BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045208
(176 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B5YU52|RUTB_ECO5E Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O157:H7 (strain EC4115 / EHEC)
GN=rutB PE=3 SV=1
Length = 231
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 48 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 107
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ S+ T C
Sbjct: 108 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTSIATNVC 167
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ V A + +++ F
Sbjct: 168 VESTLRDGFFLEYFGV-VLEDATHQAGPEFVQKAALFNIETF 208
>sp|C6UPN3|RUTB_ECO5T Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O157:H7 (strain TW14359 / EHEC)
GN=rutB PE=3 SV=1
Length = 230
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ S+ T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTSIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ V A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFVQKAALFNIETF 207
>sp|Q8XAU3|RUTB_ECO57 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O157:H7 GN=rutB PE=3 SV=1
Length = 230
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ S+ T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTSIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ V A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFVQKAALFNIETF 207
>sp|A7ZKB6|RUTB_ECO24 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O139:H28 (strain E24377A / ETEC)
GN=rutB PE=3 SV=1
Length = 231
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 48 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 107
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 108 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 167
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ V A + +++ F
Sbjct: 168 VESTLRDGFFLEYFGV-VLEDATHQAGPEFVQKAALFNIETF 208
>sp|D3QPK4|RUTB_ECOCB Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O55:H7 (strain CB9615 / EPEC)
GN=rutB PE=3 SV=1
Length = 244
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 61 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 120
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 121 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 180
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ V A + +++ F
Sbjct: 181 VESTLRDGFFLEYFGV-VLEDATHQAGPEFVQKAALFNIETF 221
>sp|B7NLB5|RUTB_ECO7I Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=rutB
PE=3 SV=1
Length = 230
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDAQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S+FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSSFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPDV-HAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|Q8FJ42|RUTB_ECOL6 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=rutB PE=3 SV=1
Length = 244
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 61 RPVIANIQTAVTAARTAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRNQPQLQG 120
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 121 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 180
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 181 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 221
>sp|D2NGI8|RUTB_ECOS5 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O150:H5 (strain SE15) GN=rutB PE=3
SV=1
Length = 230
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|B7MTF4|RUTB_ECO81 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O81 (strain ED1a) GN=rutB PE=3 SV=1
Length = 230
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPDV-HAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|B7M8Z6|RUTB_ECO8A Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O8 (strain IAI1) GN=rutB PE=3 SV=1
Length = 230
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|B7LFC1|RUTB_ECO55 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli (strain 55989 / EAEC) GN=rutB PE=3
SV=1
Length = 230
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|C8TNC1|RUTB_ECO26 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O26:H11 (strain 11368 / EHEC)
GN=rutB PE=3 SV=1
Length = 230
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|C8UMM7|RUTB_ECO1A Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O111:H- (strain 11128 / EHEC)
GN=rutB PE=3 SV=1
Length = 230
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|C6UFC2|RUTB_ECOBR Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli (strain B / REL606) GN=rutB PE=3
SV=1
Length = 230
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|C6EHJ6|RUTB_ECOBD Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli (strain B / BL21-DE3) GN=rutB PE=3
SV=2
Length = 230
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|B6I987|RUTB_ECOSE Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli (strain SE11) GN=rutB PE=3 SV=1
Length = 230
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRNQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|B1IV86|RUTB_ECOLC Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=rutB PE=3 SV=1
Length = 231
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 48 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 107
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 108 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 167
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPDV-HAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 168 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 208
>sp|A7ZYW6|RUTB_ECOHS Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O9:H4 (strain HS) GN=rutB PE=3 SV=1
Length = 231
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 48 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 107
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 108 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 167
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPDV-HAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 168 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 208
>sp|C8U5H3|RUTB_ECO10 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O103:H2 (strain 12009 / EHEC)
GN=rutB PE=3 SV=1
Length = 230
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRNQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|B7N3G7|RUTB_ECOLU Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
GN=rutB PE=3 SV=1
Length = 230
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPDV-HAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|D3H124|RUTB_ECO44 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O44:H18 (strain 042 / EAEC) GN=rutB
PE=3 SV=1
Length = 230
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPDV-HAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|B1LIZ4|RUTB_ECOSM Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=rutB
PE=3 SV=1
Length = 231
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 48 RPVIANIQTAVTAARAAGMLIIWFQNGWDAQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 107
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 108 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 167
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPDV-HAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 168 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 208
>sp|Q3Z3A3|RUTB_SHISS Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Shigella
sonnei (strain Ss046) GN=rutB PE=3 SV=1
Length = 244
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 61 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 120
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 121 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 180
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 181 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 221
>sp|D5CZH1|RUTB_ECOKI Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O18:K1:H7 (strain IHE3034 / ExPEC)
GN=rutB PE=3 SV=1
Length = 231
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 48 RPVIANIQTAVTAARTAGMLIIWFQNGWDEQYVEAGGPGSPNYHKSNALKTMRNQPLLQG 107
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 108 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 167
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPDV-HAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 168 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 208
>sp|Q1RDK6|RUTB_ECOUT Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli (strain UTI89 / UPEC) GN=rutB PE=3
SV=1
Length = 244
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSP---G 61
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 61 RPVIANIQTAVTAARTAGMLIIWFQNGWDEQYVEAGGPGSPNYHKSNALKTMRNQPLLQG 120
Query: 62 KVGPAVKGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTP 116
K+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T
Sbjct: 121 KL--LAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATN 178
Query: 117 NCIRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
C+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 179 VCVESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 221
>sp|A1A9R6|RUTB_ECOK1 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O1:K1 / APEC GN=rutB PE=3 SV=1
Length = 244
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSP---G 61
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 61 RPVIANIQTAVTAARTAGMLIIWFQNGWDEQYVEAGGPGSPNYHKSNALKTMRNQPLLQG 120
Query: 62 KVGPAVKGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTP 116
K+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T
Sbjct: 121 KL--LAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATN 178
Query: 117 NCIRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
C+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 179 VCVESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 221
>sp|B7MIF8|RUTB_ECO45 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=rutB
PE=3 SV=1
Length = 230
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARTAGMLIIWFQNGWDEQYVEAGGPGSPNYHKSNALKTMRNQPLLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPDV-HAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|Q0TJ56|RUTB_ECOL5 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=rutB PE=3 SV=1
Length = 230
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRNQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD L+ + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELMPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPDV-HAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|P75897|RUTB_ECOLI Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli (strain K12) GN=rutB PE=1 SV=2
Length = 230
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPKFAQKAALFNIETF 207
>sp|B1X9D2|RUTB_ECODH Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli (strain K12 / DH10B) GN=rutB PE=3
SV=1
Length = 230
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPKFAQKAALFNIETF 207
>sp|C9QZ65|RUTB_ECOD1 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB
12045 / K12 / DH1) GN=rutB PE=3 SV=2
Length = 230
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPKFAQKAALFNIETF 207
>sp|C4ZQD9|RUTB_ECOBW Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli (strain K12 / MC4100 / BW2952)
GN=rutB PE=3 SV=1
Length = 230
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L+Y V V+ DAT A P A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPKFAQKAALFNIETF 207
>sp|A1JMX8|RUTB_YERE8 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=rutB PE=3 SV=1
Length = 230
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 1 NDFIADDGLVKMDGGKV-----ILPNVIRAVEIARQRGILVVWVVR-----------EHN 44
N + ++ G + + G V I+ N+ RA+ AR GI V++ E +
Sbjct: 26 NAYASEGGYLDLAGFDVSATAPIITNIKRAITAARAAGIQVIFFQNGWDPQYVEAGGEGS 85
Query: 45 PLGRDVELFRRHRYSPGKVGPAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHS 103
P + R P +G + KG LVD L + GD + K R+S FF T L S
Sbjct: 86 PNWHKSNALKTMRKQPELMGKLLAKGDWDYALVDELQPQAGDIVIAKPRYSGFFNTQLDS 145
Query: 104 FLQGAGV-----DSVQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMK 157
L+ G+ + T C+ T D +Y V V+ DAT A PD A + +++
Sbjct: 146 ILRAKGIHHLIFTGIATNVCVESTLRDGFFFEYFGV-VLEDATHQAGPDFAQKAALYNIE 204
Query: 158 NF 159
F
Sbjct: 205 TF 206
>sp|B7UNZ4|RUTB_ECO27 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC)
GN=rutB PE=3 SV=1
Length = 230
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNYHKSNALKTMRNQPLLQG 106
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD L+ + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 107 KLLTKGSWDYQLVDELMPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPDV-HAANIVDMKNF 159
+ T D L+Y V V+ DAT A P+ A + +++ F
Sbjct: 167 VESTLRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETF 207
>sp|B8H1Q1|RUTB_CAUCN Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Caulobacter crescentus (strain NA1000 / CB15N)
GN=rutB PE=3 SV=1
Length = 238
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 68 KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNCIRQT 122
+G ELVD L + GD +L KTR+S FF + L S L+ G+ + T C+ T
Sbjct: 122 RGQWDYELVDDLTPQPGDIRLHKTRYSGFFNSQLDSVLRARGIRHLVFTGIATNVCVEST 181
Query: 123 AFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
D L+Y TV+ DAT A PD V A + +++ F
Sbjct: 182 LRDGFMLEYF-GTVLEDATHQAGPDFVQKAALFNIETF 218
>sp|Q9A4N5|RUTB_CAUCR Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Caulobacter crescentus (strain ATCC 19089 / CB15)
GN=rutB PE=3 SV=1
Length = 225
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 68 KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNCIRQT 122
+G ELVD L + GD +L KTR+S FF + L S L+ G+ + T C+ T
Sbjct: 109 RGQWDYELVDDLTPQPGDIRLHKTRYSGFFNSQLDSVLRARGIRHLVFTGIATNVCVEST 168
Query: 123 AFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
D L+Y TV+ DAT A PD V A + +++ F
Sbjct: 169 LRDGFMLEYFG-TVLEDATHQAGPDFVQKAALFNIETF 205
>sp|Q0T623|RUTB_SHIF8 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Shigella
flexneri serotype 5b (strain 8401) GN=rutB PE=3 SV=1
Length = 231
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 48 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 107
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 108 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 167
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L++ V V+ DAT A P+ A + +++ F
Sbjct: 168 VESTLRDGFFLEHFGV-VLEDATHQAGPEFAQKAALFNIETF 208
>sp|Q83RV3|RUTB_SHIFL Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Shigella
flexneri GN=rutB PE=3 SV=1
Length = 244
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 61 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 120
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 121 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 180
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L++ V V+ DAT A P+ A + +++ F
Sbjct: 181 VESTLRDGFFLEHFGV-VLEDATHQAGPEFAQKAALFNIETF 221
>sp|D2AC42|RUTB_SHIF2 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Shigella
flexneri serotype X (strain 2002017) GN=rutB PE=3 SV=1
Length = 244
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 16 KVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGKVG 64
+ ++ N+ AV AR G+L++W +P + R P G
Sbjct: 61 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 120
Query: 65 PAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNC 118
+ KGS +LVD LV + GD L K R+S FF T L S L+ G+ + T C
Sbjct: 121 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 180
Query: 119 IRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
+ T D L++ V V+ DAT A P+ A + +++ F
Sbjct: 181 VESTLRDGFFLEHFGV-VLEDATHQAGPEFAQKAALFNIETF 221
>sp|P32400|CSH_ARTSP N-carbamoylsarcosine amidase OS=Arthrobacter sp. PE=1 SV=1
Length = 264
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 14 GGKVILPNVIRAVEIARQRGILVVW---VVREHNPLGRDVELFRRHRYSPGKVGPAVKGS 70
G + I+PNV R E AR +G+ V + V R + ++ + P + PA S
Sbjct: 67 GMETIIPNVQRINEAARAKGVPVFYTTNVYRNRDASSGTNDMGLWYSKIPTETLPA--DS 124
Query: 71 RGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGVDSV-----QTPNCIRQTAFD 125
A++ D + +G+ + K R SAF T+L FL +D++ C+R T D
Sbjct: 125 YWAQIDDRIAPADGEVVIEKNRASAFPGTNLELFLTSNRIDTLIVTGATAAGCVRHTVED 184
Query: 126 AIALDYQPVTVVVDATAAATPDVHAANIVDMKN-FGIATAT 165
AIA ++P+ + + P V N+ D+ N FG +T
Sbjct: 185 AIAKGFRPI-IPRETIGDRVPGVVQWNLYDIDNKFGDVEST 224
>sp|D5VGV1|RUTB_CAUST Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 /
JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) GN=rutB PE=3
SV=1
Length = 239
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 68 KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGVD-----SVQTPNCIRQT 122
+G ELVD L + GD +L KTR+S FF + L S L+ G+ + T C+ T
Sbjct: 122 RGQWDYELVDELKPQPGDIQLHKTRYSGFFNSQLDSVLRARGIRHLVFVGIATNVCVEST 181
Query: 123 AFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
D L+Y TV+ DAT A P+ V A + ++++F
Sbjct: 182 LRDGFFLEYF-GTVLEDATHQAGPEFVQKAALFNIESF 218
>sp|A8GCT5|RUTB_SERP5 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Serratia
proteamaculans (strain 568) GN=rutB PE=3 SV=1
Length = 248
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 1 NDFIADDGLVKMDGGKV-----ILPNVIRAVEIARQRGILVVWVVR-----------EHN 44
N + + G + + G + ++ N+ RA+ AR GI V++ + +
Sbjct: 46 NAYASQGGYLDLAGFDISATAPVIANIKRAISAARAAGIKVIFFQNGWDNQYVEAGGQGS 105
Query: 45 PLGRDVELFRRHRYSPGKVGPAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHS 103
P + R P +G + +G +LVD L + GD L K R+S FF T L S
Sbjct: 106 PNWHKSNALKTMRKRPELMGKLLARGDWDYDLVDELQPQAGDIVLPKPRYSGFFNTQLDS 165
Query: 104 FLQGAGV-----DSVQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMK 157
L+ G+ + T C+ T D L+Y + V+ DAT A P A + +++
Sbjct: 166 LLRSYGIHHLVFTGIATNVCVESTLRDGFFLEYFGI-VLADATHQAGPQFAQQAALYNIE 224
Query: 158 NF 159
F
Sbjct: 225 TF 226
>sp|B0SW60|RUTB_CAUSK Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Caulobacter sp. (strain K31) GN=rutB PE=3 SV=1
Length = 233
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 68 KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGVD-----SVQTPNCIRQT 122
+G +LVD L GD +L KTR+S FF + L S L+ G+ + T C+ T
Sbjct: 116 RGGWDYDLVDALKPEPGDIQLHKTRYSGFFNSQLDSVLRSRGIRHLVFVGIATNVCVEST 175
Query: 123 AFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNF 159
D L+Y TV+ DAT A PD V A + +++ F
Sbjct: 176 LRDGFFLEYFG-TVLEDATHQAGPDFVQKAALYNIETF 212
>sp|Q88FY5|NICF_PSEPK Maleamate amidohydrolase OS=Pseudomonas putida (strain KT2440)
GN=nicF PE=1 SV=1
Length = 213
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 14 GGKVILPNVIRAVE-------IARQRGILVVWV-VREHNPLGRDVELFRRHRYSPGKVGP 65
G + P V+ AVE +AR G LVV +R P D ++ R +P +
Sbjct: 40 GAPLYAPGVVAAVEQAAGLLALARDCGTLVVHTNIRYQPPHFADGGVWVRK--AP-VMKD 96
Query: 66 AVKGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGVDSV-----QTPNCIR 120
V+G+ A + + + G+ L K SAFFAT L L GVD+V T CIR
Sbjct: 97 MVEGNPLAAFCEAVAPQAGEVVLSKQYASAFFATSLAPLLHAQGVDTVVLAGCSTSGCIR 156
Query: 121 QTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKN 158
+A DA+ ++ + VV + D H AN+ D+ +
Sbjct: 157 ASAVDAMQHGFRTI-VVRECVGDRHSDPHEANLFDIDS 193
>sp|B9JLT8|RUTB_AGRRK Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868)
GN=rutB PE=3 SV=1
Length = 246
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 14 GGKVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSPGK 62
G K + N+ + ++ AR G+ V++ +P + R P
Sbjct: 62 GAKGTIANIKKTLDAARAAGVQVIYFQNGWDKDYVEAGGPGSPNYHKSNALKTMRQRPEL 121
Query: 63 VGPAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTP 116
G + KG+ +VD L + GD + KTR+S FF T++ S L+ G+ + + T
Sbjct: 122 QGQLLAKGTWDYAIVDELQPQPGDILVPKTRYSGFFNTNMDSVLRARGIRNLVFVGIATN 181
Query: 117 NCIRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNFGIATATLQEWSERVAD 175
C+ + DA L+Y V ++ DAT PD + A + +++ F AT+ ++ V+
Sbjct: 182 VCVESSLRDAFHLEYFGV-MLEDATHHLGPDFIQQATVYNVEKFFGWVATVNDFCATVSQ 240
Query: 176 A 176
A
Sbjct: 241 A 241
>sp|P58760|RUTB_AGRT5 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=rutB PE=3 SV=1
Length = 228
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 12 MDGGKVILPNVIRAVEIARQRGILVVWVVR-----------EHNPLGRDVELFRRHRYSP 60
+ G K + N+ + ++ AR G+ V++ +P + R P
Sbjct: 42 ISGAKGTIANIKKTLDAARAAGVQVIYFQNGWDKDYVEAGGPGSPNWHKSNALKTMRKRP 101
Query: 61 GKVGPAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQ 114
G + KG+ +VD L + GD + KTR+S FF T++ S L+ G+ + +
Sbjct: 102 ELQGQLLAKGTWDYAIVDELQPQPGDILVPKTRYSGFFNTNMDSVLRARGIRNLVFVGIA 161
Query: 115 TPNCIRQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNFGIATATLQEWSERV 173
T C+ + DA L+Y V ++ DAT PD + A + +++ F AT+ ++ +
Sbjct: 162 TNVCVESSLRDAFHLEYFGV-MLEDATHHLGPDFIQQATVYNVEKFFGWVATVNDFCGVI 220
Query: 174 ADA 176
+ A
Sbjct: 221 SQA 223
>sp|A4W924|RUTB_ENT38 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Enterobacter sp. (strain 638) GN=rutB PE=3 SV=1
Length = 230
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 68 KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGV-----DSVQTPNCIRQT 122
KG +LVD LV GD L K R+S FF T L S L+ G+ + T C+ T
Sbjct: 111 KGGWDYQLVDELVPEPGDIVLPKPRYSGFFNTPLDSLLRSRGIRHLIFTGIATNVCVEST 170
Query: 123 AFDAIALDYQPVTVVVDATAAATPDV-HAANIVDMKNFGIATATLQEWSERVA 174
D L+Y V V+ DAT A P+ A + +++ F +T+ ++ + V+
Sbjct: 171 LRDGFFLEYFGV-VLEDATHQAGPEFAQKAALFNIETFFGWVSTVADFCDAVS 222
>sp|A7ME53|RUTB_CROS8 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=rutB
PE=3 SV=1
Length = 232
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 24/182 (13%)
Query: 1 NDFIADDGLVKMDGGKV-----ILPNVIRAVEIARQRGILVVWVVR-----------EHN 44
N + + G + + G V ++ N+ AV AR+ G+ +VW +
Sbjct: 29 NAYASQGGYLDLAGFDVSSTAPVIENIKTAVAAAREAGMTIVWFQNGWDSDYLEAGGPGS 88
Query: 45 PLGRDVELFRRHRYSPGKVGPAV-KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHS 103
P + R P G + KG +LVD L GD L K R+S FF T L S
Sbjct: 89 PNFHKSNALKTMRRCPELHGKLLAKGGWDYQLVDELTPLPGDIVLPKPRYSGFFNTPLDS 148
Query: 104 FLQGAGV-----DSVQTPNCIRQTAFDAIALDYQPVTVVVDAT-AAATPDVHAANIVDMK 157
L+ + + T C+ T D L+Y V V+ DAT A P A + +++
Sbjct: 149 MLRARNIRHLVFTGIATNVCVESTLRDGFFLEYFGV-VLEDATHQAGPPFAQQAALFNIE 207
Query: 158 NF 159
F
Sbjct: 208 TF 209
>sp|P94573|YWOC_BACSU Uncharacterized isochorismatase family protein YwoC OS=Bacillus
subtilis (strain 168) GN=ywoC PE=3 SV=2
Length = 189
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 8 GLVKMDGGKVILPNVIRAV-EIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPA 66
G+V +D ++PN + V E + G + V H+ G D + P + G
Sbjct: 22 GIVPIDQSGQVVPNAKKLVDEFRKHNGFISFVNVAFHD--GADA--LKPQTDEPAQGGSG 77
Query: 67 VKGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQ 121
+ AE V + +++GDY + K ++ AFF T L L+ G+D+ + T +
Sbjct: 78 EMPADWAEFVPEIGVQDGDYTVTKRQWGAFFGTDLDLQLRRRGIDTIVLCGIATNIGVES 137
Query: 122 TAFDAIALDYQPVTVVVDATAAATPDVHAANI 153
TA +A L YQ + + DA + + + H A +
Sbjct: 138 TAREAFQLGYQQI-FITDAMSTFSDEEHEATL 168
>sp|D0LI56|RUTB_HALO1 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB
OS=Haliangium ochraceum (strain DSM 14365 / JCM 11303 /
SMP-2) GN=rutB PE=3 SV=1
Length = 241
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 68 KGSRGAELVDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQT 122
+G LVDGL + GD ++ K R+SAFF + L S L+ G+ + + T C+ T
Sbjct: 125 RGGWDYALVDGLKPQPGDIQVHKPRYSAFFHSQLDSVLRARGIRNLVFVGIATNVCVEST 184
Query: 123 AFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNFGIATATLQEWS 170
D L+Y V ++ DAT P+ V AA + +++ F +T++++
Sbjct: 185 LRDGFHLEYFCV-LLEDATHHLGPEFVQAATVYNVEKFFGWVSTVEDFC 232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,056,765
Number of Sequences: 539616
Number of extensions: 2639233
Number of successful extensions: 6290
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6167
Number of HSP's gapped (non-prelim): 87
length of query: 176
length of database: 191,569,459
effective HSP length: 110
effective length of query: 66
effective length of database: 132,211,699
effective search space: 8725972134
effective search space used: 8725972134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)