Query 045213
Match_columns 281
No_of_seqs 215 out of 1385
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 10:57:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045213.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045213hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 3.3E-50 7.1E-55 352.9 29.7 251 26-279 63-334 (365)
2 PTZ00224 protein phosphatase 2 100.0 5.3E-47 1.2E-51 333.6 28.9 247 20-279 14-275 (381)
3 KOG0697 Protein phosphatase 1B 100.0 7.3E-47 1.6E-51 305.9 22.7 254 22-278 16-294 (379)
4 COG0631 PTC1 Serine/threonine 100.0 3E-47 6.4E-52 322.5 21.3 242 25-278 5-255 (262)
5 PF00481 PP2C: Protein phospha 100.0 5E-46 1.1E-50 315.7 15.7 237 29-267 1-254 (254)
6 KOG0698 Serine/threonine prote 100.0 1.8E-43 4E-48 308.9 28.3 248 30-278 42-307 (330)
7 cd00143 PP2Cc Serine/threonine 100.0 4.4E-42 9.6E-47 291.2 28.5 243 28-274 1-254 (254)
8 smart00332 PP2Cc Serine/threon 100.0 4.9E-41 1.1E-45 285.2 27.4 242 26-272 4-255 (255)
9 PRK14559 putative protein seri 100.0 3.2E-41 6.9E-46 312.4 24.5 242 26-277 373-637 (645)
10 KOG0699 Serine/threonine prote 100.0 2.4E-36 5.2E-41 253.1 17.7 156 120-277 330-505 (542)
11 KOG0700 Protein phosphatase 2C 100.0 1.7E-32 3.7E-37 234.9 18.5 218 43-262 86-378 (390)
12 KOG1379 Serine/threonine prote 100.0 2.3E-27 5.1E-32 197.0 20.4 203 41-274 90-330 (330)
13 KOG1323 Serine/threonine phosp 99.9 1.4E-26 3.1E-31 192.6 18.5 221 55-277 141-489 (493)
14 KOG0618 Serine/threonine phosp 99.9 3.1E-23 6.7E-28 193.2 15.2 244 28-278 522-775 (1081)
15 PF13672 PP2C_2: Protein phosp 99.9 3.1E-22 6.8E-27 165.3 15.3 178 33-243 3-193 (212)
16 smart00331 PP2C_SIG Sigma fact 99.8 5.4E-19 1.2E-23 143.9 19.9 183 29-259 5-192 (193)
17 TIGR02865 spore_II_E stage II 99.8 7.3E-17 1.6E-21 154.9 21.0 190 37-274 562-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.7 7.4E-15 1.6E-19 119.3 18.2 175 57-275 3-193 (193)
19 COG2208 RsbU Serine phosphatas 98.7 1.5E-06 3.2E-11 77.8 19.1 187 41-275 161-366 (367)
20 PRK10693 response regulator of 85.4 6.9 0.00015 34.0 8.9 93 56-152 161-259 (303)
21 PF09436 DUF2016: Domain of un 59.6 6 0.00013 26.3 1.4 20 217-236 26-45 (72)
22 COG2168 DsrH Uncharacterized c 56.5 8.3 0.00018 27.2 1.7 52 214-268 21-72 (96)
23 COG3700 AphA Acid phosphatase 36.5 73 0.0016 25.5 4.4 47 216-262 69-130 (237)
24 cd08325 CARD_CASP1-like Caspas 26.1 1.6E+02 0.0034 20.1 4.2 33 230-262 29-61 (83)
25 PF04077 DsrH: DsrH like prote 25.9 15 0.00032 25.5 -0.9 28 215-242 16-43 (88)
26 cd00534 DHNA_DHNTPE Dihydroneo 25.6 2.4E+02 0.0052 20.4 5.5 54 223-278 42-101 (118)
27 PRK03982 heat shock protein Ht 24.8 78 0.0017 27.3 3.1 29 215-243 103-131 (288)
28 PRK02391 heat shock protein Ht 24.4 66 0.0014 27.9 2.6 28 216-243 112-139 (296)
29 PF01436 NHL: NHL repeat; Int 23.8 1.2E+02 0.0026 15.6 3.7 21 127-147 8-28 (28)
30 PRK05457 heat shock protein Ht 23.2 87 0.0019 27.0 3.1 36 208-243 105-140 (284)
31 PF06972 DUF1296: Protein of u 22.9 1.4E+02 0.003 19.1 3.1 25 232-256 19-44 (60)
32 COG1539 FolB Dihydroneopterin 22.9 3.2E+02 0.0069 20.2 6.0 55 223-279 43-103 (121)
33 COG3315 O-Methyltransferase in 20.2 1.8E+02 0.0039 25.3 4.4 90 141-243 104-194 (297)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=3.3e-50 Score=352.88 Aligned_cols=251 Identities=34% Similarity=0.546 Sum_probs=213.7
Q ss_pred CceEEEEeecccCCCCCCcceEEeeccC--------CCCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCchHhHHHH
Q 045213 26 AKFSYGYSSFNGKNSSMEEFCEATLSAV--------DRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTA 97 (281)
Q Consensus 26 ~~~~~~~~s~~G~r~~neD~~~~~~~~~--------~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~ 97 (281)
+-++++.+|++|.|+.|||++++..... ......+|+|||||||+.++++|++.+++.+.+.......+.++
T Consensus 63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~a 142 (365)
T PLN03145 63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKV 142 (365)
T ss_pred CceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHH
Confidence 4578999999999999999988643211 12345899999999999999999999999988765555567888
Q ss_pred HHHHHHHHHHHHHhhhh-cCCCCCCccEEEEEEeCCeEEEEecCCceEEEEeCCcccccCCCCCCCChhHHHHHHHcCCe
Q 045213 98 IVEVFTNTDENYLSEEK-GQQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGF 176 (281)
Q Consensus 98 l~~~~~~~~~~~~~~~~-~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~rl~~~gg~ 176 (281)
|.++|..+++.+..... .....+|||++++++.++++|++|+||||+|++|++++++||+||++.++.|++|+...||.
T Consensus 143 l~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~ 222 (365)
T PLN03145 143 VSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGY 222 (365)
T ss_pred HHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCc
Confidence 99999999999876532 23345999999999999999999999999999999999999999999999999999999998
Q ss_pred EEeCCceeecCccccccccCCCCCcc-------ccccCCceeEEEecCCe-EEEEEcCCCccCCCHHHHHHHHH----cc
Q 045213 177 VIWAGTWRVGGVLPVSRAFGDKLLKQ-------YVVAEPEIQEEEIDGID-FIIVASDGLWNVISNEEAVAMVE----HI 244 (281)
Q Consensus 177 ~~~~~~~~~~~~~~~tr~lG~~~~~~-------~~~~~p~~~~~~l~~~d-~lil~SDGv~d~l~~~ei~~~~~----~~ 244 (281)
+.. .+.++.+.+||+||+..+|. .++++|++..+++.++| +||||||||||+|+++++.++++ ..
T Consensus 223 v~~---g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~ 299 (365)
T PLN03145 223 VYD---GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEH 299 (365)
T ss_pred eec---ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcC
Confidence 853 35677778999999987653 36789999999999855 56799999999999999866553 44
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCcEEEEEEeCCCCC
Q 045213 245 TDAEAASRKLITDAYARGSSDNITCVVVRFENSRS 279 (281)
Q Consensus 245 ~~~~~~a~~l~~~a~~~g~~DNiTvivv~~~~~~~ 279 (281)
.+|+++|+.|++.|+.+++.||+|||||+|+...+
T Consensus 300 ~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~ 334 (365)
T PLN03145 300 NDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPP 334 (365)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCC
Confidence 68999999999999999999999999999987544
No 2
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=5.3e-47 Score=333.61 Aligned_cols=247 Identities=37% Similarity=0.592 Sum_probs=209.7
Q ss_pred eeeccCCceEEEEeecccCCCCCCcceEEeeccCCCCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCchHhHHHHHH
Q 045213 20 LTGSRTAKFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIV 99 (281)
Q Consensus 20 ~~~~~~~~~~~~~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~ 99 (281)
.....+..+.+++.|++|.|++|||++++.. ..+..+|+|||||||..+++++++.+.+.+.+..... ..+.|.
T Consensus 14 ~~~~~~~~~~~g~~s~~G~R~~nED~~~v~~----~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~~--~~~~l~ 87 (381)
T PTZ00224 14 VDRAGNSIFRCASACVNGYRESMEDAHLLYL----TDDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEPM--TDERME 87 (381)
T ss_pred cccCCCccEEEEEEeCCCCCCCCCCeeEecc----CCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccccc--cHHHHH
Confidence 3345788899999999999999999988643 2345799999999999999999999998875543221 234588
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCccEEEEEEe-CCeEEEEecCCceEEEEeCCcccccCCCCCCCChhHHHHHHHcCCeEE
Q 045213 100 EVFTNTDENYLSEEKGQQGDTGSTASTAVLL-GDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVI 178 (281)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~gtT~~~~~i~-~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~rl~~~gg~~~ 178 (281)
+++..+++.+..... .+|||++++++. +.+++++|+||||+|++|+|++++||+||++.++.|+.||...||.+.
T Consensus 88 ~a~~~~d~~i~~~~~----~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~ 163 (381)
T PTZ00224 88 ELCLEIDEEWMDSGR----EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVV 163 (381)
T ss_pred HHHHHHHHHHHhccc----CCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEec
Confidence 899999988875432 468999988885 579999999999999999999999999999999999999999999875
Q ss_pred eCCceeecCccccccccCCCCCc---------cccccCCceeEEEecCCeEEEEEcCCCcc-CCCHHHHHHHHHc----c
Q 045213 179 WAGTWRVGGVLPVSRAFGDKLLK---------QYVVAEPEIQEEEIDGIDFIIVASDGLWN-VISNEEAVAMVEH----I 244 (281)
Q Consensus 179 ~~~~~~~~~~~~~tr~lG~~~~~---------~~~~~~p~~~~~~l~~~d~lil~SDGv~d-~l~~~ei~~~~~~----~ 244 (281)
. .|..+.+.+||+||+..+| +.+++.|++..+++.++|+|||||||||| .++++|+.+++.+ .
T Consensus 164 ~---~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D~llLaSDGL~d~~ls~eEi~~iv~~~l~~~ 240 (381)
T PTZ00224 164 S---NRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSNDFIILACDGVFEGNFSNEEVVAFVKEQLETC 240 (381)
T ss_pred c---ccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCCCEEEEECCCcCcCccCHHHHHHHHHHHHhcC
Confidence 3 3667788999999997654 23568899999999999999999999999 7999999999863 4
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCcEEEEEEeCCCCC
Q 045213 245 TDAEAASRKLITDAYARGSSDNITCVVVRFENSRS 279 (281)
Q Consensus 245 ~~~~~~a~~l~~~a~~~g~~DNiTvivv~~~~~~~ 279 (281)
.+++++|+.|++.|+.+|+.||+|||||++...++
T Consensus 241 ~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~~~~~ 275 (381)
T PTZ00224 241 DDLAVVAGRVCDEAIRRGSKDNISCLIVQLKDGAS 275 (381)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCEEEEEEEeeCCCC
Confidence 68999999999999999999999999999987653
No 3
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-47 Score=305.89 Aligned_cols=254 Identities=33% Similarity=0.515 Sum_probs=224.3
Q ss_pred eccCCceEEEEeecccCCCCCCcceEEeec-cCCCCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCch--------H
Q 045213 22 GSRTAKFSYGYSSFNGKNSSMEEFCEATLS-AVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFI--------E 92 (281)
Q Consensus 22 ~~~~~~~~~~~~s~~G~r~~neD~~~~~~~-~~~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~--------~ 92 (281)
-++.+.++||..|+||+|-.|||++..... ...-.+|.+|+|+|||.|++.+.++++.+.+.+....++. +
T Consensus 16 ~G~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~ 95 (379)
T KOG0697|consen 16 EGEGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVE 95 (379)
T ss_pred cCcCCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHH
Confidence 356778999999999999999999876432 2234789999999999999999999999999887665443 4
Q ss_pred hHHHHHHHHHHHHHHHHHhh--hhcCCCCCCccEEEEEEeCCeEEEEecCCceEEEEeCCcccccCCCCCCCChhHHHHH
Q 045213 93 DTKTAIVEVFTNTDENYLSE--EKGQQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRI 170 (281)
Q Consensus 93 ~~~~~l~~~~~~~~~~~~~~--~~~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~rl 170 (281)
+.+..|+.-|.++++.+... ......++|||++.+++....+|++|+||||++++|+|....-|+||.|.+|.|++||
T Consensus 96 ~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~EkeRI 175 (379)
T KOG0697|consen 96 NVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKEKERI 175 (379)
T ss_pred HHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCChHHHHHH
Confidence 67888999999998877664 2333456999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEeCCceeecCccccccccCCCCCc---------cccccCCceeEEEecC-CeEEEEEcCCCccCCCHHHHHHH
Q 045213 171 EDAGGFVIWAGTWRVGGVLPVSRAFGDKLLK---------QYVVAEPEIQEEEIDG-IDFIIVASDGLWNVISNEEAVAM 240 (281)
Q Consensus 171 ~~~gg~~~~~~~~~~~~~~~~tr~lG~~~~~---------~~~~~~p~~~~~~l~~-~d~lil~SDGv~d~l~~~ei~~~ 240 (281)
+.+||.+-. .|.+|.++++|+|||+.+| +.++++|+++...... ++++||++||+||+|+.+|++++
T Consensus 176 qnAGGSVMI---qRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelcef 252 (379)
T KOG0697|consen 176 QNAGGSVMI---QRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEF 252 (379)
T ss_pred hcCCCeEEE---EEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHH
Confidence 999998764 4899999999999999998 4589999999888777 88999999999999999999999
Q ss_pred HHc----cCCHHHHHHHHHHHHHhcCCCCCcEEEEEEeCCCC
Q 045213 241 VEH----ITDAEAASRKLITDAYARGSSDNITCVVVRFENSR 278 (281)
Q Consensus 241 ~~~----~~~~~~~a~~l~~~a~~~g~~DNiTvivv~~~~~~ 278 (281)
++. ..++.++|..+++.++.+|++||+|+|++-|....
T Consensus 253 v~sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~AP 294 (379)
T KOG0697|consen 253 VKSRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAP 294 (379)
T ss_pred HHhhheecccHHHHHHHHHHHHHhccCccCceEEEEecCCCC
Confidence 986 47899999999999999999999999999997644
No 4
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-47 Score=322.52 Aligned_cols=242 Identities=28% Similarity=0.350 Sum_probs=207.0
Q ss_pred CCceEEEEeecccC-CCCCCcceEEeeccCCCCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCch----Hh--HHHH
Q 045213 25 TAKFSYGYSSFNGK-NSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFI----ED--TKTA 97 (281)
Q Consensus 25 ~~~~~~~~~s~~G~-r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~----~~--~~~~ 97 (281)
...+.+++.|..|. |.+|||++.+........ ..+++|||||||++++++|++.+++.|.+..... .. ..+.
T Consensus 5 ~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~ 83 (262)
T COG0631 5 ILSLKVAGLSDVGTVRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEEL 83 (262)
T ss_pred cceeeeeeeccCCCccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHH
Confidence 34578888899995 899999999976333333 6799999999999999999999988887653221 11 5789
Q ss_pred HHHHHHHHHHHHHhhhh--cCCCCCCccEEEEEEeCCeEEEEecCCceEEEEeCCcccccCCCCCCCChhHHHHHHHcCC
Q 045213 98 IVEVFTNTDENYLSEEK--GQQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGG 175 (281)
Q Consensus 98 l~~~~~~~~~~~~~~~~--~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~rl~~~gg 175 (281)
+.+.+..+++.+..... .....||||++++++.+++++++|+||||+|++|++.++|+|+||++.+..+..++...++
T Consensus 84 l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~~ 163 (262)
T COG0631 84 LKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPEE 163 (262)
T ss_pred HHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHHH
Confidence 99999999999988743 4567899999999999999999999999999999999999999999998877776554443
Q ss_pred eEEeCCceeecCccccccccCCCCCccccccCCceeEEEecCCeEEEEEcCCCccCCCHHHHHHHHHccCCHHHHHHHHH
Q 045213 176 FVIWAGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAMVEHITDAEAASRKLI 255 (281)
Q Consensus 176 ~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~d~lil~SDGv~d~l~~~ei~~~~~~~~~~~~~a~~l~ 255 (281)
.. ..+..+.+||+||+.. ...|++....++++|+||||||||||.++++++.++++...+++++++.|+
T Consensus 164 ~~------~~~~~~~ltralG~~~-----~~~p~~~~~~~~~~d~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~li 232 (262)
T COG0631 164 AR------SHPRRNALTRALGDFD-----LLEPDITELELEPGDFLLLCSDGLWDVVSDDEIVDILKNSETPQEAADKLI 232 (262)
T ss_pred HH------hCccchhhhhhcCCCc-----ccceeEEEEEcCCCCEEEEECCCCccCcCHHHHHHHHhcCCCHHHHHHHHH
Confidence 33 2344558999999996 378999999999999999999999999999999999998899999999999
Q ss_pred HHHHhcCCCCCcEEEEEEeCCCC
Q 045213 256 TDAYARGSSDNITCVVVRFENSR 278 (281)
Q Consensus 256 ~~a~~~g~~DNiTvivv~~~~~~ 278 (281)
+.|+.+++.||+|+|++++....
T Consensus 233 ~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 233 ELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred HHHHhcCCCCceEEEEEEeeccc
Confidence 99999999999999999987654
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=5e-46 Score=315.69 Aligned_cols=237 Identities=45% Similarity=0.688 Sum_probs=200.1
Q ss_pred EEEEeecccCCCCCCcceEEeeccC---CCCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCchH--hHHHHHHHHHH
Q 045213 29 SYGYSSFNGKNSSMEEFCEATLSAV---DRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIE--DTKTAIVEVFT 103 (281)
Q Consensus 29 ~~~~~s~~G~r~~neD~~~~~~~~~---~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~--~~~~~l~~~~~ 103 (281)
.+++.+.+|+|+.|||++++..... ......+|+|+|||||..++++++..+.+.+.+...... .+.++|..+|.
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~ 80 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFL 80 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceee
Confidence 4788999999999999999876442 456889999999999999999999999987766543322 57889999999
Q ss_pred H-HHHHHHhhhhc-CCCCCCccEEEEEEeCCeEEEEecCCceEEEEeCCccc-ccCCCCCCCChhHHHHHHHcCCeEEeC
Q 045213 104 N-TDENYLSEEKG-QQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAI-PLSVDHKPDPADERQRIEDAGGFVIWA 180 (281)
Q Consensus 104 ~-~~~~~~~~~~~-~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~-~lt~dh~~~~~~e~~rl~~~gg~~~~~ 180 (281)
. ++..+...... ....+|||++++++.++++|++|+||||+|+++++... +||+||++.++.|++||.+.||.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~- 159 (254)
T PF00481_consen 81 AFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE- 159 (254)
T ss_dssp HHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE-
T ss_pred ecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccccccc-
Confidence 9 77777663221 56679999999999999999999999999999999988 99999999999999999999999887
Q ss_pred CceeecCccccccccCCCCCcc----ccccCCceeEEEecCCe-EEEEEcCCCccCCCHHHHHHHHHccCC----HHHHH
Q 045213 181 GTWRVGGVLPVSRAFGDKLLKQ----YVVAEPEIQEEEIDGID-FIIVASDGLWNVISNEEAVAMVEHITD----AEAAS 251 (281)
Q Consensus 181 ~~~~~~~~~~~tr~lG~~~~~~----~~~~~p~~~~~~l~~~d-~lil~SDGv~d~l~~~ei~~~~~~~~~----~~~~a 251 (281)
..|..+.+.+||+||+..+|+ .++++|++..+++.++| +||||||||||+++++|+.+++++..+ |+.+|
T Consensus 160 -~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a 238 (254)
T PF00481_consen 160 -NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAA 238 (254)
T ss_dssp -TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred -chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHH
Confidence 678999999999999999998 89999999999999975 999999999999999999999988644 99999
Q ss_pred HHHHHHHHhcCCCCCc
Q 045213 252 RKLITDAYARGSSDNI 267 (281)
Q Consensus 252 ~~l~~~a~~~g~~DNi 267 (281)
+.|++.|+++|+.|||
T Consensus 239 ~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 239 EKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHHHHHHTTHHSHE
T ss_pred HHHHHHHHhcCCCCCC
Confidence 9999999999999996
No 6
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=308.87 Aligned_cols=248 Identities=49% Similarity=0.737 Sum_probs=217.2
Q ss_pred EEEeecccCCCCCCcceEEeec----cCCCC-ceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCchH---hHHHHHHHH
Q 045213 30 YGYSSFNGKNSSMEEFCEATLS----AVDRQ-KVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIE---DTKTAIVEV 101 (281)
Q Consensus 30 ~~~~s~~G~r~~neD~~~~~~~----~~~~~-~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~---~~~~~l~~~ 101 (281)
.+..+.+|.|..|||++..... ...+. ...+|||||||||..+|+++.+.+...+.+...... ....+++++
T Consensus 42 ~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~ 121 (330)
T KOG0698|consen 42 GSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRA 121 (330)
T ss_pred eEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHH
Confidence 4444888889999999987544 22233 589999999999999999999999999988776554 478999999
Q ss_pred HH-HHHHHHHhhhhcCCCCCCccEEEEEEeCC-eEEEEecCCceEEEEeCC-cccccCCCCCCCChhHHHHHHHcCCeEE
Q 045213 102 FT-NTDENYLSEEKGQQGDTGSTASTAVLLGD-RLVVANVGDSRVVASRAG-SAIPLSVDHKPDPADERQRIEDAGGFVI 178 (281)
Q Consensus 102 ~~-~~~~~~~~~~~~~~~~~gtT~~~~~i~~~-~~~~a~vGDsr~~l~r~~-~~~~lt~dh~~~~~~e~~rl~~~gg~~~ 178 (281)
|. +.+..+... ......+|||++++++.++ ++|++|+||||+++++.+ ...+||.||.+..+.|+.||...||++.
T Consensus 122 F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~ 200 (330)
T KOG0698|consen 122 FLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVS 200 (330)
T ss_pred HHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEE
Confidence 99 688888765 2223567888888888754 999999999999999766 7999999999999999999999999998
Q ss_pred eCC-ceeecCccccccccCCCCCc-cccccCCceeEEEecC-CeEEEEEcCCCccCCCHHHHHHHHHc----cCCHHHHH
Q 045213 179 WAG-TWRVGGVLPVSRAFGDKLLK-QYVVAEPEIQEEEIDG-IDFIIVASDGLWNVISNEEAVAMVEH----ITDAEAAS 251 (281)
Q Consensus 179 ~~~-~~~~~~~~~~tr~lG~~~~~-~~~~~~p~~~~~~l~~-~d~lil~SDGv~d~l~~~ei~~~~~~----~~~~~~~a 251 (281)
... ..|..+.++++|+|||..+| +.++++|++....+.. +++|||+||||||.++++|..++++. ..++..++
T Consensus 201 ~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~ 280 (330)
T KOG0698|consen 201 NWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAA 280 (330)
T ss_pred EcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHH
Confidence 644 47999999999999999999 8999999999999988 88999999999999999999999998 56899999
Q ss_pred HHHHHHHHhcCCCCCcEEEEEEeCCCC
Q 045213 252 RKLITDAYARGSSDNITCVVVRFENSR 278 (281)
Q Consensus 252 ~~l~~~a~~~g~~DNiTvivv~~~~~~ 278 (281)
..+.+.|+.+++.||+|||||.|.++.
T Consensus 281 ~~l~~~a~~~~s~DnitvvvV~l~~~~ 307 (330)
T KOG0698|consen 281 KLLATEALSRGSKDNITVVVVRLKSSP 307 (330)
T ss_pred HHHHHHHhhcCCCCCeEEEEEEecCcc
Confidence 999999999999999999999998775
No 7
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=4.4e-42 Score=291.19 Aligned_cols=243 Identities=43% Similarity=0.639 Sum_probs=211.4
Q ss_pred eEEEEeecccCCCCCCcceEEeeccCCCCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCc-----hHhHHHHHHHHH
Q 045213 28 FSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDF-----IEDTKTAIVEVF 102 (281)
Q Consensus 28 ~~~~~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~-----~~~~~~~l~~~~ 102 (281)
+.+++.+..|.|+.|||++++...... .++.+|+|||||||+..++++++.+.+.+.+.... ...+...|..++
T Consensus 1 ~~~~~~~~~g~r~~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~ 79 (254)
T cd00143 1 FSAGVSDKGGDRKTNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAF 79 (254)
T ss_pred CceeeecCCCCCCCCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Confidence 356778888899999999998542211 25689999999999999999999999888765432 345678899999
Q ss_pred HHHHHHHHhhhh--cCCCCCCccEEEEEEeCCeEEEEecCCceEEEEeCCcccccCCCCCCCChhHHHHHHHcCCeEEeC
Q 045213 103 TNTDENYLSEEK--GQQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWA 180 (281)
Q Consensus 103 ~~~~~~~~~~~~--~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~rl~~~gg~~~~~ 180 (281)
..+++.+..... .....+|||++++++.+++++++|+||||+|++|+++++++|.||++.++.+..|+...++...
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~-- 157 (254)
T cd00143 80 LRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS-- 157 (254)
T ss_pred HHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE--
Confidence 999999877643 3456799999999999999999999999999999999999999999999889999999988654
Q ss_pred CceeecCccccccccCCCCCccccccCCceeEEEe-cCCeEEEEEcCCCccCCCHHHHHHHHHccC---CHHHHHHHHHH
Q 045213 181 GTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEI-DGIDFIIVASDGLWNVISNEEAVAMVEHIT---DAEAASRKLIT 256 (281)
Q Consensus 181 ~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l-~~~d~lil~SDGv~d~l~~~ei~~~~~~~~---~~~~~a~~l~~ 256 (281)
....++...+|+++|...+++.....|++..+.+ +++|+|||||||||+++++++|.+++.... +++++|+.|++
T Consensus 158 -~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~ 236 (254)
T cd00143 158 -NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVD 236 (254)
T ss_pred -eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCcEEEEECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHH
Confidence 2345667789999999988877789999999999 889999999999999999999999998876 89999999999
Q ss_pred HHHhcCCCCCcEEEEEEe
Q 045213 257 DAYARGSSDNITCVVVRF 274 (281)
Q Consensus 257 ~a~~~g~~DNiTvivv~~ 274 (281)
.|..+++.||+|+|++++
T Consensus 237 ~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 237 LALRRGSHDNITVVVVRL 254 (254)
T ss_pred HHHhCCCCCCEEEEEEeC
Confidence 999999999999999875
No 8
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=4.9e-41 Score=285.23 Aligned_cols=242 Identities=48% Similarity=0.726 Sum_probs=210.4
Q ss_pred CceEEEEeecccCCCCCCcceEEeeccCCCCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCch----HhHHHHHHHH
Q 045213 26 AKFSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFI----EDTKTAIVEV 101 (281)
Q Consensus 26 ~~~~~~~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~----~~~~~~l~~~ 101 (281)
..+.+++.+.+|.|..|||++++.... .....+++|||||||..++.++++.+.+.+.+..... ..+...|.++
T Consensus 4 ~~~~~~~~~~~~~r~~neD~~~~~~~~--~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 81 (255)
T smart00332 4 LGLRYGLSSMQGVRKPMEDAHVITPDL--SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKA 81 (255)
T ss_pred CceeEEEecCCCCCCCCcceEEEeccC--CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHH
Confidence 346778878888999999999986521 1467899999999999999999999998887654322 3477889999
Q ss_pred HHHHHHHHHhhhhc--CCCCCCccEEEEEEeCCeEEEEecCCceEEEEeCCcccccCCCCCCCChhHHHHHHHcCCeEEe
Q 045213 102 FTNTDENYLSEEKG--QQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIW 179 (281)
Q Consensus 102 ~~~~~~~~~~~~~~--~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~rl~~~gg~~~~ 179 (281)
+..+++.+...... ....+|||++++++..++++++|+||||+|++|++++.++|+||++.++.+..++...++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~ 161 (255)
T smart00332 82 FLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVIN 161 (255)
T ss_pred HHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEEC
Confidence 99999988776443 2356899999999999999999999999999999999999999999999999999999887643
Q ss_pred CCceeecCccccccccCCCCCccccccCCceeEEEe-cCCeEEEEEcCCCccCCCHHHHHHHHHccC---CHHHHHHHHH
Q 045213 180 AGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEI-DGIDFIIVASDGLWNVISNEEAVAMVEHIT---DAEAASRKLI 255 (281)
Q Consensus 180 ~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l-~~~d~lil~SDGv~d~l~~~ei~~~~~~~~---~~~~~a~~l~ 255 (281)
. +.++.+.+||++|...+++.+...|++...++ +++|+|||||||||++++++++.+++.+.. ++.++++.|+
T Consensus 162 ~---~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~ 238 (255)
T smart00332 162 G---RVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLI 238 (255)
T ss_pred C---eECCeEecccccCCHhhcCCeEeeeEEEEEEecCCCcEEEEECCccccCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 2 55666789999999998888889999999996 889999999999999999999999998765 6999999999
Q ss_pred HHHHhcCCCCCcEEEEE
Q 045213 256 TDAYARGSSDNITCVVV 272 (281)
Q Consensus 256 ~~a~~~g~~DNiTvivv 272 (281)
+.|..++..||+|+||+
T Consensus 239 ~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 239 DLALARGSKDNITVIVV 255 (255)
T ss_pred HHHHHcCCCCCeEEEEC
Confidence 99999999999999985
No 9
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=3.2e-41 Score=312.43 Aligned_cols=242 Identities=22% Similarity=0.283 Sum_probs=185.0
Q ss_pred CceEEEEeecccC-CCCCCcceEEeecc-----CCC---CceEEEEEecCCChhHHHHHHHHHHHHHHhc----CCCchH
Q 045213 26 AKFSYGYSSFNGK-NSSMEEFCEATLSA-----VDR---QKVAFFGVYDGHGGSRTSEYLRNHLFKNLSS----HPDFIE 92 (281)
Q Consensus 26 ~~~~~~~~s~~G~-r~~neD~~~~~~~~-----~~~---~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~----~~~~~~ 92 (281)
..+++++.|++|. |++|||++.+.... ..+ ....+|+|||||||+.+++.|++.+.+.+.+ ......
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~ 452 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDEL 452 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccc
Confidence 3588999999995 99999998764311 111 1347899999999999888777766665543 211111
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhc----CCCCCCccEEEEEEeCCeEEEEecCCceEEEE-eCCcccccCCCCCCCChhHH
Q 045213 93 DTKTAIVEVFTNTDENYLSEEKG----QQGDTGSTASTAVLLGDRLVVANVGDSRVVAS-RAGSAIPLSVDHKPDPADER 167 (281)
Q Consensus 93 ~~~~~l~~~~~~~~~~~~~~~~~----~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~-r~~~~~~lt~dh~~~~~~e~ 167 (281)
...+.+.+++..+|+.+...... ...+||||++++++.++++|++||||||+|++ |+|+++|||+||++.+
T Consensus 453 ~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~---- 528 (645)
T PRK14559 453 PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQ---- 528 (645)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHH----
Confidence 23567899999999999764321 34569999999999999999999999999998 5789999999999653
Q ss_pred HHHHHcCCeEEeCCceeecCccccccccCCCCCccccccCCceeEEEecCCeEEEEEcCCCccC--CCH---HHHHHHHH
Q 045213 168 QRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNV--ISN---EEAVAMVE 242 (281)
Q Consensus 168 ~rl~~~gg~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~d~lil~SDGv~d~--l~~---~ei~~~~~ 242 (281)
++.+.| +........++.+.+||++|+...+ ..+|++..+.++++|+||||||||||+ +.. +++..++.
T Consensus 529 -~lv~~G--i~~~~a~~~p~~~~LTrALG~~~~~---~l~Pdi~~~~L~~gD~lLLCSDGL~D~~~ve~~~~~~l~~il~ 602 (645)
T PRK14559 529 -REIQRG--VEPQIAYARPDAYQLTQALGPRDNS---AIQPDIQFLEIEEDTLLLLCSDGLSDNDLLETHWQTHLLPLLS 602 (645)
T ss_pred -HHHHhC--CCHHHHhcCcccceeeeccCCCCCC---cccceEEEEEcCCCCEEEEECCCCCCCcccchHHHHHHHHHHh
Confidence 344444 2222222234567899999986432 357999999999999999999999994 443 45567777
Q ss_pred ccCCHHHHHHHHHHHHHhcCCCCCcEEEEEEeCCC
Q 045213 243 HITDAEAASRKLITDAYARGSSDNITCVVVRFENS 277 (281)
Q Consensus 243 ~~~~~~~~a~~l~~~a~~~g~~DNiTvivv~~~~~ 277 (281)
...+++++++.|++.|+.+|+.||+|+|||+++..
T Consensus 603 ~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~ 637 (645)
T PRK14559 603 SSANLDQGLNKLIDLANQYNGHDNITAILVRLKVR 637 (645)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccC
Confidence 77899999999999999999999999999998644
No 10
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=253.06 Aligned_cols=156 Identities=40% Similarity=0.659 Sum_probs=143.1
Q ss_pred CCccEEEEEEeCCeEEEEecCCceEEEEeCCcccccCCCCCCCChhHHHHHHHcCCeEEeCCceeecCccccccccCCCC
Q 045213 120 TGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKL 199 (281)
Q Consensus 120 ~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~rl~~~gg~~~~~~~~~~~~~~~~tr~lG~~~ 199 (281)
+|||+++|++.++++++||.||||+++.|+|+.+-++.||.|..+-|..||..+||.++.++ |++|.++++|+||+..
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlDG--RVNGGLNLSRA~GDHa 407 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLDG--RVNGGLNLSRAFGDHA 407 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeecc--eecCccchhhhhhhhh
Confidence 79999999999999999999999999999999999999999999999999999999999875 8999999999999999
Q ss_pred Ccc---------ccccCCceeEEEecC-CeEEEEEcCCCccCCCHHHHHHHHHc----cCCHHHHHHHHHHHHHhcC---
Q 045213 200 LKQ---------YVVAEPEIQEEEIDG-IDFIIVASDGLWNVISNEEAVAMVEH----ITDAEAASRKLITDAYARG--- 262 (281)
Q Consensus 200 ~~~---------~~~~~p~~~~~~l~~-~d~lil~SDGv~d~l~~~ei~~~~~~----~~~~~~~a~~l~~~a~~~g--- 262 (281)
||. .+.+-|+|....|.+ ++|+|+++||||++|+.+++.++++. .....++|+.|++.++.-.
T Consensus 408 YK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~G 487 (542)
T KOG0699|consen 408 YKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTDG 487 (542)
T ss_pred hhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCCC
Confidence 883 478899999999998 78999999999999999999888864 4678899999999998752
Q ss_pred ---CCCCcEEEEEEeCCC
Q 045213 263 ---SSDNITCVVVRFENS 277 (281)
Q Consensus 263 ---~~DNiTvivv~~~~~ 277 (281)
+.||+|||++.|+.+
T Consensus 488 DGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 488 DGTGCDNMTVIITTFKRK 505 (542)
T ss_pred CCcCCCcceEEEEEeccc
Confidence 579999999999743
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-32 Score=234.92 Aligned_cols=218 Identities=38% Similarity=0.622 Sum_probs=177.9
Q ss_pred CcceEEeeccCCCCceEEEEEecCCChhHHHHHHHHHHHHHHhcC-------------CC--------------------
Q 045213 43 EEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSH-------------PD-------------------- 89 (281)
Q Consensus 43 eD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~-------------~~-------------------- 89 (281)
||.+.+... ....+.++||+|||||..+++++++.+..++..+ .+
T Consensus 86 edrv~~~~s--~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~ 163 (390)
T KOG0700|consen 86 EDRVSVAVS--EENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSAD 163 (390)
T ss_pred cCcceeeee--ccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccC
Confidence 455444322 1567799999999999999999999998877611 11
Q ss_pred c-hHhHHHHHHHHHHHHHHHHHhh------hhcCCCCCCccEEEEEEeCCeEEEEecCCceEEEEe---CC---cccccC
Q 045213 90 F-IEDTKTAIVEVFTNTDENYLSE------EKGQQGDTGSTASTAVLLGDRLVVANVGDSRVVASR---AG---SAIPLS 156 (281)
Q Consensus 90 ~-~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r---~~---~~~~lt 156 (281)
. .....++|.++|.++++.+... ...+...+|+++++.++.++.+|+||+||||+++.+ ++ ...|||
T Consensus 164 ~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS 243 (390)
T KOG0700|consen 164 QRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLS 243 (390)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecC
Confidence 1 3567889999999999999763 234556799999999999999999999999999853 33 358999
Q ss_pred CCCCCCChhHHHHHHHcCCe---EEeCCceeecCccccccccCCCCCc---------------------cccccCCceeE
Q 045213 157 VDHKPDPADERQRIEDAGGF---VIWAGTWRVGGVLPVSRAFGDKLLK---------------------QYVVAEPEIQE 212 (281)
Q Consensus 157 ~dh~~~~~~e~~rl~~~gg~---~~~~~~~~~~~~~~~tr~lG~~~~~---------------------~~~~~~p~~~~ 212 (281)
.||+..++.|.+||...+.. +.....+|..|.++++|+||+..+| |+++++|.++.
T Consensus 244 ~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~ 323 (390)
T KOG0700|consen 244 TDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITH 323 (390)
T ss_pred hhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEE
Confidence 99999999999999888762 3334447999999999999999887 67899999999
Q ss_pred EEecC-CeEEEEEcCCCccCCCHHHHHHHHHcc----CCHHHHHHHHHHHHHhcC
Q 045213 213 EEIDG-IDFIIVASDGLWNVISNEEAVAMVEHI----TDAEAASRKLITDAYARG 262 (281)
Q Consensus 213 ~~l~~-~d~lil~SDGv~d~l~~~ei~~~~~~~----~~~~~~a~~l~~~a~~~g 262 (281)
..|.+ +.|+||+|||+|++|+++|+.+++.+. ..-+.+|+.|+++|+.+.
T Consensus 324 HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~a 378 (390)
T KOG0700|consen 324 HKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRA 378 (390)
T ss_pred EEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhh
Confidence 99999 669999999999999999999999874 223578999999987654
No 12
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-27 Score=196.97 Aligned_cols=203 Identities=21% Similarity=0.251 Sum_probs=143.5
Q ss_pred CCCcceEEeeccCCCCceEEEEEecCCChhHH-----HHHHHHHH---HHHHhcCCCchHhHHHHHHHHHHHHHHHHHhh
Q 045213 41 SMEEFCEATLSAVDRQKVAFFGVYDGHGGSRT-----SEYLRNHL---FKNLSSHPDFIEDTKTAIVEVFTNTDENYLSE 112 (281)
Q Consensus 41 ~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~-----a~~a~~~~---~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 112 (281)
.-||+|++.. .....++|||||+|||.- +.+..+.+ .+.+........++...|..++.++.+ +
T Consensus 90 ~GEDa~Fvss----~~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~----~ 161 (330)
T KOG1379|consen 90 GGEDAWFVSS----NPHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELKS----Q 161 (330)
T ss_pred CCCcceeecc----CcccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHhh----c
Confidence 5699999954 456689999999999974 44444433 222333333345678888877766543 1
Q ss_pred hhcCCCCCCccEEEEEEe--CCeEEEEecCCceEEEEeCCcccccCCCCCCCChhHHHHHHHcCCeEEeCCceeecCccc
Q 045213 113 EKGQQGDTGSTASTAVLL--GDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLP 190 (281)
Q Consensus 113 ~~~~~~~~gtT~~~~~i~--~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~rl~~~gg~~~~~~~~~~~~~~~ 190 (281)
+...-+++|++++++. +++||++|+|||.+.++|+|++.+-|..+.+.-..-+| +.. ..++
T Consensus 162 --~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~PyQ--------Ls~----~p~~--- 224 (330)
T KOG1379|consen 162 --KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPYQ--------LSS----PPEG--- 224 (330)
T ss_pred --CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCcee--------ecc----CCcc---
Confidence 1223367888888887 78999999999999999999999988876643211110 000 0000
Q ss_pred cccccCCCCCccccccCCceeEEEecCCeEEEEEcCCCccCCCHHHHHHHHHc-----cCCHHHHHHHHHHHHHhc----
Q 045213 191 VSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAMVEH-----ITDAEAASRKLITDAYAR---- 261 (281)
Q Consensus 191 ~tr~lG~~~~~~~~~~~p~~~~~~l~~~d~lil~SDGv~d~l~~~ei~~~~~~-----~~~~~~~a~~l~~~a~~~---- 261 (281)
...++++. ....+.+.+++++||+|||+||||||+|.+++|.+++.. ..+++..|+.|++.|...
T Consensus 225 ~~~~~~d~------p~~ad~~~~~v~~GDvIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~ 298 (330)
T KOG1379|consen 225 YSSYISDV------PDSADVTSFDVQKGDVIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDP 298 (330)
T ss_pred ccccccCC------ccccceEEEeccCCCEEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCc
Confidence 12223333 445678899999999999999999999999999999965 357899999999987543
Q ss_pred -------------------CCCCCcEEEEEEe
Q 045213 262 -------------------GSSDNITCVVVRF 274 (281)
Q Consensus 262 -------------------g~~DNiTvivv~~ 274 (281)
|+.||||+||..+
T Consensus 299 ~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 299 KFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred CcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 4689999999754
No 13
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-26 Score=192.65 Aligned_cols=221 Identities=30% Similarity=0.464 Sum_probs=171.4
Q ss_pred CCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCC----------------------------------------chHhH
Q 045213 55 RQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPD----------------------------------------FIEDT 94 (281)
Q Consensus 55 ~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~----------------------------------------~~~~~ 94 (281)
..+..+|.+||||.|..+|-.|++.+.+.+..... ...-.
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 45789999999999999999988876555433210 00124
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCCCccEEEEEEeCCeEEEEecCCceEEEEeCCcccccCCCCCCCChhHHHHHHHcC
Q 045213 95 KTAIVEVFTNTDENYLSEEKGQQGDTGSTASTAVLLGDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAG 174 (281)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~rl~~~g 174 (281)
..+|..+|+.+++++..+.......+|||+.+++..-+++|++|.||||++++|++++++++++-++.. |+||++...
T Consensus 221 iGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPet--ERqRlQ~La 298 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPET--ERQRLQELA 298 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHH--HHHHHHHHh
Confidence 678999999999999998877778899999999999999999999999999999999999999999875 777776542
Q ss_pred Ce--------EE--------------------------------------------eCCceeecCccccccccCCCCC--
Q 045213 175 GF--------VI--------------------------------------------WAGTWRVGGVLPVSRAFGDKLL-- 200 (281)
Q Consensus 175 g~--------~~--------------------------------------------~~~~~~~~~~~~~tr~lG~~~~-- 200 (281)
-. .+ .....|+-+.+.++|.+||..+
T Consensus 299 f~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv 378 (493)
T KOG1323|consen 299 FRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKV 378 (493)
T ss_pred hcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeee
Confidence 11 00 0001223344679999999875
Q ss_pred -------ccccccCCceeEEEec-----CCeEEEEEcCCCccCCCHHHHHHHHHcc------CCHH---HHHHHHHHHHH
Q 045213 201 -------KQYVVAEPEIQEEEID-----GIDFIIVASDGLWNVISNEEAVAMVEHI------TDAE---AASRKLITDAY 259 (281)
Q Consensus 201 -------~~~~~~~p~~~~~~l~-----~~d~lil~SDGv~d~l~~~ei~~~~~~~------~~~~---~~a~~l~~~a~ 259 (281)
||++.+.|++...++. ++|++||+|||+||+++++|+..+++.. .+|. .+|+.|+..|.
T Consensus 379 ~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~ar 458 (493)
T KOG1323|consen 379 VDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAAR 458 (493)
T ss_pred ecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhc
Confidence 4778899999988775 4789999999999999999999999763 3443 56777777663
Q ss_pred hc-------------CCCCCcEEEEEEeCCC
Q 045213 260 AR-------------GSSDNITCVVVRFENS 277 (281)
Q Consensus 260 ~~-------------g~~DNiTvivv~~~~~ 277 (281)
.. |+.|||||.||.+...
T Consensus 459 g~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 459 GQQKDRGWRMNNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred CccCCCceeccCCCcCCCCceEEEEEeccCC
Confidence 21 4789999999998643
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.90 E-value=3.1e-23 Score=193.15 Aligned_cols=244 Identities=24% Similarity=0.372 Sum_probs=205.7
Q ss_pred eEEEEeecccCCCCCCcceEEeeccCCCCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCchHhHHHHHHHHHHHHHH
Q 045213 28 FSYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDE 107 (281)
Q Consensus 28 ~~~~~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~ 107 (281)
+++|++...|.|..+--+......+.. .....|+.+||-+......+....+.+++.+......+-.+.|+..|...++
T Consensus 522 ~t~Gv~~~~gqrnk~c~~~~~v~nf~~-~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~~r 600 (1081)
T KOG0618|consen 522 WTYGVAGVSGQRNKVCSRAVWVENFFL-NPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRLNR 600 (1081)
T ss_pred eeeccchhcccccchhhhhhhhhhccc-CCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhh
Confidence 679999999988777655443333332 3448999999999999999998888888877655444446669999999999
Q ss_pred HHHhhhhcCCCCCCccEEEEEEeC--------CeEEEEecCCceEEEEeCCcccccCCCCC-CCChhHHHHHHHcCCeEE
Q 045213 108 NYLSEEKGQQGDTGSTASTAVLLG--------DRLVVANVGDSRVVASRAGSAIPLSVDHK-PDPADERQRIEDAGGFVI 178 (281)
Q Consensus 108 ~~~~~~~~~~~~~gtT~~~~~i~~--------~~~~~a~vGDsr~~l~r~~~~~~lt~dh~-~~~~~e~~rl~~~gg~~~ 178 (281)
++-..+. .-|..++.+.+.. .+++.||+|+|.++++++|+..++|+-.. ..+++|.+|+.+.+|++.
T Consensus 601 klg~~g~----~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ 676 (1081)
T KOG0618|consen 601 KLGEEGQ----VLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFIT 676 (1081)
T ss_pred hhhhhhc----cccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeec
Confidence 9855433 3455666666643 36899999999999999999988887764 448999999999999998
Q ss_pred eCCceeecCccccccccCCCCCccccccCCceeEEEecC-CeEEEEEcCCCccCCCHHHHHHHHHccCCHHHHHHHHHHH
Q 045213 179 WAGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDG-IDFIIVASDGLWNVISNEEAVAMVEHITDAEAASRKLITD 257 (281)
Q Consensus 179 ~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~-~d~lil~SDGv~d~l~~~ei~~~~~~~~~~~~~a~~l~~~ 257 (281)
.+ .+..|+...||++|...+.|.+.++|++....|.+ +++||+++-++|++|+.++..+.+++..+|-.+|++|++.
T Consensus 677 ed--~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AAkKL~d~ 754 (1081)
T KOG0618|consen 677 ED--NKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPLLAAKKLCDL 754 (1081)
T ss_pred CC--CeeeceeeeeeecccccccccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchHHHHHHHHHH
Confidence 63 57888889999999999999999999999999998 8899999999999999999999999999999999999999
Q ss_pred HHhcCCCCCcEEEEEEeCCCC
Q 045213 258 AYARGSSDNITCVVVRFENSR 278 (281)
Q Consensus 258 a~~~g~~DNiTvivv~~~~~~ 278 (281)
|..+|..||++|+||++....
T Consensus 755 AqSYgc~~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 755 AQSYGCAENVSVLVVRLNHLE 775 (1081)
T ss_pred HHhcccccCeeEEEEEeecch
Confidence 999999999999999987654
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.89 E-value=3.1e-22 Score=165.33 Aligned_cols=178 Identities=19% Similarity=0.252 Sum_probs=102.3
Q ss_pred eecccCCCCCCcceEEeeccCCCCceEEEEEecCCChhH----HHHHHHHHHHHHHhcCCCchHh--HHHHHHHHHHHHH
Q 045213 33 SSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSR----TSEYLRNHLFKNLSSHPDFIED--TKTAIVEVFTNTD 106 (281)
Q Consensus 33 ~s~~G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~----~a~~a~~~~~~~l~~~~~~~~~--~~~~l~~~~~~~~ 106 (281)
.+++|.++.|||++.+.. ..+..+++||||+||.. ++.++++.+.+.+.+....... ....++.....+.
T Consensus 3 ~sh~~~~~~nqD~~~~~~----~~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRT----DDDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEIL 78 (212)
T ss_dssp ----TTSSS--EEEEEE-----TCCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeee----CCCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 478899999999999754 33446779999999544 5556666677777666654332 2233333333333
Q ss_pred HHH-----HhhhhcCCCCCCccEEEEEEeCCeEEEEecCCceEEE-EeCCcccccCCCCCCCChhHHHHHHHcCCeEEeC
Q 045213 107 ENY-----LSEEKGQQGDTGSTASTAVLLGDRLVVANVGDSRVVA-SRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWA 180 (281)
Q Consensus 107 ~~~-----~~~~~~~~~~~gtT~~~~~i~~~~~~~a~vGDsr~~l-~r~~~~~~lt~dh~~~~~~e~~rl~~~gg~~~~~ 180 (281)
..+ ..........++||++++++.+++++++|+||||+|+ .+++++.+++.+|+.. ..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~----~~------------ 142 (212)
T PF13672_consen 79 SIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGE----YP------------ 142 (212)
T ss_dssp HHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHH----HH------------
T ss_pred HHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccch----hh------------
Confidence 221 1112345567899999999999999999999999975 5899999999999711 11
Q ss_pred CceeecCccccccccCCCCCccccccCCceeEEEecCCeEEEEEcCCCccCCCHHH-HHHHHHc
Q 045213 181 GTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEE-AVAMVEH 243 (281)
Q Consensus 181 ~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~d~lil~SDGv~d~l~~~e-i~~~~~~ 243 (281)
..++.+.... .....++..+++.+++.|+|||||||+.+...+ +..++..
T Consensus 143 ---------~~~~~~~~~~----~~~~~~~~~~~~~~~d~ilL~SDG~~~~l~~~~~~~~~l~~ 193 (212)
T PF13672_consen 143 ---------NQTRSLTGDD----PEPDVQYGSIPLEEGDVILLCSDGVWDNLRSYEDLEQFLKD 193 (212)
T ss_dssp ---------HCTTSCCHHC----CCTETEEEEEE--TT-EEEEE-HHHHTTS-HHHHHHHH---
T ss_pred ---------hhhhccCccc----cccCCeEEEEEcCCCCEEEEECcCccccCCCHHHHHHHhhh
Confidence 0122222221 122345667788899999999999999998654 6666654
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.84 E-value=5.4e-19 Score=143.85 Aligned_cols=183 Identities=13% Similarity=0.132 Sum_probs=132.3
Q ss_pred EEEEeecccCCCCCCcceEEeeccCCCCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCchHhHHHHHHHHHHHHHHH
Q 045213 29 SYGYSSFNGKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDEN 108 (281)
Q Consensus 29 ~~~~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 108 (281)
.++.....+ .....|.|.+.. ..++..+++|+||||+...|.+++..+...+.+...... .+.+.+..+++.
T Consensus 5 ~~~~~~~p~-~~~~GD~~~~~~---~~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~----~~~~~l~~~n~~ 76 (193)
T smart00331 5 LIAQYYEDA-TQVGGDFYDVVK---LPEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGI----SLSQILERLNRA 76 (193)
T ss_pred EEEEEEcch-HhcCccEEEEEE---eCCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCC----CHHHHHHHHHHH
Confidence 334433333 466778887643 123358999999999888888888888777765443211 245556666766
Q ss_pred HHhhhhcCCCCCCccEEEEEE--eCCeEEEEecCCceEEEEe-CCcccccCCCCCCCChhHHHHHHHcCCeEEeCCceee
Q 045213 109 YLSEEKGQQGDTGSTASTAVL--LGDRLVVANVGDSRVVASR-AGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRV 185 (281)
Q Consensus 109 ~~~~~~~~~~~~gtT~~~~~i--~~~~~~~a~vGDsr~~l~r-~~~~~~lt~dh~~~~~~e~~rl~~~gg~~~~~~~~~~ 185 (281)
+... ....+++|++++++ .+++++++|+||+|+|+++ ++...+.+.+.
T Consensus 77 l~~~---~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~-------------------------- 127 (193)
T smart00331 77 IYEN---GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL-------------------------- 127 (193)
T ss_pred HHhc---CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC--------------------------
Confidence 6554 23457899999998 5789999999999999998 55555544432
Q ss_pred cCccccccccCCCCCccccccCCceeEEEecCCeEEEEEcCCCccCCCHHHHHHHHHcc--CCHHHHHHHHHHHHH
Q 045213 186 GGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEEAVAMVEHI--TDAEAASRKLITDAY 259 (281)
Q Consensus 186 ~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~d~lil~SDGv~d~l~~~ei~~~~~~~--~~~~~~a~~l~~~a~ 259 (281)
+..+|... ..+++...+++++||.|+|+|||+++.++++++.+++.+. .+++++++++.+.+.
T Consensus 128 ------~~~lG~~~-----~~~~~~~~~~l~~gd~l~l~TDGl~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 128 ------GAPLGLEP-----DVEVDVRELTLEPGDLLLLYTDGLTEARNPERLEELLEELLGSPPAEIAQRILEELL 192 (193)
T ss_pred ------CceeeeCC-----CCcceeEEEeeCCCCEEEEECCCccccCChHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 23445432 2346678889999999999999999999999999999875 468898998887754
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.76 E-value=7.3e-17 Score=154.94 Aligned_cols=190 Identities=15% Similarity=0.118 Sum_probs=134.6
Q ss_pred cCCCCCCcceEEeeccCCCCceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCchHhHHHHHHHHHHHHHHHHHhhhhcC
Q 045213 37 GKNSSMEEFCEATLSAVDRQKVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQ 116 (281)
Q Consensus 37 G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 116 (281)
+.+..+.|.+.+... .+....++|+||+|+...|..++..+.+.+.+......+ ...++..+|+.+... .
T Consensus 562 ~g~~vsGD~y~~~~l---~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~----~~~ai~~lN~~L~~~---~ 631 (764)
T TIGR02865 562 DGELVSGDSYSFGKL---SAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD----REVAIKTVNSILSLR---S 631 (764)
T ss_pred CCCcccCceEEEEEE---CCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHhC---C
Confidence 346788999977431 233478999999996666666666665555432211111 244555666655433 1
Q ss_pred CCCCCccEEEEEEe--CCeEEEEecCCceEEEEeCCcccccCCCCCCCChhHHHHHHHcCCeEEeCCceeecCccccccc
Q 045213 117 QGDTGSTASTAVLL--GDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRA 194 (281)
Q Consensus 117 ~~~~gtT~~~~~i~--~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~rl~~~gg~~~~~~~~~~~~~~~~tr~ 194 (281)
...+.+|+.+++++ .+++.++++|+++.|+.|++.+.+++..+.|
T Consensus 632 ~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP--------------------------------- 678 (764)
T TIGR02865 632 TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP--------------------------------- 678 (764)
T ss_pred CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce---------------------------------
Confidence 22467999999985 6789999999999999999888877654331
Q ss_pred cCCCCCccccccCCceeEEEecCCeEEEEEcCCCccCCCHHH-----HHHHHHc--cCCHHHHHHHHHHHHHhcC---CC
Q 045213 195 FGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWNVISNEE-----AVAMVEH--ITDAEAASRKLITDAYARG---SS 264 (281)
Q Consensus 195 lG~~~~~~~~~~~p~~~~~~l~~~d~lil~SDGv~d~l~~~e-----i~~~~~~--~~~~~~~a~~l~~~a~~~g---~~ 264 (281)
+|-.. ..+++....++++||.|+|+|||++|..++.+ +.+++++ ..+|+++++.|++.+.+.. ..
T Consensus 679 lGil~-----~~~~~~~~~~L~~GD~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~~~~~ 753 (764)
T TIGR02865 679 IGILD-----EVDVELVRKKLKNGDLIVMVSDGVLEGEKEVEGKVLWLVRKLKETNTNDPEEIAEYLLEKAKELRSGKIK 753 (764)
T ss_pred eEecc-----CCccceEEEEeCCCCEEEEECCCCCcCCcccccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCCCCC
Confidence 12111 23566778899999999999999999876433 7777764 3689999999999997643 47
Q ss_pred CCcEEEEEEe
Q 045213 265 DNITCVVVRF 274 (281)
Q Consensus 265 DNiTvivv~~ 274 (281)
||+|++++++
T Consensus 754 DD~Tvlvirv 763 (764)
T TIGR02865 754 DDMTVIVAKV 763 (764)
T ss_pred CCeEEEEEEe
Confidence 9999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.67 E-value=7.4e-15 Score=119.34 Aligned_cols=175 Identities=19% Similarity=0.205 Sum_probs=112.9
Q ss_pred ceEEEEEecCCChhHHHHHHHHHHHHHHhcCCCchHhHHHHHHHHHHHHHHHHHhhhhcCCCCCCccEEEEEEe--CCeE
Q 045213 57 KVAFFGVYDGHGGSRTSEYLRNHLFKNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQQGDTGSTASTAVLL--GDRL 134 (281)
Q Consensus 57 ~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~i~--~~~~ 134 (281)
+.++++|+|++|..-.|.+.+..+...+........+ ..+.+..+|+.+....... ...+|++++.++ .+++
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~l 76 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGTL 76 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceEE
Confidence 4589999999995555554444444444322211111 4445555666664443222 356788888875 5689
Q ss_pred EEEecCCceEEEEeCCc--ccccCCCCCCCChhHHHHHHHcCCeEEeCCceeecCccccccccCCCCCccccccCCceeE
Q 045213 135 VVANVGDSRVVASRAGS--AIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQE 212 (281)
Q Consensus 135 ~~a~vGDsr~~l~r~~~--~~~lt~dh~~~~~~e~~rl~~~gg~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~ 212 (281)
+++|+|+++++++|+++ ...+..... .+|-.. ..++....
T Consensus 77 ~~~~aG~~~~l~~~~~~~~~~~~~~~~~---------------------------------~lG~~~-----~~~~~~~~ 118 (193)
T PF07228_consen 77 TYANAGHPPPLLLRPGGREIEQLESEGP---------------------------------PLGIFE-----DIDYQEQE 118 (193)
T ss_dssp EEEEESSSEEEEEETTCTEEEEETCSSB---------------------------------BCSSSC-----TTCEEEEE
T ss_pred EEeCCCCCCEEEEeccccceeecccCcc---------------------------------ceeeec-----cccccceE
Confidence 99999999999999843 222222111 134322 23556778
Q ss_pred EEecCCeEEEEEcCCCccCCCHH-------HHHHHHHc--cCCHHHHHHHHHHHHHhc---CCCCCcEEEEEEeC
Q 045213 213 EEIDGIDFIIVASDGLWNVISNE-------EAVAMVEH--ITDAEAASRKLITDAYAR---GSSDNITCVVVRFE 275 (281)
Q Consensus 213 ~~l~~~d~lil~SDGv~d~l~~~-------ei~~~~~~--~~~~~~~a~~l~~~a~~~---g~~DNiTvivv~~~ 275 (281)
+++++||.|+|+|||++|....+ .+.+++.+ ..+++++++.|++.+... ...||+|+++++++
T Consensus 119 ~~l~~gd~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 119 IQLEPGDRLLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp EE--TTEEEEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE-
T ss_pred EEeccccEEEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEC
Confidence 89999999999999999998543 44566663 367999999999998773 47899999999874
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.75 E-value=1.5e-06 Score=77.79 Aligned_cols=187 Identities=14% Similarity=0.111 Sum_probs=117.0
Q ss_pred CCCcceEEeeccCCCCceEEEEEecCCC-hhHHHHHHHHHH---HHHHhcCCCchHhHHHHHHHHHHHHHHHHHhhhhcC
Q 045213 41 SMEEFCEATLSAVDRQKVAFFGVYDGHG-GSRTSEYLRNHL---FKNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQ 116 (281)
Q Consensus 41 ~neD~~~~~~~~~~~~~~~~~~V~DG~G-G~~~a~~a~~~~---~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 116 (281)
..-|.|-+.. .+.....++|.|.+| |-.++-. .... .+.+.... .-++. +.+..+|+.+.......
T Consensus 161 vGGD~yd~~~---~~~~~~~i~I~DvsG~Gv~aal~-m~~~~~~~~~~~~~~--~~~p~----~~l~~~n~~~~~~~~~~ 230 (367)
T COG2208 161 VGGDYYDFIQ---LGEKRLRIGIGDVSGKGVPAALL-MLMPKLALRLLLESG--PLDPA----DVLETLNRVLKQNLEED 230 (367)
T ss_pred cCCceEEEEE---ECCcEEEEEEEeccCCCHHHHHH-HHHHHHHHHHhhhcc--cCCHH----HHHHHHHHHHHhcccCC
Confidence 4456665532 122568999999999 5555444 2222 22222221 11222 23344444444432221
Q ss_pred CCCCCccEEEEEEe--CCeEEEEecCCceEEEEeCCcccccCCCCCCCChhHHHHHHHcCCeEEeCCceeecCccccccc
Q 045213 117 QGDTGSTASTAVLL--GDRLVVANVGDSRVVASRAGSAIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRA 194 (281)
Q Consensus 117 ~~~~gtT~~~~~i~--~~~~~~a~vGDsr~~l~r~~~~~~lt~dh~~~~~~e~~rl~~~gg~~~~~~~~~~~~~~~~tr~ 194 (281)
+-+|+...+++ ...+.++++|---.++++.++-.....-+ ....+
T Consensus 231 ---~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~------------------------------~~g~p 277 (367)
T COG2208 231 ---MFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLT------------------------------ALGLP 277 (367)
T ss_pred ---cEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEcc------------------------------CCCce
Confidence 55888888885 57899999999999998875432111111 12334
Q ss_pred cCCCCCccccccCCceeEEEecCCeEEEEEcCCCcc-------CCCHHHHHHHHHc--cCCHHHHHHHHHHHHHhc----
Q 045213 195 FGDKLLKQYVVAEPEIQEEEIDGIDFIIVASDGLWN-------VISNEEAVAMVEH--ITDAEAASRKLITDAYAR---- 261 (281)
Q Consensus 195 lG~~~~~~~~~~~p~~~~~~l~~~d~lil~SDGv~d-------~l~~~ei~~~~~~--~~~~~~~a~~l~~~a~~~---- 261 (281)
+|... ...+.+...++++||.+++.|||+.+ .+..+.+.+++.. ..+++++++.+.+...+.
T Consensus 278 iG~~~-----~~~~~~~~~~l~~gd~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~~~~ 352 (367)
T COG2208 278 IGLLP-----DYQYEVASLQLEPGDLLVLYTDGVTEARNSDGEFFGLERLLKILGRLLGQPAEEILEAILESLEELQGDQ 352 (367)
T ss_pred eeecC-----CccchheeEEecCCCEEEEEcCCeeeeecCCccEecHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhCCc
Confidence 44442 45667778899999999999999998 4566777777763 367888888888776543
Q ss_pred CCCCCcEEEEEEeC
Q 045213 262 GSSDNITCVVVRFE 275 (281)
Q Consensus 262 g~~DNiTvivv~~~ 275 (281)
...||+|+|++++.
T Consensus 353 ~~~DDiTll~lk~~ 366 (367)
T COG2208 353 IQDDDITLLVLKVK 366 (367)
T ss_pred cccCceEEEEEEec
Confidence 35688999999975
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=85.36 E-value=6.9 Score=33.99 Aligned_cols=93 Identities=8% Similarity=0.018 Sum_probs=49.3
Q ss_pred CceEEEEEec--CCChhHH-HHHHHHH-HHHHHhcCCCchHhHHHHHHHHHHHHHHHHHhhhhcCCCCCCccEEEEEEe-
Q 045213 56 QKVAFFGVYD--GHGGSRT-SEYLRNH-LFKNLSSHPDFIEDTKTAIVEVFTNTDENYLSEEKGQQGDTGSTASTAVLL- 130 (281)
Q Consensus 56 ~~~~~~~V~D--G~GG~~~-a~~a~~~-~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~i~- 130 (281)
++...|.++| |||++.+ +...... +...+...............+.+..+|+.+....... -.|+..++++
T Consensus 161 ~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~p~~~l~~lN~~l~~~~~~~----~~t~~~~~~d~ 236 (303)
T PRK10693 161 DNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPG----QFPLLVGYYHR 236 (303)
T ss_pred CCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHhcCCCc----eeeEEEEEEEc
Confidence 3446777777 7775543 3333333 3334433210000000013455566777666552221 1477777775
Q ss_pred -CCeEEEEecCCceEEEEeCCcc
Q 045213 131 -GDRLVVANVGDSRVVASRAGSA 152 (281)
Q Consensus 131 -~~~~~~a~vGDsr~~l~r~~~~ 152 (281)
.+++.+++.|-...++..++.+
T Consensus 237 ~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 237 ELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred CCCeEEEEeCCCCCEEecCCeEE
Confidence 4689999999999885444433
No 21
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=59.58 E-value=6 Score=26.33 Aligned_cols=20 Identities=20% Similarity=0.209 Sum_probs=15.8
Q ss_pred CCeEEEEEcCCCccCCCHHH
Q 045213 217 GIDFIIVASDGLWNVISNEE 236 (281)
Q Consensus 217 ~~d~lil~SDGv~d~l~~~e 236 (281)
.|..+++++||+|=-+...-
T Consensus 26 ~G~Rllva~nGv~lEv~r~W 45 (72)
T PF09436_consen 26 PGHRLLVASNGVFLEVRRPW 45 (72)
T ss_pred CCcEEEEecCcEEEEEechH
Confidence 49999999999996554443
No 22
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=56.53 E-value=8.3 Score=27.18 Aligned_cols=52 Identities=19% Similarity=0.305 Sum_probs=33.9
Q ss_pred EecCCeEEEEEcCCCccCCCHHHHHHHHHccCCHHHHHHHHHHHHHhcCCCCCcE
Q 045213 214 EIDGIDFIIVASDGLWNVISNEEAVAMVEHITDAEAASRKLITDAYARGSSDNIT 268 (281)
Q Consensus 214 ~l~~~d~lil~SDGv~d~l~~~ei~~~~~~~~~~~~~a~~l~~~a~~~g~~DNiT 268 (281)
-+.++|-++|+.|||+-.+...+..+-++.. | ..+=.|-+...+||-.+.++
T Consensus 21 ~l~~~D~vlL~qdGV~aAl~~~~~~~sl~~~--p-~~~~alkeDl~ARGl~~~~s 72 (96)
T COG2168 21 LLTEGDAVLLLQDGVYAALKGNRYLASLRES--P-IKVYALKEDLLARGLTGQIS 72 (96)
T ss_pred HhcccCeEEEEcccchhhhcCcHHHHHHhcC--c-cceeeehhhHHhccchhhcC
Confidence 4567999999999999998888777766653 2 12223334445566444443
No 23
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=36.53 E-value=73 Score=25.48 Aligned_cols=47 Identities=26% Similarity=0.359 Sum_probs=32.7
Q ss_pred cCCeEEEEEcCCCcc-----------CCCHHHHHHHHHcc----CCHHHHHHHHHHHHHhcC
Q 045213 216 DGIDFIIVASDGLWN-----------VISNEEAVAMVEHI----TDAEAASRKLITDAYARG 262 (281)
Q Consensus 216 ~~~d~lil~SDGv~d-----------~l~~~ei~~~~~~~----~~~~~~a~~l~~~a~~~g 262 (281)
.-+|.++..|.|+|. +|....+=+.+.+. .-|.+.|++|++.-.++|
T Consensus 69 DIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 69 DIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred ccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 346899999999984 34444444444332 458999999999877775
No 24
>cd08325 CARD_CASP1-like Caspase activation and recruitment domain found in Caspase-1 and related proteins. Caspase activation and recruitment domain (CARD) similar to those found in Caspase-1 (CASP1, ICE) and related proteins, including CARD-only proteins such as ICEBERG or CARD18, INCA (CARD17), CARD16 (COP1, PSEUDO-ICE), CARD8 (DACAR, NDPP1, TUCAN), and CARD12 (NLRC4), as well as ICE-like caspases such as CASP12, CASP5 (ICH-3) and CASP4 (TX, ICH-2). Caspases are aspartate-specific cysteine proteases with functions in apoptosis and immune signaling. CASP1 plays a central role in the cellular response to a wide variety of microbial and non-microbial stimuli, being activated by the inflammasome or the pyroptosome. CARD8 binds itself and the initiator caspase-9, interfering with the binding of APAF-1 and suppressing caspase-9 activation. CARD12 is a Nod-like receptor (NLR) that plays an important role in the innate immune response to Gram-negative bacteria. Caspase-4 (CASP4), -5 (CASP5),
Probab=26.05 E-value=1.6e+02 Score=20.11 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=26.0
Q ss_pred cCCCHHHHHHHHHccCCHHHHHHHHHHHHHhcC
Q 045213 230 NVISNEEAVAMVEHITDAEAASRKLITDAYARG 262 (281)
Q Consensus 230 d~l~~~ei~~~~~~~~~~~~~a~~l~~~a~~~g 262 (281)
+.++.+|+..+-.......+-|+.|++....+|
T Consensus 29 ~Vl~~~E~e~i~~~~~t~~dkar~Lid~v~~KG 61 (83)
T cd08325 29 NVLNEEEMEKIKEENNTIMDKARVLVDSVTEKG 61 (83)
T ss_pred CCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHh
Confidence 357788888887766668889999999887765
No 25
>PF04077 DsrH: DsrH like protein; InterPro: IPR007215 The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulphur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulphide moiety, delivered by the cysteine desulphurase IscS to TusA, then to TusBCD. The activated sulphur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulphur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulphur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulphur flux, such as oxidation from sulphide to molecular sulphur to sulphate [].; GO: 0002143 tRNA wobble position uridine thiolation, 0005737 cytoplasm; PDB: 2HYB_O 2HY5_C 1X9A_A 1RHX_A 2D1P_C.
Probab=25.92 E-value=15 Score=25.52 Aligned_cols=28 Identities=14% Similarity=0.385 Sum_probs=18.7
Q ss_pred ecCCeEEEEEcCCCccCCCHHHHHHHHH
Q 045213 215 IDGIDFIIVASDGLWNVISNEEAVAMVE 242 (281)
Q Consensus 215 l~~~d~lil~SDGv~d~l~~~ei~~~~~ 242 (281)
+.++|.|+|.-|||+-.+........+.
T Consensus 16 ~~~~D~ilLiqDgV~~a~~~~~~~~~l~ 43 (88)
T PF04077_consen 16 LSEGDAILLIQDGVYAALKGSPYFKLLQ 43 (88)
T ss_dssp --TT-EEEE-GGGGGGGBTTSTTHHHHH
T ss_pred cCCCCEEEeeHHHHHHHhcCCHHHHHHh
Confidence 3568999999999998887665555543
No 26
>cd00534 DHNA_DHNTPE Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is DHNA which catalyses the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate. Though it is known that DHNTPE catalyzes the epimerization of dihydroneopterin triphosphate to dihydromonapterin triphosphate, the biological role of this enzyme is still unclear. It is hypothesized that it is not an essential protein since a folX knockout in E. coli has a normal phenoty
Probab=25.56 E-value=2.4e+02 Score=20.39 Aligned_cols=54 Identities=13% Similarity=0.201 Sum_probs=34.8
Q ss_pred EEcCCCccCCCHHHHHHHHHc------cCCHHHHHHHHHHHHHhcCCCCCcEEEEEEeCCCC
Q 045213 223 VASDGLWNVISNEEAVAMVEH------ITDAEAASRKLITDAYARGSSDNITCVVVRFENSR 278 (281)
Q Consensus 223 l~SDGv~d~l~~~ei~~~~~~------~~~~~~~a~~l~~~a~~~g~~DNiTvivv~~~~~~ 278 (281)
-.||-+-+.++...+.+.+.+ ....+.+|+.|.+..+... +.+.-+-+++.++.
T Consensus 42 ~~~D~l~~tidY~~l~~~i~~~~~~~~~~llE~La~~ia~~i~~~~--~~v~~v~v~v~K~~ 101 (118)
T cd00534 42 GESDDLADTLNYAEVAKLIKKIVEGSPFKLIETLAEEIADILLEDY--PKVSAIKVKVEKPN 101 (118)
T ss_pred hccCChhhccCHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHhC--CCceEEEEEEECCC
Confidence 357888888887777666543 2457788889888887762 33444444544443
No 27
>PRK03982 heat shock protein HtpX; Provisional
Probab=24.75 E-value=78 Score=27.27 Aligned_cols=29 Identities=17% Similarity=0.468 Sum_probs=23.7
Q ss_pred ecCCeEEEEEcCCCccCCCHHHHHHHHHc
Q 045213 215 IDGIDFIIVASDGLWNVISNEEAVAMVEH 243 (281)
Q Consensus 215 l~~~d~lil~SDGv~d~l~~~ei~~~~~~ 243 (281)
..+.+..|..|||+.+.++++|+..++..
T Consensus 103 ~~~~~~~V~vt~gLl~~l~~~El~AVlAH 131 (288)
T PRK03982 103 RDPKHAVVAVTEGILNLLNEDELEGVIAH 131 (288)
T ss_pred cCCCCeEEEeehHHHhhCCHHHHHHHHHH
Confidence 34456778899999999999999888754
No 28
>PRK02391 heat shock protein HtpX; Provisional
Probab=24.41 E-value=66 Score=27.92 Aligned_cols=28 Identities=18% Similarity=0.356 Sum_probs=23.6
Q ss_pred cCCeEEEEEcCCCccCCCHHHHHHHHHc
Q 045213 216 DGIDFIIVASDGLWNVISNEEAVAMVEH 243 (281)
Q Consensus 216 ~~~d~lil~SDGv~d~l~~~ei~~~~~~ 243 (281)
.+...+|+.|||+.+.++++|+..++..
T Consensus 112 ~~~~~~V~vt~gLl~~L~~~El~aVlaH 139 (296)
T PRK02391 112 SPKNAVVCVTTGLMRRLDPDELEAVLAH 139 (296)
T ss_pred CCCCcEEEecHHHHhhCCHHHHHHHHHH
Confidence 4456788999999999999999888754
No 29
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=23.80 E-value=1.2e+02 Score=15.64 Aligned_cols=21 Identities=33% Similarity=0.341 Sum_probs=16.2
Q ss_pred EEEeCCeEEEEecCCceEEEE
Q 045213 127 AVLLGDRLVVANVGDSRVVAS 147 (281)
Q Consensus 127 ~~i~~~~~~~a~vGDsr~~l~ 147 (281)
++-.++.+|++-.|..|+..+
T Consensus 8 av~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 8 AVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEETTSEEEEEECCCTEEEEE
T ss_pred EEeCCCCEEEEECCCCEEEEC
Confidence 333778999999999888654
No 30
>PRK05457 heat shock protein HtpX; Provisional
Probab=23.19 E-value=87 Score=26.98 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=27.2
Q ss_pred CceeEEEecCCeEEEEEcCCCccCCCHHHHHHHHHc
Q 045213 208 PEIQEEEIDGIDFIIVASDGLWNVISNEEAVAMVEH 243 (281)
Q Consensus 208 p~~~~~~l~~~d~lil~SDGv~d~l~~~ei~~~~~~ 243 (281)
|.-...-..+...+|+.|+|+.+.++++|+..++..
T Consensus 105 ~NAfa~G~~~~~~~V~vt~gLl~~L~~~El~aVlAH 140 (284)
T PRK05457 105 INAFATGASKNNSLVAVSTGLLQNMSRDEVEAVLAH 140 (284)
T ss_pred ceEEEecCCCCCeEEEeehHHhhhCCHHHHHHHHHH
Confidence 333333444567899999999999999999888754
No 31
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=22.89 E-value=1.4e+02 Score=19.09 Aligned_cols=25 Identities=32% Similarity=0.437 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHc-cCCHHHHHHHHHH
Q 045213 232 ISNEEAVAMVEH-ITDAEAASRKLIT 256 (281)
Q Consensus 232 l~~~ei~~~~~~-~~~~~~~a~~l~~ 256 (281)
.+++||..++.+ .-||.+++++|+.
T Consensus 19 hse~eIya~L~ecnMDpnea~qrLL~ 44 (60)
T PF06972_consen 19 HSEEEIYAMLKECNMDPNEAVQRLLS 44 (60)
T ss_pred CCHHHHHHHHHHhCCCHHHHHHHHHh
Confidence 578899888876 4789999999886
No 32
>COG1539 FolB Dihydroneopterin aldolase [Coenzyme metabolism]
Probab=22.86 E-value=3.2e+02 Score=20.19 Aligned_cols=55 Identities=18% Similarity=0.245 Sum_probs=38.9
Q ss_pred EEcCCCccCCCHHHHHHHHHcc------CCHHHHHHHHHHHHHhcCCCCCcEEEEEEeCCCCC
Q 045213 223 VASDGLWNVISNEEAVAMVEHI------TDAEAASRKLITDAYARGSSDNITCVVVRFENSRS 279 (281)
Q Consensus 223 l~SDGv~d~l~~~ei~~~~~~~------~~~~~~a~~l~~~a~~~g~~DNiTvivv~~~~~~~ 279 (281)
..||=+-|.++..++.+.+++. .-.+.+|+.+.+....+- ..++.+-+++.++..
T Consensus 43 ~~~Ddl~dtl~Y~~v~~~i~~~v~~~~~~LiE~lA~~ia~~l~~~~--~~v~~~~v~v~KP~a 103 (121)
T COG1539 43 AESDDLADTLNYAEVSELIKEIVEGKRFALIETLAEEIADLLLARF--PRVELVEVKVTKPKA 103 (121)
T ss_pred cCccchhheecHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHhhC--CccEEEEEEEECCCC
Confidence 3467788888888877766542 345777888888777654 677777777776654
No 33
>COG3315 O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.20 E-value=1.8e+02 Score=25.30 Aligned_cols=90 Identities=12% Similarity=0.056 Sum_probs=45.9
Q ss_pred CceEEEEeCCc-ccccCCCCCCCChhHHHHHHHcCCeEEeCCceeecCccccccccCCCCCccccccCCceeEEEecCCe
Q 045213 141 DSRVVASRAGS-AIPLSVDHKPDPADERQRIEDAGGFVIWAGTWRVGGVLPVSRAFGDKLLKQYVVAEPEIQEEEIDGID 219 (281)
Q Consensus 141 Dsr~~l~r~~~-~~~lt~dh~~~~~~e~~rl~~~gg~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~~~~~~l~~~d 219 (281)
|+|+|.+.+.. +.+...||....+.-.+.+.+.++.+.... ..+.-.+=+......+. ..-+.+..
T Consensus 104 DTRayRl~~~~~~~vfEvD~Pevi~~K~~~l~e~~~~~~~~~-------~~Va~Dl~~~dw~~~L~------~~G~d~~~ 170 (297)
T COG3315 104 DTRAYRLDWPKGTRVFEVDLPEVIEFKKKLLAERGATPPAHR-------RLVAVDLREDDWPQALA------AAGFDRSR 170 (297)
T ss_pred ccceeecCCCCCCeEEECCCcHHHHHHHHHhhhcCCCCCceE-------EEEeccccccchHHHHH------hcCCCcCC
Confidence 99999998885 888888887554333334444443321000 00000000000000000 00011223
Q ss_pred EEEEEcCCCccCCCHHHHHHHHHc
Q 045213 220 FIIVASDGLWNVISNEEAVAMVEH 243 (281)
Q Consensus 220 ~lil~SDGv~d~l~~~ei~~~~~~ 243 (281)
-.++-.-|+.-||+++++.+++..
T Consensus 171 pt~~iaEGLl~YL~~~~v~~ll~~ 194 (297)
T COG3315 171 PTLWIAEGLLMYLPEEAVDRLLSR 194 (297)
T ss_pred CeEEEeccccccCCHHHHHHHHHH
Confidence 345556799999999998877754
Done!