Confidence 67889988877777764322 23 2334567889987543211 00 0 001233333221
Q ss_pred -----c--c------ccCCccCCCCCCCCcccccCCceeEEEEEEEeCCCchhHHHHHHHHHHHHHHHhc------CCCc
Q 045207 256 -----T--I------LEGGKMSEISESKIPFRHRAGNICQIEHLVVWAEEGIEASQRHINWIGELYSYLT------PYVS 316 (350)
Q Consensus 256 -----~--~------l~GGai~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~wi~~~~~~l~------p~~~ 316 (350)
+ . .+||+++++++++|||+||+ ..|.+++.+.|.++ +.++++.+|++++++.+. |+.+
T Consensus 391 ~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~l~~~~~g~p~~~ 467 (530)
T 2y3s_A 391 TSTDYDNPAGVVALIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDP--AQDPVHVRWIRELYRDVYADTGGVPVPG 467 (530)
T ss_dssp HCSSSCCTTCEEEEEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCT--TCHHHHHHHHHHHHHHHTGGGTTSCCTT
T ss_pred HhcCCCCCceEEEEEecCCccccCCCCcCcccccc-cceeEEEEEecCCC--cchHHHHHHHHHHHHHHHhhhcCCCccc
Confidence 1 1 37999999999999999999 58999999999876 356778999999999997 5421
Q ss_pred CCCCcccccccCCCCCCCCC
Q 045207 317 KDPREAYINYKDLDIGMNNE 336 (350)
Q Consensus 317 ~~~~~~YvNy~d~dl~~~~~ 336 (350)
....++|+||+|.++++++|
T Consensus 468 ~~~~g~Y~Ny~d~~~~~~~~ 487 (530)
T 2y3s_A 468 GAADGAYVNYPDVDLADEEW 487 (530)
T ss_dssp TTBCCCCTTSCCGGGGCTTT
T ss_pred CCCCceEeCCcCcccccccc
Confidence 12357999999999988775
No 8
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.5e-47 Score=388.29 Aligned_cols=323 Identities=23% Similarity=0.397 Sum_probs=237.8
Q ss_pred CCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHH-HhCCceEEeccCCCccee
Q 045207 2 HGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDVENEIACVQSSATIGQLYYKIA-EKSKILAFLAGICHSVGV 80 (350)
Q Consensus 2 ~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~-~~g~~~~~~~g~~~~vgv 80 (350)
+++||++||||||+.+.+... +++++|||++||+|++|++.++|+||||+++.+|+++|. ++| +.+|.|.|++|||
T Consensus 78 ~~~~~~vrggGh~~~g~~~~~-~~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgv 154 (521)
T 2ipi_A 78 AGQRIAVRSGGHCFEGFVDDP-AVRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGV 154 (521)
T ss_dssp HTCCEEEESSCCCTTCGGGCT-TCCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBH
T ss_pred cCCeEEEECCCcCCCCCcccC-CCeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCccc
Confidence 689999999999998865432 248999999999999999999999999999999999997 676 6778999999999
Q ss_pred ccccccCccCCccccccchhhceeEEEEEccC--CcEE--e-ccC-CCcc--hhhhhhhcCCCceEEEEEEEEEE-----
Q 045207 81 DGHFSGRGYGLLLRKYGLAADHVVDAHLIDVE--GRFL--D-RES-MGED--LFWAILVGGGASFGVIIAWKIKL----- 147 (350)
Q Consensus 81 ~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~--G~~~--~-~~~-~~~d--Lfwa~rG~g~g~~Givt~~t~k~----- 147 (350)
||+++|||+|+++++||+++|+|+++|||++| |+++ . +.. +++| ||||+|||++|+|||||+++||+
T Consensus 155 gG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~ 234 (521)
T 2ipi_A 155 GGHVLGGGYGPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATG 234 (521)
T ss_dssp HHHTTTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCS
T ss_pred CCcccCCCCCccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccC
Confidence 99999999999999999999999999999977 9974 2 322 4554 99999997558999999999999
Q ss_pred ------eecCc-eEE----EEEe-----------hHHHHHHHhh--ccccc--eeEEEEeeccCcccCCCceEEEEEEEE
Q 045207 148 ------VTVPQ-TVT----VFTI-----------LNKWQYIADK--LDEDL--ILRIFLRRLVDATAKGKRTMQALFSGL 201 (350)
Q Consensus 148 ------~p~~~-~~~----~~~~-----------~~~~~~~~~~--~p~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (350)
+|.|+ .+. .|.. +..|++|... .|++. .+...+...+ .... .+.+..+
T Consensus 235 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~----~~~~--~~~~~~~ 308 (521)
T 2ipi_A 235 TDPSQLLPKAPTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNS----RAAG--QILLDIQ 308 (521)
T ss_dssp SCGGGSSCBCCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEEC----TTSC--EEEEEEE
T ss_pred CCcccccCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEecc----CCCC--ceEEEEE
Confidence 99875 232 2321 4456666544 45541 2322222221 1111 3445667
Q ss_pred EecCccCccchhcccccc----cC-ccccceeEeCHHHHHHhhcCCCC-----------------CchHHHHHhcc---c
Q 045207 202 FLGGVDRLLPLMDQSFHV----LG-LVKQDCIELSWIKSVLCFAGFQK-----------------RESRDVLLERT---T 256 (350)
Q Consensus 202 ~~G~~~~~~~~l~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~ll~~~---~ 256 (350)
|.|+.++..+.+++++.. ++ +....+..++|.+........+. .+.++.+++.. +
T Consensus 309 ~~g~~~~~~~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~ 388 (521)
T 2ipi_A 309 IDGGLDGAEALLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFDTGGFDRTKSKGAYLRKPWTAAQAATLYRHLSADS 388 (521)
T ss_dssp EETTSTTHHHHHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCCCTTCCEEEEEEEEESSCCCHHHHHHHHHHHHSCC
T ss_pred eccCHHHHHHHHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCCCCCCccceeeccccccCCCHHHHHHHHHHHHhCC
Confidence 889888877777664332 22 22345677899886543321111 01123333221 1
Q ss_pred c--------ccCCccCCCCCCCCcccccCCceeEEEEEEEeCCCchhHHHHHHHHHHHHHHHhc------CCCcCCCCcc
Q 045207 257 I--------LEGGKMSEISESKIPFRHRAGNICQIEHLVVWAEEGIEASQRHINWIGELYSYLT------PYVSKDPREA 322 (350)
Q Consensus 257 ~--------l~GGai~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~~~wi~~~~~~l~------p~~~~~~~~~ 322 (350)
. .+||+++++++++|||+||+ ..|.+++.+.|.++ +.+++..+|++++++.+. |+......++
T Consensus 389 ~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~--~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~ 465 (521)
T 2ipi_A 389 QVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDP--AHDDANLAWIREIYREIFATTGGVPVPDDRTEGT 465 (521)
T ss_dssp SSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCCC
T ss_pred CCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCC--CchHHHHHHHHHHHHHHHhhhcCCCcccCCCCce
Confidence 1 37999999999999999999 68999999999876 456778999999999997 4321113579
Q ss_pred cccccCCCCCCCCC
Q 045207 323 YINYKDLDIGMNNE 336 (350)
Q Consensus 323 YvNy~d~dl~~~~~ 336 (350)
|+||+|.++++.+|
T Consensus 466 Y~Ny~d~~~~~~~~ 479 (521)
T 2ipi_A 466 FINYPDVDLVDERW 479 (521)
T ss_dssp CTTSCCGGGGCTTT
T ss_pred EeCCCCcccccccc
Confidence 99999999887665
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=7.5e-48 Score=389.02 Aligned_cols=318 Identities=20% Similarity=0.447 Sum_probs=242.6
Q ss_pred CCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEeccCCCcceec
Q 045207 2 HGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDVENEIACVQSSATIGQLYYKIAEKSKILAFLAGICHSVGVD 81 (350)
Q Consensus 2 ~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgv~ 81 (350)
+++||++||||||+.+.+....+++++|||++||+|++| +.++|+||||+++.+|+++|.+++ ++.+|.|.|++|||+
T Consensus 65 ~~~~~~v~ggGh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvg 142 (503)
T 1zr6_A 65 AGVQISAKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVG 142 (503)
T ss_dssp HTCCEEEESSCCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHH
T ss_pred cCCeEEEECCCcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchh
Confidence 689999999999998766542234899999999999999 889999999999999999997775 578899999999999
Q ss_pred cccccCccCCccccccchhhceeEEEEEccCCcEEe-ccCCCcchhhhhhhcCCCceEEEEEEEEEEeecCceEEEEEe-
Q 045207 82 GHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLD-RESMGEDLFWAILVGGGASFGVIIAWKIKLVTVPQTVTVFTI- 159 (350)
Q Consensus 82 G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~~~~~~~~~- 159 (350)
|+++|||+|+++++||+++|+|++++||++||++++ +..+++|||||+|||+ |+|||||+++||++|.|+....+.+
T Consensus 143 G~~~gGg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~ 221 (503)
T 1zr6_A 143 GHVLGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVT 221 (503)
T ss_dssp HHHHHCCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEE
T ss_pred hhhcCCCCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEE
Confidence 999999999999999999999999999999999998 7778999999999999 7999999999999999875543331
Q ss_pred -----------hHHHHHHHhh-ccccceeEEEEeeccCcccCCCceEEEEEEEEEecCccCccchhcccccccCc--ccc
Q 045207 160 -----------LNKWQYIADK-LDEDLILRIFLRRLVDATAKGKRTMQALFSGLFLGGVDRLLPLMDQSFHVLGL--VKQ 225 (350)
Q Consensus 160 -----------~~~~~~~~~~-~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~--~~~ 225 (350)
+..|+++... +|++++..+.+... .+.+..+|.|+.+++.+.+++++..+.. ...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----------~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~ 290 (503)
T 1zr6_A 222 TTWNRKQHVAGLKALQDWAQNTMPRELSMRLEINAN-----------ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTIS 290 (503)
T ss_dssp ECCCHHHHHHHHHHHHHHHHHTCCTTBCCEEEEETT-----------EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEE
T ss_pred EeCCHHHHHHHHHHHHHHHhhcCChhHEEEEEEeCC-----------eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcC
Confidence 5567777766 89998887766421 5667788999998888888875443433 233
Q ss_pred ceeEeCHHHHHHhhc-C------CCCC-----------------chHHHH---Hh-ccc----c-------ccCC---cc
Q 045207 226 DCIELSWIKSVLCFA-G------FQKR-----------------ESRDVL---LE-RTT----I-------LEGG---KM 263 (350)
Q Consensus 226 ~~~~~~~~~~~~~~~-~------~~~~-----------------~~~~~l---l~-~~~----~-------l~GG---ai 263 (350)
.+..++|.+.+..+. . .+.+ +.++.+ +. ... . .+|| ++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av 370 (503)
T 1zr6_A 291 KLVETDWYGQINTYLYGADLNITYNYDVHEYFYANSLTAPRLSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSAL 370 (503)
T ss_dssp EEEEECHHHHHTTSCTTCCSSCSSCCCCCBCEEEEEEEESSCCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSG
T ss_pred ceeeCCHHHHHHHHcCCCcccccCCCCccccceecccchhhCCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhh
Confidence 467789987553221 0 0100 112222 22 211 1 3799 99
Q ss_pred CCCCCCCCcccccCCceeEEEEEEEe-----CCCchhHHHHHHHHHHHHHHHhcCCCcCCCCcccccccCCCCCCCCC
Q 045207 264 SEISESKIPFRHRAGNICQIEHLVVW-----AEEGIEASQRHINWIGELYSYLTPYVSKDPREAYINYKDLDIGMNNE 336 (350)
Q Consensus 264 ~~v~~~~TAf~hR~~~~~~~~~~~~w-----~~~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~~YvNy~d~dl~~~~~ 336 (350)
+++++++|||+||+ ..|.+++.+.| .++ +.+++..+|++++++.+.........++|+||+|.+++.++|
T Consensus 371 ~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~~~~~ 445 (503)
T 1zr6_A 371 AAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTS--PYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLTKEEA 445 (503)
T ss_dssp GGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCT--TTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCCHHHH
T ss_pred cCCCcccCCccccc-ceeEEEEEeeeccccCCCc--cchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccccchH
Confidence 99999999999998 58888887777 232 123344577777777665443211247999999988763344
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=2.4e-45 Score=367.10 Aligned_cols=312 Identities=24% Similarity=0.342 Sum_probs=236.3
Q ss_pred CCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEeccCCCcceec
Q 045207 2 HGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDVENEIACVQSSATIGQLYYKIAEKSKILAFLAGICHSVGVD 81 (350)
Q Consensus 2 ~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgv~ 81 (350)
+++||.+||||||+.+.+... ++++|||++||+|++|++.++|+||||+++.+|+++|.++| +.++.|.|+++||+
T Consensus 61 ~~~~~~v~ggGh~~~~~~~~~--~gvvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~ 136 (459)
T 2bvf_A 61 NGLEISVRSGGHNPNGYATND--GGIVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFC 136 (459)
T ss_dssp HTCCEEEESSCCCTTCTTCCS--SSEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHH
T ss_pred cCCcEEEEcCCcCCCCccccC--CeEEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccc
Confidence 689999999999998876433 48999999999999999999999999999999999999876 78889999999999
Q ss_pred cccccCccCCccccccchhhceeEEEEEccCCcEEe-ccCCCcchhhhhhhcCCCceEEEEEEEEEEeecCceEEE----
Q 045207 82 GHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLD-RESMGEDLFWAILVGGGASFGVIIAWKIKLVTVPQTVTV---- 156 (350)
Q Consensus 82 G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~~~~~~---- 156 (350)
|+++|||+|+++++||+.+|+|++++||++||++++ +..+++|||||+||++ |+|||||+++||++|.|+....
T Consensus 137 G~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~ 215 (459)
T 2bvf_A 137 GLALNGGVGFLTPKYGLASDNILGATLVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFIT 215 (459)
T ss_dssp HHHTTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEE
T ss_pred eeecCCCCccccccccCHhHhEEEEEEEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEE
Confidence 999999999999999999999999999999999998 7778999999999998 8999999999999999654332
Q ss_pred EEe--------hHHHHHHHhhccccceeEEEEeeccCcccCCCceEEEEEEEEEecCccCccchhcccccccC-ccccce
Q 045207 157 FTI--------LNKWQYIADKLDEDLILRIFLRRLVDATAKGKRTMQALFSGLFLGGVDRLLPLMDQSFHVLG-LVKQDC 227 (350)
Q Consensus 157 ~~~--------~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~ 227 (350)
|.. +..|+++...+|+++...+ .... +..+ ...+.+..+|.|+.+++.+.++++ ..+. +....+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~--~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~ 288 (459)
T 2bvf_A 216 WAPSVSELAGLLTSLLDALNEMADHIYPSV-FVGV---DENR--APSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSI 288 (459)
T ss_dssp ECCCHHHHHHHHHHHHHHHHHTTTTCCCEE-EEEE---CTTC--CEEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECC
T ss_pred echHHhhHHHHHHHHHHHHHhCcHhhcccc-ccCc---ccCC--CceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcce
Confidence 221 4456667666788774443 2111 0112 235666778999987777777764 3443 333456
Q ss_pred eEeCHHHHHHhhc---CCCCC--------------c----hHHHHHhc---cc----c----ccCCccCCCCCCCCcccc
Q 045207 228 IELSWIKSVLCFA---GFQKR--------------E----SRDVLLER---TT----I----LEGGKMSEISESKIPFRH 275 (350)
Q Consensus 228 ~~~~~~~~~~~~~---~~~~~--------------~----~~~~ll~~---~~----~----l~GGai~~v~~~~TAf~h 275 (350)
..++|.+...+.. .++.+ . .++.+.+. .+ . ++||++++ .++|||+|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~ 366 (459)
T 2bvf_A 289 AVRSYDEVVALNAEVGSFEDGMSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARH 366 (459)
T ss_dssp EEECHHHHHHHHHHHSCCCCSCEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCC
T ss_pred eecCHHHHHhcccccccCCCCCcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCccc
Confidence 7889977443311 11211 0 01111111 11 1 35888877 67899999
Q ss_pred cCCceeEEEEEEEeCCCchhHHHHHHHHHHHHHHHhcCCCcCCCCcccccccCCC
Q 045207 276 RAGNICQIEHLVVWAEEGIEASQRHINWIGELYSYLTPYVSKDPREAYINYKDLD 330 (350)
Q Consensus 276 R~~~~~~~~~~~~w~~~~~~~~~~~~~wi~~~~~~l~p~~~~~~~~~YvNy~d~d 330 (350)
|+ ..| +++...|.++. ..++.+.+|++++++.+.|+.....+++|+||+|.+
T Consensus 367 R~-~~~-~~~~~~w~~~~-~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~ 418 (459)
T 2bvf_A 367 RD-AMG-VLALAEWSGAA-PGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEV 418 (459)
T ss_dssp CS-SCE-EEEEEEECTTS-TTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSC
T ss_pred CC-cce-EEEEEEeCCCc-cchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCc
Confidence 99 578 88899998663 134557899999999999985101257999999976
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=99.96 E-value=4.2e-29 Score=253.91 Aligned_cols=150 Identities=20% Similarity=0.279 Sum_probs=134.6
Q ss_pred C-CceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCe------EEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEec-c
Q 045207 2 H-GLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSI------NVDVENEIACVQSSATIGQLYYKIAEKSKILAFLA-G 73 (350)
Q Consensus 2 ~-~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i------~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~-g 73 (350)
+ ++||++||||||+.+.+.+. ++++|||++||+| ++|+++++|+||||+++.+|++++.++| +.++. +
T Consensus 93 ~~~~~v~~~G~G~~~~g~~~~~--~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~ 168 (534)
T 1w1o_A 93 GWPYTIAFRGRGHSLMGQAFAP--GGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWT 168 (534)
T ss_dssp TCCCCEEEESSCCCSSSTTCCT--TSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCC
T ss_pred CCCceEEEECCCCCCCCCcCCC--CeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCC
Confidence 5 89999999999999877764 3899999999985 8898899999999999999999999986 44444 4
Q ss_pred CCCcceeccccccCccCCccccccchhhceeEEEEEccCCcEEe-ccCCCcchhhhhhhcCCCceEEEEEEEEEEeecCc
Q 045207 74 ICHSVGVDGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLD-RESMGEDLFWAILVGGGASFGVIIAWKIKLVTVPQ 152 (350)
Q Consensus 74 ~~~~vgv~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~~ 152 (350)
++..++|||+++++|.|..+++||.++|+|++++||++||++++ +..+++||||++||++ |+|||||+++||++|.|+
T Consensus 169 ~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~ 247 (534)
T 1w1o_A 169 DYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPA 247 (534)
T ss_dssp SSCCSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCS
T ss_pred CCCCEEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCc
Confidence 44678899999999999999999999999999999999999997 6678999999999999 899999999999999998
Q ss_pred eEEE
Q 045207 153 TVTV 156 (350)
Q Consensus 153 ~~~~ 156 (350)
....
T Consensus 248 ~~~~ 251 (534)
T 1w1o_A 248 RARW 251 (534)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 6443
No 12
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=99.96 E-value=3.8e-29 Score=259.81 Aligned_cols=155 Identities=25% Similarity=0.238 Sum_probs=136.8
Q ss_pred CCCceEEEEcCCCCcCCCccccC---CCeEEEEcCCCCCe-EEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEeccCCC
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVSN---VPLIIIDLINLSSI-NVDVENEIACVQSSATIGQLYYKIAEKSKILAFLAGICH 76 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~~---~~gividl~~~~~i-~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~ 76 (350)
++++||++||||||+.+.+.+.. .++|+|||++||+| +||+++++|+|||||++.+|.++|.++|+.+.+.+++..
T Consensus 227 ~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~ 306 (658)
T 4bby_A 227 KYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLE 306 (658)
T ss_dssp HTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTT
T ss_pred HCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCcc
Confidence 47999999999999986555431 24799999999997 899999999999999999999999999865544557778
Q ss_pred cceeccccccCccCCccccccchhhceeEEEEEccCCcEEe-c----cCCCcchhhhhhhcCCCceEEEEEEEEEEeecC
Q 045207 77 SVGVDGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLD-R----ESMGEDLFWAILVGGGASFGVIIAWKIKLVTVP 151 (350)
Q Consensus 77 ~vgv~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~-~----~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~ 151 (350)
..+|||++++++.|..+.+||.+.|+|+++|||++||++++ . ...++||+|.++|+. |+|||||++|||++|.|
T Consensus 307 ~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aGyDL~~L~iGSE-GTLGIITeatLrL~P~P 385 (658)
T 4bby_A 307 FSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTGPDIHHFIMGSE-GTLGVITEATIKIRPTP 385 (658)
T ss_dssp TCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSSSCTHHHHTTCT-TSSCEEEEEEEECEECC
T ss_pred ccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCCcCHHHHhccCC-CcCcceeeeeeeeccCC
Confidence 88899999999999999999999999999999999999985 2 235689999999999 89999999999999999
Q ss_pred ceEEE
Q 045207 152 QTVTV 156 (350)
Q Consensus 152 ~~~~~ 156 (350)
+....
T Consensus 386 ~~~~~ 390 (658)
T 4bby_A 386 EYQKY 390 (658)
T ss_dssp SEEEE
T ss_pred ccccc
Confidence 86543
No 13
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.95 E-value=3.2e-28 Score=243.98 Aligned_cols=147 Identities=19% Similarity=0.276 Sum_probs=132.0
Q ss_pred CceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCe-EEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEec-cCCCccee
Q 045207 3 GLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSI-NVDVENEIACVQSSATIGQLYYKIAEKSKILAFLA-GICHSVGV 80 (350)
Q Consensus 3 ~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i-~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~-g~~~~vgv 80 (350)
++|+.++|+|||+.+.+... ++++|||++||+| ++|+++++|+||||+++.+|+++|.++|+ .++. +..+.++|
T Consensus 68 ~~~v~~~G~G~s~~~~~~~~--~gvvIdl~~l~~i~~~d~~~~~v~v~aGv~l~~L~~~l~~~Gl--~l~~~~g~~~~tv 143 (481)
T 4feh_A 68 GRGAIARGLGRSYGDNAQNG--GGLVIDMTPLNTIHSIDADTKLVDIDAGVNLDQLMKAALPFGL--WVPVLPGTRQVTV 143 (481)
T ss_dssp TTCEEEECSSCSSSSTTCCT--TSEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHGGGTE--ECSCCCSCSCCBH
T ss_pred CceEEEEeCCcCCCCCCCCc--CeEEEECccCCCceEEcCCCCEEEEcCCccHHHHHHHHHHcCC--EEEEeCCcCcccc
Confidence 69999999999998766543 4899999999998 99999999999999999999999999874 4442 34457789
Q ss_pred ccccccCccCCccccccchhhceeEEEEEccCCcEEe-ccC-CCcchhhhhhhcCCCceEEEEEEEEEEeecCceE
Q 045207 81 DGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLD-RES-MGEDLFWAILVGGGASFGVIIAWKIKLVTVPQTV 154 (350)
Q Consensus 81 ~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~~-~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~~~~ 154 (350)
||.+.+|++|..++.||..+|+|++++||++||++++ +.+ +++|||||+||++ |+|||||+++||++|.|+..
T Consensus 144 GGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~dLf~a~rgs~-G~~GIIt~~tl~l~p~~~~~ 218 (481)
T 4feh_A 144 GGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAELFWATVGGN-GLTGIIMRATIEMTPTSTAY 218 (481)
T ss_dssp HHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHHHHHHHTTCT-TTTCEEEEEEEECEECSCSE
T ss_pred CCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChHHHHHhhccC-CCceEEEEEEEEEEeCCccE
Confidence 9999999999999999999999999999999999998 666 8999999999998 89999999999999998644
No 14
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.95 E-value=4.7e-28 Score=245.49 Aligned_cols=149 Identities=21% Similarity=0.344 Sum_probs=130.0
Q ss_pred CCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeC-----CC--CEEEEcCCCcHHHHHHH-HHHhCCceEEe-c
Q 045207 2 HGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDV-----EN--EIACVQSSATIGQLYYK-IAEKSKILAFL-A 72 (350)
Q Consensus 2 ~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~-----~~--~~v~v~~G~~~~~l~~~-l~~~g~~~~~~-~ 72 (350)
+++||++||||||+.|.+... ++|+|||++||+|++|+ +. .+|+||||+++.+++++ |+++| +.++ .
T Consensus 85 ~~~~v~~~GgGts~~g~~~~~--~gvvidl~~m~~i~i~~~~~~~~~~~~~v~v~aGv~~~~l~~~~l~~~G--l~~~~~ 160 (524)
T 2exr_A 85 DKLTVAARGNGHSINGQAMAE--GGLVVDMSTTAENHFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYG--LAPRSW 160 (524)
T ss_dssp SSCCEEEESSSCCSSSTTCCT--TSEEEEGGGGTTSCEEEEECCSSSSSEEEEEETTCBHHHHHHHHHHHHS--EECSCC
T ss_pred cCceEEEECCCcCCCCcccCC--CEEEEECcCCCCcEEeecccCCCCCceEEEEeCCcCHHHHHHHHHHHcC--CCCCCC
Confidence 789999999999999887654 38999999999987776 55 89999999999998554 55887 4422 2
Q ss_pred cCCCcceeccccccCccCCccccccchhhceeEEEEEccCCcEEe-ccCCCcchhhhhhhcCCCceEEEEEEEEEEeecC
Q 045207 73 GICHSVGVDGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLD-RESMGEDLFWAILVGGGASFGVIIAWKIKLVTVP 151 (350)
Q Consensus 73 g~~~~vgv~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~ 151 (350)
++++.++|||+++++|.|..+.+||.++|+|++++||++||++++ +..+++||||++||++ |+|||||++|||++|.|
T Consensus 161 ~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p 239 (524)
T 2exr_A 161 TDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEIENSELFFSVLGGL-GQFGIITRARVLLQPAP 239 (524)
T ss_dssp CSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECC
T ss_pred CcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECCCCChhHHhHhhcCC-CccEEEEEEEEEEEEcC
Confidence 445678899999999999999999999999999999999999997 6667899999999999 89999999999999999
Q ss_pred ceEE
Q 045207 152 QTVT 155 (350)
Q Consensus 152 ~~~~ 155 (350)
+...
T Consensus 240 ~~~~ 243 (524)
T 2exr_A 240 DMVR 243 (524)
T ss_dssp SEEE
T ss_pred CeeE
Confidence 8654
No 15
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.95 E-value=2.5e-27 Score=237.26 Aligned_cols=153 Identities=23% Similarity=0.359 Sum_probs=134.8
Q ss_pred CCCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCe-EEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEeccCCCcce
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSI-NVDVENEIACVQSSATIGQLYYKIAEKSKILAFLAGICHSVG 79 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i-~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vg 79 (350)
++++|+++||||||+.|.+.... ++++|||++||+| ++|+++++|+||||+++.+|+++|.++|+.+.+..+++..++
T Consensus 73 ~~~~pv~~~GgGt~~~g~~~~~~-ggvvIdl~~m~~i~~id~~~~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~t 151 (476)
T 3pm9_A 73 EARVALVPQGGNTGLVGGQTPHN-GEVVISLKRMDKIREIDTSSNTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCT 151 (476)
T ss_dssp HHTCCEEEESSSCCSSSTTCCCS-SCEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCB
T ss_pred HcCCeEEEEeCCCCCCCCccCCC-CcEEEEeeCCCceEEEcCCCCeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEE
Confidence 36899999999999998877643 5899999999998 899999999999999999999999998743333346777889
Q ss_pred eccccccCccCCccccccchhhceeEEEEEccCCcEEe-c-----cCCCcchhhhhhhcCCCceEEEEEEEEEEeecCce
Q 045207 80 VDGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLD-R-----ESMGEDLFWAILVGGGASFGVIIAWKIKLVTVPQT 153 (350)
Q Consensus 80 v~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~-~-----~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~~~ 153 (350)
|||++.+++.|..+.+||.++|+|++++||++||++++ . ...++||+|+++|++ |+|||||+++||++|.|+.
T Consensus 152 vGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~ 230 (476)
T 3pm9_A 152 IGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGYDLRDLFIGAE-GTLGIITAATLKLFPKPRA 230 (476)
T ss_dssp HHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSCCCHHHHTTST-TSSCEEEEEEEECEECCSE
T ss_pred EccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCcCHHHHhccCC-CCcEEEEEEEEEEeecCce
Confidence 99999999999999999999999999999999999996 2 234689999999999 8999999999999999985
Q ss_pred EE
Q 045207 154 VT 155 (350)
Q Consensus 154 ~~ 155 (350)
..
T Consensus 231 ~~ 232 (476)
T 3pm9_A 231 VE 232 (476)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 16
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.95 E-value=7.6e-28 Score=246.38 Aligned_cols=151 Identities=21% Similarity=0.244 Sum_probs=130.5
Q ss_pred CCceEEEEcCCCCcCCCccccC--CCeEEEEcCCCCCe-EEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEec--cCCC
Q 045207 2 HGLEIRVRGGGHYFEGVSYVSN--VPLIIIDLINLSSI-NVDVENEIACVQSSATIGQLYYKIAEKSKILAFLA--GICH 76 (350)
Q Consensus 2 ~~~~~~~~ggGhs~~g~~~~~~--~~gividl~~~~~i-~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~--g~~~ 76 (350)
+++||++||||||+.+.+.... +++|+|||++||+| ++|+++++|+||||+++.+|+++|.++| +.++. ++..
T Consensus 160 ~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~~l~~~l~~~G--l~~~~~p~s~~ 237 (584)
T 2uuu_A 160 YNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQG--VSLGHDPDSFE 237 (584)
T ss_dssp HTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTT--EECCCCCTTGG
T ss_pred cCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHHHHHHHHHHcC--CeeCcCCCccC
Confidence 6899999999999987666531 35899999999998 8999999999999999999999999987 44433 2344
Q ss_pred cceeccccccCccCCccccccchhhceeEEEEEccCCcEEe----ccCCCcchhhhhhhcCCCceEEEEEEEEEEeecCc
Q 045207 77 SVGVDGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLD----RESMGEDLFWAILVGGGASFGVIIAWKIKLVTVPQ 152 (350)
Q Consensus 77 ~vgv~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~----~~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~~ 152 (350)
.++|||++++++.|+.+.+||.++|+|++++||++||++++ +...++||+|+++|++ |+|||||+++||++|.|+
T Consensus 238 ~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~~~Gse-GtlGIIT~~tlrl~p~p~ 316 (584)
T 2uuu_A 238 FSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHIILGSE-GTLGIITEAVMKVHAVPQ 316 (584)
T ss_dssp GCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHHHTTCT-TSSCEEEEEEEECEECCS
T ss_pred CeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhhhccCC-CCcEEEEEEEEEEEeccc
Confidence 57899999999999999999999999999999999999875 3346899999999999 899999999999999998
Q ss_pred eEE
Q 045207 153 TVT 155 (350)
Q Consensus 153 ~~~ 155 (350)
...
T Consensus 317 ~~~ 319 (584)
T 2uuu_A 317 AVE 319 (584)
T ss_dssp EEE
T ss_pred ceE
Confidence 544
No 17
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.94 E-value=3.1e-26 Score=226.49 Aligned_cols=144 Identities=18% Similarity=0.233 Sum_probs=129.0
Q ss_pred ceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCe-EEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEec-cCCCcceec
Q 045207 4 LEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSI-NVDVENEIACVQSSATIGQLYYKIAEKSKILAFLA-GICHSVGVD 81 (350)
Q Consensus 4 ~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i-~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~-g~~~~vgv~ 81 (350)
+|++++|||||+.+.+.. ..++++|||++||+| ++|+++++|+||||+++.+|.++|.++|+ .+|. ++++.++||
T Consensus 41 ~~v~~~G~G~s~~~~~~~-~~~g~vi~l~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~l~~~Gl--~l~~~~~~~~~tvG 117 (422)
T 2vfr_A 41 ARVRVLGSGHSFNEIAEP-GDGGVLLSLAGLPSVVDVDTAARTVRVGGGVRYAELARVVHARGL--ALPNMASLPHISVA 117 (422)
T ss_dssp SSEEECSSCCCCSSTTCC-CTTCEEECSTTSCCCEEEETTTTEEEEETTCBHHHHHHHHHHTTE--ECSCCCSSSCSBHH
T ss_pred CCEEEEECCCCCCCCccC-CCCcEEEEhhhCCCcEEEcCCCCEEEEcCCCCHHHHHHHHHHcCC--cccCCCCCCCeeHH
Confidence 689999999999987762 235899999999997 89999999999999999999999999874 4554 888889999
Q ss_pred cccccCccCCccccccchhhceeEEEEEccCCcEEe-ccCCCcchhhhhhhcCCCceEEEEEEEEEEeecCceE
Q 045207 82 GHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLD-RESMGEDLFWAILVGGGASFGVIIAWKIKLVTVPQTV 154 (350)
Q Consensus 82 G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~~~~ 154 (350)
|++++|++|.. .+||..+|+|+++++|++||++++ +..+++ ||+++|++ |+|||||++|||++|.|+..
T Consensus 118 G~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~~~~g~~-G~lGvit~~~l~l~p~~~~~ 187 (422)
T 2vfr_A 118 GSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FGGAVTSL-GALGVVTSLTLDLEPAYEME 187 (422)
T ss_dssp HHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GGGTSSCT-TTTCEEEEEEEECEECCEEE
T ss_pred HHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cceEEecC-CCCEEEEEEEEEEEecCceE
Confidence 99999999976 689999999999999999999997 655665 99999998 89999999999999998754
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.93 E-value=1.3e-25 Score=227.41 Aligned_cols=151 Identities=23% Similarity=0.299 Sum_probs=126.7
Q ss_pred CCCceEEEEcCCCCcC-CCccccCCCeEEEEcCCCCCe-EEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEecc---CC
Q 045207 1 KHGLEIRVRGGGHYFE-GVSYVSNVPLIIIDLINLSSI-NVDVENEIACVQSSATIGQLYYKIAEKSKILAFLAG---IC 75 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~-g~~~~~~~~gividl~~~~~i-~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g---~~ 75 (350)
++++||++||+|||+. |.+.....++|+|||++||+| ++|+++++|+||||+++.+|+++|.++|+. ++.+ ..
T Consensus 78 ~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~--~~~~~~p~~ 155 (520)
T 1wvf_A 78 EHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLP--VMLSFSAPS 155 (520)
T ss_dssp HHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCS--EECCCCSSC
T ss_pred HCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHHHHHHHHHcCCc--ccCCCCCCC
Confidence 3689999999999986 654431124899999999998 999999999999999999999999998754 4433 33
Q ss_pred CcceeccccccCccCCccccccchhhceeEEEEEccCCcEEe-cc--CCCcchhhhhhhcCC---------CceEEEEEE
Q 045207 76 HSVGVDGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLD-RE--SMGEDLFWAILVGGG---------ASFGVIIAW 143 (350)
Q Consensus 76 ~~vgv~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~--~~~~dLfwa~rG~g~---------g~~Givt~~ 143 (350)
..+||||+++++|.|.. +||..+|+|++++||++||++++ +. .+++|+|++.||+.| ++|||||++
T Consensus 156 ~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~ 233 (520)
T 1wvf_A 156 AIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKM 233 (520)
T ss_dssp TTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEE
T ss_pred CeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccCCceEEEEEE
Confidence 36889999999998886 89999999999999999999997 32 467898777777652 499999999
Q ss_pred EEEEeecCceEE
Q 045207 144 KIKLVTVPQTVT 155 (350)
Q Consensus 144 t~k~~p~~~~~~ 155 (350)
+||++|.|+...
T Consensus 234 ~l~l~p~p~~~~ 245 (520)
T 1wvf_A 234 GFWLMPKPPVFK 245 (520)
T ss_dssp EEECEECCSEEE
T ss_pred EEEEEecCCeEE
Confidence 999999998654
No 19
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.91 E-value=2.4e-24 Score=216.99 Aligned_cols=149 Identities=14% Similarity=0.201 Sum_probs=121.4
Q ss_pred CCCceEEEEcCCCCcCCCccccC---CCeEEEEcC-CCCCeEEeCC--CCEEEEcCCCcHHHHHHHHHHhCCceEEec-c
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVSN---VPLIIIDLI-NLSSINVDVE--NEIACVQSSATIGQLYYKIAEKSKILAFLA-G 73 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~~---~~gividl~-~~~~i~~d~~--~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~-g 73 (350)
++++||+++|+|||+.+.+...+ +++|+|||+ +||+|++|++ .++|+||||+++.+|+++|.++| +.++. +
T Consensus 51 ~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~G--L~l~~~~ 128 (540)
T 3js8_A 51 DNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAG--LGVTAAP 128 (540)
T ss_dssp HHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTT--EECSCCC
T ss_pred HcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcC--CEEEecC
Confidence 36899999999999964332221 258999995 7999999985 68999999999999999999987 55553 4
Q ss_pred CCCcceeccccccCccCCc----------cccccchhhceeEEEEEccCCc-----EEeccCCCcchhhhhhhcCCCceE
Q 045207 74 ICHSVGVDGHFSGRGYGLL----------LRKYGLAADHVVDAHLIDVEGR-----FLDRESMGEDLFWAILVGGGASFG 138 (350)
Q Consensus 74 ~~~~vgv~G~~~gGg~G~~----------s~~~G~~~d~v~~~~vV~a~G~-----~~~~~~~~~dLfwa~rG~g~g~~G 138 (350)
.++.++|||++++|++|.. +++||+.+|+|++++||++||+ +++...+++|||++ |+|. |+ |
T Consensus 129 gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG~~~~~~i~~~s~~~~DL~a~-r~G~-G~-g 205 (540)
T 3js8_A 129 APGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDKASGAYALRKFARNDPQIAPL-LAHV-GR-S 205 (540)
T ss_dssp SCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEETTTTEEEEEEEETTSGGGHHH-HTCT-TS-S
T ss_pred CCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCCCCceeeEEEeCCCChhHHHH-HhcC-CC-e
Confidence 4677899999999998886 6899999999999999999998 66622368998555 5555 45 5
Q ss_pred EEEEEEEEEeecCceE
Q 045207 139 VIIAWKIKLVTVPQTV 154 (350)
Q Consensus 139 ivt~~t~k~~p~~~~~ 154 (350)
|||++|||++|.+...
T Consensus 206 IVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 206 LIVEATLQAAPNQRLR 221 (540)
T ss_dssp CEEEEEEEEEECCEEE
T ss_pred EEEEEEEEEEECCceE
Confidence 9999999999998654
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.91 E-value=4e-24 Score=218.28 Aligned_cols=153 Identities=16% Similarity=0.144 Sum_probs=123.2
Q ss_pred CCCceEEEEcCCCCcC-CCccccCCCeEEEEc-CCCCCe-EEeCCCCEEEEcCCCcHHHHHHHHHHhCCc--eEEeccCC
Q 045207 1 KHGLEIRVRGGGHYFE-GVSYVSNVPLIIIDL-INLSSI-NVDVENEIACVQSSATIGQLYYKIAEKSKI--LAFLAGIC 75 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~-g~~~~~~~~gividl-~~~~~i-~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~--~~~~~g~~ 75 (350)
++++||++||+|||+. |.+.+..+++|+||| ++||+| ++|+++++|+||||+++.+|+++|.++|+. +.+.+++.
T Consensus 92 ~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~ 171 (560)
T 1e8g_A 92 KFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDL 171 (560)
T ss_dssp HHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSS
T ss_pred HcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCC
Confidence 3689999999999986 544421124899999 999998 999999999999999999999999999865 43323444
Q ss_pred CcceeccccccCccCCccccccchhhceeEEEEEccCCcEEe-ccC--CCc---------------chhhhhhhc-----
Q 045207 76 HSVGVDGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGRFLD-RES--MGE---------------DLFWAILVG----- 132 (350)
Q Consensus 76 ~~vgv~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~~~~-~~~--~~~---------------dLfwa~rG~----- 132 (350)
...||||+++++|.|+. +||..+|+|++++||++||++++ +.. .++ +++|+++++
T Consensus 172 ~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~ 249 (560)
T 1e8g_A 172 GGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPY 249 (560)
T ss_dssp TTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCC
T ss_pred CccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccccccchhhhhhhhcccccccccCCcc
Confidence 46779999999998875 89999999999999999999997 332 221 667776643
Q ss_pred -----CCCceEEEEEEEEEEeecCceEE
Q 045207 133 -----GGASFGVIIAWKIKLVTVPQTVT 155 (350)
Q Consensus 133 -----g~g~~Givt~~t~k~~p~~~~~~ 155 (350)
.+|+|||||++|||++|.|+...
T Consensus 250 l~~L~~~GtlGiIt~~tl~l~p~p~~~~ 277 (560)
T 1e8g_A 250 IDGLFSQSNMGIVTKIGIWLMPNPGGYQ 277 (560)
T ss_dssp CGGGGSSSSSEEEEEEEEECEECCSCEE
T ss_pred hhcccccCcEEEEEEEEEEEEeCCCceE
Confidence 12799999999999999998644
No 21
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.91 E-value=3e-24 Score=219.12 Aligned_cols=149 Identities=13% Similarity=0.152 Sum_probs=123.3
Q ss_pred CCceEEEEcCCCCcCCCccccC---CCeEEEEc-CCCCCeEEeC--CCCEEEEcCCCcHHHHHHHHHHhCCceEEec-cC
Q 045207 2 HGLEIRVRGGGHYFEGVSYVSN---VPLIIIDL-INLSSINVDV--ENEIACVQSSATIGQLYYKIAEKSKILAFLA-GI 74 (350)
Q Consensus 2 ~~~~~~~~ggGhs~~g~~~~~~---~~gividl-~~~~~i~~d~--~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~-g~ 74 (350)
+++||.++|+|||+.+.++..+ .++++||| ++||+|++|+ +.++|+||||+++.+|.++|.++| +.++. +.
T Consensus 58 ~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~G--l~l~~~~~ 135 (561)
T 2i0k_A 58 HDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHD--LGWANLPA 135 (561)
T ss_dssp HTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTT--EECSSCCS
T ss_pred CCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcC--CcccccCC
Confidence 5799999999999976554332 24899999 8999999999 889999999999999999999987 44443 33
Q ss_pred CCcceeccccccCccCCc----------cccccchhhceeEEEEEccCCc---EEeccCCCcchhhhhhhcCCCceEEEE
Q 045207 75 CHSVGVDGHFSGRGYGLL----------LRKYGLAADHVVDAHLIDVEGR---FLDRESMGEDLFWAILVGGGASFGVII 141 (350)
Q Consensus 75 ~~~vgv~G~~~gGg~G~~----------s~~~G~~~d~v~~~~vV~a~G~---~~~~~~~~~dLfwa~rG~g~g~~Givt 141 (350)
.+.++|||.+.+|++|.. +++||..+|+|++++||++||+ +++-..+++||+|+++|.| + ||||
T Consensus 136 ~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G-~--giIt 212 (561)
T 2i0k_A 136 PGVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG-R--CFLT 212 (561)
T ss_dssp CTTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT-S--SCEE
T ss_pred CCCcccCCCcccCCcccccccCCcccccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC-C--EEEE
Confidence 455788898877777764 6779999999999999999999 6662234889999999665 4 8999
Q ss_pred EEEEEEeecCceEE
Q 045207 142 AWKIKLVTVPQTVT 155 (350)
Q Consensus 142 ~~t~k~~p~~~~~~ 155 (350)
++|||++|.++...
T Consensus 213 ~~tl~l~p~~~~~~ 226 (561)
T 2i0k_A 213 SVTMQAGPNFRQRC 226 (561)
T ss_dssp EEEEECEECCEEEE
T ss_pred EEEEEEEECCceEE
Confidence 99999999987543
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.90 E-value=3.9e-24 Score=217.91 Aligned_cols=151 Identities=13% Similarity=0.096 Sum_probs=127.7
Q ss_pred CCCceEEEEcCCCCcCCCccccCC----CeEEEEcCCCCCe-EEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEec---
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVSNV----PLIIIDLINLSSI-NVDVENEIACVQSSATIGQLYYKIAEKSKILAFLA--- 72 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~~~----~gividl~~~~~i-~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~--- 72 (350)
++++||+++|||||+.|.+.+.++ ++++|||++||+| ++|+ .++|+||||+++.+|.++|.++|+ .+|.
T Consensus 67 ~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aGv~l~~L~~~l~~~Gl--~~p~~~g 143 (571)
T 1f0x_A 67 TADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPGTTLYSLEKALKPLGR--EPHSVIG 143 (571)
T ss_dssp HTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECTTCBHHHHHHHHGGGTE--ECSCCCG
T ss_pred HcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcCCcCHHHHHHHHHhcCc--cCCcCCC
Confidence 378999999999999987776532 3899999999998 7995 689999999999999999999874 3432
Q ss_pred cCCCcceeccccccCccCCccccccchhh----------------ceeEEEEEccCCcEEe-cc---------------C
Q 045207 73 GICHSVGVDGHFSGRGYGLLLRKYGLAAD----------------HVVDAHLIDVEGRFLD-RE---------------S 120 (350)
Q Consensus 73 g~~~~vgv~G~~~gGg~G~~s~~~G~~~d----------------~v~~~~vV~a~G~~~~-~~---------------~ 120 (350)
++|...+|||.+++++.|..+.+||..+| +|++++||++||++++ .. .
T Consensus 144 ~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k 223 (571)
T 1f0x_A 144 SSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHA 223 (571)
T ss_dssp GGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCS
T ss_pred ccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCCcEEEecCccccccchhhhccccc
Confidence 45556689999999999999999999999 9999999999999985 31 2
Q ss_pred CC--c-----------------chhhhh--hhcCCCceEEEEEEEEEEeecCceEEE
Q 045207 121 MG--E-----------------DLFWAI--LVGGGASFGVIIAWKIKLVTVPQTVTV 156 (350)
Q Consensus 121 ~~--~-----------------dLfwa~--rG~g~g~~Givt~~t~k~~p~~~~~~~ 156 (350)
++ . ||+|++ +|++ |+||| |++|||++|.|+....
T Consensus 224 ~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~~~ 278 (571)
T 1f0x_A 224 HDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQQV 278 (571)
T ss_dssp SCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSCEE
T ss_pred ccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeEEE
Confidence 23 2 888888 9999 89999 9999999999875443
No 23
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.84 E-value=2.7e-21 Score=174.54 Aligned_cols=114 Identities=14% Similarity=0.126 Sum_probs=99.1
Q ss_pred eEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEec--cCCCcceeccccccCccCCccccccchhhceeEEEEEccCCc
Q 045207 37 INVDVENEIACVQSSATIGQLYYKIAEKSKILAFLA--GICHSVGVDGHFSGRGYGLLLRKYGLAADHVVDAHLIDVEGR 114 (350)
Q Consensus 37 i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~--g~~~~vgv~G~~~gGg~G~~s~~~G~~~d~v~~~~vV~a~G~ 114 (350)
|++|+++++|+||||+++.+|+++|.++| +.++. |+++. +|||++++|++| ++||.. |+|++++||++||+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~G--l~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~ 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTG--LFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGR 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTT--EECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSC
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcC--CEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCC
Confidence 57899999999999999999999999887 44444 56666 899999999998 889999 99999999999999
Q ss_pred EEe-cc-----CCCcchhhhhhhcCCCceEEEEEEEEEEeecCceEEEEE
Q 045207 115 FLD-RE-----SMGEDLFWAILVGGGASFGVIIAWKIKLVTVPQTVTVFT 158 (350)
Q Consensus 115 ~~~-~~-----~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~~~~~~~~ 158 (350)
+++ +. ..++||||+++|++ |+|||||+++||++|.|+....+.
T Consensus 74 i~~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~ 122 (219)
T 2yvs_A 74 RVRAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRR 122 (219)
T ss_dssp EEEEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEE
T ss_pred EEEECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEE
Confidence 996 33 23589999999998 899999999999999987665543
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.82 E-value=1.3e-20 Score=179.53 Aligned_cols=139 Identities=17% Similarity=0.112 Sum_probs=106.1
Q ss_pred CCCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHHhCC-ceEEeccCCCcce
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDVENEIACVQSSATIGQLYYKIAEKSK-ILAFLAGICHSVG 79 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~-~~~~~~g~~~~vg 79 (350)
++++|+.++|+|||+....... ++++|||++|++|++|. .+|+||||++|.+|++++.++|+ ++.++.+.+.+
T Consensus 76 ~~~~pv~v~GgGsnl~~~~~~~--~gvvI~l~~~~~I~~d~--~~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giPgT-- 149 (322)
T 3tx1_A 76 QNKIPLTILGNGSNLIIKDGGI--RGVILHLDLLQTIERNN--TQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGS-- 149 (322)
T ss_dssp HTTCCEEEESCCTTEEECTTCE--EEEEEECTTCCCEEEET--TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSB--
T ss_pred HcCCcEEEECCccCCCcCCCCC--CeEEEECCCCCcEEECC--CEEEEecCcCHHHHHHHHHHcCCcccccCCCCcch--
Confidence 3689999999999987433222 38999999999998864 59999999999999999999874 12244555544
Q ss_pred eccccccCccCCccccc-cchhhceeEEEEEccCCcEEeccCCCcchhhhhhhcCC-CceEEEEEEEEEEeecCc
Q 045207 80 VDGHFSGRGYGLLLRKY-GLAADHVVDAHLIDVEGRFLDRESMGEDLFWAILVGGG-ASFGVIIAWKIKLVTVPQ 152 (350)
Q Consensus 80 v~G~~~gGg~G~~s~~~-G~~~d~v~~~~vV~a~G~~~~~~~~~~dLfwa~rG~g~-g~~Givt~~t~k~~p~~~ 152 (350)
|||.+..++.| | |.++|+|+++++|++||++++-. ++|++|++|++.. +++||||+++||++|.|.
T Consensus 150 VGGav~~NaGg-----yGg~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 150 IGGALHMNAGA-----YGGEISDVLEAATVLTQTGELKKLK--RSELKAAYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp HHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred hHHHHHhCccC-----cccchHhhEEEEEEEcCCCCEEEec--hHHcCcchhhcccCCCCEEEEEEEEEEEeCCH
Confidence 44655533322 4 79999999999999999999721 3589999998853 368999999999999885
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.82 E-value=3.5e-20 Score=178.42 Aligned_cols=140 Identities=15% Similarity=0.033 Sum_probs=119.5
Q ss_pred CCCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeC--CCCEEEEcCCCcHHHHHHHHHHhCCceEEeccCCCcc
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDV--ENEIACVQSSATIGQLYYKIAEKSKILAFLAGICHSV 78 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~--~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~v 78 (350)
++++|+.++|+|||...... . +|+||+++ |++|+++. +..+|+||||++|.+|.+++.++|+ .|.+...
T Consensus 52 ~~~ipv~vlGgGSNll~~d~-~--~GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~~~~l~~~a~~~Gl-----~GlE~l~ 122 (357)
T 3i99_A 52 WASLPKLIIGKGSNMLFTCH-Y--TGMIVVNR-LNGIEHQQDDDYHRLHVAGGEDWPSLVSWCVEQGI-----GGLENLA 122 (357)
T ss_dssp TTTSCEEEESSCTTEEECSC-E--EEEEEEEC-CCCEEEEECSSEEEEEEETTSBHHHHHHHHHHTTC-----TTCGGGT
T ss_pred HcCCCEEEECCCcCcccCCC-C--CeEEEEcC-CCceEEeccCCceEEEEeCCCcHHHHHHHHHHcCC-----cCccccC
Confidence 47899999999999864332 2 38999998 99998853 5679999999999999999999874 3677778
Q ss_pred eeccccccCccCCccccccc-hhhceeEEEEEcc-CCcEEeccCCCcchhhhhhhcCC----CceEEEEEEEEEEeecCc
Q 045207 79 GVDGHFSGRGYGLLLRKYGL-AADHVVDAHLIDV-EGRFLDRESMGEDLFWAILVGGG----ASFGVIIAWKIKLVTVPQ 152 (350)
Q Consensus 79 gv~G~~~gGg~G~~s~~~G~-~~d~v~~~~vV~a-~G~~~~~~~~~~dLfwa~rG~g~----g~~Givt~~t~k~~p~~~ 152 (350)
+|.| ++||+..++.+.||. ++|+|+++++|++ +|++++-. +.||+|++|++.. +++||||+++||++|.+.
T Consensus 123 gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 123 LIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCcccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 8888 899999999999997 8999999999999 99999721 3589999998853 379999999999999764
No 26
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.80 E-value=3e-20 Score=177.50 Aligned_cols=135 Identities=18% Similarity=0.149 Sum_probs=105.4
Q ss_pred CCCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHHhCC-ceEEeccCCCcce
Q 045207 1 KHGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDVENEIACVQSSATIGQLYYKIAEKSK-ILAFLAGICHSVG 79 (350)
Q Consensus 1 ~~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~-~~~~~~g~~~~vg 79 (350)
++++|+.++|||||+.+..... ++++|||++||+|++|. .+|+||||+++.+|+++|.++|+ ++.+..+... +
T Consensus 70 ~~~~pv~~~GgGtnl~~~~~~~--~gvvI~l~~m~~i~id~--~~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~Pg--t 143 (326)
T 1hsk_A 70 QNEIPVTYLGNGSNIIIREGGI--RGIVISLLSLDHIEVSD--DAIIAGSGAAIIDVSRVARDYALTGLEFACGIPG--S 143 (326)
T ss_dssp HTTCCEEEESSCSSEEECTTCE--EEEEEECTTCCCEEEET--TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCS--B
T ss_pred HcCCCEEEECCCCccccCCCCC--CeEEEEeCCCCceEEcC--CEEEEeCCCcHHHHHHHHHHCCCccccccCCCcc--h
Confidence 3689999999999987544332 38999999999999874 79999999999999999999874 1112222222 3
Q ss_pred eccccccCccCCcccccc-chhhceeEEEEEccCCcEEe-ccCCCcchhhhhhhc----CCCceEEEEEEEEEEeec-Cc
Q 045207 80 VDGHFSGRGYGLLLRKYG-LAADHVVDAHLIDVEGRFLD-RESMGEDLFWAILVG----GGASFGVIIAWKIKLVTV-PQ 152 (350)
Q Consensus 80 v~G~~~gGg~G~~s~~~G-~~~d~v~~~~vV~a~G~~~~-~~~~~~dLfwa~rG~----g~g~~Givt~~t~k~~p~-~~ 152 (350)
|||.+..++.| || .++|+|+++++|++||++++ +.. |++|++|.. . | ||||+++||++|. |+
T Consensus 144 vGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~~---~~~~gyr~~~l~s~-g--gIIt~~~l~l~p~~p~ 212 (326)
T 1hsk_A 144 IGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTTK---ELELDYRNSIIQKE-H--LVVLEAAFTLAPGKMT 212 (326)
T ss_dssp HHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEETT---TTTCBTTBCHHHHT-T--CEEEEEEEECEECCHH
T ss_pred hhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEEChH---HcCCCccccccCCC-C--EEEEEEEEEEEcCCHH
Confidence 55666554433 88 99999999999999999997 332 788999873 3 3 9999999999998 54
No 27
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.77 E-value=1.4e-18 Score=166.49 Aligned_cols=139 Identities=13% Similarity=0.050 Sum_probs=117.2
Q ss_pred CCceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeE-EeCCC-CEEEEcCCCcHHHHHHHHHHhCCceEEeccCCCcce
Q 045207 2 HGLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSIN-VDVEN-EIACVQSSATIGQLYYKIAEKSKILAFLAGICHSVG 79 (350)
Q Consensus 2 ~~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~-~d~~~-~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vg 79 (350)
+++|+.++|||||+..... . +|+||+|+ |++|. ++.+. .+++||||++|.+|.+++.++|+ .|.+..++
T Consensus 37 ~~~pv~vlGgGSnll~~d~-~--~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~~~l~~~~~~~Gl-----~Gle~~~g 107 (340)
T 1uxy_A 37 EGQPVLILGEGSNVLFLED-Y--RGTVIINR-IKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGM-----PGLENLAL 107 (340)
T ss_dssp TTCCEEEESSCTTEEECSC-E--EEEEEEEC-CCCEEEEECSSEEEEEEETTSBHHHHHHHHHHTTC-----CSCGGGTT
T ss_pred cCCCEEEECCCcCCcccCC-C--CeEEEEcc-CCCcEEEecCCCeEEEEecCCCHHHHHHHHHHCCC-----CccccccC
Confidence 6899999999999764332 2 38999997 99985 56666 69999999999999999999874 46677778
Q ss_pred eccccccCccCCccccccc-hhhceeEEEEEcc-CCcEEeccCCCcchhhhhhhcCC----CceEEEEEEEEEEeecCc
Q 045207 80 VDGHFSGRGYGLLLRKYGL-AADHVVDAHLIDV-EGRFLDRESMGEDLFWAILVGGG----ASFGVIIAWKIKLVTVPQ 152 (350)
Q Consensus 80 v~G~~~gGg~G~~s~~~G~-~~d~v~~~~vV~a-~G~~~~~~~~~~dLfwa~rG~g~----g~~Givt~~t~k~~p~~~ 152 (350)
|.| ++||+..++.+.||. ++|+|+++++|++ +|++++-. +.|++|++|++.. +++||||+++||++|.+.
T Consensus 108 IPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 108 IPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp CCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred Ccc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccCcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 888 899999999999995 9999999999996 99999722 3589999998742 369999999999999863
No 28
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.76 E-value=3.8e-19 Score=165.06 Aligned_cols=134 Identities=16% Similarity=0.118 Sum_probs=111.7
Q ss_pred CceEEEEcCCCCcCCCccccCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEEeccCCCcceecc
Q 045207 3 GLEIRVRGGGHYFEGVSYVSNVPLIIIDLINLSSINVDVENEIACVQSSATIGQLYYKIAEKSKILAFLAGICHSVGVDG 82 (350)
Q Consensus 3 ~~~~~~~ggGhs~~g~~~~~~~~gividl~~~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~~~g~~~~vgv~G 82 (350)
++|+.++|+|||+.+..... ++|+||+|++|++|++|. +||||++|.+|.+++.++| + .|.+..+++.|
T Consensus 39 ~ipv~v~GgGsnll~~d~~~-~~GvVI~l~~~~~I~vd~-----~v~aG~~~~~l~~~~~~~G--l---~Gle~~~giPG 107 (268)
T 2gqt_A 39 EAPYRVLGNGSNLLVLDEGV-PERVIRLAGEFQTYDLKG-----WVGAGTLLPLLVQEAARAG--L---SGLEGLLGIPA 107 (268)
T ss_dssp TSCEEECSSSSSEEECTTCC-SSEEEEECGGGGCBCTTS-----EEETTSBHHHHHHHHHHTT--E---ESCGGGTTCCC
T ss_pred CCCeEEcCCCcCceecCCCc-CCeEEEEcCCCCCcEEcC-----EEECCCCHHHHHHHHHHcC--C---cCCccccCccc
Confidence 57999999999987533222 138999999999998652 9999999999999999987 3 36777888888
Q ss_pred ccccCccCCcccccc-chhhceeEEEEEccCCcEEeccCCCcchhhhhhhcCCCceEEEEEEEEEEeecC
Q 045207 83 HFSGRGYGLLLRKYG-LAADHVVDAHLIDVEGRFLDRESMGEDLFWAILVGGGASFGVIIAWKIKLVTVP 151 (350)
Q Consensus 83 ~~~gGg~G~~s~~~G-~~~d~v~~~~vV~a~G~~~~~~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p~~ 151 (350)
++||+..++.+.|| .++|+|+++++| +||++++-. +.|++|++|++....-||||+++||++|.+
T Consensus 108 -tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 108 -QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp -BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCCCSTTCEEEEEEECCEECC
T ss_pred -hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCCcCCCceEEEEEEEEEeCC
Confidence 89999999999999 699999999999 999999721 358999999886211149999999999985
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=96.63 E-value=0.0024 Score=59.19 Aligned_cols=134 Identities=14% Similarity=0.136 Sum_probs=80.3
Q ss_pred CceEEEEcCCCCcCCC-ccccCCCeEEEEcCC---CCCeEEeCCCCEEEEcCCCcHHHHHH--HHHHhCCc-eEE--e-c
Q 045207 3 GLEIRVRGGGHYFEGV-SYVSNVPLIIIDLIN---LSSINVDVENEIACVQSSATIGQLYY--KIAEKSKI-LAF--L-A 72 (350)
Q Consensus 3 ~~~~~~~ggGhs~~g~-~~~~~~~gividl~~---~~~i~~d~~~~~v~v~~G~~~~~l~~--~l~~~g~~-~~~--~-~ 72 (350)
+.+..+.+||++..-. .......+++||+++ |+.|+.+ ...+++|+|+++.+|.+ .+.+. +. +.. . .
T Consensus 25 ~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~tl~~l~~~~~~~~~-~~~L~~a~~~~ 101 (287)
T 1ffv_C 25 GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTVENDLISSPIVQAR-LPLLAEAAKLI 101 (287)
T ss_dssp GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCBHHHHHHCHHHHHH-CHHHHHHGGGS
T ss_pred CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcHHHHhhChHHHHH-hHHHHHHHHHh
Confidence 3578899999995321 001011379999984 6778764 44799999999999996 44432 21 110 0 1
Q ss_pred cCCC---cceeccccccCccCCccccccchhhcee-------EEEEEccCCcEEeccCCCcchhhhhhhcCCCceEEEEE
Q 045207 73 GICH---SVGVDGHFSGRGYGLLLRKYGLAADHVV-------DAHLIDVEGRFLDRESMGEDLFWAILVGGGASFGVIIA 142 (350)
Q Consensus 73 g~~~---~vgv~G~~~gGg~G~~s~~~G~~~d~v~-------~~~vV~a~G~~~~~~~~~~dLfwa~rG~g~g~~Givt~ 142 (350)
++.+ .-+|||.+..+.- ..|.+. .+++..++| .++-. -.|+|...|-..-..=-|||+
T Consensus 102 a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G-~r~i~--~~df~~g~~~t~l~~~eii~~ 169 (287)
T 1ffv_C 102 ADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNG-RRTVP--ADGFFLGTYMTLLEENEVMVE 169 (287)
T ss_dssp SCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTE-EEEEE--STTTEEETTEESCCTTCEEEE
T ss_pred CCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCc-eEEEE--HHHHhcCcccccCCCCCEEEE
Confidence 1211 2457787776521 344443 588888999 44321 237787765221011258999
Q ss_pred EEEEEeecC
Q 045207 143 WKIKLVTVP 151 (350)
Q Consensus 143 ~t~k~~p~~ 151 (350)
++|...+..
T Consensus 170 i~ip~~~~~ 178 (287)
T 1ffv_C 170 IRVPAFAQG 178 (287)
T ss_dssp EEEECCCTT
T ss_pred EEecCCCCC
Confidence 999877643
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=93.96 E-value=0.032 Score=51.58 Aligned_cols=133 Identities=18% Similarity=0.133 Sum_probs=74.4
Q ss_pred ceEEEEcCCCCcCCC-ccccCCCeEEEEcCC---CCCeEEeCCCCEEEEcCCCcHHHHHH--HHHHhCCceEE--e-ccC
Q 045207 4 LEIRVRGGGHYFEGV-SYVSNVPLIIIDLIN---LSSINVDVENEIACVQSSATIGQLYY--KIAEKSKILAF--L-AGI 74 (350)
Q Consensus 4 ~~~~~~ggGhs~~g~-~~~~~~~gividl~~---~~~i~~d~~~~~v~v~~G~~~~~l~~--~l~~~g~~~~~--~-~g~ 74 (350)
-+..+.+||++..-. ........++||+++ |+.|+. +...+++|+++++.+|.+ .+.++-..+.- . .++
T Consensus 26 ~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~~t~~~l~~~~~~~~~~p~L~~a~~~ia~ 103 (288)
T 1n62_C 26 EDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIRE--EGTDVVIGAMTTQHALIGSDFLAAKLPIIRETSLLIAD 103 (288)
T ss_dssp GGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEE--ETTEEEEETTCBHHHHHHCHHHHHHCHHHHHHHTTSSC
T ss_pred CCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEe--cCCEEEEccCCcHHHHhcChHHHHHHHHHHHHHHHhCC
Confidence 457889999995321 011112369999986 566766 455899999999999994 45443101110 0 011
Q ss_pred --CC-cceeccccccCccCCccccccchhhcee-------EEEEEccCCcEEeccCCCcchhhhhhhcCCCceEEEEEEE
Q 045207 75 --CH-SVGVDGHFSGRGYGLLLRKYGLAADHVV-------DAHLIDVEGRFLDRESMGEDLFWAILVGGGASFGVIIAWK 144 (350)
Q Consensus 75 --~~-~vgv~G~~~gGg~G~~s~~~G~~~d~v~-------~~~vV~a~G~~~~~~~~~~dLfwa~rG~g~g~~Givt~~t 144 (350)
.- ..+|||.+..+. ..+|.+. .+++..++|+ ++-. -.|+|...+-..-..=-|||++.
T Consensus 104 ~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~-r~v~--~~df~~g~~~t~l~~~eil~~i~ 171 (288)
T 1n62_C 104 PQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA-RIVA--ARDYYQGAYFTAIEPGELLTAIR 171 (288)
T ss_dssp HHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE-EEEE--HHHHEEETTEESCCTTCEEEEEE
T ss_pred HHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc-EEEE--HHHHhcCcccccCCCCCEEEEEE
Confidence 11 235788877652 1345443 5567778884 3311 12555554311001125899999
Q ss_pred EEEeec
Q 045207 145 IKLVTV 150 (350)
Q Consensus 145 ~k~~p~ 150 (350)
|...+.
T Consensus 172 ip~~~~ 177 (288)
T 1n62_C 172 IPVPPT 177 (288)
T ss_dssp EECCCT
T ss_pred eCCCCC
Confidence 976654
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=93.02 E-value=0.074 Score=52.48 Aligned_cols=134 Identities=13% Similarity=0.002 Sum_probs=79.8
Q ss_pred eEEEEcCCCCcCCCc-cccCCCeEEEEcCC---CCCeEEeCCCCEEEEcCCCcHHHHHHHHHHhCCc-e--EEe-ccCC-
Q 045207 5 EIRVRGGGHYFEGVS-YVSNVPLIIIDLIN---LSSINVDVENEIACVQSSATIGQLYYKIAEKSKI-L--AFL-AGIC- 75 (350)
Q Consensus 5 ~~~~~ggGhs~~g~~-~~~~~~gividl~~---~~~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~-~--~~~-~g~~- 75 (350)
+..+.+||++..-.- ......+++||+++ |+.|+.+ ...+++|+++++.+|.+.+.++ +. + ++. .++.
T Consensus 198 ~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~l~~~l~~~-~p~L~~a~~~ia~~q 274 (462)
T 2w3s_A 198 EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAALRAFAEGP-HPALAGLLRRFASEQ 274 (462)
T ss_dssp TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHHHHHHHTTT-CHHHHHHHTTSSCHH
T ss_pred CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHHHHHHHHHH-hHHHHHHHHHhCChh
Confidence 357789999975320 00112368999998 6778775 4479999999999999885432 21 1 000 1111
Q ss_pred --CcceeccccccCccCCccccccchhhcee----EEEEEccCCcEEeccCCCcchhhhhhhcCCCceEEEEEEEEEEee
Q 045207 76 --HSVGVDGHFSGRGYGLLLRKYGLAADHVV----DAHLIDVEGRFLDRESMGEDLFWAILVGGGASFGVIIAWKIKLVT 149 (350)
Q Consensus 76 --~~vgv~G~~~gGg~G~~s~~~G~~~d~v~----~~~vV~a~G~~~~~~~~~~dLfwa~rG~g~g~~Givt~~t~k~~p 149 (350)
+..+|||.+..+.. .+-...-++ .+++..++|+ ++ -.-.|+|...|-.--..=-|||+++|...+
T Consensus 275 IRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~-R~--vp~~dF~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 275 VRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQER-RR--MPLEDFFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp HHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBC-CC--CBGGGGEEETTEESCCTTCEEEEEEEESCC
T ss_pred heeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCce-EE--EEHHHhhcccccccCCCCcEEEEEEEecCC
Confidence 12357888877542 344555566 7778888883 32 122467766542110111589999987655
Q ss_pred c
Q 045207 150 V 150 (350)
Q Consensus 150 ~ 150 (350)
.
T Consensus 346 ~ 346 (462)
T 2w3s_A 346 P 346 (462)
T ss_dssp S
T ss_pred C
Confidence 3
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=76.59 E-value=1.6 Score=40.41 Aligned_cols=55 Identities=7% Similarity=-0.016 Sum_probs=38.1
Q ss_pred EEEEcCCCCcCCCcc-ccCCCeEEEEcCCC---CCeEEeCCCCEEEEcCCCcHHHHHHHHH
Q 045207 6 IRVRGGGHYFEGVSY-VSNVPLIIIDLINL---SSINVDVENEIACVQSSATIGQLYYKIA 62 (350)
Q Consensus 6 ~~~~ggGhs~~g~~~-~~~~~gividl~~~---~~i~~d~~~~~v~v~~G~~~~~l~~~l~ 62 (350)
..+.+||++..-.-- .......+||++++ +.|+. +...+++|+++++.+|.+.+.
T Consensus 32 a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~~~l~~~~~ 90 (305)
T 3nvz_B 32 AKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEH--GPEGISFGAACALSSVEKTLL 90 (305)
T ss_dssp CEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCBHHHHHHHHH
T ss_pred CEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEE--CCCeEEEccCCcHHHHHHHHH
Confidence 467789998642100 01113689999975 55655 456899999999999998765
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=70.70 E-value=3.3 Score=37.92 Aligned_cols=129 Identities=16% Similarity=0.118 Sum_probs=69.3
Q ss_pred EEEEcCCCCcCCCc-cccCCCeEEEEcCCC---CCeEEeCCCCEEEEcCCCcHHHHHH--HHHHhCCceE-----EeccC
Q 045207 6 IRVRGGGHYFEGVS-YVSNVPLIIIDLINL---SSINVDVENEIACVQSSATIGQLYY--KIAEKSKILA-----FLAGI 74 (350)
Q Consensus 6 ~~~~ggGhs~~g~~-~~~~~~gividl~~~---~~i~~d~~~~~v~v~~G~~~~~l~~--~l~~~g~~~~-----~~~g~ 74 (350)
..+.+||++....- ........+||++++ +.|+. +...+++|+++++.+|.+ .+.++-..+. +-...
T Consensus 27 a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~~~l~~~~~~~~~~p~L~~a~~~ias~q 104 (288)
T 1t3q_C 27 ARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQ--SAGILSVGAMVTHFRNKTDPTVAKCVPILPKVLAHVAHQA 104 (288)
T ss_dssp CEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEE--ETTEEEEETTCBHHHHHHCHHHHHHCTHHHHHHTTSSCHH
T ss_pred CEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEE--cCCEEEEcCCCcHHHHhcCHHHHHHHHHHHHHHHHhCCHH
Confidence 46788999953110 001112589999984 56665 456899999999999986 4443311110 11111
Q ss_pred C-CcceeccccccCccCCccccccchhhcee-------EEEEEccCCcEEeccCCCcchhhhhhh-cCCCceEEEEEEEE
Q 045207 75 C-HSVGVDGHFSGRGYGLLLRKYGLAADHVV-------DAHLIDVEGRFLDRESMGEDLFWAILV-GGGASFGVIIAWKI 145 (350)
Q Consensus 75 ~-~~vgv~G~~~gGg~G~~s~~~G~~~d~v~-------~~~vV~a~G~~~~~~~~~~dLfwa~rG-~g~g~~Givt~~t~ 145 (350)
. +..++||.+..+- ..+|... .+++..++|+-.-.- .|+|-..+- .- ..=-|||++.|
T Consensus 105 iRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~vp~---~dF~~g~~~t~L-~~~Eil~~I~i 171 (288)
T 1t3q_C 105 VRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRSVSA---TDFMKGHYFTDL-EAGEVLVRVEI 171 (288)
T ss_dssp HHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEEEEH---HHHEEETTEESC-CTTCEEEEEEE
T ss_pred HHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEEEEH---HHHhcCcccccC-CCCCEEEEEEe
Confidence 1 1224778776431 1345544 566677777422121 244443321 11 11258999988
Q ss_pred EEee
Q 045207 146 KLVT 149 (350)
Q Consensus 146 k~~p 149 (350)
...+
T Consensus 172 P~~~ 175 (288)
T 1t3q_C 172 PIPA 175 (288)
T ss_dssp ECCS
T ss_pred cCCC
Confidence 6543
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=66.64 E-value=3.1 Score=38.20 Aligned_cols=52 Identities=21% Similarity=0.210 Sum_probs=36.2
Q ss_pred EEEEcCCCCcCCC-ccccCCCeEEEEcCCC---CCeEEeCCCCEEEEcCCCcHHHHHH
Q 045207 6 IRVRGGGHYFEGV-SYVSNVPLIIIDLINL---SSINVDVENEIACVQSSATIGQLYY 59 (350)
Q Consensus 6 ~~~~ggGhs~~g~-~~~~~~~gividl~~~---~~i~~d~~~~~v~v~~G~~~~~l~~ 59 (350)
..+.+||++.... .........+||++++ +.|+. +...+++|+++++.+|.+
T Consensus 27 a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~~~l~~ 82 (296)
T 3hrd_C 27 PAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALSTFTQIEN 82 (296)
T ss_dssp CEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCBHHHHHH
T ss_pred eEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCcHHHHHh
Confidence 5678999996421 0001113689999986 45554 467999999999999974
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=55.24 E-value=14 Score=34.37 Aligned_cols=54 Identities=15% Similarity=0.135 Sum_probs=36.1
Q ss_pred EEEEcCCCCcCCC-ccccCCCeEEEEcCCC---CCeEEeCCCCEEEEcCCCcHHHHHHH
Q 045207 6 IRVRGGGHYFEGV-SYVSNVPLIIIDLINL---SSINVDVENEIACVQSSATIGQLYYK 60 (350)
Q Consensus 6 ~~~~ggGhs~~g~-~~~~~~~gividl~~~---~~i~~d~~~~~v~v~~G~~~~~l~~~ 60 (350)
-.+.+||+++... -........+||++++ +.|+.++ ++.+++|+++++.+|.+.
T Consensus 27 a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~vt~~~l~~~ 84 (324)
T 1rm6_B 27 TLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLA-DGSLRIGAGATLEAIAEH 84 (324)
T ss_dssp EEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECT-TSCEEEETTCBHHHHHHC
T ss_pred CEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECC-CCeEEEccCCcHHHHHhC
Confidence 4678899986321 0001113689999976 5565543 346999999999999864
No 36
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.39 E-value=91 Score=22.73 Aligned_cols=35 Identities=9% Similarity=0.231 Sum_probs=27.5
Q ss_pred CeEEeCCCCEEEEcCCCcHHHHHHHHHHhCCceEE
Q 045207 36 SINVDVENEIACVQSSATIGQLYYKIAEKSKILAF 70 (350)
Q Consensus 36 ~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~~~ 70 (350)
.+.+|...++++|..-+...+|.+.+.+.|+...+
T Consensus 48 ~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~ 82 (98)
T 2crl_A 48 DVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVL 82 (98)
T ss_dssp EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEE
T ss_pred EEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEE
Confidence 35678888999998777888999999888875433
No 37
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=22.58 E-value=1.5e+02 Score=19.41 Aligned_cols=33 Identities=18% Similarity=0.467 Sum_probs=26.9
Q ss_pred CeEEeCCCCEEEEcCCCcHHHHHHHHHHhCCce
Q 045207 36 SINVDVENEIACVQSSATIGQLYYKIAEKSKIL 68 (350)
Q Consensus 36 ~i~~d~~~~~v~v~~G~~~~~l~~~l~~~g~~~ 68 (350)
.+++|...++++|..-+...++.+++.+.|+..
T Consensus 30 ~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~ 62 (68)
T 3iwl_A 30 KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTV 62 (68)
T ss_dssp EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCE
T ss_pred EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCce
Confidence 356788888899988888999999999887653
Done!