Query 045208
Match_columns 176
No_of_seqs 114 out of 1180
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 19:13:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045208.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045208hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hu5_A Isochorismatase family 100.0 6.1E-43 2.1E-47 262.9 15.9 173 1-175 18-195 (204)
2 3hb7_A Isochorismatase hydrola 100.0 1.1E-42 3.9E-47 261.4 16.2 164 1-175 17-188 (204)
3 3irv_A Cysteine hydrolase; str 100.0 4.5E-41 1.5E-45 257.4 15.0 172 1-175 32-219 (233)
4 3lqy_A Putative isochorismatas 100.0 5E-40 1.7E-44 244.5 14.3 157 1-173 17-190 (190)
5 3ot4_A Putative isochorismatas 100.0 3.2E-40 1.1E-44 252.8 13.1 170 1-175 54-228 (236)
6 3eef_A N-carbamoylsarcosine am 100.0 9.9E-41 3.4E-45 246.8 7.0 159 1-174 12-176 (182)
7 3o94_A Nicotinamidase; hydrola 100.0 1E-39 3.5E-44 246.0 12.3 160 1-167 32-205 (211)
8 3kl2_A Putative isochorismatas 100.0 4.5E-40 1.5E-44 250.8 10.4 173 1-174 35-219 (226)
9 1nba_A N-carbamoylsarcosine am 100.0 3E-39 1E-43 251.1 13.9 169 1-174 54-232 (264)
10 3tg2_A Vibriobactin-specific i 100.0 2.5E-39 8.4E-44 246.0 12.7 165 1-175 38-207 (223)
11 3r2j_A Alpha/beta-hydrolase-li 100.0 1.3E-39 4.4E-44 248.0 9.1 167 1-175 44-226 (227)
12 1j2r_A Hypothetical isochorism 100.0 1.3E-37 4.5E-42 233.0 16.3 166 1-173 29-199 (199)
13 3mcw_A Putative hydrolase; iso 100.0 7.5E-38 2.6E-42 234.1 14.7 155 1-174 22-192 (198)
14 1im5_A 180AA long hypothetical 100.0 1.7E-37 5.8E-42 229.0 16.3 156 1-165 13-179 (180)
15 3oqp_A Putative isochorismatas 100.0 1.2E-37 4.1E-42 235.0 14.8 158 1-175 16-188 (211)
16 4h17_A Hydrolase, isochorismat 100.0 1E-37 3.6E-42 233.2 13.3 150 1-170 33-197 (197)
17 3gbc_A Pyrazinamidase/nicotina 100.0 2E-38 6.8E-43 235.1 9.0 160 1-166 11-185 (186)
18 1nf9_A Phenazine biosynthesis 100.0 2.7E-38 9.3E-43 238.1 9.4 161 1-170 41-206 (207)
19 3v8e_A Nicotinamidase; hydrola 100.0 1.6E-38 5.4E-43 240.6 7.8 164 1-165 11-215 (216)
20 2wt9_A Nicotinamidase; hydrola 100.0 4.6E-37 1.6E-41 235.4 15.4 167 1-173 40-235 (235)
21 3txy_A Isochorismatase family 100.0 3E-37 1E-41 231.1 12.5 168 1-175 23-195 (199)
22 2fq1_A Isochorismatase; ENTB, 100.0 5.8E-36 2E-40 235.6 10.7 165 1-172 42-211 (287)
23 2a67_A Isochorismatase family 100.0 8.3E-35 2.8E-39 212.3 13.9 143 1-166 14-167 (167)
24 1yac_A Ycacgp, YCAC gene produ 100.0 4.8E-32 1.6E-36 204.1 12.2 145 1-174 22-173 (208)
25 2b34_A F35G2.2, MAR1 ribonucle 100.0 1.8E-31 6.1E-36 199.6 10.5 140 1-174 24-169 (199)
26 1yzv_A Hypothetical protein; s 100.0 4.4E-31 1.5E-35 198.1 10.2 140 1-173 30-180 (204)
27 1x9g_A Putative MAR1; structur 100.0 2E-30 6.9E-35 193.9 12.8 138 1-174 30-177 (200)
28 1qwg_A PSL synthase;, (2R)-pho 70.4 13 0.00043 28.1 6.3 63 102-165 61-132 (251)
29 3uqz_A DNA processing protein 51.0 32 0.0011 26.4 5.6 53 116-173 227-280 (288)
30 2o8r_A Polyphosphate kinase; s 50.3 18 0.00063 31.4 4.6 52 113-165 380-431 (705)
31 1v77_A PH1877P, hypothetical p 46.7 13 0.00045 26.8 2.8 31 17-47 144-174 (212)
32 2nu8_A Succinyl-COA ligase [AD 46.1 93 0.0032 23.4 8.1 62 100-164 55-119 (288)
33 1byr_A Protein (endonuclease); 45.9 47 0.0016 21.9 5.4 47 116-164 39-85 (155)
34 1u83_A Phosphosulfolactate syn 44.9 74 0.0025 24.2 6.7 63 101-165 82-156 (276)
35 2f9i_B Acetyl-coenzyme A carbo 41.8 18 0.00061 27.7 2.9 37 2-42 129-165 (285)
36 3gf3_A Glutaconyl-COA decarbox 41.2 19 0.00067 30.5 3.3 38 1-42 113-150 (588)
37 3pdw_A Uncharacterized hydrola 40.2 23 0.00078 25.8 3.3 36 3-40 10-45 (266)
38 1pix_A Glutaconyl-COA decarbox 37.7 29 0.00099 29.4 3.8 38 1-42 112-149 (587)
39 3iav_A Propionyl-COA carboxyla 37.1 20 0.00067 30.1 2.6 38 1-42 104-141 (530)
40 3guv_A Site-specific recombina 36.2 99 0.0034 20.9 5.9 18 123-141 98-115 (167)
41 1xpj_A Hypothetical protein; s 35.9 68 0.0023 20.6 4.8 38 3-40 5-47 (126)
42 3maj_A DNA processing chain A; 35.9 58 0.002 26.0 5.1 53 117-174 249-302 (382)
43 2pr7_A Haloacid dehalogenase/e 35.5 51 0.0017 20.7 4.1 34 5-40 8-41 (137)
44 2c71_A Glycoside hydrolase, fa 35.4 90 0.0031 22.3 5.8 48 123-172 142-191 (216)
45 2bzr_A Propionyl-COA carboxyla 34.7 22 0.00075 29.9 2.6 38 1-42 115-152 (548)
46 3u9r_B MCC beta, methylcrotony 34.7 22 0.00076 29.9 2.6 38 1-42 128-165 (555)
47 2f9y_B Acetyl-coenzyme A carbo 34.0 39 0.0013 26.0 3.7 37 2-42 126-162 (304)
48 3qgm_A P-nitrophenyl phosphata 33.4 38 0.0013 24.5 3.6 35 4-40 13-47 (268)
49 3n6r_B Propionyl-COA carboxyla 33.2 25 0.00084 29.5 2.6 38 1-42 112-149 (531)
50 1x0u_A Hypothetical methylmalo 32.6 25 0.00086 29.3 2.6 38 1-42 98-135 (522)
51 3rzi_A Probable 3-deoxy-D-arab 32.2 41 0.0014 27.5 3.6 36 8-43 330-368 (462)
52 2yv1_A Succinyl-COA ligase [AD 32.0 1.6E+02 0.0056 22.2 7.7 62 100-164 61-125 (294)
53 4ggj_A Mitochondrial cardiolip 31.9 42 0.0014 23.7 3.5 48 113-164 68-115 (196)
54 1on3_A Methylmalonyl-COA carbo 31.9 25 0.00085 29.4 2.5 38 1-42 102-139 (523)
55 2x24_A Acetyl-COA carboxylase; 31.4 25 0.00085 31.0 2.4 38 1-42 128-165 (793)
56 1xdp_A Polyphosphate kinase; P 30.6 23 0.0008 30.6 2.1 51 113-164 375-425 (687)
57 2gqb_A Conserved hypothetical 30.4 12 0.00041 25.0 0.2 59 97-164 66-125 (130)
58 3p94_A GDSL-like lipase; serin 30.2 32 0.0011 23.6 2.5 27 14-40 95-121 (204)
59 1vrg_A Propionyl-COA carboxyla 29.9 28 0.00096 29.1 2.5 37 2-42 106-142 (527)
60 3mil_A Isoamyl acetate-hydroly 29.2 60 0.002 22.7 4.0 27 14-40 94-120 (240)
61 3kwl_A Uncharacterized protein 29.0 89 0.0031 25.8 5.4 45 120-166 271-326 (514)
62 1jzt_A Hypothetical 27.5 kDa p 28.7 1.2E+02 0.004 22.4 5.5 43 120-164 75-117 (246)
63 1ivn_A Thioesterase I; hydrola 27.7 61 0.0021 22.0 3.7 26 15-40 81-106 (190)
64 3epr_A Hydrolase, haloacid deh 27.4 51 0.0018 23.9 3.4 35 4-40 10-44 (264)
65 3bzy_B ESCU; auto cleavage pro 26.5 50 0.0017 20.2 2.6 20 20-39 27-46 (83)
66 3h7i_A Ribonuclease H, RNAse H 26.3 66 0.0022 24.9 3.8 38 100-138 111-153 (305)
67 3r4c_A Hydrolase, haloacid deh 26.2 82 0.0028 22.6 4.3 37 3-39 16-52 (268)
68 2jgq_A Triosephosphate isomera 25.7 1.2E+02 0.0042 22.3 5.1 49 90-139 62-122 (233)
69 3dao_A Putative phosphatse; st 25.1 89 0.003 22.9 4.4 37 3-39 25-61 (283)
70 1vp8_A Hypothetical protein AF 25.0 1.2E+02 0.0041 21.8 4.7 62 102-166 36-104 (201)
71 3m9y_A Triosephosphate isomera 24.6 1.2E+02 0.0042 22.6 5.0 50 90-140 71-132 (254)
72 2vt1_B Surface presentation of 24.3 57 0.0019 20.5 2.6 20 20-39 27-46 (93)
73 3k8x_A Acetyl-COA carboxylase; 24.0 44 0.0015 29.3 2.6 37 2-42 113-149 (758)
74 2obb_A Hypothetical protein; s 24.0 55 0.0019 22.1 2.7 37 3-39 7-46 (142)
75 1mkz_A Molybdenum cofactor bio 24.0 1E+02 0.0035 21.2 4.2 46 99-145 31-83 (172)
76 3pzy_A MOG; ssgcid, seattle st 23.8 1.2E+02 0.004 20.8 4.5 50 98-148 29-83 (164)
77 3i28_A Epoxide hydrolase 2; ar 23.6 2.3E+02 0.0078 22.2 6.9 55 101-156 108-173 (555)
78 3qst_A Triosephosphate isomera 23.2 1.4E+02 0.0048 22.3 5.0 48 91-139 71-130 (255)
79 2yv2_A Succinyl-COA synthetase 23.1 2.4E+02 0.0083 21.2 8.6 62 100-164 61-126 (297)
80 2odk_A Hypothetical protein; p 23.1 49 0.0017 20.3 2.1 28 14-42 7-34 (89)
81 1r2r_A TIM, triosephosphate is 23.0 1.4E+02 0.0048 22.2 5.0 49 91-140 69-129 (248)
82 3hs2_A PHD protein, prevent HO 23.0 66 0.0023 17.8 2.5 26 16-42 7-32 (58)
83 3kkj_A Amine oxidase, flavin-c 22.8 59 0.002 22.5 2.9 19 120-139 15-33 (336)
84 2i9e_A Triosephosphate isomera 22.6 1.4E+02 0.0049 22.3 5.0 48 91-139 68-127 (259)
85 2y8u_A Chitin deacetylase; hyd 22.4 1.2E+02 0.0042 21.9 4.6 73 98-172 135-223 (230)
86 1o5x_A TIM, triosephosphate is 22.3 1.5E+02 0.005 22.1 5.0 49 90-139 68-128 (248)
87 2yc6_A Triosephosphate isomera 22.0 1.6E+02 0.0055 22.0 5.2 49 90-139 69-129 (257)
88 1oi7_A Succinyl-COA synthetase 21.9 2.6E+02 0.0087 21.0 8.2 61 101-164 56-119 (288)
89 3ta6_A Triosephosphate isomera 21.8 1.4E+02 0.0047 22.6 4.7 48 91-139 74-133 (267)
90 1yya_A Triosephosphate isomera 21.5 1.6E+02 0.0054 22.0 5.0 48 91-139 68-127 (250)
91 1ney_A TIM, triosephosphate is 21.4 1.6E+02 0.0054 21.9 5.0 48 91-139 68-127 (247)
92 3krs_A Triosephosphate isomera 21.2 1.6E+02 0.0053 22.3 5.0 48 91-139 92-151 (271)
93 2j13_A Polysaccharide deacetyl 21.2 1.4E+02 0.0049 21.7 4.8 72 98-172 159-244 (247)
94 3vus_A Poly-beta-1,6-N-acetyl- 21.1 85 0.0029 23.4 3.5 32 143-174 27-58 (268)
95 2l8b_A Protein TRAI, DNA helic 21.1 1.3E+02 0.0045 21.5 4.3 38 5-42 120-158 (189)
96 4hf7_A Putative acylhydrolase; 21.0 59 0.002 22.7 2.5 27 14-40 99-125 (209)
97 1j0a_A 1-aminocyclopropane-1-c 20.8 2.5E+02 0.0087 21.1 6.3 54 106-165 66-124 (325)
98 4d9b_A D-cysteine desulfhydras 20.8 2.8E+02 0.0097 21.1 6.9 61 105-166 76-143 (342)
99 1b9b_A TIM, protein (triosepho 20.7 1.6E+02 0.0053 22.1 4.8 48 91-139 70-129 (255)
100 1vjr_A 4-nitrophenylphosphatas 20.6 66 0.0023 23.2 2.8 35 4-40 22-56 (271)
101 1tre_A Triosephosphate isomera 20.6 1.4E+02 0.0047 22.4 4.5 48 91-139 69-128 (255)
102 3th6_A Triosephosphate isomera 20.5 1.7E+02 0.0058 21.8 5.0 48 91-139 69-128 (249)
103 4g1k_A Triosephosphate isomera 20.4 1.6E+02 0.0054 22.3 4.8 48 91-139 94-153 (272)
104 3zx4_A MPGP, mannosyl-3-phosph 20.4 55 0.0019 23.7 2.3 35 3-39 4-38 (259)
105 3t7y_A YOP proteins translocat 20.2 62 0.0021 20.5 2.2 20 20-39 42-61 (97)
No 1
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=100.00 E-value=6.1e-43 Score=262.92 Aligned_cols=173 Identities=43% Similarity=0.627 Sum_probs=157.5
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||++|+|++.+++.+.++++|++|++++|+.|+||||+...+.|++.+...++...+... .++|++|++|++++|+|.
T Consensus 18 ~~f~~~~g~l~~~~~~~iv~~i~~L~~~ar~~g~pVi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gt~g~ei~~~l~ 96 (204)
T 3hu5_A 18 NDFVLPGAPACVEGAMGTVPVIAGLLAKARAEGWMVLHVVRAHRADGSDAEKSREHLFLEG-GGLCVAGTPGAEIVAGLE 96 (204)
T ss_dssp HHHHSTTSTTCCTTHHHHHHHHHHHHHHHHHHTCEEEEEECCBCTTSTTSCGGGGGGGSSS-CCSSBTTSGGGSBCTTCC
T ss_pred hhhhCCCCcccccCHHHHHHHHHHHHHHHHHCCCeEEEEEcccCCCcccccccccccCCcc-cccccCCCcccccccccC
Confidence 6899999999999999999999999999999999999987777777766544433333222 367999999999999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHH
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVD 155 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~ 155 (176)
|.++|.+|.|++||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++++.|+.+|+.
T Consensus 97 ~~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~-V~vv~Da~as~~~~~h~~al~~ 175 (204)
T 3hu5_A 97 PASGETVLVKTRFSAFMGTECDMLLRRRGVDTLLVSGTQYPNCIRGTAVDAFALDYD-VVVVTDACSARTPGVAESNIND 175 (204)
T ss_dssp CCTTCEEEECSSSSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECSSHHHHHHHHHH
T ss_pred CCCCCEEEECCccCCCCCcCHHHHHHhCCCCeEEEeeeccchHHHHHHHHHHHCCCE-EEEehhhhCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999999999 9999999999999999999999
Q ss_pred HHhcCcEeeeHHHHHHHhhc
Q 045208 156 MKNFGIATATLQEWSERVAD 175 (176)
Q Consensus 156 l~~~g~~v~~~~e~~~~l~~ 175 (176)
|...|++|++++|+++.|..
T Consensus 176 m~~~g~~v~tt~e~l~~l~~ 195 (204)
T 3hu5_A 176 MRAMGITCVPLTALDDVLAR 195 (204)
T ss_dssp HHHHTCEEECGGGHHHHHHC
T ss_pred HHHhCCEEEEHHHHHHHHHh
Confidence 99999999999999998863
No 2
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=100.00 E-value=1.1e-42 Score=261.44 Aligned_cols=164 Identities=29% Similarity=0.481 Sum_probs=155.0
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHH---HCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCccccc
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIAR---QRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVD 77 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r---~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 77 (176)
|||++|+|.+.+++.+.++++|++|++++| +.|+|||||++.|.+.++++..|+ ++|++|++|++++|
T Consensus 17 ~~f~~~~g~l~~~~~~~ii~~i~~Ll~~ar~~~~~g~pVi~t~~~~~~~~~~~~~~~---------~~~~~gt~g~~i~~ 87 (204)
T 3hb7_A 17 NDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDADFRVRP---------LHAVKGTWGSDFIP 87 (204)
T ss_dssp TTTSSTTCTTCCGGGGGGHHHHHHHHHHHHHSSSSSEEEEEEEECBCCCSCCSSSSC---------SSCBTTSTTTSBCG
T ss_pred hhhcCCCCcccCccHHHHHHHHHHHHHHHHhhhhcCCEEEEEEccCCCCChhhhhcc---------hhccCCCchhhcCH
Confidence 799999999999999999999999999999 999999999999887766655553 45999999999999
Q ss_pred CCCCCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHH
Q 045208 78 GLVIREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAAN 152 (176)
Q Consensus 78 ~l~~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~ 152 (176)
+|.|.+++.+|.|++||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++++.|+.+
T Consensus 88 ~l~~~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~-V~vv~Da~as~~~~~h~~a 166 (204)
T 3hb7_A 88 ELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYK-VITLSDGTASKTEEMHEYG 166 (204)
T ss_dssp GGCCCTTCEEEEESSSSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECSSHHHHHHH
T ss_pred hhCCCCCCEEEeCCccCCccCccHHHHHHHCCCCEEEEEeecccHHHHHHHHHHHHCCCE-EEEechhccCCCHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999999999999 9999999999999999999
Q ss_pred HHHHHhcCcEeeeHHHHHHHhhc
Q 045208 153 IVDMKNFGIATATLQEWSERVAD 175 (176)
Q Consensus 153 l~~l~~~g~~v~~~~e~~~~l~~ 175 (176)
|..|. .|++|+++++++.+|..
T Consensus 167 l~~l~-~~a~v~tt~~vl~~l~~ 188 (204)
T 3hb7_A 167 LNDLS-IFTKVMTVDQYIQAWEN 188 (204)
T ss_dssp HHHHH-HHSEEECHHHHHHHHHC
T ss_pred HHHHH-hCCEEeeHHHHHHHHhc
Confidence 99999 99999999999999864
No 3
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=100.00 E-value=4.5e-41 Score=257.40 Aligned_cols=172 Identities=20% Similarity=0.253 Sum_probs=155.7
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||++|+|++.+++.+.++++|++|+++||+.|+|||||++.+.+++.+.+.|.+... .+..+|.+|++|++++++|.
T Consensus 32 ~~f~~~~g~l~~~~~~~vv~~i~~Ll~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~p--~~~~~~~~gt~g~ei~~~l~ 109 (233)
T 3irv_A 32 KVFCEPTGALYVKSTADIVQPIQKLLQAARAAQVMVIYLRHIVRGDGSDTGRMRDLYP--NVDQILARHDPDVEVIEALA 109 (233)
T ss_dssp HHHHSTTSTTCCGGGGGGHHHHHHHHHHHHHTTCEEEEEEECBCSSSTTCSHHHHHST--THHHHSBTTCGGGSBCGGGC
T ss_pred hhhhCCCCcccCCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCccchhhhhhhcC--cccccccCCCCccccchhhC
Confidence 6899999999999999999999999999999999999999998887766654433210 00125899999999999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCC-----------
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAA----------- 144 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~----------- 144 (176)
|.++|.+|.|++||+|++|+|.++|+++||++ ++|++||++||++|+++||+ |+|++|||+++
T Consensus 110 p~~~d~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~-V~vv~Da~as~d~~~~~~~~~~ 188 (233)
T 3irv_A 110 PQSDDVIVDKLFYSGFHNTDLDTVLRARDVDTIIVCGTVTNVCCETTIRDGVHREYK-VIALSDANAAMDYPDVGFGAVS 188 (233)
T ss_dssp CCTTSEEEEESSSCSSTTSTHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECCCBCCSSSCCBC
T ss_pred CCCCCEEEECCccCCCcCCcHHHHHHhCCCCeEEEEeecccHHHHHHHHHHHHCCCE-EEEechhhccCcccccccccCC
Confidence 99999999999999999999999999999999 99999999999999999999 99999999998
Q ss_pred CHHHHHHHHHHHHhcCcEeeeHHHHHHHhhc
Q 045208 145 TPDVHAANIVDMKNFGIATATLQEWSERVAD 175 (176)
Q Consensus 145 ~~~~h~~~l~~l~~~g~~v~~~~e~~~~l~~ 175 (176)
+++.|+.+|..|...|++|++++|++.+|..
T Consensus 189 ~~~~h~~aL~~l~~~~a~V~tt~evl~~l~~ 219 (233)
T 3irv_A 189 AADVQRISLTTIAYEFGEVTTTAEVIRRIES 219 (233)
T ss_dssp HHHHHHHHHHHHHHHTSEEECHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCcEEeEHHHHHHHHHh
Confidence 5889999999999999999999999998864
No 4
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=100.00 E-value=5e-40 Score=244.54 Aligned_cols=157 Identities=24% Similarity=0.280 Sum_probs=144.1
Q ss_pred CCccC--CCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccC
Q 045208 1 NDFIA--DDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDG 78 (176)
Q Consensus 1 ndF~~--~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 78 (176)
|||++ |+|.|.+++.+.++++|++|++.+|+.|+||||+++.|.+.. .++|.+|++|++++|+
T Consensus 17 ~~f~~~~~~g~l~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~---------------~~~~~~gt~g~~i~~~ 81 (190)
T 3lqy_A 17 NDYFSTYNGAKNPLVGTEAAAEQGAKLLAKFRQQGLPVVHVRHEFPTDE---------------APFFLPGSDGAKIHPS 81 (190)
T ss_dssp GGGCTTSTTCSSCCBTHHHHHHHHHHHHHHHHHTTCCEEEEEECC-CTT---------------CSSSCTTCGGGSBCGG
T ss_pred hhhhCcCCCCccCcCCHHHHHHHHHHHHHHHHHCCCeEEEEEEecCCCC---------------CCcccCCCCccccCcc
Confidence 68997 689999999999999999999999999999999998664321 2458999999999999
Q ss_pred CCCCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCH-------
Q 045208 79 LVIREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATP------- 146 (176)
Q Consensus 79 l~~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~------- 146 (176)
|.|.++|.+|.|++||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++.
T Consensus 82 l~~~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~-v~vv~Da~~s~~~~~~~~~~ 160 (190)
T 3lqy_A 82 VAAQEGEAVVLKHQINSFRDTDLKKVLDDAGIKKLVIVGAMTHMAIDAVTRAAEDLGYE-CAVAHDACATLDLEFNGITV 160 (190)
T ss_dssp GCCCTTSCEEEESSSSTTTTSSHHHHHHHC-CCEEEEEEECTTTHHHHHHHHHHHHTCE-EEEEEEEEEBCCEEETTEEE
T ss_pred cCCCCCCEEEECCCCCccccchHHHHHHhCCCCEEEEEecCcChHHHHHHHHHHHCCCE-EEEechhhccCCccccCccC
Confidence 9999999999999999999999999999999999 99999999999999999999 9999999999984
Q ss_pred ---HHHHHHHHHHHhcCcEeeeHHHHHHHh
Q 045208 147 ---DVHAANIVDMKNFGIATATLQEWSERV 173 (176)
Q Consensus 147 ---~~h~~~l~~l~~~g~~v~~~~e~~~~l 173 (176)
+.|+.+|..|...+++|++++|+++.|
T Consensus 161 ~a~~~h~~~L~~l~~~~a~V~tt~~~l~~l 190 (190)
T 3lqy_A 161 PAAQVHAAFMSALSFAYANVASADELIAGL 190 (190)
T ss_dssp CHHHHHHHHHHHHBTTTBEEECHHHHHTC-
T ss_pred CHHHHHHHHHHHHhhCcEEEEEHHHHHhhC
Confidence 789999999999999999999999875
No 5
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=100.00 E-value=3.2e-40 Score=252.76 Aligned_cols=170 Identities=22% Similarity=0.267 Sum_probs=151.1
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||++|++.+ .++.+.++++|++|+++||+.|+|||||++.|.++..+.+.|...... .++|++|++|++++|+|.
T Consensus 54 n~f~~~~~~~-~~~~~~vv~~i~~Ll~~aR~~g~pVI~t~~~~~~~~~~~~~~~~~~~~---~~~~~~gt~g~ei~~eL~ 129 (236)
T 3ot4_A 54 NGFADPAQFG-GGNIAAAIETTRTVLAAARERGWAVAHSRIVYADDDADGNIFSIKVPG---MLTLKEHAPASAIVPQLA 129 (236)
T ss_dssp HHHHSTTTSC-CSSHHHHHHHHHHHHHHHHHHTCEEEEEEECBCTTCTTCCHHHHHSGG---GTTCBTTCGGGSBCGGGC
T ss_pred hhhcCCCCcc-ccCHHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCccccchhhhcCCc---cccccCCCCccccCHhhc
Confidence 6889876665 467889999999999999999999999999887776666666543211 256999999999999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHH
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVD 155 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~ 155 (176)
|.++|.+|.|.+||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++++.|+.+|..
T Consensus 130 p~~~d~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~-V~vv~Da~as~~~~~h~~aL~~ 208 (236)
T 3ot4_A 130 PQAGEYVVRKSTPSAFYGTMLAAWLAQRGVQTLLVAGATTSGCVRASVVDAMSAGFR-PLVLSDCVGDRALGPHEANLFD 208 (236)
T ss_dssp CCTTCEEEEESSSSTTTTSSHHHHHHHTTCCEEEEEESCTTTHHHHHHHHHHHHTCE-EEEEEEEECCSCHHHHHHHHHH
T ss_pred ccCCceEEECCccCcccCchHHHHHHHCCCCEEEEeCccCcHHHHHHHHHHHHCCCE-EEEechhcCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999999999 9999999999999999999999
Q ss_pred HHhcCcEeeeHHHHHHHhhc
Q 045208 156 MKNFGIATATLQEWSERVAD 175 (176)
Q Consensus 156 l~~~g~~v~~~~e~~~~l~~ 175 (176)
|...|+.|++++++++.|..
T Consensus 209 m~~~~a~v~tt~evl~~L~~ 228 (236)
T 3ot4_A 209 MRQKYAAVMTHDEALAKTKG 228 (236)
T ss_dssp HHHHTSEEECHHHHHC----
T ss_pred HHhcCCEEeeHHHHHHHHHh
Confidence 99999999999999998865
No 6
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=9.9e-41 Score=246.79 Aligned_cols=159 Identities=29% Similarity=0.491 Sum_probs=146.6
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||+ +|++.+++.+.++++|++|++.+|+.|+|||||++.|.++++++..|++| |.+|++|++++|+|.
T Consensus 12 ~~f~--~g~~~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~---------~~~g~~g~~~~~~l~ 80 (182)
T 3eef_A 12 NEFI--HGRLATPEAMKTVGPARKVIETFRRSGLPVVYVNDSHYPDDPEIRIWGRH---------SMKGDDGSEVIDEIR 80 (182)
T ss_dssp HHHH--TSTTCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECBCTTSTTHHHHCSC---------SBTTSGGGSBCGGGC
T ss_pred CcCC--CCccCCccHHHHHHHHHHHHHHHHHcCCeEEEEecccCCCChhhhhcchh---------hcCCCchhhhhhhhC
Confidence 5785 58888889999999999999999999999999999999888887777554 999999999999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHH
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVD 155 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~ 155 (176)
|.++|.+|.|++||+|++|+|.++|+++|+++ ++|++||++|+++|+++||+ |+|++|||++ ++.|+.+ +.
T Consensus 81 ~~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~-V~vv~Da~as--~~~~~~a-~~ 156 (182)
T 3eef_A 81 PSAGDYVLEKHAYSGFYGTNLDMILRANGIDTVVLIGLDADICVRHTAADALYRNYR-IIVVEDAVAA--RIDPNWK-DY 156 (182)
T ss_dssp CCTTCEEEEESSSSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEEC--SSCTTHH-HH
T ss_pred CCCCcEEEeecccCCCCCCCHHHHHHhcCCCeEEEEEeccCHHHHHHHHHHHHCCCE-EEEehhhcCC--HHHHHHH-HH
Confidence 99999999999999999999999999999999 99999999999999999999 9999999999 7788999 99
Q ss_pred HHh-cCcEeeeHHHHHHHhh
Q 045208 156 MKN-FGIATATLQEWSERVA 174 (176)
Q Consensus 156 l~~-~g~~v~~~~e~~~~l~ 174 (176)
|.. +|+.|+++++++.+|.
T Consensus 157 m~~~~ga~v~~~~~vl~~l~ 176 (182)
T 3eef_A 157 FTRVYGATVKRSDEIEGMLQ 176 (182)
T ss_dssp HHHHHCCEEECTTCCCC---
T ss_pred HHHhcCcEEeEHHHHHHHhh
Confidence 999 7999999999988765
No 7
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=100.00 E-value=1e-39 Score=245.99 Aligned_cols=160 Identities=24% Similarity=0.286 Sum_probs=143.2
Q ss_pred CCccCCCCccccCC-ccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCC
Q 045208 1 NDFIADDGLVKMDG-GKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGL 79 (176)
Q Consensus 1 ndF~~~~g~l~~~~-~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l 79 (176)
|||++|+|+|.+++ .+.++++|++|++++|++|+||||+++.|.++++..+.. ..|+.+|++|++|++++|+|
T Consensus 32 ndF~~p~G~l~~~~~~~~ii~~i~~Li~~aR~~g~pVi~t~d~h~~~~~~~~~~------~~~p~hcv~gt~G~el~~~L 105 (211)
T 3o94_A 32 EDFVADSGKLTAGAPAQAISDAISKVTRLAFERGDYIFFTIDAHEENDCFHPES------KLFPPHNLIGTSGRNLYGDL 105 (211)
T ss_dssp HHHHSTTCTTCCCHHHHTTHHHHHHHHHHHHHTTCEEEEEEECBCTTCTTCGGG------GTSCSCSBTTSGGGSBCTHH
T ss_pred hhhhCCCCcccCCccHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCccCccc------ccccccccCCChhHhhcHHH
Confidence 78999999998864 789999999999999999999999999888765422110 11345699999999999999
Q ss_pred C-------CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHH
Q 045208 80 V-------IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPD 147 (176)
Q Consensus 80 ~-------~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~ 147 (176)
. |.+++++|.|.+||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++++
T Consensus 106 ~~~~~~~~p~~~d~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~Gy~-v~vv~Da~~~~~~~ 184 (211)
T 3o94_A 106 GIFYQEHGSDSRVFWMDKRHYSAFSGTDLDIRLRERRVSTVILTGVLTDISVLHTAIDAYNLGYD-IEIVKPAVASIWPE 184 (211)
T ss_dssp HHHHHHHTTSTTEEEEEESSSSSSTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECSCHH
T ss_pred HHhhhhcCCCCCcEEEEecccCcCCCchHHHHHHhCCCCeEEEEeeccChHHHHHHHHHHHCCCE-EEEechhhcCCCHH
Confidence 6 66889999999999999999999999999999 99999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHh-cCcEeeeHH
Q 045208 148 VHAANIVDMKN-FGIATATLQ 167 (176)
Q Consensus 148 ~h~~~l~~l~~-~g~~v~~~~ 167 (176)
.|+.+|+.|+. +|+.+++++
T Consensus 185 ~h~~aL~~m~~~~G~~i~ts~ 205 (211)
T 3o94_A 185 NHQFALGHFKNTLGAKLVDEN 205 (211)
T ss_dssp HHHHHHHHHHHTSCCEEECTT
T ss_pred HHHHHHHHHHHHCCcEEechh
Confidence 99999999998 899988763
No 8
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=100.00 E-value=4.5e-40 Score=250.78 Aligned_cols=173 Identities=23% Similarity=0.272 Sum_probs=150.1
Q ss_pred CCccCCCCccc-----cCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCC-CCCCCCccCCCCCcc
Q 045208 1 NDFIADDGLVK-----MDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYS-PGKVGPAVKGSRGAE 74 (176)
Q Consensus 1 ndF~~~~g~l~-----~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~ 74 (176)
|||++|+|+|. +++.++++++|++|+++||+.|+||||+++.|.+++++....+...+. ..|.++|.+|++|++
T Consensus 35 ndf~~~~g~l~~~~~~~~~~~~vv~~i~~Ll~~ar~~g~pVi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~g~e 114 (226)
T 3kl2_A 35 NEFTSDGGVLHGAVADVMQHTGMLANTVAVVDAARQAGVPIMHAPITFAEGYGELTRHPYGILKGVVDGKAFVKGTWGAA 114 (226)
T ss_dssp HHHHSTTCTTHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCEEEECCCBCTTCTTSCSSCCTHHHHHHHHTCSBTTSTTTS
T ss_pred hhhhCCCccccccccccccHHHHHHHHHHHHHHHHHcCCeEEEEEeeeCCCccccccccchhhhcccCCCcccCCCcccc
Confidence 68999999885 345789999999999999999999999999988887654321000000 002356999999999
Q ss_pred cccCCCCCCCCeeeecCC-CCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHH
Q 045208 75 LVDGLVIREGDYKLVKTR-FSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDV 148 (176)
Q Consensus 75 ~~~~l~~~~~d~v~~K~~-~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~ 148 (176)
++|+|.|.++|.+|.|.+ ||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++++.
T Consensus 115 i~~~L~p~~~d~vi~Kk~~~SaF~~t~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~-v~vv~Da~~s~~~~~ 193 (226)
T 3kl2_A 115 IVDELAPVNGDIVIEGKRGLDTFASTNLDFILRSKGVDTIVLGGFLTNCCVESTMRTGYERGFR-VITLTDCVAATSQEE 193 (226)
T ss_dssp BCGGGCCCTTCEECCCCCSSSHHHHSSHHHHHHHHTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECSCHHH
T ss_pred cCHhhCCCCCCEEEecCCccCCccCchHHHHHhCCCCCcEEEeccCcchHHHHHHHHHHHCCCE-EEEechhhcCCCHHH
Confidence 999999999999999776 99999999999999999999 99999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhcCcEeeeHHHHHHHhh
Q 045208 149 HAANIVDMKNFGIATATLQEWSERVA 174 (176)
Q Consensus 149 h~~~l~~l~~~g~~v~~~~e~~~~l~ 174 (176)
|+.+|+.|...++.|+|++|++..|-
T Consensus 194 h~~aL~~~~~~~a~v~tt~e~l~~~~ 219 (226)
T 3kl2_A 194 HNNAISYDFPMFSVPMTSADVIAALE 219 (226)
T ss_dssp HHHHHHHTHHHHSEEECHHHHHHHHC
T ss_pred HHHHHHHHHHhceEEeeHHHHHHHhh
Confidence 99999987777779999999999874
No 9
>1nba_A N-carbamoylsarcosine amidohydrolase; hydrolase(IN linear amides); 2.00A {Arthrobacter SP} SCOP: c.33.1.3
Probab=100.00 E-value=3e-39 Score=251.10 Aligned_cols=169 Identities=24% Similarity=0.296 Sum_probs=154.0
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCC-----CChhhhhhccCCCCCCCCccCCCCCccc
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLG-----RDVELFRRHRYSPGKVGPAVKGSRGAEL 75 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 75 (176)
|||+++.|.|++++.+.++++|++|++++|+.|+|||||++.|.+++ .+.+.|..+.. ...|..|++|+++
T Consensus 54 ndf~~~~g~l~~~~~~~vi~~i~~Ll~~aR~~g~pVI~t~~~~~~~~~~s~l~~~~~~~~~~p----~~~~~~gt~g~ei 129 (264)
T 1nba_A 54 NAWTQPGHPFSCPGMETIIPNVQRINEAARAKGVPVFYTTNVYRNRDASSGTNDMGLWYSKIP----TETLPADSYWAQI 129 (264)
T ss_dssp HHHHSSSSTTCCSCHHHHHHHHHHHHHHHHHHTCCEEEEEECBSCCCTTSTTCSCGGGGGTSC----GGGCBTTSGGGSB
T ss_pred HhHhCCCcccCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeccCCCccccccccccccccccc----cccccCCCCcccc
Confidence 68999889998899999999999999999999999999999887765 44556655421 1236789999999
Q ss_pred ccCCCCCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHH
Q 045208 76 VDGLVIREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHA 150 (176)
Q Consensus 76 ~~~l~~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~ 150 (176)
+|+|.|.+++.+|.|++||+|++|+|..+|+++||++ ++|++||++|+++|+++||+ |+|++|||++.+++.|+
T Consensus 130 ~~~L~p~~~d~vi~K~~~SaF~~T~L~~~Lr~~gi~~lvI~Gv~T~~CV~~Ta~dA~~~Gy~-V~Vv~DA~as~~~~~h~ 208 (264)
T 1nba_A 130 DDRIAPADGEVVIEKNRASAFPGTNLELFLTSNRIDTLIVTGATAAGCVRHTVEDAIAKGFR-PIIPRETIGDRVPGVVQ 208 (264)
T ss_dssp CGGGCCCTTCEEEEESSSSSSTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHHTCE-EEEEGGGEECSSSSHHH
T ss_pred ccccCCCCCCEEEeCCcCCCcccchHHHHHHhCCCCEEEEEecCcCCHHHHHHHHHHHCCCE-EEEeccccCCCCHHHHH
Confidence 9999999999999999999999999999999999999 99999999999999999999 99999999999999999
Q ss_pred HHHHHHHhcCcEeeeHHHHHHHhh
Q 045208 151 ANIVDMKNFGIATATLQEWSERVA 174 (176)
Q Consensus 151 ~~l~~l~~~g~~v~~~~e~~~~l~ 174 (176)
.+|+.|...++.|++++|++..|.
T Consensus 209 ~aL~~m~~~~~~vitt~e~l~~L~ 232 (264)
T 1nba_A 209 WNLYDIDNKFGDVESTDSVVQYLD 232 (264)
T ss_dssp HHHHHHHHHTCEEECHHHHHHHHH
T ss_pred HHHHHHHhcCcEEeEHHHHHHHHh
Confidence 999999998889999999998875
No 10
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=100.00 E-value=2.5e-39 Score=245.99 Aligned_cols=165 Identities=23% Similarity=0.219 Sum_probs=145.9
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||+++.+. ..+..+.+++||++|+++||+.|+|||||++.|.++..+...+..+. ...++++++++++|.
T Consensus 38 ~~F~~~~~~-~~~~~~~vv~~i~~Li~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~~eL~ 108 (223)
T 3tg2_A 38 EYFVHYFDS-QAEPIPSLIKHIQQLKAHAKQAGIPVVYTAQPANQDPAERALLSDFW--------GPGLSEETAIIAPLA 108 (223)
T ss_dssp HHHHTTBCT-TSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCSSCCHHHHTTHHHHH--------CSCCSSCCSBCGGGC
T ss_pred hhhhCcccc-ccccHHHHHHHHHHHHHHHHHcCCeEEEEEEeCCCCchhhccccccc--------CCCCCcccccChhhC
Confidence 688875443 35667899999999999999999999999999887765544443321 122477899999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHH
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVD 155 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~ 155 (176)
|.++|.+|.|.+||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++++.|+.+|+.
T Consensus 109 p~~~d~vi~K~~~saF~~t~L~~~L~~~gi~~lii~G~~t~~CV~~Ta~da~~~Gy~-v~vv~Da~as~~~~~h~~aL~~ 187 (223)
T 3tg2_A 109 PESGDVQLTKWRYSAFKKSPLLDWLRETGRDQLIITGVYAHIGILSTALDAFMFDIQ-PFVIGDGVADFSLSDHEFSLRY 187 (223)
T ss_dssp CCTTSEEEECCSSSTTTTSSHHHHHHHHTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECSSHHHHHHHHHH
T ss_pred CCCCCEEEECCcccccccccHHHHHHhcCcCceEEeecccChHHHHHHHHHHHCCCE-EEEeCcccCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999999999 9999999999999999999999
Q ss_pred HHhcCcEeeeHHHHHHHhhc
Q 045208 156 MKNFGIATATLQEWSERVAD 175 (176)
Q Consensus 156 l~~~g~~v~~~~e~~~~l~~ 175 (176)
|...|+.|+|++|++.+|..
T Consensus 188 ~~~~~a~v~tte~~l~eL~~ 207 (223)
T 3tg2_A 188 ISGRTGAVKSTQQACLEIAA 207 (223)
T ss_dssp HHHHTCEEECHHHHHHHHC-
T ss_pred HHHcCCEEecHHHHHHHHHh
Confidence 99999999999999999864
No 11
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=100.00 E-value=1.3e-39 Score=248.03 Aligned_cols=167 Identities=23% Similarity=0.253 Sum_probs=149.4
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||++|+|+|.+++.+.++++|++|++++|. .|||||++.|.+++..+.. .+ ..|+.+|++|++|++++|+|.
T Consensus 44 ndF~~p~G~l~~~~~~~iv~~i~~Li~~ar~--~pVi~t~d~h~~~~~~f~~--~~---g~wp~h~~~gt~G~ei~~~L~ 116 (227)
T 3r2j_A 44 VDFLAPGGSLHVKGGEALLDGINAVSSQLPF--RYQVATQDWHPENHCSFVT--HG---GPWPPHCVQGSAGAQLHAGLH 116 (227)
T ss_dssp HHHHSTTCSSCCTTCGGGHHHHHHHHHHSCC--SEEEEEEECBCTTCTTBGG--GT---SSBCSCSBTTSGGGSBCTTSC
T ss_pred hHhhCCCCccCCCCHHHHHHHHHHHHHHcCC--CeEEEEEeeCCCCccchhh--hc---CcCcccccCCCchhHHhHhhc
Confidence 6899999999999999999999999999875 5999999988766543221 11 224567999999999999999
Q ss_pred CCCCCeeeecC------CCCcc-----CCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCC
Q 045208 81 IREGDYKLVKT------RFSAF-----FATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAA 144 (176)
Q Consensus 81 ~~~~d~v~~K~------~~saf-----~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~ 144 (176)
|.+++.+|.|. +||+| .+|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||+++
T Consensus 117 ~~~~d~vi~K~~~~~~~~~SaF~~~~~~~t~L~~~L~~~gi~~lvv~G~~T~~CV~~Ta~dA~~~Gy~-V~Vv~Da~as~ 195 (227)
T 3r2j_A 117 TQRINAVIRKGVTQQADSYSAFVEDNGVSTGLAGLLHSIGARRVFVCGVAYDFCVFFTAMDARKNGFS-VVLLEDLTAAV 195 (227)
T ss_dssp CTTCCEEEEESCSTTCCCSSSSBCTTSCBCSHHHHHHHHTCCEEEEEESCTTTHHHHHHHHHHHTTCE-EEEEEEEECCS
T ss_pred ccCCCEEEECCCcccccccchhccCCCCCCcHHHHHHHcCCCEEEEEEeccchHHHHHHHHHHHCCCE-EEEEhHhhCCC
Confidence 99999999999 99999 7999999999999999 99999999999999999999 99999999999
Q ss_pred CHHHHHHHHHHHHhcCcEeeeHHHHHHHhhc
Q 045208 145 TPDVHAANIVDMKNFGIATATLQEWSERVAD 175 (176)
Q Consensus 145 ~~~~h~~~l~~l~~~g~~v~~~~e~~~~l~~ 175 (176)
+++.|+.+|+.|...|++|+++++++.+|.+
T Consensus 196 ~~~~h~~aL~~m~~~g~~v~~s~~vl~~~~~ 226 (227)
T 3r2j_A 196 DDAAWSARTAELKDAGVVLLKSSALVAEGTQ 226 (227)
T ss_dssp CGGGHHHHHHHHHTTTCEEECGGGEECC---
T ss_pred CHHHHHHHHHHHHHcCCEEEEHHHHHHHhcc
Confidence 9999999999999999999999999988865
No 12
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=100.00 E-value=1.3e-37 Score=233.01 Aligned_cols=166 Identities=16% Similarity=0.191 Sum_probs=141.7
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||+++.+ ..++.+.++++|++|++++|+.|+|||||++.|.++..+.. .+.....|+++|..++++ +++|+|.
T Consensus 29 ~~f~~~~~--~~~~~~~~i~~i~~ll~~ar~~g~pVi~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~l~ 102 (199)
T 1j2r_A 29 EGILPFAG--GPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEAL---KQPVDAPSPAKVLPENWW-QHPAALG 102 (199)
T ss_dssp TTTGGGCC--BSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCTTCTTSC---CCCCSSCCCCCCCCTTTT-CCCGGGC
T ss_pred hhhhCCCc--ccccHHHHHHHHHHHHHHHHHcCCcEEEEEeeeCCCccccc---cCcccccCCCcCcCCChh-HhChhhC
Confidence 78987544 35678899999999999999999999999955655543311 111112244556555544 9999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHH
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVD 155 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~ 155 (176)
|.++|.+|.|++||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++++.|+.+|+.
T Consensus 103 ~~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~-v~vv~Da~as~~~~~h~~al~~ 181 (199)
T 1j2r_A 103 TTDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFN-LVIAEDACSAASAEQHNNSINH 181 (199)
T ss_dssp CCTTSEEEEESSSSSSTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEEBSSHHHHHHHHHH
T ss_pred CCCCCEEEeCCCcCCcCCCCHHHHHHHCCCCEEEEEeeeccHHHHHHHHHHHHCCCE-EEEehhhcCCCCHHHHHHHHHH
Confidence 98899999999999999999999999999999 99999999999999999999 9999999999999999999999
Q ss_pred HHhcCcEeeeHHHHHHHh
Q 045208 156 MKNFGIATATLQEWSERV 173 (176)
Q Consensus 156 l~~~g~~v~~~~e~~~~l 173 (176)
|...|+.|+++++++.+|
T Consensus 182 ~~~~~~~v~~t~~~l~~l 199 (199)
T 1j2r_A 182 IYPRIARVRSVEEILNAL 199 (199)
T ss_dssp THHHHSEEECHHHHHHHC
T ss_pred HHHheeEEeeHHHHHhhC
Confidence 999999999999999765
No 13
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=100.00 E-value=7.5e-38 Score=234.15 Aligned_cols=155 Identities=17% Similarity=0.155 Sum_probs=141.3
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||+++ .+...+.+.++++|++|++.||+.|+||||+++.+.+.+ +.+.+|++|++++|+|.
T Consensus 22 ~~f~~~--~~~~~~~~~~i~~i~~l~~~ar~~g~pVi~~~~~~~~~~----------------~~~~~g~~g~~i~~~l~ 83 (198)
T 3mcw_A 22 QAVDDP--SWGPRNHPQAEQACAGLLQAWRARGLPLIHIRHDSVEPN----------------STYRPGQPGHAFKPEVE 83 (198)
T ss_dssp GGGGSG--GGCCBSCTTHHHHHHHHHHHHHHHTCCEEEEEECCCCTT----------------CTTCTTSGGGSBCGGGC
T ss_pred hhhcCC--CccccChHHHHHHHHHHHHHHHHCCCEEEEEEEecCCCC----------------CCCCCcCCccccCcccC
Confidence 688853 345678899999999999999999999999998664322 23567999999999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCH---------
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATP--------- 146 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~--------- 146 (176)
|.++|.+|.|++||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++.
T Consensus 84 ~~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~-v~vv~Da~~s~~~~~~~g~~~~ 162 (198)
T 3mcw_A 84 PRPGETVIAKQTNSAFIGTGLEALLRANGWLELVVAGVSTSNSVEATVRMAGNLGFA-VCLAEDGCFTFDKTDWHGRRRS 162 (198)
T ss_dssp CCTTCEEEEESSSSTTTTSSHHHHHHHHTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECBCEECTTSCEEC
T ss_pred CCCCCEEEEcCccCccccchHHHHHHcCCCCeEEEEEcCcChHHHHHHHHHHHCCCE-EEEeCcccccccccccccccCC
Confidence 99999999999999999999999999999999 99999999999999999999 9999999999876
Q ss_pred --HHHHHHHHHHHhcCcEeeeHHHHHHHhh
Q 045208 147 --DVHAANIVDMKNFGIATATLQEWSERVA 174 (176)
Q Consensus 147 --~~h~~~l~~l~~~g~~v~~~~e~~~~l~ 174 (176)
+.|+.+|..|...|++|+++++++.+|.
T Consensus 163 ~~~~h~~al~~l~~~~a~v~tt~~~l~~l~ 192 (198)
T 3mcw_A 163 ADEVHAMSLANLDGEYCRVCGSADILAALG 192 (198)
T ss_dssp HHHHHHHHHHHHBTTTBEEECHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhccEEEeeHHHHHHHHH
Confidence 8999999999999999999999999875
No 14
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=100.00 E-value=1.7e-37 Score=229.02 Aligned_cols=156 Identities=27% Similarity=0.395 Sum_probs=141.0
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||+ |+|.+.+++.+.++++|++|++++|+.|+|||||++.|.+++.++.... ..|+.+|.+|++|++++ |.
T Consensus 13 ~~f~-~~g~l~~~~~~~~v~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~f~~~~-----~~~p~~~~~gt~g~~i~--l~ 84 (180)
T 1im5_A 13 RDFM-PGGALPVPEGDKIIPKVNEYIRKFKEKGALIVATRDWHPENHISFRERG-----GPWPRHCVQNTPGAEFV--VD 84 (180)
T ss_dssp GGGS-TTSSSCCTTGGGGHHHHHHHHHHHHHTTCEEEEEEECBCTTCTTBGGGT-----CSBCSCSBTTSGGGSBC--SC
T ss_pred CccC-CCCcccCCCHHHHHHHHHHHHHHHHHcCCEEEEEecccCCCCcChhhcC-----CCCchhhcCCCCCeEEE--Ee
Confidence 7899 7899999999999999999999999999999999999887765433211 13456799999999999 77
Q ss_pred CCCCCeeeecCC------CCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHH
Q 045208 81 IREGDYKLVKTR------FSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVH 149 (176)
Q Consensus 81 ~~~~d~v~~K~~------~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h 149 (176)
+.+++.+|.|++ ||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++++.|
T Consensus 85 ~~~~~~vi~K~~~~~~~~~saF~~t~L~~~L~~~gi~~lvi~G~~t~~CV~~Ta~da~~~Gy~-v~vv~Da~~~~~~~~h 163 (180)
T 1im5_A 85 LPEDAVIISKATEPDKEAYSGFEGTDLAKILRGNGVKRVYICGVATEYCVRATALDALKHGFE-VYLLRDAVKGIKPEDE 163 (180)
T ss_dssp CCTTCEEEEECCSTTCCCCSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECSCHHHH
T ss_pred cCCCcEEEECCCCCCCccccCccCCCHHHHHHhCCCCEEEEEEeecCHHHHHHHHHHHHCCCE-EEEehhhccCCCHHHH
Confidence 555699999999 99999999999999999999 99999999999999999999 9999999999999999
Q ss_pred HHHHHHHHhcCcEeee
Q 045208 150 AANIVDMKNFGIATAT 165 (176)
Q Consensus 150 ~~~l~~l~~~g~~v~~ 165 (176)
+.+|+.|...|+.|++
T Consensus 164 ~~al~~m~~~g~~v~~ 179 (180)
T 1im5_A 164 ERALEEMKSRGIKIVQ 179 (180)
T ss_dssp HHHHHHHHHTTCEEEC
T ss_pred HHHHHHHHHcCCEEEe
Confidence 9999999999999876
No 15
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=100.00 E-value=1.2e-37 Score=234.96 Aligned_cols=158 Identities=28% Similarity=0.313 Sum_probs=141.8
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||+++..++..++.+.++++|++|++++|+.|+||||+++.+.++. +.|.+|++|++++|+|.
T Consensus 16 ~~f~~~~~~~~~~~~~~~i~~i~~Ll~~ar~~g~pVi~t~~~~p~~~----------------~~~~~gs~g~~i~~~l~ 79 (211)
T 3oqp_A 16 NEYVTGDLPIEYPDVQSSLANIARAMDAARAAGVPVVIVQNFAPAGS----------------PLFARGSNGAELHPVVS 79 (211)
T ss_dssp GGGTTSSSCCCBSCHHHHHHHHHHHHHHHHHHTCCEEEEEECBCTTC----------------SSSBTTSGGGSBCHHHH
T ss_pred HhhcCCccccCCcCHHHHHHHHHHHHHHHHHCCCeEEEEEecCCCCC----------------ccccCCCCccccccccC
Confidence 68986222234578899999999999999999999999987543321 33788999999999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCC----------
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAAT---------- 145 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~---------- 145 (176)
|.++|.+|.|++||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++
T Consensus 80 ~~~~d~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~-V~vv~Da~as~~~~~~~g~~~a 158 (211)
T 3oqp_A 80 ERARDHYVEKSLPSAFTGTDLAGWLAARQIDTLTVTGYMTHNCDASTINHAVHSGLA-VEFLHDATGSVPYENSAGFASA 158 (211)
T ss_dssp TSCCSEEEEESSSCSSTTSSHHHHHHTTTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEEBCCEEETTEEECH
T ss_pred CCCCcEEEECCccCCCcccHHHHHHHhCCCCEEEEEeeccCHHHHHHHHHHHHCCCe-EEEechheeccccccccCCCCH
Confidence 99999999999999999999999999999999 99999999999999999999 999999999987
Q ss_pred HHHHHHHHHHHHhcCcEeeeHHHHHHHhhc
Q 045208 146 PDVHAANIVDMKNFGIATATLQEWSERVAD 175 (176)
Q Consensus 146 ~~~h~~~l~~l~~~g~~v~~~~e~~~~l~~ 175 (176)
++.|+.+|..|...++.|++++|++.+|..
T Consensus 159 ~~~h~~~l~~l~~~~a~V~tt~e~l~~l~~ 188 (211)
T 3oqp_A 159 EEIHRVFSVVLQSRFAAVASTDEWIAAVQG 188 (211)
T ss_dssp HHHHHHHHHHHHHHTCEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccEEEeEHHHHHHHHhc
Confidence 678999999999999999999999998864
No 16
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=100.00 E-value=1e-37 Score=233.15 Aligned_cols=150 Identities=24% Similarity=0.317 Sum_probs=140.2
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||++ |.+.+++.+.++++|++|++.+|+.|+||||+++.+.++. .+|..|++| +++|+|.
T Consensus 33 ~~f~~--g~l~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~----------------~~~~~g~~g-~~~~~l~ 93 (197)
T 4h17_A 33 KEYLS--GPLKLSGMDEAVANIARLLDAARKSGRPIIHVRHLGTVGG----------------RFDPQGPAG-QFIPGLE 93 (197)
T ss_dssp GGGGS--STTCCTTHHHHHHHHHHHHHHHHHTTCCEEEEEECCCTTS----------------TTCTTSGGG-SBCTTCC
T ss_pred chhhC--CccCCcCHHHHHHHHHHHHHHHHHCCCeEEEEEEecCCCC----------------ccccCCCCc-cCCHhhC
Confidence 68996 8888899999999999999999999999999998776532 237889999 9999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCC----------
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAAT---------- 145 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~---------- 145 (176)
|.++|.+|.|++||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++
T Consensus 94 ~~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~-V~vv~Da~as~~~~~~~~~~~a 172 (197)
T 4h17_A 94 PLEGEIVIEKRMPNAFKNTKLHETLQELGHLDLIVCGFMSHSSVSTTVRRAKDYGYR-CTLVEDASATRDLAFKDGVIPA 172 (197)
T ss_dssp CCTTCEEEEESSSSTTTTTCHHHHHHHHTCSEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECCCEEETTEEECH
T ss_pred CCCCCEEEeCCcCCCcccchHHHHHHhcCCCEEEEEeeCcCHHHHHHHHHHHHCCCE-EEEeCccccccCcccccCCCCH
Confidence 99999999999999999999999999999999 99999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHHhcCcEeeeHHHHH
Q 045208 146 PDVHAANIVDMKNFGIATATLQEWS 170 (176)
Q Consensus 146 ~~~h~~~l~~l~~~g~~v~~~~e~~ 170 (176)
++.|+.+|..|...+++|++++|++
T Consensus 173 ~~~h~~aL~~l~~~~a~V~tt~e~i 197 (197)
T 4h17_A 173 AQIHQCEMAVMADNFACVAPTASLI 197 (197)
T ss_dssp HHHHHHHHHHHHHHTCEEECGGGTC
T ss_pred HHHHHHHHHHHHhcceEEeEHHHcC
Confidence 8899999999999999999999874
No 17
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=100.00 E-value=2e-38 Score=235.13 Aligned_cols=160 Identities=27% Similarity=0.334 Sum_probs=141.7
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccC-CCCCChhhhhhccCCCCCCCCccCCCCCcccccCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHN-PLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGL 79 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l 79 (176)
|||+ |+|+|++++.++++++|++|++.+|+ +.|||||++.|. |.+. .+. ...+...|+.+|++|++|++++|+|
T Consensus 11 ~df~-~~g~l~~~~~~~vv~~i~~li~~~r~-~~~Vi~t~d~h~~p~~~-~~~--~~~~~~~wp~hc~~gt~g~~~~~~l 85 (186)
T 3gbc_A 11 NDFC-EGGSLAVTGGAALARAISDYLAEAAD-YHHVVATKDFHIDPGDH-FSG--TPDYSSSWPPHCVSGTPGADFHPSL 85 (186)
T ss_dssp GGGS-TTSTTCCTTHHHHHHHHTTSSSSCCC-CSEEEEEEECBSCCGGG-BCS--SCCSSSCBCCCSBTTSGGGSBCSSS
T ss_pred CcCC-CCCcccCCCHHHHHHHHHHHHHHhcc-CCEEEEEEEEcCCCCcc-ccc--CccccccCcccccCCCCcccCChhh
Confidence 7999 68999999999999999999999998 999999998875 3221 000 0012234567899999999999999
Q ss_pred CCCCCCeeeecCC----CCccC-----CCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCC
Q 045208 80 VIREGDYKLVKTR----FSAFF-----ATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAAT 145 (176)
Q Consensus 80 ~~~~~d~v~~K~~----~saf~-----~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~ 145 (176)
.|.++|.+|.|++ ||+|+ +|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++
T Consensus 86 ~~~~~d~vi~K~~~~~~ysaF~~~~~~~t~L~~~L~~~gi~~lvv~G~~t~~CV~~Ta~da~~~G~~-v~v~~Da~~~~~ 164 (186)
T 3gbc_A 86 DTSAIEAVFYKGAYTGAYSGFEGVDENGTPLLNWLRQRGVDEVDVVGIATDHCVRQTAEDAVRNGLA-TRVLVDLTAGVS 164 (186)
T ss_dssp CCTTCCEEEEECSSSCCCCGGGCBCSSSCBHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECSC
T ss_pred hccCCcEEEECCCCCccccccccCCCCCCcHHHHHHhcCCCEEEEEEecccHHHHHHHHHHHHCCCe-EEEEhhhcCCCC
Confidence 9999999999997 69999 899999999999999 99999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHHhcCcEeeeH
Q 045208 146 PDVHAANIVDMKNFGIATATL 166 (176)
Q Consensus 146 ~~~h~~~l~~l~~~g~~v~~~ 166 (176)
++.|+.+|+.|+..|+.++++
T Consensus 165 ~~~~~~al~~m~~~G~~i~~s 185 (186)
T 3gbc_A 165 ADTTVAALEEMRTASVELVCS 185 (186)
T ss_dssp HHHHHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHHHHHHcCCEEeec
Confidence 999999999999999999875
No 18
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=100.00 E-value=2.7e-38 Score=238.08 Aligned_cols=161 Identities=20% Similarity=0.164 Sum_probs=139.8
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||+.+.| .++.+.++++|++|++++|+.|+||||+++.|.++..+.+.|.. .|..+|..|++|++++++|.
T Consensus 41 ~~f~~~~~---~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~~~~~~~-----~~~~~~~~g~~g~~i~~~l~ 112 (207)
T 1nf9_A 41 RYFLRPLP---ESLRAGLVANAARLRRWCVEQGVQIAYTAQPGSMTEEQRGLLKD-----FWGPGMRASPADREVVEELA 112 (207)
T ss_dssp HHHHTTSC---HHHHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCCHHHHTTHHH-----HHTTCCCSSHHHHSBCGGGC
T ss_pred HHhcCCCC---cccHHHHHHHHHHHHHHHHHcCCeEEEEeecCCCChhhhhhhhh-----hcCCCCCCCCchhhhchhhC
Confidence 57886544 45678899999999999999999999999876543211111111 01234888999999999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHH
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVD 155 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~ 155 (176)
|.+++.+|.|++||+|++|+|.++|+++||++ ++||+||++|+++|+++||+ |+|++|||++++++.|+.+|+.
T Consensus 113 p~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~-V~vv~Da~as~~~~~h~~al~~ 191 (207)
T 1nf9_A 113 PGPDDWLLTKWRYSAFFHSDLLQRMRAAGRDQLVLCGVYAHVGVLISTVDAYSNDIQ-PFLVADAIADFSEAHHRMALEY 191 (207)
T ss_dssp CCTTSEEEECCSSSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECSSHHHHHHHHHH
T ss_pred CCCCCEEEecCCCCCcCCCcHHHHHHHcCCCEEEEEeeecChHHHHHHHHHHHCCCE-EEEeCcccCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999999999 9999999999999999999999
Q ss_pred HHhcCcEeeeHHHHH
Q 045208 156 MKNFGIATATLQEWS 170 (176)
Q Consensus 156 l~~~g~~v~~~~e~~ 170 (176)
|...|+.|+++++++
T Consensus 192 ~~~~~~~v~~t~~~l 206 (207)
T 1nf9_A 192 AASRCAMVVTTDEVL 206 (207)
T ss_dssp HHHHTCEEECHHHHH
T ss_pred HHHhCcEEccHHHHh
Confidence 999999999999987
No 19
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=100.00 E-value=1.6e-38 Score=240.65 Aligned_cols=164 Identities=22% Similarity=0.235 Sum_probs=143.7
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChh-------hhhhc------------cCCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVE-------LFRRH------------RYSPG 61 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~-------~~~~~------------~~~~~ 61 (176)
|||++|+|+|++++.+.++++|++|++.+|+.+.|||||+++|.+++..+. .|... ....-
T Consensus 11 ndF~~p~G~l~v~~~~~iv~~i~~ll~~~r~~~~~Vi~t~d~H~~~h~sf~~~~~g~~~f~~~~~~~p~~~~~~~~~~~~ 90 (216)
T 3v8e_A 11 NDFISPLGSLTVPKGEELINPISDLMQDADRDWHRIVVTRDWHPSRHISFAKNHKDKEPYSTYTYHSPRPGDDSTQEGIL 90 (216)
T ss_dssp HHHHSTTSTTCCTTGGGGHHHHHHHHHCGGGCEEEEEEEEECBCTTCTTBGGGSTTCCTTCEEEEECSSTTCCCEEEEEC
T ss_pred ccccCCCCcccCCCHHHHHHHHHHHHHHHhhcCCEEEEecccCCCcCcchHhcCCCCCCcceeecccccccccccccccc
Confidence 799999999999999999999999999999999999999999987753321 11000 00012
Q ss_pred CCCCccCCCCCcccccCCCC---CCCCeeeec------CCCCccC------CCChHHHHHhCCCCe-----eecChhhHH
Q 045208 62 KVGPAVKGSRGAELVDGLVI---REGDYKLVK------TRFSAFF------ATHLHSFLQGAGVDS-----VQTPNCIRQ 121 (176)
Q Consensus 62 ~~~~~~~g~~~~~~~~~l~~---~~~d~v~~K------~~~saf~------~t~l~~~L~~~~i~~-----~~t~~CV~~ 121 (176)
|+.+|++||+|++|+|+|.| .+++.+|.| .+||+|+ +|+|.++|+++||++ ++|++||.+
T Consensus 91 wp~hcv~gt~G~ei~~~l~~~~~~~~~~vi~K~~~~~~~~ySaF~~~~~~~~t~L~~~L~~~gi~~l~i~G~~t~~CV~~ 170 (216)
T 3v8e_A 91 WPVHCVKNTWGSQLVDQIMDQVVTKHIKIVDKGFLTDREYYSAFHDIWNFHKTDMNKYLEKHHTDEVYIVGVALEYXVKA 170 (216)
T ss_dssp BCSCCBTTSGGGSBCHHHHHHHHHHTCEEEEECCSTTSCCCSSSBCTTSCSBCSHHHHHHHTTCCEEEEEEECTTTHHHH
T ss_pred CchhhcCCCCccccCHhHHhhhccCccEEEECCccCCCccccccccCCcCCCchHHHHHHhCCCCEEEEEEeccccHHHH
Confidence 56689999999999999998 468999999 5789994 899999999999999 999999999
Q ss_pred HHHHHHhCCCCcEEEeccccCCCCHH--HHHHHHHHHHhcCcEeee
Q 045208 122 TAFDAIALDYQPVTVVVDATAAATPD--VHAANIVDMKNFGIATAT 165 (176)
Q Consensus 122 Ta~~a~~~g~~~v~vv~Da~~~~~~~--~h~~~l~~l~~~g~~v~~ 165 (176)
|+++|+++||+ |+|++|||++++++ .|+.+|+.|+..|+++++
T Consensus 171 Ta~~a~~~g~~-v~v~~Da~~~~~~~~~~~~~al~~m~~~Gv~i~~ 215 (216)
T 3v8e_A 171 TAISAAELGYK-TTVLLDYTRPISDDPEVINKVKEELKAHNINVVD 215 (216)
T ss_dssp HHHHHHHTTCE-EEEEEEEEECSSCCHHHHHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHCCCE-EEEeccccCCCCcccHHHHHHHHHHHHcCCEEeC
Confidence 99999999999 99999999999988 999999999999999875
No 20
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=100.00 E-value=4.6e-37 Score=235.44 Aligned_cols=167 Identities=20% Similarity=0.256 Sum_probs=144.4
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhh--ccCC---------CCCCCCccCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRR--HRYS---------PGKVGPAVKG 69 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~g 69 (176)
|||+ |+|.|.+++.+.++++|++|+++ ++|||||++.|.++..++..+.+ ..+. ..|+.+|++|
T Consensus 40 ndf~-~~g~l~~~~~~~vv~~i~~Li~~----~~pVi~t~~~h~~~~~~f~~~~~~~~~~~~~~~~~~~~~~wp~hcv~g 114 (235)
T 2wt9_A 40 NGFT-PGGNLAVADADTIIPTINQLAGC----FENVVLTQDWHPDNHISFAANHPGKQPFETIELDYGSQVLWPKHCIQG 114 (235)
T ss_dssp GGGS-TTSTTCCTTGGGGHHHHHHHHTT----CSCEEEEEECBCTTCTTBGGGSTTCCTTCEEEETTEEEECBCSCCBTT
T ss_pred cCcC-CCCccCCCCHHHHHHHHHHHHHc----CCEEEEEeccCCCcchhhHhcCCCCCcccccccccccccCCcchhcCC
Confidence 7999 78999999999999999999975 48999999988776543322110 0111 1256789999
Q ss_pred CCCcccccCCCCCCCCeeeecC------CCCccC------CCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCC
Q 045208 70 SRGAELVDGLVIREGDYKLVKT------RFSAFF------ATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQ 132 (176)
Q Consensus 70 ~~~~~~~~~l~~~~~d~v~~K~------~~saf~------~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~ 132 (176)
++|++|+|+|.|.++|.+|.|. +||+|+ +|+|.++|+++||++ ++|++||++||++|+++||+
T Consensus 115 t~g~~i~~~L~~~~~d~vi~K~~~~~~~~~SaF~~~~~~~~T~L~~~L~~~gi~~lvv~G~~T~~CV~~Ta~dA~~~Gy~ 194 (235)
T 2wt9_A 115 THDAEFHPDLNIPTAQLIIRKGFHAHIDSYSAFMEADHTTMTGLTGYLKERGIDTVYVVGIATDFCVAWTALDAVKQGFK 194 (235)
T ss_dssp SGGGSBCTTCCCTTCCEEEEECCSTTCCCSSSSBCTTSCCBCSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCE
T ss_pred CchhHhChhhcccCCCEEEECCCCCCCccccccccCCccCCCcHHHHHHHCCCCEEEEEEeCccHHHHHHHHHHHhCCCE
Confidence 9999999999999999999997 699998 899999999999999 99999999999999999999
Q ss_pred cEEEeccccCCCC-HHHHHHHHHHHHhcCcEeeeHHHHHHHh
Q 045208 133 PVTVVVDATAAAT-PDVHAANIVDMKNFGIATATLQEWSERV 173 (176)
Q Consensus 133 ~v~vv~Da~~~~~-~~~h~~~l~~l~~~g~~v~~~~e~~~~l 173 (176)
|+|++|||++++ ++.|+.+|+.|...|+.|+++++++.+|
T Consensus 195 -V~Vv~Da~as~~~~~~~~~aL~~m~~~g~~v~tt~~vl~el 235 (235)
T 2wt9_A 195 -TLVIEDACKGIDLNGSLEQAWQTMQQQGVVRIQSTDLLNEC 235 (235)
T ss_dssp -EEEEEEEEECCCSTTHHHHHHHHHHHTTCEEECHHHHC---
T ss_pred -EEEechhccCCChhHHHHHHHHHHHHcCCEEEEHHHHHhcC
Confidence 999999999999 9999999999999999999999998765
No 21
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=100.00 E-value=3e-37 Score=231.05 Aligned_cols=168 Identities=18% Similarity=0.201 Sum_probs=145.1
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|+|++ +.+...+.+.++++|++|+++||++|+||||+++.|.+++.+...++... .+.+.|. ++.+++++|+|.
T Consensus 23 ~~f~~--~~~~~~~~~~~i~~i~~Li~~ar~~g~pVi~t~~~~~~d~~~~~~~~~~~---~~~~~~~-~~~~~~i~~~L~ 96 (199)
T 3txy_A 23 NGIVV--LPMVPQSGGDVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKTDV---PPSPPNL-DPEWSAFAPALG 96 (199)
T ss_dssp HHHHT--SCCBSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTSTTSCCCCCSS---CCCCCCC-CHHHHSBCGGGC
T ss_pred hhhhC--CCcCCCCHHHHHHHHHHHHHHHHHcCCcEEEEEeeecCCccccccccccC---CCcccCC-CCcHHhhChhhC
Confidence 57885 44556788999999999999999999999999998888765543322211 1122233 244689999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHH
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVD 155 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~ 155 (176)
|.++|.+|.|++||+|++|+|.++|+++||++ ++|++||++|+++|+++||+ |+|++|||++++++.|+.+|+.
T Consensus 97 ~~~~~~vi~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~t~~CV~~Ta~~a~~~G~~-v~v~~Da~~~~~~~~~~~al~~ 175 (199)
T 3txy_A 97 VQPLDVVVTKHQWGAFTGTDLDVQLRRRGITDIVLTGIATNIGVESTAREAYENNYN-VVVVSDAVSTWSTDAQTFALTQ 175 (199)
T ss_dssp CCTTSEEEEESSSSSSTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEEBSCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcCccccCcHHHHHHhCCCCEEEEEeeccCHHHHHHHHHHHHCCCE-EEEecHhhcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999999999 9999999999999999999999
Q ss_pred HHhcCcEeeeHHHHHHHhhc
Q 045208 156 MKNFGIATATLQEWSERVAD 175 (176)
Q Consensus 156 l~~~g~~v~~~~e~~~~l~~ 175 (176)
|...|+.|++++|++.+|..
T Consensus 176 ~~~~~~~v~tt~~~l~~l~~ 195 (199)
T 3txy_A 176 IFPKLGQVATAADVEAALET 195 (199)
T ss_dssp THHHHSEEECHHHHHHHHHC
T ss_pred HHhhceEEeeHHHHHHHHhc
Confidence 99999999999999999864
No 22
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=100.00 E-value=5.8e-36 Score=235.57 Aligned_cols=165 Identities=21% Similarity=0.196 Sum_probs=141.4
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||+++.+ ...++.+.++++|++|++.||+.|+|||||++.|.++..+.+.+... |..+|..|++|++++++|.
T Consensus 42 ~~f~~~~~-~~~~~~~~~i~~i~~L~~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~-----~~~~~~~g~~g~ei~~~l~ 115 (287)
T 2fq1_A 42 DYFVSFWG-ENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDM-----WGPGLTRSPEQQKVVDRLT 115 (287)
T ss_dssp HHHHTTSC-TTCHHHHHHHHHHHHHHHHHHHTTCCEEEEECCSCCCHHHHTTHHHH-----HTTGGGGCGGGCSBCGGGC
T ss_pred hHhhCccc-cccchHHHHHHHHHHHHHHHHHcCCeEEEEeecCCCChhhhhhhhhh-----ccCCCCCCCchhhcccccC
Confidence 57886533 23455688999999999999999999999998765432211111100 1234888999999999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHH
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVD 155 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~ 155 (176)
|.+++.+|.|++||+|++|+|.++|+++||++ +.||+||++||++|+++||+ |+|++|||++++++.|+.+|+.
T Consensus 116 p~~~d~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~-V~vv~Da~as~~~~~h~~al~~ 194 (287)
T 2fq1_A 116 PDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIK-PFMVADALADFSRDEHLMSLKY 194 (287)
T ss_dssp CCTTSEEEECCSSSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECSSHHHHHHHHHH
T ss_pred CCCCCEEEeCCccCCcCCCcHHHHHHHCCCCEEEEEEeCcchHHHHHHHHHHHCCCE-EEEechhccCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999999999 9999999999999999999999
Q ss_pred HHhcCcEeeeHHHHHHH
Q 045208 156 MKNFGIATATLQEWSER 172 (176)
Q Consensus 156 l~~~g~~v~~~~e~~~~ 172 (176)
|...|+.|+++++++.+
T Consensus 195 m~~~~~~v~~t~~v~~~ 211 (287)
T 2fq1_A 195 VAGRSGRVVMTEELLPA 211 (287)
T ss_dssp HHHHTCEEECHHHHSSS
T ss_pred HHHhCcEEeeHHHHHhC
Confidence 99999999999999875
No 23
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=100.00 E-value=8.3e-35 Score=212.26 Aligned_cols=143 Identities=20% Similarity=0.232 Sum_probs=130.6
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||++++ +.+++.+.++++|++|++.+|+.|+||||+++.. ++|.+|++|++++|+|.
T Consensus 14 ~~f~~~~--~~~~~~~~~~~~i~~li~~ar~~g~pVi~t~~~~--------------------~~~~~g~~g~~i~~~l~ 71 (167)
T 2a67_A 14 KGIESPT--QQLYRLPAVLDKVNQRIAVYRQHHAPIIFVQHEE--------------------TELPFGSDSWQLFEKLD 71 (167)
T ss_dssp TTSCCSS--CCCTTHHHHHHHHHHHHHHHHHTTCCEEEEEECB--------------------TTBCTTSTTTSBCTTSC
T ss_pred HHhcCCC--CcccCHHHHHHHHHHHHHHHHHCCCeEEEEEeCC--------------------CCccCCCCcceechhhC
Confidence 7899753 5577889999999999999999999999998631 23889999999999999
Q ss_pred CCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHH------HH
Q 045208 81 IREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPD------VH 149 (176)
Q Consensus 81 ~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~------~h 149 (176)
|.+++.+|.|++||+|++|+|.++|+++|+++ ++|++||++|+++|+++||+ |+|++|||++++++ .|
T Consensus 72 ~~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvv~G~~T~~CV~~Ta~da~~~Gy~-v~v~~Da~~s~~~~~~~a~~~~ 150 (167)
T 2a67_A 72 TQPTDFFIRKTHANAFYQTNLNDLLTEQAVQTLEIAGVQTEFCVDTTIRMAHGLGYT-CLMTPKTTSTLDNGHLTAAQII 150 (167)
T ss_dssp CCTTSEEEEESSSSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHHTCE-EEECTTCEECCCCSSSCHHHHH
T ss_pred CCCCCEEEECCCCCCCCCCcHHHHHHHCCCCEEEEEecccChHHHHHHHHHHHCCCE-EEEechhhcCCCcccCCHHHHH
Confidence 99999999999999999999999999999999 99999999999999999999 99999999999865 89
Q ss_pred HHHHHHHHhcCcEeeeH
Q 045208 150 AANIVDMKNFGIATATL 166 (176)
Q Consensus 150 ~~~l~~l~~~g~~v~~~ 166 (176)
+..+..|...+++|+++
T Consensus 151 ~~~l~~l~~~~a~v~~t 167 (167)
T 2a67_A 151 QHHEAIWAGRFLTFLSL 167 (167)
T ss_dssp HHHHHHHBTTTBEECC-
T ss_pred HHHHHHHhccceEEEeC
Confidence 99999998888999875
No 24
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=99.98 E-value=4.8e-32 Score=204.06 Aligned_cols=145 Identities=15% Similarity=0.118 Sum_probs=126.4
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||+++.+ ..+.+.++++|++|++.+|+.|+|||||++.+ + .++.+++|++.
T Consensus 22 ~~f~~~~~---~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~--~-----------------------~~~~~~~~~l~ 73 (208)
T 1yac_A 22 AGLLSLVR---DIEPDKFKNNVLALGDLAKYFNLPTILTTSAE--T-----------------------GPNGPLVPELK 73 (208)
T ss_dssp TTGGGGCC---SSCHHHHHHHHHHHHHHHHHTTCCEEEEEEST--T-----------------------TTTCCBCHHHH
T ss_pred hhhhcccc---cccHHHHHHHHHHHHHHHHHcCCcEEEEEecC--C-----------------------CCCCcccHHHH
Confidence 68886533 24567899999999999999999999998521 1 12345667776
Q ss_pred C-CCCCeeeecC-CCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHH
Q 045208 81 I-REGDYKLVKT-RFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANI 153 (176)
Q Consensus 81 ~-~~~d~v~~K~-~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l 153 (176)
+ .+++.+|.|+ +||+|++|+|.++|+++||++ ++||+||++|+++|+++||+ |+|++|||++++++.|+.+|
T Consensus 74 ~~~~~~~vi~K~~~~saF~~t~L~~~L~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~-V~vv~Da~as~~~~~h~~al 152 (208)
T 1yac_A 74 AQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFD-VFVVTDASGTFNEITRHSAW 152 (208)
T ss_dssp HHCTTSCEEEESSCSSGGGSHHHHHHHHHTTCSEEEEEEBSCCCCCHHHHHHHHHTTCE-EEEETTSCBCSSHHHHHHHH
T ss_pred hhCCCCeEEeeCCccCCCCCchHHHHHHhcCCCEEEEEEeccchhHHHHHHHHHHCCCE-EEEECcccCCCCHHHHHHHH
Confidence 5 3578889987 999999999999999999999 99999999999999999999 99999999999999999999
Q ss_pred HHHHhcCcEeeeHHHHHHHhh
Q 045208 154 VDMKNFGIATATLQEWSERVA 174 (176)
Q Consensus 154 ~~l~~~g~~v~~~~e~~~~l~ 174 (176)
+.|...|+.|+++++++.+|.
T Consensus 153 ~~m~~~g~~v~~t~~~l~~l~ 173 (208)
T 1yac_A 153 DRMSQAGAQLMTWFGVACELH 173 (208)
T ss_dssp HHHHHHTCEEECHHHHHHHHH
T ss_pred HHHHHcCCEEeeHHHHHHHHH
Confidence 999999999999999998874
No 25
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=99.97 E-value=1.8e-31 Score=199.64 Aligned_cols=140 Identities=21% Similarity=0.233 Sum_probs=124.9
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccCCC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDGLV 80 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 80 (176)
|||+++ +++.+.++++|++|++.+|+.|+||||+++.+ . + .|++++++.|++
T Consensus 24 ~~f~~~-----~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~--~---------~-----------~g~~~~el~~~l- 75 (199)
T 2b34_A 24 EKFASN-----IKYFPEIITTSRRLIDAARILSIPTIVTEQYP--K---------G-----------LGHTVPTLKEGL- 75 (199)
T ss_dssp GGGTTS-----STTHHHHHHHHHHHHHHHHHTTCCEEEEEESH--H---------H-----------HCCBCHHHHHHS-
T ss_pred hHHhhh-----cCCHHHHHHHHHHHHHHHHHCCCcEEEEEecC--C---------C-----------CCCChHHHHhhC-
Confidence 577752 47788999999999999999999999997531 1 0 266778898887
Q ss_pred CCCC-CeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHH
Q 045208 81 IREG-DYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIV 154 (176)
Q Consensus 81 ~~~~-d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~ 154 (176)
++ +.+|.|++||+|++| |.++|++ +++ +.||+||++|+++|+++||+ |+|++|||++++++.|+.+|+
T Consensus 76 --~~~~~vi~K~~~saF~~t-L~~~L~~--i~~lvi~G~~T~~CV~~Ta~da~~~Gy~-V~vv~Da~as~~~~~h~~al~ 149 (199)
T 2b34_A 76 --AENTPIFDKTKFSMCIPP-TEDTLKK--VQNVILVGIEAHVCVLQTTYDLLERGLN-VHVVVDAVSSRSHTDRHFAFK 149 (199)
T ss_dssp --CTTCCEEEESBSSSCCGG-GHHHHTT--CSEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECSSHHHHHHHHH
T ss_pred --CCCCeeeecCccCCcccH-HHHHHcC--CCEEEEEEEecCHHHHHHHHHHHHCCCE-EEEeCcccCCCCHHHHHHHHH
Confidence 35 889999999999999 9999999 998 99999999999999999999 999999999999999999999
Q ss_pred HHHhcCcEeeeHHHHHHHhh
Q 045208 155 DMKNFGIATATLQEWSERVA 174 (176)
Q Consensus 155 ~l~~~g~~v~~~~e~~~~l~ 174 (176)
.|...|+.|+++++++.+|.
T Consensus 150 ~m~~~g~~v~~t~~~l~~l~ 169 (199)
T 2b34_A 150 QMEQAGAILTTSEATILGLV 169 (199)
T ss_dssp HHHHHTCEEECHHHHHHHHH
T ss_pred HHHHCCCEEecHHHHHHHHH
Confidence 99999999999999998753
No 26
>1yzv_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.00A {Trypanosoma cruzi}
Probab=99.97 E-value=4.4e-31 Score=198.07 Aligned_cols=140 Identities=16% Similarity=0.198 Sum_probs=124.4
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCc---EEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCccccc
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGIL---VVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVD 77 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~---Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 77 (176)
|||+. .+++.+.++++|++|++.+|+.|+| ||||.+.+. . .| .++|
T Consensus 30 ~~f~~-----~~~~~~~vi~~i~~Ll~~ar~~g~p~~~Vi~t~~~~~-----------~-----------~G----~~~~ 78 (204)
T 1yzv_A 30 EKFMG-----RIANSANCVFVANRFAGLHTALGTAHSVYIVTEQYPK-----------G-----------LG----ATSA 78 (204)
T ss_dssp HHHHT-----TSTTHHHHHHHHHHHHHHHHHHCTTTEEEEEEEESHH-----------H-----------HC----SBCT
T ss_pred hHhhh-----ccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEecCC-----------c-----------CC----CChH
Confidence 46774 2577889999999999999999999 999954211 0 02 2678
Q ss_pred CCCCCCCCeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHH
Q 045208 78 GLVIREGDYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAAN 152 (176)
Q Consensus 78 ~l~~~~~d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~ 152 (176)
+|.|.++|.+|.|++||+|++ +|.++|+++|+++ ++|++||++|+++|+++||+ |+|++|||++++++.|+.+
T Consensus 79 eL~~~~~d~vi~K~~~SaF~~-~L~~~L~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~-V~vv~Da~as~~~~~h~~a 156 (204)
T 1yzv_A 79 DIRLPPDAHVFSKKRFAMLVP-QVMPLVDLPEVEQVVLWGFETHVCILQTAAALLDMKKK-VVIAVDGCGSQSQGDHCTA 156 (204)
T ss_dssp TSCCCTTCEEEEESSSSSCCT-TTHHHHSSTTEEEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEEEEEECSSHHHHHHH
T ss_pred HhcCCCCCEEEECCcCCCchh-HHHHHHHhCCCCEEEEEEeccCHHHHHHHHHHHHCCCE-EEEECCccCCCCHHHHHHH
Confidence 888888899999999999999 9999999999999 99999999999999999999 9999999999999999999
Q ss_pred HHHHH---hcCcEeeeHHHHHHHh
Q 045208 153 IVDMK---NFGIATATLQEWSERV 173 (176)
Q Consensus 153 l~~l~---~~g~~v~~~~e~~~~l 173 (176)
|+.|. ..|+.|+++++++.+|
T Consensus 157 L~~m~~~~~~g~~v~t~e~vl~~l 180 (204)
T 1yzv_A 157 IQLMQSWSGDGCYISTSESILMQL 180 (204)
T ss_dssp HHHHHTTGGGTEEEECHHHHHHHH
T ss_pred HHHHHHHhcCCeEEeCHHHHHHHH
Confidence 99999 8999999999987664
No 27
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=99.97 E-value=2e-30 Score=193.94 Aligned_cols=138 Identities=18% Similarity=0.195 Sum_probs=122.6
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCC--CcEEEEEcccCCCCCChhhhhhccCCCCCCCCccCCCCCcccccC
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRG--ILVVWVVREHNPLGRDVELFRRHRYSPGKVGPAVKGSRGAELVDG 78 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~--~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 78 (176)
|||+. .+++.+.++++|++|++.+|+.| +|||||++. +.+ .| +++|+
T Consensus 30 ~~f~~-----~~~~~~~vi~~i~~ll~~ar~~g~~~pVi~t~~~--~~~--------------------~G----~~~~e 78 (200)
T 1x9g_A 30 EAFSK-----RIENFANCVFVANRLARLHEVVPENTKYIVTEHY--PKG--------------------LG----RIVPE 78 (200)
T ss_dssp TTTTT-----TSTTHHHHHHHHHHHHHHHHHSTTSEEEEEEEES--CSS--------------------SC----CBCTT
T ss_pred HHHhh-----ccCCHHHHHHHHHHHHHHHHHhCCCceEEEEeec--CCc--------------------cC----ccCHH
Confidence 67774 35778999999999999999999 999999753 111 02 46777
Q ss_pred CCCCCC-CeeeecCCCCccCCCChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHH
Q 045208 79 LVIREG-DYKLVKTRFSAFFATHLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAAN 152 (176)
Q Consensus 79 l~~~~~-d~v~~K~~~saf~~t~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~ 152 (176)
|. .++ +.+|.|++||+|++ +|.++|+ ||++ ++|++||++|+++|+++||+ |+|++|||++++++.|+.+
T Consensus 79 L~-~~~~~~vi~K~~~SaF~~-~L~~~L~--gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~-V~Vv~Da~as~~~~~h~~a 153 (200)
T 1x9g_A 79 IT-LPKTAHLIEKTRFSCVVP-QVEELLE--DVDNAVVFGIEGHACILQTVADLLDMNKR-VFLPKDGLGSQKKTDFKAA 153 (200)
T ss_dssp SC-CCTTCEEEEESSSSSCCH-HHHHTTT--TCCEEEEEEECTTTHHHHHHHHHHHTTCE-EEEEGGGEECSSHHHHHHH
T ss_pred Hh-CCCCCeEEeCCCCCCchh-hHHHHhC--CCCEEEEEEEecCcHHHHHHHHHHhCCCE-EEEeCCCcCCCCHHHHHHH
Confidence 77 677 99999999999999 9999999 9999 99999999999999999999 9999999999999999999
Q ss_pred HHHHH--hcCcEeeeHHHHHHHhh
Q 045208 153 IVDMK--NFGIATATLQEWSERVA 174 (176)
Q Consensus 153 l~~l~--~~g~~v~~~~e~~~~l~ 174 (176)
|+.|. ..|+.|+++++++.+|.
T Consensus 154 L~~m~~~~~g~~v~tte~vl~~l~ 177 (200)
T 1x9g_A 154 IKLMSSWGPNCEITTSESILLQMT 177 (200)
T ss_dssp HHHHHTSCSSEEEECHHHHHHHHS
T ss_pred HHHHHhhCCCeEEecHHHHHHHHH
Confidence 99999 89999999999988753
No 28
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=70.41 E-value=13 Score=28.05 Aligned_cols=63 Identities=11% Similarity=0.178 Sum_probs=48.7
Q ss_pred HHHHHhCCCCe---------eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEeee
Q 045208 102 HSFLQGAGVDS---------VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATAT 165 (176)
Q Consensus 102 ~~~L~~~~i~~---------~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~~ 165 (176)
.+..++.||.. ..+...+..=...+.+.||+ ++=++|.+-+.+.+.....++..+..|..|.+
T Consensus 61 i~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~-~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~ 132 (251)
T 1qwg_A 61 INYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFE-AVEISDGSSDISLEERNNAIKRAKDNGFMVLT 132 (251)
T ss_dssp HHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCC-EEEECCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCC-EEEECCCcccCCHHHHHHHHHHHHHCCCEEee
Confidence 34445567766 22333566667788899999 99999999999999988899999988877765
No 29
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=51.00 E-value=32 Score=26.36 Aligned_cols=53 Identities=13% Similarity=-0.040 Sum_probs=36.2
Q ss_pred ChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEeee-HHHHHHHh
Q 045208 116 PNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATAT-LQEWSERV 173 (176)
Q Consensus 116 ~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~~-~~e~~~~l 173 (176)
...-+.||+.|.+.|-+ |..+...+.+...+. -..|.+.|+.+++ .+|++++|
T Consensus 227 ~SGsliTA~~Ale~gR~-VfavPG~i~~~~s~G----~n~LI~~GA~lv~~~~Dil~el 280 (288)
T 3uqz_A 227 RSGSLITCERAMEEGRD-VFAIPGSILDGLSDG----CHHLIQEGAKLVTSGQDVLAEF 280 (288)
T ss_dssp TCHHHHHHHHHHHTTCE-EEECCCCSSSSTTHH----HHHHHHTTCEECSSHHHHHHHC
T ss_pred CChHHHHHHHHHHcCCe-EEEECCCCCCccchH----HHHHHHCCCEEECCHHHHHHHh
Confidence 34667799999999999 998866554433222 1223345787765 78999886
No 30
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=50.29 E-value=18 Score=31.38 Aligned_cols=52 Identities=19% Similarity=0.107 Sum_probs=37.7
Q ss_pred eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEeee
Q 045208 113 VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATAT 165 (176)
Q Consensus 113 ~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~~ 165 (176)
+..+.=|......|.++|.+ |+|+-|.-+-++.+....-.+.|...|++|+-
T Consensus 380 ~~~ds~Iv~ALi~AA~rGv~-V~vLvel~arfdee~ni~wa~~Le~aGv~Vv~ 431 (705)
T 2o8r_A 380 VAENSSIISALEAAAQSGKK-VSVFVELKARFDEENNLRLSERMRRSGIRIVY 431 (705)
T ss_dssp CCSCCHHHHHHHHHHHTTCE-EEEEECCCSCC----CHHHHHHHHHHTCEEEE
T ss_pred EcCCHHHHHHHHHHHHCCCE-EEEEEeCCCCcchhhhHHHHHHHHHCCCEEEE
Confidence 55677788888999999999 99999955445554444455888889999863
No 31
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=46.71 E-value=13 Score=26.85 Aligned_cols=31 Identities=6% Similarity=0.092 Sum_probs=26.7
Q ss_pred chhHHHHHHHHHHHHCCCcEEEEEcccCCCC
Q 045208 17 VILPNVIRAVEIARQRGILVVWVVREHNPLG 47 (176)
Q Consensus 17 ~ii~~i~~li~~~r~~~~~Vi~~~~~~~~~~ 47 (176)
..+.+..++++.+|+.|.||+...+.|.+..
T Consensus 144 ~~~~~~~~il~l~k~~g~~ivisSDAh~~~~ 174 (212)
T 1v77_A 144 NLLRFMMKAWKLVEKYKVRRFLTSSAQEKWD 174 (212)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECCCSSGGG
T ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCCCChhh
Confidence 4578889999999999999999988887654
No 32
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=46.12 E-value=93 Score=23.44 Aligned_cols=62 Identities=10% Similarity=0.145 Sum_probs=41.4
Q ss_pred ChHHHHHhCCCCe---eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEee
Q 045208 100 HLHSFLQGAGVDS---VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATA 164 (176)
Q Consensus 100 ~l~~~L~~~~i~~---~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~ 164 (176)
++.+.+.+..+|- ......+...+..+.++|.+ ++|+ .+.+++.+..+..++..+..|.+++
T Consensus 55 sl~el~~~~~~D~viI~tP~~~~~~~~~ea~~~Gi~-~iVi--~t~G~~~~~~~~l~~~A~~~gv~li 119 (288)
T 2nu8_A 55 TVREAVAATGATASVIYVPAPFCKDSILEAIDAGIK-LIIT--ITEGIPTLDMLTVKVKLDEAGVRMI 119 (288)
T ss_dssp SHHHHHHHHCCCEEEECCCGGGHHHHHHHHHHTTCS-EEEE--CCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHhhcCCCCEEEEecCHHHHHHHHHHHHHCCCC-EEEE--ECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4667666556777 44556677888999999998 8665 3335665554555566666676665
No 33
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=45.93 E-value=47 Score=21.91 Aligned_cols=47 Identities=19% Similarity=0.172 Sum_probs=31.7
Q ss_pred ChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEee
Q 045208 116 PNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATA 164 (176)
Q Consensus 116 ~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~ 164 (176)
+--+......|.++|.+ |.|+.|....... .....++.|...|++|.
T Consensus 39 ~~~i~~aL~~a~~rGV~-Vril~~~~~~~~~-~~~~~~~~L~~~gv~v~ 85 (155)
T 1byr_A 39 APDIMKALVAAKKRGVD-VKIVIDERGNTGR-ASIAAMNYIANSGIPLR 85 (155)
T ss_dssp CHHHHHHHHHHHHTTCE-EEEEEESTTCCSH-HHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHHCCCE-EEEEEeCcccccc-ccHHHHHHHHHCCCeEE
Confidence 33455556778899999 9999998765432 23445666777777664
No 34
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=44.91 E-value=74 Score=24.20 Aligned_cols=63 Identities=13% Similarity=0.080 Sum_probs=46.7
Q ss_pred hHHH---HHhCCCCe---------eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEeee
Q 045208 101 LHSF---LQGAGVDS---------VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATAT 165 (176)
Q Consensus 101 l~~~---L~~~~i~~---------~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~~ 165 (176)
|.+. .++.||.. +.+...+..=...+.+.||+ ++=++|.+-+.+.+.....++..+.. ..|.+
T Consensus 82 l~ekI~l~~~~gV~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~-~IEISdGti~l~~~~~~~lI~~a~~~-f~Vl~ 156 (276)
T 1u83_A 82 LEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCE-YIEISNGTLPMTNKEKAAYIADFSDE-FLVLS 156 (276)
T ss_dssp HHHHHHHHHHTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCS-EEEECCSSSCCCHHHHHHHHHHHTTT-SEEEE
T ss_pred HHHHHHHHHHcCCeEeCCcHHHHHHHHcCcHHHHHHHHHHcCCC-EEEECCCcccCCHHHHHHHHHHHHhh-cEEee
Confidence 5544 44577776 33334666777788899999 99999999999999888888877665 34433
No 35
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=41.76 E-value=18 Score=27.71 Aligned_cols=37 Identities=14% Similarity=0.149 Sum_probs=27.7
Q ss_pred CccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 2 DFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 2 dF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
||..-+|++. ...-+++.++++.|.+.++|||+..+.
T Consensus 129 d~~~~gGs~g----~~~~~K~~r~ie~A~~~~lPlI~l~ds 165 (285)
T 2f9i_B 129 DSRFRMGSMG----SVIGEKICRIIDYCTENRLPFILFSAS 165 (285)
T ss_dssp CTTTGGGCCC----HHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccccccCcCC----HHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 3433345554 467788999999999999999888764
No 36
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=41.19 E-value=19 Score=30.52 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=30.1
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
|||.--+|++. +...+++.++++.|.+.+.|+|+..+.
T Consensus 113 ~D~tv~gGS~g----~~~~~Ki~Ra~e~A~~~~lPvI~l~dS 150 (588)
T 3gf3_A 113 SDNKKMAGAWV----PGQAENLIRCSDAAKMMHLPLIYLLNC 150 (588)
T ss_dssp ECTTSGGGCBC----TTHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ECCcccCCCCC----HHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 45555556654 667889999999999999999998764
No 37
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=40.22 E-value=23 Score=25.78 Aligned_cols=36 Identities=22% Similarity=0.348 Sum_probs=28.5
Q ss_pred ccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEE
Q 045208 3 FIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVV 40 (176)
Q Consensus 3 F~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~ 40 (176)
|++-+|.|.- ...+++...+.|+.++++|++|+++.
T Consensus 10 ~~DlDGTLl~--~~~~~~~~~~ai~~l~~~Gi~v~laT 45 (266)
T 3pdw_A 10 LIDLDGTMYN--GTEKIEEACEFVRTLKDRGVPYLFVT 45 (266)
T ss_dssp EEECSSSTTC--HHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEeCcCceEe--CCEeCccHHHHHHHHHHCCCeEEEEe
Confidence 3455788752 36788999999999999999988773
No 38
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=37.70 E-value=29 Score=29.44 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=30.2
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
|||.--+|++. +...+++.++++.|.+.+.|+|+..+.
T Consensus 112 ~D~t~~gGs~g----~~~~~Ki~r~~e~A~~~~lPvI~l~dS 149 (587)
T 1pix_A 112 SDNKKLAGAWV----PGQAECLLRASDTAKTLHVPLVYVLNC 149 (587)
T ss_dssp ECTTTTTTEEC----TTHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ECCccccCCCC----HHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 45555566664 677889999999999999999998764
No 39
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=37.05 E-value=20 Score=30.08 Aligned_cols=38 Identities=21% Similarity=0.320 Sum_probs=29.8
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
|||.--+|++. ....++|.++++.|.+.+.|+|+..+.
T Consensus 104 ~D~tv~gGS~g----~~~~~Ki~ra~e~A~~~~lP~I~l~dS 141 (530)
T 3iav_A 104 QDFTVFGGALG----EVYGQKIVKVMDFALKTGCPVVGINDS 141 (530)
T ss_dssp ECTTSGGGCBC----HHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ECCCcceEecc----HHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 45555456664 667889999999999999999998764
No 40
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=36.15 E-value=99 Score=20.88 Aligned_cols=18 Identities=11% Similarity=-0.062 Sum_probs=11.5
Q ss_pred HHHHHhCCCCcEEEecccc
Q 045208 123 AFDAIALDYQPVTVVVDAT 141 (176)
Q Consensus 123 a~~a~~~g~~~v~vv~Da~ 141 (176)
.....++|.+ ++.+.+..
T Consensus 98 ~~~l~~~gv~-l~~~~~~~ 115 (167)
T 3guv_A 98 LQIMQDYGVN-LICVEDGI 115 (167)
T ss_dssp HHHHHHTTCE-EEETTTTE
T ss_pred HHHHHHCCCE-EEEeeCCc
Confidence 3345566777 77777664
No 41
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=35.94 E-value=68 Score=20.63 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=26.7
Q ss_pred ccCCCCccccCCcc-----chhHHHHHHHHHHHHCCCcEEEEE
Q 045208 3 FIADDGLVKMDGGK-----VILPNVIRAVEIARQRGILVVWVV 40 (176)
Q Consensus 3 F~~~~g~l~~~~~~-----~ii~~i~~li~~~r~~~~~Vi~~~ 40 (176)
|++-+|.|.-.... .+.+...++++.+++.|++++...
T Consensus 5 ~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~Gi~~~iaT 47 (126)
T 1xpj_A 5 IVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVIST 47 (126)
T ss_dssp EECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhCCCeEEEEe
Confidence 34557887643322 355888899999999999977664
No 42
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=35.90 E-value=58 Score=26.01 Aligned_cols=53 Identities=21% Similarity=0.082 Sum_probs=35.7
Q ss_pred hhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEeee-HHHHHHHhh
Q 045208 117 NCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATAT-LQEWSERVA 174 (176)
Q Consensus 117 ~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~~-~~e~~~~l~ 174 (176)
..-+.||+.|.+.|-+ |..+...+.+.... .-..|.+.|+.+++ .+++++.|.
T Consensus 249 SGsliTA~~Ale~gR~-VfavPG~i~~~~s~----G~n~LI~~GA~lv~~~~Dil~~l~ 302 (382)
T 3maj_A 249 SGSLITARRAADQGRE-VFAVPGSPLDPRAA----GTNDLIKQGATLITSASDIVEAVA 302 (382)
T ss_dssp CTHHHHHHHHHHHTCC-EEECCCCTTCGGGH----HHHHHHHTTCEECSSHHHHHHHHT
T ss_pred CcHHHHHHHHHHhCCc-EEEEcCCCCCcccc----cHHHHHHCCCEEECCHHHHHHHhh
Confidence 3567899999999999 99987654432211 12233344787766 688888774
No 43
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=35.49 E-value=51 Score=20.69 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=25.5
Q ss_pred CCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEE
Q 045208 5 ADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVV 40 (176)
Q Consensus 5 ~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~ 40 (176)
+-+|.| .+...+.+.+.++++..++.|.+++.+.
T Consensus 8 D~DgtL--~~~~~~~~~~~~~l~~L~~~G~~~~i~S 41 (137)
T 2pr7_A 8 DYAGVL--DGTDEDQRRWRNLLAAAKKNGVGTVILS 41 (137)
T ss_dssp CSTTTT--SSCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ecccee--cCCCccCccHHHHHHHHHHCCCEEEEEe
Confidence 345666 3445578889999999999999976553
No 44
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=35.40 E-value=90 Score=22.26 Aligned_cols=48 Identities=19% Similarity=0.231 Sum_probs=34.5
Q ss_pred HHHHHhCCCCcEEEeccccCC--CCHHHHHHHHHHHHhcCcEeeeHHHHHHH
Q 045208 123 AFDAIALDYQPVTVVVDATAA--ATPDVHAANIVDMKNFGIATATLQEWSER 172 (176)
Q Consensus 123 a~~a~~~g~~~v~vv~Da~~~--~~~~~h~~~l~~l~~~g~~v~~~~e~~~~ 172 (176)
++.....| . |++..|.... ...+.-...|..|+..|.++++..|++..
T Consensus 142 v~~~~~~g-~-IiL~Hd~~~~~~~t~~al~~ii~~l~~~Gy~fvtl~ell~~ 191 (216)
T 2c71_A 142 VINGVRDG-T-IILLHDVQPEPHPTPEALDIIIPTLKSRGYEFVTLTELFTL 191 (216)
T ss_dssp HHHHCCTT-B-EEEEESCCSSSCCHHHHHHHHHHHHHHTTCEECCHHHHHHH
T ss_pred HHhcCCCC-c-EEEEECCCCChHHHHHHHHHHHHHHHHCCCEEEEhHHhhcC
Confidence 33333345 6 8888887532 23456677899999999999999999865
No 45
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=34.73 E-value=22 Score=29.90 Aligned_cols=38 Identities=16% Similarity=0.186 Sum_probs=30.0
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
|||.--+|++. +...++|.++++.|.+.+.|+|+..+.
T Consensus 115 ~D~t~~gGS~g----~~~~~Ki~ra~e~A~~~~lP~I~l~dS 152 (548)
T 2bzr_A 115 QDATVFGGSLG----EVYGEKIVKVQELAIKTGRPLIGINDG 152 (548)
T ss_dssp ECTTSGGGCCC----HHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred EcCccccCCCC----hhHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 35554456664 678889999999999999999999764
No 46
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=34.73 E-value=22 Score=29.94 Aligned_cols=38 Identities=21% Similarity=0.312 Sum_probs=29.3
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
|||.--+|++. ....+++.++++.|.+.+.|+|+..+.
T Consensus 128 ~D~tv~gGS~g----~~~~~Ki~ra~e~A~~~~lPvI~l~dS 165 (555)
T 3u9r_B 128 NDATVKGGTYY----PLTVKKHLRAQAIALENRLPCIYLVDS 165 (555)
T ss_dssp ECTTTGGGCBC----HHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ECCccccCCCC----HHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 35554455554 567788999999999999999998764
No 47
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=34.00 E-value=39 Score=26.03 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=28.2
Q ss_pred CccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 2 DFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 2 dF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
||.--+|++. ......+.++++.|.+.++|+|+..+.
T Consensus 126 d~~~~ggslg----~~~~~Ki~r~~e~A~~~~~PvI~l~~s 162 (304)
T 2f9y_B 126 EFAFMGGSMG----SVVGARFVRAVEQALEDNCPLICFSAS 162 (304)
T ss_dssp CTTSTTTCBC----THHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred cCccccCCCC----HHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 4544466665 456889999999999999999888764
No 48
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=33.40 E-value=38 Score=24.52 Aligned_cols=35 Identities=20% Similarity=0.380 Sum_probs=27.1
Q ss_pred cCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEE
Q 045208 4 IADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVV 40 (176)
Q Consensus 4 ~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~ 40 (176)
++-+|.|.- ...+++...+.|+.++++|++|+++.
T Consensus 13 ~DlDGTLl~--~~~~~~~~~~ai~~l~~~Gi~v~l~T 47 (268)
T 3qgm_A 13 IDIDGVIGK--SVTPIPEGVEGVKKLKELGKKIIFVS 47 (268)
T ss_dssp EECBTTTEE--TTEECHHHHHHHHHHHHTTCEEEEEE
T ss_pred EcCcCcEEC--CCEeCcCHHHHHHHHHHcCCeEEEEe
Confidence 445677653 34578899999999999999988774
No 49
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=33.16 E-value=25 Score=29.49 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=29.4
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
|||.--+|++. ....++|.++++.|.+.+.|+|+..+.
T Consensus 112 ~D~t~~gGS~g----~~~~~Ki~ra~e~A~~~~lPvI~l~dS 149 (531)
T 3n6r_B 112 QDFTVLGGSVS----ETHSKKICKIMDMAMQNGAPVIGINDS 149 (531)
T ss_dssp ECTTSGGGCBC----HHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ECCCccccccc----HHHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 35554456654 677889999999999999999998764
No 50
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=32.61 E-value=25 Score=29.35 Aligned_cols=38 Identities=26% Similarity=0.320 Sum_probs=29.6
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
|||.--+|++. +...++|.++++.|.+.+.|+|+..+.
T Consensus 98 ~D~t~~gGS~g----~~~~~Ki~ra~e~A~~~~~P~I~l~~S 135 (522)
T 1x0u_A 98 QDFTVLGGSLG----ETHANKIVRAYELALKVGAPVVGINDS 135 (522)
T ss_dssp ECTTTGGGCBC----HHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ecCceeCcccc----HHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 35544456654 677889999999999999999998763
No 51
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=32.16 E-value=41 Score=27.50 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=30.1
Q ss_pred Ccccc---CCccchhHHHHHHHHHHHHCCCcEEEEEccc
Q 045208 8 GLVKM---DGGKVILPNVIRAVEIARQRGILVVWVVREH 43 (176)
Q Consensus 8 g~l~~---~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~~ 43 (176)
|.|.. -|++.+-+.+..||++.++.|.+|||+.|.-
T Consensus 330 GRlTLI~RmGa~kv~~~LP~li~aV~~~G~~VvW~cDPM 368 (462)
T 3rzi_A 330 GRLTLVSRMGNHKVRDLLPPIVEKVQATGHQVIWQCDPM 368 (462)
T ss_dssp TSEEEEECCCTTTHHHHHHHHHHHHHHTSCCCEEEECCS
T ss_pred CeEEEEEccCCchhhhhHHHHHHHHHHCCCCeEEEeCCC
Confidence 55542 4778999999999999999999999998743
No 52
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=32.04 E-value=1.6e+02 Score=22.17 Aligned_cols=62 Identities=11% Similarity=0.172 Sum_probs=40.0
Q ss_pred ChHHHHHhCCCCe---eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEee
Q 045208 100 HLHSFLQGAGVDS---VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATA 164 (176)
Q Consensus 100 ~l~~~L~~~~i~~---~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~ 164 (176)
++.+...+..+|- +...--+...+..+.++|.+ .+|+ .+.+++.+..+...+..+..|.+++
T Consensus 61 sl~el~~~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~-~vVi--~t~G~~~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 61 TVKEAVKETDANASVIFVPAPFAKDAVFEAIDAGIE-LIVV--ITEHIPVHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp SHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHTTCS-EEEE--CCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHhhcCCCCEEEEccCHHHHHHHHHHHHHCCCC-EEEE--ECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4666666556776 44455667788889999998 7775 2445665554555555556676665
No 53
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=31.93 E-value=42 Score=23.72 Aligned_cols=48 Identities=15% Similarity=0.109 Sum_probs=33.2
Q ss_pred eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEee
Q 045208 113 VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATA 164 (176)
Q Consensus 113 ~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~ 164 (176)
..|+--+......|.+||.+ |-|+.|.-.... ....+..|...|+.|.
T Consensus 68 ~~~~~~i~~aL~~aa~rGV~-Vrii~D~~~~~~---~~~~~~~l~~~gi~v~ 115 (196)
T 4ggj_A 68 AFSSPQLGRAVQLLHQRGVR-VRVITDCDYMAL---NGSQIGLLRKAGIQVR 115 (196)
T ss_dssp CBCCHHHHHHHHHHHHTTCE-EEEEESSCCC------CCHHHHHHHTTCEEE
T ss_pred EeCCHHHHHHHHHHHHcCCc-EEEEEecccccc---cHHHHHHHHhcCCCcc
Confidence 56777888888999999999 999998632211 1223556777787764
No 54
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=31.86 E-value=25 Score=29.37 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=29.6
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
|||.--+|++. +...++|.++++.|.+.+.|+|+..+.
T Consensus 102 ~D~t~~gGS~g----~~~~~Ki~ra~e~A~~~~lP~I~l~~S 139 (523)
T 1on3_A 102 QDFTVMGGSAG----ETQSTKVVETMEQALLTGTPFLFFYDS 139 (523)
T ss_dssp ECTTTGGGCBC----HHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred EcCCccCCcCc----HHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 35544456664 677889999999999999999988764
No 55
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=31.40 E-value=25 Score=31.00 Aligned_cols=38 Identities=29% Similarity=0.244 Sum_probs=28.9
Q ss_pred CCccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 1 NDFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 1 ndF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
|||..-.|++. ..-...+.++.+.|++.++|+|+..+.
T Consensus 128 nD~t~~gGS~g----~~~~~K~~ra~elA~~~glP~I~l~ds 165 (793)
T 2x24_A 128 NDITFRIGSFG----PGEDLLYLRASELARAEGIPRVYLAAN 165 (793)
T ss_dssp ECSSGGGGCBC----HHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ECCcccCCCCC----HHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 45555455554 566788999999999999999999763
No 56
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=30.64 E-value=23 Score=30.63 Aligned_cols=51 Identities=20% Similarity=0.169 Sum_probs=38.5
Q ss_pred eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEee
Q 045208 113 VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATA 164 (176)
Q Consensus 113 ~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~ 164 (176)
+..+.-+......|..+|.+ |.|+.|..+.++........+.|...|++|.
T Consensus 375 ~~~d~~I~~AL~~AA~rGV~-VrVLvd~~a~~~~~~n~~~~~~L~~aGV~V~ 425 (687)
T 1xdp_A 375 VAKDSRIIDSMIHAAHNGKK-VTVVVELQARFDEEANIHWAKRLTEAGVHVI 425 (687)
T ss_dssp CCTTCHHHHHHHHHHHTTCE-EEEEECTTCSSTTTTTTTTTHHHHHHTCEEE
T ss_pred ecCcHHHHHHHHHHHhcCCE-EEEEECCCcccchhhHHHHHHHHHHCCCEEE
Confidence 43667788888899999999 9999999886554333345567777888874
No 57
>2gqb_A Conserved hypothetical protein; hypothetical protein conserved unknown protein, structural genomics, PSI; NMR {Rhodopseudomonas palustris} SCOP: a.282.1.1
Probab=30.42 E-value=12 Score=25.03 Aligned_cols=59 Identities=15% Similarity=0.175 Sum_probs=43.9
Q ss_pred CCCChHHHHHhCCCCe-eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEee
Q 045208 97 FATHLHSFLQGAGVDS-VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATA 164 (176)
Q Consensus 97 ~~t~l~~~L~~~~i~~-~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~ 164 (176)
|.|.+.+.|+-.|++. +. +--.-|.+.||. .- .+-.++.|-..|.+.|+.|...|..|-
T Consensus 66 WrtSIVDLmKlLglDsSl~------~RkeLA~eL~~~-~~--~~dSA~mNiwLHk~vm~kLa~NGGkvP 125 (130)
T 2gqb_A 66 WRTSIVDLMKALDIDSSLS------ARKELAKELGYS-GD--MNDSASMNIWLHKQVMSKLVANGGKLP 125 (130)
T ss_dssp TTTCHHHHHHHTCCCCSHH------HHHHHHHHHTCC-CS--SCHHHHHHHHHHHHHHHHHGGGSEECC
T ss_pred cHHHHHHHHHHhCCCccHH------HHHHHHHHhCCC-CC--CCccHHHHHHHHHHHHHHHHHhCCCCC
Confidence 6788999999999887 32 223456677887 33 356666777899999999999987763
No 58
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=30.15 E-value=32 Score=23.59 Aligned_cols=27 Identities=19% Similarity=0.343 Sum_probs=23.2
Q ss_pred CccchhHHHHHHHHHHHHCCCcEEEEE
Q 045208 14 GGKVILPNVIRAVEIARQRGILVVWVV 40 (176)
Q Consensus 14 ~~~~ii~~i~~li~~~r~~~~~Vi~~~ 40 (176)
..+.+..++.++++.+|+.+.+|+++.
T Consensus 95 ~~~~~~~~~~~~i~~~~~~~~~vil~~ 121 (204)
T 3p94_A 95 ALENVFGNLVSMAELAKANHIKVIFCS 121 (204)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 457889999999999999998888874
No 59
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=29.93 E-value=28 Score=29.09 Aligned_cols=37 Identities=19% Similarity=0.359 Sum_probs=28.3
Q ss_pred CccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 2 DFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 2 dF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
||.--+|++. +..-+++.++++.|.+.+.|+|+..+.
T Consensus 106 D~t~~gGS~g----~~~~~Ki~r~~e~A~~~~lPvI~l~dS 142 (527)
T 1vrg_A 106 DFTVMGGSLG----EMHAKKIVKLLDLALKMGIPVIGINDS 142 (527)
T ss_dssp CTTTGGGCBC----HHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred eccccCcccc----HHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 4443355554 577789999999999999999988764
No 60
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=29.20 E-value=60 Score=22.73 Aligned_cols=27 Identities=11% Similarity=0.081 Sum_probs=23.0
Q ss_pred CccchhHHHHHHHHHHHHCCCcEEEEE
Q 045208 14 GGKVILPNVIRAVEIARQRGILVVWVV 40 (176)
Q Consensus 14 ~~~~ii~~i~~li~~~r~~~~~Vi~~~ 40 (176)
..+.+.+++.++++..|+.+..||++.
T Consensus 94 ~~~~~~~~l~~~i~~~~~~~~~vil~~ 120 (240)
T 3mil_A 94 PLPEFIDNIRQMVSLMKSYHIRPIIIG 120 (240)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 456789999999999999998888873
No 61
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=28.96 E-value=89 Score=25.85 Aligned_cols=45 Identities=9% Similarity=-0.071 Sum_probs=28.5
Q ss_pred HHHHHHHHhCCCCcEEEeccccCCCCH----HHH-------HHHHHHHHhcCcEeeeH
Q 045208 120 RQTAFDAIALDYQPVTVVVDATAAATP----DVH-------AANIVDMKNFGIATATL 166 (176)
Q Consensus 120 ~~Ta~~a~~~g~~~v~vv~Da~~~~~~----~~h-------~~~l~~l~~~g~~v~~~ 166 (176)
.+|++-+...|++ |+++. ||+...- ..+ ...++.+...|..|+++
T Consensus 271 ~a~~~vL~~lGie-v~~~~-CCGap~~~~~~G~~~~a~~la~rNi~~~~~~g~dIVt~ 326 (514)
T 3kwl_A 271 KSAKLYLEKMGQK-TIDLP-FCYDGGYYGKIISTHDFLTASAYNLALAKANGVSLIFC 326 (514)
T ss_dssp HHHHHHHHHTTCE-EECCC-CCCCCTTTHHHHCHHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHCCCe-EEeCC-CCChHHhccccCCHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 3567777788999 99998 8886432 111 22334444567777774
No 62
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=28.69 E-value=1.2e+02 Score=22.42 Aligned_cols=43 Identities=9% Similarity=0.075 Sum_probs=28.8
Q ss_pred HHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEee
Q 045208 120 RQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATA 164 (176)
Q Consensus 120 ~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~ 164 (176)
+..||.+..+||+ |.|+.=.-. .....+...++.+...|+.+.
T Consensus 75 lv~AR~L~~~G~~-V~v~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 75 LVCARHLKLFGYN-PVVFYPKRS-ERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp HHHHHHHHHTTCC-EEEECCCCC-TTCHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHCCCe-EEEEEcCCC-CCCHHHHHHHHHHHHcCCcEE
Confidence 3568899999999 988632211 223556677778877776654
No 63
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=27.66 E-value=61 Score=21.95 Aligned_cols=26 Identities=0% Similarity=-0.083 Sum_probs=22.5
Q ss_pred ccchhHHHHHHHHHHHHCCCcEEEEE
Q 045208 15 GKVILPNVIRAVEIARQRGILVVWVV 40 (176)
Q Consensus 15 ~~~ii~~i~~li~~~r~~~~~Vi~~~ 40 (176)
.+.+..++.++++.+|+.+.+||++.
T Consensus 81 ~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 81 PQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 46789999999999999998888874
No 64
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=27.40 E-value=51 Score=23.88 Aligned_cols=35 Identities=31% Similarity=0.408 Sum_probs=26.4
Q ss_pred cCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEE
Q 045208 4 IADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVV 40 (176)
Q Consensus 4 ~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~ 40 (176)
++-+|.|.- .+..++...+.|+.++++|++|+++.
T Consensus 10 ~DlDGTLl~--~~~~i~~~~eal~~l~~~G~~vvl~T 44 (264)
T 3epr_A 10 IDLDGTIYK--GKSRIPAGERFIERLQEKGIPYMLVT 44 (264)
T ss_dssp ECCBTTTEE--TTEECHHHHHHHHHHHHHTCCEEEEE
T ss_pred EeCCCceEe--CCEECcCHHHHHHHHHHCCCeEEEEe
Confidence 445677643 23445899999999999999988874
No 65
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=26.55 E-value=50 Score=20.20 Aligned_cols=20 Identities=15% Similarity=0.207 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHCCCcEEEE
Q 045208 20 PNVIRAVEIARQRGILVVWV 39 (176)
Q Consensus 20 ~~i~~li~~~r~~~~~Vi~~ 39 (176)
.-..++++.|+++|+||+--
T Consensus 27 ~~A~~I~~~A~e~~VPi~e~ 46 (83)
T 3bzy_B 27 AKALQIIKLAELYDIPVIED 46 (83)
T ss_dssp HHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHcCCCEEeC
Confidence 34456677788999999854
No 66
>3h7i_A Ribonuclease H, RNAse H; BPT4 RNAse H, 5'-3' exonuclease, hydrolase, endonuclease; 1.50A {Enterobacteria phage T4} PDB: 2ihn_A 3h8w_A 3h8j_A 1tfr_A 3h8s_A
Probab=26.28 E-value=66 Score=24.89 Aligned_cols=38 Identities=3% Similarity=-0.117 Sum_probs=31.4
Q ss_pred ChHHHHHhCCCCe-----eecChhhHHHHHHHHhCCCCcEEEec
Q 045208 100 HLHSFLQGAGVDS-----VQTPNCIRQTAFDAIALDYQPVTVVV 138 (176)
Q Consensus 100 ~l~~~L~~~~i~~-----~~t~~CV~~Ta~~a~~~g~~~v~vv~ 138 (176)
-+.+.|+..||.. ...|=++-+-|..+...|++ |+|++
T Consensus 111 ~ike~l~a~gi~~l~~~G~EADDiIgTLA~~a~~~g~~-V~IvS 153 (305)
T 3h7i_A 111 VIDELKAYMPYIVMDIDKYEANDHIAVLVKKFSLEGHK-ILIIS 153 (305)
T ss_dssp HHHHHHHHSSSEEECCTTCCHHHHHHHHHHHHHHTTCC-EEEEC
T ss_pred HHHHHHHHCCCCEEccCCccHHHHHHHHHHHHHHCCCc-EEEEe
Confidence 3567788889887 77788888888999999999 99876
No 67
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=26.21 E-value=82 Score=22.65 Aligned_cols=37 Identities=19% Similarity=0.225 Sum_probs=29.1
Q ss_pred ccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEE
Q 045208 3 FIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWV 39 (176)
Q Consensus 3 F~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~ 39 (176)
|++-+|.|.-.....+-+...+.++.+++.|.+++..
T Consensus 16 ~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~ia 52 (268)
T 3r4c_A 16 LLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIA 52 (268)
T ss_dssp EECSBTTTBCTTTCSCCHHHHHHHHHHHHTTCEEEEE
T ss_pred EEeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEE
Confidence 4455788764355678899999999999999988776
No 68
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=25.73 E-value=1.2e+02 Score=22.29 Aligned_cols=49 Identities=8% Similarity=0.164 Sum_probs=41.2
Q ss_pred cCCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 90 KTRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 90 K~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
....++|.+.--...|++.|++. -.||--|-.-+..|.+.|+. +++.-+
T Consensus 62 ~~~~GAfTGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~-pI~CvG 122 (233)
T 2jgq_A 62 PRDCGAFTGEITSKHLEELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFK-IVYCIG 122 (233)
T ss_dssp SSSSBSCTTCCBHHHHHHTTCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCCCCccCccCHHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCE-EEEEcC
Confidence 44467999999999999999987 67888888899999999999 887543
No 69
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=25.08 E-value=89 Score=22.90 Aligned_cols=37 Identities=24% Similarity=0.367 Sum_probs=28.3
Q ss_pred ccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEE
Q 045208 3 FIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWV 39 (176)
Q Consensus 3 F~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~ 39 (176)
|++-+|.|.-.+...+.+...+.++.+++.|..++.+
T Consensus 25 ~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~v~ia 61 (283)
T 3dao_A 25 ATDIDGTLVKDGSLLIDPEYMSVIDRLIDKGIIFVVC 61 (283)
T ss_dssp EECCBTTTBSTTCSCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred EEeCcCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEE
Confidence 3455788764443378899999999999999987776
No 70
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=24.97 E-value=1.2e+02 Score=21.84 Aligned_cols=62 Identities=16% Similarity=0.151 Sum_probs=39.2
Q ss_pred HHHHHhCCCCe--eecChhhHHHHHHHHh--CCCCcEEEeccccCCCCH---HHHHHHHHHHHhcCcEeeeH
Q 045208 102 HSFLQGAGVDS--VQTPNCIRQTAFDAIA--LDYQPVTVVVDATAAATP---DVHAANIVDMKNFGIATATL 166 (176)
Q Consensus 102 ~~~L~~~~i~~--~~t~~CV~~Ta~~a~~--~g~~~v~vv~Da~~~~~~---~~h~~~l~~l~~~g~~v~~~ 166 (176)
.+..++.||++ +++.. -.||+-+++ .|.+ +++|+--.+...+ +.-+...+.|...|+.|++.
T Consensus 36 ~era~e~~Ik~iVVAS~s--G~TA~k~~e~~~~i~-lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~ 104 (201)
T 1vp8_A 36 VERAKELGIKHLVVASSY--GDTAMKALEMAEGLE-VVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQ 104 (201)
T ss_dssp HHHHHHHTCCEEEEECSS--SHHHHHHHHHCTTCE-EEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHcCCCEEEEEeCC--ChHHHHHHHHhcCCe-EEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEE
Confidence 44556779999 44433 344444433 4788 9999977765443 22355667788888888764
No 71
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=24.63 E-value=1.2e+02 Score=22.60 Aligned_cols=50 Identities=18% Similarity=0.102 Sum_probs=41.8
Q ss_pred cCCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEeccc
Q 045208 90 KTRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVDA 140 (176)
Q Consensus 90 K~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~Da 140 (176)
....++|.+.--...|++.|++. -.||-.|-.-+..|.+.|.. ++++-.=
T Consensus 71 ~~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~V~~Kv~~Al~~GL~-pIlCvGE 132 (254)
T 3m9y_A 71 FEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMT-PIICVGE 132 (254)
T ss_dssp SSSSBSCTTCCCHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred cccCCCccCcCCHHHHHHcCCCEEEECcccccCccCCCHHHHHHHHHHHHHCCCE-EEEEcCC
Confidence 33467999988999999999987 67888999999999999999 8875443
No 72
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=24.34 E-value=57 Score=20.46 Aligned_cols=20 Identities=20% Similarity=0.144 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHCCCcEEEE
Q 045208 20 PNVIRAVEIARQRGILVVWV 39 (176)
Q Consensus 20 ~~i~~li~~~r~~~~~Vi~~ 39 (176)
.-..++++.|+++|+||+--
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~ 46 (93)
T 2vt1_B 27 QCALAVRKYANEVGIPTVRD 46 (93)
T ss_dssp HHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEC
Confidence 34556777888999999854
No 73
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=24.04 E-value=44 Score=29.29 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=28.2
Q ss_pred CccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 2 DFIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 2 dF~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
||.--+|++. ....+++.++++.|.+.+.|+|+..+.
T Consensus 113 D~t~~gGS~G----~~~~eKi~Ra~e~A~~~~lPvI~l~dS 149 (758)
T 3k8x_A 113 DITFKIGSFG----PQEDEFFNKVTEYARKRGIPRIYLAAN 149 (758)
T ss_dssp CTTSGGGCBC----HHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCccccccCc----HHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 4444455553 567889999999999999999998654
No 74
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=23.96 E-value=55 Score=22.08 Aligned_cols=37 Identities=11% Similarity=0.109 Sum_probs=26.4
Q ss_pred ccCCCCccccCCc---cchhHHHHHHHHHHHHCCCcEEEE
Q 045208 3 FIADDGLVKMDGG---KVILPNVIRAVEIARQRGILVVWV 39 (176)
Q Consensus 3 F~~~~g~l~~~~~---~~ii~~i~~li~~~r~~~~~Vi~~ 39 (176)
|++-+|.|...+. ....+.+.+.|+.+++.|..|+.+
T Consensus 7 ~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~G~~iii~ 46 (142)
T 2obb_A 7 AVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILW 46 (142)
T ss_dssp EECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEEC
T ss_pred EEECcCCCCCCCCccccccCHHHHHHHHHHHHCCCEEEEE
Confidence 4566788865432 234577889999999999987766
No 75
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=23.96 E-value=1e+02 Score=21.24 Aligned_cols=46 Identities=28% Similarity=0.263 Sum_probs=34.7
Q ss_pred CChHHHHHhCCCCe----eecCh--hhHHHHHHHHhC-CCCcEEEeccccCCCC
Q 045208 99 THLHSFLQGAGVDS----VQTPN--CIRQTAFDAIAL-DYQPVTVVVDATAAAT 145 (176)
Q Consensus 99 t~l~~~L~~~~i~~----~~t~~--CV~~Ta~~a~~~-g~~~v~vv~Da~~~~~ 145 (176)
.-|.++|++.|++. +..|- -+......+.++ +++ ++|.+-+++.-.
T Consensus 31 ~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~D-lVittGG~g~~~ 83 (172)
T 1mkz_A 31 HYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQ-VVLITGGTGLTE 83 (172)
T ss_dssp HHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCC-EEEEESCCSSST
T ss_pred HHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCC-EEEeCCCCCCCC
Confidence 44899999999876 44443 455677788887 799 999999887654
No 76
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=23.85 E-value=1.2e+02 Score=20.81 Aligned_cols=50 Identities=22% Similarity=0.242 Sum_probs=35.2
Q ss_pred CCChHHHHHhCCCCe----eecC-hhhHHHHHHHHhCCCCcEEEeccccCCCCHHH
Q 045208 98 ATHLHSFLQGAGVDS----VQTP-NCIRQTAFDAIALDYQPVTVVVDATAAATPDV 148 (176)
Q Consensus 98 ~t~l~~~L~~~~i~~----~~t~-~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~ 148 (176)
+.-|.++|++.|.+. +.-| .-+..+...+.+.+++ ++|.+-.++.-..+.
T Consensus 29 ~~~l~~~l~~~G~~v~~~~iv~Dd~~i~~al~~a~~~~~D-lVittGG~s~g~~D~ 83 (164)
T 3pzy_A 29 GPIITEWLAQQGFSSAQPEVVADGSPVGEALRKAIDDDVD-VILTSGGTGIAPTDS 83 (164)
T ss_dssp HHHHHHHHHHTTCEECCCEEECSSHHHHHHHHHHHHTTCS-EEEEESCCSSSTTCC
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCHHHHHHHHHHHHhCCCC-EEEECCCCCCCCCcc
Confidence 345889999999876 3333 3445566677777899 999999887655433
No 77
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=23.65 E-value=2.3e+02 Score=22.21 Aligned_cols=55 Identities=9% Similarity=0.096 Sum_probs=26.4
Q ss_pred hHHHHHhCCCCe-eecCh------hhHHHHH--HHHhCCCCcEEEeccccCC--CCHHHHHHHHHHH
Q 045208 101 LHSFLQGAGVDS-VQTPN------CIRQTAF--DAIALDYQPVTVVVDATAA--ATPDVHAANIVDM 156 (176)
Q Consensus 101 l~~~L~~~~i~~-~~t~~------CV~~Ta~--~a~~~g~~~v~vv~Da~~~--~~~~~h~~~l~~l 156 (176)
+.+.|+++|+.. +.|+. ....... ..+..-|+ .++..+-+.. .+++....+++.+
T Consensus 108 ~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd-~i~~~~~~~~~KP~p~~~~~~~~~l 173 (555)
T 3i28_A 108 AALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFD-FLIESCQVGMVKPEPQIYKFLLDTL 173 (555)
T ss_dssp HHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSS-EEEEHHHHTCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhhee-EEEeccccCCCCCCHHHHHHHHHHc
Confidence 444566666666 55554 2111111 13344466 6666554443 3344555555544
No 78
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=23.22 E-value=1.4e+02 Score=22.33 Aligned_cols=48 Identities=10% Similarity=0.096 Sum_probs=39.8
Q ss_pred CCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 91 TRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 91 ~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
...++|.+.--...|++.|++. -.||--|-.-+..|.+.|.. ++++-+
T Consensus 71 ~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~-pIlCvG 130 (255)
T 3qst_A 71 KPNGAFTGEVTVPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENGMK-IIYCCG 130 (255)
T ss_dssp SSSSSCTTCCCHHHHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCCCccCccCHHHHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCe-EEEEcC
Confidence 3467899988999999999886 67888888889999999999 777543
No 79
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=23.13 E-value=2.4e+02 Score=21.21 Aligned_cols=62 Identities=10% Similarity=0.115 Sum_probs=38.2
Q ss_pred ChHHHHHhCC-CCe---eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEee
Q 045208 100 HLHSFLQGAG-VDS---VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATA 164 (176)
Q Consensus 100 ~l~~~L~~~~-i~~---~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~ 164 (176)
++.+...+.+ +|. +...--+...+..+.++|.+ .+|+ .+.+++.+..+...+..+..|.+++
T Consensus 61 sl~el~~~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~-~vVi--~t~G~~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 61 SVKEALAEHPEINTSIVFVPAPFAPDAVYEAVDAGIR-LVVV--ITEGIPVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp SHHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCS-EEEE--CCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHhhcCCCCCEEEEecCHHHHHHHHHHHHHCCCC-EEEE--ECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 3556555444 776 44455667778888899987 6665 2445555554455555556676654
No 80
>2odk_A Hypothetical protein; prevent-HOST-death protein, structural genomics, APC7367, PS protein structure initiative; 1.40A {Nitrosomonas europaea} SCOP: d.306.1.1
Probab=23.10 E-value=49 Score=20.32 Aligned_cols=28 Identities=4% Similarity=-0.212 Sum_probs=21.8
Q ss_pred CccchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 14 GGKVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 14 ~~~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
....+-.+..++++.+.. +-||+-|++.
T Consensus 7 ~~~eak~~ls~l~~~v~~-~epv~ITr~G 34 (89)
T 2odk_A 7 PVQDAKARFSEFLDACIT-EGPQIVSRRG 34 (89)
T ss_dssp EHHHHHHTHHHHHHHHHH-TCCEEEEETT
T ss_pred eHHHHHHHHHHHHHHHhc-CCCEEEEECC
Confidence 345677888999999886 6799988754
No 81
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=23.04 E-value=1.4e+02 Score=22.22 Aligned_cols=49 Identities=14% Similarity=0.144 Sum_probs=40.7
Q ss_pred CCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEeccc
Q 045208 91 TRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVDA 140 (176)
Q Consensus 91 ~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~Da 140 (176)
...++|.+.--...|++.|++. -.||--|-.-+..|.+.|+. ++++-+=
T Consensus 69 ~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~-pI~CvGE 129 (248)
T 1r2r_A 69 VTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLG-VIACIGE 129 (248)
T ss_dssp SSSBSCTTCCCHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred CCCCCccCccCHHHHHHcCCCEEEECChhhhcccCCCHHHHHHHHHHHHHCCCE-EEEEcCC
Confidence 3457899988999999999987 67888888899999999999 8875443
No 82
>3hs2_A PHD protein, prevent HOST death protein; intrinsic disorder, DOC, toxin-anti antitoxin; 2.20A {Enterobacteria phage P1}
Probab=23.01 E-value=66 Score=17.79 Aligned_cols=26 Identities=15% Similarity=0.082 Sum_probs=20.2
Q ss_pred cchhHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 16 KVILPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 16 ~~ii~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
..+-.+..++++.+ +.|-||+-+++.
T Consensus 7 ~ear~~l~~ll~~v-~~~e~v~Itr~g 32 (58)
T 3hs2_A 7 RTARGNLSEVLNNV-EAGEEVEITRRG 32 (58)
T ss_dssp HHHHHSHHHHHHHH-HTTCCEEEECTT
T ss_pred HHHHHhHHHHHHHH-hCCCcEEEEECC
Confidence 45567888999988 578899999753
No 83
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=22.77 E-value=59 Score=22.49 Aligned_cols=19 Identities=21% Similarity=0.015 Sum_probs=16.8
Q ss_pred HHHHHHHHhCCCCcEEEecc
Q 045208 120 RQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 120 ~~Ta~~a~~~g~~~v~vv~D 139 (176)
+++|..+.++|++ |+|++-
T Consensus 15 L~aA~~La~~G~~-V~v~Ek 33 (336)
T 3kkj_A 15 LSAAQALTAAGHQ-VHLFDK 33 (336)
T ss_dssp HHHHHHHHHTTCC-EEEECS
T ss_pred HHHHHHHHHCCCC-EEEEEC
Confidence 5788999999999 999984
No 84
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=22.58 E-value=1.4e+02 Score=22.34 Aligned_cols=48 Identities=15% Similarity=0.196 Sum_probs=40.0
Q ss_pred CCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 91 TRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 91 ~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
...++|.+.--...|++.|++. -.||--|-.-+..|.+.|+. ++++-+
T Consensus 68 ~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~-pIvCvG 127 (259)
T 2i9e_A 68 VPKGAFTGEISPAMIKDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLK-VIACIG 127 (259)
T ss_dssp SSSBSCTTCCCHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCCCccCccCHHHHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCe-EEEEcC
Confidence 3457899988899999999987 57888899999999999998 777544
No 85
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=22.39 E-value=1.2e+02 Score=21.86 Aligned_cols=73 Identities=11% Similarity=0.094 Sum_probs=44.7
Q ss_pred CCChHHHHHhCCCCe----ee--------cChhh---HHHHHHHHhCCCCcEEEeccccCCCCHH-HHHHHHHHHHhcCc
Q 045208 98 ATHLHSFLQGAGVDS----VQ--------TPNCI---RQTAFDAIALDYQPVTVVVDATAAATPD-VHAANIVDMKNFGI 161 (176)
Q Consensus 98 ~t~l~~~L~~~~i~~----~~--------t~~CV---~~Ta~~a~~~g~~~v~vv~Da~~~~~~~-~h~~~l~~l~~~g~ 161 (176)
+....+.|++.|... +. .+..+ .........++-. |++..|.... ..+ .-...|..|+..|-
T Consensus 135 ~~~~~~~l~~~G~~~~~w~~d~~Dw~~~~~~~ii~~~~~~~~~~~~~~g~-IiL~Hd~~~~-t~~~~L~~ii~~l~~~Gy 212 (230)
T 2y8u_A 135 NELVLQVMRDLDYRVISASVDTKDYENQDADAIINTSFQLFLDQLDAGGN-IVLAHDIHYW-TVASLAERMLQEVNARGL 212 (230)
T ss_dssp CHHHHHHHHHTTCEEECCSEECCGGGCCSTTHHHHTHHHHHHHHHHTTCC-EEEECTTSHH-HHHTHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCEEEEecCCCCccCCCCHHHHHHHHHHHHHhccCCCCE-EEEEECCCcc-hHHHHHHHHHHHHHHCCC
Confidence 456788899999866 11 11121 1112223345556 8999886421 111 23567888889999
Q ss_pred EeeeHHHHHHH
Q 045208 162 ATATLQEWSER 172 (176)
Q Consensus 162 ~v~~~~e~~~~ 172 (176)
+++|..|++..
T Consensus 213 ~fvtl~ell~~ 223 (230)
T 2y8u_A 213 IATTVGDCLGD 223 (230)
T ss_dssp EEECHHHHTTC
T ss_pred EEEEhHHhhCc
Confidence 99999998753
No 86
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=22.31 E-value=1.5e+02 Score=22.11 Aligned_cols=49 Identities=8% Similarity=0.098 Sum_probs=39.9
Q ss_pred cCCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 90 KTRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 90 K~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
....++|.+.--...|++.|++. -.||--|-.-+..|.+.|.. +++.-+
T Consensus 68 ~~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~-pI~CvG 128 (248)
T 1o5x_A 68 KFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLK-AVVCFG 128 (248)
T ss_dssp SSCSBSCTTCCCHHHHHHTTCCEEEECCHHHHHHSCCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCCCCcCCcCCHHHHHHcCCCEEEeCChhhhcccCCCHHHHHHHHHHHHHCCCE-EEEEcC
Confidence 33457899988899999999886 67888888889999999998 777543
No 87
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=22.04 E-value=1.6e+02 Score=22.02 Aligned_cols=49 Identities=18% Similarity=0.115 Sum_probs=41.4
Q ss_pred cCCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 90 KTRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 90 K~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
....++|.+.--...|++.|++. -.||--|-.-+..|.+.|.. ++++-+
T Consensus 69 ~~~~GAfTGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~-pI~CvG 129 (257)
T 2yc6_A 69 LEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMT-VIFCVG 129 (257)
T ss_dssp SSCSSSCTTCCCHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCCcCccCccCHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCE-EEEEcC
Confidence 34467999988999999999987 67888888999999999999 887544
No 88
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=21.92 E-value=2.6e+02 Score=20.99 Aligned_cols=61 Identities=13% Similarity=0.139 Sum_probs=37.5
Q ss_pred hHHHHHhCCCCe---eecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEee
Q 045208 101 LHSFLQGAGVDS---VQTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATA 164 (176)
Q Consensus 101 l~~~L~~~~i~~---~~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~ 164 (176)
+.+..++..+|- +...-.+...+..+.++|.+ .+|+ .+.+++.+..+...+..+..|.+++
T Consensus 56 l~el~~~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~-~vVi--~t~G~~~~~~~~l~~~a~~~gi~vi 119 (288)
T 1oi7_A 56 VKEAVAHHEVDASIIFVPAPAAADAALEAAHAGIP-LIVL--ITEGIPTLDMVRAVEEIKALGSRLI 119 (288)
T ss_dssp HHHHHHHSCCSEEEECCCHHHHHHHHHHHHHTTCS-EEEE--CCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHhhcCCCCEEEEecCHHHHHHHHHHHHHCCCC-EEEE--ECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 556555556776 44455667778888888887 6665 3345555554455555555666654
No 89
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=21.82 E-value=1.4e+02 Score=22.58 Aligned_cols=48 Identities=15% Similarity=0.133 Sum_probs=40.3
Q ss_pred CCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 91 TRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 91 ~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
...++|.+.--...|++.|++. -.||-.|-.-+..|.+.|.. ++++-.
T Consensus 74 ~~~GAfTGEIS~~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~-pIlCvG 133 (267)
T 3ta6_A 74 HDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLT-PIVCIG 133 (267)
T ss_dssp SSSBSCTTCCCHHHHHHTTCCEEEESCHHHHHHTTCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCCCccCcccHHHHHHcCCCEEEEcchhhccccCCCHHHHHHHHHHHHHCCCe-EEEEeC
Confidence 3457999988999999999987 67888888889999999999 777543
No 90
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=21.53 E-value=1.6e+02 Score=21.96 Aligned_cols=48 Identities=13% Similarity=0.080 Sum_probs=39.9
Q ss_pred CCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 91 TRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 91 ~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
...++|.+.--...|++.|++. -.||--|-.-+..|.+.|.. +++.-+
T Consensus 68 ~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~-pI~CvG 127 (250)
T 1yya_A 68 HKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGIT-PILCVG 127 (250)
T ss_dssp SSSBSCTTCCCHHHHHHTTCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCCCccCcCCHHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCE-EEEEcC
Confidence 3457899988999999999987 67888888899999999999 777544
No 91
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=21.45 E-value=1.6e+02 Score=21.93 Aligned_cols=48 Identities=13% Similarity=0.111 Sum_probs=40.3
Q ss_pred CCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 91 TRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 91 ~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
...++|.+.--...|++.|++. -.||--|-.-+..|.+.|.. +++.-+
T Consensus 68 ~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~-pI~CvG 127 (247)
T 1ney_A 68 KASGAFTGENSVDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVG-VILCIG 127 (247)
T ss_dssp SSSBSCTTCCCHHHHHHTTCCEEEESCHHHHHTTCCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCCCccCccCHHHHHHcCCCEEEECChhhccccCCCHHHHHHHHHHHHHCCCE-EEEEcC
Confidence 3457899988999999999887 57888888899999999999 887544
No 92
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=21.25 E-value=1.6e+02 Score=22.32 Aligned_cols=48 Identities=15% Similarity=0.207 Sum_probs=40.5
Q ss_pred CCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 91 TRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 91 ~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
...++|.+.--...|++.|++. -.||--|-.-+..|.+.|.. ++++-.
T Consensus 92 ~~~GAfTGEIS~~mLkd~G~~~ViiGHSERR~~f~Etde~v~~Kv~~Al~~GL~-pIlCVG 151 (271)
T 3krs_A 92 TGNGAFTGEVSCEMLKDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLENGLK-IVLCIG 151 (271)
T ss_dssp SCSBSCTTCCCHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred ccCCCccccccHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCe-EEEEeC
Confidence 3467999988999999999987 67888888889999999999 777543
No 93
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=21.24 E-value=1.4e+02 Score=21.74 Aligned_cols=72 Identities=10% Similarity=0.113 Sum_probs=44.3
Q ss_pred CCChHHHHHhCCCCe----ee-cChh---------hHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEe
Q 045208 98 ATHLHSFLQGAGVDS----VQ-TPNC---------IRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIAT 163 (176)
Q Consensus 98 ~t~l~~~L~~~~i~~----~~-t~~C---------V~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v 163 (176)
+....+.|++.|... +. .|-. +...++.....| . |++..|.. ..+.+.-...|..|+..|-++
T Consensus 159 ~~~~~~~l~~~G~~~v~wsvd~~Dw~~~~~~~~~~~~~~v~~~~~~G-~-IiL~Hd~~-~~t~~aL~~ii~~l~~~Gy~f 235 (247)
T 2j13_A 159 SERTLALTKEMGYYNVFWSLAFLDWKVDEQRGWQYAHNNVMTMIHPG-S-ILLLHAIS-KDNAEALAKIIDDLREKGYHF 235 (247)
T ss_dssp CHHHHHHHHHTTCEEECCSEECCCC------------------CCTT-B-EEEECCCS-TTHHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHCCCEEEecCcccCcCCCCCCCCHHHHHHHHHHhcCCC-e-EEEEeCCc-HhHHHHHHHHHHHHHHCCCEE
Confidence 456778899999886 11 1111 111222222234 6 88888853 233556677889999999999
Q ss_pred eeHHHHHHH
Q 045208 164 ATLQEWSER 172 (176)
Q Consensus 164 ~~~~e~~~~ 172 (176)
+|..|++..
T Consensus 236 vtl~ell~~ 244 (247)
T 2j13_A 236 KSLDDLVKS 244 (247)
T ss_dssp ECHHHHHHT
T ss_pred EEhHHhhcc
Confidence 999998864
No 94
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=21.08 E-value=85 Score=23.35 Aligned_cols=32 Identities=6% Similarity=0.098 Sum_probs=27.2
Q ss_pred CCCHHHHHHHHHHHHhcCcEeeeHHHHHHHhh
Q 045208 143 AATPDVHAANIVDMKNFGIATATLQEWSERVA 174 (176)
Q Consensus 143 ~~~~~~h~~~l~~l~~~g~~v~~~~e~~~~l~ 174 (176)
+++++.-+..|+.|++.|-++++.+|+++.+.
T Consensus 27 ~v~~~~f~~ql~~L~~~gy~~vs~~~~~~~~~ 58 (268)
T 3vus_A 27 SVRTSALREQFAWLRENGYQPVSIAQIREAHR 58 (268)
T ss_dssp CEEHHHHHHHHHHHHHTTCEECCHHHHHHHHT
T ss_pred eeCHHHHHHHHHHHHHCCCEEecHHHHHHHHh
Confidence 45677778899999999999999999998764
No 95
>2l8b_A Protein TRAI, DNA helicase I; RECD, hydrolase; NMR {Escherichia coli}
Probab=21.06 E-value=1.3e+02 Score=21.45 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=30.6
Q ss_pred CCCCccccCCccch-hHHHHHHHHHHHHCCCcEEEEEcc
Q 045208 5 ADDGLVKMDGGKVI-LPNVIRAVEIARQRGILVVWVVRE 42 (176)
Q Consensus 5 ~~~g~l~~~~~~~i-i~~i~~li~~~r~~~~~Vi~~~~~ 42 (176)
.|++.|-+.+++.+ ......|++.|++++..||++.+.
T Consensus 120 tp~s~lIVD~AekLS~kE~~~Lld~A~~~naqvvll~~~ 158 (189)
T 2l8b_A 120 TPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG 158 (189)
T ss_dssp CCCCEEEEEESSSHHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEEechhhcCHHHHHHHHHHHHhcCCEEEEeCCc
Confidence 45666667777764 677899999999999999999876
No 96
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=21.01 E-value=59 Score=22.69 Aligned_cols=27 Identities=19% Similarity=0.265 Sum_probs=22.4
Q ss_pred CccchhHHHHHHHHHHHHCCCcEEEEE
Q 045208 14 GGKVILPNVIRAVEIARQRGILVVWVV 40 (176)
Q Consensus 14 ~~~~ii~~i~~li~~~r~~~~~Vi~~~ 40 (176)
..+.+..++.++++.+|+.+.+|+.+.
T Consensus 99 ~~~~~~~~l~~ii~~~~~~~~~iil~~ 125 (209)
T 4hf7_A 99 NEDYTFGNIASMAELAKANKIKVILTS 125 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred cHHHHHHHHHHhhHHHhccCceEEEEe
Confidence 346788999999999999999888763
No 97
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=20.81 E-value=2.5e+02 Score=21.15 Aligned_cols=54 Identities=22% Similarity=0.219 Sum_probs=35.6
Q ss_pred HhCCCCe-e----ecChhhHHHHHHHHhCCCCcEEEeccccCCCCHHHHHHHHHHHHhcCcEeee
Q 045208 106 QGAGVDS-V----QTPNCIRQTAFDAIALDYQPVTVVVDATAAATPDVHAANIVDMKNFGIATAT 165 (176)
Q Consensus 106 ~~~~i~~-~----~t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~~~~h~~~l~~l~~~g~~v~~ 165 (176)
+++|.++ + ++..--.++|..|..+|++ ++++..... .+ ..-+..|+.+|++|+-
T Consensus 66 ~~~G~~~vv~~G~ssGN~g~alA~~a~~~G~~-~~iv~p~~~-~~----~~k~~~~~~~GA~v~~ 124 (325)
T 1j0a_A 66 LSKGADVVITVGAVHSNHAFVTGLAAKKLGLD-AILVLRGKE-EL----KGNYLLDKIMGIETRV 124 (325)
T ss_dssp HHTTCSEEEEECCTTCHHHHHHHHHHHHTTCE-EEEEEESCC-CS----CHHHHHHHHTTCEEEE
T ss_pred HHcCCCEEEEcCCcchHHHHHHHHHHHHhCCc-EEEEECCCC-CC----CchHHHHHHCCCEEEE
Confidence 3567777 2 3345566788888999998 877765543 11 3345667788888874
No 98
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=20.81 E-value=2.8e+02 Score=21.12 Aligned_cols=61 Identities=20% Similarity=0.246 Sum_probs=38.9
Q ss_pred HHhCCCCe-ee----cChhhHHHHHHHHhCCCCcEEEeccccCCCC-HHH-HHHHHHHHHhcCcEeeeH
Q 045208 105 LQGAGVDS-VQ----TPNCIRQTAFDAIALDYQPVTVVVDATAAAT-PDV-HAANIVDMKNFGIATATL 166 (176)
Q Consensus 105 L~~~~i~~-~~----t~~CV~~Ta~~a~~~g~~~v~vv~Da~~~~~-~~~-h~~~l~~l~~~g~~v~~~ 166 (176)
.+++|.++ +. +..=-.++|..|..+|++ ++++.....+.. ... ...-+..++.+|++|+-.
T Consensus 76 a~~~G~~~vv~~s~tsGN~g~alA~aa~~~G~~-~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~ 143 (342)
T 4d9b_A 76 ALREGADTLITAGAIQSNHVRQTAAVAAKLGLH-CVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMC 143 (342)
T ss_dssp HHHTTCCEEEEEEETTCHHHHHHHHHHHHHTCE-EEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEEC
T ss_pred HHHcCCCEEEEcCCcccHHHHHHHHHHHHhCCc-EEEEEeCCCCCccccccccchHHHHHHCCCEEEEE
Confidence 34578777 22 244556778889999998 887776554432 222 123567778889988643
No 99
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=20.72 E-value=1.6e+02 Score=22.10 Aligned_cols=48 Identities=17% Similarity=0.144 Sum_probs=39.6
Q ss_pred CCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 91 TRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 91 ~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
...++|.+.--...|++.|++. -.||-.|-.-+..|.+.|.. +++.-+
T Consensus 70 ~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~-pI~CvG 129 (255)
T 1b9b_A 70 EDQGAFTGEISPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMT-PILCVG 129 (255)
T ss_dssp SSSBSCTTCCCHHHHHTTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCCCccCcCCHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCE-EEEEcC
Confidence 3457898888899999999886 67888888889999999999 777543
No 100
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=20.63 E-value=66 Score=23.17 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=26.2
Q ss_pred cCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEEE
Q 045208 4 IADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWVV 40 (176)
Q Consensus 4 ~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~~ 40 (176)
++-+|.|.-. ..+.+...+.++.+++.|++++++.
T Consensus 22 ~DlDGTLl~~--~~~~~~~~~~l~~l~~~G~~~~~aT 56 (271)
T 1vjr_A 22 LDMDGTFYLD--DSLLPGSLEFLETLKEKNKRFVFFT 56 (271)
T ss_dssp ECCBTTTEET--TEECTTHHHHHHHHHHTTCEEEEEE
T ss_pred EcCcCcEEeC--CEECcCHHHHHHHHHHcCCeEEEEE
Confidence 3446777533 5577888889999999999987764
No 101
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=20.56 E-value=1.4e+02 Score=22.37 Aligned_cols=48 Identities=10% Similarity=0.069 Sum_probs=40.3
Q ss_pred CCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 91 TRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 91 ~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
...++|.+.--...|++.|++. -.||-.|-.-+..|.+.|.. ++++-+
T Consensus 69 ~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~-pI~CvG 128 (255)
T 1tre_A 69 NLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLT-PVLCIG 128 (255)
T ss_dssp CSSBSCTTCCCHHHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCCCcCCcCCHHHHHHcCCCEEEECccccccccCCCHHHHHHHHHHHHHCCCE-EEEEcC
Confidence 3457899988999999999886 67888888889999999999 877544
No 102
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=20.52 E-value=1.7e+02 Score=21.78 Aligned_cols=48 Identities=13% Similarity=0.106 Sum_probs=40.0
Q ss_pred CCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 91 TRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 91 ~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
...++|.+.--...|++.|++. -.||-.|-.=+..|.+.|.. ++++-+
T Consensus 69 ~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~-pI~CvG 128 (249)
T 3th6_A 69 VEQGAFTGEISPGMIKDCGGQWVILGHSERRHVFKEDDVLIGEKIKHALESGLN-VIACIG 128 (249)
T ss_dssp SSSBSCTTCCCHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred ccCCCcccccCHHHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCE-EEEEcC
Confidence 3467899988999999999987 57888888888999999999 777554
No 103
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=20.40 E-value=1.6e+02 Score=22.31 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=40.8
Q ss_pred CCCCccCCCChHHHHHhCCCCe------------eecChhhHHHHHHHHhCCCCcEEEecc
Q 045208 91 TRFSAFFATHLHSFLQGAGVDS------------VQTPNCIRQTAFDAIALDYQPVTVVVD 139 (176)
Q Consensus 91 ~~~saf~~t~l~~~L~~~~i~~------------~~t~~CV~~Ta~~a~~~g~~~v~vv~D 139 (176)
...++|.+.--...|++.|++. -.||--|-.-+..|.+.|+. ++++-.
T Consensus 94 ~~~GAfTGEISa~MLkd~G~~~VIiGHSERR~~fgEtde~V~~K~~~Al~~GL~-pIlCVG 153 (272)
T 4g1k_A 94 HEQGAYTGEVAAGMVAEFGAAYAIVGHSERRAYHGESNETVAAKARRALAAGLT-PIVCVG 153 (272)
T ss_dssp SSSBSCTTCCCHHHHHTTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCE-EEEEEC
T ss_pred CCCCCCcCcCCHHHHHHcCCCEEEECchhcccccCCCHHHHHHHHHHHHHCCCe-EEEEeC
Confidence 3457899988999999999987 67888899999999999999 887544
No 104
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=20.35 E-value=55 Score=23.68 Aligned_cols=35 Identities=31% Similarity=0.223 Sum_probs=28.1
Q ss_pred ccCCCCccccCCccchhHHHHHHHHHHHHCCCcEEEE
Q 045208 3 FIADDGLVKMDGGKVILPNVIRAVEIARQRGILVVWV 39 (176)
Q Consensus 3 F~~~~g~l~~~~~~~ii~~i~~li~~~r~~~~~Vi~~ 39 (176)
|++-+|.|.-.. .+.+...+.++.+++.|++++..
T Consensus 4 ~~DlDGTLl~~~--~i~~~~~~al~~l~~~Gi~v~ia 38 (259)
T 3zx4_A 4 FTDLDGTLLDER--GELGPAREALERLRALGVPVVPV 38 (259)
T ss_dssp EECCCCCCSCSS--SSCSTTHHHHHHHHHTTCCEEEB
T ss_pred EEeCCCCCcCCC--cCCHHHHHHHHHHHHCCCeEEEE
Confidence 456689986555 78888899999999999998776
No 105
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=20.19 E-value=62 Score=20.45 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHCCCcEEEE
Q 045208 20 PNVIRAVEIARQRGILVVWV 39 (176)
Q Consensus 20 ~~i~~li~~~r~~~~~Vi~~ 39 (176)
.-..++++.|+++|+||+--
T Consensus 42 ~~A~~I~~~A~e~gVPi~e~ 61 (97)
T 3t7y_A 42 LRAKRIIAEAEKYGVPIMRN 61 (97)
T ss_dssp HHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHcCCeEEEC
Confidence 34566777888999999854
Done!