BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045214
(450 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 231 bits (588), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 168/261 (64%), Gaps = 7/261 (2%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y++ + LG+G+F KV A H TGQ V K + + +REIS +RL++HP+
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++++Y+V+ SK +I V+EYA G ELF V + K+ E AR++FQQ+ISA+++CH +
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDG-LLHTTCGTPAYVAPEVISRRGYD 189
HRDLKPENLLLDE+ +K+ DFGLS + DG L T+CG+P Y APEVIS + Y
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDP 249
G + D+WSCGVILYV+L LPF D ++ +++ I+ Y P + S L+ R+L
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 250
Query: 250 NPSTRISIAKIMENPWFRKGL 270
NP RISI +IM++ WF+ L
Sbjct: 251 NPLNRISIHEIMQDDWFKVDL 271
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 231 bits (588), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 168/261 (64%), Gaps = 7/261 (2%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y++ + LG+G+F KV A H TGQ V K + + +REIS +RL++HP+
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++++Y+V+ SK +I V+EYA G ELF V + K+ E AR++FQQ+ISA+++CH +
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDG-LLHTTCGTPAYVAPEVISRRGYD 189
HRDLKPENLLLDE+ +K+ DFGLS + DG L T+CG+P Y APEVIS + Y
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDP 249
G + D+WSCGVILYV+L LPF D ++ +++ I+ Y P + S L+ R+L
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 249
Query: 250 NPSTRISIAKIMENPWFRKGL 270
NP RISI +IM++ WF+ L
Sbjct: 250 NPLNRISIHEIMQDDWFKVDL 270
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 231 bits (588), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 168/261 (64%), Gaps = 7/261 (2%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y++ + LG+G+F KV A H TGQ V K + + +REIS +RL++HP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++++Y+V+ SK +I V+EYA G ELF V + K+ E AR++FQQ+ISA+++CH +
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDG-LLHTTCGTPAYVAPEVISRRGYD 189
HRDLKPENLLLDE+ +K+ DFGLS + DG L T+CG+P Y APEVIS + Y
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDP 249
G + D+WSCGVILYV+L LPF D ++ +++ I+ Y P + S L+ R+L
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 240
Query: 250 NPSTRISIAKIMENPWFRKGL 270
NP RISI +IM++ WF+ L
Sbjct: 241 NPLNRISIHEIMQDDWFKVDL 261
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 168/261 (64%), Gaps = 7/261 (2%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y++ + LG+G+F KV A H TGQ V K + + +REIS +RL++HP+
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++++Y+V+ SK +I V+EYA G ELF V + K+ E AR++FQQ+ISA+++CH +
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDG-LLHTTCGTPAYVAPEVISRRGYD 189
HRDLKPENLLLDE+ +K+ DFGLS + DG L T+CG+P Y APEVIS + Y
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDP 249
G + D+WSCGVILYV+L LPF D ++ +++ I+ Y P + S L+ R+L
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 244
Query: 250 NPSTRISIAKIMENPWFRKGL 270
NP RISI +IM++ WF+ L
Sbjct: 245 NPLNRISIHEIMQDDWFKVDL 265
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 116/270 (42%), Positives = 164/270 (60%), Gaps = 6/270 (2%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM 64
G+V + Y LG LG G F KV H TG V + +V + KREI +
Sbjct: 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 65 RLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAID 123
+L +HP+++++Y+V+++ T + VMEY GGELF + K G+++E AR+ FQQ++SA+D
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDG-LLHTTCGTPAYVAPEV 182
+CH V HRDLKPEN+LLD + K+ DFGLS + DG L T+CG+P Y APEV
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLRTSCGSPNYAAPEV 181
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
IS R Y G + DIWSCGVILY LL G LPF D ++ +++KI + P + + V L
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATL 241
Query: 243 LSRILDPNPSTRISIAKIMENPWFRKGLNS 272
L +L +P R +I I E+ WF++ L S
Sbjct: 242 LMHMLQVDPLKRATIKDIREHEWFKQDLPS 271
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/270 (42%), Positives = 163/270 (60%), Gaps = 6/270 (2%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM 64
G+V + Y LG LG G F KV H TG V + +V + KREI +
Sbjct: 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 65 RLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAID 123
+L +HP+++++Y+V+++ T + VMEY GGELF + K G+++E AR+ FQQ++SA+D
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDG-LLHTTCGTPAYVAPEV 182
+CH V HRDLKPEN+LLD + K+ DFGLS + DG L +CG+P Y APEV
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLRDSCGSPNYAAPEV 181
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
IS R Y G + DIWSCGVILY LL G LPF D ++ +++KI + P + + V L
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATL 241
Query: 243 LSRILDPNPSTRISIAKIMENPWFRKGLNS 272
L +L +P R +I I E+ WF++ L S
Sbjct: 242 LMHMLQVDPLKRATIKDIREHEWFKQDLPS 271
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 171/296 (57%), Gaps = 11/296 (3%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM 64
G+V + Y LG LG G F KV +H TG V + +V + +REI +
Sbjct: 11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNL 70
Query: 65 RLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAID 123
+L +HP+++++Y+V+++ + I+ VMEY GGELF + K G+L E +R+ FQQ++S +D
Sbjct: 71 KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVD 130
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDG-LLHTTCGTPAYVAPEV 182
+CH V HRDLKPEN+LLD + K+ DFGLS + DG L +CG+P Y APEV
Sbjct: 131 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----SDGEFLRXSCGSPNYAAPEV 186
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
IS R Y G + DIWS GVILY LL G LPF D ++ +++KI + P + + V L
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISL 246
Query: 243 LSRILDPNPSTRISIAKIMENPWFRKGL-----NSKSAKSKTAIKESSLVDVDAAF 293
L +L +P R +I I E+ WF++ L + S T I + +L +V F
Sbjct: 247 LKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKF 302
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 109/261 (41%), Positives = 163/261 (62%), Gaps = 7/261 (2%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y + LG+G+F KV A H T Q V K + + +REIS ++L++HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++++Y+V+ + T I V+EYA GGELF V K ++ ED R++FQQ+I AI++CH +
Sbjct: 71 IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDG-LLHTTCGTPAYVAPEVISRRGYD 189
HRDLKPENLLLD+N +K+ DFGLS + DG L T+CG+P Y APEVI+ + Y
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMT----DGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDP 249
G + D+WSCG++LYV+L G LPF D + +++K+ Y P + S + L+ R++
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVA 245
Query: 250 NPSTRISIAKIMENPWFRKGL 270
+P RI+I +I +PWF L
Sbjct: 246 DPMQRITIQEIRRDPWFNVNL 266
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/265 (41%), Positives = 162/265 (61%), Gaps = 4/265 (1%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
L++ YEL +G G FAKV A H+ TG+ V + + K EI ++ +
Sbjct: 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNL 65
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAIDFCH 126
+H ++ Q+Y V+ + KI+ V+EY GGELF + S+ +L E+ R F+Q++SA+ + H
Sbjct: 66 RHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S+G HRDLKPENLL DE LK+ DFGL A K ++D L T CG+ AY APE+I +
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK-GNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRI 246
Y G +AD+WS G++LYVL+ G+LPF D N+MA+Y+KI + Y P W S LL ++
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQM 244
Query: 247 LDPNPSTRISIAKIMENPWFRKGLN 271
L +P RIS+ ++ +PW + N
Sbjct: 245 LQVDPKKRISMKNLLNHPWIMQDYN 269
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 218 bits (554), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 162/269 (60%), Gaps = 25/269 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----------REI 61
Y L + +G+GNFAKV ARH+ TG+ V + ++D+T+ RE+
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVA-----------IKIIDKTQLNPTSLQKLFREV 62
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLIS 120
+M+++ HPN+++++EV+ ++ +Y +MEYA GGE+F V+ G++KE AR F+Q++S
Sbjct: 63 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 122
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
A+ +CH + + HRDLK ENLLLD + +K+ DFG S G L T CG+P Y AP
Sbjct: 123 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV---GGKLDTFCGSPPYAAP 179
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E+ + YDG + D+WS GVILY L++G LPF NL + ++ + Y+ P + S D
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 239
Query: 241 KLLSRILDPNPSTRISIAKIMENPWFRKG 269
LL R L NP R ++ +IM++ W G
Sbjct: 240 NLLKRFLVLNPIKRGTLEQIMKDRWINAG 268
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 164/269 (60%), Gaps = 25/269 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----------REI 61
Y L + +G+GNFAKV ARH+ TG+ V V ++D+T+ RE+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVA-----------VKIIDKTQLNSSSLQKLFREV 64
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLIS 120
+M+++ HPN+++++EV+ ++ +Y VMEYA GGE+F V+ G++KE AR F+Q++S
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
A+ +CH + + HRDLK ENLLLD + +K+ DFG S ++ L T CG+P Y AP
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAP 181
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E+ + YDG + D+WS GVILY L++G LPF NL + ++ + Y+ P + S D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 241 KLLSRILDPNPSTRISIAKIMENPWFRKG 269
LL + L NPS R ++ +IM++ W G
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVG 270
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 164/269 (60%), Gaps = 25/269 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----------REI 61
Y L + +G+GNFAKV ARH+ TG+ V V ++D+T+ RE+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVA-----------VKIIDKTQLNSSSLQKLFREV 64
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLIS 120
+M+++ HPN+++++EV+ ++ +Y VMEYA GGE+F V+ G++KE AR F+Q++S
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
A+ +CH + + HRDLK ENLLLD + +K+ DFG S ++ L T CG+P Y AP
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAP 181
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E+ + YDG + D+WS GVILY L++G LPF NL + ++ + Y+ P + S D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 241 KLLSRILDPNPSTRISIAKIMENPWFRKG 269
LL + L NPS R ++ +IM++ W G
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVG 270
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 164/269 (60%), Gaps = 25/269 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----------REI 61
Y L + +G+GNFAKV ARH+ TG+ V V ++D+T+ RE+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVA-----------VRIIDKTQLNSSSLQKLFREV 64
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLIS 120
+M+++ HPN+++++EV+ ++ +Y VMEYA GGE+F V+ G++KE AR F+Q++S
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
A+ +CH + + HRDLK ENLLLD + +K+ DFG S ++ L T CG+P Y AP
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAP 181
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E+ + YDG + D+WS GVILY L++G LPF NL + ++ + Y+ P + S D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 241 KLLSRILDPNPSTRISIAKIMENPWFRKG 269
LL + L NPS R ++ +IM++ W G
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVG 270
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 160/269 (59%), Gaps = 25/269 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----------REI 61
Y L + +G+GNFAKV ARH+ TG+ V + ++D+T+ RE+
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVA-----------IKIIDKTQLNPTSLQKLFREV 65
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLIS 120
+M+++ HPN+++++EV+ ++ +Y +MEYA GGE+F V+ G++KE AR F+Q++S
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 125
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
A+ +CH + + HRDLK ENLLLD + +K+ DFG S G L CG P Y AP
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV---GGKLDAFCGAPPYAAP 182
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E+ + YDG + D+WS GVILY L++G LPF NL + ++ + Y+ P + S D
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 242
Query: 241 KLLSRILDPNPSTRISIAKIMENPWFRKG 269
LL R L NP R ++ +IM++ W G
Sbjct: 243 NLLKRFLVLNPIKRGTLEQIMKDRWINAG 271
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 162/269 (60%), Gaps = 25/269 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----------REI 61
Y L + +G+GNFAKV ARH+ TG+ V V ++D+T+ RE+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVA-----------VKIIDKTQLNSSSLQKLFREV 64
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLIS 120
+M+++ HPN+++++EV+ ++ +Y VMEYA GGE+F V+ G++KE AR F+Q++S
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
A+ +CH + + HRDLK ENLLLD + +K+ DFG S ++ L CG P Y AP
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAP 181
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E+ + YDG + D+WS GVILY L++G LPF NL + ++ + Y+ P + S D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 241 KLLSRILDPNPSTRISIAKIMENPWFRKG 269
LL + L NPS R ++ +IM++ W G
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVG 270
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 163/269 (60%), Gaps = 25/269 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----------REI 61
Y L + +G+GNFAKV ARH+ TG+ V V ++D+T+ RE+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVA-----------VRIIDKTQLNSSSLQKLFREV 64
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLIS 120
+M+++ HPN+++++EV+ ++ +Y VMEYA GGE+F V+ G++KE AR F+Q++S
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
A+ +CH + + HRDLK ENLLLD + +K+ DFG S ++ L CG+P Y AP
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAP 181
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E+ + YDG + D+WS GVILY L++G LPF NL + ++ + Y+ P + S D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 241 KLLSRILDPNPSTRISIAKIMENPWFRKG 269
LL + L NPS R ++ +IM++ W G
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVG 270
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 163/269 (60%), Gaps = 25/269 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----------REI 61
Y L + +G+GNFAKV ARH+ TG+ V V ++D+T+ RE+
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVA-----------VKIIDKTQLNSSSLQKLFREV 57
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLIS 120
+M+++ HPN+++++EV+ ++ +Y VMEYA GGE+F V+ G +KE AR F+Q++S
Sbjct: 58 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS 117
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
A+ +CH + + HRDLK ENLLLD + +K+ DFG S ++ L T CG+P Y AP
Sbjct: 118 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDTFCGSPPYAAP 174
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E+ + YDG + D+WS GVILY L++G LPF NL + ++ + Y+ P + S D
Sbjct: 175 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 234
Query: 241 KLLSRILDPNPSTRISIAKIMENPWFRKG 269
LL + L NPS R ++ +IM++ W G
Sbjct: 235 NLLKKFLILNPSKRGTLEQIMKDRWMNVG 263
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 167/279 (59%), Gaps = 25/279 (8%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----------REI 61
Y L + +G+GNFAKV ARH+ TG+ V V ++D+T+ RE+
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVA-----------VKIIDKTQLNPTSLQKLFREV 65
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLIS 120
+M+++ HPN+++++EV+ ++ +Y VMEYA GGE+F V+ G++KE AR F+Q++S
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 125
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
A+ +CH + + HRDLK ENLLLD + +K+ DFG S ++ L T CG+P Y AP
Sbjct: 126 AVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK---LDTFCGSPPYAAP 182
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E+ + YDG + D+WS GVILY L++G LPF NL + ++ + Y+ P + S D
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 242
Query: 241 KLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKT 279
LL ++L NP R S+ +IM++ W G + K T
Sbjct: 243 NLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYT 281
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 158/269 (58%), Gaps = 25/269 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----------REI 61
Y L + +G+GNFAKV ARH+ TG+ V V ++D+T+ RE+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVA-----------VKIIDKTQLNSSSLQKLFREV 64
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLIS 120
+ +++ HPN+++++EV+ ++ +Y V EYA GGE+F V+ G+ KE AR F+Q++S
Sbjct: 65 RIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS 124
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
A+ +CH + + HRDLK ENLLLD + +K+ DFG S ++ L CG P Y AP
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAP 181
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E+ + YDG + D+WS GVILY L++G LPF NL + ++ + Y+ P + S D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCE 241
Query: 241 KLLSRILDPNPSTRISIAKIMENPWFRKG 269
LL + L NPS R ++ +I ++ W G
Sbjct: 242 NLLKKFLILNPSKRGTLEQIXKDRWXNVG 270
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 158/291 (54%), Gaps = 24/291 (8%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
+YEL + +G GNF R + + V + + KREI R ++HP
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLRHP 74
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRG 129
N+++ EV+ + T + VMEYA GGELF+++ G+ ED AR +FQQLIS + +CH+
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 130 VYHRDLKPENLLLDENGM--LKVTDFGLSALAKCKHQDGLLHT----TCGTPAYVAPEVI 183
V HRDLK EN LLD + LK+ DFG S + +LH+ T GTPAY+APEV+
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVL 187
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRK----IAKADYKFPTW--FSA 237
++ YDG AD+WSCGV LYV+L G PF D +RK I Y P + S
Sbjct: 188 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 247
Query: 238 DVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAIKESSLVD 288
+ R L+SRI +P+ RISI +I + WF K L + T + + D
Sbjct: 248 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFAASD 298
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 154/266 (57%), Gaps = 6/266 (2%)
Query: 3 TKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS 62
+K + ++ +++GR LG+G F VY AR + + K G+ Q +RE+
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 63 VMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISA 121
+ ++HPN++++Y T++Y ++EYA G +++++ K + E Y +L +A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 122 IDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
+ +CHS+ V HRD+KPENLLL NG LK+ DFG S A +D T CGT Y+ PE
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPE 180
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRK 241
+I R +D +K D+WS GV+ Y L G PF YR+I++ ++ FP + + R
Sbjct: 181 MIEGRMHD-EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARD 239
Query: 242 LLSRILDPNPSTRISIAKIMENPWFR 267
L+SR+L N S R+++A+++E+PW +
Sbjct: 240 LISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 155/282 (54%), Gaps = 24/282 (8%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
+YEL + +G GNF R + + V + + KREI R ++HP
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANV----KREIINHRSLRHP 75
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRG 129
N+++ EV+ + T + VMEYA GGELF+++ G+ ED AR +FQQLIS + +CH+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 130 VYHRDLKPENLLLDENGM--LKVTDFGLSALAKCKHQDGLLHT----TCGTPAYVAPEVI 183
V HRDLK EN LLD + LK+ DFG S + +LH+ T GTPAY+APEV+
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRK----IAKADYKFPTW--FSA 237
++ YDG AD+WSCGV LYV+L G PF D +RK I Y P + S
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 238 DVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKT 279
+ R L+SRI +P+ RISI +I + WF K L + T
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNT 290
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 153/267 (57%), Gaps = 7/267 (2%)
Query: 1 METKGKVL-MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR 59
ME+K + ++ +E+GR LG+G F VY AR + + K G+ Q +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQL 118
E+ + ++HPN++++Y T++Y ++EYA GE++K++ K K E Y +L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
+A+ +CHS+ V HRD+KPENLLL G LK+ DFG S A + T CGT Y+
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 178
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
PE+I R +D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + +
Sbjct: 179 PPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 237
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R L+SR+L NPS R + +++E+PW
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 153/266 (57%), Gaps = 6/266 (2%)
Query: 3 TKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS 62
+K + ++ +++GR LG+G F VY AR + + K G+ Q +RE+
Sbjct: 5 SKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 63 VMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISA 121
+ ++HPN++++Y T++Y ++EYA G +++++ K + E Y +L +A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 122 IDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
+ +CHS+ V HRD+KPENLLL NG LK+ DFG S A + T CGT Y+ PE
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPE 180
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRK 241
+I R +D +K D+WS GV+ Y L G PF YR+I++ ++ FP + + R
Sbjct: 181 MIEGRMHD-EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARD 239
Query: 242 LLSRILDPNPSTRISIAKIMENPWFR 267
L+SR+L N S R+++A+++E+PW +
Sbjct: 240 LISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 154/282 (54%), Gaps = 24/282 (8%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
+YEL + +G GNF R + + V + + KREI R ++HP
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLRHP 75
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRG 129
N+++ EV+ + T + VMEYA GGELF+++ G+ ED AR +FQQLIS + +CH+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 130 VYHRDLKPENLLLDENGM--LKVTDFGLSALAKCKHQDGLLHT----TCGTPAYVAPEVI 183
V HRDLK EN LLD + LK+ FG S + +LH+ T GTPAY+APEV+
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYS-------KSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRK----IAKADYKFPTW--FSA 237
++ YDG AD+WSCGV LYV+L G PF D +RK I Y P + S
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 238 DVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKT 279
+ R L+SRI +P+ RISI +I + WF K L + T
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNT 290
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 154/282 (54%), Gaps = 24/282 (8%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
+YEL + +G GNF R + + V + + KREI R ++HP
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLRHP 75
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRG 129
N+++ EV+ + T + VMEYA GGELF+++ G+ ED AR +FQQLIS + +CH+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 130 VYHRDLKPENLLLDENGM--LKVTDFGLSALAKCKHQDGLLHT----TCGTPAYVAPEVI 183
V HRDLK EN LLD + LK+ FG S + +LH+ T GTPAY+APEV+
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYS-------KSSVLHSQPKDTVGTPAYIAPEVL 188
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRK----IAKADYKFPTW--FSA 237
++ YDG AD+WSCGV LYV+L G PF D +RK I Y P + S
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 238 DVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKT 279
+ R L+SRI +P+ RISI +I + WF K L + T
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNT 290
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 148/258 (57%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A +D L CGT Y+ PE+I R
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL----CGTLDYLPPEMIEGRM 208
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 209 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 267
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 268 KHNPSQRPMLREVLEHPW 285
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 148/258 (57%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A +D T CGT Y+ PE+I R
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRM 183
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 184 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 242
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 243 KHNPSQRPMLREVLEHPW 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 148/258 (57%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A +D L CGT Y+ PE+I R
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL----CGTLDYLPPEMIEGRM 185
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 186 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 244
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 245 KHNPSQRPMLREVLEHPW 262
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 151/278 (54%), Gaps = 16/278 (5%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
+YEL + +G GNF R + V + + KREI R ++HP
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKID----ENVKREIINHRSLRHP 75
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAIDFCHSRG 129
N+++ EV+ + T + VMEYA GGELF+++ + G+ ED AR +FQQLIS + + H+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 130 VYHRDLKPENLLLDENGM--LKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
V HRDLK EN LLD + LK+ DFG S + Q + GTPAY+APEV+ ++
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP---KSAVGTPAYIAPEVLLKKE 192
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRK----IAKADYKFPTW--FSADVRK 241
YDG AD+WSCGV LYV+L G PF D +RK I Y P + S + R
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 242 LLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKT 279
L+SRI +P+ RISI +I + WF K L + T
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNT 290
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 150/266 (56%), Gaps = 6/266 (2%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
M K + ++ +E+GR LG+G F VY AR + + K G+ Q +RE
Sbjct: 4 MSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 61 ISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLI 119
+ + ++HPN++++Y T++Y ++EYA G +++++ K K E Y +L
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 120 SAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
+A+ +CHS+ V HRD+KPENLLL G LK+ DFG S A + L CGT Y+
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYLP 179
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADV 239
PE+I R +D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + +
Sbjct: 180 PEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 240 RKLLSRILDPNPSTRISIAKIMENPW 265
R L+SR+L NPS R + +++E+PW
Sbjct: 239 RDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 151/266 (56%), Gaps = 6/266 (2%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
M +K + ++ +E+GR LG+G F VY AR + + K G+ Q +RE
Sbjct: 3 MGSKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 62
Query: 61 ISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLI 119
+ + ++HPN++++Y T++Y ++EYA G +++++ K K E Y +L
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 122
Query: 120 SAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
+A+ +CHS+ V HRD+KPENLLL G LK+ DFG S A + T CGT Y+
Sbjct: 123 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLP 178
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADV 239
PE+I R +D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + +
Sbjct: 179 PEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 237
Query: 240 RKLLSRILDPNPSTRISIAKIMENPW 265
R L+SR+L NPS R + +++E+PW
Sbjct: 238 RDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 152/267 (56%), Gaps = 7/267 (2%)
Query: 1 METKGKVL-MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR 59
ME+K + ++ +E+GR LG+G F VY AR + + K G+ Q +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQL 118
E+ + ++HPN++++Y T++Y ++EYA G +++++ K K E Y +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
+A+ +CHS+ V HRD+KPENLLL G LK+ DFG S A + T CGT Y+
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 176
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
PE+I R +D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + +
Sbjct: 177 PPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R L+SR+L NPS R + +++E+PW
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + T CGT Y+ PE+I R
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRM 199
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 200 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 258
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 259 KHNPSQRPMLREVLEHPW 276
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 152/267 (56%), Gaps = 7/267 (2%)
Query: 1 METKGKVL-MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR 59
ME+K + ++ +E+GR LG+G F VY AR + + K G+ Q +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQL 118
E+ + ++HPN++++Y T++Y ++EYA G +++++ K K E Y +L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
+A+ +CHS+ V HRD+KPENLLL G LK+ DFG S A + T CGT Y+
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 178
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
PE+I R +D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + +
Sbjct: 179 PPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 237
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R L+SR+L NPS R + +++E+PW
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + T CGT Y+ PE+I R
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRM 208
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 209 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 267
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 268 KHNPSQRPMLREVLEHPW 285
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 146/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + T CGT Y+ PE I R
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEXIEGRX 187
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 188 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 246
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 247 KHNPSQRPXLREVLEHPW 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 152/267 (56%), Gaps = 7/267 (2%)
Query: 1 METKGKVL-MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR 59
ME+K + ++ +E+GR LG+G F VY AR + + K G+ Q +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQL 118
E+ + ++HPN++++Y T++Y ++EYA G +++++ K K E Y +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
+A+ +CHS+ V HRD+KPENLLL G LK+ DFG S A + T CGT Y+
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYL 176
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
PE+I R +D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + +
Sbjct: 177 PPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R L+SR+L NPS R + +++E+PW
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + L CGT Y+ PE+I R
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL----CGTLDYLPPEMIEGRM 182
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 183 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLL 241
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 242 KHNPSQRPMLREVLEHPW 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + T CGT Y+ PE+I R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRM 182
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 183 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 242 KHNPSQRPMLREVLEHPW 259
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 151/273 (55%), Gaps = 24/273 (8%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
+Y+ + +G GNF R T + V + + +REI R ++HP
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQREIINHRSLRHP 76
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRG 129
N+++ EV+ + T + +MEYA GGEL++++ G+ ED AR +FQQL+S + +CHS
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 130 VYHRDLKPENLLLDENGM--LKVTDFGLSALAKCKHQDGLLHT----TCGTPAYVAPEVI 183
+ HRDLK EN LLD + LK+ DFG S + +LH+ T GTPAY+APEV+
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVL 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRK----IAKADYKFP--TWFSA 237
R+ YDG AD+WSCGV LYV+L G PF D YRK I Y P S
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISP 249
Query: 238 DVRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+SRI +P+TRISI +I + WF K L
Sbjct: 250 ECCHLISRIFVADPATRISIPEIKTHSWFLKNL 282
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + L CGT Y+ PE+I R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL----CGTLDYLPPEMIEGRM 182
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 183 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 242 KHNPSQRPMLREVLEHPW 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + L CGT Y+ PE+I R
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL----CGTLDYLPPEMIEGRM 185
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 186 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 244
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 245 KHNPSQRPMLREVLEHPW 262
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 152/267 (56%), Gaps = 7/267 (2%)
Query: 1 METKGKVL-MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR 59
ME+K + ++ +E+GR LG+G F VY AR + + K G+ Q +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQL 118
E+ + ++HPN++++Y T++Y ++EYA G +++++ K K E Y +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
+A+ +CHS+ V HRD+KPENLLL G LK+ DFG S A + L CGT Y+
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL----CGTLDYL 176
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
PE+I R +D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + +
Sbjct: 177 PPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R L+SR+L NPS R + +++E+PW
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + L CGT Y+ PE+I R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYLPPEMIEGRM 182
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 183 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 242 KHNPSQRPMLREVLEHPW 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + T CGT Y+ PE+I R
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRM 181
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 182 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 240
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 241 KHNPSQRPMLREVLEHPW 258
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + L CGT Y+ PE+I R
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYLPPEMIEGRM 183
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 184 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 242
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 243 KHNPSQRPMLREVLEHPW 260
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 152/267 (56%), Gaps = 7/267 (2%)
Query: 1 METKGKVL-MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR 59
ME+K + ++ +E+GR LG+G F VY AR + + K G+ Q +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQL 118
E+ + ++HPN++++Y T++Y ++EYA GE++K++ K K E Y +L
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
+A+ +CHS+ V HRD+KPENLLL G LK+ DFG S A + L GT Y+
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX----GTLDYL 178
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
PE+I R +D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + +
Sbjct: 179 PPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 237
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R L+SR+L NPS R + +++E+PW
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + L CGT Y+ PE+I R
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL----CGTLDYLPPEMIEGRM 184
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 185 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 243
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 244 KHNPSQRPMLREVLEHPW 261
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 154/278 (55%), Gaps = 9/278 (3%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + L CGT Y+ PE+I R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYLPPEMIEGRM 182
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 183 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
Query: 248 DPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAIKESS 285
NPS R + +++E+PW + S S KES+
Sbjct: 242 KHNPSQRPMLREVLEHPWITA---NSSKPSNCQNKESA 276
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + L CGT Y+ PE+I R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL----CGTLDYLPPEMIEGRM 182
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 183 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 242 KHNPSQRPMLREVLEHPW 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 187 bits (476), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + L CGT Y+ PE+I R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL----CGTLDYLPPEMIEGRM 182
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 183 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 242 KHNPSQRPMLREVLEHPW 259
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 152/267 (56%), Gaps = 7/267 (2%)
Query: 1 METKGKVL-MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR 59
ME+K + ++ +E+GR LG+G F VY AR + + K G+ Q +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQL 118
E+ + ++HPN++++Y T++Y ++EYA G +++++ K K E Y +L
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
+A+ +CHS+ V HRD+KPENLLL G LK+ +FG S A + T CGT Y+
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT----TLCGTLDYL 176
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
PE+I R +D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + +
Sbjct: 177 PPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 235
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R L+SR+L NPS R + +++E+PW
Sbjct: 236 ARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + L CGT Y+ PE+I R
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL----CGTLDYLPPEMIEGRM 182
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 183 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 242 KHNPSQRPMLREVLEHPW 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ +FG S A + T CGT Y+ PE+I R
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRM 184
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 185 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 243
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 244 KHNPSQRPMLREVLEHPW 261
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 146/258 (56%), Gaps = 6/258 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + K G+ Q +RE+ + ++
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S A + T CGT Y+ PE+I R
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRM 179
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 180 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 238
Query: 248 DPNPSTRISIAKIMENPW 265
NPS R + +++E+PW
Sbjct: 239 KHNPSQRPMLREVLEHPW 256
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 154/279 (55%), Gaps = 8/279 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +E+GR LG+G F VY AR + + K G+ Q +RE+ + ++
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
HPN++++Y T++Y ++EYA G +++++ K K E Y +L +A+ +CHS
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ V HRD+KPENLLL G LK+ DFG S C T GT Y+ PE+I R
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWS----CHAPSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+D +K D+WS GV+ Y L G PF + Y++I++ ++ FP + + R L+SR+L
Sbjct: 184 HD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 242
Query: 248 DPNPSTRISIAKIMENPWFRKGLN--SKSAKSKTAIKES 284
NPS R + +++E+PW + S S ++A K+S
Sbjct: 243 KHNPSQRPMLREVLEHPWITANSSKPSNSQNKESASKQS 281
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 158/269 (58%), Gaps = 12/269 (4%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
K +Q +++ R LG G+F +V+ R G+ +++ V+ T E ++
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDF 124
++ HP +++++ +I+ +M+Y +GGELF + K + A+ Y ++ A+++
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS+ + +RDLKPEN+LLD+NG +K+TDFG + K+ + + CGTP Y+APEV+S
Sbjct: 122 LHSKDIIYRDLKPENILLDKNGHIKITDFGFA-----KYVPDVTYXLCGTPDYIAPEVVS 176
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
+ Y+ D WS G+++Y +LAGY PF+DSN M Y KI A+ +FP +F+ DV+ LLS
Sbjct: 177 TKPYN-KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLS 235
Query: 245 RILDPNPSTRI-----SIAKIMENPWFRK 268
R++ + S R+ + +PWF++
Sbjct: 236 RLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 155/269 (57%), Gaps = 7/269 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++ +++G LLG+G+FA VY A + TG V K G+V + + E+ + ++
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLK---EDTARKYFQQLISAIDFC 125
HP+++++Y +Y V+E GE+ + K ++K E+ AR + Q+I+ + +
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISR 185
HS G+ HRDL NLLL N +K+ DFGL+ K H+ +T CGTP Y++PE+ +R
Sbjct: 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH--YTLCGTPNYISPEIATR 186
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSR 245
+ G ++D+WS G + Y LL G PF + K+ ADY+ P++ S + + L+ +
Sbjct: 187 SAH-GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQ 245
Query: 246 ILDPNPSTRISIAKIMENPWFRKGLNSKS 274
+L NP+ R+S++ ++++P+ + ++KS
Sbjct: 246 LLRRNPADRLSLSSVLDHPFMSRNSSTKS 274
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 146/265 (55%), Gaps = 6/265 (2%)
Query: 4 KGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISV 63
K K + +++GR LG+G F VY AR + K G+ Q +REI +
Sbjct: 8 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 64 MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAI 122
++HPN++++Y + +IY ++E+A GEL+K++ K G+ E + + ++L A+
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEV 182
+CH R V HRD+KPENLL+ G LK+ DFG S A + + CGT Y+ PE+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEM 183
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
I + +D +K D+W GV+ Y L G PF + +R+I D KFP + S + L
Sbjct: 184 IEGKTHD-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDL 242
Query: 243 LSRILDPNPSTRISIAKIMENPWFR 267
+S++L +P R+ + +ME+PW +
Sbjct: 243 ISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 146/265 (55%), Gaps = 6/265 (2%)
Query: 4 KGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISV 63
K K + +++GR LG+G F VY AR + K G+ Q +REI +
Sbjct: 9 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 68
Query: 64 MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAI 122
++HPN++++Y + +IY ++E+A GEL+K++ K G+ E + + ++L A+
Sbjct: 69 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 128
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEV 182
+CH R V HRD+KPENLL+ G LK+ DFG S A + + CGT Y+ PE+
Sbjct: 129 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEM 184
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
I + +D +K D+W GV+ Y L G PF + +R+I D KFP + S + L
Sbjct: 185 IEGKTHD-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDL 243
Query: 243 LSRILDPNPSTRISIAKIMENPWFR 267
+S++L +P R+ + +ME+PW +
Sbjct: 244 ISKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 145/265 (54%), Gaps = 6/265 (2%)
Query: 4 KGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISV 63
K K + +++ R LG+G F VY AR + K G+ Q +REI +
Sbjct: 8 KRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 64 MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAI 122
++HPN++++Y + +IY ++E+A GEL+K++ K G+ E + + ++L A+
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEV 182
+CH R V HRD+KPENLL+ G LK+ DFG S A + + CGT Y+ PE+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEM 183
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
I + +D +K D+W GV+ Y L G PF + +R+I D KFP + S + L
Sbjct: 184 IEGKTHD-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDL 242
Query: 243 LSRILDPNPSTRISIAKIMENPWFR 267
+S++L +P R+ + +ME+PW +
Sbjct: 243 ISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 148/272 (54%), Gaps = 8/272 (2%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
+E+GR LG+G F VY AR + V K G+ Q +REI + + HPN
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCHSRGV 130
++++Y + +IY ++EYA GEL+K++ K E ++L A+ +CH + V
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKV 144
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
HRD+KPENLLL G LK+ DFG S A + T CGT Y+ PE+I R ++
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK----TMCGTLDYLPPEMIEGRMHN- 199
Query: 191 DKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPN 250
+K D+W GV+ Y LL G PF ++ YR+I K D KFP + L+S++L N
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHN 259
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKSKTAIK 282
PS R+ +A++ +PW R NS+ +A++
Sbjct: 260 PSERLPLAQVSAHPWVRA--NSRRVLPPSALQ 289
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 144/258 (55%), Gaps = 16/258 (6%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQI 75
+LG G F++V+ + TG+ + ++ EI+V++ I+H N++ +
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKKIKHENIVTL 71
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAIDFCHSRGVYHRD 134
++ S T Y VM+ GGELF ++ +G E A QQ++SA+ + H G+ HRD
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRD 131
Query: 135 LKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGD 191
LKPENLL +EN + +TDFGLS + Q+G++ T CGTP YVAPEV++++ Y
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPY-SK 186
Query: 192 KADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSADVRKLLSRIL 247
D WS GVI Y+LL GY PF++ ++ KI + Y+F P W S + + +L
Sbjct: 187 AVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLL 246
Query: 248 DPNPSTRISIAKIMENPW 265
+ +P+ R + K + +PW
Sbjct: 247 EKDPNERYTCEKALSHPW 264
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+ +LG G F++V A T Q + L+ G + EI+V+ I+HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRT-QKLVAIKCIAKEALE-GKEGSMENEIAVLHKIKHPN 77
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++ + ++ S +Y +M+ GGELF + V KG E A + Q++ A+ + H G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 131 YHRDLKPENLL---LDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
HRDLKPENLL LDE+ + ++DFGLS K + +L T CGTP YVAPEV++++
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSADVRKLL 243
Y D WS GVI Y+LL GY PF+D N ++ +I KA+Y+F P W S + +
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 244 SRILDPNPSTRISIAKIMENPW 265
+++ +P R + + +++PW
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPW 275
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 147/263 (55%), Gaps = 14/263 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+ +LG G F++V A T Q + L+ G + EI+V+ I+HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRT-QKLVAIKCIAKEALE-GKEGSMENEIAVLHKIKHPN 77
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++ + ++ S +Y +M+ GGELF + V KG E A + Q++ A+ + H G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 131 YHRDLKPENLL---LDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
HRDLKPENLL LDE+ + ++DFGLS K + +L T CGTP YVAPEV++++
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSADVRKLL 243
Y D WS GVI Y+LL GY PF+D N ++ +I KA+Y+F P W S + +
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 244 SRILDPNPSTRISIAKIMENPWF 266
+++ +P R + + +++PW
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+ +LG G F++V A T Q + L+ G + EI+V+ I+HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRT-QKLVAIKCIAKEALE-GKEGSMENEIAVLHKIKHPN 77
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++ + ++ S +Y +M+ GGELF + V KG E A + Q++ A+ + H G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 131 YHRDLKPENLL---LDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
HRDLKPENLL LDE+ + ++DFGLS K + +L T CGTP YVAPEV++++
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSADVRKLL 243
Y D WS GVI Y+LL GY PF+D N ++ +I KA+Y+F P W S + +
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 244 SRILDPNPSTRISIAKIMENPW 265
+++ +P R + + +++PW
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPW 275
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 147/263 (55%), Gaps = 14/263 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+ +LG G F++V A T Q + L+ G + EI+V+ I+HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRT-QKLVAIKCIAKKALE-GKEGSMENEIAVLHKIKHPN 77
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++ + ++ S +Y +M+ GGELF + V KG E A + Q++ A+ + H G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 131 YHRDLKPENLL---LDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
HRDLKPENLL LDE+ + ++DFGLS K + +L T CGTP YVAPEV++++
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLS---KMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSADVRKLL 243
Y D WS GVI Y+LL GY PF+D N ++ +I KA+Y+F P W S + +
Sbjct: 195 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 244 SRILDPNPSTRISIAKIMENPWF 266
+++ +P R + + +++PW
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 145/262 (55%), Gaps = 14/262 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
+E LG G F++V A TG+ + LK G + EI+V+R I+H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGK-LFAVKCIPKKALK-GKESSIENEIAVLRKIKHEN 81
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++ + ++ S +Y VM+ GGELF + V KG E A +Q++ A+ + H G+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 131 YHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
HRDLKPENLL DE + ++DFGLS K + + ++ T CGTP YVAPEV++++
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLS---KMEGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSADVRKLL 243
Y D WS GVI Y+LL GY PF+D N ++ +I KA+Y+F P W S + +
Sbjct: 199 Y-SKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFI 257
Query: 244 SRILDPNPSTRISIAKIMENPW 265
+++ +P+ R + + +PW
Sbjct: 258 RNLMEKDPNKRYTCEQAARHPW 279
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 162/307 (52%), Gaps = 14/307 (4%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRK--LL 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKT---AIKESSL-----VDVDAAFGP 295
+IL NPS RI+I I ++ W+ K L + + + + ES + + F P
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSP 301
Query: 296 IENSAST 302
+ +++ T
Sbjct: 302 VNSASRT 308
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 162/307 (52%), Gaps = 14/307 (4%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 62
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRK--LL 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKT---AIKESSL-----VDVDAAFGP 295
+IL NPS RI+I I ++ W+ K L + + + + ES + + F P
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSP 302
Query: 296 IENSAST 302
+ +++ T
Sbjct: 303 VNSASRT 309
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 135/223 (60%), Gaps = 8/223 (3%)
Query: 52 GLVDQTKREISVMRLIQHPNVMQIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKED 109
G ++Q +EI++++ + HPNV+++ EV+ ++ +Y V E G + + + L ED
Sbjct: 78 GPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED 137
Query: 110 TARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLH 169
AR YFQ LI I++ H + + HRD+KP NLL+ E+G +K+ DFG+S + K D LL
Sbjct: 138 QARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS--NEFKGSDALLS 195
Query: 170 TTCGTPAYVAPEVIS--RRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKA 227
T GTPA++APE +S R+ + G D+W+ GV LY + G PF D +M ++ KI
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQ 255
Query: 228 DYKFPTW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
+FP + D++ L++R+LD NP +RI + +I +PW +
Sbjct: 256 ALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 150/277 (54%), Gaps = 6/277 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRKL--L 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D L L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+IL NPS RI+I I ++ W+ K L + + +
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 150/277 (54%), Gaps = 6/277 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 62
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRKL--L 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D L L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+IL NPS RI+I I ++ W+ K L + + +
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 279
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 150/277 (54%), Gaps = 6/277 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 62
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRKL--L 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D L L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+IL NPS RI+I I ++ W+ K L + + +
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 279
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 150/277 (54%), Gaps = 6/277 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 60
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRKL--L 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D L L
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 240
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+IL NPS RI+I I ++ W+ K L + + +
Sbjct: 241 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 277
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 150/277 (54%), Gaps = 6/277 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 62
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRKL--L 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D L L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+IL NPS RI+I I ++ W+ K L + + +
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 279
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 150/277 (54%), Gaps = 6/277 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEIXINKML 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRKL--L 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D L L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+IL NPS RI+I I ++ W+ K L + + +
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 150/273 (54%), Gaps = 7/273 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRK--LL 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAK 276
+IL NPS RI+I I ++ W+ K L K AK
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPL-KKGAK 273
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 147/267 (55%), Gaps = 6/267 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRK--LL 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGL 270
+IL NPS RI+I I ++ W+ K L
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 150/273 (54%), Gaps = 7/273 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 62
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRK--LL 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAK 276
+IL NPS RI+I I ++ W+ K L K AK
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPL-KKGAK 274
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 147/267 (55%), Gaps = 6/267 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRK--LL 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGL 270
+IL NPS RI+I I ++ W+ K L
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 147/267 (55%), Gaps = 6/267 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRK--LL 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGL 270
+IL NPS RI+I I ++ W+ K L
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 147/267 (55%), Gaps = 6/267 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 62
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRK--LL 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGL 270
+IL NPS RI+I I ++ W+ K L
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 149/277 (53%), Gaps = 6/277 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G +V A + T ++V V + K+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRKL--L 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D L L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+IL NPS RI+I I ++ W+ K L + + +
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 148/278 (53%), Gaps = 17/278 (6%)
Query: 3 TKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS 62
TKG + Q Y L +G+G++ +V A GT V VD+ K+EI
Sbjct: 20 TKGDI-NQYYTLENTIGRGSWGEVKIAVQKGTR---IRRAAKKIPKYFVEDVDRFKQEIE 75
Query: 63 VMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISA 121
+M+ + HPN++++YE T IY VME GGELF++ V K +E A + + ++SA
Sbjct: 76 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 135
Query: 122 IDFCHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
+ +CH V HRDLKPEN L + LK+ DFGL+A K ++ T GTP YV
Sbjct: 136 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK---PGKMMRTKVGTPYYV 192
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--WF- 235
+P+V+ G G + D WS GV++YVLL GY PF + KI + + FP W
Sbjct: 193 SPQVLE--GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN 250
Query: 236 -SADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNS 272
S L+ R+L +P RI+ + +E+ WF K L+S
Sbjct: 251 VSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSS 288
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 143/264 (54%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEYA GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENL++D+ G +KVTDFGL+ K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 148/278 (53%), Gaps = 17/278 (6%)
Query: 3 TKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS 62
TKG + Q Y L +G+G++ +V A GT V VD+ K+EI
Sbjct: 3 TKGDI-NQYYTLENTIGRGSWGEVKIAVQKGTR---IRRAAKKIPKYFVEDVDRFKQEIE 58
Query: 63 VMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISA 121
+M+ + HPN++++YE T IY VME GGELF++ V K +E A + + ++SA
Sbjct: 59 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 118
Query: 122 IDFCHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
+ +CH V HRDLKPEN L + LK+ DFGL+A K ++ T GTP YV
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK---PGKMMRTKVGTPYYV 175
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--WF- 235
+P+V+ G G + D WS GV++YVLL GY PF + KI + + FP W
Sbjct: 176 SPQVLE--GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN 233
Query: 236 -SADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNS 272
S L+ R+L +P RI+ + +E+ WF K L+S
Sbjct: 234 VSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSS 271
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 146/267 (54%), Gaps = 6/267 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + ++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINAML 62
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ CGT YVAPE++ RR
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRK--LL 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGL 270
+IL NPS RI+I I ++ W+ K L
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPL 269
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 142/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G T CGTP Y+APE+I +G
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWTLCGTPEYLAPEIILSKG 215
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 143/264 (54%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEYA GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENL++D+ G ++VTDFGL+ K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 142/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEYA GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENL++D+ G +KVTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 142/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G T CGTP Y+APE+I +G
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWTLCGTPEYLAPEIILSKG 200
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 201 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 259
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 260 QVDLTKRFGNLKDGVNDIKNHKWF 283
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 142/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEYA GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENL++D+ G +KVTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P + ++ + +Y VMEYA GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENL++D+ G +KVTDFG + K G CGTP Y+APE+I +G
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 215
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P + ++ + +Y VMEYA GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENL++D+ G +KVTDFG + K G CGTP Y+APE+I +G
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 215
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P + ++ + +Y VMEYA GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENL++D+ G +KVTDFG + K G CGTP Y+APE+I +G
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 215
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 154/288 (53%), Gaps = 14/288 (4%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y + +LG+G+F +V + T Q K RE+ +++ + H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDH 80
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSR 128
PN+M+++E++ + Y V E GGELF ++ K K E A + +Q+ S I + H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 129 GVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISR 185
+ HRDLKPEN+LL +++ +K+ DFGLS C Q+ + GT Y+APEV+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLST---CFQQNTKMKDRIGTAYYIAPEVL-- 195
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSADVRK 241
RG +K D+WS GVILY+LL+G PF+ N + +++ Y F P W S D +
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255
Query: 242 LLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
L+ ++L +PS RI+ + +E+PW +K + S ES++ ++
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNI 303
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 142/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEYA GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENL++D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 149/277 (53%), Gaps = 6/277 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ GT YVAPE++ RR
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRKL--L 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D L L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+IL NPS RI+I I ++ W+ K L + + +
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 149/277 (53%), Gaps = 6/277 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ GT YVAPE++ RR
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRKL--L 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D L L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+IL NPS RI+I I ++ W+ K L + + +
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 149/277 (53%), Gaps = 6/277 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEIXINKML 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ GT YVAPE++ RR
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRKL--L 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D L L
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+IL NPS RI+I I ++ W+ K L + + +
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVT 278
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H TG +K+ ++ T E +++ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEYA GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENL++D+ G +KVTDFG + K G CGTP Y+APE+I +G
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 215
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 152/272 (55%), Gaps = 15/272 (5%)
Query: 4 KGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISV 63
+ KV M ++ +LLG+G F KV R TG+ + V T E V
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 64 MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAI 122
++ +HP + + + ++ FVMEYA GGELF +S+ ++ E+ AR Y +++SA+
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 121
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH--QDG-LLHTTCGTPAYVA 179
++ HSR V +RD+K ENL+LD++G +K+TDFGL CK DG + T CGTP Y+A
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKTFCGTPEYLA 176
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADV 239
PEV+ Y G D W GV++Y ++ G LPF++ + ++ I + +FP S +
Sbjct: 177 PEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA 235
Query: 240 RKLLSRILDPNPSTRI----SIAK-IMENPWF 266
+ LL+ +L +P R+ S AK +ME+ +F
Sbjct: 236 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 150/269 (55%), Gaps = 16/269 (5%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMR 65
+ +Y+L LG+G F+ V + TGQ K+ D K RE + R
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTK---KLSARDHQKLEREARICR 58
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDF 124
L++HPN++++++ ++ + Y V + GGELF+ V++ E A QQ++ +++
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 125 CHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
CH G+ HRDLKPENLLL + +K+ DFGL+ + Q GTP Y++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPE 176
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--W--FSA 237
V+ + Y G D+W+CGVILY+LL GY PF D + +Y++I Y FP+ W +
Sbjct: 177 VLRKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP 235
Query: 238 DVRKLLSRILDPNPSTRISIAKIMENPWF 266
+ + L++++L NP+ RI+ ++ +++PW
Sbjct: 236 EAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 215
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 215
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 149/273 (54%), Gaps = 7/273 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEIXINKML 62
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ GT YVAPE++ RR
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRK--LL 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D LL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 242
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGLNSKSAK 276
+IL NPS RI+I I ++ W+ K L K AK
Sbjct: 243 HKILVENPSARITIPDIKKDRWYNKPL-KKGAK 274
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 150/269 (55%), Gaps = 16/269 (5%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMR 65
+ +Y+L LG+G F+ V + TGQ K+ D K RE + R
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTK---KLSARDHQKLEREARICR 58
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDF 124
L++HPN++++++ ++ + Y V + GGELF+ V++ E A QQ++ +++
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 125 CHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
CH G+ HRDLKPENLLL + +K+ DFGL+ + Q GTP Y++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPE 176
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--W--FSA 237
V+ + Y G D+W+CGVILY+LL GY PF D + +Y++I Y FP+ W +
Sbjct: 177 VLRKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP 235
Query: 238 DVRKLLSRILDPNPSTRISIAKIMENPWF 266
+ + L++++L NP+ RI+ ++ +++PW
Sbjct: 236 EAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 146/267 (54%), Gaps = 6/267 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++ ++L + LG+G + +V A + T ++V V + K+EI + +++
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKML 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCH 126
H NV++ Y Y +EY GGELF ++ + E A+++F QL++ + + H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KPENLLLDE LK++DFGL+ + + +++ LL+ GT YVAPE++ RR
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSADVRK--LL 243
+ + D+WSCG++L +LAG LP+ S+ Y + W D LL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL 241
Query: 244 SRILDPNPSTRISIAKIMENPWFRKGL 270
+IL NPS RI+I I ++ W+ K L
Sbjct: 242 HKILVENPSARITIPDIKKDRWYNKPL 268
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 171/326 (52%), Gaps = 19/326 (5%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
KV M ++ +LLG+G F KV R TG+ + V T E V++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAIDF 124
+HP + + + ++ FVMEYA GGELF +S+ ++ E+ AR Y +++SA+++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH--QDG-LLHTTCGTPAYVAPE 181
HSR V +RD+K ENL+LD++G +K+TDFGL CK DG + T CGTP Y+APE
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKTFCGTPEYLAPE 175
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRK 241
V+ Y G D W GV++Y ++ G LPF++ + ++ I + +FP S + +
Sbjct: 176 VLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 242 LLSRILDPNPSTRI----SIAK-IMENPWFRKGLNSKSAKSKTAI---KESSLVDVDAAF 293
LL+ +L +P R+ S AK +ME+ +F +N + K + K +VD +
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL-SINWQDVVQKKLLPPFKPQVTSEVDTRY 293
Query: 294 GPIENSASTEAPRPMTKPDNLNAFHI 319
E +A + P + D+L +
Sbjct: 294 FDDEFTAQSITITPPDRYDSLGLLEL 319
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 151/270 (55%), Gaps = 15/270 (5%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
KV M ++ +LLG+G F KV R TG+ + V T E V++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAIDF 124
+HP + + + ++ FVMEYA GGELF +S+ ++ E+ AR Y +++SA+++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH--QDG-LLHTTCGTPAYVAPE 181
HSR V +RD+K ENL+LD++G +K+TDFGL CK DG + T CGTP Y+APE
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKTFCGTPEYLAPE 175
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRK 241
V+ Y G D W GV++Y ++ G LPF++ + ++ I + +FP S + +
Sbjct: 176 VLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 242 LLSRILDPNPSTRI----SIAK-IMENPWF 266
LL+ +L +P R+ S AK +ME+ +F
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 144/249 (57%), Gaps = 17/249 (6%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQ 117
E++V++L+ HPN+M++Y+ K Y VME KGGELF + + + K E A +Q
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQ 144
Query: 118 LISAIDFCHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGT 174
++S + + H + HRDLKPENLLL +++ ++K+ DFGLSA+ + + + + GT
Sbjct: 145 VLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK---MKERLGT 201
Query: 175 PAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--P 232
Y+APEV+ R+ YD +K D+WS GVIL++LLAGY PF + RK+ K Y F P
Sbjct: 202 AYYIAPEVL-RKKYD-EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSP 259
Query: 233 TW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAIKESSLVDVD 290
W S + L+ ++L + RIS + +E+PW ++ +K ++ I+ SL +
Sbjct: 260 EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE----MCSKKESGIELPSLANAI 315
Query: 291 AAFGPIENS 299
+NS
Sbjct: 316 ENMRKFQNS 324
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 147/265 (55%), Gaps = 16/265 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQH 69
Y+L LG+G F+ V + GQ K+ D K RE + RL++H
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTK---KLSARDHQKLEREARICRLLKH 80
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSR 128
PN++++++ ++ + Y + + GGELF+ V++ E A QQ++ A+ CH
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 129 GVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISR 185
GV HRDLKPENLLL + +K+ DFGL+ + + Q GTP Y++PEV+ +
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF--GFAGTPGYLSPEVLRK 198
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--W--FSADVRK 241
Y G D+W+CGVILY+LL GY PF D + +Y++I Y FP+ W + + +
Sbjct: 199 DPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 257
Query: 242 LLSRILDPNPSTRISIAKIMENPWF 266
L++++L NPS RI+ A+ +++PW
Sbjct: 258 LINKMLTINPSKRITAAEALKHPWI 282
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H TG +K+ ++ T E +++ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 215
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 275 QVDLTKRFGNLKNGVNDIXNHKWF 298
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y + +LG+G+F +V + T Q K RE+ +++ + H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDH 80
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSR 128
PN+M+++E++ + Y V E GGELF ++ K K E A + +Q+ S I + H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 129 GVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISR 185
+ HRDLKPEN+LL +++ +K+ DFGLS C Q+ + GT Y+APEV+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLST---CFQQNTKMKDRIGTAYYIAPEVL-- 195
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSADVRK 241
RG +K D+WS GVILY+LL+G PF+ N + +++ Y F P W S D +
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255
Query: 242 LLSRILDPNPSTRISIAKIMENPWFRK 268
L+ ++L +PS RI+ + +E+PW +K
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 146/267 (54%), Gaps = 14/267 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y + +LG+G+F +V + T Q K RE+ +++ + H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDH 80
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSR 128
PN+M+++E++ + Y V E GGELF ++ K K E A + +Q+ S I + H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 129 GVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISR 185
+ HRDLKPEN+LL +++ +K+ DFGLS C Q+ + GT Y+APEV+
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLST---CFQQNTKMKDRIGTAYYIAPEVL-- 195
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSADVRK 241
RG +K D+WS GVILY+LL+G PF+ N + +++ Y F P W S D +
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD 255
Query: 242 LLSRILDPNPSTRISIAKIMENPWFRK 268
L+ ++L +PS RI+ + +E+PW +K
Sbjct: 256 LIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H TG +K+ ++ T E +++ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 215
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + +G G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G +KV DFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 149/269 (55%), Gaps = 16/269 (5%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMR 65
++Y+L LG+G F+ V + GQ K+ D K RE + R
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTK---KLSARDHQKLEREARICR 65
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDF 124
L++HPN++++++ ++ + Y + + GGELF+ V++ E A QQ++ A+
Sbjct: 66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 125
Query: 125 CHSRGVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
CH GV HR+LKPENLLL + +K+ DFGL+ + + Q GTP Y++PE
Sbjct: 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF--GFAGTPGYLSPE 183
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--W--FSA 237
V+ + Y G D+W+CGVILY+LL GY PF D + +Y++I Y FP+ W +
Sbjct: 184 VLRKDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP 242
Query: 238 DVRKLLSRILDPNPSTRISIAKIMENPWF 266
+ + L++++L NPS RI+ A+ +++PW
Sbjct: 243 EAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H TG +K+ ++ T E +++ +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 207
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 208 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 266
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 267 QVDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H TG +K+ ++ T E +++ +
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 207
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 208 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 266
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 267 QVDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 139/264 (52%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E R LG G+F +V +H TG +K+ ++ T E + + +
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y V+EYA GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G +KV DFG + K G CGTP Y+APE+I +G
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 215
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H TG +K+ ++ T E +++ +
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 215
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + LG G+F +V +H TG +K+ ++ T E +++ +
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 235
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 236 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 294
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 295 QVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 140/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + ++ GT YV+PE+++ +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS- 207
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 267
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 268 LDATKRLGCEEM 279
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 141/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G T CGTP Y+APE+I +G
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GATWTLCGTPEYLAPEIILSKG 235
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 236 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 294
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 295 QVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 140/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + ++ GT YV+PE+++ +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS- 211
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 271
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 272 LDATKRLGCEEM 283
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 170/326 (52%), Gaps = 19/326 (5%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
KV M ++ +LLG+G F KV R TG+ + V T E V++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAIDF 124
+HP + + + ++ FVMEYA GGELF +S+ ++ E+ AR Y +++SA+++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH--QDG-LLHTTCGTPAYVAPE 181
HSR V +RD+K ENL+LD++G +K+TDFGL CK DG + CGTP Y+APE
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKXFCGTPEYLAPE 175
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRK 241
V+ Y G D W GV++Y ++ G LPF++ + ++ I + +FP S + +
Sbjct: 176 VLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 242 LLSRILDPNPSTRI----SIAK-IMENPWFRKGLNSKSAKSKTAI---KESSLVDVDAAF 293
LL+ +L +P R+ S AK +ME+ +F +N + K + K +VD +
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL-SINWQDVVQKKLLPPFKPQVTSEVDTRY 293
Query: 294 GPIENSASTEAPRPMTKPDNLNAFHI 319
E +A + P + D+L +
Sbjct: 294 FDDEFTAQSITITPPDRYDSLGLLEL 319
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 213
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 214 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLV 273
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 274 LDATKRLGCEEM 285
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 170/326 (52%), Gaps = 19/326 (5%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
KV M ++ +LLG+G F KV R TG+ + V T E V++
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAIDF 124
+HP + + + ++ FVMEYA GGELF +S+ ++ E+ AR Y +++SA+++
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH--QDG-LLHTTCGTPAYVAPE 181
HSR V +RD+K ENL+LD++G +K+TDFGL CK DG + CGTP Y+APE
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKXFCGTPEYLAPE 180
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRK 241
V+ Y G D W GV++Y ++ G LPF++ + ++ I + +FP S + +
Sbjct: 181 VLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 239
Query: 242 LLSRILDPNPSTRI----SIAK-IMENPWFRKGLNSKSAKSKTAI---KESSLVDVDAAF 293
LL+ +L +P R+ S AK +ME+ +F +N + K + K +VD +
Sbjct: 240 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL-SINWQDVVQKKLLPPFKPQVTSEVDTRY 298
Query: 294 GPIENSASTEAPRPMTKPDNLNAFHI 319
E +A + P + D+L +
Sbjct: 299 FDDEFTAQSITITPPDRYDSLGLLEL 324
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKS- 208
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 268
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 269 LDATKRLGCEEM 280
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 187
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 188 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 247
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 248 LDATKRLGCEEM 259
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 185
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 186 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 245
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 246 LDATKRLGCEEM 257
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 170/326 (52%), Gaps = 19/326 (5%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
KV M ++ +LLG+G F KV R TG+ + V T E V++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAIDF 124
+HP + + + ++ FVMEYA GGELF +S+ ++ E+ AR Y +++SA+++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH--QDG-LLHTTCGTPAYVAPE 181
HSR V +RD+K ENL+LD++G +K+TDFGL CK DG + CGTP Y+APE
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKXFCGTPEYLAPE 175
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRK 241
V+ Y G D W GV++Y ++ G LPF++ + ++ I + +FP S + +
Sbjct: 176 VLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 242 LLSRILDPNPSTRI----SIAK-IMENPWFRKGLNSKSAKSKTAI---KESSLVDVDAAF 293
LL+ +L +P R+ S AK +ME+ +F +N + K + K +VD +
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL-SINWQDVVQKKLLPPFKPQVTSEVDTRY 293
Query: 294 GPIENSASTEAPRPMTKPDNLNAFHI 319
E +A + P + D+L +
Sbjct: 294 FDDEFTAQSITIXPPDRYDSLGLLEL 319
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 186
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 246
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 247 LDATKRLGCEEM 258
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 170/326 (52%), Gaps = 19/326 (5%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
KV M ++ +LLG+G F KV R TG+ + V T E V++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAIDF 124
+HP + + + ++ FVMEYA GGELF +S+ ++ E+ AR Y +++SA+++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH--QDG-LLHTTCGTPAYVAPE 181
HSR V +RD+K ENL+LD++G +K+TDFGL CK DG + CGTP Y+APE
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGL-----CKEGISDGATMKXFCGTPEYLAPE 175
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRK 241
V+ Y G D W GV++Y ++ G LPF++ + ++ I + +FP S + +
Sbjct: 176 VLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 242 LLSRILDPNPSTRI----SIAK-IMENPWFRKGLNSKSAKSKTAI---KESSLVDVDAAF 293
LL+ +L +P R+ S AK +ME+ +F +N + K + K +VD +
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL-SINWQDVVQKKLLPPFKPQVTSEVDTRY 293
Query: 294 GPIENSASTEAPRPMTKPDNLNAFHI 319
E +A + P + D+L +
Sbjct: 294 FDDEFTAQSITITPPDRYDSLGLLEL 319
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 208
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 268
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 269 LDATKRLGCEEM 280
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 188
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 189 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 248
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 249 LDATKRLGCEEM 260
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 208
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 268
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 269 LDATKRLGCEEM 280
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 192
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 193 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 252
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 253 LDATKRLGCEEM 264
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 211
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 271
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 272 LDATKRLGCEEM 283
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 210
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 271 LDATKRLGCEEM 282
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 210
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 271 LDATKRLGCEEM 282
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 210
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 271 LDATKRLGCEEM 282
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 207
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 267
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 268 LDATKRLGCEEM 279
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 215
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 216 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 275
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 276 LDATKRLGCEEM 287
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 143/274 (52%), Gaps = 13/274 (4%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
L +Y+ + LG G + +V + TG E++V++ +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCH 126
HPN+M++YE K Y VME +GGELF ++ + K E A +Q++S + H
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 127 SRGVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ HRDLKPENLLL+ + ++K+ DFGLSA + G + GT Y+APEV+
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV---GGKMKERLGTAYYIAPEVL 178
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSADV 239
R+ YD +K D+WSCGVILY+LL GY PF + +++ K + F P W S +
Sbjct: 179 -RKKYD-EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA 236
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFRKGLNSK 273
++L+ +L PS RIS + + +PW K + K
Sbjct: 237 KQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQK 270
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + +G G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GG++F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G +KV DFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+DE G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 201
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 202 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 260
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 261 QVDLTKRFGNLKNGVNDIKNHKWF 284
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ ++E + +G G+F +V +H+ TG +K+ ++ T E +++ +
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GG++F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G +KV DFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 151/273 (55%), Gaps = 16/273 (5%)
Query: 4 KGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISV 63
K +V M ++E +LLG+G F KV + TG+ + V T E V
Sbjct: 145 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 204
Query: 64 MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAI 122
++ +HP + + + ++ FVMEYA GGELF +S+ ++ ED AR Y +++SA+
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 264
Query: 123 DFCHS-RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH--QDG-LLHTTCGTPAYV 178
D+ HS + V +RDLK ENL+LD++G +K+TDFGL CK +DG + T CGTP Y+
Sbjct: 265 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKTFCGTPEYL 319
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APEV+ Y G D W GV++Y ++ G LPF++ + ++ I + +FP +
Sbjct: 320 APEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE 378
Query: 239 VRKLLSRILDPNPSTRIS-----IAKIMENPWF 266
+ LLS +L +P R+ +IM++ +F
Sbjct: 379 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 151/273 (55%), Gaps = 16/273 (5%)
Query: 4 KGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISV 63
K +V M ++E +LLG+G F KV + TG+ + V T E V
Sbjct: 142 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 201
Query: 64 MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAI 122
++ +HP + + + ++ FVMEYA GGELF +S+ ++ ED AR Y +++SA+
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 261
Query: 123 DFCHS-RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH--QDG-LLHTTCGTPAYV 178
D+ HS + V +RDLK ENL+LD++G +K+TDFGL CK +DG + T CGTP Y+
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKTFCGTPEYL 316
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APEV+ Y G D W GV++Y ++ G LPF++ + ++ I + +FP +
Sbjct: 317 APEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE 375
Query: 239 VRKLLSRILDPNPSTRIS-----IAKIMENPWF 266
+ LLS +L +P R+ +IM++ +F
Sbjct: 376 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 210
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N ++ KI K +Y FP F R L+ ++L
Sbjct: 211 AXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 271 LDATKRLGCEEM 282
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 215
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 216 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 274
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 275 QVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ AR L T + +K V RE VM + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 208
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 268
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 269 LDATKRLGCEEM 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 143/274 (52%), Gaps = 13/274 (4%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
L +Y+ + LG G + +V + TG E++V++ +
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCH 126
HPN+M++YE K Y VME +GGELF ++ + K E A +Q++S + H
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 127 SRGVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ HRDLKPENLLL+ + ++K+ DFGLSA + G + GT Y+APEV+
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV---GGKMKERLGTAYYIAPEVL 195
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSADV 239
R+ YD +K D+WSCGVILY+LL GY PF + +++ K + F P W S +
Sbjct: 196 -RKKYD-EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA 253
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFRKGLNSK 273
++L+ +L PS RIS + + +PW K + K
Sbjct: 254 KQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQK 287
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 209
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 210 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 268
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 269 QVDLTKRFGNLKNGVNDIKNHKWF 292
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 180
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 235
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 236 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 294
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 295 QVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 138/252 (54%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK GEL K + K G E R Y +++SA+++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + + GT YV+PE+++ +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS- 210
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N ++ KI K +Y FP F R L+ ++L
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 271 LDATKRLGCEEM 282
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLPNGVNDIKNHKWF 297
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ ++ G++LG+G+F+ V AR L T + +K V RE VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR 128
P +++Y K+YF + YAK G L K + K G E R Y +++SA+++ H +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ HRDLKPEN+LL+E+ +++TDFG + + + + ++ GT YV+PE+++ +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS- 210
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
+D+W+ G I+Y L+AG PF N +++KI K +Y FP F R L+ ++L
Sbjct: 211 ASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLV 270
Query: 249 PNPSTRISIAKI 260
+ + R+ ++
Sbjct: 271 LDATKRLGCEEM 282
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 140/264 (53%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENL++D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIIISKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 143/248 (57%), Gaps = 6/248 (2%)
Query: 11 KYELGRLLGQGNFAKVYYARHLG--TGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++EL ++LGQG+F KV+ + + + + LKV +TK E ++ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAIDFCHS 127
HP +++++ ++ K+Y ++++ +GG+LF ++SK + E+ + Y +L A+D HS
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
G+ +RDLKPEN+LLDE G +K+TDFGLS H+ ++ CGT Y+APEV++RRG
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKK-AYSFCGTVEYMAPEVVNRRG 202
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+ AD WS GV+++ +L G LPF + I KA P + S + + LL +
Sbjct: 203 HT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLF 261
Query: 248 DPNPSTRI 255
NP+ R+
Sbjct: 262 KRNPANRL 269
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 146/268 (54%), Gaps = 16/268 (5%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMR 65
+ +Y+L +G+G F+ V L TG K+ D K RE + R
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTK---KLSARDHQKLEREARICR 58
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDF 124
L++H N++++++ ++ + Y V + GGELF+ V++ E A QQ++ A+
Sbjct: 59 LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 125 CHSRGVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
CH GV HRDLKPENLLL + +K+ DFGL+ + Q GTP Y++PE
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPE 176
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--W--FSA 237
V+ + Y G DIW+CGVILY+LL GY PF D + +Y++I Y FP+ W +
Sbjct: 177 VLRKEAY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTP 235
Query: 238 DVRKLLSRILDPNPSTRISIAKIMENPW 265
+ + L++++L NP+ RI+ + +++PW
Sbjct: 236 EAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 143/248 (57%), Gaps = 6/248 (2%)
Query: 11 KYELGRLLGQGNFAKVYYARHLG--TGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++EL ++LGQG+F KV+ + + + + LKV +TK E ++ +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAIDFCHS 127
HP +++++ ++ K+Y ++++ +GG+LF ++SK + E+ + Y +L A+D HS
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
G+ +RDLKPEN+LLDE G +K+TDFGLS H+ ++ CGT Y+APEV++RRG
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKK-AYSFCGTVEYMAPEVVNRRG 203
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+ AD WS GV+++ +L G LPF + I KA P + S + + LL +
Sbjct: 204 HT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLF 262
Query: 248 DPNPSTRI 255
NP+ R+
Sbjct: 263 KRNPANRL 270
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 143/248 (57%), Gaps = 6/248 (2%)
Query: 11 KYELGRLLGQGNFAKVYYARHLG--TGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
++EL ++LGQG+F KV+ + + + + LKV +TK E ++ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAIDFCHS 127
HP +++++ ++ K+Y ++++ +GG+LF ++SK + E+ + Y +L A+D HS
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
G+ +RDLKPEN+LLDE G +K+TDFGLS H+ ++ CGT Y+APEV++RRG
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKK-AYSFCGTVEYMAPEVVNRRG 202
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+ AD WS GV+++ +L G LPF + I KA P + S + + LL +
Sbjct: 203 HT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLF 261
Query: 248 DPNPSTRI 255
NP+ R+
Sbjct: 262 KRNPANRL 269
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 144/263 (54%), Gaps = 18/263 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
+E+ LG+G + VY + GT + K+ + EI V+ + HPN
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI-----VRTEIGVLLRLSHPN 109
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++++ E+ + T+I V+E GGELF + V KG E A +Q++ A+ + H G+
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGI 169
Query: 131 YHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
HRDLKPENLL + LK+ DFGLS + +HQ L+ T CGTP Y APE++
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQ-VLMKTVCGTPGYCAPEILRGCA 226
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDS-NLMAMYRKIAKADYKF--PTW--FSADVRKL 242
Y G + D+WS G+I Y+LL G+ PF+D M+R+I +Y F P W S + + L
Sbjct: 227 Y-GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDL 285
Query: 243 LSRILDPNPSTRISIAKIMENPW 265
+ +++ +P R++ + +++PW
Sbjct: 286 VRKLIVLDPKKRLTTFQALQHPW 308
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 132/240 (55%), Gaps = 7/240 (2%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 139/264 (52%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP Y+AP +I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLAPAIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 149/272 (54%), Gaps = 16/272 (5%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM 64
+V M ++E +LLG+G F KV + TG+ + V T E V+
Sbjct: 4 ARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 63
Query: 65 RLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAID 123
+ +HP + + + ++ FVMEYA GGELF +S+ ++ ED AR Y +++SA+D
Sbjct: 64 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 123
Query: 124 FCHS-RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH--QDG-LLHTTCGTPAYVA 179
+ HS + V +RDLK ENL+LD++G +K+TDFGL CK +DG + CGTP Y+A
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKXFCGTPEYLA 178
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADV 239
PEV+ Y G D W GV++Y ++ G LPF++ + ++ I + +FP +
Sbjct: 179 PEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA 237
Query: 240 RKLLSRILDPNPSTRIS-----IAKIMENPWF 266
+ LLS +L +P R+ +IM++ +F
Sbjct: 238 KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 149/271 (54%), Gaps = 16/271 (5%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
+V M ++E +LLG+G F KV + TG+ + V T E V++
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAIDF 124
+HP + + + ++ FVMEYA GGELF +S+ ++ ED AR Y +++SA+D+
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 125 CHS-RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH--QDG-LLHTTCGTPAYVAP 180
HS + V +RDLK ENL+LD++G +K+TDFGL CK +DG + CGTP Y+AP
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKXFCGTPEYLAP 178
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
EV+ Y G D W GV++Y ++ G LPF++ + ++ I + +FP + +
Sbjct: 179 EVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 237
Query: 241 KLLSRILDPNPSTRIS-----IAKIMENPWF 266
LLS +L +P R+ +IM++ +F
Sbjct: 238 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 149/271 (54%), Gaps = 16/271 (5%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
+V M ++E +LLG+G F KV + TG+ + V T E V++
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAIDF 124
+HP + + + ++ FVMEYA GGELF +S+ ++ ED AR Y +++SA+D+
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 125 CHS-RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH--QDG-LLHTTCGTPAYVAP 180
HS + V +RDLK ENL+LD++G +K+TDFGL CK +DG + CGTP Y+AP
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGL-----CKEGIKDGATMKXFCGTPEYLAP 180
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
EV+ Y G D W GV++Y ++ G LPF++ + ++ I + +FP + +
Sbjct: 181 EVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 239
Query: 241 KLLSRILDPNPSTRIS-----IAKIMENPWF 266
LLS +L +P R+ +IM++ +F
Sbjct: 240 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 141/247 (57%), Gaps = 6/247 (2%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQS--VXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+EL ++LGQG+F KV+ R + S + LKV +TK E ++ + H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKL-KEDTARKYFQQLISAIDFCHSR 128
P V++++ ++ K+Y ++++ +GG+LF ++SK + E+ + Y +L +D HS
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL 149
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
G+ +RDLKPEN+LLDE G +K+TDFGLS A + ++ CGT Y+APEV++R+G+
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKA--YSFCGTVEYMAPEVVNRQGH 207
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
AD WS GV+++ +L G LPF + I KA P + S + + LL +
Sbjct: 208 -SHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFK 266
Query: 249 PNPSTRI 255
NP+ R+
Sbjct: 267 RNPANRL 273
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 13/269 (4%)
Query: 7 VLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRL 66
+ +Y+ R+LG+G+F +V + TGQ + + RE+ +++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 67 IQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAIDFC 125
+ HPN+M++YE K Y V E GGELF ++ S+ + E A + +Q++S I +
Sbjct: 83 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM 142
Query: 126 HSRGVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEV 182
H + HRDLKPENLLL+ ++ +++ DFGLS + + + GT Y+APEV
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEV 199
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSAD 238
+ G +K D+WS GVILY+LL+G PF+ +N + +K+ K Y F P W S
Sbjct: 200 L--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFR 267
+ L+ ++L PS RIS +++ W +
Sbjct: 258 AKDLIRKMLTYVPSMRISARDALDHEWIQ 286
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 139/264 (52%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G CGTP +APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEALAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 13/269 (4%)
Query: 7 VLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRL 66
+ +Y+ R+LG+G+F +V + TGQ + + RE+ +++
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 106
Query: 67 IQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAIDFC 125
+ HPN+M++YE K Y V E GGELF ++ S+ + E A + +Q++S I +
Sbjct: 107 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM 166
Query: 126 HSRGVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEV 182
H + HRDLKPENLLL+ ++ +++ DFGLS + + + GT Y+APEV
Sbjct: 167 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEV 223
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSAD 238
+ G +K D+WS GVILY+LL+G PF+ +N + +K+ K Y F P W S
Sbjct: 224 L--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 281
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFR 267
+ L+ ++L PS RIS +++ W +
Sbjct: 282 AKDLIRKMLTYVPSMRISARDALDHEWIQ 310
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 152/282 (53%), Gaps = 23/282 (8%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQS----VXXXXXXXXXXLKVGLV-DQTKR 59
K QKY+ ++G+G + V H TG + ++ V + T+R
Sbjct: 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRR 148
Query: 60 EISVMRLIQ-HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQ 117
E ++R + HP+++ + + S + ++ V + + GELF ++ K L E R +
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL-LHTTCGTPA 176
L+ A+ F H+ + HRDLKPEN+LLD+N ++++DFG S C + G L CGTP
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS----CHLEPGEKLRELCGTPG 264
Query: 177 YVAPEVI------SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYK 230
Y+APE++ + GY G + D+W+CGVIL+ LLAG PF + M R I + Y+
Sbjct: 265 YLAPEILKCSMDETHPGY-GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ 323
Query: 231 F--PTW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
F P W S+ V+ L+SR+L +P R++ + +++P+F +
Sbjct: 324 FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 13/269 (4%)
Query: 7 VLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRL 66
+ +Y+ R+LG+G+F +V + TGQ + + RE+ +++
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 105
Query: 67 IQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAIDFC 125
+ HPN+M++YE K Y V E GGELF ++ S+ + E A + +Q++S I +
Sbjct: 106 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM 165
Query: 126 HSRGVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEV 182
H + HRDLKPENLLL+ ++ +++ DFGLS + + + GT Y+APEV
Sbjct: 166 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEV 222
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSAD 238
+ G +K D+WS GVILY+LL+G PF+ +N + +K+ K Y F P W S
Sbjct: 223 L--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 280
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFR 267
+ L+ ++L PS RIS +++ W +
Sbjct: 281 AKDLIRKMLTYVPSMRISARDALDHEWIQ 309
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 147/277 (53%), Gaps = 13/277 (4%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
+ + ++ + +E R+LG+G+F KV AR TG L+ V+ T E
Sbjct: 14 VNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTE 73
Query: 61 ISVMRLIQ-HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQL 118
++ L + HP + Q++ + +++FVME+ GG+L + K + E AR Y ++
Sbjct: 74 KRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEI 133
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT-CGTPAY 177
ISA+ F H +G+ +RDLK +N+LLD G K+ DFG+ C +G+ T CGTP Y
Sbjct: 134 ISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC---NGVTTATFCGTPDY 190
Query: 178 VAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSA 237
+APE++ Y G D W+ GV+LY +L G+ PF N ++ I + +PTW
Sbjct: 191 IAPEILQEMLY-GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
Query: 238 DVRKLLSRILDPNPSTRI-SIAK-----IMENPWFRK 268
D +L + NP+ R+ S+ + I+ +P+F++
Sbjct: 250 DATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 139/264 (52%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G GTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLAGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 139/264 (52%), Gaps = 12/264 (4%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ +++ + LG G+F +V +H +G +K+ ++ T E +++ +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHS 127
P ++++ + +Y VMEY GGE+F + + G+ E AR Y Q++ ++ HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ +RDLKPENLL+D+ G ++VTDFG + K G GTP Y+APE+I +G
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLXGTPEYLAPEIILSKG 214
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
Y+ D W+ GV++Y + AGY PF + +Y KI +FP+ FS+D++ LL +L
Sbjct: 215 YN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLL 273
Query: 248 DPNPSTRI-----SIAKIMENPWF 266
+ + R + I + WF
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 138/263 (52%), Gaps = 13/263 (4%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y++ LG+G F+ V H TG L + +RE + R +QHPN
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPN 89
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++++++ + ++ Y V + GGELF+ V++ E A QQ++ +I +CHS G+
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 149
Query: 131 YHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
HR+LKPENLLL + +K+ DFGL+ + H GTP Y++PEV+ +
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKA--DYKFPTW--FSADVRKLL 243
Y DIW+CGVILY+LL GY PF D + +Y +I DY P W + + + L+
Sbjct: 207 Y-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 265
Query: 244 SRILDPNPSTRISIAKIMENPWF 266
+L NP RI+ + ++ PW
Sbjct: 266 DSMLTVNPKKRITADQALKVPWI 288
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 13/269 (4%)
Query: 7 VLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRL 66
+ +Y+ R+LG+G+F +V + TGQ + + RE+ +++
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 88
Query: 67 IQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAIDFC 125
+ HPN+M++YE K Y V E GGELF ++ S+ + E A + +Q++S I +
Sbjct: 89 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM 148
Query: 126 HSRGVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEV 182
H + HRDLKPENLLL+ ++ +++ DFGLS + + + GT Y+APEV
Sbjct: 149 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEV 205
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FSAD 238
+ G +K D+WS GVILY+LL+G PF+ +N + +K+ K Y F P W S
Sbjct: 206 L--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 263
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFR 267
+ L+ ++L PS RIS +++ W +
Sbjct: 264 AKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 139/263 (52%), Gaps = 13/263 (4%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y++ LG+G F+ V H TG L + +RE + R +QHPN
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPN 66
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++++++ + ++ Y V + GGELF+ V++ E A QQ++ +I +CHS G+
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 131 YHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
HR+LKPENLLL + +K+ DFGL+ + H GTP Y++PEV+ +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--W--FSADVRKLL 243
Y DIW+CGVILY+LL GY PF D + +Y +I Y +P+ W + + + L+
Sbjct: 184 Y-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 244 SRILDPNPSTRISIAKIMENPWF 266
+L NP RI+ + ++ PW
Sbjct: 243 DSMLTVNPKKRITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 139/262 (53%), Gaps = 13/262 (4%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y++ LG+G F+ V H TG L + +RE + R +QHPN
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPN 66
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++++++ + ++ Y V + GGELF+ V++ E A QQ++ +I +CHS G+
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 131 YHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
HR+LKPENLLL + +K+ DFGL+ + H GTP Y++PEV+ +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--W--FSADVRKLL 243
Y DIW+CGVILY+LL GY PF D + +Y +I Y +P+ W + + + L+
Sbjct: 184 Y-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 244 SRILDPNPSTRISIAKIMENPW 265
+L NP RI+ + ++ PW
Sbjct: 243 DSMLTVNPKKRITADQALKVPW 264
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 139/263 (52%), Gaps = 13/263 (4%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y++ LG+G F+ V H TG L + +RE + R +QHPN
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPN 65
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++++++ + ++ Y V + GGELF+ V++ E A QQ++ +I +CHS G+
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 125
Query: 131 YHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
HR+LKPENLLL + +K+ DFGL+ + H GTP Y++PEV+ +
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--W--FSADVRKLL 243
Y DIW+CGVILY+LL GY PF D + +Y +I Y +P+ W + + + L+
Sbjct: 183 Y-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 241
Query: 244 SRILDPNPSTRISIAKIMENPWF 266
+L NP RI+ + ++ PW
Sbjct: 242 DSMLTVNPKKRITADQALKVPWI 264
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 145/275 (52%), Gaps = 19/275 (6%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHL---GTGQSVXXXXXXXXXXLKVGL-VDQTKREI 61
K+ + +EL R+LG+G + KV+ R + TG+ ++ TK E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLIS 120
+++ ++HP ++ + + K+Y ++EY GGELF ++ + G EDTA Y ++
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCK---HQDGLLHTTCGTPAY 177
A+ H +G+ +RDLKPEN++L+ G +K+TDFGL CK H + HT CGT Y
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL-----CKESIHDGTVTHTFCGTIEY 187
Query: 178 VAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSA 237
+APE++ R G++ D WS G ++Y +L G PF N KI K P + +
Sbjct: 188 MAPEILMRSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQ 246
Query: 238 DVRKLLSRILDPNPSTRIS-----IAKIMENPWFR 267
+ R LL ++L N ++R+ ++ +P+FR
Sbjct: 247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 144/271 (53%), Gaps = 17/271 (6%)
Query: 7 VLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRL 66
+ +Y+ R+LG+G+F +V + TGQ + + RE+ +++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 67 IQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAIDFC 125
+ HPN+ ++YE K Y V E GGELF ++ S+ + E A + +Q++S I +
Sbjct: 83 LDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYX 142
Query: 126 HSRGVYHRDLKPENLLLD---ENGMLKVTDFGLSA--LAKCKHQDGLLHTTCGTPAYVAP 180
H + HRDLKPENLLL+ ++ +++ DFGLS A K +D + GT Y+AP
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI-----GTAYYIAP 197
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW--FS 236
EV+ G +K D+WS GVILY+LL+G PF+ +N + +K+ K Y F P W S
Sbjct: 198 EVL--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVS 255
Query: 237 ADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
+ L+ + L PS RIS +++ W +
Sbjct: 256 ESAKDLIRKXLTYVPSXRISARDALDHEWIQ 286
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 151/268 (56%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQ--SVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
YE+G LG G FA V R GTG+ + + G+ ++ +RE++++R I+
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPN++ ++++ +KT + ++E GGELF ++ K L ED A ++ +Q++ + + HS
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 128 RGVYHRDLKPEN-LLLDE---NGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ + H DLKPEN +LLD+ N +K+ DFG++ + ++ GTP +VAPE++
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIV 183
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL- 242
+ G +AD+WS GVI Y+LL+G PF I+ +Y F + ++ +L
Sbjct: 184 NYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA 242
Query: 243 ---LSRILDPNPSTRISIAKIMENPWFR 267
+ R+L +P R++IA+ +E+ W +
Sbjct: 243 KDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 153/279 (54%), Gaps = 28/279 (10%)
Query: 10 QKYELG---RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRL 66
Q Y+L + LG+G+F+ H + Q+ + + T++EI+ ++L
Sbjct: 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKI------ISKRMEANTQKEITALKL 61
Query: 67 IQ-HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKY-FQQLISAIDF 124
+ HPN+++++EV + + VME GGELF+++ K K +T Y ++L+SA+
Sbjct: 62 CEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSH 121
Query: 125 CHSRGVYHRDLKPENLLL-DENGML--KVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
H GV HRDLKPENLL DEN L K+ DFG + L +Q L T C T Y APE
Sbjct: 122 MHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP--LKTPCFTLHYAAPE 179
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPF--HDSNLMA-----MYRKIAKADYKF--P 232
++++ GYD + D+WS GVILY +L+G +PF HD +L + +KI K D+ F
Sbjct: 180 LLNQNGYD-ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGE 238
Query: 233 TW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFRKG 269
W S + + L+ +L +P+ R+ ++ + N W + G
Sbjct: 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG 277
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 144/275 (52%), Gaps = 19/275 (6%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHL---GTGQSVXXXXXXXXXXLKVGL-VDQTKREI 61
K+ + +EL R+LG+G + KV+ R + TG+ ++ TK E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLIS 120
+++ ++HP ++ + + K+Y ++EY GGELF ++ + G EDTA Y ++
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCK---HQDGLLHTTCGTPAY 177
A+ H +G+ +RDLKPEN++L+ G +K+TDFGL CK H + H CGT Y
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL-----CKESIHDGTVTHXFCGTIEY 187
Query: 178 VAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSA 237
+APE++ R G++ D WS G ++Y +L G PF N KI K P + +
Sbjct: 188 MAPEILMRSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQ 246
Query: 238 DVRKLLSRILDPNPSTRIS-----IAKIMENPWFR 267
+ R LL ++L N ++R+ ++ +P+FR
Sbjct: 247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 150/268 (55%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQ--SVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
YE+G LG G FA V R GTG+ + + G+ ++ +RE++++R I+
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPN++ ++++ +KT + ++E GGELF ++ K L ED A ++ +Q++ + + HS
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 128 RGVYHRDLKPEN-LLLDE---NGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ + H DLKPEN +LLD+ N +K+ DFG++ + ++ GTP +VAPE++
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIV 190
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL- 242
+ G +AD+WS GVI Y+LL+G PF I+ +Y F + ++ +L
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA 249
Query: 243 ---LSRILDPNPSTRISIAKIMENPWFR 267
+ R+L +P R+ IA+ +E+ W +
Sbjct: 250 KDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 151/268 (56%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQ--SVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
YE+G LG G FA V R GTG+ + + G+ ++ +RE++++R I+
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPN++ ++++ +KT + ++E GGELF ++ K L ED A ++ +Q++ + + HS
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 128 RGVYHRDLKPEN-LLLDE---NGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ + H DLKPEN +LLD+ N +K+ DFG++ + ++ GTP +VAPE++
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNIFGTPEFVAPEIV 204
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL- 242
+ G +AD+WS GVI Y+LL+G PF I+ +Y F + ++ +L
Sbjct: 205 NYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA 263
Query: 243 ---LSRILDPNPSTRISIAKIMENPWFR 267
+ R+L +P R+ IA+ +E+ W +
Sbjct: 264 KDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 141/268 (52%), Gaps = 8/268 (2%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGT--GQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
L+ KY +G LLG+G++ KV T ++V + G + K+EI ++R
Sbjct: 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEAN-VKKEIQLLR 61
Query: 66 LIQHPNVMQIYEVMAS--KTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISA 121
++H NV+Q+ +V+ + K K+Y VMEY G E+ V + + A YF QLI
Sbjct: 62 RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDG 121
Query: 122 IDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
+++ HS+G+ H+D+KP NLLL G LK++ G++ D T+ G+PA+ PE
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 182 VISR-RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
+ + + G K DIWS GV LY + G PF N+ ++ I K Y P +
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS 241
Query: 241 KLLSRILDPNPSTRISIAKIMENPWFRK 268
LL +L+ P+ R SI +I ++ WFRK
Sbjct: 242 DLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 142/264 (53%), Gaps = 16/264 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQH 69
Y+L LG+G F+ V R K+ D K RE + RL++H
Sbjct: 33 YQLFEELGKGAFSVV---RRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKK-VSKGKLKEDTARKYFQQLISAIDFCHSR 128
PN++++++ ++ + Y V + GGELF+ V++ E A Q++ +++ H
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 129 GVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISR 185
+ HRDLKPENLLL + +K+ DFGL+ + + Q GTP Y++PEV+ +
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF--GFAGTPGYLSPEVLRK 207
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--W--FSADVRK 241
Y G DIW+CGVILY+LL GY PF D + +Y++I Y FP+ W + + +
Sbjct: 208 DPY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKN 266
Query: 242 LLSRILDPNPSTRISIAKIMENPW 265
L++++L NP+ RI+ + +++PW
Sbjct: 267 LINQMLTINPAKRITADQALKHPW 290
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 130/229 (56%), Gaps = 18/229 (7%)
Query: 53 LVDQTKREISVMRLIQ-HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDT 110
L + T +E+ ++R + HPN++Q+ + + T + V + K GELF ++ K L E
Sbjct: 66 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 125
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL-LH 169
RK + L+ I H + HRDLKPEN+LLD++ +K+TDFG S C+ G L
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLR 181
Query: 170 TTCGTPAYVAPEVI------SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRK 223
+ CGTP+Y+APE+I + GY G + D+WS GVI+Y LLAG PF M M R
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM 240
Query: 224 IAKADYKF--PTW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
I +Y+F P W +S V+ L+SR L P R + + + +P+F++
Sbjct: 241 IMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 141/269 (52%), Gaps = 12/269 (4%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
K+ ++ +EL ++LG+G+F KV+ A T Q L V+ T E V+
Sbjct: 14 KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 66 LI-QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAID 123
L +HP + ++ +K ++FVMEY GG+L + S K A Y ++I +
Sbjct: 74 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQ---DGLLHTTCGTPAYVAP 180
F HS+G+ +RDLK +N+LLD++G +K+ DFG+ CK D + CGTP Y+AP
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGM-----CKENMLGDAKTNEFCGTPDYIAP 188
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E++ + Y+ D WS GV+LY +L G PFH + ++ I + +P W + +
Sbjct: 189 EILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAK 247
Query: 241 KLLSRILDPNPSTRISI-AKIMENPWFRK 268
LL ++ P R+ + I ++P FR+
Sbjct: 248 DLLVKLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 129/229 (56%), Gaps = 18/229 (7%)
Query: 53 LVDQTKREISVMRLIQ-HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDT 110
L + T +E+ ++R + HPN++Q+ + + T + V + K GELF ++ K L E
Sbjct: 66 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 125
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL-LH 169
RK + L+ I H + HRDLKPEN+LLD++ +K+TDFG S C+ G L
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLR 181
Query: 170 TTCGTPAYVAPEVI------SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRK 223
CGTP+Y+APE+I + GY G + D+WS GVI+Y LLAG PF M M R
Sbjct: 182 EVCGTPSYLAPEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM 240
Query: 224 IAKADYKF--PTW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
I +Y+F P W +S V+ L+SR L P R + + + +P+F++
Sbjct: 241 IMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 129/229 (56%), Gaps = 18/229 (7%)
Query: 53 LVDQTKREISVMRLIQ-HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDT 110
L + T +E+ ++R + HPN++Q+ + + T + V + K GELF ++ K L E
Sbjct: 53 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 112
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL-LH 169
RK + L+ I H + HRDLKPEN+LLD++ +K+TDFG S C+ G L
Sbjct: 113 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLR 168
Query: 170 TTCGTPAYVAPEVI------SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRK 223
CGTP+Y+APE+I + GY G + D+WS GVI+Y LLAG PF M M R
Sbjct: 169 EVCGTPSYLAPEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM 227
Query: 224 IAKADYKF--PTW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
I +Y+F P W +S V+ L+SR L P R + + + +P+F++
Sbjct: 228 IMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 148/278 (53%), Gaps = 24/278 (8%)
Query: 51 VGLVDQTKREIS-----VMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK 105
V ++D++KR+ S ++R QHPN++ + +V +Y V E +GGEL K+ + K
Sbjct: 57 VKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK 116
Query: 106 L-KEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLL-LDENG---MLKVTDFGLSALAK 160
E A + +++ HS+GV HRDLKP N+L +DE+G L++ DFG + +
Sbjct: 117 FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK--Q 174
Query: 161 CKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDS---NL 217
+ ++GLL T C T +VAPEV+ R+GYD + DIWS G++LY +LAGY PF +
Sbjct: 175 LRAENGLLMTPCYTANFVAPEVLKRQGYD-EGCDIWSLGILLYTMLAGYTPFANGPSDTP 233
Query: 218 MAMYRKIAKADYKFP--TW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSK 273
+ +I + W S + L+S++L +P R++ +++++PW + K
Sbjct: 234 EEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW----VTQK 289
Query: 274 SAKSKTAIKESSLVDVDAAFGPIENSASTEAPRPMTKP 311
++ + L V A ++ ++ P P KP
Sbjct: 290 DKLPQSQLSHQDLQLVKGAMAATYSALNSSKPTPQLKP 327
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 148/278 (53%), Gaps = 24/278 (8%)
Query: 51 VGLVDQTKREIS-----VMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK 105
V ++D++KR+ S ++R QHPN++ + +V +Y V E +GGEL K+ + K
Sbjct: 57 VKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK 116
Query: 106 L-KEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLL-LDENG---MLKVTDFGLSALAK 160
E A + +++ HS+GV HRDLKP N+L +DE+G L++ DFG + +
Sbjct: 117 FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK--Q 174
Query: 161 CKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDS---NL 217
+ ++GLL T C T +VAPEV+ R+GYD + DIWS G++LY +LAGY PF +
Sbjct: 175 LRAENGLLMTPCYTANFVAPEVLKRQGYD-EGCDIWSLGILLYTMLAGYTPFANGPSDTP 233
Query: 218 MAMYRKIAKADYKFP--TW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSK 273
+ +I + W S + L+S++L +P R++ +++++PW + K
Sbjct: 234 EEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW----VTQK 289
Query: 274 SAKSKTAIKESSLVDVDAAFGPIENSASTEAPRPMTKP 311
++ + L V A ++ ++ P P KP
Sbjct: 290 DKLPQSQLSHQDLQLVKGAMAATYSALNSSKPTPQLKP 327
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 130/226 (57%), Gaps = 13/226 (5%)
Query: 55 DQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARK 113
++ EIS+++ + HPN++++++V K Y V E+ +GGELF+++ ++ K E A
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 114 YFQQLISAIDFCHSRGVYHRDLKPENLLLDENGML---KVTDFGLSALAKCKHQDGLLHT 170
+Q++S I + H + HRD+KPEN+LL+ L K+ DFGLS+ +D L
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLRD 207
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADY- 229
GT Y+APEV+ ++ +K D+WSCGVI+Y+LL GY PF N + +K+ K Y
Sbjct: 208 RLGTAYYIAPEVLKKKY--NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY 265
Query: 230 -KFPTW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNS 272
F W S + ++L+ +L + + R + + + + W +K N+
Sbjct: 266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANN 311
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 152/281 (54%), Gaps = 17/281 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTPA+VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPAFVAPEIV 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+ + R+L +P R++I +++PW K +++ A S+ A
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWI-KPKDTQQALSRKA 288
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 136/262 (51%), Gaps = 4/262 (1%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M++Y GR LG+G FAK Y + T + LK ++ EI++ + +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHS 127
+P+V+ + +Y V+E + L + + K + E AR + +Q I + + H+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
V HRDLK NL L+++ +K+ DFGL+ K + T CGTP Y+APEV+ ++G
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+ + DIWS G ILY LL G PF S L Y +I K +Y P + L+ R+L
Sbjct: 219 HSFE-VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRML 277
Query: 248 DPNPSTRISIAKIMENPWFRKG 269
+P+ R S+A+++ + +F G
Sbjct: 278 HADPTLRPSVAELLTDEFFTSG 299
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 146/284 (51%), Gaps = 22/284 (7%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQ---- 56
M K L +Y + + LG G +V A T + V +G +
Sbjct: 1 MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRK-FAIGSAREADPA 59
Query: 57 --TKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARK 113
+ EI +++ + HP +++I ++ Y V+E +GGELF KV K LKE T +
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 114 YFQQLISAIDFCHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHT 170
YF Q++ A+ + H G+ HRDLKPEN+LL +E+ ++K+TDFG S K + L+ T
Sbjct: 119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS---KILGETSLMRT 175
Query: 171 TCGTPAYVAPEVISRRGYDG--DKADIWSCGVILYVLLAGYLPFHDSNL-MAMYRKIAKA 227
CGTP Y+APEV+ G G D WS GVIL++ L+GY PF + +++ +I
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
Query: 228 DYKFPTWFSADVRK----LLSRILDPNPSTRISIAKIMENPWFR 267
Y F A+V + L+ ++L +P R + + + +PW +
Sbjct: 236 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 146/284 (51%), Gaps = 22/284 (7%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQ---- 56
M K L +Y + + LG G +V A T + V +G +
Sbjct: 1 MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRK-FAIGSAREADPA 59
Query: 57 --TKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARK 113
+ EI +++ + HP +++I ++ Y V+E +GGELF KV K LKE T +
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 114 YFQQLISAIDFCHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHT 170
YF Q++ A+ + H G+ HRDLKPEN+LL +E+ ++K+TDFG S K + L+ T
Sbjct: 119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS---KILGETSLMRT 175
Query: 171 TCGTPAYVAPEVISRRGYDG--DKADIWSCGVILYVLLAGYLPFHDSNL-MAMYRKIAKA 227
CGTP Y+APEV+ G G D WS GVIL++ L+GY PF + +++ +I
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
Query: 228 DYKFPTWFSADVRK----LLSRILDPNPSTRISIAKIMENPWFR 267
Y F A+V + L+ ++L +P R + + + +PW +
Sbjct: 236 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 146/284 (51%), Gaps = 22/284 (7%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQ---- 56
M K L +Y + + LG G +V A T + V +G +
Sbjct: 7 MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRK-FAIGSAREADPA 65
Query: 57 --TKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARK 113
+ EI +++ + HP +++I ++ Y V+E +GGELF KV K LKE T +
Sbjct: 66 LNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKL 124
Query: 114 YFQQLISAIDFCHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHT 170
YF Q++ A+ + H G+ HRDLKPEN+LL +E+ ++K+TDFG S K + L+ T
Sbjct: 125 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS---KILGETSLMRT 181
Query: 171 TCGTPAYVAPEVISRRGYDG--DKADIWSCGVILYVLLAGYLPFHDSNL-MAMYRKIAKA 227
CGTP Y+APEV+ G G D WS GVIL++ L+GY PF + +++ +I
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 241
Query: 228 DYKFPTWFSADVRK----LLSRILDPNPSTRISIAKIMENPWFR 267
Y F A+V + L+ ++L +P R + + + +PW +
Sbjct: 242 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 146/284 (51%), Gaps = 22/284 (7%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQ---- 56
M K L +Y + + LG G +V A T + V +G +
Sbjct: 1 MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRK-FAIGSAREADPA 59
Query: 57 --TKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARK 113
+ EI +++ + HP +++I ++ Y V+E +GGELF KV K LKE T +
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 114 YFQQLISAIDFCHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHT 170
YF Q++ A+ + H G+ HRDLKPEN+LL +E+ ++K+TDFG S K + L+ T
Sbjct: 119 YFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS---KILGETSLMRT 175
Query: 171 TCGTPAYVAPEVISRRGYDG--DKADIWSCGVILYVLLAGYLPFHDSNL-MAMYRKIAKA 227
CGTP Y+APEV+ G G D WS GVIL++ L+GY PF + +++ +I
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
Query: 228 DYKFPTWFSADVRK----LLSRILDPNPSTRISIAKIMENPWFR 267
Y F A+V + L+ ++L +P R + + + +PW +
Sbjct: 236 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 140/269 (52%), Gaps = 12/269 (4%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
K+ ++ + L ++LG+G+F KV+ A T Q L V+ T E V+
Sbjct: 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72
Query: 66 LI-QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAID 123
L +HP + ++ +K ++FVMEY GG+L + S K A Y ++I +
Sbjct: 73 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQ---DGLLHTTCGTPAYVAP 180
F HS+G+ +RDLK +N+LLD++G +K+ DFG+ CK D + CGTP Y+AP
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGM-----CKENMLGDAKTNXFCGTPDYIAP 187
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E++ + Y+ D WS GV+LY +L G PFH + ++ I + +P W + +
Sbjct: 188 EILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAK 246
Query: 241 KLLSRILDPNPSTRISI-AKIMENPWFRK 268
LL ++ P R+ + I ++P FR+
Sbjct: 247 DLLVKLFVREPEKRLGVRGDIRQHPLFRE 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 151/281 (53%), Gaps = 17/281 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+ + R+L +P R++I +++PW K +++ A S+ A
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWI-KPKDTQQALSRKA 288
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 144/268 (53%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFR 267
+ + R+L +P R++I +++PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 145/279 (51%), Gaps = 22/279 (7%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQ------TKR 59
K L +Y + + LG G +V A T + V +G + +
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRK-FAIGSAREADPALNVET 63
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQL 118
EI +++ + HP +++I ++ Y V+E +GGELF KV K LKE T + YF Q+
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 119 ISAIDFCHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP 175
+ A+ + H G+ HRDLKPEN+LL +E+ ++K+TDFG S K + L+ T CGTP
Sbjct: 123 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS---KILGETSLMRTLCGTP 179
Query: 176 AYVAPEVISRRGYDG--DKADIWSCGVILYVLLAGYLPFHDSNL-MAMYRKIAKADYKFP 232
Y+APEV+ G G D WS GVIL++ L+GY PF + +++ +I Y F
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 239
Query: 233 TWFSADVRK----LLSRILDPNPSTRISIAKIMENPWFR 267
A+V + L+ ++L +P R + + + +PW +
Sbjct: 240 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 144/268 (53%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 188
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 189 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFR 267
+ + R+L +P R++I +++PW +
Sbjct: 248 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 151/281 (53%), Gaps = 17/281 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+ + R+L +P R++I +++PW K +++ A S+ A
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWI-KPKDTQQALSRKA 288
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 144/268 (53%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFR 267
+ + R+L +P R++I +++PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 144/268 (53%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFR 267
+ + R+L +P R++I +++PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 144/268 (53%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 188
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 189 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFR 267
+ + R+L +P R++I +++PW +
Sbjct: 248 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 151/281 (53%), Gaps = 17/281 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTA 280
+ + R+L +P R++I +++PW K +++ A S+ A
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWI-KPKDTQQALSRKA 288
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 144/268 (53%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFR 267
+ + R+L +P R++I +++PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 144/268 (53%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFR 267
+ + R+L +P R++I +++PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 144/268 (53%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFR 267
+ + R+L +P R++I +++PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 135/262 (51%), Gaps = 4/262 (1%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M++Y GR LG+G FAK Y + T + LK ++ EI++ + +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHS 127
+P+V+ + +Y V+E + L + + K + E AR + +Q I + + H+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
V HRDLK NL L+++ +K+ DFGL+ K + CGTP Y+APEV+ ++G
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+ + DIWS G ILY LL G PF S L Y +I K +Y P + L+ R+L
Sbjct: 219 HSFE-VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRML 277
Query: 248 DPNPSTRISIAKIMENPWFRKG 269
+P+ R S+A+++ + +F G
Sbjct: 278 HADPTLRPSVAELLTDEFFTSG 299
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 135/262 (51%), Gaps = 4/262 (1%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M++Y GR LG+G FAK Y + T + LK ++ EI++ + +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHS 127
+P+V+ + +Y V+E + L + + K + E AR + +Q I + + H+
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
V HRDLK NL L+++ +K+ DFGL+ K + CGTP Y+APEV+ ++G
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+ + DIWS G ILY LL G PF S L Y +I K +Y P + L+ R+L
Sbjct: 219 HSFE-VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRML 277
Query: 248 DPNPSTRISIAKIMENPWFRKG 269
+P+ R S+A+++ + +F G
Sbjct: 278 HADPTLRPSVAELLTDEFFTSG 299
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 135/262 (51%), Gaps = 4/262 (1%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M++Y GR LG+G FAK Y + T + LK ++ EI++ + +
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 84
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHS 127
+P+V+ + +Y V+E + L + + K + E AR + +Q I + + H+
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN 144
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
V HRDLK NL L+++ +K+ DFGL+ K + CGTP Y+APEV+ ++G
Sbjct: 145 NRVIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRIL 247
+ + DIWS G ILY LL G PF S L Y +I K +Y P + L+ R+L
Sbjct: 203 HSFE-VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRML 261
Query: 248 DPNPSTRISIAKIMENPWFRKG 269
+P+ R S+A+++ + +F G
Sbjct: 262 HADPTLRPSVAELLTDEFFTSG 283
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 145/279 (51%), Gaps = 22/279 (7%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQ------TKR 59
K L +Y + + LG G +V A T + V +G + +
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRK-FAIGSAREADPALNVET 203
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQL 118
EI +++ + HP +++I ++ Y V+E +GGELF KV K LKE T + YF Q+
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 119 ISAIDFCHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP 175
+ A+ + H G+ HRDLKPEN+LL +E+ ++K+TDFG S K + L+ T CGTP
Sbjct: 263 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS---KILGETSLMRTLCGTP 319
Query: 176 AYVAPEVISRRGYDG--DKADIWSCGVILYVLLAGYLPFHDSNL-MAMYRKIAKADYKFP 232
Y+APEV+ G G D WS GVIL++ L+GY PF + +++ +I Y F
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 379
Query: 233 TWFSADVRK----LLSRILDPNPSTRISIAKIMENPWFR 267
A+V + L+ ++L +P R + + + +PW +
Sbjct: 380 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 144/268 (53%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + ++E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFR 267
+ + R+L +P R++I +++PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 145/279 (51%), Gaps = 22/279 (7%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQ------TKR 59
K L +Y + + LG G +V A T + V +G + +
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRK-FAIGSAREADPALNVET 189
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQL 118
EI +++ + HP +++I ++ Y V+E +GGELF KV K LKE T + YF Q+
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 119 ISAIDFCHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP 175
+ A+ + H G+ HRDLKPEN+LL +E+ ++K+TDFG S K + L+ T CGTP
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS---KILGETSLMRTLCGTP 305
Query: 176 AYVAPEVISRRGYDG--DKADIWSCGVILYVLLAGYLPFHDSNL-MAMYRKIAKADYKFP 232
Y+APEV+ G G D WS GVIL++ L+GY PF + +++ +I Y F
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 365
Query: 233 TWFSADVRK----LLSRILDPNPSTRISIAKIMENPWFR 267
A+V + L+ ++L +P R + + + +PW +
Sbjct: 366 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 146/272 (53%), Gaps = 20/272 (7%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKV-GL-VDQTKREISVMRLIQH 69
YEL ++G+G F+ V + TGQ GL + KRE S+ +++H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGG----ELFKKVSKGKL-KEDTARKYFQQLISAIDF 124
P+++++ E +S +Y V E+ G E+ K+ G + E A Y +Q++ A+ +
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 125 CHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLH-TTCGTPAYVAP 180
CH + HRD+KPEN+LL + + +K+ DFG++ + GL+ GTP ++AP
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG---ESGLVAGGRVGTPHFMAP 202
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--W--FS 236
EV+ R Y G D+W CGVIL++LL+G LPF+ + ++ I K YK W S
Sbjct: 203 EVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHIS 260
Query: 237 ADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
+ L+ R+L +P+ RI++ + + +PW ++
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 143/268 (53%), Gaps = 16/268 (5%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y+ G LG G FA V R TG + + G+ + +RE+S+++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPNV+ ++EV +KT + + E GGELF ++ K L E+ A ++ +Q+++ + + HS
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
+ H DLKPEN +LLD N +K+ DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIV 189
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWF----SADV 239
+ G +AD+WS GVI Y+LL+G PF ++ +Y+F + SA
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFR 267
+ + R+L +P R++I +++PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 144/271 (53%), Gaps = 30/271 (11%)
Query: 16 RLLGQGNFAKVYYARHLGTG-QSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQ 74
R LG G F V+ +G + V + + +Q + EI V++ + HPN+++
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPM---EQIEAEIEVLKSLDHPNIIK 84
Query: 75 IYEVMASKTKIYFVMEYAKGGELFKKV----SKGK-LKEDTARKYFQQLISAIDFCHSRG 129
I+EV +Y VME +GGEL +++ ++GK L E + +Q+++A+ + HS+
Sbjct: 85 IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH 144
Query: 130 VYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQDGLLHTT--CGTPAYVAPEVIS 184
V H+DLKPEN+L + + +K+ DFGL+ L K H+T GT Y+APEV
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE-----HSTNAAGTALYMAPEVFK 199
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTW------FSAD 238
R K DIWS GV++Y LL G LPF ++L + + KA YK P + +
Sbjct: 200 RDV--TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ---KATYKEPNYAVECRPLTPQ 254
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKG 269
LL ++L +P R S A+++ + WF++
Sbjct: 255 AVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 140/272 (51%), Gaps = 31/272 (11%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-----VMRL 66
YE+ +G G+++ H T V ++D++KR+ + ++R
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNME-----------FAVKIIDKSKRDPTEEIEILLRY 72
Query: 67 IQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFC 125
QHPN++ + +V +Y V E KGGEL K+ + K E A + +++
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYL 132
Query: 126 HSRGVYHRDLKPENLL-LDENG---MLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
H++GV HRDLKP N+L +DE+G +++ DFG + + + ++GLL T C T +VAPE
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA--KQLRAENGLLMTPCYTANFVAPE 190
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFH---DSNLMAMYRKIAKADYKFPTWF--- 235
V+ R+GYD DIWS GV+LY +L GY PF D + +I + +
Sbjct: 191 VLERQGYDA-ACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS 249
Query: 236 -SADVRKLLSRILDPNPSTRISIAKIMENPWF 266
S + L+S++L +P R++ A ++ +PW
Sbjct: 250 VSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y++G LG G FA V R TG + + G+ ++ +RE+S++R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
HPN++ +++V ++T + ++E GGELF ++ K L E+ A + +Q++ +++ H+
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGL-LHTTCGTPAYVAPEV 182
+ + H DLKPEN +LLD+N +K+ DFGL+ + +DG+ GTP +VAPE+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFKNIFGTPEFVAPEI 189
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
++ G +AD+WS GVI Y+LL+G PF I Y F F + +L
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 243 ----LSRILDPNPSTRISIAKIMENPW 265
+ ++L R++I + + +PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 31/272 (11%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-----VMRL 66
YE+ +G G+++ H T V ++D++KR+ + ++R
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXE-----------FAVKIIDKSKRDPTEEIEILLRY 72
Query: 67 IQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFC 125
QHPN++ + +V +Y V E KGGEL K+ + K E A + +++
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYL 132
Query: 126 HSRGVYHRDLKPENLL-LDENG---MLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
H++GV HRDLKP N+L +DE+G +++ DFG + + + ++GLL T C T +VAPE
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA--KQLRAENGLLXTPCYTANFVAPE 190
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFH---DSNLMAMYRKIAKADYKFPTWF--- 235
V+ R+GYD DIWS GV+LY L GY PF D + +I + +
Sbjct: 191 VLERQGYDA-ACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS 249
Query: 236 -SADVRKLLSRILDPNPSTRISIAKIMENPWF 266
S + L+S+ L +P R++ A ++ +PW
Sbjct: 250 VSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 14/268 (5%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM 64
G + + + + +G+G F++VY A L G V + +EI ++
Sbjct: 27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86
Query: 65 RLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL------FKKVSKGKLKEDTARKYFQQL 118
+ + HPNV++ Y ++ V+E A G+L FKK K + E T KYF QL
Sbjct: 87 KQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQL 145
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
SA++ HSR V HRD+KP N+ + G++K+ D GL K H+ GTP Y+
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HSLVGTPYYM 203
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDS--NLMAMYRKIAKADY-KFPT-W 234
+PE I GY+ K+DIWS G +LY + A PF+ NL ++ +KI + DY P+
Sbjct: 204 SPERIHENGYNF-KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDH 262
Query: 235 FSADVRKLLSRILDPNPSTRISIAKIME 262
+S ++R+L++ ++P+P R + + +
Sbjct: 263 YSEELRQLVNMCINPDPEKRPDVTYVYD 290
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 147/301 (48%), Gaps = 37/301 (12%)
Query: 2 ETKGKVLMQKYELGR-LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
E K + Y+L + +LG G KV H TGQ LK+ L D K
Sbjct: 20 EPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCA---------LKL-LYDSPKAR 69
Query: 61 ISVMRLIQHPN------VMQIYEVMA-SKTKIYFVMEYAKGGELFKKVSK---GKLKEDT 110
V Q ++ +YE M K + +ME +GGELF ++ + E
Sbjct: 70 QEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTERE 129
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGL 167
A + + + +AI F HS + HRD+KPENLL +++ +LK+TDFG AK Q+
Sbjct: 130 AAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNA- 185
Query: 168 LHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----MYRK 223
L T C TP YVAPEV+ YD D+WS GVI+Y+LL G+ PF+ + A M R+
Sbjct: 186 LQTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR 244
Query: 224 IAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKT 279
I Y FP W S D ++L+ +L +P+ R++I + M +PW + + T
Sbjct: 245 IRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHT 304
Query: 280 A 280
A
Sbjct: 305 A 305
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 128/254 (50%), Gaps = 4/254 (1%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
LG+G FAK + T + LK ++ EIS+ R + H +V+ +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 77 EVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYHRDL 135
++ V+E + L + + K L E AR Y +Q++ + H V HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
K NL L+E+ +K+ DFGL+ K ++ T CGTP Y+APEV+S++G+ + D+
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE-VDV 200
Query: 196 WSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRI 255
WS G I+Y LL G PF S L Y +I K +Y P + L+ ++L +P+ R
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 260
Query: 256 SIAKIMENPWFRKG 269
+I +++ + +F G
Sbjct: 261 TINELLNDEFFTSG 274
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 128/254 (50%), Gaps = 4/254 (1%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
LG+G FAK + T + LK ++ EIS+ R + H +V+ +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 77 EVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYHRDL 135
++ V+E + L + + K L E AR Y +Q++ + H V HRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
K NL L+E+ +K+ DFGL+ K ++ T CGTP Y+APEV+S++G+ + D+
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE-VDV 204
Query: 196 WSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRI 255
WS G I+Y LL G PF S L Y +I K +Y P + L+ ++L +P+ R
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 264
Query: 256 SIAKIMENPWFRKG 269
+I +++ + +F G
Sbjct: 265 TINELLNDEFFTSG 278
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 128/254 (50%), Gaps = 4/254 (1%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
LG+G FAK + T + LK ++ EIS+ R + H +V+ +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 77 EVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYHRDL 135
++ V+E + L + + K L E AR Y +Q++ + H V HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
K NL L+E+ +K+ DFGL+ K ++ T CGTP Y+APEV+S++G+ + D+
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE-VDV 200
Query: 196 WSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRI 255
WS G I+Y LL G PF S L Y +I K +Y P + L+ ++L +P+ R
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 260
Query: 256 SIAKIMENPWFRKG 269
+I +++ + +F G
Sbjct: 261 TINELLNDEFFTSG 274
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 147/301 (48%), Gaps = 37/301 (12%)
Query: 2 ETKGKVLMQKYELGR-LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
E K + Y+L + +LG G KV H TGQ LK+ L D K
Sbjct: 1 EPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCA---------LKL-LYDSPKAR 50
Query: 61 ISVMRLIQHPN------VMQIYEVMA-SKTKIYFVMEYAKGGELFKKVSK---GKLKEDT 110
V Q ++ +YE M K + +ME +GGELF ++ + E
Sbjct: 51 QEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTERE 110
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGL 167
A + + + +AI F HS + HRD+KPENLL +++ +LK+TDFG AK Q+
Sbjct: 111 AAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNA- 166
Query: 168 LHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----MYRK 223
L T C TP YVAPEV+ YD D+WS GVI+Y+LL G+ PF+ + A M R+
Sbjct: 167 LQTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR 225
Query: 224 IAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKT 279
I Y FP W S D ++L+ +L +P+ R++I + M +PW + + T
Sbjct: 226 IRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHT 285
Query: 280 A 280
A
Sbjct: 286 A 286
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 158/317 (49%), Gaps = 20/317 (6%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+KY + +G+G+F K + G+ + ++++RE++V+ ++
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR-MSSKEREESRREVAVLANMK 81
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK---LKEDTARKYFQQLISAIDFC 125
HPN++Q E +Y VM+Y +GG+LFK+++ K +ED +F Q+ A+
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISR 185
H R + HRD+K +N+ L ++G +++ DFG++ + + L GTP Y++PE+
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEICEN 199
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADY-KFPTWFSADVRKLLS 244
+ Y+ +K+DIW+ G +LY L F ++ + KI + +S D+R L+S
Sbjct: 200 KPYN-NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVS 258
Query: 245 RILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAIKESSLVDVDAAFG--PI------ 296
++ NP R S+ I+E + K + + S I E + + FG PI
Sbjct: 259 QLFKRNPRDRPSVNSILEKGFIAKRI--EKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPA 316
Query: 297 --ENSASTEAPRPMTKP 311
+NS S + +TKP
Sbjct: 317 SGQNSISVMPAQKITKP 333
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 130/267 (48%), Gaps = 20/267 (7%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVG-LVDQTKREISVMRLIQ- 68
+Y LG LLG+G F V+ L V L L D + V L +
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 69 -----HPNVMQIYEVMASKTKIYFVMEYA-KGGELFKKVS-KGKLKEDTARKYFQQLISA 121
HP V+++ + ++ V+E +LF ++ KG L E +R +F Q+++A
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 122 IDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
I CHSRGV HRD+K EN+L+D G K+ DFG AL D GT Y P
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALL----HDEPYTDFDGTRVYSPP 207
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E ISR Y A +WS G++LY ++ G +PF ++I +A+ FP S D
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------QEILEAELHFPAHVSPDCC 261
Query: 241 KLLSRILDPNPSTRISIAKIMENPWFR 267
L+ R L P PS+R S+ +I+ +PW +
Sbjct: 262 ALIRRCLAPKPSSRPSLEEILLDPWMQ 288
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 140/273 (51%), Gaps = 16/273 (5%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
+V + + +LG+G+F KV A GT + ++ V+ T E V+
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 66 LIQHPNVM-QIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAID 123
L+ P + Q++ + ++YFVMEY GG+L + + GK KE A Y ++ +
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF 134
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQ--DGL-LHTTCGTPAYVAP 180
F H RG+ +RDLK +N++LD G +K+ DFG+ CK DG+ CGTP Y+AP
Sbjct: 135 FLHKRGIIYRDLKLDNVMLDSEGHIKIADFGM-----CKEHMMDGVTTREFCGTPDYIAP 189
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E+I+ + Y G D W+ GV+LY +LAG PF + +++ I + + +P S +
Sbjct: 190 EIIAYQPY-GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAV 248
Query: 241 KLLSRILDPNPSTRISIAK-----IMENPWFRK 268
+ ++ +P+ R+ + E+ +FR+
Sbjct: 249 SICKGLMTKHPAKRLGCGPEGERDVREHAFFRR 281
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 125/230 (54%), Gaps = 23/230 (10%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + VME GGELF ++ +G
Sbjct: 106 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 165
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG AK
Sbjct: 166 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTS 222
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----M 220
L T C TP YVAPEV+ YD D+WS GVI+Y+LL GY PF+ ++ +A M
Sbjct: 223 HNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 281
Query: 221 YRKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R++I + M +PW
Sbjct: 282 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 148/283 (52%), Gaps = 18/283 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y++G LG G FA V R TG + + G+ ++ +RE+S++R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
H NV+ +++V ++T + ++E GGELF ++ K L E+ A + +Q++ +++ H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGL-LHTTCGTPAYVAPEV 182
+ + H DLKPEN +LLD+N +K+ DFGL+ + +DG+ GTP +VAPE+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFKNIFGTPEFVAPEI 189
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
++ G +AD+WS GVI Y+LL+G PF I Y F F + +L
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 243 ----LSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAI 281
+ ++L R++I + + +PW N ++ + ++
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESV 291
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 143/272 (52%), Gaps = 20/272 (7%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKV-GL-VDQTKREISVMRLIQH 69
YEL ++G+G F+ V + TGQ GL + KRE S+ +++H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGG----ELFKKVSKGKL-KEDTARKYFQQLISAIDF 124
P+++++ E +S +Y V E+ G E+ K+ G + E A Y +Q++ A+ +
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 125 CHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHT-TCGTPAYVAP 180
CH + HRD+KP +LL + + +K+ FG++ + GL+ GTP ++AP
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG---ESGLVAGGRVGTPHFMAP 204
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--W--FS 236
EV+ R Y G D+W CGVIL++LL+G LPF+ + ++ I K YK W S
Sbjct: 205 EVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHIS 262
Query: 237 ADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
+ L+ R+L +P+ RI++ + + +PW ++
Sbjct: 263 ESAKDLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 125/230 (54%), Gaps = 23/230 (10%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + VME GGELF ++ +G
Sbjct: 100 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 159
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG AK
Sbjct: 160 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTS 216
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----M 220
L T C TP YVAPEV+ YD D+WS GVI+Y+LL GY PF+ ++ +A M
Sbjct: 217 HNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 275
Query: 221 YRKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R++I + M +PW
Sbjct: 276 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 143/272 (52%), Gaps = 20/272 (7%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKV-GL-VDQTKREISVMRLIQH 69
YEL ++G+G F+ V + TGQ GL + KRE S+ +++H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGG----ELFKKVSKGKL-KEDTARKYFQQLISAIDF 124
P+++++ E +S +Y V E+ G E+ K+ G + E A Y +Q++ A+ +
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 125 CHSRGVYHRDLKPENLLL---DENGMLKVTDFGLSALAKCKHQDGLLHT-TCGTPAYVAP 180
CH + HRD+KP +LL + + +K+ FG++ + GL+ GTP ++AP
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG---ESGLVAGGRVGTPHFMAP 202
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT--W--FS 236
EV+ R Y G D+W CGVIL++LL+G LPF+ + ++ I K YK W S
Sbjct: 203 EVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHIS 260
Query: 237 ADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
+ L+ R+L +P+ RI++ + + +PW ++
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 148/283 (52%), Gaps = 18/283 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y++G LG G FA V R TG + + G+ ++ +RE+S++R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
H NV+ +++V ++T + ++E GGELF ++ K L E+ A + +Q++ +++ H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGL-LHTTCGTPAYVAPEV 182
+ + H DLKPEN +LLD+N +K+ DFGL+ + +DG+ GTP +VAPE+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFKNIFGTPEFVAPEI 189
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
++ G +AD+WS GVI Y+LL+G PF I Y F F + +L
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 243 ----LSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAI 281
+ ++L R++I + + +PW N ++ + ++
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESV 291
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 142/267 (53%), Gaps = 18/267 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y++G LG G FA V R TG + + G+ ++ +RE+S++R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
H NV+ +++V ++T + ++E GGELF ++ K L E+ A + +Q++ +++ H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGL-LHTTCGTPAYVAPEV 182
+ + H DLKPEN +LLD+N +K+ DFGL+ + +DG+ GTP +VAPE+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFKNIFGTPEFVAPEI 189
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
++ G +AD+WS GVI Y+LL+G PF I Y F F + +L
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 243 ----LSRILDPNPSTRISIAKIMENPW 265
+ ++L R++I + + +PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 148/283 (52%), Gaps = 18/283 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y++G LG G FA V R TG + + G+ ++ +RE+S++R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
H NV+ +++V ++T + ++E GGELF ++ K L E+ A + +Q++ +++ H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGL-LHTTCGTPAYVAPEV 182
+ + H DLKPEN +LLD+N +K+ DFGL+ + +DG+ GTP +VAPE+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFKNIFGTPEFVAPEI 189
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
++ G +AD+WS GVI Y+LL+G PF I Y F F + +L
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 243 ----LSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAI 281
+ ++L R++I + + +PW N ++ + ++
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESV 291
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 4/254 (1%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
LG+G FAK + T + LK ++ EIS+ R + H +V+ +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 77 EVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYHRDL 135
++ V+E + L + + K L E AR Y +Q++ + H V HRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
K NL L+E+ +K+ DFGL+ K ++ CGTP Y+APEV+S++G+ + D+
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE-VDV 222
Query: 196 WSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRI 255
WS G I+Y LL G PF S L Y +I K +Y P + L+ ++L +P+ R
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 282
Query: 256 SIAKIMENPWFRKG 269
+I +++ + +F G
Sbjct: 283 TINELLNDEFFTSG 296
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 125/230 (54%), Gaps = 23/230 (10%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + VME GGELF ++ +G
Sbjct: 70 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 129
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG AK
Sbjct: 130 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTS 186
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----M 220
L T C TP YVAPEV+ YD D+WS GVI+Y+LL GY PF+ ++ +A M
Sbjct: 187 HNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 245
Query: 221 YRKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R++I + M +PW
Sbjct: 246 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 148/283 (52%), Gaps = 18/283 (6%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
Y++G LG G FA V R TG + + G+ ++ +RE+S++R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLISAIDFCHS 127
H NV+ +++V ++T + ++E GGELF ++ K L E+ A + +Q++ +++ H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 128 RGVYHRDLKPEN-LLLDEN---GMLKVTDFGLSALAKCKHQDGL-LHTTCGTPAYVAPEV 182
+ + H DLKPEN +LLD+N +K+ DFGL+ + +DG+ GTP +VAPE+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFKNIFGTPEFVAPEI 189
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
++ G +AD+WS GVI Y+LL+G PF I Y F F + +L
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 243 ----LSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAI 281
+ ++L R++I + + +PW N ++ + ++
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESV 291
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 125/230 (54%), Gaps = 23/230 (10%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + VME GGELF ++ +G
Sbjct: 54 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 113
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG AK
Sbjct: 114 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTS 170
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----M 220
L T C TP YVAPEV+ YD D+WS GVI+Y+LL GY PF+ ++ +A M
Sbjct: 171 HNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 229
Query: 221 YRKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R++I + M +PW
Sbjct: 230 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 125/230 (54%), Gaps = 23/230 (10%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + VME GGELF ++ +G
Sbjct: 55 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 114
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG AK
Sbjct: 115 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTS 171
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----M 220
L T C TP YVAPEV+ YD D+WS GVI+Y+LL GY PF+ ++ +A M
Sbjct: 172 HNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 230
Query: 221 YRKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R++I + M +PW
Sbjct: 231 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 4/254 (1%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
LG+G FAK + T + LK ++ EIS+ R + H +V+ +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 77 EVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYHRDL 135
++ V+E + L + + K L E AR Y +Q++ + H V HRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
K NL L+E+ +K+ DFGL+ K ++ CGTP Y+APEV+S++G+ + D+
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE-VDV 224
Query: 196 WSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRI 255
WS G I+Y LL G PF S L Y +I K +Y P + L+ ++L +P+ R
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 284
Query: 256 SIAKIMENPWFRKG 269
+I +++ + +F G
Sbjct: 285 TINELLNDEFFTSG 298
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 125/230 (54%), Gaps = 23/230 (10%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + VME GGELF ++ +G
Sbjct: 60 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 119
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG AK
Sbjct: 120 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTS 176
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----M 220
L T C TP YVAPEV+ YD D+WS GVI+Y+LL GY PF+ ++ +A M
Sbjct: 177 HNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 235
Query: 221 YRKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R++I + M +PW
Sbjct: 236 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 125/230 (54%), Gaps = 23/230 (10%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + VME GGELF ++ +G
Sbjct: 56 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 115
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG AK
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTS 172
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----M 220
L T C TP YVAPEV+ YD D+WS GVI+Y+LL GY PF+ ++ +A M
Sbjct: 173 HNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 231
Query: 221 YRKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R++I + M +PW
Sbjct: 232 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 125/230 (54%), Gaps = 23/230 (10%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + VME GGELF ++ +G
Sbjct: 62 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 121
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG AK
Sbjct: 122 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTS 178
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----M 220
L T C TP YVAPEV+ YD D+WS GVI+Y+LL GY PF+ ++ +A M
Sbjct: 179 HNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 237
Query: 221 YRKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R++I + M +PW
Sbjct: 238 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 125/230 (54%), Gaps = 23/230 (10%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + VME GGELF ++ +G
Sbjct: 61 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 120
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG AK
Sbjct: 121 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTS 177
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----M 220
L T C TP YVAPEV+ YD D+WS GVI+Y+LL GY PF+ ++ +A M
Sbjct: 178 HNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 236
Query: 221 YRKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R++I + M +PW
Sbjct: 237 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 4/254 (1%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
LG+G FAK + T + LK ++ EIS+ R + H +V+ +
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 77 EVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYHRDL 135
++ V+E + L + + K L E AR Y +Q++ + H V HRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
K NL L+E+ +K+ DFGL+ K ++ CGTP Y+APEV+S++G+ + D+
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE-VDV 198
Query: 196 WSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRI 255
WS G I+Y LL G PF S L Y +I K +Y P + L+ ++L +P+ R
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 258
Query: 256 SIAKIMENPWFRKG 269
+I +++ + +F G
Sbjct: 259 TINELLNDEFFTSG 272
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 125/230 (54%), Gaps = 23/230 (10%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + VME GGELF ++ +G
Sbjct: 56 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 115
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG AK
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTS 172
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----M 220
L T C TP YVAPEV+ YD D+WS GVI+Y+LL GY PF+ ++ +A M
Sbjct: 173 HNSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 231
Query: 221 YRKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R++I + M +PW
Sbjct: 232 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 125/249 (50%), Gaps = 11/249 (4%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM-RLIQHP 70
+ +++G+G+F KV ARH LK E +V+ + ++HP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSRG 129
++ ++ + K+YFV++Y GGELF + + + E AR Y ++ SA+ + HS
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCK---HQDGLLHTTCGTPAYVAPEVISRR 186
+ +RDLKPEN+LLD G + +TDFGL CK + T CGTP Y+APEV+ ++
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGL-----CKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRI 246
YD D W G +LY +L G PF+ N MY I + + R LL +
Sbjct: 215 PYD-RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGL 273
Query: 247 LDPNPSTRI 255
L + + R+
Sbjct: 274 LQKDRTKRL 282
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 116/228 (50%), Gaps = 6/228 (2%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ YE+ +++G+G F +V RH T + +K E +M
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
P V+Q++ +Y VMEY GG+L +S + E AR Y +++ A+D HS G
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR--- 186
HRD+KP+N+LLD++G LK+ DFG + + K T GTP Y++PEV+ +
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 247
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIA--KADYKFP 232
GY G + D WS GV LY +L G PF+ +L+ Y KI K FP
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP 295
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 116/228 (50%), Gaps = 6/228 (2%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ YE+ +++G+G F +V RH T + +K E +M
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
P V+Q++ +Y VMEY GG+L +S + E AR Y +++ A+D HS G
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR--- 186
HRD+KP+N+LLD++G LK+ DFG + + K T GTP Y++PEV+ +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIA--KADYKFP 232
GY G + D WS GV LY +L G PF+ +L+ Y KI K FP
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP 300
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 116/228 (50%), Gaps = 6/228 (2%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ YE+ +++G+G F +V RH T + +K E +M
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
P V+Q++ +Y VMEY GG+L +S + E AR Y +++ A+D HS G
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR--- 186
HRD+KP+N+LLD++G LK+ DFG + + K T GTP Y++PEV+ +
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIA--KADYKFP 232
GY G + D WS GV LY +L G PF+ +L+ Y KI K FP
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP 300
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 152/326 (46%), Gaps = 26/326 (7%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
+E K ++ Y++ LG G F V+ TG + V ++E
Sbjct: 42 VEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV---RKE 98
Query: 61 ISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS--KGKLKEDTARKYFQQL 118
I M +++HP ++ +++ ++ + E+ GGELF+KV+ K+ ED A +Y +Q+
Sbjct: 99 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV 158
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLD--ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA 176
+ H H DLKPEN++ + LK+ DFGL+A K + T GT
Sbjct: 159 CKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAE 215
Query: 177 YVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFP---- 232
+ APEV + G D+WS GV+ Y+LL+G PF N R + D+
Sbjct: 216 FAAPEVAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF 274
Query: 233 TWFSADVRKLLSRILDPNPSTRISIAKIMENPWFR----KGLNSKSAKSK-TAIKESSLV 287
+ S D + + ++L +P+TR++I + +E+PW G +S+ S+ T I++S
Sbjct: 275 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKT 334
Query: 288 DVDA------AFGPIENSASTEAPRP 307
DA G I N +S RP
Sbjct: 335 KYDAWPEPLPPLGRISNYSSLRKHRP 360
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 152/326 (46%), Gaps = 26/326 (7%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
+E K ++ Y++ LG G F V+ TG + V ++E
Sbjct: 148 VEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETV---RKE 204
Query: 61 ISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTARKYFQQL 118
I M +++HP ++ +++ ++ + E+ GGELF+KV+ K+ ED A +Y +Q+
Sbjct: 205 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV 264
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLD--ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA 176
+ H H DLKPEN++ + LK+ DFGL+A K + T GT
Sbjct: 265 CKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAE 321
Query: 177 YVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFP---- 232
+ APEV + G D+WS GV+ Y+LL+G PF N R + D+
Sbjct: 322 FAAPEVAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF 380
Query: 233 TWFSADVRKLLSRILDPNPSTRISIAKIMENPWFR----KGLNSKSAKSK-TAIKESSLV 287
+ S D + + ++L +P+TR++I + +E+PW G +S+ S+ T I++S
Sbjct: 381 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKT 440
Query: 288 DVDA------AFGPIENSASTEAPRP 307
DA G I N +S RP
Sbjct: 441 KYDAWPEPLPPLGRISNYSSLRKHRP 466
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 124/230 (53%), Gaps = 23/230 (10%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + VME GGELF ++ +G
Sbjct: 54 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 113
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG AK
Sbjct: 114 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTS 170
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----M 220
L C TP YVAPEV+ YD D+WS GVI+Y+LL GY PF+ ++ +A M
Sbjct: 171 HNSLTEPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 229
Query: 221 YRKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R++I + M +PW
Sbjct: 230 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 152/320 (47%), Gaps = 27/320 (8%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ Y++ +++G+G F +V RH + + +K E +M
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 134
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
P V+Q++ +Y VMEY GG+L +S + E A+ Y +++ A+D HS G
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD--GLLH--TTCGTPAYVAPEVISR 185
+ HRD+KP+N+LLD++G LK+ DFG C D G++H T GTP Y++PEV+
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFG-----TCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 186 R---GYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD---- 238
+ GY G + D WS GV L+ +L G PF+ +L+ Y KI D+K F D
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI--MDHKNSLCFPEDAEIS 307
Query: 239 --VRKLLSRILDPNPST--RISIAKIMENPWFRKGL----NSKSAKSKTAIKESSLVDVD 290
+ L+ L R + +I ++P+F+ N + + + SS +D
Sbjct: 308 KHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDID-S 366
Query: 291 AAFGPIENSASTEAPRPMTK 310
+ F IE+ P+ K
Sbjct: 367 SNFDDIEDDKGDVETFPIPK 386
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 124/218 (56%), Gaps = 16/218 (7%)
Query: 60 EISVMRLIQHPNVMQIYEVMASKTK--IYFVMEYAKGGELFKKVSKGK-----LKEDTAR 112
E++++R ++HPN+++ Y+ + +T +Y VMEY +GG+L ++KG L E+
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 113 KYFQQLISAIDFCHSRG-----VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL 167
+ QL A+ CH R V HRDLKP N+ LD +K+ DFGL+ + H
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSF 172
Query: 168 LHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKA 227
T GTP Y++PE ++R Y+ +K+DIWS G +LY L A PF + + KI +
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 228 DY-KFPTWFSADVRKLLSRILDPNPSTRISIAKIMENP 264
+ + P +S ++ ++++R+L+ R S+ +I+ENP
Sbjct: 232 KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 133/261 (50%), Gaps = 9/261 (3%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+KY +GQG VY A + TGQ V K L+ EI VMR ++
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKN 76
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
PN++ + +++ VMEY GG L V++ + E ++ + A++F HS
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD 189
V HRD+K +N+LL +G +K+TDFG A+ + T GTP ++APEV++R+ Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPEVVTRKAY- 193
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSN-LMAMYRKIAKA--DYKFPTWFSADVRKLLSRI 246
G K DIWS G++ ++ G P+ + N L A+Y + + P SA R L+R
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 247 LDPNPSTRISIAKIMENPWFR 267
LD + R S +++++ + +
Sbjct: 254 LDMDVEKRGSAKELLQHQFLK 274
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 124/218 (56%), Gaps = 16/218 (7%)
Query: 60 EISVMRLIQHPNVMQIYEVMASKTK--IYFVMEYAKGGELFKKVSKGK-----LKEDTAR 112
E++++R ++HPN+++ Y+ + +T +Y VMEY +GG+L ++KG L E+
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 113 KYFQQLISAIDFCHSRG-----VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL 167
+ QL A+ CH R V HRDLKP N+ LD +K+ DFGL+ + H +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDEDF 172
Query: 168 LHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKA 227
GTP Y++PE ++R Y+ +K+DIWS G +LY L A PF + + KI +
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 228 DY-KFPTWFSADVRKLLSRILDPNPSTRISIAKIMENP 264
+ + P +S ++ ++++R+L+ R S+ +I+ENP
Sbjct: 232 KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 150/281 (53%), Gaps = 21/281 (7%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLG---TGQSVXXXXXXXXXXL-KVGLVDQTKREI 61
KV ++ +EL ++LG G + KV+ R + TG+ + K + T+ E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 62 SVMRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-KGKLKEDTARKYFQQLI 119
V+ I Q P ++ ++ ++TK++ +++Y GGELF +S + + E + Y +++
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIV 169
Query: 120 SAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A++ H G+ +RD+K EN+LLD NG + +TDFGLS + + CGT Y+A
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMA 228
Query: 180 PEVISRRGYDG--DKA-DIWSCGVILYVLLAGYLPF----HDSNLMAMYRKIAKADYKFP 232
P+++ RG D DKA D WS GV++Y LL G PF ++ + R+I K++ +P
Sbjct: 229 PDIV--RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP 286
Query: 233 TWFSADVRKLLSRILDPNPSTRISIA-----KIMENPWFRK 268
SA + L+ R+L +P R+ +I E+ +F+K
Sbjct: 287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 133/261 (50%), Gaps = 16/261 (6%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM-QI 75
+LG+G+F KV + GT + ++ V+ T E V+ L P + Q+
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRGVYHRD 134
+ + ++YFVMEY GG+L + + G+ KE A Y ++ + F S+G+ +RD
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 467
Query: 135 LKPENLLLDENGMLKVTDFGLSALAKCKHQ--DGLLHTT-CGTPAYVAPEVISRRGYDGD 191
LK +N++LD G +K+ DFG+ CK DG+ CGTP Y+APE+I+ + Y G
Sbjct: 468 LKLDNVMLDSEGHIKIADFGM-----CKENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GK 521
Query: 192 KADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNP 251
D W+ GV+LY +LAG PF + +++ I + + +P S + + ++ +P
Sbjct: 522 SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHP 581
Query: 252 STRISIAK-----IMENPWFR 267
R+ I E+ +FR
Sbjct: 582 GKRLGCGPEGERDIKEHAFFR 602
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 133/261 (50%), Gaps = 16/261 (6%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM-QI 75
+LG+G+F KV + GT + ++ V+ T E V+ L P + Q+
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRGVYHRD 134
+ + ++YFVMEY GG+L + + G+ KE A Y ++ + F S+G+ +RD
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 146
Query: 135 LKPENLLLDENGMLKVTDFGLSALAKCKHQ--DGLLHTT-CGTPAYVAPEVISRRGYDGD 191
LK +N++LD G +K+ DFG+ CK DG+ CGTP Y+APE+I+ + Y G
Sbjct: 147 LKLDNVMLDSEGHIKIADFGM-----CKENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GK 200
Query: 192 KADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNP 251
D W+ GV+LY +LAG PF + +++ I + + +P S + + ++ +P
Sbjct: 201 SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHP 260
Query: 252 STRISIAK-----IMENPWFR 267
R+ I E+ +FR
Sbjct: 261 GKRLGCGPEGERDIKEHAFFR 281
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 16/218 (7%)
Query: 60 EISVMRLIQHPNVMQIYEVMASKTK--IYFVMEYAKGGELFKKVSKGK-----LKEDTAR 112
E++++R ++HPN+++ Y+ + +T +Y VMEY +GG+L ++KG L E+
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 113 KYFQQLISAIDFCHSRG-----VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL 167
+ QL A+ CH R V HRDLKP N+ LD +K+ DFGL+ + H
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSF 172
Query: 168 LHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKA 227
GTP Y++PE ++R Y+ +K+DIWS G +LY L A PF + + KI +
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 228 DY-KFPTWFSADVRKLLSRILDPNPSTRISIAKIMENP 264
+ + P +S ++ ++++R+L+ R S+ +I+ENP
Sbjct: 232 KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 145/283 (51%), Gaps = 32/283 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM-RLI 67
+Q ++L R++G+G++AKV R T + +D + E V +
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP ++ ++ ++++++FV+EY GG+L F + KL E+ AR Y ++ A+++ H
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL-----LHTTCGTPAYVAPE 181
RG+ +RDLK +N+LLD G +K+TD+G+ CK +GL T CGTP Y+APE
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGM-----CK--EGLRPGDTTSTFCGTPNYIAPE 223
Query: 182 VISRRGYD-GDKADIWSCGVILYVLLAGYLPFH--------DSNLMA-MYRKIAKADYKF 231
++ RG D G D W+ GV+++ ++AG PF D N +++ I + +
Sbjct: 224 IL--RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281
Query: 232 PTWFSADVRKLLSRILDPNPSTRI------SIAKIMENPWFRK 268
P S +L L+ +P R+ A I +P+FR
Sbjct: 282 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 132/261 (50%), Gaps = 9/261 (3%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+KY +GQG VY A + TGQ V K L+ EI VMR ++
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKN 76
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
PN++ + +++ VMEY GG L V++ + E ++ + A++F HS
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD 189
V HRD+K +N+LL +G +K+TDFG A+ + GTP ++APEV++R+ Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSEMVGTPYWMAPEVVTRKAY- 193
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSN-LMAMYRKIAKA--DYKFPTWFSADVRKLLSRI 246
G K DIWS G++ ++ G P+ + N L A+Y + + P SA R L+R
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 247 LDPNPSTRISIAKIMENPWFR 267
LD + R S +++++ + +
Sbjct: 254 LDMDVEKRGSAKELLQHQFLK 274
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 145/285 (50%), Gaps = 14/285 (4%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+KY +GQG VY A + TGQ V K L+ EI VMR ++
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKN 77
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
PN++ + +++ VMEY GG L V++ + E ++ + A++F HS
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD 189
V HR++K +N+LL +G +K+TDFG A+ + T GTP ++APEV++R+ Y
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPEVVTRKAY- 194
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSN-LMAMYRKIAKA--DYKFPTWFSADVRKLLSRI 246
G K DIWS G++ ++ G P+ + N L A+Y + + P SA R L+R
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 254
Query: 247 LDPNPSTRISIAKIMENPWFR--KGLNSKS---AKSKTAIKESSL 286
L+ + R S +++++ + + K L+S + A +K A K + L
Sbjct: 255 LEMDVEKRGSAKELIQHQFLKIAKPLSSLTPLIAAAKEATKNNHL 299
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 14/285 (4%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+KY +GQG VY A + TGQ V K L+ EI VMR ++
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKN 77
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
PN++ + +++ VMEY GG L V++ + E ++ + A++F HS
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD 189
V HRD+K +N+LL +G +K+TDFG A+ + GTP ++APEV++R+ Y
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSXMVGTPYWMAPEVVTRKAY- 194
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSN-LMAMYRKIAKA--DYKFPTWFSADVRKLLSRI 246
G K DIWS G++ ++ G P+ + N L A+Y + + P SA R L+R
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 254
Query: 247 LDPNPSTRISIAKIMENPWFR--KGLNSKS---AKSKTAIKESSL 286
L+ + R S +++++ + + K L+S + A +K A K + L
Sbjct: 255 LEMDVEKRGSAKELIQHQFLKIAKPLSSLTPLIAAAKEATKNNHL 299
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 142/277 (51%), Gaps = 11/277 (3%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
+E+ R +G+G+F KV + T + ++ V +E+ +M+ ++HP
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG-KLKEDTARKYFQQLISAIDFCHSRGV 130
++ ++ + ++ V++ GG+L + + KE+T + + +L+ A+D+ ++ +
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRI 136
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR---G 187
HRD+KP+N+LLDE+G + +TDF ++A+ + Q + T GT Y+APE+ S R G
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYMAPEMFSSRKGAG 193
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFH---DSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
Y D WS GV Y LL G P+H ++ + +P+ +S ++ LL
Sbjct: 194 YSF-AVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLK 252
Query: 245 RILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAI 281
++L+PNP R S ++N + +N + K I
Sbjct: 253 KLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLI 289
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 128/263 (48%), Gaps = 25/263 (9%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVD--QTKREISVMRLIQHPNVMQ 74
+LG G F +V+ TG + G+ D + K EISVM + H N++Q
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTR-----GMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 75 IYEVMASKTKIYFVMEYAKGGELFKKV--SKGKLKEDTARKYFQQLISAIDFCHSRGVYH 132
+Y+ SK I VMEY GGELF ++ L E + +Q+ I H + H
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILH 210
Query: 133 RDLKPENLLL--DENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD- 189
DLKPEN+L + +K+ DFGL+ K + + L GTP ++APEV++ YD
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LKVNFGTPEFLAPEVVN---YDF 264
Query: 190 -GDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKA-----DYKFPTWFSADVRKLL 243
D+WS GVI Y+LL+G PF N I D +F S + ++ +
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQD-ISEEAKEFI 323
Query: 244 SRILDPNPSTRISIAKIMENPWF 266
S++L S RIS ++ +++PW
Sbjct: 324 SKLLIKEKSWRISASEALKHPWL 346
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 23/230 (10%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + V E GGELF ++ +G
Sbjct: 100 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFT 159
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG AK
Sbjct: 160 EREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF---AKETTS 216
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMY--- 221
L T C TP YVAPEV+ YD D WS GVI Y+LL GY PF+ ++ +A+
Sbjct: 217 HNSLTTPCYTPYYVAPEVLGPEKYD-KSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGX 275
Query: 222 -RKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R +I + +PW
Sbjct: 276 KTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 141/280 (50%), Gaps = 26/280 (9%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM-RLI 67
+Q ++L R++G+G++AKV R T + +D + E V +
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP ++ ++ ++++++FV+EY GG+L F + KL E+ AR Y ++ A+++ H
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT---CGTPAYVAPEVI 183
RG+ +RDLK +N+LLD G +K+TD+G+ CK TT CGTP Y+APE++
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGM-----CKEGLRPGDTTSXFCGTPNYIAPEIL 193
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFH--------DSNLMA-MYRKIAKADYKFPTW 234
Y G D W+ GV+++ ++AG PF D N +++ I + + P
Sbjct: 194 RGEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 252
Query: 235 FSADVRKLLSRILDPNPSTRI------SIAKIMENPWFRK 268
S +L L+ +P R+ A I +P+FR
Sbjct: 253 MSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRN 292
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 141/280 (50%), Gaps = 26/280 (9%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM-RLI 67
+Q ++L R++G+G++AKV R T + +D + E V +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP ++ ++ ++++++FV+EY GG+L F + KL E+ AR Y ++ A+++ H
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT---CGTPAYVAPEVI 183
RG+ +RDLK +N+LLD G +K+TD+G+ CK TT CGTP Y+APE++
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGM-----CKEGLRPGDTTSXFCGTPNYIAPEIL 178
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFH--------DSNLMA-MYRKIAKADYKFPTW 234
Y G D W+ GV+++ ++AG PF D N +++ I + + P
Sbjct: 179 RGEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 237
Query: 235 FSADVRKLLSRILDPNPSTRI------SIAKIMENPWFRK 268
S +L L+ +P R+ A I +P+FR
Sbjct: 238 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 277
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 132/261 (50%), Gaps = 9/261 (3%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+KY +GQG VY A + TGQ V K L+ EI VMR ++
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKN 76
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
PN++ + +++ VMEY GG L V++ + E ++ + A++F HS
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD 189
V HRD+K +N+LL +G +K+TDFG A+ + GTP ++APEV++R+ Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSXMVGTPYWMAPEVVTRKAY- 193
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSN-LMAMYRKIAKA--DYKFPTWFSADVRKLLSRI 246
G K DIWS G++ ++ G P+ + N L A+Y + + P SA R L+R
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 247 LDPNPSTRISIAKIMENPWFR 267
L+ + R S +++++ + +
Sbjct: 254 LEMDVEKRGSAKELLQHQFLK 274
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 141/280 (50%), Gaps = 26/280 (9%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM-RLI 67
+Q ++L R++G+G++AKV R T + +D + E V +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP ++ ++ ++++++FV+EY GG+L F + KL E+ AR Y ++ A+++ H
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT---CGTPAYVAPEVI 183
RG+ +RDLK +N+LLD G +K+TD+G+ CK TT CGTP Y+APE++
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGM-----CKEGLRPGDTTSXFCGTPNYIAPEIL 182
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFH--------DSNLMA-MYRKIAKADYKFPTW 234
Y G D W+ GV+++ ++AG PF D N +++ I + + P
Sbjct: 183 RGEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 241
Query: 235 FSADVRKLLSRILDPNPSTRI------SIAKIMENPWFRK 268
S +L L+ +P R+ A I +P+FR
Sbjct: 242 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 149/325 (45%), Gaps = 25/325 (7%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
+E K + Y++ LG G F V+ TG+ L V K E
Sbjct: 42 VEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV---KNE 98
Query: 61 ISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG--KLKEDTARKYFQQL 118
IS+M + HP ++ +++ K ++ ++E+ GGELF +++ K+ E Y +Q
Sbjct: 99 ISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQA 158
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLD--ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA 176
+ H + H D+KPEN++ + + +K+ DFG LA + D ++ T T
Sbjct: 159 CEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFG---LATKLNPDEIVKVTTATAE 215
Query: 177 YVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFP---- 232
+ APE++ R G D+W+ GV+ YVLL+G PF + + + + + D++F
Sbjct: 216 FAAPEIVDREPV-GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAF 274
Query: 233 TWFSADVRKLLSRILDPNPSTRISIAKIMENPWFR--------KGLNSKSAKSKTAIKE- 283
+ S + + + +L P R+++ +E+PW + + +S+ K + IKE
Sbjct: 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEK 334
Query: 284 -SSLVDVDAAFGPIENSASTEAPRP 307
+ A G I N +S RP
Sbjct: 335 YADWPAPQPAIGRIANFSSLRKHRP 359
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 36/284 (12%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ-HPNVMQI 75
LLG+G +AKV A L G+ V RE+ + Q + N++++
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV---FREVETLYQCQGNKNILEL 76
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYHRD 134
E T+ Y V E +GG + + K K E A + + + +A+DF H++G+ HRD
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRD 136
Query: 135 LKPENLLLDEN---GMLKVTDFGLSALAKCKHQ-----DGLLHTTCGTPAYVAPEVIS-- 184
LKPEN+L + +K+ DF L + K + L T CG+ Y+APEV+
Sbjct: 137 LKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVF 196
Query: 185 --RRGYDGDKADIWSCGVILYVLLAGYLPF---------HDSNLMA------MYRKIAKA 227
+ + + D+WS GV+LY++L+GY PF D + ++ I +
Sbjct: 197 TDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG 256
Query: 228 DYKFP--TW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
Y+FP W S++ + L+S++L + R+S A+++++PW +
Sbjct: 257 KYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 135/269 (50%), Gaps = 16/269 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR-----EISVM 64
QKY LG G F V+ A + V L+ ++ K EI+++
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 65 RLIQHPNVMQIYEVMASKTKIYFVME-YAKGGELFKKVSK-GKLKEDTARKYFQQLISAI 122
++H N++++ ++ ++ VME + G +LF + + +L E A F+QL+SA+
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEV 182
+ + + HRD+K EN+++ E+ +K+ DFG +A + + L +T CGT Y APEV
Sbjct: 144 GYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE---RGKLFYTFCGTIEYCAPEV 200
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKL 242
+ Y G + ++WS GV LY L+ PF + + +A P S ++ L
Sbjct: 201 LMGNPYRGPELEMWSLGVTLYTLVFEENPFCE------LEETVEAAIHPPYLVSKELMSL 254
Query: 243 LSRILDPNPSTRISIAKIMENPWFRKGLN 271
+S +L P P R ++ K++ +PW + +N
Sbjct: 255 VSGLLQPVPERRTTLEKLVTDPWVTQPVN 283
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 147/299 (49%), Gaps = 45/299 (15%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE---------IS 62
+E+ LG G F KVY A++ TG L V +TK E I
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETG------------ALAAAKVIETKSEEELEDYIVEIE 60
Query: 63 VMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGE---LFKKVSKGKLKEDTARKYFQQLI 119
++ HP ++++ K++ ++E+ GG + ++ +G L E + +Q++
Sbjct: 61 ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQML 119
Query: 120 SAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSA--LAKCKHQDGLLHTTCGTPAY 177
A++F HS+ + HRDLK N+L+ G +++ DFG+SA L + +D + GTP +
Sbjct: 120 EALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI----GTPYW 175
Query: 178 VAPEVI-----SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYK-- 230
+APEV+ YD KADIWS G+ L + P H+ N M + KIAK+D
Sbjct: 176 MAPEVVMCETMKDTPYDY-KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL 234
Query: 231 -FPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWF-----RKGLNSKSAKSKTAIKE 283
P+ +S + R L LD NP TR S A+++E+P+ K L A++K + E
Sbjct: 235 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVME 293
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 147/299 (49%), Gaps = 45/299 (15%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE---------IS 62
+E+ LG G F KVY A++ TG L V +TK E I
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETG------------ALAAAKVIETKSEEELEDYIVEIE 68
Query: 63 VMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGE---LFKKVSKGKLKEDTARKYFQQLI 119
++ HP ++++ K++ ++E+ GG + ++ +G L E + +Q++
Sbjct: 69 ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQML 127
Query: 120 SAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSA--LAKCKHQDGLLHTTCGTPAY 177
A++F HS+ + HRDLK N+L+ G +++ DFG+SA L + +D + GTP +
Sbjct: 128 EALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI----GTPYW 183
Query: 178 VAPEVI-----SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYK-- 230
+APEV+ YD KADIWS G+ L + P H+ N M + KIAK+D
Sbjct: 184 MAPEVVMCETMKDTPYDY-KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL 242
Query: 231 -FPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWF-----RKGLNSKSAKSKTAIKE 283
P+ +S + R L LD NP TR S A+++E+P+ K L A++K + E
Sbjct: 243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVME 301
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 140/313 (44%), Gaps = 52/313 (16%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTG--QSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
L +KY L +GQG++ V A T +++ + V++ K E+ +M+
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV------SKGKLKEDTAR------- 112
+ HPN+ ++YEV + I VME GG L K+ S GK D +
Sbjct: 84 KLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP 143
Query: 113 ----------------------------KYFQQLISAIDFCHSRGVYHRDLKPENLLLDE 144
+Q+ SA+ + H++G+ HRD+KPEN L
Sbjct: 144 ECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST 203
Query: 145 NGM--LKVTDFGLS-ALAKCKHQDGLLHTT-CGTPAYVAPEVISRRGYD-GDKADIWSCG 199
N +K+ DFGLS K + + TT GTP +VAPEV++ G K D WS G
Sbjct: 204 NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 200 VILYVLLAGYLPFHDSNLMAMYRKI--AKADYKFPTW--FSADVRKLLSRILDPNPSTRI 255
V+L++LL G +PF N ++ K ++ P + S R LLS +L+ N R
Sbjct: 264 VLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERF 323
Query: 256 SIAKIMENPWFRK 268
+ +++PW +
Sbjct: 324 DAMRALQHPWISQ 336
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 36/284 (12%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ-HPNVMQI 75
+LG+G A+V +L T Q + + RE+ ++ Q H NV+++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYHRD 134
E + + Y V E +GG + + K + E A Q + SA+DF H++G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 135 LKPENLLLDENGM---LKVTDFGLSALAK----CKH-QDGLLHTTCGTPAYVAPEVISRR 186
LKPEN+L + +K+ DFGL + K C L T CG+ Y+APEV+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 187 GYDGD----KADIWSCGVILYVLLAGYLPF---------------HDSNLMAMYRKIAKA 227
+ + D+WS GVILY+LL+GY PF + ++ I +
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 228 DYKFP--TW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
Y+FP W S + L+S++L + R+S A+++++PW +
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 60
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKPENLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 137/258 (53%), Gaps = 21/258 (8%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE-----ISVMRLIQHPNV 72
+G+G+ V AR +G+ V + L Q +RE + +MR QH NV
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKM--------MDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYH 132
+++Y+ +++ +ME+ +GG L VS+ +L E+ + ++ A+ + H++GV H
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIH 164
Query: 133 RDLKPENLLLDENGMLKVTDFGLSA-LAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGD 191
RD+K +++LL +G +K++DFG A ++K + L GTP ++APEVISR Y
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXL---VGTPYWMAPEVISRSLY-AT 220
Query: 192 KADIWSCGVILYVLLAGYLP-FHDSNLMAM--YRKIAKADYKFPTWFSADVRKLLSRILD 248
+ DIWS G+++ ++ G P F DS + AM R K S +R L R+L
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLV 280
Query: 249 PNPSTRISIAKIMENPWF 266
+P R + +++++P+
Sbjct: 281 RDPQERATAQELLDHPFL 298
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 61
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKPENLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 61
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKPENLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 16/251 (6%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ +E+ +++G+G F +V + T + LK + E V+
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTARKYFQQLISAIDFCHS 127
+ ++ + +Y VM+Y GG+L +SK KL ED AR Y +++ AID H
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT--CGTPAYVAPEVISR 185
HRD+KP+N+LLD NG +++ DFG S L + DG + ++ GTP Y++PE++
Sbjct: 194 LHYVHRDIKPDNVLLDVNGHIRLADFG-SCLK--MNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 186 ----RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKAD--YKFP---TWFS 236
G G + D WS GV +Y +L G PF+ +L+ Y KI + ++FP T S
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVS 310
Query: 237 ADVRKLLSRIL 247
+ + L+ R++
Sbjct: 311 EEAKDLIQRLI 321
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 62
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKPENLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 123 SHRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 63
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKPENLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 124 SHRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 16/251 (6%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ +E+ +++G+G F +V + T + LK + E V+
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTARKYFQQLISAIDFCHS 127
+ ++ + +Y VM+Y GG+L +SK KL ED AR Y +++ AID H
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT--CGTPAYVAPEVISR 185
HRD+KP+N+LLD NG +++ DFG S L + DG + ++ GTP Y++PE++
Sbjct: 210 LHYVHRDIKPDNVLLDVNGHIRLADFG-SCLK--MNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 186 ----RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKAD--YKFP---TWFS 236
G G + D WS GV +Y +L G PF+ +L+ Y KI + ++FP T S
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVS 326
Query: 237 ADVRKLLSRIL 247
+ + L+ R++
Sbjct: 327 EEAKDLIQRLI 337
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 34/291 (11%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 8 FMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 66
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFC 125
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FC
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISR 185
HS V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLG 184
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADY 229
Y DIWS G I ++ F DS + ++R + DY
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 230 K--FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
K FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 60
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGX 178
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 136/287 (47%), Gaps = 20/287 (6%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQT--KREISV 63
K L +KY + LG+G F V+ + ++ +KV DQ K+EIS+
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKT------YMAKFVKVKGTDQVLVKKEISI 54
Query: 64 MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV--SKGKLKEDTARKYFQQLISA 121
+ + +H N++ ++E S ++ + E+ G ++F+++ S +L E Y Q+ A
Sbjct: 55 LNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEA 114
Query: 122 IDFCHSRGVYHRDLKPENLLLD--ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
+ F HS + H D++PEN++ + +K+ +FG + K LL T P Y A
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT---APEYYA 171
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPT----WF 235
PEV + D+WS G ++YVLL+G PF + I A+Y F
Sbjct: 172 PEV-HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI 230
Query: 236 SADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAIK 282
S + + R+L +R++ ++ +++PW ++ + S K +K
Sbjct: 231 SIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLK 277
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 60
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGC 178
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 209
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S++
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSSE 262
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 294
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 196
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S++
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSSE 249
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 250 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 281
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 182
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S++
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSSE 235
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 236 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 267
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 182
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S++
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSSE 235
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 236 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 267
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 62
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 181
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S++
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSSE 234
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 235 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 266
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 63
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 181
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S++
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSSE 234
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 235 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 266
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 60
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 65 RLIQ--HPNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 124
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 180
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S++
Sbjct: 181 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSSE 233
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 234 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 265
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 197
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S++
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSSE 250
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 251 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 282
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 224
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S++
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSSE 277
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 278 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 309
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 61
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 61
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 179
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 60
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGC 178
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 34/291 (11%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 8 FMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 66
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFC 125
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FC
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISR 185
HS V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLG 184
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADY 229
Y DIWS G I ++ F DS + ++R + DY
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 230 K--FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
K FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 132/260 (50%), Gaps = 19/260 (7%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE-----ISVMRLIQHPNV 72
+G+G+ V A +G+ V K+ L Q +RE + +MR QH NV
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVK--------KMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYH 132
+++Y +++ VME+ +GG L V+ ++ E+ ++ A+ H++GV H
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 139
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDK 192
RD+K +++LL +G +K++DFG A+ + GTP ++APE+ISR Y G +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPE 196
Query: 193 ADIWSCGVILYVLLAGYLPFHDS---NLMAMYRKIAKADYKFPTWFSADVRKLLSRILDP 249
DIWS G+++ ++ G P+ + M M R K S ++ L R+L
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 256
Query: 250 NPSTRISIAKIMENPWFRKG 269
+P+ R + A+++++P+ K
Sbjct: 257 DPAQRATAAELLKHPFLAKA 276
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 60
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 182
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S++
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSSE 235
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 236 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 267
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 132/260 (50%), Gaps = 19/260 (7%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE-----ISVMRLIQHPNV 72
+G+G+ V A +G+ V K+ L Q +RE + +MR QH NV
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVK--------KMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYH 132
+++Y +++ VME+ +GG L V+ ++ E+ ++ A+ H++GV H
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 150
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDK 192
RD+K +++LL +G +K++DFG A+ + GTP ++APE+ISR Y G +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPE 207
Query: 193 ADIWSCGVILYVLLAGYLPFHDS---NLMAMYRKIAKADYKFPTWFSADVRKLLSRILDP 249
DIWS G+++ ++ G P+ + M M R K S ++ L R+L
Sbjct: 208 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 267
Query: 250 NPSTRISIAKIMENPWFRKG 269
+P+ R + A+++++P+ K
Sbjct: 268 DPAQRATAAELLKHPFLAKA 287
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 59
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 177
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 60
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 132/260 (50%), Gaps = 19/260 (7%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE-----ISVMRLIQHPNV 72
+G+G+ V A +G+ V K+ L Q +RE + +MR QH NV
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVK--------KMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYH 132
+++Y +++ VME+ +GG L V+ ++ E+ ++ A+ H++GV H
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 143
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDK 192
RD+K +++LL +G +K++DFG A+ + GTP ++APE+ISR Y G +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPE 200
Query: 193 ADIWSCGVILYVLLAGYLPFHDS---NLMAMYRKIAKADYKFPTWFSADVRKLLSRILDP 249
DIWS G+++ ++ G P+ + M M R K S ++ L R+L
Sbjct: 201 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 260
Query: 250 NPSTRISIAKIMENPWFRKG 269
+P+ R + A+++++P+ K
Sbjct: 261 DPAQRATAAELLKHPFLAKA 280
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 61
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGC 179
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 239
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 60
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 178
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 63
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 62
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 63
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 62
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 180
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 240
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 65 RLIQ--HPNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 177
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S++
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSSE 230
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 231 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 262
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 64
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 182
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 65 RLIQ--HPNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 177
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S +
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSXE 230
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 231 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 262
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 160
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 216
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S++
Sbjct: 217 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSSE 269
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 270 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELN 60
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGC 178
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELN 59
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGC 177
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 132/260 (50%), Gaps = 19/260 (7%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE-----ISVMRLIQHPNV 72
+G+G+ V A +G+ V K+ L Q +RE + +MR QH NV
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVK--------KMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYH 132
+++Y +++ VME+ +GG L V+ ++ E+ ++ A+ H++GV H
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 148
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDK 192
RD+K +++LL +G +K++DFG A+ + GTP ++APE+ISR Y G +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPE 205
Query: 193 ADIWSCGVILYVLLAGYLPFHDS---NLMAMYRKIAKADYKFPTWFSADVRKLLSRILDP 249
DIWS G+++ ++ G P+ + M M R K S ++ L R+L
Sbjct: 206 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 265
Query: 250 NPSTRISIAKIMENPWFRKG 269
+P+ R + A+++++P+ K
Sbjct: 266 DPAQRATAAELLKHPFLAKA 285
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 63
Query: 69 HPNVMQIYEVMASKTKIYFVMEYA-KGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + F S + + Y QL+ + FCH
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 63
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 181
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 59
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVV-TLWYRAPEILLGC 177
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 60
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGC 178
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 238
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 59
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGC 177
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 64
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + + + Y QL+ + FCH
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGC 182
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 242
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 136/290 (46%), Gaps = 34/290 (11%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+ ++ +G+G + VY AR+ TG+ V + G+ REIS+++ +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELN 59
Query: 69 HPNVMQIYEVMASKTKIYFVMEYA-KGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCH 126
HPN++++ +V+ ++ K+Y V E+ + + F S + + Y QL+ + FCH
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
S V HRDLKP+NLL++ G +K+ DFGL A A H T Y APE++
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGC 177
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
Y DIWS G I ++ F DS + ++R + DYK
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 231 --FPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
FP W D R LLS++L +P+ RIS + +P+F+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 26/290 (8%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
YEL ++G G A V A + V +D+ +EI M HPN
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHHPN 74
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELF----KKVSKGK-----LKEDTARKYFQQLISAI 122
++ Y K +++ VM+ GG + V+KG+ L E T ++++ +
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCK---HQDGLLHTTCGTPAYVA 179
++ H G HRD+K N+LL E+G +++ DFG+SA ++ + T GTP ++A
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 180 PEVISR-RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYR----------KIAKAD 228
PEV+ + RGYD KADIWS G+ L G P+H M + + D
Sbjct: 195 PEVMEQVRGYDF-KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 253
Query: 229 YKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSK 278
+ + RK++S L +P R + A+++ + +F+K N + + K
Sbjct: 254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQEK 303
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 134/260 (51%), Gaps = 19/260 (7%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE-----ISVMRLIQHPNV 72
+G+G+ V A +G+ V K+ L Q +RE + +MR QH NV
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVK--------KMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYH 132
+++Y +++ VME+ +GG L V+ ++ E+ ++ A+ H++GV H
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 270
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDK 192
RD+K +++LL +G +K++DFG A+ + GTP ++APE+ISR Y G +
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPE 327
Query: 193 ADIWSCGVILYVLLAGYLP-FHDSNL--MAMYRKIAKADYKFPTWFSADVRKLLSRILDP 249
DIWS G+++ ++ G P F++ L M M R K S ++ L R+L
Sbjct: 328 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 387
Query: 250 NPSTRISIAKIMENPWFRKG 269
+P+ R + A+++++P+ K
Sbjct: 388 DPAQRATAAELLKHPFLAKA 407
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 16/251 (6%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ +E+ +++G+G F +V + + LK + E V+
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTARKYFQQLISAIDFCHS 127
+ ++ +Y VM+Y GG+L +SK +L E+ AR Y +++ AID H
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT--CGTPAYVAPEVISR 185
HRD+KP+N+L+D NG +++ DFG S L +DG + ++ GTP Y++PE++
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFG-SCLK--LMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 186 ----RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIA--KADYKFPTW---FS 236
+G G + D WS GV +Y +L G PF+ +L+ Y KI K ++FPT S
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVS 310
Query: 237 ADVRKLLSRIL 247
+ + L+ R++
Sbjct: 311 ENAKDLIRRLI 321
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 196
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S +
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSXE 249
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 250 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 281
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 224
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S +
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSXE 277
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 278 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 309
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 121/228 (53%), Gaps = 11/228 (4%)
Query: 50 KVGLVDQTKRE-----ISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKG 104
K+ L Q +RE + +MR QH NV+++Y +++ VME+ +GG L V+
Sbjct: 106 KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT 165
Query: 105 KLKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQ 164
++ E+ ++ A+ H++GV HRD+K +++LL +G +K++DFG A+ +
Sbjct: 166 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKE 223
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDS---NLMAMY 221
GTP ++APE+ISR Y G + DIWS G+++ ++ G P+ + M M
Sbjct: 224 VPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 282
Query: 222 RKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFRKG 269
R K S ++ L R+L +P+ R + A+++++P+ K
Sbjct: 283 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 197
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S +
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSXE 250
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 251 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 282
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 54 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 173
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 229
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S +
Sbjct: 230 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSXE 282
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 283 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 314
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 209
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD ++ F S++
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-------GQVFFRQRVSSE 262
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 294
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 36/284 (12%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ-HPNVMQI 75
+LG+G A+V +L T Q + + RE+ ++ Q H NV+++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYHRD 134
E + + Y V E +GG + + K + E A Q + SA+DF H++G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 135 LKPENLLLDENGM---LKVTDFGLSALAK----CKH-QDGLLHTTCGTPAYVAPEVISRR 186
LKPEN+L + +K+ DF L + K C L T CG+ Y+APEV+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 187 GYDGD----KADIWSCGVILYVLLAGYLPF---------------HDSNLMAMYRKIAKA 227
+ + D+WS GVILY+LL+GY PF + ++ I +
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 228 DYKFP--TW--FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
Y+FP W S + L+S++L + R+S A+++++PW +
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 65 RLIQ--HPNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 148
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 204
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S +
Sbjct: 205 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSXE 257
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 258 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 289
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 210
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD ++ F S++
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-------GQVFFRQRVSSE 263
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 295
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 210
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD ++ F S++
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-------GQVFFRQRVSSE 263
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 295
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 209
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD ++ F S++
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-------GQVFFRQRVSSE 262
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 294
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 130/281 (46%), Gaps = 34/281 (12%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
+G+G + VY AR+ TG+ V + G+ REIS+++ + HPN++++ +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLD 68
Query: 78 VMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYHRDL 135
V+ ++ K+Y V E+ + + + + Y QL+ + FCHS V HRDL
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
KP+NLL++ G +K+ DFGL A A H T Y APE++ Y DI
Sbjct: 129 KPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDI 186
Query: 196 WSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK--FPTW--- 234
WS G I ++ F DS + ++R + DYK FP W
Sbjct: 187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQ 246
Query: 235 --------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
D R LLS++L +P+ RIS + +P+F+
Sbjct: 247 DFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 65 RLIQ--HPNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 177
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD ++ F S++
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-------GQVFFRQRVSSE 230
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 231 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 262
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 210
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD ++ F S +
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-------GQVFFRQRVSXE 263
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 295
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 17/294 (5%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
L +YELG +LG G ++V+ AR L + V + +RE +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 68 QHPNVMQIYEVMASKTKI----YFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAI 122
HP ++ +Y+ ++T Y VMEY G L V ++G + A + A+
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS-ALAKCKHQDGLLHTTCGTPAYVAPE 181
+F H G+ HRD+KP N+L+ +KV DFG++ A+A + GT Y++PE
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 182 VISRRGYDGD-KADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKIAKADYKFPT----WF 235
RG D ++D++S G +LY +L G PF DS + Y+ + + D P+
Sbjct: 190 --QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV-REDPIPPSARHEGL 246
Query: 236 SADVRKLLSRILDPNPSTRISIAKIMENPWFR--KGLNSKSAKSKTAIKESSLV 287
SAD+ ++ + L NP R A M R G ++ K T + +SL+
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLL 300
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 209
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD ++ F S +
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-------GQVFFRQRVSXE 262
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 263 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 294
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 210
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD ++ F S +
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-------GQVFFRQRVSXE 263
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L PS R + +I +PW + L
Sbjct: 264 CQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 295
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 131/262 (50%), Gaps = 19/262 (7%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
L ++G G F KVY A +G +V + ++ ++E + +++HPN++
Sbjct: 11 LEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDIS-QTIENVRQEAKLFAMLKHPNII 69
Query: 74 QIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVY-- 131
+ V + + VME+A+GG L + +S ++ D + Q+ +++ H +
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPI 129
Query: 132 -HRDLKPENLLL---DENG-----MLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEV 182
HRDLK N+L+ ENG +LK+TDFG LA+ H+ + + G A++APEV
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFG---LAREWHRTTKM-SAAGAYAWMAPEV 185
Query: 183 ISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIA--KADYKFPTWFSADVR 240
I R +D+WS GV+L+ LL G +PF + +A+ +A K P+
Sbjct: 186 I-RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFA 244
Query: 241 KLLSRILDPNPSTRISIAKIME 262
KL+ +P+P +R S I++
Sbjct: 245 KLMEDCWNPDPHSRPSFTNILD 266
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 118/239 (49%), Gaps = 24/239 (10%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELF----KKVSKGK---- 105
+D+ +EI M HPN++ Y K +++ VM+ GG + V+KG+
Sbjct: 52 MDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG 111
Query: 106 -LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCK-- 162
L E T ++++ +++ H G HRD+K N+LL E+G +++ DFG+SA
Sbjct: 112 VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD 171
Query: 163 -HQDGLLHTTCGTPAYVAPEVISR-RGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAM 220
++ + T GTP ++APEV+ + RGYD KADIWS G+ L G P+H M +
Sbjct: 172 ITRNKVRKTFVGTPCWMAPEVMEQVRGYDF-KADIWSFGITAIELATGAAPYHKYPPMKV 230
Query: 221 YR----------KIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFRKG 269
+ D + + RK++S L +P R + A+++ + +F+K
Sbjct: 231 LMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 42/293 (14%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
MQKYE +G+G + V+ A++ T + V G+ REI +++ ++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK 59
Query: 69 HPNVMQIYEVMASKTKIYFVMEYA-KGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHS 127
H N++++++V+ S K+ V E+ + + + G L + + + QL+ + FCHS
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSAL----AKCKHQDGLLHTTCGTPAYVAPEVI 183
R V HRDLKP+NLL++ NG LK+ DFGL+ +C + + T Y P+V+
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV------TLWYRPPDVL 173
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFH-----DSNLMAMYRKIAK------------ 226
D+WS G I L P D L ++R +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 227 ADYK-FPTW------------FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
DYK +P + +A R LL +L NP RIS + +++P+F
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR---EISVM 64
L +Y++G LLG G F VY + V G + R E+ ++
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 65 RLIQH--PNVMQIYEVMASKTKIYFVMEYAKG-GELFKKVS-KGKLKEDTARKYFQQLIS 120
+ + V+++ + ++E + +LF ++ +G L+E+ AR +F Q++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 121 AIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
A+ CH+ GV HRD+K EN+L+D N G LK+ DFG AL K D + GT Y
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 197
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADYKFPTWFSAD 238
PE I Y G A +WS G++LY ++ G +PF HD +I + F S +
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQVFFRQRVSXE 250
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
+ L+ L P R + +I +PW + L
Sbjct: 251 CQHLIRWCLALRPXDRPTFEEIQNHPWMQDVL 282
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 26/276 (9%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQS-VXXXXXXXXXXLKVG--LVDQTKREISVMR 65
M + + R++G+G F +VY R TG+ +K G L + +S++
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDF 124
P ++ + + K+ F+++ GG+L +S+ G E R Y ++I ++
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 306
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
H+R V +RDLKP N+LLDE+G ++++D GL+ C H + GT Y+APEV+
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQ 362
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPF--------HDSNLMAMYRKIAKADYKFPTWFS 236
+ AD +S G +L+ LL G+ PF H+ + M + + + P FS
Sbjct: 363 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-----ELPDSFS 417
Query: 237 ADVRKLLSRILDPNPSTRISI-----AKIMENPWFR 267
++R LL +L + + R+ ++ E+P+FR
Sbjct: 418 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 453
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 17/294 (5%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
L +YELG +LG G ++V+ AR L + V + +RE +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 68 QHPNVMQIYEVMASKTKI----YFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAI 122
HP ++ +Y+ ++T Y VMEY G L V ++G + A + A+
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS-ALAKCKHQDGLLHTTCGTPAYVAPE 181
+F H G+ HRD+KP N+++ +KV DFG++ A+A + GT Y++PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 182 VISRRGYDGD-KADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKIAKADYKFPT----WF 235
RG D ++D++S G +LY +L G PF DS + Y+ + + D P+
Sbjct: 190 --QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV-REDPIPPSARHEGL 246
Query: 236 SADVRKLLSRILDPNPSTRISIAKIMENPWFR--KGLNSKSAKSKTAIKESSLV 287
SAD+ ++ + L NP R A M R G ++ K T + +SL+
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLL 300
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 26/276 (9%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQS-VXXXXXXXXXXLKVG--LVDQTKREISVMR 65
M + + R++G+G F +VY R TG+ +K G L + +S++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDF 124
P ++ + + K+ F+++ GG+L +S+ G E R Y ++I ++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
H+R V +RDLKP N+LLDE+G ++++D GL+ C H + GT Y+APEV+
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQ 363
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPF--------HDSNLMAMYRKIAKADYKFPTWFS 236
+ AD +S G +L+ LL G+ PF H+ + M + + + P FS
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-----ELPDSFS 418
Query: 237 ADVRKLLSRILDPNPSTRISI-----AKIMENPWFR 267
++R LL +L + + R+ ++ E+P+FR
Sbjct: 419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 26/276 (9%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQS-VXXXXXXXXXXLKVG--LVDQTKREISVMR 65
M + + R++G+G F +VY R TG+ +K G L + +S++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDF 124
P ++ + + K+ F+++ GG+L +S+ G E R Y ++I ++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
H+R V +RDLKP N+LLDE+G ++++D GL+ C H + GT Y+APEV+
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQ 363
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPF--------HDSNLMAMYRKIAKADYKFPTWFS 236
+ AD +S G +L+ LL G+ PF H+ + M + + + P FS
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-----ELPDSFS 418
Query: 237 ADVRKLLSRILDPNPSTRISI-----AKIMENPWFR 267
++R LL +L + + R+ ++ E+P+FR
Sbjct: 419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 26/276 (9%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQS-VXXXXXXXXXXLKVG--LVDQTKREISVMR 65
M + + R++G+G F +VY R TG+ +K G L + +S++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDF 124
P ++ + + K+ F+++ GG+L +S+ G E R Y ++I ++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
H+R V +RDLKP N+LLDE+G ++++D GL+ C H + GT Y+APEV+
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQ 363
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPF--------HDSNLMAMYRKIAKADYKFPTWFS 236
+ AD +S G +L+ LL G+ PF H+ + M + + + P FS
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-----ELPDSFS 418
Query: 237 ADVRKLLSRILDPNPSTRISI-----AKIMENPWFR 267
++R LL +L + + R+ ++ E+P+FR
Sbjct: 419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 17/294 (5%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
L +YELG +LG G ++V+ AR L + V + +RE +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 68 QHPNVMQIYEVMASKTKI----YFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAI 122
HP ++ +Y+ ++T Y VMEY G L V ++G + A + A+
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS-ALAKCKHQDGLLHTTCGTPAYVAPE 181
+F H G+ HRD+KP N+++ +KV DFG++ A+A + GT Y++PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 182 VISRRGYDGD-KADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKIAKADYKFPT----WF 235
RG D ++D++S G +LY +L G PF DS + Y+ + + D P+
Sbjct: 190 --QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV-REDPIPPSARHEGL 246
Query: 236 SADVRKLLSRILDPNPSTRISIAKIMENPWFR--KGLNSKSAKSKTAIKESSLV 287
SAD+ ++ + L NP R A M R G ++ K T + +SL+
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLL 300
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 135/294 (45%), Gaps = 17/294 (5%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
L +YELG +LG G ++V+ AR L + V + +RE +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 68 QHPNVMQIYEVMASKTKI----YFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAI 122
HP ++ +Y ++T Y VMEY G L V ++G + A + A+
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS-ALAKCKHQDGLLHTTCGTPAYVAPE 181
+F H G+ HRD+KP N+++ +KV DFG++ A+A + GT Y++PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 182 VISRRGYDGD-KADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKIAKADYKFPT----WF 235
RG D ++D++S G +LY +L G PF DS + Y+ + + D P+
Sbjct: 190 --QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV-REDPIPPSARHEGL 246
Query: 236 SADVRKLLSRILDPNPSTRISIAKIMENPWFR--KGLNSKSAKSKTAIKESSLV 287
SAD+ ++ + L NP R A M R G ++ K T + +SL+
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLL 300
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 130/258 (50%), Gaps = 19/258 (7%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE-----ISVMRLIQHPNV 72
+G+G+ V A TG+ V K+ L Q +RE + +MR H NV
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVK--------KMDLRKQQRRELLFNEVVIMRDYHHDNV 104
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYH 132
+ +Y +++ VME+ +GG L V+ ++ E+ ++ A+ + H++GV H
Sbjct: 105 VDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIH 164
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDK 192
RD+K +++LL +G +K++DFG A+ + GTP ++APEVISR Y G +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVGTPYWMAPEVISRLPY-GTE 221
Query: 193 ADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKA---DYKFPTWFSADVRKLLSRILDP 249
DIWS G+++ ++ G P+ + + R+I + K S+ +R L +L
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVR 281
Query: 250 NPSTRISIAKIMENPWFR 267
PS R + +++ +P+ +
Sbjct: 282 EPSQRATAQELLGHPFLK 299
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 126/272 (46%), Gaps = 15/272 (5%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
L +YELG +LG G ++V+ AR L + V + +RE +
Sbjct: 27 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 86
Query: 68 QHPNVMQIYEVMASKTKI----YFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAI 122
HP ++ +Y+ ++T Y VMEY G L V ++G + A + A+
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 146
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS-ALAKCKHQDGLLHTTCGTPAYVAPE 181
+F H G+ HRD+KP N+++ +KV DFG++ A+A + GT Y++PE
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 206
Query: 182 VISRRGYDGD-KADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKIAKADYKFPT----WF 235
RG D ++D++S G +LY +L G PF DS + Y+ + + D P+
Sbjct: 207 --QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV-REDPIPPSARHEGL 263
Query: 236 SADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
SAD+ ++ + L NP R A M R
Sbjct: 264 SADLDAVVLKALAKNPENRYQTAAEMRADLVR 295
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 42/293 (14%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
MQKYE +G+G + V+ A++ T + V G+ REI +++ ++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK 59
Query: 69 HPNVMQIYEVMASKTKIYFVMEYA-KGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHS 127
H N++++++V+ S K+ V E+ + + + G L + + + QL+ + FCHS
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSAL----AKCKHQDGLLHTTCGTPAYVAPEVI 183
R V HRDLKP+NLL++ NG LK+ +FGL+ +C + + T Y P+V+
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV------TLWYRPPDVL 173
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFH-----DSNLMAMYRKIAK------------ 226
D+WS G I L P D L ++R +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 227 ADYK-FPTW------------FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
DYK +P + +A R LL +L NP RIS + +++P+F
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 135/294 (45%), Gaps = 17/294 (5%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
L +YELG +LG G ++V+ AR L + V + +RE +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 68 QHPNVMQIYEVMASKTKI----YFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAI 122
HP ++ +Y+ ++T Y VMEY G L V ++G + A + A+
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS-ALAKCKHQDGLLHTTCGTPAYVAPE 181
+F H G+ HRD+KP N+++ +KV DFG++ A+A + GT Y++PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 182 VISRRGYDGD-KADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKIAKADYKFPT----WF 235
RG D ++D++S G +LY +L G PF DS Y+ + + D P+
Sbjct: 190 --QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHV-REDPIPPSARHEGL 246
Query: 236 SADVRKLLSRILDPNPSTRISIAKIMENPWFR--KGLNSKSAKSKTAIKESSLV 287
SAD+ ++ + L NP R A M R G ++ K T + +SL+
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLL 300
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 13/257 (5%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG+G++ VY A H TGQ V L+ + +EIS+M+ P+V++ Y
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-----EIIKEISIMQQCDSPHVVKYYG 91
Query: 78 VMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYHRDL 135
T ++ VMEY G + ++ L ED Q + +++ H HRD+
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDI 151
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
K N+LL+ G K+ DFG++ + + GTP ++APEVI GY+ ADI
Sbjct: 152 KAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNC-VADI 208
Query: 196 WSCGVILYVLLAGYLPFHDSNLMA---MYRKIAKADYKFPTWFSADVRKLLSRILDPNPS 252
WS G+ + G P+ D + M M ++ P +S + + + L +P
Sbjct: 209 WSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPE 268
Query: 253 TRISIAKIMENPWFRKG 269
R + +++++P+ R
Sbjct: 269 QRATATQLLQHPFVRSA 285
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 142/297 (47%), Gaps = 48/297 (16%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+KY +G+G + VY A++ G++ + G+ T REIS+++ ++
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDE-GIPSTTIREISILKELK 58
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKK---VSKGKLKEDTARKYFQQLISAIDFC 125
H N++++Y+V+ +K ++ V E+ + KK V +G L+ TA+ + QL++ I +C
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLD--QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLS-----ALAKCKHQDGLLHTTCGTPAYVAP 180
H R V HRDLKP+NLL++ G LK+ DFGL+ + K H+ T Y AP
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE-------VVTLWYRAP 169
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPF----HDSNLMAMYR-------------- 222
+V+ DIWS G I ++ G F LM ++R
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229
Query: 223 KIAKADYKFPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
++ K D F + LLS++L +P+ RI+ + +E+ +F++
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 142/297 (47%), Gaps = 48/297 (16%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+KY +G+G + VY A++ G++ + G+ T REIS+++ ++
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDE-GIPSTTIREISILKELK 58
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKK---VSKGKLKEDTARKYFQQLISAIDFC 125
H N++++Y+V+ +K ++ V E+ + KK V +G L+ TA+ + QL++ I +C
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLD--QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLS-----ALAKCKHQDGLLHTTCGTPAYVAP 180
H R V HRDLKP+NLL++ G LK+ DFGL+ + K H+ T Y AP
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE-------VVTLWYRAP 169
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPF----HDSNLMAMYR-------------- 222
+V+ DIWS G I ++ G F LM ++R
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229
Query: 223 KIAKADYKFPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
++ K D F + LLS++L +P+ RI+ + +E+ +F++
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 142/297 (47%), Gaps = 48/297 (16%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+KY +G+G + VY A++ G++ + G+ T REIS+++ ++
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDE-GIPSTTIREISILKELK 58
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKK---VSKGKLKEDTARKYFQQLISAIDFC 125
H N++++Y+V+ +K ++ V E+ + KK V +G L+ TA+ + QL++ I +C
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHLD--QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLS-----ALAKCKHQDGLLHTTCGTPAYVAP 180
H R V HRDLKP+NLL++ G LK+ DFGL+ + K H+ T Y AP
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE-------IVTLWYRAP 169
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPF----HDSNLMAMYR-------------- 222
+V+ DIWS G I ++ G F LM ++R
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229
Query: 223 KIAKADYKFPTW-----------FSADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
++ K D F + LLS++L +P+ RI+ + +E+ +F++
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 96/178 (53%), Gaps = 14/178 (7%)
Query: 96 ELFKKVS-KGKLKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDEN-GMLKVTDF 153
+LF ++ +G L+E+ AR +F Q++ A+ CH+ GV HRD+K EN+L+D N G LK+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 154 GLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPF- 212
G AL K D + GT Y PE I Y G A +WS G++LY ++ G +PF
Sbjct: 203 GSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
Query: 213 HDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFRKGL 270
HD +I + F S++ + L+ L PS R + +I +PW + L
Sbjct: 259 HDE-------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 309
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 126/293 (43%), Gaps = 52/293 (17%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG G +A VY + TG V + G REIS+M+ ++H N++++Y+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR-------KYFQ-QLISAIDFCHSRG 129
V+ ++ K+ V E+ KK + +T R KYFQ QL+ + FCH
Sbjct: 71 VIHTENKLTLVFEFMDND--LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD 189
+ HRDLKP+NLL+++ G LK+ DFGL+ + T Y AP+V+
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT--FSSEVVTLWYRAPDVLMGSRTY 186
Query: 190 GDKADIWSCGVILYVLLAG--------------------------------YLPFHDSNL 217
DIWSCG IL ++ G LP ++ N+
Sbjct: 187 STSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNI 246
Query: 218 MAM----YRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
R++ + K P ++ L +L NP R+S + + +PWF
Sbjct: 247 QQRPPRDLRQVLQPHTKEP--LDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 117/247 (47%), Gaps = 8/247 (3%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM 64
GK++ ++Y++ LG G + VY A V K + + +RE+
Sbjct: 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNS 65
Query: 65 RLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAID 123
+ H N++ + +V Y VMEY +G L + + S G L DTA + Q++ I
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIK 125
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT--CGTPAYVAPE 181
H + HRD+KP+N+L+D N LK+ DFG +AK + L T GT Y +PE
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSNKTLKIFDFG---IAKALSETSLTQTNHVLGTVQYFSPE 182
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAM-YRKIAKADYKFPTWFSADVR 240
D + DI+S G++LY +L G PF+ +++ + I + T D+
Sbjct: 183 QAKGEATD-ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIP 241
Query: 241 KLLSRIL 247
+ LS ++
Sbjct: 242 QSLSNVI 248
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 144/288 (50%), Gaps = 24/288 (8%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
+E+ LG G F KVY A++ T SV + L D EI ++ HPN
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKET--SVLAAAKVIDTKSEEELEDYM-VEIDILASCDHPN 95
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK--LKEDTARKYFQQLISAIDFCHSRG 129
++++ + + ++ ++E+ GG + + + + L E + +Q + A+++ H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSA--LAKCKHQDGLLHTTCGTPAYVAPEVI---- 183
+ HRDLK N+L +G +K+ DFG+SA + +D + GTP ++APEV+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI----GTPYWMAPEVVMCET 211
Query: 184 -SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKAD---YKFPTWFSADV 239
R YD KAD+WS G+ L + P H+ N M + KIAK++ P+ +S++
Sbjct: 212 SKDRPYDY-KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWF----RKGLNSKSAKSKTAIKE 283
+ L + L+ N R + ++++++P+ K + A++K + E
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAEVTE 318
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 44/230 (19%)
Query: 56 QTKREISV-MRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVS-KG--KLK 107
+ +RE+ + R Q P++++I +V A + + VME GGELF ++ +G
Sbjct: 56 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 115
Query: 108 EDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDE---NGMLKVTDFGLSALAKCKHQ 164
E A + + + AI + HS + HRD+KPENLL N +LK+TDFG
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF--------- 166
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMA----M 220
A E + YD D+WS GVI+Y+LL GY PF+ ++ +A M
Sbjct: 167 --------------AKETTGEK-YD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 210
Query: 221 YRKIAKADYKFPT--W--FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+I Y+FP W S +V+ L+ +L P+ R++I + M +PW
Sbjct: 211 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 144/288 (50%), Gaps = 24/288 (8%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
+E+ LG G F KVY A++ T SV + L D EI ++ HPN
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKET--SVLAAAKVIDTKSEEELEDYM-VEIDILASCDHPN 95
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK--LKEDTARKYFQQLISAIDFCHSRG 129
++++ + + ++ ++E+ GG + + + + L E + +Q + A+++ H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSA--LAKCKHQDGLLHTTCGTPAYVAPEVI---- 183
+ HRDLK N+L +G +K+ DFG+SA + +D + GTP ++APEV+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI----GTPYWMAPEVVMCET 211
Query: 184 -SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKAD---YKFPTWFSADV 239
R YD KAD+WS G+ L + P H+ N M + KIAK++ P+ +S++
Sbjct: 212 SKDRPYDY-KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWF----RKGLNSKSAKSKTAIKE 283
+ L + L+ N R + ++++++P+ K + A++K + E
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAEVTE 318
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 144/288 (50%), Gaps = 24/288 (8%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
+E+ LG G F KVY A++ T SV + L D EI ++ HPN
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKET--SVLAAAKVIDTKSEEELEDYM-VEIDILASCDHPN 95
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK--LKEDTARKYFQQLISAIDFCHSRG 129
++++ + + ++ ++E+ GG + + + + L E + +Q + A+++ H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSA--LAKCKHQDGLLHTTCGTPAYVAPEVI---- 183
+ HRDLK N+L +G +K+ DFG+SA + +D + GTP ++APEV+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI----GTPYWMAPEVVMCET 211
Query: 184 -SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKAD---YKFPTWFSADV 239
R YD KAD+WS G+ L + P H+ N M + KIAK++ P+ +S++
Sbjct: 212 SKDRPYDY-KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWF----RKGLNSKSAKSKTAIKE 283
+ L + L+ N R + ++++++P+ K + A++K + E
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKAEVTE 318
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 19/260 (7%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
+E+ +++G+G F++V + TGQ LK G V + E V+
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTARKYFQQLISAIDFCHSRG 129
+ Q++ + +Y VMEY GG+L +SK ++ + AR Y +++ AID H G
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT--TCGTPAYVAPEVIS--- 184
HRD+KP+N+LLD G +++ DFG S L DG + + GTP Y++PE++
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFG-SCLK--LRADGTVRSLVAVGTPDYLSPEILQAVG 239
Query: 185 ---RRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIA--KADYKFP---TWFS 236
G G + D W+ GV Y + G PF+ + Y KI K P
Sbjct: 240 GGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVP 299
Query: 237 ADVRKLLSRILDPNPSTRIS 256
+ R + R+L P P TR+
Sbjct: 300 EEARDFIQRLLCP-PETRLG 318
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 130/295 (44%), Gaps = 41/295 (13%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR---L 66
Q+YE +G+G + KV+ AR L G + G+ T RE++V+R
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 67 IQHPNVMQIYEVMA-----SKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLI 119
+HPNV+++++V +TK+ V E+ KV + + +T + QL+
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 120 SAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
+DF HS V HRDLKP+N+L+ +G +K+ DFGL+ + + L + T Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYRA 187
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSN----------------------- 216
PEV+ + Y D+WS G I + F S+
Sbjct: 188 PEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 217 ----LMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
A + K A+ KF T + LL + L NP+ RIS + +P+F+
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 130/295 (44%), Gaps = 41/295 (13%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR---L 66
Q+YE +G+G + KV+ AR L G + G+ T RE++V+R
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 67 IQHPNVMQIYEVMA-----SKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLI 119
+HPNV+++++V +TK+ V E+ KV + + +T + QL+
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 120 SAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
+DF HS V HRDLKP+N+L+ +G +K+ DFGL+ + + L + T Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYRA 187
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSN----------------------- 216
PEV+ + Y D+WS G I + F S+
Sbjct: 188 PEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 217 ----LMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
A + K A+ KF T + LL + L NP+ RIS + +P+F+
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 130/295 (44%), Gaps = 41/295 (13%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR---L 66
Q+YE +G+G + KV+ AR L G + G+ T RE++V+R
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 67 IQHPNVMQIYEVMA-----SKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLI 119
+HPNV+++++V +TK+ V E+ KV + + +T + QL+
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 120 SAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVA 179
+DF HS V HRDLKP+N+L+ +G +K+ DFGL+ + + L + T Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYRA 187
Query: 180 PEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSN----------------------- 216
PEV+ + Y D+WS G I + F S+
Sbjct: 188 PEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 217 ----LMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
A + K A+ KF T + LL + L NP+ RIS + +P+F+
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 8/209 (3%)
Query: 58 KREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQ 117
++EI+V+ P V + Y TK++ +MEY GG + G L E ++
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILRE 112
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
++ +D+ HS HRD+K N+LL E+G +K+ DFG++ + +T GTP +
Sbjct: 113 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFW 170
Query: 178 VAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTW--- 234
+APEVI + YD KADIWS G+ L G P + + M + I K + PT
Sbjct: 171 MAPEVIKQSAYDS-KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--PTLEGN 227
Query: 235 FSADVRKLLSRILDPNPSTRISIAKIMEN 263
+S +++ + L+ PS R + +++++
Sbjct: 228 YSKPLKEFVEACLNKEPSFRPTAKELLKH 256
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 8/209 (3%)
Query: 58 KREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQ 117
++EI+V+ P V + Y TK++ +MEY GG + G L E ++
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILRE 132
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
++ +D+ HS HRD+K N+LL E+G +K+ DFG++ + +T GTP +
Sbjct: 133 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFW 190
Query: 178 VAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTW--- 234
+APEVI + YD KADIWS G+ L G P + + M + I K + PT
Sbjct: 191 MAPEVIKQSAYDS-KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--PTLEGN 247
Query: 235 FSADVRKLLSRILDPNPSTRISIAKIMEN 263
+S +++ + L+ PS R + +++++
Sbjct: 248 YSKPLKEFVEACLNKEPSFRPTAKELLKH 276
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 26/283 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR-LIQHP 70
+EL L+G G + +VY RH+ TGQ + ++ K+EI++++ H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE----EEIKQEINMLKKYSHHR 81
Query: 71 NVMQIYEVMASKT------KIYFVMEYAKGG---ELFKKVSKGKLKEDTARKYFQQLISA 121
N+ Y K +++ VME+ G +L K LKE+ ++++
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 122 IDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
+ H V HRD+K +N+LL EN +K+ DFG+S A+ G +T GTP ++APE
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIGTPYWMAPE 199
Query: 182 VIS-----RRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK---ADYKFPT 233
VI+ YD K+D+WS G+ + G P D + M I + K
Sbjct: 200 VIACDENPDATYDF-KSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK 258
Query: 234 WFSADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAK 276
W S + + L N S R + ++M++P+ R N + +
Sbjct: 259 W-SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVR 300
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 137/267 (51%), Gaps = 22/267 (8%)
Query: 13 ELGRLLGQ-GNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
+ ++G+ G+F KVY A++ T SV + L D EI ++ HPN
Sbjct: 12 DFWEIIGELGDFGKVYKAQNKET--SVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPN 68
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK--LKEDTARKYFQQLISAIDFCHSRG 129
++++ + + ++ ++E+ GG + + + + L E + +Q + A+++ H
Sbjct: 69 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 128
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSA---LAKCKHQDGLLHTTCGTPAYVAPEVI--- 183
+ HRDLK N+L +G +K+ DFG+SA + +D + GTP ++APEV+
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI----GTPYWMAPEVVMCE 184
Query: 184 --SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKAD---YKFPTWFSAD 238
R YD KAD+WS G+ L + P H+ N M + KIAK++ P+ +S++
Sbjct: 185 TSKDRPYDY-KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSN 243
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
+ L + L+ N R + ++++++P+
Sbjct: 244 FKDFLKKCLEKNVDARWTTSQLLQHPF 270
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 8/209 (3%)
Query: 58 KREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQ 117
++EI+V+ P V + Y TK++ +MEY GG + G L E ++
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILRE 127
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
++ +D+ HS HRD+K N+LL E+G +K+ DFG++ + + GTP +
Sbjct: 128 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFW 185
Query: 178 VAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTW--- 234
+APEVI + YD KADIWS G+ L G P + + M + I K + PT
Sbjct: 186 MAPEVIKQSAYDS-KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--PTLEGN 242
Query: 235 FSADVRKLLSRILDPNPSTRISIAKIMEN 263
+S +++ + L+ PS R + +++++
Sbjct: 243 YSKPLKEFVEACLNKEPSFRPTAKELLKH 271
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 8/209 (3%)
Query: 58 KREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQ 117
++EI+V+ P V + Y TK++ +MEY GG + G L E ++
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILRE 112
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
++ +D+ HS HRD+K N+LL E+G +K+ DFG++ + + GTP +
Sbjct: 113 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFW 170
Query: 178 VAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTW--- 234
+APEVI + YD KADIWS G+ L G P + + M + I K + PT
Sbjct: 171 MAPEVIKQSAYDS-KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--PTLEGN 227
Query: 235 FSADVRKLLSRILDPNPSTRISIAKIMEN 263
+S +++ + L+ PS R + +++++
Sbjct: 228 YSKPLKEFVEACLNKEPSFRPTAKELLKH 256
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 143/323 (44%), Gaps = 52/323 (16%)
Query: 10 QKYELG-------RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS 62
Q ELG R+L +G FA VY A+ +G+G+ K + Q E+
Sbjct: 21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQ---EVC 77
Query: 63 VMR-LIQHPNVMQIY--------EVMASKTKIYFVMEYAKGG--ELFKKV-SKGKLKEDT 110
M+ L HPN++Q E + + + E KG E KK+ S+G L DT
Sbjct: 78 FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDT 137
Query: 111 ARKYFQQLISAIDFCHSR--GVYHRDLKPENLLLDENGMLKVTDFG------------LS 156
K F Q A+ H + + HRDLK ENLLL G +K+ DFG S
Sbjct: 138 VLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWS 197
Query: 157 ALAKCKHQDGLLHTTCGTPAYVAPEVISRRGY--DGDKADIWSCGVILYVLLAGYLPFHD 214
A + ++ + T TP Y PE+I G+K DIW+ G ILY+L PF D
Sbjct: 198 AQRRALVEEEITRNT--TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255
Query: 215 SNLMAMYRKIAKADYKFP---TWFSADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLN 271
+ +I Y P T ++ L+ +L NP R+SIA+++ ++
Sbjct: 256 GAKL----RIVNGKYSIPPHDTQYTV-FHSLIRAMLQVNPEERLSIAEVVHQ--LQEIAA 308
Query: 272 SKSAKSKTAIKESSLVDVDAAFG 294
+++ K+ I E L++ + +G
Sbjct: 309 ARNVNPKSPITE--LLEQNGGYG 329
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 12/259 (4%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
+G+G+F +V+ T Q V Q +EI+V+ V + Y
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSSYVTKYYG 88
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYHRDLKP 137
+K++ +MEY GG + G E ++++ +D+ HS HRD+K
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKA 148
Query: 138 ENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWS 197
N+LL E G +K+ DFG++ + +T GTP ++APEVI + YD KADIWS
Sbjct: 149 ANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDS-KADIWS 205
Query: 198 CGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTW---FSADVRKLLSRILDPNPSTR 254
G+ L G P D + M + I K + PT F+ ++ + L+ +PS R
Sbjct: 206 LGITAIELAKGEPPNSDMHPMRVLFLIPKNNP--PTLVGDFTKSFKEFIDACLNKDPSFR 263
Query: 255 ISIAKIMENPWFRKGLNSK 273
+ +++++ + K NSK
Sbjct: 264 PTAKELLKHKFIVK--NSK 280
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 134/301 (44%), Gaps = 48/301 (15%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++L LLG+G + V A H TG+ V L +T REI +++ +H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFAL--RTLREIKILKHFKHEN 70
Query: 72 VMQIYEVMASKT-----KIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
++ I+ + + ++Y + E + +L + +S L +D + + Q + A+ H
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSAL--------AKCKHQDGLLHTTCGTPAYV 178
V HRDLKP NLL++ N LKV DFGL+ + ++ Q + T Y
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 179 APEVISRRGYDGDKADIWSCGVIL------------------YVLLAGYL--PFHDSNLM 218
APEV+ D+WSCG IL +L+ G + P D++L
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 219 AMYRKIAKADYK-FPTWFSADVRK-----------LLSRILDPNPSTRISIAKIMENPWF 266
+ A+ K P + +A + K LL R+L +P+ RI+ + +E+P+
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Query: 267 R 267
+
Sbjct: 310 Q 310
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 107/218 (49%), Gaps = 8/218 (3%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQ--SVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
++YE LG+G FA VY AR T Q ++ K G+ REI +++ +
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGG-ELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++ + + K+ I V ++ + E+ K + L + Y + +++ H
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
+ HRDLKP NLLLDENG+LK+ DFGL+ ++ H T Y APE++
Sbjct: 130 QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AYXHQVV-TRWYRAPELLFGA 187
Query: 187 GYDGDKADIWSCGVILYVLL--AGYLPFHDSNLMAMYR 222
G D+W+ G IL LL +LP DS+L + R
Sbjct: 188 RMYGVGVDMWAVGCILAELLLRVPFLP-GDSDLDQLTR 224
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 50/302 (16%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++L LLG+G + V A H TG+ V L +T REI +++ +H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFAL--RTLREIKILKHFKHEN 70
Query: 72 VMQIYEVMASKT-----KIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
++ I+ + + ++Y + E + +L + +S L +D + + Q + A+ H
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSAL---------AKCKHQDGLLHTTCGTPAY 177
V HRDLKP NLL++ N LKV DFGL+ + Q G++ T Y
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV-ATRWY 188
Query: 178 VAPEVISRRGYDGDKADIWSCGVIL------------------YVLLAGYL--PFHDSNL 217
APEV+ D+WSCG IL +L+ G + P D++L
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 218 MAMYRKIAKADYK-FPTWFSADVRK-----------LLSRILDPNPSTRISIAKIMENPW 265
+ A+ K P + +A + K LL R+L +P+ RI+ + +E+P+
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 266 FR 267
+
Sbjct: 309 LQ 310
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 134/301 (44%), Gaps = 48/301 (15%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++L LLG+G + V A H TG+ V L +T REI +++ +H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFAL--RTLREIKILKHFKHEN 70
Query: 72 VMQIYEVMASKT-----KIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
++ I+ + + ++Y + E + +L + +S L +D + + Q + A+ H
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSAL--------AKCKHQDGLLHTTCGTPAYV 178
V HRDLKP NLL++ N LKV DFGL+ + ++ Q + T Y
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 179 APEVISRRGYDGDKADIWSCGVIL------------------YVLLAGYL--PFHDSNLM 218
APEV+ D+WSCG IL +L+ G + P D++L
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 219 AMYRKIAKADYK-FPTWFSADVRK-----------LLSRILDPNPSTRISIAKIMENPWF 266
+ A+ K P + +A + K LL R+L +P+ RI+ + +E+P+
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Query: 267 R 267
+
Sbjct: 310 Q 310
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 30/269 (11%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR-----EISVMRLIQH-PN 71
LG+G FA V TGQ LK Q R EI+V+ L + P
Sbjct: 37 LGRGKFAVVRQCISKSTGQE------YAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPR 90
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKV---SKGKLKEDTARKYFQQLISAIDFCHSR 128
V+ ++EV + ++I ++EYA GGE+F + E+ + +Q++ + + H
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150
Query: 129 GVYHRDLKPENLLLDEN---GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISR 185
+ H DLKP+N+LL G +K+ DFG+S K H L GTP Y+APE+++
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMS--RKIGHA-CELREIMGTPEYLAPEILN- 206
Query: 186 RGYD--GDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK--ADYKFPTWFSAD--V 239
YD D+W+ G+I Y+LL PF + Y I++ DY T+ S
Sbjct: 207 --YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLA 264
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWFRK 268
+ +L NP R + + + W ++
Sbjct: 265 TDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
LM+KY+ +G+G + VY A+ G+ V + G+ REIS+++ +
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDE-GIPSTAIREISLLKEL 76
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV---SKGKLKEDTARKYFQQLISAIDF 124
HPN++ + +V+ S+ + V E+ + KKV +K L++ + Y QL+ +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
CH + HRDLKP+NLL++ +G LK+ DFGL A A H T Y AP+V+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGL-ARAFGIPVRSYTHEVV-TLWYRAPDVLM 192
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPF----HDSNLMAMYRKIAKADYK-------FPT 233
DIWS G I ++ G F D L ++ + + + P
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252
Query: 234 W-------------------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
W F + LLS +L +P+ RIS M +P+F+
Sbjct: 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
LM+KY+ +G+G + VY A+ G+ V + G+ REIS+++ +
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDE-GIPSTAIREISLLKEL 76
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV---SKGKLKEDTARKYFQQLISAIDF 124
HPN++ + +V+ S+ + V E+ + KKV +K L++ + Y QL+ +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
CH + HRDLKP+NLL++ +G LK+ DFGL A A H T Y AP+V+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGL-ARAFGIPVRSYTHEVV-TLWYRAPDVLM 192
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPF----HDSNLMAMYRKIAKADYK-------FPT 233
DIWS G I ++ G F D L ++ + + + P
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252
Query: 234 W-------------------FSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
W F + LLS +L +P+ RIS M +P+F+
Sbjct: 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 41/294 (13%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI 67
+M+KYE +G+G++ V+ R+ TGQ V V + REI +++ +
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPV-IKKIALREIRMLKQL 59
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFC 125
+HPN++ + EV K +++ V EY L + +G + E + Q + A++FC
Sbjct: 60 KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG-VPEHLVKSITWQTLQAVNFC 118
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISR 185
H HRD+KPEN+L+ ++ ++K+ DFG + L T Y +PE++
Sbjct: 119 HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDYYDDEVATRWYRSPELLVG 176
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPF----HDSNLMAMYRK------------------ 223
G D+W+ G + LL+G +P D + + + RK
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235
Query: 224 -----------IAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+ + KFP S LL L +P+ R++ +++ +P+F
Sbjct: 236 FSGVKIPDPEDMEPLELKFPN-ISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 51/260 (19%)
Query: 15 GRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQHP 70
G +LG+G F + H TG+ + + ++T+R E+ VMR ++HP
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKEL-------IRFDEETQRTFLKEVKVMRCLEHP 67
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLI-------SAID 123
NV++ V+ ++ F+ EY KGG L +G +K ++ + Q + S +
Sbjct: 68 NVLKFIGVLYKDKRLNFITEYIKGGTL-----RGIIKSMDSQYPWSQRVSFAKDIASGMA 122
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALA--KCKHQDGL----------LHTT 171
+ HS + HRDL N L+ EN + V DFGL+ L + +GL +T
Sbjct: 123 YLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 172 CGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF 231
G P ++APE+I+ R YD +K D++S G++L ++ R A DY
Sbjct: 183 VGNPYWMAPEMINGRSYD-EKVDVFSFGIVLCEIIG--------------RVNADPDYLP 227
Query: 232 PTW-FSADVRKLLSRILDPN 250
T F +VR L R PN
Sbjct: 228 RTMDFGLNVRGFLDRYCPPN 247
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 13/219 (5%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M+KYE L+G+G++ V R+ TG+ V K+ + REI +++ ++
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKM-VKKIAMREIKLLKQLR 82
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG-----ELFKKVSKGKLKEDTARKYFQQLISAID 123
H N++ + EV K + Y V E+ ELF L +KY Q+I+ I
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP----NGLDYQVVQKYLFQIINGIG 138
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
FCHS + HRD+KPEN+L+ ++G++K+ DFG + + + T Y APE++
Sbjct: 139 FCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELL 196
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMY 221
G D+W+ G ++ + G F DS++ +Y
Sbjct: 197 VGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
+G+G+F +VY T + V Q +EI+V+ P + + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYITRYFG 84
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYHRDLKP 137
TK++ +MEY GG + G L+E ++++ +D+ HS HRD+K
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKA 144
Query: 138 ENLLLDENGMLKVTDFGLSA-LAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIW 196
N+LL E G +K+ DFG++ L + + GTP ++APEVI + YD KADIW
Sbjct: 145 ANVLLSEQGDVKLADFGVAGQLTDTQIKRNXF---VGTPFWMAPEVIKQSAYDF-KADIW 200
Query: 197 SCGVILYVLLAGYLPFHDSNLMAMYRKIAK 226
S G+ L G P D + M + I K
Sbjct: 201 SLGITAIELAKGEPPNSDLHPMRVLFLIPK 230
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 26/276 (9%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
+LG+G + VY R L + EI++ + ++H N++Q
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR---YSQPLHEEIALHKHLKHKNIVQYL 85
Query: 77 EVMASKTKIYFVMEYAKGGEL--FKKVSKGKLK--EDTARKYFQQLISAIDFCHSRGVYH 132
+ I ME GG L + G LK E T Y +Q++ + + H + H
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 133 RDLKPENLLLDE-NGMLKVTDFG----LSALAKCKHQDGLLHTTCGTPAYVAPEVISR-- 185
RD+K +N+L++ +G+LK++DFG L+ + C T GT Y+APE+I +
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT------ETFTGTLQYMAPEIIDKGP 199
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPFHD--SNLMAMYR-KIAKADYKFPTWFSADVRKL 242
RGY G ADIWS G + + G PF++ AM++ + K + P SA+ +
Sbjct: 200 RGY-GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 258
Query: 243 LSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSK 278
+ + +P+P R ++ + + + ++SK K++
Sbjct: 259 ILKCFEPDPDKRACANDLLVDEFLK--VSSKKKKTQ 292
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 24/265 (9%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
+LG+G + VY R L + EI++ + ++H N++Q
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR---YSQPLHEEIALHKHLKHKNIVQYL 71
Query: 77 EVMASKTKIYFVMEYAKGGEL--FKKVSKGKLK--EDTARKYFQQLISAIDFCHSRGVYH 132
+ I ME GG L + G LK E T Y +Q++ + + H + H
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 133 RDLKPENLLLDE-NGMLKVTDFG----LSALAKCKHQDGLLHTTCGTPAYVAPEVISR-- 185
RD+K +N+L++ +G+LK++DFG L+ + C T GT Y+APE+I +
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT------ETFTGTLQYMAPEIIDKGP 185
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPFHD--SNLMAMYR-KIAKADYKFPTWFSADVRKL 242
RGY G ADIWS G + + G PF++ AM++ + K + P SA+ +
Sbjct: 186 RGY-GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAF 244
Query: 243 LSRILDPNPSTRISIAKIMENPWFR 267
+ + +P+P R ++ + + +
Sbjct: 245 ILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 67 IQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKE--DTARKYFQQLISAIDF 124
++ N ++ + K+ ++ MEY + G L+ + L + D + F+Q++ A+ +
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSA-------LAKCKHQD-----GLLHTTC 172
HS+G+ HRDLKP N+ +DE+ +K+ DFGL+ + K Q+ L +
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDS-NLMAMYRKIAKADYKF 231
GT YVA EV+ G+ +K D++S G+I + ++ PF + + +K+ +F
Sbjct: 192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKLRSVSIEF 248
Query: 232 PTWFSAD----VRKLLSRILDPNPSTRISIAKIMENPWF 266
P F + +K++ ++D +P+ R ++ + W
Sbjct: 249 PPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%), Gaps = 31/282 (10%)
Query: 8 LMQKYELGRL----------LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQT 57
L QK ++G L LG GN V+ H +G + +K + +Q
Sbjct: 13 LTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSG--LVMARKLIHLEIKPAIRNQI 70
Query: 58 KREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQ 116
RE+ V+ P ++ Y S +I ME+ GG L + + K G++ E K
Sbjct: 71 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 130
Query: 117 QLISAIDFCHSR-GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP 175
+I + + + + HRD+KP N+L++ G +K+ DFG+S + D + ++ GT
Sbjct: 131 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTR 186
Query: 176 AYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPF-HDSNLMAMYRKIAKADY----- 229
+Y++PE + Y ++DIWS G+ L + G P S MA++ + DY
Sbjct: 187 SYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL---DYIVNEP 242
Query: 230 --KFPTW-FSADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
K P+ FS + + +++ L NP+ R + ++M + + ++
Sbjct: 243 PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 284
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 20/256 (7%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
+G G+F V+ A G+ +V +V ++ RE+++M+ ++HPN++
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV---NEFLREVAIMKRLRHPNIVLFMG 101
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSKGKLKE--DTARKYFQ--QLISAIDFCHSRG--VY 131
+ + V EY G L++ + K +E D R+ + +++ H+R +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 132 HRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGD 191
HRDLK NLL+D+ +KV DFGLS L GTP ++APEV+ R +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS--KXAAGTPEWMAPEVL-RDEPSNE 218
Query: 192 KADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYK-----FPTWFSADVRKLLSRI 246
K+D++S GVIL+ L P+ + N + +A +K P + V ++
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQV---VAAVGFKCKRLEIPRNLNPQVAAIIEGC 275
Query: 247 LDPNPSTRISIAKIME 262
P R S A IM+
Sbjct: 276 WTNEPWKRPSFATIMD 291
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 130/283 (45%), Gaps = 24/283 (8%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
M KG++ Y + + +G G +KV+ L + + +D + E
Sbjct: 23 MSVKGRI----YSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNE 76
Query: 61 ISVM-RLIQHPN-VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK-YFQQ 117
I+ + +L QH + ++++Y+ + IY VME +L + K K + RK Y++
Sbjct: 77 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN 135
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
++ A+ H G+ H DLKP N L+ +GMLK+ DFG++ + + + GT Y
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 194
Query: 178 VAPEVISRRGYDGDKA----------DIWSCGVILYVLLAGYLPFHD-SNLMAMYRKIAK 226
+ PE I + D+WS G ILY + G PF N ++ I
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254
Query: 227 ADY--KFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
++ +FP D++ +L L +P RISI +++ +P+ +
Sbjct: 255 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 130/283 (45%), Gaps = 24/283 (8%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
M KG++ Y + + +G G +KV+ L + + +D + E
Sbjct: 23 MSVKGRI----YSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNE 76
Query: 61 ISVM-RLIQHPN-VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK-YFQQ 117
I+ + +L QH + ++++Y+ + IY VME +L + K K + RK Y++
Sbjct: 77 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN 135
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
++ A+ H G+ H DLKP N L+ +GMLK+ DFG++ + + + GT Y
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNY 194
Query: 178 VAPEVISRRGYDGDKA----------DIWSCGVILYVLLAGYLPFHD-SNLMAMYRKIAK 226
+ PE I + D+WS G ILY + G PF N ++ I
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254
Query: 227 ADY--KFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
++ +FP D++ +L L +P RISI +++ +P+ +
Sbjct: 255 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K +++ + G +L+K + L D
Sbjct: 87 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHI 146
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 206
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 207 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 244
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 50/290 (17%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG+G + +VY A T ++V + G+ RE+S+++ +QH N++++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYHRDLK 136
V+ +++ + EYA+ +L K + K + + + QLI+ ++FCHSR HRDLK
Sbjct: 101 VIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLK 159
Query: 137 PENLLL-----DENGMLKVTDFGLS-----ALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
P+NLLL E +LK+ DFGL+ + + H+ T Y PE++
Sbjct: 160 PQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE-------IITLWYRPPEILLGS 212
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYRKI---------------AKADYK 230
+ DIWS I +L F DS + +++ A D+K
Sbjct: 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWK 272
Query: 231 --FPTWFSADVRKLL------------SRILDPNPSTRISIAKIMENPWF 266
FP + ++++L + +L+ +P RIS +E+P+F
Sbjct: 273 QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 20/256 (7%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
+G G+F V+ A G+ +V +V ++ RE+++M+ ++HPN++
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV---NEFLREVAIMKRLRHPNIVLFMG 101
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSKGKLKE--DTARKYFQ--QLISAIDFCHSRG--VY 131
+ + V EY G L++ + K +E D R+ + +++ H+R +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 132 HRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGD 191
HR+LK NLL+D+ +KV DFGLS L + GTP ++APEV+ R +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS--KSAAGTPEWMAPEVL-RDEPSNE 218
Query: 192 KADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYK-----FPTWFSADVRKLLSRI 246
K+D++S GVIL+ L P+ + N + +A +K P + V ++
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQV---VAAVGFKCKRLEIPRNLNPQVAAIIEGC 275
Query: 247 LDPNPSTRISIAKIME 262
P R S A IM+
Sbjct: 276 WTNEPWKRPSFATIMD 291
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL C+H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGL-----CRHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ KYE +GQG F +V+ ARH TGQ V K G REI +++L++
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK 74
Query: 69 HPNVMQIYEVMASKTK--------IYFVMEYAK---GGELFKKVSKGKLKEDTARKYFQQ 117
H NV+ + E+ +K IY V ++ + G L + K L E ++ Q
Sbjct: 75 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQM 132
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS---ALAKCKHQDGLLHTTCGT 174
L++ + + H + HRD+K N+L+ +G+LK+ DFGL+ +LAK Q T
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK-NSQPNRYXNRVVT 191
Query: 175 PAYVAPE-VISRRGYDGDKADIWSCGVIL 202
Y PE ++ R Y G D+W G I+
Sbjct: 192 LWYRPPELLLGERDY-GPPIDLWGAGCIM 219
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ KYE +GQG F +V+ ARH TGQ V K G REI +++L++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK 75
Query: 69 HPNVMQIYEVMASKTK--------IYFVMEYAK---GGELFKKVSKGKLKEDTARKYFQQ 117
H NV+ + E+ +K IY V ++ + G L + K L E ++ Q
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQM 133
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS---ALAKCKHQDGLLHTTCGT 174
L++ + + H + HRD+K N+L+ +G+LK+ DFGL+ +LAK Q T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK-NSQPNRYXNRVVT 192
Query: 175 PAYVAPE-VISRRGYDGDKADIWSCGVIL 202
Y PE ++ R Y G D+W G I+
Sbjct: 193 LWYRPPELLLGERDY-GPPIDLWGAGCIM 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 130/283 (45%), Gaps = 24/283 (8%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
+ KG++ Y + + +G G +KV+ L + + +D + E
Sbjct: 51 ISVKGRI----YSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNE 104
Query: 61 ISVM-RLIQHPN-VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK-YFQQ 117
I+ + +L QH + ++++Y+ + IY VME +L + K K + RK Y++
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN 163
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
++ A+ H G+ H DLKP N L+ +GMLK+ DFG++ + + + GT Y
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 178 VAPEVISRRGYDGDKA----------DIWSCGVILYVLLAGYLPFHD-SNLMAMYRKIAK 226
+ PE I + D+WS G ILY + G PF N ++ I
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
Query: 227 ADY--KFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
++ +FP D++ +L L +P RISI +++ +P+ +
Sbjct: 283 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 17/270 (6%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQI 75
R+LG+G F +V + TG+ K E ++ + V+ +
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 76 YEVMASKTKIYFVMEYAKGGEL---FKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYH 132
+K + V+ GG+L + + E A Y ++ ++ H + +
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDK 192
RDLKPEN+LLD++G ++++D GL+ + + GT Y+APEV+ Y
Sbjct: 310 RDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVGTVGYMAPEVVKNERYTFS- 365
Query: 193 ADIWSCGVILYVLLAGYLPFHDS----NLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
D W+ G +LY ++AG PF + R + + ++ FS R L S++L
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLC 425
Query: 249 PNPSTRI-----SIAKIMENPWFRKGLNSK 273
+P+ R+ S ++ E+P F+K LN K
Sbjct: 426 KDPAERLGCRGGSAREVKEHPLFKK-LNFK 454
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 108/250 (43%), Gaps = 17/250 (6%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQI 75
R +G G+F VY+AR + + V +E+ ++ ++HPN +Q
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 76 YEVMASKTKIYFVMEYAKG-GELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYHRD 134
+ + VMEY G +V K L+E + + + HS + HRD
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 140
Query: 135 LKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI---SRRGYDGD 191
+K N+LL E G++K+ DFG +++ + GTP ++APEVI YDG
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQYDG- 193
Query: 192 KADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADY------KFPTWFSADVRKLLSR 245
K D+WS G+ L P + N M+ IA+ + + +F V L +
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK 253
Query: 246 ILDPNPSTRI 255
I P++ +
Sbjct: 254 IPQDRPTSEV 263
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y ++E+ G L + + +E +A
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 170
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 171 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 228
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y ++E+ G L + + +E A
Sbjct: 54 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV 113
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 114 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA--HA 171
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 172 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 229
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 230 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ KYE +GQG F +V+ ARH TGQ V K G REI +++L++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK 75
Query: 69 HPNVMQIYEVMASKTK--------IYFVMEYAK---GGELFKKVSKGKLKEDTARKYFQQ 117
H NV+ + E+ +K IY V ++ + G L + K L E ++ Q
Sbjct: 76 HENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQM 133
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS---ALAKCKHQDGLLHTTCGT 174
L++ + + H + HRD+K N+L+ +G+LK+ DFGL+ +LAK Q T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK-NSQPNRYXNRVVT 192
Query: 175 PAYVAPE-VISRRGYDGDKADIWSCGVIL 202
Y PE ++ R Y G D+W G I+
Sbjct: 193 LWYRPPELLLGERDY-GPPIDLWGAGCIM 220
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 108/250 (43%), Gaps = 17/250 (6%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQI 75
R +G G+F VY+AR + + V +E+ ++ ++HPN +Q
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 76 YEVMASKTKIYFVMEYAKG-GELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYHRD 134
+ + VMEY G +V K L+E + + + HS + HRD
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 179
Query: 135 LKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI---SRRGYDGD 191
+K N+LL E G++K+ DFG +++ + GTP ++APEVI YDG
Sbjct: 180 VKAGNILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDG- 232
Query: 192 KADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADY------KFPTWFSADVRKLLSR 245
K D+WS G+ L P + N M+ IA+ + + +F V L +
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK 292
Query: 246 ILDPNPSTRI 255
I P++ +
Sbjct: 293 IPQDRPTSEV 302
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
+ KYE +GQG F +V+ ARH TGQ V K G REI +++L++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLK 75
Query: 69 HPNVMQIYEVMASKTK--------IYFVMEYAK---GGELFKKVSKGKLKEDTARKYFQQ 117
H NV+ + E+ +K IY V ++ + G L + K L E ++ Q
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQM 133
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS---ALAKCKHQDGLLHTTCGT 174
L++ + + H + HRD+K N+L+ +G+LK+ DFGL+ +LAK Q T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK-NSQPNRYXNRVVT 192
Query: 175 PAYVAPE-VISRRGYDGDKADIWSCGVIL 202
Y PE ++ R Y G D+W G I+
Sbjct: 193 LWYRPPELLLGERDY-GPPIDLWGAGCIM 220
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y ++E+ G L + + +E +A
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 170
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 171 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 228
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 67 IQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKE--DTARKYFQQLISAIDF 124
++ N ++ + K+ ++ MEY + L+ + L + D + F+Q++ A+ +
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSA-------LAKCKHQD-----GLLHTTC 172
HS+G+ HRDLKP N+ +DE+ +K+ DFGL+ + K Q+ L +
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDS-NLMAMYRKIAKADYKF 231
GT YVA EV+ G+ +K D++S G+I + ++ PF + + +K+ +F
Sbjct: 192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILKKLRSVSIEF 248
Query: 232 PTWFSAD----VRKLLSRILDPNPSTRISIAKIMENPWF 266
P F + +K++ ++D +P+ R ++ + W
Sbjct: 249 PPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 17/270 (6%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQI 75
R+LG+G F +V + TG+ K E ++ + V+ +
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 76 YEVMASKTKIYFVMEYAKGGEL---FKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYH 132
+K + V+ GG+L + + E A Y ++ ++ H + +
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDK 192
RDLKPEN+LLD++G ++++D GL+ + + GT Y+APEV+ Y
Sbjct: 310 RDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVGTVGYMAPEVVKNERYTFS- 365
Query: 193 ADIWSCGVILYVLLAGYLPFHDS----NLMAMYRKIAKADYKFPTWFSADVRKLLSRILD 248
D W+ G +LY ++AG PF + R + + ++ FS R L S++L
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLC 425
Query: 249 PNPSTRI-----SIAKIMENPWFRKGLNSK 273
+P+ R+ S ++ E+P F+K LN K
Sbjct: 426 KDPAERLGCRGGSAREVKEHPLFKK-LNFK 454
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
+E+ LG G F V H TG+ V K ++ EI +M+ + HPN
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR--ERWCLEIQIMKKLNHPN 73
Query: 72 VMQIYEV------MASKTKIYFVMEYAKGGELFKKVSKGK----LKEDTARKYFQQLISA 121
V+ EV +A MEY +GG+L K +++ + LKE R + SA
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 122 IDFCHSRGVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
+ + H + HRDLKPEN++L + + K+ D G AK Q L GT Y+
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG---YAKELDQGELCTEFVGTLQYL 190
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPF 212
APE++ ++ Y D WS G + + + G+ PF
Sbjct: 191 APELLEQKKYTV-TVDYWSFGTLAFECITGFRPF 223
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 130/283 (45%), Gaps = 24/283 (8%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
+ KG++ Y + + +G G +KV+ L + + +D + E
Sbjct: 51 ISVKGRI----YSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNE 104
Query: 61 ISVM-RLIQHPN-VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK-YFQQ 117
I+ + +L QH + ++++Y+ + IY VME +L + K K + RK Y++
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN 163
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
++ A+ H G+ H DLKP N L+ +GMLK+ DFG++ + + + GT Y
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 178 VAPEVISRRGYDGDKA----------DIWSCGVILYVLLAGYLPFHD-SNLMAMYRKIAK 226
+ PE I + D+WS G ILY + G PF N ++ I
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
Query: 227 ADY--KFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
++ +FP D++ +L L +P RISI +++ +P+ +
Sbjct: 283 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
+E+ LG G F V H TG+ V K ++ EI +M+ + HPN
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR--ERWCLEIQIMKKLNHPN 74
Query: 72 VMQIYEV------MASKTKIYFVMEYAKGGELFKKVSKGK----LKEDTARKYFQQLISA 121
V+ EV +A MEY +GG+L K +++ + LKE R + SA
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 122 IDFCHSRGVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
+ + H + HRDLKPEN++L + + K+ D G AK Q L GT Y+
Sbjct: 135 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG---YAKELDQGELCTEFVGTLQYL 191
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPF 212
APE++ ++ Y D WS G + + + G+ PF
Sbjct: 192 APELLEQKKYTV-TVDYWSFGTLAFECITGFRPF 224
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 130/283 (45%), Gaps = 24/283 (8%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
+ KG++ Y + + +G G +KV+ L + + +D + E
Sbjct: 4 ISVKGRI----YSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNE 57
Query: 61 ISVM-RLIQHPN-VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK-YFQQ 117
I+ + +L QH + ++++Y+ + IY VME +L + K K + RK Y++
Sbjct: 58 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN 116
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
++ A+ H G+ H DLKP N L+ +GMLK+ DFG++ + + + GT Y
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 175
Query: 178 VAPEVISRRGYDGDKA----------DIWSCGVILYVLLAGYLPFHD-SNLMAMYRKIAK 226
+ PE I + D+WS G ILY + G PF N ++ I
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 235
Query: 227 ADY--KFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
++ +FP D++ +L L +P RISI +++ +P+ +
Sbjct: 236 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ-- 68
+YE +G G + VY AR +G V + GL T RE++++R ++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNG-EEGLPISTVREVALLRRLEAF 63
Query: 69 -HPNVMQIYEVMAS-----KTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLIS 120
HPNV+++ +V A+ + K+ V E+ K L +T + +Q +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
+DF H+ + HRDLKPEN+L+ G +K+ DFG LA+ L T Y AP
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFG---LARIYSYQMALDPVVVTLWYRAP 180
Query: 181 EVISRRGYDGDKADIWSCGVIL 202
EV+ + Y D+WS G I
Sbjct: 181 EVLLQSTY-ATPVDMWSVGCIF 201
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 24/303 (7%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
+ KG++ Y + + +G G +KV+ L + + +D + E
Sbjct: 7 ISVKGRI----YSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNE 60
Query: 61 ISVM-RLIQHPN-VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK-YFQQ 117
I+ + +L QH + ++++Y+ + IY VME +L + K K + RK Y++
Sbjct: 61 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN 119
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
++ A+ H G+ H DLKP N L+ +GMLK+ DFG++ + + + GT Y
Sbjct: 120 MLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 178
Query: 178 VAPEVISRRGYDGDKA----------DIWSCGVILYVLLAGYLPFHD-SNLMAMYRKIAK 226
+ PE I + D+WS G ILY + G PF N ++ I
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 238
Query: 227 ADY--KFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAIKES 284
++ +FP D++ +L L +P RISI +++ +P+ + + + +K +E
Sbjct: 239 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEM 298
Query: 285 SLV 287
V
Sbjct: 299 KYV 301
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 9/160 (5%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT-----KIYFVMEYAKGGELFKKVSKGKLKEDT 110
+T REI ++ +H NV+ I +++ + T +Y V + + +L+K + +L D
Sbjct: 87 RTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKSQQLSNDH 145
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLH 169
+ Q++ + + HS V HRDLKP NLL++ LK+ DFGL+ +A +H G L
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLT 205
Query: 170 TTCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 206 EXVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 244
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ-- 68
+YE +G G + VY AR +G V + GL T RE++++R ++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNG-EEGLPISTVREVALLRRLEAF 63
Query: 69 -HPNVMQIYEVMAS-----KTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLIS 120
HPNV+++ +V A+ + K+ V E+ K L +T + +Q +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
+DF H+ + HRDLKPEN+L+ G +K+ DFG LA+ L T Y AP
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFG---LARIYSYQMALFPVVVTLWYRAP 180
Query: 181 EVISRRGYDGDKADIWSCGVIL 202
EV+ + Y D+WS G I
Sbjct: 181 EVLLQSTY-ATPVDMWSVGCIF 201
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ-- 68
+YE +G G + VY AR +G V + GL T RE++++R ++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNG-EEGLPISTVREVALLRRLEAF 63
Query: 69 -HPNVMQIYEVMAS-----KTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLIS 120
HPNV+++ +V A+ + K+ V E+ K L +T + +Q +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
+DF H+ + HRDLKPEN+L+ G +K+ DFG LA+ L T Y AP
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFG---LARIYSYQMALAPVVVTLWYRAP 180
Query: 181 EVISRRGYDGDKADIWSCGVIL 202
EV+ + Y D+WS G I
Sbjct: 181 EVLLQSTY-ATPVDMWSVGCIF 201
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y ++E+ G L + + +E A
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVV 117
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 175
Query: 171 TCGTPA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 176 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 233
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 24/303 (7%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
+ KG++ Y + + +G G +KV+ L + + +D + E
Sbjct: 3 ISVKGRI----YSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNE 56
Query: 61 ISVM-RLIQHPN-VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK-YFQQ 117
I+ + +L QH + ++++Y+ + IY VME +L + K K + RK Y++
Sbjct: 57 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN 115
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
++ A+ H G+ H DLKP N L+ +GMLK+ DFG++ + + + GT Y
Sbjct: 116 MLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 174
Query: 178 VAPEVISRRGYDGDKA----------DIWSCGVILYVLLAGYLPFHD-SNLMAMYRKIAK 226
+ PE I + D+WS G ILY + G PF N ++ I
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 234
Query: 227 ADY--KFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAIKES 284
++ +FP D++ +L L +P RISI +++ +P+ + + + +K +E
Sbjct: 235 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEM 294
Query: 285 SLV 287
V
Sbjct: 295 KYV 297
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E +A
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 170
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 171 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 228
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E +A
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 117
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 175
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 176 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 233
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E +A
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 112
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 170
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 171 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 228
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 116/266 (43%), Gaps = 17/266 (6%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQI 75
R+LG+G F +V+ + TG+ K E ++ + ++ +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKV-----SKGKLKEDTARKYFQQLISAIDFCHSRGV 130
+KT + VM GG++ + +E A Y Q++S ++ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
+RDLKPEN+LLD++G ++++D GL+ K GTP ++APE++ YD
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDF 368
Query: 191 DKADIWSCGVILYVLLAGYLPFHDSNLMA----MYRKIAKADYKFPTWFSADVRKLLSRI 246
D ++ GV LY ++A PF + +++ + +P FS + +
Sbjct: 369 -SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 247 LDPNPSTRI-----SIAKIMENPWFR 267
L +P R+ S + +P FR
Sbjct: 428 LQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 117
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA--HA 175
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 176 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 233
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 116/266 (43%), Gaps = 17/266 (6%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQI 75
R+LG+G F +V+ + TG+ K E ++ + ++ +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKV-----SKGKLKEDTARKYFQQLISAIDFCHSRGV 130
+KT + VM GG++ + +E A Y Q++S ++ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
+RDLKPEN+LLD++G ++++D GL+ K GTP ++APE++ YD
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDF 368
Query: 191 DKADIWSCGVILYVLLAGYLPFHDSNLMA----MYRKIAKADYKFPTWFSADVRKLLSRI 246
D ++ GV LY ++A PF + +++ + +P FS + +
Sbjct: 369 -SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 247 LDPNPSTRI-----SIAKIMENPWFR 267
L +P R+ S + +P FR
Sbjct: 428 LQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 116/266 (43%), Gaps = 17/266 (6%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQI 75
R+LG+G F +V+ + TG+ K E ++ + ++ +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKV-----SKGKLKEDTARKYFQQLISAIDFCHSRGV 130
+KT + VM GG++ + +E A Y Q++S ++ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
+RDLKPEN+LLD++G ++++D GL+ K GTP ++APE++ YD
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDF 368
Query: 191 DKADIWSCGVILYVLLAGYLPFHDSNLMA----MYRKIAKADYKFPTWFSADVRKLLSRI 246
D ++ GV LY ++A PF + +++ + +P FS + +
Sbjct: 369 -SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 247 LDPNPSTRI-----SIAKIMENPWFR 267
L +P R+ S + +P FR
Sbjct: 428 LQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 66 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 125
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 126 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 183
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 184 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 241
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 242 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 116/266 (43%), Gaps = 17/266 (6%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQI 75
R+LG+G F +V+ + TG+ K E ++ + ++ +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKV-----SKGKLKEDTARKYFQQLISAIDFCHSRGV 130
+KT + VM GG++ + +E A Y Q++S ++ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
+RDLKPEN+LLD++G ++++D GL+ K GTP ++APE++ YD
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDF 368
Query: 191 DKADIWSCGVILYVLLAGYLPFHDSNLMA----MYRKIAKADYKFPTWFSADVRKLLSRI 246
D ++ GV LY ++A PF + +++ + +P FS + +
Sbjct: 369 -SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 247 LDPNPSTRI-----SIAKIMENPWFR 267
L +P R+ S + +P FR
Sbjct: 428 LQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 114
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 115 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 172
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 173 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 230
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 231 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 117
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 175
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 176 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 233
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 114
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 115 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 172
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 173 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 230
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 231 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 57 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 116
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 117 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 174
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 175 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 232
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 233 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 117
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 175
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 176 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 233
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYAR--HLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS 62
G + +YE +G G + VY AR H G ++ GL T RE++
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63
Query: 63 VMRLIQ---HPNVMQIYEVMAS-----KTKIYFVMEYAKGG--ELFKKVSKGKLKEDTAR 112
++R ++ HPNV+++ +V A+ + K+ V E+ K L +T +
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 123
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
+Q + +DF H+ + HRDLKPEN+L+ G +K+ DFG LA+ L
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG---LARIYSYQMALTPVV 180
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVIL 202
T Y APEV+ + Y D+WS G I
Sbjct: 181 VTLWYRAPEVLLQSTY-ATPVDMWSVGCIF 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 112
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 170
Query: 171 TCGTPA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 171 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 228
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 69 RTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTE 188
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 189 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 226
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 112
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 170
Query: 171 TCGTPA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 171 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 228
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 23/220 (10%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 114
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L +
Sbjct: 115 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--------MTGD 166
Query: 171 TCGTPA-------YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
T PA + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y
Sbjct: 167 TYTAPAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
+ K DY+ P V +L+ NPS R S A+I
Sbjct: 226 LLEK-DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 23/220 (10%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 54 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 113
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L +
Sbjct: 114 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--------MTGD 165
Query: 171 TCGTPA-------YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
T PA + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y
Sbjct: 166 TYTAPAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 224
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
+ K DY+ P V +L+ NPS R S A+I
Sbjct: 225 LLEK-DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 71 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 190
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 191 XVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 228
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 72 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 131
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 132 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 191
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 192 XVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 67 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 187 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 224
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 67 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTE 186
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 187 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 224
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 59/299 (19%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQT--KREISVMRLIQH 69
Y +++G G+F V+ A+ + + + +K L D+ RE+ +MR+++H
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE----------VAIKKVLQDKRFKNRELQIMRIVKH 91
Query: 70 PNVMQI----YEVMASKTKIYF--VMEYAKGGELFKKVSK--GKLKEDTA----RKYFQQ 117
PNV+ + Y K +++ V+EY E + S+ KLK+ + Y Q
Sbjct: 92 PNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYRASRHYAKLKQTMPMLLIKLYMYQ 149
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA 176
L+ ++ + HS G+ HRD+KP+NLLLD +G+LK+ DFG + + + + C
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSXICSR-Y 206
Query: 177 YVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKA--------- 227
Y APE+I DIWS G ++ L+ G F + + +I K
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266
Query: 228 --------DYKFPTW----FS--------ADVRKLLSRILDPNPSTRISIAKIMENPWF 266
++KFP FS D L+SR+L+ PS R++ + + +P+F
Sbjct: 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 69 RTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 189 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 226
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 24/283 (8%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
+ KG++ Y + + +G G +KV+ L + + +D + E
Sbjct: 51 ISVKGRI----YSILKQIGSGGSSKVFQV--LNEKKQIYAIKYVNLEEADNQTLDSYRNE 104
Query: 61 ISVM-RLIQHPN-VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK-YFQQ 117
I+ + +L QH + ++++Y+ + IY VME +L + K K + RK Y++
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN 163
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
++ A+ H G+ H DLKP N L+ +GMLK+ DFG++ + + + G Y
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNY 222
Query: 178 VAPEVISRRGYDGDKA----------DIWSCGVILYVLLAGYLPFHD-SNLMAMYRKIAK 226
+ PE I + D+WS G ILY + G PF N ++ I
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
Query: 227 ADY--KFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFR 267
++ +FP D++ +L L +P RISI +++ +P+ +
Sbjct: 283 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 71 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 191 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 228
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 15/250 (6%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG G F +VY G + V++ +E +VM+ I+HPN++Q+
Sbjct: 19 LGGGQFGEVYE----GVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF---QQLISAIDFCHSRGVYHRD 134
V + Y + E+ G L + + +E +A Q+ SA+++ + HRD
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 135 LKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP-AYVAPEVISRRGYDGDKA 193
L N L+ EN ++KV DFGLS L H P + APE ++ + K+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTA--HAGAKFPIKWTAPESLAYNKF-SIKS 191
Query: 194 DIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKF--PTWFSADVRKLLSRILDPN 250
D+W+ GV+L+ + G P+ + +Y + K DY+ P V +L+ N
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-DYRMERPEGCPEKVYELMRACWQWN 250
Query: 251 PSTRISIAKI 260
PS R S A+I
Sbjct: 251 PSDRPSFAEI 260
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 67 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 187 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 224
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y ++E+ G L + + +E +A
Sbjct: 51 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVV 110
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 111 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA--HA 168
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ + +Y + K D
Sbjct: 169 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-D 226
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 227 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 67 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 187 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 224
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 71 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 191 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 228
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E +A
Sbjct: 260 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 319
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HR+L N L+ EN ++KV DFGLS L H
Sbjct: 320 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 377
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 378 GAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 435
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKIME 262
Y+ P V +L+ NPS R S A+I +
Sbjct: 436 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 71 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 191 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 69 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 128
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 189 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 75 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 134
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 135 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 194
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 195 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 232
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 67 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 126
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 187 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 224
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 72 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 131
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 132 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 191
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 192 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 65 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 124
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 125 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 185 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 222
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 21/265 (7%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG GN V+ H +G + +K + +Q RE+ V+ P ++ Y
Sbjct: 14 LGAGNGGVVFKVSHKPSG--LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRG-VYHRDL 135
S +I ME+ GG L + + K G++ E K +I + + + + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
KP N+L++ G +K+ DFG+S + D + ++ GT +Y++PE + Y ++DI
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 196 WSCGVILYVLLAGYLPFHDSNL-------MAMYRK----IAKADYKFPTW-FSADVRKLL 243
WS G+ L + G P + MA++ + + K P+ FS + + +
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 246
Query: 244 SRILDPNPSTRISIAKIMENPWFRK 268
++ L NP+ R + ++M + + ++
Sbjct: 247 NKCLIKNPAERADLKQLMVHAFIKR 271
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 73 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 132
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 133 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 192
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 193 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 230
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 64 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 123
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 124 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 183
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 184 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 221
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 71 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 130
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 191 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 228
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 87 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 146
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 206
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 207 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 244
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 65 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI 124
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 125 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 185 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 222
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 36/265 (13%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
L+G G F +V+ A+H G++ ++ +RE+ + + H N++
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYN 70
Query: 77 ---------------EVMASKTKIYFV-MEYAKGGELFKKVSK---GKLKEDTARKYFQQ 117
SKTK F+ ME+ G L + + K KL + A + F+Q
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
+ +D+ HS+ + +RDLKP N+ L + +K+ DFGL K DG + GT Y
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK---NDGKRXRSKGTLRY 187
Query: 178 VAPEVISRRGYDGDKADIWSCGVILYVLL-AGYLPFHDSNLMAMYRKIAKADYKFPTWFS 236
++PE IS + Y G + D+++ G+IL LL F S R +D F
Sbjct: 188 MSPEQISSQDY-GKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI-----FD 241
Query: 237 ADVRKLLSRILDPNPSTRISIAKIM 261
+ LL ++L P R + ++I+
Sbjct: 242 KKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 76
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKY 136
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DFGL+ +H D + T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 191
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 11/216 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 257 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 316
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HR+L N L+ EN ++KV DFGLS L H
Sbjct: 317 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 374
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 375 GAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 432
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKIME 262
Y+ P V +L+ NPS R S A+I +
Sbjct: 433 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 468
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTKI------YFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +++ +QH NV+ + +V + + Y VM + + +K+ K E+ +
Sbjct: 72 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEEKIQ 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ + + HS GV HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 130 YLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA-----RHADAEMTGYV 184
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKA 227
T Y APEVI + DIWS G I+ +L G F + + +I K
Sbjct: 185 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 239
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 120/255 (47%), Gaps = 11/255 (4%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG GN V+ H +G + +K + +Q RE+ V+ P ++ Y
Sbjct: 17 LGAGNGGVVFKVSHKPSG--LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRG-VYHRDL 135
S +I ME+ GG L + + K G++ E K +I + + + + HRD+
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 134
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
KP N+L++ G +K+ DFG+S + D + + GT +Y++PE + Y ++DI
Sbjct: 135 KPSNILVNSRGEIKLCDFGVSG----QLIDEMANEFVGTRSYMSPERLQGTHYS-VQSDI 189
Query: 196 WSCGVILYVLLAGYLPFHDSNLMAMYRKIA-KADYKFPTW-FSADVRKLLSRILDPNPST 253
WS G+ L + G P + + I + K P+ FS + + +++ L NP+
Sbjct: 190 WSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAE 249
Query: 254 RISIAKIMENPWFRK 268
R + ++M + + ++
Sbjct: 250 RADLKQLMVHAFIKR 264
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +++ ++H NV+ + +V T Y VM + G +L K + KL ED +
Sbjct: 73 RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQ 131
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ + + H+ G+ HRDLKP NL ++E+ LK+ DFGL+ + D +
Sbjct: 132 FLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA-----RQADSEMXGXV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFP 232
T Y APEVI DIWS G I+ ++ G F S+ + ++I K P
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 246
Query: 233 TWF 235
F
Sbjct: 247 AEF 249
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 11/216 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E A
Sbjct: 299 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 358
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HR+L N L+ EN ++KV DFGLS L H
Sbjct: 359 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA--HA 416
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K D
Sbjct: 417 GAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-D 474
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKIME 262
Y+ P V +L+ NPS R S A+I +
Sbjct: 475 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 510
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 100
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DFGL+ +H D + T Y APE++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMXGXVATRWYRAPEIML 215
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 20/220 (9%)
Query: 7 VLMQKYELGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
+ ++ E+G L+G+G F +VY+ R H + LK KRE+ R
Sbjct: 30 IPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKA-----FKREVMAYR 84
Query: 66 LIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDT--ARKYFQQLISAID 123
+H NV+ S + + KG L+ V K+ D R+ Q+++ +
Sbjct: 85 QTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMG 144
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGL---SALAKCKHQDGLLHTTCGTPAYVAP 180
+ H++G+ H+DLK +N+ D NG + +TDFGL S + + ++ L G ++AP
Sbjct: 145 YLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAP 203
Query: 181 EVISRRGYDGDK--------ADIWSCGVILYVLLAGYLPF 212
E+I + D ++ +D+++ G I Y L A PF
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+++ H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS GVI+ ++ G + F ++ + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSEAEA 332
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V T + +++ + G +L V KL +D
Sbjct: 96 RTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 155
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 156 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 210
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK 226
T Y APE++ + DIWS G I+ LL G F ++ + ++I +
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMR 266
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 41/305 (13%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPNVM 73
+G G +V+ R TG + + G ++ KR + V++ P ++
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMR-----RSGNKEENKRILMDLDVVLKSHDCPYIV 87
Query: 74 QIYEVMASKTKIYFVME-YAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR-GVY 131
Q + + T ++ ME E KK +G + E K ++ A+ + + GV
Sbjct: 88 QCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVI 147
Query: 132 HRDLKPENLLLDENGMLKVTDFGLSA-LAKCKHQDGLLHTTCGTPAYVAPEVI-----SR 185
HRD+KP N+LLDE G +K+ DFG+S L K +D + G AY+APE I ++
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD----RSAGCAAYMAPERIDPPDPTK 203
Query: 186 RGYDGDKADIWSCGVILYVLLAGYLPFHD--SNLMAMYRKIAKADYKFP--TWFSADVRK 241
YD +AD+WS G+ L L G P+ + ++ + + + + P FS D +
Sbjct: 204 PDYD-IRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQS 262
Query: 242 LLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAIKESSLVDVDAAFGPIENSAS 301
+ L + R K++E+ + IK ++VD A + A
Sbjct: 263 FVKDCLTKDHRKRPKYNKLLEHSF---------------IKRYETLEVDVASWFKDVMAK 307
Query: 302 TEAPR 306
TE+PR
Sbjct: 308 TESPR 312
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKT----KIYFVMEYAKGGELFKKVSKGKLKEDTA 111
+T REI ++ +H N++ I +++ + T K ++++ +L+K + L D
Sbjct: 71 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI 130
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKH-QDGLLHT 170
+ Q++ + + HS V HRDLKP NLLL+ LK+ DFGL+ +A H G L
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 171 TCGTPAYVAPEV-ISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE+ ++ +GY DIWS G IL +L+
Sbjct: 191 YVATRWYRAPEIMLNSKGY-TKSIDIWSVGCILAEMLSN 228
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 80
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRWYRAPEIML 195
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 76
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DFGL+ +H D + T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 191
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 80
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 80
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DFGL+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRWYRAPEIML 195
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 112/267 (41%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +++ + H N++ + V + +Y VME +V +L +
Sbjct: 72 RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFG LA+ + ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG---LARTACTNFMMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKI-------- 224
T Y APEVI GY + DIWS G I+ L+ G + F ++ + + K+
Sbjct: 187 VTRYYRAPEVILGMGYAAN-VDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPS 245
Query: 225 -----------------------AKADYKFPTWF-----------SADVRKLLSRILDPN 250
K + FP W ++ R LLS++L +
Sbjct: 246 AEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
P RIS+ + + +P+ + A++
Sbjct: 306 PDKRISVDEALRHPYITVWYDPAEAEA 332
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +++ + H N++ + V + +Y VME +V +L +
Sbjct: 70 RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMS 127
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFG LA+ + ++
Sbjct: 128 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG---LARTASTNFMMTPYV 184
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ L+ G + F ++ + + K+ +
Sbjct: 185 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 243
Query: 227 ADYK-------------------------FPTWF-----------SADVRKLLSRILDPN 250
A++ FP W ++ R LLS++L +
Sbjct: 244 AEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVID 303
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
P RIS+ + + +P+ + A++
Sbjct: 304 PDKRISVDEALRHPYITVWYDPAEAEA 330
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 76
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DFGL+ +H D + T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRWYRAPEIML 191
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+++ H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS GVI+ ++ G + F ++ + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSEAEA 332
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA-----RHTDDEMTG 187
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG +G+GNF +V+ R + L L + +E +++ HPN++
Sbjct: 118 LGEQIGRGNFGEVFSGRL--RADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 74 QIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVY 131
++ V K IY VME +GG+ F + +L+ T + + +++ S+
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 132 HRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG---TPA-YVAPEVISRRG 187
HRDL N L+ E +LK++DFG+S + DG+ + G P + APE ++
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 188 YDGDKADIWSCGVILY 203
Y + +D+WS G++L+
Sbjct: 292 YSSE-SDVWSFGILLW 306
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA-----RHTDDEMTG 183
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 86
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 146
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DFGL+ +H D + T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 201
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 90
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 150
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DFGL+ +H D + T Y APE++
Sbjct: 151 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 205
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 100
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 160
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DFGL+ +H D + T Y APE++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 215
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG +G+GNF +V+ R + L L + +E +++ HPN++
Sbjct: 118 LGEQIGRGNFGEVFSGRL--RADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 74 QIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVY 131
++ V K IY VME +GG+ F + +L+ T + + +++ S+
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 132 HRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG---TPA-YVAPEVISRRG 187
HRDL N L+ E +LK++DFG+S + DG+ + G P + APE ++
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 188 YDGDKADIWSCGVILY 203
Y + +D+WS G++L+
Sbjct: 292 YSSE-SDVWSFGILLW 306
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTKI------YFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +++ +QH NV+ + +V + + Y VM + + +K+ + E+ +
Sbjct: 90 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGMEFSEEKIQ 147
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ + + HS GV HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 148 YLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA-----RHADAEMTGYV 202
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKA 227
T Y APEVI + DIWS G I+ +L G F + + +I K
Sbjct: 203 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 257
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 11/214 (5%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK 113
V++ +E +VM+ I+HPN++Q+ V + Y + E+ G L + + +E +A
Sbjct: 51 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVV 110
Query: 114 YF---QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
Q+ SA+++ + HRDL N L+ EN ++KV DFGLS L H
Sbjct: 111 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTA--HA 168
Query: 171 TCGTP-AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
P + APE ++ + K+D+W+ GV+L+ + G P+ + +Y + K D
Sbjct: 169 GAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-D 226
Query: 229 YKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
Y+ P V +L+ NPS R S A+I
Sbjct: 227 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 99
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 159
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DFGL+ +H D + T Y APE++
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 214
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 85
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DFGL+ +H D + T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLA-----RHTDDEMTGYVATRWYRAPEIML 200
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 90 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 149
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 150 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMXG 204
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 186
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 183
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA-----RHTDDEMTG 186
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 122
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 123 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 177
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 64 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 123
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 124 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 178
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 188
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 131
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 132 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 186
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 79 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 138
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 193
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 66 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 125
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 126 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 180
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 181 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 187
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 64 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 123
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 124 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 178
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 90 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 149
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 150 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 204
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 78 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 137
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 138 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA-----RHTDDEMTG 192
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 183
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 79 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 138
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 193
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 79 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 138
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 193
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 65 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 124
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 125 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 179
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 128
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 129 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 183
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 78 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 137
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 138 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 192
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 132
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 133 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 187
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 146
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 147 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 201
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 86 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 145
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H D +
Sbjct: 146 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMTG 200
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V T I +++ G +L V L ++
Sbjct: 73 RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEH 132
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ QL+ + + HS G+ HRDLKP N+ ++E+ L++ DFGL+ + D +
Sbjct: 133 VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA-----RQADEEMTG 187
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKI 224
T Y APE++ + DIWS G I+ LL G F S+ + ++I
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 22/265 (8%)
Query: 9 MQKYELGRL-------LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI 61
M K+E+ R LG G + +VY +G + V++ +E
Sbjct: 24 MDKWEMERTDITMKHKLGGGQYGEVY----VGVWKKYSLTVAVKTLKEDTMEVEEFLKEA 79
Query: 62 SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF---QQL 118
+VM+ I+HPN++Q+ V + Y V EY G L + + +E TA Q+
Sbjct: 80 AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQI 139
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-Y 177
SA+++ + HRDL N L+ EN ++KV DFGLS L H P +
Sbjct: 140 SSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTA--HAGAKFPIKW 197
Query: 178 VAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKF--PTW 234
APE ++ + K+D+W+ GV+L+ + G P+ +L +Y + K Y+ P
Sbjct: 198 TAPESLAYNTFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKG-YRMEQPEG 255
Query: 235 FSADVRKLLSRILDPNPSTRISIAK 259
V +L+ +P+ R S A+
Sbjct: 256 CPPKVYELMRACWKWSPADRPSFAE 280
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 126/283 (44%), Gaps = 41/283 (14%)
Query: 17 LLGQGNFAKVYYARH-LGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQI 75
+LGQG F +V AR+ L + L L E+ ++ + H V++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL-----SEVXLLASLNHQYVVRY 67
Query: 76 Y-------------EVMASKTKIYFVMEYAKGGELFKKVSKGKLKE--DTARKYFQQLIS 120
Y + K+ ++ EY + L+ + L + D + F+Q++
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSA-------LAKCKHQD-----GLL 168
A+ + HS+G+ HR+LKP N+ +DE+ +K+ DFGL+ + K Q+ L
Sbjct: 128 ALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 169 HTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDS-NLMAMYRKIAKA 227
+ GT YVA EV+ G+ +K D +S G+I + + PF + + +K+
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILKKLRSV 244
Query: 228 DYKFPTWFSAD----VRKLLSRILDPNPSTRISIAKIMENPWF 266
+FP F + +K++ ++D +P+ R ++ + W
Sbjct: 245 SIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 49/278 (17%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
L+G G F +V+ A+H G++ ++ +RE+ + + H N++
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN-------EKAEREVKALAKLDHVNIVHYN 71
Query: 77 ----------------------------EVMASKTKIYFV-MEYAKGGELFKKVSK---G 104
SKTK F+ ME+ G L + + K
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 105 KLKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQ 164
KL + A + F+Q+ +D+ HS+ + HRDLKP N+ L + +K+ DFGL K
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK---N 188
Query: 165 DGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLL-AGYLPFHDSNLMAMYRK 223
DG + GT Y++PE IS + Y G + D+++ G+IL LL F S R
Sbjct: 189 DGKRTRSKGTLRYMSPEQISSQDY-GKEVDLYALGLILAELLHVCDTAFETSKFFTDLRD 247
Query: 224 IAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIM 261
+D F + LL ++L P R + ++I+
Sbjct: 248 GIISDI-----FDKKEKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 16 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 70
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++K ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 71 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 129
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
HRDLK N+ L E+ +K+ DFGL+ + G+ ++APEVI R D
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI--RMQDS 187
Query: 191 D----KADIWSCGVILYVLLAGYLPFHDSN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLPYSNIN 217
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+++ H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ G + F ++ + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSEAEA 332
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+++ H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ G + F ++ + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSEAEA 332
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ D+GL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASK--------------TKIYFVMEYAKGGELFK 99
V REI ++R + H N+++++E++ +Y V EY + +L
Sbjct: 52 VKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLAN 110
Query: 100 KVSKGKLKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSAL 158
+ +G L E+ AR + QL+ + + HS V HRDLKP NL ++ E+ +LK+ DFGL+ +
Sbjct: 111 VLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
Query: 159 AKCKH-QDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNL 217
+ G L T Y +P ++ D+W+ G I +L G F ++
Sbjct: 171 MDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE 230
Query: 218 MAMYRKIAKADYKFPTWFSADVRKLLSRI 246
+ + I ++ P D ++LLS I
Sbjct: 231 LEQMQLILES---IPVVHEEDRQELLSVI 256
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V T I +++ G +L V L ++
Sbjct: 73 RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH 132
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ QL+ + + HS G+ HRDLKP N+ ++E+ L++ DFGL+ + D +
Sbjct: 133 VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA-----RQADEEMTG 187
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKI 224
T Y APE++ + DIWS G I+ LL G F S+ + ++I
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 44/299 (14%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
+YE+ +G G + V AR TGQ V + V +T RE+ +++ +H
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKHD 113
Query: 71 NVMQIYEVMASKT------KIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAID 123
N++ I +++ +Y V++ + +L + + S L + R + QL+ +
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLK 172
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS---ALAKCKHQDGLLHTTCGTPAYVAP 180
+ HS V HRDLKP NLL++EN LK+ DFG++ + +HQ + T Y AP
Sbjct: 173 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ-YFMTEYVATRWYRAP 231
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKI---------------- 224
E++ D+WS G I +LA F N + + I
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 291
Query: 225 ------------AKADYKFPTWFSADVRK---LLSRILDPNPSTRISIAKIMENPWFRK 268
+ + T + R+ LL R+L PS RIS A + +P+ K
Sbjct: 292 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ G + F ++ + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSEAEA 332
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V T I +++ G +L V L ++
Sbjct: 65 RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH 124
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ QL+ + + HS G+ HRDLKP N+ ++E+ L++ DFGL+ + D +
Sbjct: 125 VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA-----RQADEEMTG 179
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKI 224
T Y APE++ + DIWS G I+ LL G F S+ + ++I
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 233
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 82
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++K ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 83 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
HRDLK N+ L E+ +K+ DFGL+ G+ ++APEVI R D
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI--RMQDS 199
Query: 191 D----KADIWSCGVILYVLLAGYLPFHDSN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 44/299 (14%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
+YE+ +G G + V AR TGQ V + V +T RE+ +++ +H
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKHD 114
Query: 71 NVMQIYEVMASKT------KIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAID 123
N++ I +++ +Y V++ + +L + + S L + R + QL+ +
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLK 173
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS---ALAKCKHQDGLLHTTCGTPAYVAP 180
+ HS V HRDLKP NLL++EN LK+ DFG++ + +HQ + T Y AP
Sbjct: 174 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ-YFMTEYVATRWYRAP 232
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKI---------------- 224
E++ D+WS G I +LA F N + + I
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 292
Query: 225 ------------AKADYKFPTWFSADVRK---LLSRILDPNPSTRISIAKIMENPWFRK 268
+ + T + R+ LL R+L PS RIS A + +P+ K
Sbjct: 293 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
++Y+ +G G + V A TG V + +T RE+ +++ ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKH 80
Query: 70 PNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDF 124
NV+ + +V + +++ + G +L V KL +D + Q++ + +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 140
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HS + HRDLKP NL ++E+ LK+ DF L+ +H D + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLA-----RHTDDEMTGYVATRWYRAPEIML 195
Query: 185 RRGYDGDKADIWSCGVILYVLLAG 208
+ DIWS G I+ LL G
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ G + F ++ + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSEAEA 332
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 109/242 (45%), Gaps = 35/242 (14%)
Query: 55 DQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFK---------KVSKGK 105
D K E+ ++ I++ + ++ + ++Y + EY + + K K
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 106 LKEDTARKYFQQLISAIDFCHS-RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQ 164
+ + + ++++ + H+ + + HRD+KP N+L+D+NG +K++DFG S
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM----V 203
Query: 165 DGLLHTTCGTPAYVAPEVISRR-GYDGDKADIWSCGVILYVLLAGYLPFH-DSNLMAMYR 222
D + + GT ++ PE S Y+G K DIWS G+ LYV+ +PF +L+ ++
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN 263
Query: 223 KIAKADYKFP-------------------TWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
I + ++P + S + L L NP+ RI+ +++
Sbjct: 264 NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323
Query: 264 PW 265
W
Sbjct: 324 EW 325
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK----LKEDTARKYF 115
E+ + + HPN++++Y A + VMEYA+GG L+ + + A +
Sbjct: 51 ELRQLSRVNHPNIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 108
Query: 116 QQLISAIDFCHS---RGVYHRDLKPENLLLDENG-MLKVTDFGLSALAKCKHQDGLLHTT 171
Q + + HS + + HRDLKP NLLL G +LK+ DFG + C Q + +
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNK 164
Query: 172 CGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF 231
G+ A++APEV Y +K D++S G+IL+ ++ PF + A A +
Sbjct: 165 -GSAAWMAPEVFEGSNYS-EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR 222
Query: 232 PTW---FSADVRKLLSRILDPNPSTRISIAKIME 262
P + L++R +PS R S+ +I++
Sbjct: 223 PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H +
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTADEMTG 188
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK----LKEDTARKYF 115
E+ + + HPN++++Y A + VMEYA+GG L+ + + A +
Sbjct: 52 ELRQLSRVNHPNIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 109
Query: 116 QQLISAIDFCHS---RGVYHRDLKPENLLLDENG-MLKVTDFGLSALAKCKHQDGLLHTT 171
Q + + HS + + HRDLKP NLLL G +LK+ DFG + C Q + +
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNK 165
Query: 172 CGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKF 231
G+ A++APEV Y +K D++S G+IL+ ++ PF + A A +
Sbjct: 166 -GSAAWMAPEVFEGSNYS-EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR 223
Query: 232 PTW---FSADVRKLLSRILDPNPSTRISIAKIME 262
P + L++R +PS R S+ +I++
Sbjct: 224 PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 257
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ FGL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H +
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTADEMTG 188
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 133
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ DFGL+ +H +
Sbjct: 134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTADEMTG 188
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 118/280 (42%), Gaps = 35/280 (12%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG+G +A VY + T V + G RE+S+++ ++H N++ +++
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 78 VMASKTKIYFVMEYA-KGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYHRDLK 136
++ ++ + V EY K + + + + + QL+ + +CH + V HRDLK
Sbjct: 68 IIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK 127
Query: 137 PENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIW 196
P+NLL++E G LK+ DFGL+ + T Y P+++ + D+W
Sbjct: 128 PQNLLINERGELKLADFGLARAKSIPTKT--YDNEVVTLWYRPPDILLGSTDYSTQIDMW 185
Query: 197 SCGVILYVLLAGYLPFHDSN----LMAMYRKIAKA---------------DYKFPTW--- 234
G I Y + G F S L ++R + Y +P +
Sbjct: 186 GVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAE 245
Query: 235 --------FSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+D LL+++L RIS M++P+F
Sbjct: 246 ALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 8/204 (3%)
Query: 15 GRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQ 74
G +G+G F VY T +V + L Q +EI VM QH N+++
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE-ELKQQFDQEIKVMAKCQHENLVE 94
Query: 75 IYEVMASKTKIYFVMEYAKGGELFKKVS----KGKLKEDTARKYFQQLISAIDFCHSRGV 130
+ + + V Y G L ++S L K Q + I+F H
Sbjct: 95 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
HRD+K N+LLDE K++DFGL+ ++ Q + GT AY+APE + RG
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL--RGEIT 212
Query: 191 DKADIWSCGVILYVLLAGYLPFHD 214
K+DI+S GV+L ++ G LP D
Sbjct: 213 PKSDIYSFGVVLLEIITG-LPAVD 235
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 8/204 (3%)
Query: 15 GRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQ 74
G +G+G F VY T +V + L Q +EI VM QH N+++
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE-ELKQQFDQEIKVMAKCQHENLVE 94
Query: 75 IYEVMASKTKIYFVMEYAKGGELFKKVS----KGKLKEDTARKYFQQLISAIDFCHSRGV 130
+ + + V Y G L ++S L K Q + I+F H
Sbjct: 95 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
HRD+K N+LLDE K++DFGL+ ++ Q + GT AY+APE + RG
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL--RGEIT 212
Query: 191 DKADIWSCGVILYVLLAGYLPFHD 214
K+DI+S GV+L ++ G LP D
Sbjct: 213 PKSDIYSFGVVLLEIITG-LPAVD 235
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFG LA+ ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG---LARTAGTSFMMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 306 PAKRISVDDALQHPYI 321
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 122/275 (44%), Gaps = 31/275 (11%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
ME ++ + ++ ++G G F +V R G+ LK G ++ +RE
Sbjct: 5 MEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKK---ESCVAIKTLKGGYTERQRRE 61
Query: 61 I----SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKY 114
S+M +HPN++++ V+ + + + E+ + G L F +++ G+
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 121
Query: 115 FQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT 174
+ + S + + HRDL N+L++ N + KV+DFGLS + D ++ G
Sbjct: 122 LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 175 PA---YVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYK 230
+ APE I+ R + +D WS G++++ +++ G P+ D + + I + DY+
Sbjct: 182 KIPIRWTAPEAIAFRKFT-SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-DYR 239
Query: 231 FPTWFSADVRKLLSRILDPNPSTRISIAKIMENPW 265
P P P S+ ++M + W
Sbjct: 240 LP----------------PPPDCPTSLHQLMLDCW 258
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 8 LMQKYELGRL----------LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQT 57
L QK ++G L LG GN V+ H +G + +K + +Q
Sbjct: 56 LTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSG--LVMARKLIHLEIKPAIRNQI 113
Query: 58 KREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQ 116
RE+ V+ P ++ Y S +I ME+ GG L + + K G++ E K
Sbjct: 114 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 173
Query: 117 QLISAIDFCHSR-GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP 175
+I + + + + HRD+KP N+L++ G +K+ DFG+S + D + ++ GT
Sbjct: 174 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTR 229
Query: 176 AYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPF 212
+Y++PE + Y ++DIWS G+ L + G P
Sbjct: 230 SYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ D GL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPEV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ G + F ++ + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSEAEA 332
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 306 PAKRISVDDALQHPYI 321
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 306 PAKRISVDDALQHPYI 321
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ G + F ++ + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSEAEA 332
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ G + F ++ + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSEAEA 332
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 73 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMS 130
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYV 187
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ G + F ++ + + K+ +
Sbjct: 188 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 246
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 247 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 306
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 307 ASKRISVDEALQHPYINVWYDPSEAEA 333
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 94/206 (45%), Gaps = 8/206 (3%)
Query: 15 GRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQ 74
G +G+G F VY T +V + L Q +EI VM QH N+++
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE-ELKQQFDQEIKVMAKCQHENLVE 88
Query: 75 IYEVMASKTKIYFVMEYAKGGELFKKVS----KGKLKEDTARKYFQQLISAIDFCHSRGV 130
+ + + V Y G L ++S L K Q + I+F H
Sbjct: 89 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH 148
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
HRD+K N+LLDE K++DFGL+ ++ Q + GT AY+APE + RG
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL--RGEIT 206
Query: 191 DKADIWSCGVILYVLLAGYLPFHDSN 216
K+DI+S GV+L ++ G LP D +
Sbjct: 207 PKSDIYSFGVVLLEIITG-LPAVDEH 231
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 36/242 (14%)
Query: 55 DQTKREISVMRLIQHPNVMQIY------------EVMASKTKIYFVMEYAKGGELFKKVS 102
++ RE+ + ++HP +++ + + + K +Y M+ + L ++
Sbjct: 48 EKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN 107
Query: 103 KGKLKEDTARKY----FQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGL-SA 157
E+ R F Q+ A++F HS+G+ HRDLKP N+ + ++KV DFGL +A
Sbjct: 108 GRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA 167
Query: 158 LAKCKHQDGLL--------HT-TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
+ + + + +L HT GT Y++PE I Y K DI+S G+IL+ LL
Sbjct: 168 MDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSY-SHKVDIFSLGLILFELL-- 224
Query: 209 YLPFHDSNLMAMYRKIAKA-DYKFPTWFSADVRK---LLSRILDPNPSTRISIAKIMENP 264
PF S M R + + KFP F+ ++ +L P+P R I+EN
Sbjct: 225 -YPF--STQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENA 281
Query: 265 WF 266
F
Sbjct: 282 VF 283
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 8 LMQKYELGRL----------LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQT 57
L QK ++G L LG GN V+ H +G + +K + +Q
Sbjct: 21 LTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSG--LVMARKLIHLEIKPAIRNQI 78
Query: 58 KREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQ 116
RE+ V+ P ++ Y S +I ME+ GG L + + K G++ E K
Sbjct: 79 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 138
Query: 117 QLISAIDFCHSR-GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP 175
+I + + + + HRD+KP N+L++ G +K+ DFG+S + D + ++ GT
Sbjct: 139 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTR 194
Query: 176 AYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPF 212
+Y++PE + Y ++DIWS G+ L + G P
Sbjct: 195 SYMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMS 122
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYV 179
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 180 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 299 PAKRISVDDALQHPYI 314
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ D GL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
ME K L ELGR G + V RH+ +GQ + ++ + Q ++
Sbjct: 2 MEVKADDLEPIMELGR----GAYGVVEKMRHVPSGQIMAVKR------IRATVNSQEQKR 51
Query: 61 ISV-----MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGG--ELFKKV-SKGK-LKEDTA 111
+ + MR + P + Y + + ++ ME + +K+V KG+ + ED
Sbjct: 52 LLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDIL 111
Query: 112 RKYFQQLISAIDFCHSR-GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
K ++ A++ HS+ V HRD+KP N+L++ G +K+ DFG+S D
Sbjct: 112 GKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV---DDVAKDI 168
Query: 171 TCGTPAYVAPEVI----SRRGYDGDKADIWSCGVILYVLLAGYLPFHD--SNLMAMYRKI 224
G Y+APE I +++GY K+DIWS G+ + L P+ + + + +
Sbjct: 169 DAGCKPYMAPERINPELNQKGYSV-KSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227
Query: 225 AKADYKFPT-WFSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
+ + P FSA+ S+ L N R + ++M++P+F
Sbjct: 228 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDT 110
+T RE+ +++ ++H NV+ + +V + +++ + G +L V KL +D
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q++ + + HS + HRDLKP NL ++E+ LK+ D GL+ +H D +
Sbjct: 127 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLA-----RHTDDEMTG 181
Query: 171 TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAG 208
T Y APE++ + DIWS G I+ LL G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 35/220 (15%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQT-------KREISVMRL 66
L +G G+F VY + G LKV VD T + E++V+R
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGD---------VAVKILKV--VDPTPEQFQAFRNEVAVLRK 88
Query: 67 IQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQ------QLIS 120
+H N++ M +K + V ++ +G L+K + ++T + FQ Q
Sbjct: 89 TRHVNILLFMGYM-TKDNLAIVTQWCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQ 143
Query: 121 AIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
+D+ H++ + HRD+K N+ L E +K+ DFGL+ + + G+ ++AP
Sbjct: 144 GMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 181 EVISRRGYDGD----KADIWSCGVILYVLLAGYLPFHDSN 216
EVI R D + ++D++S G++LY L+ G LP+ N
Sbjct: 204 EVI--RMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFG LA+ ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG---LARTAGTSFMMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 306 PAKRISVDDALQHPYI 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 74 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMS 131
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 132 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMVPFV 188
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ G + F ++ + + K+ +
Sbjct: 189 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 247
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 248 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 307
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 308 ASKRISVDEALQHPYINVWYDPSEAEA 334
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 82
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++ ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 83 L-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
HRDLK N+ L E+ +K+ DFGL+ G+ ++APEVI R D
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI--RMQDS 199
Query: 191 D----KADIWSCGVILYVLLAGYLPFHDSN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMS 130
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYV 187
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 188 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 246
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 247 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 306
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 307 PAKRISVDDALQHPYI 322
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 126/267 (47%), Gaps = 29/267 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISV-----MRLIQHPNV 72
LG+G + V RH+ +GQ + ++ + Q ++ + + MR + P
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKR------IRATVNSQEQKRLLMDLDISMRTVDCPFT 112
Query: 73 MQIYEVMASKTKIYFVMEYAKGG--ELFKKV-SKGK-LKEDTARKYFQQLISAIDFCHSR 128
+ Y + + ++ ME + +K+V KG+ + ED K ++ A++ HS+
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 129 -GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT-CGTPAYVAPEVI--- 183
V HRD+KP N+L++ G +K+ DFG+S D + T G Y+APE I
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLV----DSVAKTIDAGCKPYMAPERINPE 228
Query: 184 -SRRGYDGDKADIWSCGVILYVLLAGYLPFHD--SNLMAMYRKIAKADYKFPT-WFSADV 239
+++GY K+DIWS G+ + L P+ + + + + + + P FSA+
Sbjct: 229 LNQKGYSV-KSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEF 287
Query: 240 RKLLSRILDPNPSTRISIAKIMENPWF 266
S+ L N R + ++M++P+F
Sbjct: 288 VDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 306 PAKRISVDDALQHPYI 321
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFG LA+ ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMTPYV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 306 PAKRISVDDALQHPYI 321
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMS 167
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYV 224
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 225 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 283
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 343
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 344 PAKRISVDDALQHPYI 359
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMS 130
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFG LA+ ++
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMTPYV 187
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 188 VTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 246
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 247 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 306
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 307 PAKRISVDDALQHPYI 322
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 71 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMS 128
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 129 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYV 185
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 186 VTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 244
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 245 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 304
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 305 PAKRISVDDALQHPYI 320
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMS 167
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYV 224
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 225 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 283
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 343
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 344 PAKRISVDDALQHPYI 359
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMS 123
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYV 180
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 181 VTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 240 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 300 PAKRISVDDALQHPYI 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMS 122
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYV 179
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 180 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 299 PAKRISVDDALQHPYI 314
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 59 REISVMRLIQHPNVMQIYEVMASK------TKIYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMS 123
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFG LA+ ++
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMTPYV 180
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 181 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A FP F ++ R LLS++L +
Sbjct: 240 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 251 PSTRISIAKIMENPWF 266
P+ RIS+ +++P+
Sbjct: 300 PAKRISVDDALQHPYI 315
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 31/259 (11%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPNV 72
++G G F +V R G+ LK G ++ +RE S+M +HPN+
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKK---ESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 73 MQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
+++ V+ + + + E+ + G L F +++ G+ + + S + +
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY 139
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA---YVAPEVISRRG 187
HRDL N+L++ N + KV+DFGLS + D ++ G + APE I+ R
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 188 YDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLSRI 246
+ +D WS G++++ +++ G P+ D + + I + DY+ P
Sbjct: 200 FT-SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-DYRLP-------------- 243
Query: 247 LDPNPSTRISIAKIMENPW 265
P P S+ ++M + W
Sbjct: 244 --PPPDCPTSLHQLMLDCW 260
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 71
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++K ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 72 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD- 189
HRDLK N+ L E+ +K+ DFGL+ + G+ ++APEVI + +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 190 -GDKADIWSCGVILYVLLAGYLPFHDSN 216
++D+++ G++LY L+ G LP+ + N
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG GN V+ H +G + +K + +Q RE+ V+ P ++ Y
Sbjct: 14 LGAGNGGVVFKVSHKPSG--LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR-GVYHRDL 135
S +I ME+ GG L + + K G++ E K +I + + + + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
KP N+L++ G +K+ DFG+S + D + ++ GT +Y++PE + Y ++DI
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 196 WSCGVILYVLLAGYLPF 212
WS G+ L + G P
Sbjct: 187 WSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG GN V+ H +G + +K + +Q RE+ V+ P ++ Y
Sbjct: 14 LGAGNGGVVFKVSHKPSG--LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR-GVYHRDL 135
S +I ME+ GG L + + K G++ E K +I + + + + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
KP N+L++ G +K+ DFG+S + D + ++ GT +Y++PE + Y ++DI
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 196 WSCGVILYVLLAGYLPF 212
WS G+ L + G P
Sbjct: 187 WSMGLSLVEMAVGRYPI 203
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 39 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 93
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++K ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 94 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 152
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
HRDLK N+ L E+ +K+ DFGL+ + G+ ++APEVI R D
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI--RMQDK 210
Query: 191 D----KADIWSCGVILYVLLAGYLPFHDSN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLPYSNIN 240
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG GN V+ H +G + +K + +Q RE+ V+ P ++ Y
Sbjct: 14 LGAGNGGVVFKVSHKPSG--LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSR-GVYHRDL 135
S +I ME+ GG L + + K G++ E K +I + + + + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
KP N+L++ G +K+ DFG+S + D + ++ GT +Y++PE + Y ++DI
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 196 WSCGVILYVLLAGYLPF 212
WS G+ L + G P
Sbjct: 187 WSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG GN V+ H +G + +K + +Q RE+ V+ P ++ Y
Sbjct: 14 LGAGNGGVVFKVSHKPSG--LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRG-VYHRDL 135
S +I ME+ GG L + + K G++ E K +I + + + + HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 136 KPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADI 195
KP N+L++ G +K+ DFG+S + D + ++ GT +Y++PE + Y ++DI
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 196 WSCGVILYVLLAGYLPF 212
WS G+ L + G P
Sbjct: 187 WSMGLSLVEMAVGRYPI 203
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 71
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++K ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 72 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD- 189
HRDLK N+ L E+ +K+ DFGL+ + G+ ++APEVI + +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 190 -GDKADIWSCGVILYVLLAGYLPFHDSN 216
++D+++ G++LY L+ G LP+ + N
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 14 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 68
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++K ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 69 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 127
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD- 189
HRDLK N+ L E+ +K+ DFGL+ + G+ ++APEVI + +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 190 -GDKADIWSCGVILYVLLAGYLPFHDSN 216
++D+++ G++LY L+ G LP+ + N
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPYSNIN 215
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 94
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++K ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 95 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
HRDLK N+ L E+ +K+ DFGL+ + G+ ++APEVI R D
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI--RMQDK 211
Query: 191 D----KADIWSCGVILYVLLAGYLPFHDSN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 66
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++K ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 67 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD- 189
HRDLK N+ L E+ +K+ DFGL+ + G+ ++APEVI + +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 190 -GDKADIWSCGVILYVLLAGYLPFHDSN 216
++D+++ G++LY L+ G LP+ + N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 111/267 (41%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMEPEV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + DIWS G I+ ++ + F + + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 246 PAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSEAEA 332
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRL 66
+ + +++G G+ +V Y R GQ LK G ++ +R E S+M
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQR---DVPVAIKALKAGYTERQRRDFLSEASIMGQ 106
Query: 67 IQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDF 124
HPN++++ V+ V EY + G L F + G+ + + + + +
Sbjct: 107 FDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA--YVAPEV 182
G HRDL N+L+D N + KV+DFGLS + + D TT G + APE
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE-DDPDAAXTTTGGKIPIRWTAPEA 225
Query: 183 ISRRGYDGDKADIWSCGVILYVLLA-GYLPF 212
I+ R + +D+WS GV+++ +LA G P+
Sbjct: 226 IAFRTFS-SASDVWSFGVVMWEVLAYGERPY 255
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 84/166 (50%), Gaps = 20/166 (12%)
Query: 115 FQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGL-SALAKCKHQDGLLHT--- 170
F Q+ A++F HS+G+ HRDLKP N+ + ++KV DFGL +A+ + + + +L
Sbjct: 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 171 ------TCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKI 224
GT Y++PE I Y K DI+S G+IL+ LL + S M R I
Sbjct: 230 YATHXGQVGTKLYMSPEQIHGNNY-SHKVDIFSLGLILFELLYSF-----STQMERVRII 283
Query: 225 AKA-DYKFPTWFSADVRK---LLSRILDPNPSTRISIAKIMENPWF 266
+ KFP F+ + ++ +L P+P+ R I+EN F
Sbjct: 284 TDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIF 329
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 15/227 (6%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQHPN 71
R++G G F +V R G+ LKVG ++ +R E S+M HPN
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKR---DVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPN 105
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
V+ + V+ + V+E+ + G L F + G+ + + + + + G
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMG 165
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA-YVAPEVISRRG 187
HRDL N+L++ N + KV+DFGLS + + + + TT G P + APE I R
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 188 YDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPT 233
+ +D+WS G++++ V+ G P+ D + + + I + Y+ P
Sbjct: 225 FT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLPA 269
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRL 66
+ + +++G G+ +V Y R GQ LK G ++ +R E S+M
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQR---DVPVAIKALKAGYTERQRRDFLSEASIMGQ 106
Query: 67 IQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDF 124
HPN++++ V+ V EY + G L F + G+ + + + + +
Sbjct: 107 FDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA--YVAPEV 182
G HRDL N+L+D N + KV+DFGLS + + D TT G + APE
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE-DDPDAAYTTTGGKIPIRWTAPEA 225
Query: 183 ISRRGYDGDKADIWSCGVILYVLLA-GYLPF 212
I+ R + +D+WS GV+++ +LA G P+
Sbjct: 226 IAFRTFS-SASDVWSFGVVMWEVLAYGERPY 255
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMS 129
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMEPEV 186
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + D+WS G I+ ++ + F + + + K+ +
Sbjct: 187 VTRYYRAPEVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSEAEA 332
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 8 LMQKYELGRL----------LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQT 57
L QK ++G L LG GN V +H +G + +K + +Q
Sbjct: 4 LTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSG--LIMARKLIHLEIKPAIRNQI 61
Query: 58 KREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTARKYFQ 116
RE+ V+ P ++ Y S +I ME+ GG L + + + K + E+ K
Sbjct: 62 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSI 121
Query: 117 QLISAIDFCHSR-GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP 175
++ + + + + HRD+KP N+L++ G +K+ DFG+S + D + ++ GT
Sbjct: 122 AVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTR 177
Query: 176 AYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPF 212
+Y+APE + Y ++DIWS G+ L L G P
Sbjct: 178 SYMAPERLQGTHYS-VQSDIWSMGLSLVELAVGRYPI 213
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 13/226 (5%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQHPN 71
R++G G F +V R G+ LKVG ++ +R E S+M HPN
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKR---ELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 84
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
++ + V+ + V EY + G L F K + G+ + + + + + G
Sbjct: 85 IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMG 144
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISRRGY 188
HRDL N+L++ N + KV+DFGLS + + + P + APE I+ R +
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 189 DGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPT 233
+D+WS G++++ V+ G P+ + + + + + Y+ P+
Sbjct: 205 T-SASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG-YRLPS 248
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 26/240 (10%)
Query: 8 LMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM-RL 66
+++KYEL + LG+G + V+ + TG+ V +T REI ++ L
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTD-AQRTFREIMILTEL 65
Query: 67 IQHPNVMQIYEVMASKTK--IYFVMEYAKGGELFKKVSKGKLKEDTARKYF-QQLISAID 123
H N++ + V+ + +Y V +Y + V + + E ++Y QLI I
Sbjct: 66 SGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVYQLIKVIK 123
Query: 124 FCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS-------------ALAKCKHQDG---- 166
+ HS G+ HRD+KP N+LL+ +KV DFGLS L+ ++ +
Sbjct: 124 YLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 167 --LLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKI 224
+L T Y APE++ D+WS G IL +L G F S+ M +I
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 32 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 86
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++K ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 87 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 145
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD- 189
HRDLK N+ L E+ +K+ DFGL+ G+ ++APEVI + +
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 190 -GDKADIWSCGVILYVLLAGYLPFHDSN 216
++D+++ G++LY L+ G LP+ + N
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPYSNIN 233
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 66
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++K ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 67 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD- 189
HRDLK N+ L E+ +K+ DFGL+ G+ ++APEVI + +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 190 -GDKADIWSCGVILYVLLAGYLPFHDSN 216
++D+++ G++LY L+ G LP+ + N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 94
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++K ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 95 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
HRDLK N+ L E+ +K+ DFGL+ G+ ++APEVI R D
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI--RMQDK 211
Query: 191 D----KADIWSCGVILYVLLAGYLPFHDSN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 30/265 (11%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCN 74
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGG--ELFKKVSKGK--LKEDTARKYFQQLISA 121
++++ Y K ++Y V++Y + + S+ K L + Y QL +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 122 IDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
+ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + C Y AP
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPN-VSXICSR-YYRAP 191
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVR 240
E+I D+WS G +L LL G F + + +I K R
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTPTR 244
Query: 241 KLLSRILDPNPSTRISIAKIMENPW 265
+ + R ++PN T + +I +PW
Sbjct: 245 EQI-REMNPN-YTEFAFPQIKAHPW 267
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNV 72
+G+ +G G+F VY + H + L+ K E+ V+R +H N+
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-----FKNEVGVLRKTRHVNI 66
Query: 73 MQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGV 130
+ ++ ++ ++ V ++ +G L+ + + K + + +Q +D+ H++ +
Sbjct: 67 L-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD- 189
HRDLK N+ L E+ +K+ DFGL+ + G+ ++APEVI + +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 190 -GDKADIWSCGVILYVLLAGYLPFHDSN 216
++D+++ G++LY L+ G LP+ + N
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 77 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMS 134
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFGL+ A ++
Sbjct: 135 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYV 191
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + D+WS G I+ ++ + F + + + K+ +
Sbjct: 192 VTRYYRAPEVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 250
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 251 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 310
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 311 ASKRISVDEALQHPYINVWYDPSEAEA 337
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 54/267 (20%)
Query: 59 REISVMRLIQHPNVMQIYEVMASKTK------IYFVMEYAKGGELFKKVSKGKLKEDTAR 112
RE+ +M+ + H N++ + V + +Y VME +V + +L +
Sbjct: 66 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMS 123
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q++ I HS G+ HRDLKP N+++ + LK+ DFG LA+ ++
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG---LARTAGTSFMMTPYV 180
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK------ 226
T Y APEVI GY + D+WS G I+ ++ + F + + + K+ +
Sbjct: 181 VTRYYRAPEVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 227 ---------------------ADYKFPTWF---------------SADVRKLLSRILDPN 250
A Y F F ++ R LLS++L +
Sbjct: 240 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 251 PSTRISIAKIMENPWFRKGLNSKSAKS 277
S RIS+ + +++P+ + A++
Sbjct: 300 ASKRISVDEALQHPYINVWYDPSEAEA 326
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCN 74
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSY-ICSR-YYR 189
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 242
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T + +I +PW
Sbjct: 243 TREQI-REMNPN-YTEFAFPQIKAHPW 267
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 110
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 168
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + + C Y
Sbjct: 169 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSY-ICSR-YYR 225
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 278
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 279 TREQI-REMNPN-YTEFKFPQIKAHPW 303
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 102
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 160
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + + C Y
Sbjct: 161 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSY-ICSR-YYR 217
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 270
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 271 TREQI-REMNPN-YTEFKFPQIKAHPW 295
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 112
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + + C Y
Sbjct: 171 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSY-ICSR-YYR 227
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 280
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 281 TREQI-REMNPN-YTEFKFPQIKAHPW 305
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 108
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + + C Y
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSY-ICSR-YYR 223
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 276
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 277 TREQI-REMNPN-YTEFKFPQIKAHPW 301
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 104
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V EY + G L F + + + + S + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGLS + + + P + +PE I+
Sbjct: 165 DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 281
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 336
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 79
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + + C Y
Sbjct: 138 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSY-ICSR-YYR 194
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 247
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 248 TREQI-REMNPN-YTEFKFPQIKAHPW 272
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 87
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 145
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + + C Y
Sbjct: 146 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSY-ICSR-YYR 202
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 255
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 256 TREQI-REMNPN-YTEFKFPQIKAHPW 280
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 86
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + C Y
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPN-VSXICSR-YYR 201
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 254
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 255 TREQI-REMNPN-YTEFKFPQIKAHPW 279
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCN 74
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSY-ICSR-YYR 189
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 242
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 243 TREQI-REMNPN-YTEFKFPQIKAHPW 267
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 153
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + + C Y
Sbjct: 212 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSY-ICSR-YYR 268
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 321
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 322 TREQI-REMNPN-YTEFKFPQIKAHPW 346
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 86
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + C Y
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPN-VSXICSR-YYR 201
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 254
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 255 TREQI-REMNPN-YTEFKFPQIKAHPW 279
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 108
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + C Y
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPN-VSXICSR-YYR 223
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 276
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 277 TREQI-REMNPN-YTEFKFPQIKAHPW 301
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 93
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 151
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + C Y
Sbjct: 152 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPN-VSXICSR-YYR 208
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 261
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 262 TREQI-REMNPN-YTEFKFPQIKAHPW 286
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 82
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 140
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + C Y
Sbjct: 141 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPN-VSXICSR-YYR 197
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 250
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 251 TREQI-REMNPN-YTEFKFPQIKAHPW 275
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPNVSY-ICSR-YYR 189
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 242
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 243 TREQI-REMNPN-YTEFKFPQIKAHPW 267
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 104
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V EY + G L F + + + + S + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGLS + + + P + +PE I+
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 281
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 336
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 104
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V EY + G L F + + + + S + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGLS + + + P + +PE I+
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 281
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 336
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 104
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V EY + G L F + + + + S + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGLS + + + P + +PE I+
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 281
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 336
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPN-VSXICSR-YYR 189
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 242
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 243 TREQI-REMNPN-YTEFKFPQIKAHPW 267
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
++ ELGR +G+G F V+ ++ V ++ +E MR
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP+++++ V+ ++ ++ +ME GEL F +V K L + Y QL +A+ +
Sbjct: 70 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAK----CKHQDGLLHTTCGTPAYVAPEV 182
S+ HRD+ N+L+ N +K+ DFGLS + K G L ++APE
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI-----KWMAPES 183
Query: 183 ISRRGYDGDKADIWSCGVILY-VLLAGYLPFH 213
I+ R + +D+W GV ++ +L+ G PF
Sbjct: 184 INFRRFTS-ASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 102
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V EY + G L F + + + + S + +
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 162
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGLS + + + P + +PE I+
Sbjct: 163 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 222
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 223 RKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 279
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 280 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 334
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPN-VSXICSR-YYR 189
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 242
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 243 TREQI-REMNPN-YTEFKFPQIKAHPW 267
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 78
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 136
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + C Y
Sbjct: 137 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPN-VSXICSR-YYR 193
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 246
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 247 TREQI-REMNPN-YTEFKFPQIKAHPW 271
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 75
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K ++Y V++Y E +V+ K L + Y QL
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 133
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + C Y
Sbjct: 134 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPN-VSXICSR-YYR 190
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 243
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 244 TREQI-REMNPN-YTEFKFPQIKAHPW 268
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 104
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V EY + G L F + + + + S + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGLS + + + P + +PE I+
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 281
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 336
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 109/254 (42%), Gaps = 23/254 (9%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG+G+F +V+ TG KV L E+ + P ++ +Y
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVK--------KVRLEVFRAEELMACAGLTSPRIVPLYG 152
Query: 78 VMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAIDFCHSRGVYHRDLK 136
+ + ME +GG L + V +G L ED A Y Q + +++ HSR + H D+K
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 212
Query: 137 PENLLLDENG-MLKVTDFGLSALAKCKHQDGLLHTTC------GTPAYVAPEVISRRGYD 189
+N+LL +G + DFG A C DGL + GT ++APEV+ R D
Sbjct: 213 ADNVLLSSDGSHAALCDFG---HAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKAD---YKFPTWFSADVRKLLSRI 246
K D+WS ++ +L G P+ + KIA + P + + +
Sbjct: 270 A-KVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEG 328
Query: 247 LDPNPSTRISIAKI 260
L P R+S A++
Sbjct: 329 LRKEPIHRVSAAEL 342
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 28/272 (10%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVG--LVDQTKREISVMRLIQHPNVM 73
R LG+G+F KV R+ G + + G + K+EI ++R + H N++
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 74 QIYEVMASK--TKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ + I +ME+ G L + + K K K + + KY Q+ +D+ SR
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE + + +
Sbjct: 147 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKF 206
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADY------------------K 230
+D+WS GV L+ LL Y DS+ MA++ K+ +
Sbjct: 207 -YIASDVWSFGVTLHELLT-YCD-SDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP 263
Query: 231 FPTWFSADVRKLLSRILDPNPSTRISIAKIME 262
P +V +L+ + + PS R S ++E
Sbjct: 264 CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 75
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V EY + G L F + + + + S + +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGLS + + + P + +PE I+
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 196 RKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 252
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 253 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 307
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 92
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V EY + G L F + + + + S + +
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 152
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGLS + + + P + +PE I+
Sbjct: 153 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 212
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 213 RKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 269
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 270 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 324
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 28/272 (10%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVG--LVDQTKREISVMRLIQHPNVM 73
R LG+G+F KV R+ G + + G + K+EI ++R + H N++
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 74 QIYEVMASK--TKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ + I +ME+ G L + + K K K + + KY Q+ +D+ SR
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE + + +
Sbjct: 135 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKF 194
Query: 189 DGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADY------------------K 230
+D+WS GV L+ LL Y DS+ MA++ K+ +
Sbjct: 195 -YIASDVWSFGVTLHELLT-YCD-SDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP 251
Query: 231 FPTWFSADVRKLLSRILDPNPSTRISIAKIME 262
P +V +L+ + + PS R S ++E
Sbjct: 252 CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 12/214 (5%)
Query: 55 DQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTAR 112
D E VM + HP ++Q+Y V + I V E+ + G L + + +G +T
Sbjct: 67 DDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 126
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
+ + + V HRDL N L+ EN ++KV+DFG++ D ++
Sbjct: 127 GMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSST 182
Query: 173 GT--PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD 228
GT P + +PEV S Y K+D+WS GV+++ V G +P+ + + + I+
Sbjct: 183 GTKFPVKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 241
Query: 229 YKF-PTWFSADVRKLLSRILDPNPSTRISIAKIM 261
+ P S V ++++ P R + ++++
Sbjct: 242 RLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLL 275
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 110/232 (47%), Gaps = 29/232 (12%)
Query: 55 DQTKREISVMRLIQHPNVMQIYEVM----ASKTKIYFVMEYAKGGELFKKVSKGK----- 105
++ +RE + RL HPN++++ +K + + ++ + K G L+ ++ + K
Sbjct: 71 EEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF 130
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
L ED + ++ H++G HRDLKP N+LL + G + D G S C H +
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG-SMNQACIHVE 189
Query: 166 GLLHTTC--------GTPAYVAPEVISRRGYD--GDKADIWSCGVILYVLLAGYLPFH-- 213
G T +Y APE+ S + + ++ D+WS G +LY ++ G P+
Sbjct: 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
Query: 214 ----DSNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIM 261
DS +A+ +++ + P SA + +LL+ ++ +P R I ++
Sbjct: 250 FQKGDSVALAVQNQLSIP--QSPRHSSA-LWQLLNSMMTVDPHQRPHIPLLL 298
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 12/194 (6%)
Query: 49 LKVGLVDQTKR----EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVS 102
LK G ++ +R E S+M HPNV+ + V+ T + + E+ + G L F + +
Sbjct: 69 LKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN 128
Query: 103 KGKLKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCK 162
G+ + + + + + HRDL N+L++ N + KV+DFGLS +
Sbjct: 129 DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Query: 163 HQDGLLHTTCGTPA---YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLM 218
D + G + APE I R + +D+WS G++++ V+ G P+ D
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTS-ASDVWSYGIVMWEVMSYGERPYWDMTNQ 247
Query: 219 AMYRKIAKADYKFP 232
+ I + DY+ P
Sbjct: 248 DVINAIEQ-DYRLP 260
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQ 117
E VM + HP ++Q+Y V + I V E+ + G L + + +G +T
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 111
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--P 175
+ + + V HRDL N L+ EN ++KV+DFG++ D ++ GT P
Sbjct: 112 VCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFP 167
Query: 176 A-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD--YKF 231
+ +PEV S Y K+D+WS GV+++ V G +P+ + + + I+ YK
Sbjct: 168 VKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK- 225
Query: 232 PTWFSADVRKLLSRILDPNPSTRISIAKIM 261
P S V ++++ P R + ++++
Sbjct: 226 PRLASTHVYQIMNHCWKERPEDRPAFSRLL 255
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 24/217 (11%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
L +LGQG A V+ RH TG L+ VD RE V++ + H N++
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLKKLNHKNIV 70
Query: 74 QIYEVMASKTKIY--FVMEYAKGGELFKKVSKGK----LKEDTARKYFQQLISAIDFCHS 127
+++ + T + +ME+ G L+ + + L E + ++ ++
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 128 RGVYHRDLKPENLL--LDENG--MLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
G+ HR++KP N++ + E+G + K+TDFG A+ D + GT Y+ P++
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA---ARELEDDEQFVSLYGTEEYLHPDMY 187
Query: 184 SR--------RGYDGDKADIWSCGVILYVLLAGYLPF 212
R + Y G D+WS GV Y G LPF
Sbjct: 188 ERAVLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPF 223
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 42/277 (15%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR--- 65
M ++++ R+ GQG F V + TG SV + RE+ +M+
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR-------NRELQIMQDLA 74
Query: 66 LIQHPNVMQIYEVMAS-----KTKIYF--VMEYAKGGELFKKVSKGKLKEDTA------R 112
++ HPN++Q+ + + IY VMEY + + + + A +
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAPPPILIK 132
Query: 113 KYFQQLISAIDFCH--SRGVYHRDLKPENLLLDE-NGMLKVTDFGLSALAKCKHQDGLLH 169
+ QLI +I H S V HRD+KP N+L++E +G LK+ DFG + K + +
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG--SAKKLSPSEPNVA 190
Query: 170 TTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADY 229
C Y APE+I + DIWS G I ++ G F N +I +
Sbjct: 191 YICSR-YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV-- 247
Query: 230 KFPTWFSADVRKLLSRILDPNPS-TRISIAKIMENPW 265
R++L ++ NPS T + + PW
Sbjct: 248 -----LGCPSREVLRKL---NPSHTDVDLYNSKGIPW 276
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M++ +L + +G+G F V + G +V + E SVM ++
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLA-------EASVMTQLR 57
Query: 69 HPNVMQIYEVMAS-KTKIYFVMEYAKGGELFKKV-SKGK--LKEDTARKYFQQLISAIDF 124
H N++Q+ V+ K +Y V EY G L + S+G+ L D K+ + A+++
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 117
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HRDL N+L+ E+ + KV+DFGL+ A G L + APE +
Sbjct: 118 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALR 172
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPF 212
+ + K+D+WS G++L+ + + G +P+
Sbjct: 173 EKKFS-TKSDVWSFGILLWEIYSFGRVPY 200
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 89/204 (43%), Gaps = 8/204 (3%)
Query: 15 GRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQ 74
G G+G F VY T +V + L Q +EI V QH N+++
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE-ELKQQFDQEIKVXAKCQHENLVE 85
Query: 75 IYEVMASKTKIYFVMEYAKGGELFKKVS----KGKLKEDTARKYFQQLISAIDFCHSRGV 130
+ + + V Y G L ++S L K Q + I+F H
Sbjct: 86 LLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH 145
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDG 190
HRD+K N+LLDE K++DFGL+ ++ Q GT AY APE + RG
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL--RGEIT 203
Query: 191 DKADIWSCGVILYVLLAGYLPFHD 214
K+DI+S GV+L ++ G LP D
Sbjct: 204 PKSDIYSFGVVLLEIITG-LPAVD 226
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQHPN 71
+++G G F +V R G+ LK G D+ +R E S+M HPN
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKR---EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 91
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
++ + V+ + + EY + G L F + + G+ + + S + +
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 151
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISRRGY 188
HRDL N+L++ N + KV+DFG+S + + + P + APE I+ R +
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 189 DGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKFP 232
+D+WS G++++ +++ G P+ D + + + I + Y+ P
Sbjct: 212 TS-ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLP 254
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M++ +L + +G+G F V + G +V + E SVM ++
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLA-------EASVMTQLR 72
Query: 69 HPNVMQIYEVMAS-KTKIYFVMEYAKGGELFKKV-SKGK--LKEDTARKYFQQLISAIDF 124
H N++Q+ V+ K +Y V EY G L + S+G+ L D K+ + A+++
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HRDL N+L+ E+ + KV+DFGL+ A G L + APE +
Sbjct: 133 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALR 187
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPF 212
+ + K+D+WS G++L+ + + G +P+
Sbjct: 188 EKKFS-TKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQ 117
E VM + HP ++Q+Y V + I V E+ + G L + + +G +T
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 111
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--P 175
+ + + V HRDL N L+ EN ++KV+DFG++ D ++ GT P
Sbjct: 112 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFP 167
Query: 176 A-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD--YKF 231
+ +PEV S Y K+D+WS GV+++ V G +P+ + + + I+ YK
Sbjct: 168 VKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK- 225
Query: 232 PTWFSADVRKLLSRILDPNPSTRISIAKIM 261
P S V ++++ P R + ++++
Sbjct: 226 PRLASTHVYQIMNHCWKERPEDRPAFSRLL 255
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQ 117
E VM + HP ++Q+Y V + I V E+ + G L + + +G +T
Sbjct: 50 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 109
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--P 175
+ + + V HRDL N L+ EN ++KV+DFG++ D ++ GT P
Sbjct: 110 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFP 165
Query: 176 A-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD--YKF 231
+ +PEV S Y K+D+WS GV+++ V G +P+ + + + I+ YK
Sbjct: 166 VKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK- 223
Query: 232 PTWFSADVRKLLSRILDPNPSTRISIAKIM 261
P S V ++++ P R + ++++
Sbjct: 224 PRLASTHVYQIMNHCWKERPEDRPAFSRLL 253
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 104
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V EY + G L F + + + + S + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGL+ + + + P + +PE I+
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 281
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 336
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
++ ELGR +G+G F V+ ++ V ++ +E MR
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP+++++ V+ ++ ++ +ME GEL F +V K L + Y QL +A+ +
Sbjct: 450 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAK----CKHQDGLLHTTCGTPAYVAPEV 182
S+ HRD+ N+L+ N +K+ DFGLS + K G L ++APE
Sbjct: 509 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 563
Query: 183 ISRRGYDGDKADIWSCGVILY-VLLAGYLPFH 213
I+ R + +D+W GV ++ +L+ G PF
Sbjct: 564 INFRRFTS-ASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 23/254 (9%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG+G+F +V+ TG KV L E+ + P ++ +Y
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVK--------KVRLEVFRAEELMACAGLTSPRIVPLYG 133
Query: 78 VMASKTKIYFVMEYAKGGELFKKV-SKGKLKEDTARKYFQQLISAIDFCHSRGVYHRDLK 136
+ + ME +GG L + V +G L ED A Y Q + +++ HSR + H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 193
Query: 137 PENLLLDENG-MLKVTDFGLSALAKCKHQDGL---LHT---TCGTPAYVAPEVISRRGYD 189
+N+LL +G + DFG A C DGL L T GT ++APEV+ R D
Sbjct: 194 ADNVLLSSDGSHAALCDFG---HAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD 250
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKAD---YKFPTWFSADVRKLLSRI 246
K D+WS ++ +L G P+ + KIA + P + + +
Sbjct: 251 A-KVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEG 309
Query: 247 LDPNPSTRISIAKI 260
L P R+S A++
Sbjct: 310 LRKEPIHRVSAAEL 323
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
++ ELGR +G+G F V+ ++ V ++ +E MR
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP+++++ V+ ++ ++ +ME GEL F +V K L + Y QL +A+ +
Sbjct: 70 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAK----CKHQDGLLHTTCGTPAYVAPEV 182
S+ HRD+ N+L+ N +K+ DFGLS + K G L ++APE
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 183
Query: 183 ISRRGYDGDKADIWSCGVILY-VLLAGYLPFH 213
I+ R + +D+W GV ++ +L+ G PF
Sbjct: 184 INFRRFTS-ASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQ 117
E VM + HP ++Q+Y V + I V E+ + G L + + +G +T
Sbjct: 55 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 114
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--P 175
+ + + V HRDL N L+ EN ++KV+DFG++ D ++ GT P
Sbjct: 115 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFP 170
Query: 176 A-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKAD--YKF 231
+ +PEV S Y K+D+WS GV+++ V G +P+ + + + I+ YK
Sbjct: 171 VKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK- 228
Query: 232 PTWFSADVRKLLSRILDPNPSTRISIAKIM 261
P S V ++++ P R + ++++
Sbjct: 229 PRLASTHVYQIMNHCWRERPEDRPAFSRLL 258
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
++ ELGR +G+G F V+ ++ V ++ +E MR
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP+++++ V+ ++ ++ +ME GEL F +V K L + Y QL +A+ +
Sbjct: 70 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAK----CKHQDGLLHTTCGTPAYVAPEV 182
S+ HRD+ N+L+ N +K+ DFGLS + K G L ++APE
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 183
Query: 183 ISRRGYDGDKADIWSCGVILY-VLLAGYLPFH 213
I+ R + +D+W GV ++ +L+ G PF
Sbjct: 184 INFRRFTS-ASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
++ ELGR +G+G F V+ ++ V ++ +E MR
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP+++++ V+ ++ ++ +ME GEL F +V K L + Y QL +A+ +
Sbjct: 67 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAK----CKHQDGLLHTTCGTPAYVAPEV 182
S+ HRD+ N+L+ N +K+ DFGLS + K G L ++APE
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 180
Query: 183 ISRRGYDGDKADIWSCGVILY-VLLAGYLPFH 213
I+ R + +D+W GV ++ +L+ G PF
Sbjct: 181 INFRRFTS-ASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M++ +L + +G+G F V + G +V + E SVM ++
Sbjct: 192 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLA-------EASVMTQLR 244
Query: 69 HPNVMQIYEVMAS-KTKIYFVMEYAKGGELFKKV-SKGK--LKEDTARKYFQQLISAIDF 124
H N++Q+ V+ K +Y V EY G L + S+G+ L D K+ + A+++
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HRDL N+L+ E+ + KV+DFGL+ A G L + APE +
Sbjct: 305 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALR 359
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPF 212
+ + K+D+WS G++L+ + + G +P+
Sbjct: 360 EKKFS-TKSDVWSFGILLWEIYSFGRVPY 387
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
L +LGQG A V+ RH TG L+ VD RE V++ + H N++
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLKKLNHKNIV 70
Query: 74 QIYEVMASKTKIY--FVMEYAKGGELFKKVSKGK----LKEDTARKYFQQLISAIDFCHS 127
+++ + T + +ME+ G L+ + + L E + ++ ++
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 128 RGVYHRDLKPENLL--LDENG--MLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI 183
G+ HR++KP N++ + E+G + K+TDFG + + Q L+ GT Y+ P++
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY---GTEEYLHPDMY 187
Query: 184 SR--------RGYDGDKADIWSCGVILYVLLAGYLPF 212
R + Y G D+WS GV Y G LPF
Sbjct: 188 ERAVLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPF 223
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 24/265 (9%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXX-XXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
+G+G+F VY + L T +V L + K E ++ +QHPN+++ Y
Sbjct: 34 IGRGSFKTVY--KGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 77 EVMASKTK----IYFVMEYAKGGEL---FKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
+ S K I V E G L K+ K+K R + +Q++ + F H+R
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIK--VLRSWCRQILKGLQFLHTRT 149
Query: 130 --VYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
+ HRDLK +N+ + G +K+ D GL+ L + ++ GTP + APE +
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI----GTPEFXAPEXYEEK 205
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPFHDS-NLMAMYRKIAKA--DYKFPTWFSADVRKLL 243
YD + D+++ G P+ + N +YR++ F +V++++
Sbjct: 206 -YD-ESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEII 263
Query: 244 SRILDPNPSTRISIAKIMENPWFRK 268
+ N R SI ++ + +F++
Sbjct: 264 EGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y +++G G+F VY A+ +G+ V K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74
Query: 72 VMQI----YEVMASKTKIYF--VMEYAKGGELFKKVS------KGKLKEDTARKYFQQLI 119
++++ Y K +Y V++Y E +V+ K L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAIDFCHSRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYV 178
++ + HS G+ HRD+KP+NLLLD + +LK+ DFG SA + + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG-SAKQLVRGEPN-VSXICSR-YYR 189
Query: 179 APEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSAD 238
APE+I D+WS G +L LL G F + + +I K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV-------LGTP 242
Query: 239 VRKLLSRILDPNPSTRISIAKIMENPW 265
R+ + R ++PN T +I +PW
Sbjct: 243 TREQI-REMNPN-YTEFKFPQIKAHPW 267
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
++ ELGR +G+G F V+ ++ V ++ +E MR
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 71
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP+++++ V+ ++ ++ +ME GEL F +V K L + Y QL +A+ +
Sbjct: 72 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 130
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAK----CKHQDGLLHTTCGTPAYVAPEV 182
S+ HRD+ N+L+ N +K+ DFGLS + K G L ++APE
Sbjct: 131 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 185
Query: 183 ISRRGYDGDKADIWSCGVILY-VLLAGYLPFH 213
I+ R + +D+W GV ++ +L+ G PF
Sbjct: 186 INFRRFTS-ASDVWMFGVCMWEILMHGVKPFQ 216
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
++ ELGR +G+G F V+ ++ V ++ +E MR
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 97
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP+++++ V+ ++ ++ +ME GEL F +V K L + Y QL +A+ +
Sbjct: 98 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 156
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAK----CKHQDGLLHTTCGTPAYVAPEV 182
S+ HRD+ N+L+ N +K+ DFGLS + K G L ++APE
Sbjct: 157 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 211
Query: 183 ISRRGYDGDKADIWSCGVILY-VLLAGYLPFH 213
I+ R + +D+W GV ++ +L+ G PF
Sbjct: 212 INFRRFT-SASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 9 MQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQ 68
M++ +L + +G+G F V + G +V + E SVM ++
Sbjct: 11 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLA-------EASVMTQLR 63
Query: 69 HPNVMQIYEVMAS-KTKIYFVMEYAKGGELFKKV-SKGK--LKEDTARKYFQQLISAIDF 124
H N++Q+ V+ K +Y V EY G L + S+G+ L D K+ + A+++
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 123
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVIS 184
HRDL N+L+ E+ + KV+DFGL+ A G L + APE +
Sbjct: 124 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALR 178
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPF 212
+ K+D+WS G++L+ + + G +P+
Sbjct: 179 EAAFS-TKSDVWSFGILLWEIYSFGRVPY 206
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 110/212 (51%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH-P 70
Y+L R LG+G +++V+ A ++ + V LK ++ KREI ++ ++ P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKI------LKPVKKNKIKREIKILENLRGGP 92
Query: 71 NVMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHS 127
N++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 93 NIITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHS 149
Query: 128 RGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE++
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDY 206
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
D+WS G +L ++ PF HD+
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
++ ELGR +G+G F V+ ++ V ++ +E MR
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP+++++ V+ ++ ++ +ME GEL F +V K L + Y QL +A+ +
Sbjct: 75 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 133
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAK----CKHQDGLLHTTCGTPAYVAPEV 182
S+ HRD+ N+L+ N +K+ DFGLS + K G L ++APE
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 188
Query: 183 ISRRGYDGDKADIWSCGVILY-VLLAGYLPFH 213
I+ R + +D+W GV ++ +L+ G PF
Sbjct: 189 INFRRFT-SASDVWMFGVCMWEILMHGVKPFQ 219
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQ 117
E VM + HP ++Q+Y V + I V E+ + G L + + +G +T
Sbjct: 53 EAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 112
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--P 175
+ + + V HRDL N L+ EN ++KV+DFG++ D ++ GT P
Sbjct: 113 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV----LDDQYTSSTGTKFP 168
Query: 176 A-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKF-P 232
+ +PEV S Y K+D+WS GV+++ V G +P+ + + + I+ + P
Sbjct: 169 VKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 227
Query: 233 TWFSADVRKLLSRILDPNPSTRISIAKIM 261
S V ++++ P R + ++++
Sbjct: 228 RLASTHVYQIMNHCWRERPEDRPAFSRLL 256
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
++ ELGR +G+G F V+ ++ V ++ +E MR
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 72
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP+++++ V+ ++ ++ +ME GEL F +V K L + Y QL +A+ +
Sbjct: 73 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 131
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAK----CKHQDGLLHTTCGTPAYVAPEV 182
S+ HRD+ N+L+ N +K+ DFGLS + K G L ++APE
Sbjct: 132 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 186
Query: 183 ISRRGYDGDKADIWSCGVILY-VLLAGYLPFH 213
I+ R + +D+W GV ++ +L+ G PF
Sbjct: 187 INFRRFT-SASDVWMFGVCMWEILMHGVKPFQ 217
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 130/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 104
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V EY + G L F + + + + S + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGL + + + P + +PE I+
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 281
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 336
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 13/225 (5%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQHPN 71
+++G G F +V R G+ LK G D+ +R E S+M HPN
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKR---EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
++ + V+ + + EY + G L F + + G+ + + S + +
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 130
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISRRGY 188
HRDL N+L++ N + KV+DFG+S + + + P + APE I+ R +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 189 DGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFP 232
+D+WS G++++ V+ G P+ D + + + I + Y+ P
Sbjct: 191 T-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLP 233
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 13/225 (5%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQHPN 71
+++G G F +V R G+ LK G D+ +R E S+M HPN
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKR---EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
++ + V+ + + EY + G L F + + G+ + + S + +
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 136
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISRRGY 188
HRDL N+L++ N + KV+DFG+S + + + P + APE I+ R +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 189 DGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFP 232
+D+WS G++++ V+ G P+ D + + + I + Y+ P
Sbjct: 197 T-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLP 239
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 21/200 (10%)
Query: 67 IQHPNVMQIYEVMASKTKI-----YFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISA 121
+ HP+++QI+ + + Y VMEY GG+ K+ KL A Y +++ A
Sbjct: 136 VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKRSKGQKLPVAEAIAYLLEILPA 194
Query: 122 IDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
+ + HS G+ + DLKPEN++L E LK+ D G A+++ + G L+ GTP + APE
Sbjct: 195 LSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLG--AVSRI-NSFGYLY---GTPGFQAPE 247
Query: 182 VISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRK 241
++ R DI++ G L L LP + + + + D T+ S +
Sbjct: 248 IV--RTGPTVATDIYTVGRTLAALTLD-LPTRNGRYV---DGLPEDDPVLKTYDSYG--R 299
Query: 242 LLSRILDPNPSTRISIAKIM 261
LL R +DP+P R + A+ M
Sbjct: 300 LLRRAIDPDPRQRFTTAEEM 319
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 130/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 104
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V E + G L F + + + + S + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGLS + + + P + +PE I+
Sbjct: 165 DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 281
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 336
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 130/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 104
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V E + G L F + + + + S + +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 164
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGLS + + + P + +PE I+
Sbjct: 165 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 225 RKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 281
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 282 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 336
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
++ ELGR +G+G F V+ ++ V ++ +E MR
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP+++++ V+ ++ ++ +ME GEL F +V K L + Y QL +A+ +
Sbjct: 70 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAK----CKHQDGLLHTTCGTPAYVAPEV 182
S+ HRD+ N+L+ +K+ DFGLS + K G L ++APE
Sbjct: 129 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 183
Query: 183 ISRRGYDGDKADIWSCGVILY-VLLAGYLPFH 213
I+ R + +D+W GV ++ +L+ G PF
Sbjct: 184 INFRRFTS-ASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 130/295 (44%), Gaps = 26/295 (8%)
Query: 14 LGRLLGQGNFAKVYYAR-HLGTGQSVXXXXXXXXXXLKVGLVDQTKR----EISVMRLIQ 68
+ +++G G F +V R L + + + LKVG ++ +R E S+M
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT----LKVGYTEKQRRDFLGEASIMGQFD 75
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HPN++++ V+ + V E + G L F + + + + S + +
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISR 185
G HRDL N+L++ N + KV+DFGLS + + + P + +PE I+
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 186 RGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
R + +D+WS G++L+ V+ G P+ + + + + + + Y+ P L
Sbjct: 196 RKFTS-ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLPPPMDCPA-ALYQ 252
Query: 245 RILD---------PNPSTRISIA-KIMENPWFRKGLNSKSAKSKTAIKESSLVDV 289
+LD P +SI K++ NP K + S +A+ + + S VD+
Sbjct: 253 LMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDI 307
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 12/194 (6%)
Query: 49 LKVGLVDQTKR----EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVS 102
LK G ++ +R E S+M HPNV+ + V+ T + + E+ + G L F + +
Sbjct: 43 LKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN 102
Query: 103 KGKLKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCK 162
G+ + + + + + HR L N+L++ N + KV+DFGLS +
Sbjct: 103 DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDD 162
Query: 163 HQDGLLHTTCGTPA---YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLM 218
D + G + APE I R + +D+WS G++++ V+ G P+ D
Sbjct: 163 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTS-ASDVWSYGIVMWEVMSYGERPYWDMTNQ 221
Query: 219 AMYRKIAKADYKFP 232
+ I + DY+ P
Sbjct: 222 DVINAIEQ-DYRLP 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV-DQTKREISVMRLIQ 68
++ ELGR +G+G F V+ ++ V ++ +E MR
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
HP+++++ V+ ++ ++ +ME GEL F +V K L + Y QL +A+ +
Sbjct: 450 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAK----CKHQDGLLHTTCGTPAYVAPEV 182
S+ HRD+ N+L+ +K+ DFGLS + K G L ++APE
Sbjct: 509 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI-----KWMAPES 563
Query: 183 ISRRGYDGDKADIWSCGVILY-VLLAGYLPFH 213
I+ R + +D+W GV ++ +L+ G PF
Sbjct: 564 INFRRFTS-ASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG+G+F +V+ + TG KV L E+ + P ++ +Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLYG 131
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRGVYHRDLK 136
+ + ME +GG L + + + G L ED A Y Q + +++ H+R + H D+K
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 137 PENLLLDENG-MLKVTDFGLSALAKCKHQDGLLHTTC------GTPAYVAPEVISRRGYD 189
+N+LL +G + DFG A C DGL + GT ++APEV+ + D
Sbjct: 192 ADNVLLSSDGSRAALCDFG---HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 190 GDKADIWSCGVILYVLLAGYLPF 212
K DIWS ++ +L G P+
Sbjct: 249 A-KVDIWSSCCMMLHMLNGCHPW 270
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 23/247 (9%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
L+G G F KVY L G V + + +S R HP+++ +
Sbjct: 46 LIGHGVFGKVYKGV-LRDGAKVALKRRTPESSQGIEEFETEIETLSFCR---HPHLVSLI 101
Query: 77 EVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLIS-------AIDFCHSRG 129
+ ++ + +Y + G L + + L T ++Q + + + H+R
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYGSDLP--TMSMSWEQRLEICIGAARGLHYLHTRA 159
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD 189
+ HRD+K N+LLDEN + K+TDFG+S Q L GT Y+ PE +G
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFI-KGRL 218
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTW-FSADVRKLLSRILD 248
+K+D++S GV+L+ +L A+ + + + W + L +I+D
Sbjct: 219 TEKSDVYSFGVVLFEVLCAR--------SAIVQSLPREMVNLAEWAVESHNNGQLEQIVD 270
Query: 249 PNPSTRI 255
PN + +I
Sbjct: 271 PNLADKI 277
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQH 69
Y + L+G+G++ VY A T ++V L+D + REI+++ ++
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE---DLIDCKRILREITILNRLKS 84
Query: 70 PNVMQIYEVMASKT-----KIYFVMEYAKGGELFKKVSKGK--LKEDTARKYFQQLISAI 122
++++Y+++ ++Y V+E A KK+ K L E+ + L+
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEIADSD--LKKLFKTPIFLTEEHIKTILYNLLLGE 142
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCK-----------------HQD 165
+F H G+ HRDLKP N LL+++ +KV DFGL+ + H
Sbjct: 143 NFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 166 GL---LHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLL 206
L L + T Y APE+I + DIWS G I LL
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 16 RLLGQGNFAKV----YYARHLGTGQSVXXXXXXXXXXLKVGLVDQT----KREISVMRLI 67
R LG+G+F KV Y + GTG+ V LK Q K+EI ++R +
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA------LKADAGPQHRSGWKQEIDILRTL 90
Query: 68 QHPNVMQIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFC 125
H ++++ A + VMEY G L + + + + QQ+ + +
Sbjct: 91 YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYL 150
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVIS 184
H++ HRDL N+LLD + ++K+ DFGL+ H+ + +P + APE +
Sbjct: 151 HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 185 RRGYDGDKADIWSCGVILYVLL 206
+ +D+WS GV LY LL
Sbjct: 211 EYKFY-YASDVWSFGVTLYELL 231
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 63 VMRLIQHPNVMQIYEVMASKTKIYFVME-----YAKGGELFKKVSKGKLKEDTARKYFQQ 117
VMR P ++Q Y + + + ME + K + V + E+ K
Sbjct: 74 VMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLA 133
Query: 118 LISAIDFC-HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT-TCGTP 175
+ A++ + + HRD+KP N+LLD +G +K+ DFG+S + D + T G
Sbjct: 134 TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG----QLVDSIAKTRDAGCR 189
Query: 176 AYVAPEVI----SRRGYDGDKADIWSCGVILYVLLAGYLPFHDSN 216
Y+APE I SR+GYD ++D+WS G+ LY L G P+ N
Sbjct: 190 PYMAPERIDPSASRQGYDV-RSDVWSLGITLYELATGRFPYPKWN 233
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
+G+G+F +V+ + TG KV L E+ + P ++ +Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLYG 133
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRGVYHRDLK 136
+ + ME +GG L + + + G L ED A Y Q + +++ H+R + H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 137 PENLLLDENG-MLKVTDFGLSALAKCKHQDGLLHTTC------GTPAYVAPEVISRRGYD 189
+N+LL +G + DFG A C DGL + GT ++APEV+ + D
Sbjct: 194 ADNVLLSSDGSRAALCDFG---HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 190 GDKADIWSCGVILYVLLAGYLPF 212
K DIWS ++ +L G P+
Sbjct: 251 A-KVDIWSSCCMMLHMLNGCHPW 272
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
+G+G+F +V+ + TG KV L E+ + P ++ +Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLYG 117
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKYFQQLISAIDFCHSRGVYHRDLK 136
+ + ME +GG L + + + G L ED A Y Q + +++ H+R + H D+K
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 137 PENLLLDENG-MLKVTDFGLSALAKCKHQDGLLHTTC------GTPAYVAPEVISRRGYD 189
+N+LL +G + DFG A C DGL + GT ++APEV+ + D
Sbjct: 178 ADNVLLSSDGSRAALCDFG---HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 190 GDKADIWSCGVILYVLLAGYLPF 212
K DIWS ++ +L G P+
Sbjct: 235 A-KVDIWSSCCMMLHMLNGCHPW 256
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 23/247 (9%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
L+G G F KVY L G V + + +S R HP+++ +
Sbjct: 46 LIGHGVFGKVYKGV-LRDGAKVALKRRTPESSQGIEEFETEIETLSFCR---HPHLVSLI 101
Query: 77 EVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLIS-------AIDFCHSRG 129
+ ++ + +Y + G L + + L T ++Q + + + H+R
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHLYGSDLP--TMSMSWEQRLEICIGAARGLHYLHTRA 159
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYD 189
+ HRD+K N+LLDEN + K+TDFG+S Q L GT Y+ PE +G
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI-KGRL 218
Query: 190 GDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTW-FSADVRKLLSRILD 248
+K+D++S GV+L+ +L A+ + + + W + L +I+D
Sbjct: 219 TEKSDVYSFGVVLFEVLCAR--------SAIVQSLPREMVNLAEWAVESHNNGQLEQIVD 270
Query: 249 PNPSTRI 255
PN + +I
Sbjct: 271 PNLADKI 277
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 22/216 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
+YE+ +++G+G+F +V A Q V Q EI ++ ++
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 71 ------NVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAI 122
NV+ + E + I E EL KK RK+ ++ +
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 123 DFCHSRGVYHRDLKPENLLLDENGM--LKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
D H + H DLKPEN+LL + G +KV DFG S +HQ ++T + Y AP
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQR--VYTXIQSRFYRAP 268
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGY--LPFHD 214
EVI Y G D+WS G IL LL GY LP D
Sbjct: 269 EVILGARY-GMPIDMWSLGCILAELLTGYPLLPGED 303
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 242 LLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAIK 282
L + L+ +P+ R++ + + +PW R+ L KT++K
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPTGEKTSVK 428
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 22/216 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
+YE+ +++G+G+F +V A Q V Q EI ++ ++
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 71 ------NVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAI 122
NV+ + E + I E EL KK RK+ ++ +
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 123 DFCHSRGVYHRDLKPENLLLDENGM--LKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
D H + H DLKPEN+LL + G +KV DFG S +HQ ++T + Y AP
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQR--VYTXIQSRFYRAP 268
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGY--LPFHD 214
EVI Y G D+WS G IL LL GY LP D
Sbjct: 269 EVILGARY-GMPIDMWSLGCILAELLTGYPLLPGED 303
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 29/294 (9%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + F S
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K D +H G P ++A E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVKWMALESLQ 211
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLL 243
+ + K+D+WS GV+L+ L+ G P+ D N + T + R+LL
Sbjct: 212 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDI------------TVYLLQGRRLL 258
Query: 244 SRILDPNPSTRISI----AKIMENPWFRKGLNSKSAKSKTAIKESSLVDVDAAF 293
P+P + + K P F + ++ SA T I E V V+A +
Sbjct: 259 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE-HYVHVNATY 311
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + F S
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 210
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K D +H G P ++A E +
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVKWMALESLQ 269
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 270 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 301
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + F S
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 149
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K D +H G P ++A E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVKWMALESLQ 208
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 209 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + F S
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K D +H G P ++A E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDS-VHNKTGAKLPVKWMALESLQ 211
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 212 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 243
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 29/294 (9%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + F S
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 156
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K D +H G P ++A E +
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVKWMALESLQ 215
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLL 243
+ + K+D+WS GV+L+ L+ G P+ D N + T + R+LL
Sbjct: 216 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDI------------TVYLLQGRRLL 262
Query: 244 SRILDPNPSTRISI----AKIMENPWFRKGLNSKSAKSKTAIKESSLVDVDAAF 293
P+P + + K P F + ++ SA T I E V V+A +
Sbjct: 263 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE-HYVHVNATY 315
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 29/294 (9%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + F S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K D +H G P ++A E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVKWMALESLQ 210
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLL 243
+ + K+D+WS GV+L+ L+ G P+ D N + T + R+LL
Sbjct: 211 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDI------------TVYLLQGRRLL 257
Query: 244 SRILDPNPSTRISI----AKIMENPWFRKGLNSKSAKSKTAIKESSLVDVDAAF 293
P+P + + K P F + ++ SA T I E V V+A +
Sbjct: 258 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE-HYVHVNATY 310
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + F S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K D +H G P ++A E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVKWMALESLQ 210
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 211 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 16 RLLGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
R LG+GNF V R+ TG+ V + +REI +++ +QH N
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDN 75
Query: 72 VMQIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHS 127
+++ V A + + +ME+ G L + + K K + D + +Y Q+ +++ +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRR 186
+ HRDL N+L++ +K+ DFGL+ + + + +P + APE ++
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 187 GYDGDKADIWSCGVILYVLLA 207
+ +D+WS GV+LY L
Sbjct: 196 KFSV-ASDVWSFGVVLYELFT 215
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
L + LG G F +V+ + + + ++ L E ++M+ +QH ++
Sbjct: 17 LVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFL-----EEANLMKTLQHDKLV 71
Query: 74 QIYEVMASKTKIYFVMEYAKGGELF---KKVSKGKLKEDTARKYFQQLISAIDFCHSRGV 130
++Y V+ + IY + EY G L K GK+ + Q+ + + +
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 131
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRG 187
HRDL+ N+L+ E+ M K+ DFGL+ + +D G + APE I+ G
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVI----EDNEYTAREGAKFPIKWTAPEAIN-FG 186
Query: 188 YDGDKADIWSCGVILY-VLLAGYLPF 212
K+D+WS G++LY ++ G +P+
Sbjct: 187 CFTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 51 VGLVDQTKREISVMRLIQHPNVMQIYEVMASKT--KIYFVMEYAKGGEL----FKKVSKG 104
G+ REI+++R ++HPNV+ + +V S K++ + +YA+ F + SK
Sbjct: 59 TGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKA 118
Query: 105 -----KLKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLL----DENGMLKVTDFGL 155
+L + Q++ I + H+ V HRDLKP N+L+ E G +K+ D G
Sbjct: 119 NKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 178
Query: 156 SALAKCKHQD-GLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFH 213
+ L + L T Y APE++ + DIW+ G I LL FH
Sbjct: 179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK---REISVMRLIQHPNVMQ 74
LG+GNF V R+ G + L+ DQ + REI +++ + H + +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL-HSDFIV 71
Query: 75 IYEVMA---SKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK--YFQQLISAIDFCHSRG 129
Y ++ + ++ VMEY G L + + + + D +R Y Q+ +++ SR
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ L ++ +P + APE +S +
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF 191
Query: 189 DGDKADIWSCGVILYVLL 206
++D+WS GV+LY L
Sbjct: 192 -SRQSDVWSFGVVLYELF 208
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 78
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 79 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 138
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 198
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 199 SV-ASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 77
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 198 SV-ASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 81
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 82 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 141
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 201
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 202 SV-ASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 80
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 81 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 140
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 200
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 201 SV-ASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 79
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 80 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 139
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 199
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 200 SV-ASDVWSFGVVLYELFT 217
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 43/232 (18%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKV--GLVDQTK--REISVMRL 66
+YE+ L+G G++ V A + L+V L+D + REI+++
Sbjct: 54 RYEIRHLIGTGSYGHVCEAY-----DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNR 108
Query: 67 IQHPNVMQIYEVMASKT-----KIYFVMEYAKGGELFKKVSKGK--LKEDTARKYFQQLI 119
+ H +V+++ +++ K ++Y V+E A FKK+ + L E + L+
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTLLYNLL 166
Query: 120 SAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLS----------------------A 157
+ + HS G+ HRDLKP N L++++ +KV DFGL+
Sbjct: 167 VGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 158 LAKCKHQDGLLHTTCG---TPAYVAPEVISRRGYDGDKADIWSCGVILYVLL 206
L H L G T Y APE+I + + D+WS G I LL
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 230 KFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWFRK 268
+FP SAD LL R+L NP+ RI+I + + +P+F++
Sbjct: 365 RFPAS-SADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 105
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 165
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 225
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 226 SV-ASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 73
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 133
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 193
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 194 SV-ASDVWSFGVVLYELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 74
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 195 -SVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 74
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 195 SV-ASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 72
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 192
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 193 SV-ASDVWSFGVVLYELFT 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 92
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 213 SV-ASDVWSFGVVLYELFT 230
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 11/204 (5%)
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTARKYFQQLISAIDFC 125
QHP +++ + +Y E G L + L E Y + + A+
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL 173
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISR 185
HS+G+ H D+KP N+ L G K+ DFGL G G P Y+APE++
Sbjct: 174 HSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA---GAGEVQEGDPRYMAPELL-- 228
Query: 186 RGYDGDKADIWSCGV-ILYVLLAGYLPFHDSNLMAMYRKIAKADYKFPTWFSADVRKLLS 244
+G G AD++S G+ IL V LP + + + F S+++R +L
Sbjct: 229 QGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPE--FTAGLSSELRSVLV 286
Query: 245 RILDPNPSTRISIAKIMENPWFRK 268
+L+P+P R + ++ P R+
Sbjct: 287 MMLEPDPKLRATAEALLALPVLRQ 310
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 27/266 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISV-----MRLIQHPNV 72
LG+G + V RH+ +GQ ++ + Q ++ + R + P
Sbjct: 42 LGRGAYGVVEKXRHVPSGQ------IXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFT 95
Query: 73 MQIYEVMASKTKIYFVMEYAKGG--ELFKKV-SKGK-LKEDTARKYFQQLISAIDFCHSR 128
+ Y + + ++ E + +K+V KG+ + ED K ++ A++ HS+
Sbjct: 96 VTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 155
Query: 129 -GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVI---- 183
V HRD+KP N+L++ G +K DFG+S D G Y APE I
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGISGYLV---DDVAKDIDAGCKPYXAPERINPEL 212
Query: 184 SRRGYDGDKADIWSCGVILYVLLAGYLPFHD--SNLMAMYRKIAKADYKFPT-WFSADVR 240
+++GY K+DIWS G+ L P+ + + + + + + P FSA+
Sbjct: 213 NQKGYSV-KSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFV 271
Query: 241 KLLSRILDPNPSTRISIAKIMENPWF 266
S+ L N R + ++ ++P+F
Sbjct: 272 DFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 92
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 213 SV-ASDVWSFGVVLYELFT 230
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 37/227 (16%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQH 69
YE+ L+G+G++ VY A ++V L+D + REI+++ ++
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFE---DLIDCKRILREITILNRLKS 86
Query: 70 PNVMQIYEVMASKT-----KIYFVMEYAKGGELFKKVSKGK--LKEDTARKYFQQLISAI 122
++++++++ + ++Y V+E A KK+ K L E + L+
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLEIADSD--LKKLFKTPIFLTEQHVKTILYNLLLGE 144
Query: 123 DFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCK-------------------- 162
F H G+ HRDLKP N LL+++ +K+ DFGL+
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 163 HQDGL---LHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLL 206
H L L + T Y APE+I + + DIWS G I LL
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T++++S +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++EYA G L +V + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++K+ DFGL+ + D
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNID 211
Query: 166 GLLHTTCG-TPA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKREISVMRLIQHPNVMQI 75
LG G F V Y + G +K G + D+ E VM + H ++Q+
Sbjct: 16 LGTGQFGVVKYGKWRGQ-------YDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 68
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGVYHR 133
Y V + I+ + EY G L + + + + T + + + + A+++ S+ HR
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 128
Query: 134 DLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYDG 190
DL N L+++ G++KV+DFGLS D ++ G+ + PEV+ +
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSKF-S 183
Query: 191 DKADIWSCGVILYVLLA-GYLPF----------HDSNLMAMYRKIAKADYKFPTWFS--- 236
K+DIW+ GV+++ + + G +P+ H + + +YR ++ + +S
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWH 243
Query: 237 --ADVRK----LLSRILD 248
AD R LLS ILD
Sbjct: 244 EKADERPTFKILLSNILD 261
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT-------LKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY VMEY G L F K GK L+ Q+ S + + H
Sbjct: 79 YAVV-SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY 216
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 16 RLLGQGNFAKV----YYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----REISVMRLI 67
R LG+G+F KV Y + GTG+ V LK G Q + REI ++R +
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA------LKEGCGPQLRSGWQREIEILRTL 68
Query: 68 QHPNVMQIYEVMASKTK--IYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFC 125
H ++++ + + + VMEY G L + + + + QQ+ + +
Sbjct: 69 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYL 128
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVIS 184
H++ HR L N+LLD + ++K+ DFGL+ H+ + +P + APE +
Sbjct: 129 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPFHDSN 216
+ +D+WS GV LY LL + DSN
Sbjct: 189 ECKFY-YASDVWSFGVTLYELLT----YCDSN 215
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 39/258 (15%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKREISVMRLIQHPNVMQI 75
LG G F V Y + G +K G + D+ E VM + H ++Q+
Sbjct: 32 LGTGQFGVVKYGKWRGQ-------YDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGVYHR 133
Y V + I+ + EY G L + + + + T + + + + A+++ S+ HR
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 134 DLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVISRRGYDG 190
DL N L+++ G++KV+DFGLS D ++ G+ P + PEV+ +
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSKF-S 199
Query: 191 DKADIWSCGVILYVLLA-GYLPF----------HDSNLMAMYRKIAKADYKFPTWFS--- 236
K+DIW+ GV+++ + + G +P+ H + + +YR ++ + +S
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWH 259
Query: 237 --ADVRK----LLSRILD 248
AD R LLS ILD
Sbjct: 260 EKADERPTFKILLSNILD 277
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T++++S +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++EYA G L +V + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++K+ DFGL+ + D
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNID 211
Query: 166 GLLHTTCG-TPA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 16 RLLGQGNFAKV----YYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----REISVMRLI 67
R LG+G+F KV Y + GTG+ V LK G Q + REI ++R +
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA------LKEGCGPQLRSGWQREIEILRTL 67
Query: 68 QHPNVMQIYEVMASKTK--IYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFC 125
H ++++ + + + VMEY G L + + + + QQ+ + +
Sbjct: 68 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYL 127
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVIS 184
H++ HR L N+LLD + ++K+ DFGL+ H+ + +P + APE +
Sbjct: 128 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPFHDSN 216
+ +D+WS GV LY LL + DSN
Sbjct: 188 ECKFY-YASDVWSFGVTLYELLT----YCDSN 214
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKREISVMRLIQHPNVMQI 75
LG G F V Y + G +K G + D+ E VM + H ++Q+
Sbjct: 12 LGTGQFGVVKYGKWRGQ-------YDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGVYHR 133
Y V + I+ + EY G L + + + + T + + + + A+++ S+ HR
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 124
Query: 134 DLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYDG 190
DL N L+++ G++KV+DFGLS D ++ G+ + PEV+ +
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSKF-S 179
Query: 191 DKADIWSCGVILYVLLA-GYLPF----------HDSNLMAMYRKIAKADYKFPTWFS--- 236
K+DIW+ GV+++ + + G +P+ H + + +YR ++ + +S
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWH 239
Query: 237 --ADVRK----LLSRILD 248
AD R LLS ILD
Sbjct: 240 EKADERPTFKILLSNILD 257
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ I+H ++Q+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT-------LKPGTMSPEAFLQEAQVMKKIRHEKLVQL 78
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 79 YAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 16 RLLGQGNFAKV----YYARHLGTGQSVXXXXXXXXXXLKVGLVDQT----KREISVMRLI 67
R LG+G+F KV Y + GTG+ V LK Q K+EI ++R +
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA------LKADCGPQHRSGWKQEIDILRTL 73
Query: 68 QHPNVMQIYEVMASKTK--IYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFC 125
H ++++ + + + VMEY G L + + + + QQ+ + +
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYL 133
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVIS 184
HS+ HR+L N+LLD + ++K+ DFGL+ H+ + +P + APE +
Sbjct: 134 HSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 185 RRGYDGDKADIWSCGVILYVLLA 207
+ +D+WS GV LY LL
Sbjct: 194 EYKF-YYASDVWSFGVTLYELLT 215
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKREISVMRLIQHPNVMQI 75
LG G F V Y + G +K G + D+ E VM + H ++Q+
Sbjct: 23 LGTGQFGVVKYGKWRGQ-------YDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGVYHR 133
Y V + I+ + EY G L + + + + T + + + + A+++ S+ HR
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 135
Query: 134 DLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYDG 190
DL N L+++ G++KV+DFGLS D ++ G+ + PEV+ +
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSKF-S 190
Query: 191 DKADIWSCGVILYVLLA-GYLPF----------HDSNLMAMYRKIAKADYKFPTWFS--- 236
K+DIW+ GV+++ + + G +P+ H + + +YR ++ + +S
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWH 250
Query: 237 --ADVRK----LLSRILD 248
AD R LLS ILD
Sbjct: 251 EKADERPTFKILLSNILD 268
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT-------LKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V+EY G L F K GK L+ Q+ S + + H
Sbjct: 79 YAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP-AYVAPEVISRRGYDGD 191
RDL+ N+L+ EN + KV DFGL+ L + + P + APE + G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEA-ALYGRFTI 194
Query: 192 KADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 195 KSDVWSFGILLTELTTKGRVPY 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKREISVMRLIQHPNVMQI 75
LG G F V Y + G +K G + D+ E VM + H ++Q+
Sbjct: 17 LGTGQFGVVKYGKWRGQ-------YDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGVYHR 133
Y V + I+ + EY G L + + + + T + + + + A+++ S+ HR
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 134 DLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYDG 190
DL N L+++ G++KV+DFGLS D ++ G+ + PEV+ +
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSVGSKFPVRWSPPEVLMYSKF-S 184
Query: 191 DKADIWSCGVILYVLLA-GYLPF----------HDSNLMAMYRKIAKADYKFPTWFS--- 236
K+DIW+ GV+++ + + G +P+ H + + +YR ++ + +S
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWH 244
Query: 237 --ADVRK----LLSRILD 248
AD R LLS ILD
Sbjct: 245 EKADERPTFKILLSNILD 262
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 129/283 (45%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T++++S +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++EYA G L +V + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++K+ DFGL+ + D
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNID 211
Query: 166 GLLHTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
+TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 244
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 245 YAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 358
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPY 382
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT-------LKPGTMSPEAFLQEAQVMKKLRHEKLVQL 75
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 76 YAVV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP-AYVAPEVISRRGYDGD 191
RDL+ N+L+ EN + KV DFGL+ L + + P + APE + G
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEA-ALYGRFTI 191
Query: 192 KADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 192 KSDVWSFGILLTELTTKGRVPY 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT-------LKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V+EY G L F K GK L+ Q+ S + + H
Sbjct: 79 YAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY 216
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 244
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 245 YAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 358
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPY 382
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 49/263 (18%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKREISVMRLIQHPNVMQI 75
LG G F V Y + G +K G + D+ E VM + H ++Q+
Sbjct: 32 LGTGQFGVVKYGKWRGQ-------YDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLIS-------AIDFCHSR 128
Y V + I+ + EY G L L+E R QQL+ A+++ S+
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNY-----LREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVISR 185
HRDL N L+++ G++KV+DFGLS D ++ G+ P + PEV+
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV----LDDEETSSVGSKFPVRWSPPEVLMY 195
Query: 186 RGYDGDKADIWSCGVILYVLLA-GYLPF----------HDSNLMAMYRKIAKADYKFPTW 234
+ K+DIW+ GV+++ + + G +P+ H + + +YR ++ +
Sbjct: 196 SKF-SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIM 254
Query: 235 FS-----ADVRK----LLSRILD 248
+S AD R LLS ILD
Sbjct: 255 YSCWHEKADERPTFKILLSNILD 277
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 118/268 (44%), Gaps = 30/268 (11%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM-RLIQHPNVMQI 75
++G+GNF +V AR G + E+ V+ +L HPN++ +
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGKLKE---------DTARKYF-QQLI------ 119
+ +Y +EYA G L + K ++ E TA QQL+
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 120 -SAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT-PA- 176
+D+ + HRDL N+L+ EN + K+ DFGLS + Q+ + T G P
Sbjct: 152 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS-----RGQEVYVKKTMGRLPVR 206
Query: 177 YVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKFPTWF 235
++A E ++ Y + +D+WS GV+L+ +++ G P+ +Y K+ + Y+
Sbjct: 207 WMAIESLNYSVYTTN-SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPL 264
Query: 236 SAD--VRKLLSRILDPNPSTRISIAKIM 261
+ D V L+ + P R S A+I+
Sbjct: 265 NCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 275 LGQGCFGEVWMGTWNGTTR-------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 327
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 328 YAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 386
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 441
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 442 TIKSDVWSFGILLTELTTKGRVPY 465
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 91/216 (42%), Gaps = 22/216 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
+YE+ +++G+G F +V A Q V Q EI ++ ++
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 71 ------NVMQIYEVMASKTKIYFVMEYAKGG--ELFKKVSKGKLKEDTARKYFQQLISAI 122
NV+ + E + I E EL KK RK+ ++ +
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 123 DFCHSRGVYHRDLKPENLLLDENGM--LKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAP 180
D H + H DLKPEN+LL + G +KV DFG S +HQ ++ + Y AP
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQR--VYXXIQSRFYRAP 268
Query: 181 EVISRRGYDGDKADIWSCGVILYVLLAGY--LPFHD 214
EVI Y G D+WS G IL LL GY LP D
Sbjct: 269 EVILGARY-GMPIDMWSLGCILAELLTGYPLLPGED 303
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 242 LLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKTAIK 282
L + L+ +P+ R++ + + +PW R+ L KT++K
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPTGEKTSVK 428
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 138/355 (38%), Gaps = 94/355 (26%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQ--TK 58
+ET K KY LG+ LG G+F V + +G+ LK L D
Sbjct: 2 LETSSK----KYSLGKTLGTGSFGIVCEVFDIESGKRFA---------LKKVLQDPRYKN 48
Query: 59 REISVMRLIQHPNVMQIYE-------------------------------------VMAS 81
RE+ +M+++ H N++++ + V S
Sbjct: 49 RELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPS 108
Query: 82 KTK-IYFVMEYAKGGELFKKVSKGKLKE------DTARKYFQQLISAIDFCHSRGVYHRD 134
+ K + +MEY + KV K ++ + Y QL A+ F HS G+ HRD
Sbjct: 109 QNKYLNVIMEYVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRD 166
Query: 135 LKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKA 193
+KP+NLL++ ++ LK+ DFG + K + + C Y APE++
Sbjct: 167 IKPQNLLVNSKDNTLKLCDFG--SAKKLIPSEPSVAXICSR-FYRAPELMLGATEYTPSI 223
Query: 194 DIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAK-----------------ADYKFPTWFS 236
D+WS G + L+ G F + +I + + +FPT +
Sbjct: 224 DLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKA 283
Query: 237 ADVRK------------LLSRILDPNPSTRISIAKIMENPWFRKGLNSKSAKSKT 279
D RK LL +IL P RI+ + M +P+F NS ++ K
Sbjct: 284 KDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKN 338
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------VMRL 66
LG+ LG+G F +V A +G + +K+ D T++++S +M++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 89
Query: 67 I-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-------------FKKVSKGKLKEDTAR 112
I +H N++ + +Y ++EYA G L F +E +
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 113 KYF----QQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLL 168
K Q+ +++ S+ HRDL N+L+ E+ ++K+ DFGL+ H D
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDXXK 207
Query: 169 HTTCG-TPA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIA 225
TT G P ++APE + R Y ++D+WS GV+L+ + G P+ + ++ K+
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLL 265
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K ++ P+ + ++ ++ PS R + +++E+
Sbjct: 266 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV--SKGKLKEDTARK 113
+ +RE+ +M + HPN++++Y +M + ++ VME+ G+L+ ++ +K +
Sbjct: 69 EFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLR 126
Query: 114 YFQQLISAIDFCHSRG--VYHRDLKPENLL---LDENGML--KVTDFGLSALAKCKHQDG 166
+ I++ ++ + HRDL+ N+ LDEN + KV DFGLS G
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-QSVHSVSG 185
Query: 167 LLHTTCGTPAYVAPEVIS--RRGYDGDKADIWSCGVILYVLLAGYLPFHD 214
LL G ++APE I Y +KAD +S +ILY +L G PF +
Sbjct: 186 LL----GNFQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDE 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 74
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 195 SV-ASDVWSFGVVLYELFT 212
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 118/268 (44%), Gaps = 30/268 (11%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM-RLIQHPNVMQI 75
++G+GNF +V AR G + E+ V+ +L HPN++ +
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGKLKE---------DTARKYF-QQLI------ 119
+ +Y +EYA G L + K ++ E TA QQL+
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 120 -SAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA- 176
+D+ + HRDL N+L+ EN + K+ DFGLS + Q+ + T G P
Sbjct: 142 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS-----RGQEVYVKKTMGRLPVR 196
Query: 177 YVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKFPTWF 235
++A E ++ Y + +D+WS GV+L+ +++ G P+ +Y K+ + Y+
Sbjct: 197 WMAIESLNYSVYTTN-SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPL 254
Query: 236 SAD--VRKLLSRILDPNPSTRISIAKIM 261
+ D V L+ + P R S A+I+
Sbjct: 255 NCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 101/251 (40%), Gaps = 41/251 (16%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYA-RHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISV 63
G VL +YE+ LG+G F KV H G+ V + + EI V
Sbjct: 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY----CEAARSEIQV 64
Query: 64 MRLIQ--HPN----VMQIYEVMASKTKIYFVMEYA--KGGELFKKVSKGKLKEDTARKYF 115
+ + PN +Q+ E I V E + K+ + D RK
Sbjct: 65 LEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 116 QQLISAIDFCHSRGVYHRDLKPENLLL---------------DE----NGMLKVTDFGLS 156
Q+ +++F HS + H DLKPEN+L DE N +KV DFG S
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG-S 183
Query: 157 ALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGY--LPFHD 214
A +H L+ T Y APEVI G+ D+WS G IL G+ P HD
Sbjct: 184 ATYDDEHHSTLV----STRHYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVFPTHD 238
Query: 215 S-NLMAMYRKI 224
S +AM +I
Sbjct: 239 SKEHLAMMERI 249
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKT-------LKPGTMSPEAFLQEAQVMKKLRHEKLVQL 71
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 72 YAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 130
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 185
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 186 TIKSDVWSFGILLTELTTKGRVPY 209
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T++++S +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++EYA G L +V + +
Sbjct: 94 MKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++K+ DFGL+ + D
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNID 211
Query: 166 GLLHTTCG-TPA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 2 ETKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKR 59
E + +V + +L LG G F +V+ + G + LK G + D
Sbjct: 7 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLKQGSMSPDAFLA 59
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQ 116
E ++M+ +QH ++++Y V+ ++ IY + EY + G L F K G KL +
Sbjct: 60 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 118
Query: 117 QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA 176
Q+ + F R HRDL+ N+L+ + K+ DFGL+ L + + P
Sbjct: 119 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPI 176
Query: 177 -YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+D+WS G++L ++ G +P+
Sbjct: 177 KWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK---REISVMRLIQHPNVMQ 74
LG+GNF V R+ G + L+ DQ + REI +++ + H + +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL-HSDFIV 74
Query: 75 IYEVMA---SKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK--YFQQLISAIDFCHSRG 129
Y ++ + + VMEY G L + + + + D +R Y Q+ +++ SR
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ L ++ +P + APE +S +
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 194
Query: 189 DGDKADIWSCGVILYVLL 206
++D+WS GV+LY L
Sbjct: 195 -SRQSDVWSFGVVLYELF 211
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 75
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 76 YAVV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 189
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPY 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 2 ETKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKR 59
E + +V + +L LG G F +V+ + G + LK G + D
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-------LKQGSMSPDAFLA 57
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQ 116
E ++M+ +QH ++++Y V+ ++ IY + EY + G L F K G KL +
Sbjct: 58 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 117 QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA 176
Q+ + F R HRDL+ N+L+ + K+ DFGL+ L + + P
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPI 174
Query: 177 -YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+D+WS G++L ++ G +P+
Sbjct: 175 KWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T++++S +
Sbjct: 82 KLTLGKPLGEGCFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 139
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++EYA G L +V + +
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++K+ DFGL+ + D
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNID 257
Query: 166 GLLHTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 315
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 316 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 2 ETKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKR 59
E + +V + +L LG G F +V+ + G + LK G + D
Sbjct: 6 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-------VAVKSLKQGSMSPDAFLA 58
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQ 116
E ++M+ +QH ++++Y V+ ++ IY + EY + G L F K G KL +
Sbjct: 59 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 117
Query: 117 QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA 176
Q+ + F R HRDL+ N+L+ + K+ DFGL+ L + + P
Sbjct: 118 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPI 175
Query: 177 -YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+D+WS G++L ++ G +P+
Sbjct: 176 KWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T++++S +
Sbjct: 28 KLTLGKPLGEGCFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 85
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++EYA G L +V + +
Sbjct: 86 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++K+ DFGL+ + D
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNID 203
Query: 166 GLLHTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 261
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 262 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 304
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T++++S +
Sbjct: 25 KLTLGKPLGEGCFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 82
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++EYA G L +V + +
Sbjct: 83 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++K+ DFGL+ + D
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNID 200
Query: 166 GLLHTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 258
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 259 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 301
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T++++S +
Sbjct: 23 KLTLGKPLGEGCFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 80
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++EYA G L +V + +
Sbjct: 81 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++K+ DFGL+ + D
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA--RDINNID 198
Query: 166 GLLHTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 256
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 257 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 299
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKT-------LKPGTMSPEAFLQEAQVMKKLRHEKLVQL 69
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 70 YAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 183
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 184 TIKSDVWSFGILLTELTTKGRVPY 207
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 2 ETKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKR 59
E + +V + +L LG G F +V+ + G + LK G + D
Sbjct: 11 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-------LKQGSMSPDAFLA 63
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQ 116
E ++M+ +QH ++++Y V+ ++ IY + EY + G L F K G KL +
Sbjct: 64 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 117 QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP- 175
Q+ + F R HRDL+ N+L+ + K+ DFGL+ L + + P
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPI 180
Query: 176 AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+D+WS G++L ++ G +P+
Sbjct: 181 KWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 39/258 (15%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKREISVMRLIQHPNVMQI 75
LG G F V Y + G +K G + D+ E VM + H ++Q+
Sbjct: 17 LGTGQFGVVKYGKWRGQ-------YDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRGVYHR 133
Y V + I+ + EY G L + + + + T + + + + A+++ S+ HR
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 134 DLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYDG 190
DL N L+++ G++KV+DFGLS D ++ G+ + PEV+ +
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYV----LDDEYTSSRGSKFPVRWSPPEVLMYSKF-S 184
Query: 191 DKADIWSCGVILYVLLA-GYLPF----------HDSNLMAMYRKIAKADYKFPTWFS--- 236
K+DIW+ GV+++ + + G +P+ H + + +YR ++ + +S
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWH 244
Query: 237 --ADVRK----LLSRILD 248
AD R LLS ILD
Sbjct: 245 EKADERPTFKILLSNILD 262
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKT-------LKPGTMSPEAFLQEAQVMKKLRHEKLVQL 67
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 68 YAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 126
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 181
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 182 TIKSDVWSFGILLTELTTKGRVPY 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 2 ETKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKR 59
E + +V + +L LG G F +V+ + G + LK G + D
Sbjct: 14 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-------LKQGSMSPDAFLA 66
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQ 116
E ++M+ +QH ++++Y V+ ++ IY + EY + G L F K G KL +
Sbjct: 67 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 125
Query: 117 QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA 176
Q+ + F R HRDL+ N+L+ + K+ DFGL+ L + + P
Sbjct: 126 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPI 183
Query: 177 -YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+D+WS G++L ++ G +P+
Sbjct: 184 KWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 16 RLLGQGNFAKV----YYARHLGTGQSVXXXXXXXXXXLKVGLVDQT----KREISVMRLI 67
R LG+G+F KV Y + GTG+ V LK Q K+EI ++R +
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA------LKADCGPQHRSGWKQEIDILRTL 73
Query: 68 QHPNVMQIYEVMASKTK--IYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFC 125
H ++++ + + + VMEY G L + + + + QQ+ + +
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYL 133
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVIS 184
H++ HR+L N+LLD + ++K+ DFGL+ H+ + +P + APE +
Sbjct: 134 HAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 185 RRGYDGDKADIWSCGVILYVLLA 207
+ +D+WS GV LY LL
Sbjct: 194 EYKF-YYASDVWSFGVTLYELLT 215
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK---REISVMRLIQHPNVMQ 74
LG+GNF V R+ G + L+ DQ + REI +++ + H + +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL-HSDFIV 87
Query: 75 IYEVMA---SKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK--YFQQLISAIDFCHSRG 129
Y ++ + + VMEY G L + + + + D +R Y Q+ +++ SR
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ L ++ +P + APE +S +
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 189 DGDKADIWSCGVILYVLL 206
++D+WS GV+LY L
Sbjct: 208 S-RQSDVWSFGVVLYELF 224
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT-------LKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 79 YAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + + S
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K +H G P ++A E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXS-VHNKTGAKLPVKWMALESLQ 209
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 210 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 244
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 245 YAVV-SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 358
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPY 382
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 2 ETKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKR 59
E + +V + +L LG G F +V+ + G + LK G + D
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-------LKQGSMSPDAFLA 57
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQ 116
E ++M+ +QH ++++Y V+ ++ IY + EY + G L F K G KL +
Sbjct: 58 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 117 QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA 176
Q+ + F R HRDL+ N+L+ + K+ DFGL+ L + + P
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPI 174
Query: 177 -YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+D+WS G++L ++ G +P+
Sbjct: 175 KWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 24/254 (9%)
Query: 14 LGRLLGQGNFAKVY---YARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
L R+LG+G F +VY Y H G +V L ++ E +M+ + HP
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 69
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
+++++ ++ + + +ME GEL + + +K LK T Y Q+ A+ + S
Sbjct: 70 HIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 128
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISRRG 187
HRD+ N+L+ +K+ DFGLS + +D + P +++PE I+ R
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 188 YDGDKADIWSCGVILYVLLA-GYLPF---HDSNLMAMYRK---IAKADYKFPTWFSADVR 240
+ +D+W V ++ +L+ G PF + +++ + K + K D P ++
Sbjct: 187 F-TTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT---- 241
Query: 241 KLLSRILDPNPSTR 254
L++R D +PS R
Sbjct: 242 -LMTRCWDYDPSDR 254
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 2 ETKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKR 59
E + +V + +L LG G F +V+ + G + LK G + D
Sbjct: 13 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-------LKQGSMSPDAFLA 65
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQ 116
E ++M+ +QH ++++Y V+ ++ IY + EY + G L F K G KL +
Sbjct: 66 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 124
Query: 117 QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP- 175
Q+ + F R HRDL+ N+L+ + K+ DFGL+ L + + P
Sbjct: 125 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPI 182
Query: 176 AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+D+WS G++L ++ G +P+
Sbjct: 183 KWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPY 219
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT-------LKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 79 YAVV-SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY 216
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T++++S +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++EYA G L +V + +
Sbjct: 94 MKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++K+ DFGL+ + D
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNID 211
Query: 166 GLLHTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK---REISVMRLIQHPNVMQ 74
LG+GNF V R+ G + L+ DQ + REI +++ + H + +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL-HSDFIV 75
Query: 75 IYEVMA---SKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK--YFQQLISAIDFCHSRG 129
Y ++ + + VMEY G L + + + + D +R Y Q+ +++ SR
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ L ++ +P + APE +S +
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 189 DGDKADIWSCGVILYVLL 206
++D+WS GV+LY L
Sbjct: 196 S-RQSDVWSFGVVLYELF 212
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 24/254 (9%)
Query: 14 LGRLLGQGNFAKVY---YARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
L R+LG+G F +VY Y H G +V L ++ E +M+ + HP
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 85
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
+++++ ++ + + +ME GEL + + +K LK T Y Q+ A+ + S
Sbjct: 86 HIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 144
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISRRG 187
HRD+ N+L+ +K+ DFGLS + +D + P +++PE I+ R
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPIKWMSPESINFRR 202
Query: 188 YDGDKADIWSCGVILYVLLA-GYLPF---HDSNLMAMYRK---IAKADYKFPTWFSADVR 240
+ +D+W V ++ +L+ G PF + +++ + K + K D P ++
Sbjct: 203 FT-TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT---- 257
Query: 241 KLLSRILDPNPSTR 254
L++R D +PS R
Sbjct: 258 -LMTRCWDYDPSDR 270
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 2 ETKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKR 59
E + +V + +L LG G F +V+ + G + LK G + D
Sbjct: 10 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-------LKQGSMSPDAFLA 62
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQ 116
E ++M+ +QH ++++Y V+ ++ IY + EY + G L F K G KL +
Sbjct: 63 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 121
Query: 117 QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA 176
Q+ + F R HRDL+ N+L+ + K+ DFGL+ L + + P
Sbjct: 122 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPI 179
Query: 177 -YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+D+WS G++L ++ G +P+
Sbjct: 180 KWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPY 216
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 101/217 (46%), Gaps = 13/217 (5%)
Query: 1 METKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKRE 60
M+ ++ + +L + LG G F +V+ + + + ++ L E
Sbjct: 3 MDPAWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFL-----EE 57
Query: 61 ISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELF---KKVSKGKLKEDTARKYFQQ 117
++M+ +QH ++++Y V+ + IY + E+ G L K GK+ + Q
Sbjct: 58 ANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ 117
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA- 176
+ + + + HRDL+ N+L+ E+ M K+ DFGL+ + + + P
Sbjct: 118 IAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIK 175
Query: 177 YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+++WS G++LY ++ G +P+
Sbjct: 176 WTAPEAIN-FGCFTIKSNVWSFGILLYEIVTYGKIPY 211
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 2 ETKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKR 59
E + +V + +L LG G F +V+ + G + LK G + D
Sbjct: 11 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-------LKQGSMSPDAFLA 63
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQ 116
E ++M+ +QH ++++Y V+ ++ IY + EY + G L F K G KL +
Sbjct: 64 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 117 QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA 176
Q+ + F R HRDL+ N+L+ + K+ DFGL+ L + + P
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPI 180
Query: 177 -YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+D+WS G++L ++ G +P+
Sbjct: 181 KWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 24/254 (9%)
Query: 14 LGRLLGQGNFAKVY---YARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
L R+LG+G F +VY Y H G +V L ++ E +M+ + HP
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 73
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
+++++ ++ + + +ME GEL + + +K LK T Y Q+ A+ + S
Sbjct: 74 HIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 129 GVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISRRG 187
HRD+ N+L+ +K+ DFGLS + +D + P +++PE I+ R
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYI--EDEDYYKASVTRLPIKWMSPESINFRR 190
Query: 188 YDGDKADIWSCGVILYVLLA-GYLPF---HDSNLMAMYRK---IAKADYKFPTWFSADVR 240
+ +D+W V ++ +L+ G PF + +++ + K + K D P ++
Sbjct: 191 FT-TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYT---- 245
Query: 241 KLLSRILDPNPSTR 254
L++R D +PS R
Sbjct: 246 -LMTRCWDYDPSDR 258
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T++++S +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++EYA G L +V + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++++ DFGL+ + D
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA--RDINNID 211
Query: 166 GLLHTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 2 ETKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKR 59
E + +V + +L LG G F +V+ + G + LK G + D
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-------LKQGSMSPDAFLA 57
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQ 116
E ++M+ +QH ++++Y V+ ++ IY + EY + G L F K G KL +
Sbjct: 58 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 117 QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA 176
Q+ + F R HRDL+ N+L+ + K+ DFGL+ L + + P
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPI 174
Query: 177 -YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+D+WS G++L ++ G +P+
Sbjct: 175 KWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------VMRL 66
LG+ LG+G F +V A +G + +K+ D T++++S +M++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 89
Query: 67 I-QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-----------------KGKLKE 108
I +H N++ + +Y ++EYA G L + + + +L
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 109 DTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLL 168
Q+ +++ S+ HRDL N+L+ E+ ++K+ DFGL+ H D
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDYYK 207
Query: 169 HTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIA 225
TT G P ++APE + R Y ++D+WS GV+L+ + G P+ + ++ K+
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLL 265
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K ++ P+ + ++ ++ PS R + +++E+
Sbjct: 266 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T+ ++S +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEEDLSDLVSEMEM 93
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++EYA G L +V + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++K+ DFGL+ + D
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNID 211
Query: 166 GLLHTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------VMRL 66
LG+ LG+G F +V A +G + +K+ D T++++S +M++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 89
Query: 67 I-QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-----------------KGKLKE 108
I +H N++ + +Y ++EYA G L + + + +L
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 109 DTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLL 168
Q+ +++ S+ HRDL N+L+ E+ ++K+ DFGL+ H D
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDYYK 207
Query: 169 HTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIA 225
TT G P ++APE + R Y ++D+WS GV+L+ + G P+ + ++ K+
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLL 265
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K ++ P+ + ++ ++ PS R + +++E+
Sbjct: 266 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------VMRL 66
LG+ LG+G F +V A +G + +K+ D T++++S +M++
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 74
Query: 67 I-QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-----------------KGKLKE 108
I +H N++ + +Y ++EYA G L + + + +L
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 109 DTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLL 168
Q+ +++ S+ HRDL N+L+ E+ ++K+ DFGL+ H D
Sbjct: 135 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDYYK 192
Query: 169 HTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIA 225
TT G P ++APE + R Y ++D+WS GV+L+ + G P+ + ++ K+
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLL 250
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K ++ P+ + ++ ++ PS R + +++E+
Sbjct: 251 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------VMRL 66
LG+ LG+G F +V A +G + +K+ D T++++S +M++
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 81
Query: 67 I-QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-----------------KGKLKE 108
I +H N++ + +Y ++EYA G L + + + +L
Sbjct: 82 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 109 DTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLL 168
Q+ +++ S+ HRDL N+L+ E+ ++K+ DFGL+ H D
Sbjct: 142 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDYYK 199
Query: 169 HTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIA 225
TT G P ++APE + R Y ++D+WS GV+L+ + G P+ + ++ K+
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLL 257
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K ++ P+ + ++ ++ PS R + +++E+
Sbjct: 258 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 297
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------VMRL 66
LG+ LG+G F +V A +G + +K+ D T++++S +M++
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 78
Query: 67 I-QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-----------------KGKLKE 108
I +H N++ + +Y ++EYA G L + + + +L
Sbjct: 79 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 109 DTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLL 168
Q+ +++ S+ HRDL N+L+ E+ ++K+ DFGL+ H D
Sbjct: 139 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDYYK 196
Query: 169 HTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIA 225
TT G P ++APE + R Y ++D+WS GV+L+ + G P+ + ++ K+
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLL 254
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K ++ P+ + ++ ++ PS R + +++E+
Sbjct: 255 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 294
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------VMRL 66
LG+ LG+G F +V A +G + +K+ D T++++S +M++
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 82
Query: 67 I-QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-----------------KGKLKE 108
I +H N++ + +Y ++EYA G L + + + +L
Sbjct: 83 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 109 DTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLL 168
Q+ +++ S+ HRDL N+L+ E+ ++K+ DFGL+ H D
Sbjct: 143 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDYYK 200
Query: 169 HTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIA 225
TT G P ++APE + R Y ++D+WS GV+L+ + G P+ + ++ K+
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLL 258
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K ++ P+ + ++ ++ PS R + +++E+
Sbjct: 259 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 298
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 2 ETKGKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKR 59
E + +V + +L LG G F +V+ + G + LK G + D
Sbjct: 15 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-------LKQGSMSPDAFLA 67
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQ 116
E ++M+ +QH ++++Y V+ ++ IY + EY + G L F K G KL +
Sbjct: 68 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 126
Query: 117 QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP- 175
Q+ + F R HRDL+ N+L+ + K+ DFGL+ L +D G
Sbjct: 127 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI----EDNEYTAREGAKF 182
Query: 176 --AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+D+WS G++L ++ G +P+
Sbjct: 183 PIKWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPY 221
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------VMRL 66
LG+ LG+G F +V A +G + +K+ D T++++S +M++
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 130
Query: 67 I-QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-----------------KGKLKE 108
I +H N++ + +Y ++EYA G L + + + +L
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 109 DTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLL 168
Q+ +++ S+ HRDL N+L+ E+ ++K+ DFGL+ H D
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDYYK 248
Query: 169 HTTCG-TPA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIA 225
TT G P ++APE + R Y ++D+WS GV+L+ + G P+ + ++ K+
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLL 306
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K ++ P+ + ++ ++ PS R + +++E+
Sbjct: 307 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 30/268 (11%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM-RLIQHPNVMQI 75
++G+GNF +V AR G + E+ V+ +L HPN++ +
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 76 YEVMASKTKIYFVMEYAKGGELFKKVSKGKLKE---------DTARKYF-QQLI------ 119
+ +Y +EYA G L + K ++ E TA QQL+
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 120 -SAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT-PA- 176
+D+ + HR+L N+L+ EN + K+ DFGLS + Q+ + T G P
Sbjct: 149 ARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS-----RGQEVYVKKTMGRLPVR 203
Query: 177 YVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKFPTWF 235
++A E ++ Y + +D+WS GV+L+ +++ G P+ +Y K+ + Y+
Sbjct: 204 WMAIESLNYSVYTTN-SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPL 261
Query: 236 SAD--VRKLLSRILDPNPSTRISIAKIM 261
+ D V L+ + P R S A+I+
Sbjct: 262 NCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------VMRL 66
LG+ LG+G F +V A +G + +K+ D T++++S +M++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKD--KPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 89
Query: 67 I-QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVS-----------------KGKLKE 108
I +H N++ + +Y ++EYA G L + + + +L
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 109 DTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLL 168
Q+ +++ S+ HRDL N+L+ E+ ++K+ DFGL+ H D
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA--RDIHHIDYYK 207
Query: 169 HTTCG-TPA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIA 225
TT G P ++APE + R Y ++D+WS GV+L+ + G P+ + ++ K+
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLL 265
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K ++ P+ + ++ ++ PS R + +++E+
Sbjct: 266 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTA 111
+D RE++ M + H N++++Y V+ + + V E A G L ++ K G T
Sbjct: 65 MDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTL 123
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
+Y Q+ + + S+ HRDL NLLL ++K+ DFGL ++
Sbjct: 124 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 183
Query: 172 CGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADY 229
P A+ APE + R + +D W GV L+ + G P+ N + KI K
Sbjct: 184 RKVPFAWCAPESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 242
Query: 230 KFP 232
+ P
Sbjct: 243 RLP 245
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 16/228 (7%)
Query: 16 RLLGQGNFAKVYYARHLGTGQS-VXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQ 74
R++G+G+F VY+ ++ Q+ + ++ V+ RE +MR + HPNV+
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 75 IYEVMASKTKI-YFVMEYAKGGELFKKVSKGKLKEDTARKYFQ---QLISAIDFCHSRGV 130
+ +M + + ++ Y G+L + + + + T + Q+ +++ +
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQKF 145
Query: 131 YHRDLKPENLLLDENGMLKVTDFGLSA-LAKCKHQDGLLHTTCGTPA-YVAPEVISRRGY 188
HRDL N +LDE+ +KV DFGL+ + ++ H P + A E + +
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRF 205
Query: 189 DGDKADIWSCGVILYVLLA-------GYLPFHDSNLMAMYRKIAKADY 229
K+D+WS GV+L+ LL PF ++ +A R++ + +Y
Sbjct: 206 T-TKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEY 252
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 75
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + K K + D + +Y Q+ +++ ++
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 135
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HR+L N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF 195
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 196 SV-ASDVWSFGVVLYELFT 213
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + + S
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 170
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K +H G P ++A E +
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVKWMALESLQ 229
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 230 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 261
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT-------LKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 79 YAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY 216
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT-------LKPGTMSPEAFLQEAQVMKKLRHEKLVQL 78
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 79 YAVV-SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL+ L +D G + APE + G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY 216
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-------VAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL 245
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ IY V EY G L F K GK L+ Q+ S + + H
Sbjct: 246 YAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRRGYD 189
RDL+ N+L+ EN + KV DFGL L +D G + APE + G
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLI----EDNEYTARQGAKFPIKWTAPEA-ALYGRF 359
Query: 190 GDKADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 360 TIKSDVWSFGILLTELTTKGRVPY 383
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + + S
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 149
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K +H G P ++A E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVKWMALESLQ 208
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 209 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + + S
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 169
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K +H G P ++A E +
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVKWMALESLQ 228
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 229 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 260
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + + S
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 148
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K +H G P ++A E +
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVKWMALESLQ 207
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 208 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 239
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + + S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K +H G P ++A E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVKWMALESLQ 210
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 211 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + + S
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 143
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K +H G P ++A E +
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVKWMALESLQ 202
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 203 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 234
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTA 111
+D RE++ M + H N++++Y V+ + + V E A G L ++ K G T
Sbjct: 55 MDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
+Y Q+ + + S+ HRDL NLLL ++K+ DFGL ++
Sbjct: 114 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 173
Query: 172 CGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADY 229
P A+ APE + R + +D W GV L+ + G P+ N + KI K
Sbjct: 174 RKVPFAWCAPESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 232
Query: 230 KFP 232
+ P
Sbjct: 233 RLP 235
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + + S
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K +H G P ++A E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVKWMALESLQ 209
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 210 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + + S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K +H G P ++A E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVKWMALESLQ 210
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 211 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 12/213 (5%)
Query: 13 ELGRLLGQGNFAKVYYARHLGT-GQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
++G+G+F VY+ L G+ + +G V Q E +M+ HPN
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 72 VMQIYEV-MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARK---YFQQLISAIDFCHS 127
V+ + + + S+ V+ Y K G+L + + + T + + Q+ + + S
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 146
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT--PA-YVAPEVIS 184
+ HRDL N +LDE +KV DFGL+ K +H G P ++A E +
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-VHNKTGAKLPVKWMALESLQ 205
Query: 185 RRGYDGDKADIWSCGVILYVLLA-GYLPFHDSN 216
+ + K+D+WS GV+L+ L+ G P+ D N
Sbjct: 206 TQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVN 237
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKREISVMRLIQHPNVMQI 75
LG G F +V+ + G + LK G + D E ++M+ +QH ++++
Sbjct: 16 LGAGQFGEVWMGYYNGHTK-------VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL 68
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ ++ IY + EY + G L F K G KL + Q+ + F R H
Sbjct: 69 YAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 127
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISRRGYDGD 191
RDL+ N+L+ + K+ DFGL+ L + + P + APE I+ G
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAIN-YGTFTI 184
Query: 192 KADIWSCGVILY-VLLAGYLPF 212
K+D+WS G++L ++ G +P+
Sbjct: 185 KSDVWSFGILLTEIVTHGRIPY 206
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 19/170 (11%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV--SKGKLKEDTARK 113
+ +RE+ +M + HPN++++Y +M + ++ VME+ G+L+ ++ +K +
Sbjct: 69 EFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLR 126
Query: 114 YFQQLISAIDFCHSRG--VYHRDLKPENLL---LDENGML--KVTDFGLSALAKCKHQDG 166
+ I++ ++ + HRDL+ N+ LDEN + KV DFG S G
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-QSVHSVSG 185
Query: 167 LLHTTCGTPAYVAPEVIS--RRGYDGDKADIWSCGVILYVLLAGYLPFHD 214
LL G ++APE I Y +KAD +S +ILY +L G PF +
Sbjct: 186 LL----GNFQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDE 230
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 18/229 (7%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK----REISVMRLIQHPN 71
+++G G F +VY + + S LK G ++ + E +M H N
Sbjct: 50 KVIGAGEFGEVY--KGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
++++ V++ + + EY + G L F + G+ + + + + + +
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA---YVAPEVISRR 186
HRDL N+L++ N + KV+DFGLS + + + +TT G + APE IS R
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE--ATYTTSGGKIPIRWTAPEAISYR 225
Query: 187 GYDGDKADIWSCGVILY-VLLAGYLPFHD-SNLMAMYRKIAKADYKFPT 233
+ +D+WS G++++ V+ G P+ + SN M K ++ PT
Sbjct: 226 KFT-SASDVWSFGIVMWEVMTYGERPYWELSNHEVM--KAINDGFRLPT 271
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQ 116
E ++M+ +QH ++++Y V+ ++ IY + EY + G L F K G KL +
Sbjct: 58 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 117 QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSAL---AKCKHQDGLLHTTCG 173
Q+ + F R HRDL+ N+L+ + K+ DFGL+ L A+ ++G
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-- 174
Query: 174 TPAYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
+ APE I+ G K+D+WS G++L ++ G +P+
Sbjct: 175 --KWTAPEAIN-YGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 19/170 (11%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV--SKGKLKEDTARK 113
+ +RE+ +M + HPN++++Y +M + ++ VME+ G+L+ ++ +K +
Sbjct: 69 EFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLR 126
Query: 114 YFQQLISAIDFCHSRG--VYHRDLKPENLL---LDENGML--KVTDFGLSALAKCKHQDG 166
+ I++ ++ + HRDL+ N+ LDEN + KV DF LS G
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-QSVHSVSG 185
Query: 167 LLHTTCGTPAYVAPEVIS--RRGYDGDKADIWSCGVILYVLLAGYLPFHD 214
LL G ++APE I Y +KAD +S +ILY +L G PF +
Sbjct: 186 LL----GNFQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDE 230
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTA 111
+D RE++ M + H N++++Y V+ + + V E A G L ++ K G T
Sbjct: 59 MDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTL 117
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
+Y Q+ + + S+ HRDL NLLL ++K+ DFGL ++
Sbjct: 118 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 172 CGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADY 229
P A+ APE + R + +D W GV L+ + G P+ N + KI K
Sbjct: 178 RKVPFAWCAPESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 236
Query: 230 KFP 232
+ P
Sbjct: 237 RLP 239
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 40/233 (17%)
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELF--KKVSKGKLK---EDTARKYFQQLISA 121
HPNV++ Y + +Y +E +L K VS LK E +Q+ S
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 122 IDFCHSRGVYHRDLKPENLLLD-------------ENGMLKVTDFGLSALAKCKHQDG-- 166
+ HS + HRDLKP+N+L+ EN + ++DFGL CK D
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-----CKKLDSGQ 200
Query: 167 -----LLHTTCGTPAYVAPEVI--SRRGYDGDKADIWSCGVILYVLLA-GYLPFHD---- 214
L+ GT + APE++ S + DI+S G + Y +L+ G PF D
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 260
Query: 215 -SNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
SN++ + + A+ L+S+++D +P R + K++ +P F
Sbjct: 261 ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 40/233 (17%)
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELF--KKVSKGKLK---EDTARKYFQQLISA 121
HPNV++ Y + +Y +E +L K VS LK E +Q+ S
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 122 IDFCHSRGVYHRDLKPENLLLD-------------ENGMLKVTDFGLSALAKCKHQDG-- 166
+ HS + HRDLKP+N+L+ EN + ++DFGL CK D
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-----CKKLDSGQ 200
Query: 167 -----LLHTTCGTPAYVAPEVI--SRRGYDGDKADIWSCGVILYVLLA-GYLPFHD---- 214
L+ GT + APE++ S + DI+S G + Y +L+ G PF D
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 260
Query: 215 -SNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
SN++ + + A+ L+S+++D +P R + K++ +P F
Sbjct: 261 ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 18 LGQGNFAKVYYARHL----GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
LG+GNF V R+ TG+ V + +REI +++ +QH N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---RDFEREIEILKSLQHDNIV 77
Query: 74 QIYEVM--ASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCHSRG 129
+ V A + + +MEY G L + + ++ +Y Q+ +++ ++
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY-VAPEVISRRGY 188
HRDL N+L++ +K+ DFGL+ + + + +P + APE ++ +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 189 DGDKADIWSCGVILYVLLA 207
+D+WS GV+LY L
Sbjct: 198 SV-ASDVWSFGVVLYELFT 215
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTA 111
+D RE++ M + H N++++Y V+ + + V E A G L ++ K G T
Sbjct: 65 MDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTL 123
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
+Y Q+ + + S+ HRDL NLLL ++K+ DFGL ++
Sbjct: 124 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 183
Query: 172 CGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADY 229
P A+ APE + R + +D W GV L+ + G P+ N + KI K
Sbjct: 184 RKVPFAWCAPESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 242
Query: 230 KFP 232
+ P
Sbjct: 243 RLP 245
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T++++S +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++ YA G L +V + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++K+ DFGL+ + D
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNID 211
Query: 166 GLLHTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTA 111
+D RE++ M + H N++++Y V+ + + V E A G L ++ K G T
Sbjct: 55 MDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
+Y Q+ + + S+ HRDL NLLL ++K+ DFGL ++
Sbjct: 114 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 172 CGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADY 229
P A+ APE + R + +D W GV L+ + G P+ N + KI K
Sbjct: 174 RKVPFAWCAPESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 232
Query: 230 KFP 232
+ P
Sbjct: 233 RLP 235
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTA 111
+D RE++ M + H N++++Y V+ + + V E A G L ++ K G T
Sbjct: 59 MDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTL 117
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
+Y Q+ + + S+ HRDL NLLL ++K+ DFGL ++
Sbjct: 118 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 172 CGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADY 229
P A+ APE + R + +D W GV L+ + G P+ N + KI K
Sbjct: 178 RKVPFAWCAPESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 236
Query: 230 KFP 232
+ P
Sbjct: 237 RLP 239
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 54 VDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK--GKLKEDTA 111
+D RE++ M + H N++++Y V+ + + V E A G L ++ K G T
Sbjct: 55 MDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTL 113
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
+Y Q+ + + S+ HRDL NLLL ++K+ DFGL ++
Sbjct: 114 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 172 CGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADY 229
P A+ APE + R + +D W GV L+ + G P+ N + KI K
Sbjct: 174 RKVPFAWCAPESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE 232
Query: 230 KFP 232
+ P
Sbjct: 233 RLP 235
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLIQHPNVMQI 75
LGQG F +V+ GT + LK G + +E VM+ ++H ++Q+
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL 68
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ S+ I V EY G L F K GK L+ Q+ S + + H
Sbjct: 69 YAVV-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 127
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP-AYVAPEVISRRGYDGD 191
RDL+ N+L+ EN + KV DFGL+ L + + P + APE + G
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEA-ALYGRFTI 184
Query: 192 KADIWSCGVILYVLLA-GYLPF 212
K+D+WS G++L L G +P+
Sbjct: 185 KSDVWSFGILLTELTTKGRVPY 206
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Query: 55 DQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKV-SKGK-LKEDTAR 112
D+ +E M + HP +++ Y V + + IY V EY G L + S GK L+
Sbjct: 48 DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL 107
Query: 113 KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
+ + + F S HRDL N L+D + +KV+DFG++ D ++
Sbjct: 108 EMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV----LDDQYVSSV 163
Query: 173 GTP---AYVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPF 212
GT + APEV Y K+D+W+ G++++ V G +P+
Sbjct: 164 GTKFPVKWSAPEVFHYFKY-SSKSDVWAFGILMWEVFSLGKMPY 206
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 100/251 (39%), Gaps = 41/251 (16%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYA-RHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISV 63
G VL +YE+ LG+G F KV H G+ V + + EI V
Sbjct: 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY----CEAARSEIQV 64
Query: 64 MRLIQ--HPN----VMQIYEVMASKTKIYFVMEYA--KGGELFKKVSKGKLKEDTARKYF 115
+ + PN +Q+ E I V E + K+ + D RK
Sbjct: 65 LEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 116 QQLISAIDFCHSRGVYHRDLKPENLLL---------------DE----NGMLKVTDFGLS 156
Q+ +++F HS + H DLKPEN+L DE N +KV DFG S
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG-S 183
Query: 157 ALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGY--LPFHD 214
A +H L+ Y APEVI G+ D+WS G IL G+ P HD
Sbjct: 184 ATYDDEHHSTLVXXR----HYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVFPTHD 238
Query: 215 S-NLMAMYRKI 224
S +AM +I
Sbjct: 239 SKEHLAMMERI 249
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKK-----IKREIKILENLRGGPN 93
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 94 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 150
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+L+D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 151 GIMHRDVKPHNVLIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 208 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREIS-------V 63
K LG+ LG+G F +V A +G + +K+ D T++++S +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEM 93
Query: 64 MRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGEL-----------------FKKVSKGK 105
M++I +H N++ + +Y ++ YA G L +V + +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ QL +++ S+ HRDL N+L+ EN ++K+ DFGL+ + D
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA--RDINNID 211
Query: 166 GLLHTTCGT-PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYR 222
TT G P ++APE + R Y ++D+WS GV+++ + G P+ + ++
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF- 269
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K+ K ++ P + ++ ++ PS R + +++E+
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 44/237 (18%)
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELF--KKVSKGKLK---EDTARKYFQQLISA 121
HPNV++ Y + +Y +E +L K VS LK E +Q+ S
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 122 IDFCHSRGVYHRDLKPENLLLD-------------ENGMLKVTDFGLSALAKCKHQDG-- 166
+ HS + HRDLKP+N+L+ EN + ++DFGL CK D
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-----CKKLDSGQ 182
Query: 167 -----LLHTTCGTPAYVAPEVISRRGYDGDK------ADIWSCGVILYVLLA-GYLPFHD 214
L+ GT + APE++ K DI+S G + Y +L+ G PF D
Sbjct: 183 XXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 215 -----SNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
SN++ + + A+ L+S+++D +P R + K++ +P F
Sbjct: 243 KYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 44/237 (18%)
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGG--ELF--KKVSKGKLK---EDTARKYFQQLISA 121
HPNV++ Y + +Y +E +L K VS LK E +Q+ S
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 122 IDFCHSRGVYHRDLKPENLLLD-------------ENGMLKVTDFGLSALAKCKHQDG-- 166
+ HS + HRDLKP+N+L+ EN + ++DFGL CK D
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-----CKKLDSGQ 182
Query: 167 -----LLHTTCGTPAYVAPEVISRRGYDGDK------ADIWSCGVILYVLLA-GYLPFHD 214
L+ GT + APE++ K DI+S G + Y +L+ G PF D
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 215 -----SNLMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKIMENPWF 266
SN++ + + A+ L+S+++D +P R + K++ +P F
Sbjct: 243 KYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 22/224 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
YE+ R +G+G +++V+ ++ + K + + L+ PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLMGGPN 87
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++++ +++ SKT + EY + KV L + R Y +L+ A+D+CHS+
Sbjct: 88 IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQ 144
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E L++ D+G LA+ H + + + PE ++ +
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDSNLMAMYRKIAKA 227
YD D+WS G + ++ PF HD++ + KIAK
Sbjct: 202 DYDY-SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV--KIAKV 242
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV--DQTKREISVMRLIQHPNVMQI 75
LG G F +V+ + G + LK G + D E ++M+ +QH ++++
Sbjct: 17 LGAGQFGEVWMGYYNGHTK-------VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL 69
Query: 76 YEVMASKTKIYFVMEYAKGGEL--FKKVSKG-KLKEDTARKYFQQLISAIDFCHSRGVYH 132
Y V+ ++ IY + EY + G L F K G KL + Q+ + F R H
Sbjct: 70 YAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 128
Query: 133 RDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA-YVAPEVISRRGYDGD 191
R+L+ N+L+ + K+ DFGL+ L + + P + APE I+ G
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAIN-YGTFTI 185
Query: 192 KADIWSCGVILY-VLLAGYLPF 212
K+D+WS G++L ++ G +P+
Sbjct: 186 KSDVWSFGILLTEIVTHGRIPY 207
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 125/276 (45%), Gaps = 26/276 (9%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKM-LKEGATHSEHRALMSELKILIH 86
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGEL-------------FKKVSKGKLKEDTA 111
+ + + ++ + TK + ++E+ K G L +K + K L +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGL-ARDIYKDPDYVRKGD 205
Query: 172 CGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADY 229
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + + K
Sbjct: 206 ARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGT 264
Query: 230 KF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
+ P + + ++ + + PS R + ++++E+
Sbjct: 265 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 70 PNVMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
PN++++ +++ SKT + EY + KV L + R Y +L+ A+D+CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 127 SRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VIS 184
S+G+ HRD+KP N+++D E L++ D+G LA+ H + + + PE ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELLVD 199
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPF---HDSNLMAMYRKIAKA 227
+ YD D+WS G + ++ PF HD++ + KIAK
Sbjct: 200 LQDYDY-SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV--KIAKV 242
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 70 PNVMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
PN++++ +++ SKT + EY + KV L + R Y +L+ A+D+CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 127 SRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VIS 184
S+G+ HRD+KP N+++D E L++ D+G LA+ H + + + PE ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELLVD 199
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPF---HDSNLMAMYRKIAKA 227
+ YD D+WS G + ++ PF HD++ + KIAK
Sbjct: 200 LQDYDY-SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV--KIAKV 242
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 22/224 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
YE+ R +G+G +++V+ ++ + K + + L PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLCGGPN 87
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++++ +++ SKT + EY + KV L + R Y +L+ A+D+CHS+
Sbjct: 88 IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQ 144
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E L++ D+G LA+ H + + + PE ++ +
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDSNLMAMYRKIAKA 227
YD D+WS G + ++ PF HD++ + KIAK
Sbjct: 202 DYDY-SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV--KIAKV 242
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 70 PNVMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
PN++++ +++ SKT + EY + KV L + R Y +L+ A+D+CH
Sbjct: 87 PNIVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCH 143
Query: 127 SRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VIS 184
S+G+ HRD+KP N+++D E L++ D+G LA+ H + + + PE ++
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELLVD 200
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPF---HDSNLMAMYRKIAKA 227
+ YD D+WS G + ++ PF HD++ + KIAK
Sbjct: 201 LQDYDY-SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV--KIAKV 243
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 70 PNVMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
PN++++ +++ SKT + EY + KV L + R Y +L+ A+D+CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 127 SRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VIS 184
S+G+ HRD+KP N+++D E L++ D+G LA+ H + + + PE ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELLVD 199
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPF---HDSNLMAMYRKIAKA 227
+ YD D+WS G + ++ PF HD++ + KIAK
Sbjct: 200 LQDYDY-SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV--KIAKV 242
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 22/224 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
YE+ R +G+G +++V+ ++ + K + + L PN
Sbjct: 35 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLCGGPN 89
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++++ +++ SKT + EY + KV L + R Y +L+ A+D+CHS+
Sbjct: 90 IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQ 146
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E L++ D+G LA+ H + + + PE ++ +
Sbjct: 147 GIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELLVDLQ 203
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDSNLMAMYRKIAKA 227
YD D+WS G + ++ PF HD++ + KIAK
Sbjct: 204 DYDY-SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV--KIAKV 244
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 22/224 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
YE+ R +G+G +++V+ ++ + K + + L PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLCGGPN 87
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++++ +++ SKT + EY + KV L + R Y +L+ A+D+CHS+
Sbjct: 88 IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQ 144
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E L++ D+G LA+ H + + + PE ++ +
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDSNLMAMYRKIAKA 227
YD D+WS G + ++ PF HD++ + KIAK
Sbjct: 202 DYDY-SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV--KIAKV 242
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 22/224 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
YE+ R +G+G +++V+ ++ + K + + L PN
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLCGGPN 88
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++++ +++ SKT + EY + KV L + R Y +L+ A+D+CHS+
Sbjct: 89 IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQ 145
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E L++ D+G LA+ H + + + PE ++ +
Sbjct: 146 GIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDSNLMAMYRKIAKA 227
YD D+WS G + ++ PF HD++ + KIAK
Sbjct: 203 DYDY-SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV--KIAKV 243
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 59 REISVMRLI-QHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF-- 115
RE+ ++R +HPNV++ + + Y +E + L+E +K F
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE----------LCAATLQEYVEQKDFAH 115
Query: 116 ---------QQLISAIDFCHSRGVYHRDLKPENLLL---DENGMLK--VTDFGLS-ALAK 160
QQ S + HS + HRDLKP N+L+ + +G +K ++DFGL LA
Sbjct: 116 LGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175
Query: 161 CKHQDGLLHTTCGTPAYVAPEVISRRGYDGD--KADIWSCGVILYVLLA-GYLPFHDS-- 215
+H GT ++APE++S + DI+S G + Y +++ G PF S
Sbjct: 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ 235
Query: 216 NLMAMYRKIAKADYKFPTWFSADV-RKLLSRILDPNPSTRISIAKIMENPWF 266
+ D P + R+L+ +++ +P R S ++++P+F
Sbjct: 236 RQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 70 PNVMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
PN++++ +++ SKT + EY + KV L + R Y +L+ A+D+CH
Sbjct: 107 PNIVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCH 163
Query: 127 SRGVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VIS 184
S+G+ HRD+KP N+++D E L++ D+G LA+ H + + + PE ++
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWG---LAEFYHPGKEYNVRVASRYFKGPELLVD 220
Query: 185 RRGYDGDKADIWSCGVILYVLLAGYLPF---HDSNLMAMYRKIAKA 227
+ YD D+WS G + ++ PF HD++ + KIAK
Sbjct: 221 LQDYDY-SLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV--KIAKV 263
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 19/231 (8%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISVMRLI 67
+ +L + LG G F +V+ G + LK G + E +M+ +
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKT-------LKPGTMSPESFLEEAQIMKKL 61
Query: 68 QHPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGK-LKEDTARKYFQQLISAIDF 124
+H ++Q+Y V+ S+ IY V EY G L F K +G+ LK Q+ + + +
Sbjct: 62 KHDKLVQLYAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY 120
Query: 125 CHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP-AYVAPEVI 183
HRDL+ N+L+ + K+ DFGL+ L + + P + APE
Sbjct: 121 IERMNYIHRDLRSANILVGNGLICKIADFGLARL--IEDNEXTARQGAKFPIKWTAPEA- 177
Query: 184 SRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKFPT 233
+ G K+D+WS G++L L+ G +P+ N + ++ + Y+ P
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-YRMPC 227
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 47/296 (15%)
Query: 6 KVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMR 65
+ + ++ ++ + +G+G + +V+ + G +V + +T EI
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE----EASWFRET--EIYQTV 86
Query: 66 LIQHPNVMQIYEV----MASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISA 121
L++H N++ S T++Y + +Y + G L+ + L + K +S
Sbjct: 87 LMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSG 146
Query: 122 IDFCHSR--------GVYHRDLKPENLLLDENGMLKVTDFGLSA--LAKCKHQDGLLHTT 171
+ H+ + HRDLK +N+L+ +NG + D GL+ ++ D +T
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR 206
Query: 172 CGTPAYVAPEV----ISRRGYDG-DKADIWSCGVILY----------VLLAGYLPFHD-- 214
GT Y+ PEV ++R + AD++S G+IL+ ++ LP+HD
Sbjct: 207 VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV 266
Query: 215 -----SNLMAMYRKIAKADYKFPTWFSAD-----VRKLLSRILDPNPSTRISIAKI 260
M I K FP +S+D + KL++ NP++R++ ++
Sbjct: 267 PSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 113/267 (42%), Gaps = 21/267 (7%)
Query: 13 ELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI----Q 68
+ G+ LG G F KV A G G+ D+ + +S ++++ Q
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELF---KKVSKGKLKEDTAR--------KYFQQ 117
H N++ + + + EY G+L ++ ++ L ++ R + Q
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA- 176
+ + F S+ HRD+ N+LL + K+ DFGL A + ++ P
Sbjct: 161 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL-ARDIMNDSNYIVKGNARLPVK 219
Query: 177 YVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKF--PT 233
++APE I Y ++D+WS G++L+ + + G P+ + + + K+ K Y+ P
Sbjct: 220 WMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 278
Query: 234 WFSADVRKLLSRILDPNPSTRISIAKI 260
+ ++ ++ P+ R + +I
Sbjct: 279 FAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 113/267 (42%), Gaps = 21/267 (7%)
Query: 13 ELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI----Q 68
+ G+ LG G F KV A G G+ D+ + +S ++++ Q
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELF---KKVSKGKLKEDTAR--------KYFQQ 117
H N++ + + + EY G+L ++ ++ L ++ R + Q
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPA- 176
+ + F S+ HRD+ N+LL + K+ DFGL A + ++ P
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL-ARDIMNDSNYIVKGNARLPVK 227
Query: 177 YVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKF--PT 233
++APE I Y ++D+WS G++L+ + + G P+ + + + K+ K Y+ P
Sbjct: 228 WMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA 286
Query: 234 WFSADVRKLLSRILDPNPSTRISIAKI 260
+ ++ ++ P+ R + +I
Sbjct: 287 FAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 125/276 (45%), Gaps = 26/276 (9%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKM-LKEGATHSEHRALMSELKILIH 86
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGEL-------------FKKVSKGKLKEDTA 111
+ + + ++ + TK + ++E+ K G L +K + K L +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPDYVRKGD 205
Query: 172 CGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADY 229
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + + K
Sbjct: 206 ARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 264
Query: 230 KF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
+ P + + ++ + + PS R + ++++E+
Sbjct: 265 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 93
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 94 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQL-RQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 208 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 17/229 (7%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
+ +L + LG G F +V+ A + + ++ L E +VM+ +QH
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLA-----EANVMKTLQH 69
Query: 70 PNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTAR--KYFQQLISAIDFC 125
+++++ V+ +K IY + E+ G L F K +G K+ + + Q+ + F
Sbjct: 70 DKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFI 127
Query: 126 HSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP-AYVAPEVIS 184
R HRDL+ N+L+ + + K+ DFGL+ + + + P + APE I+
Sbjct: 128 EQRNYIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAIN 185
Query: 185 RRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFP 232
G K+D+WS G++L ++ G +P+ + + R + + Y+ P
Sbjct: 186 -FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMP 232
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 93
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 94 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 150
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 208 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 92
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 93 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 149
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 207 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 237
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 93
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 94 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 150
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 208 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 93
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 94 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 150
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 208 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 93
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 94 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 150
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 208 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 93
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 94 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 150
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE++
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 188 YDGDKADIWSCGVILYVLLAGYLPF---HDS 215
D+WS G +L ++ PF HD+
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 93
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 94 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 150
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 208 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 93
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 94 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 150
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 208 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 93
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 94 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 150
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 208 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 238
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 91
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 92 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 148
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 149 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 205
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 206 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 236
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 33/273 (12%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM 64
G+ M +YE+ L+G+G+F +V A + V K ++Q + E+ ++
Sbjct: 30 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEVRLL 85
Query: 65 RLI-QHPNVMQIYEVMASKTKIY-------FVMEYAKGGELFKKVSKGKLKEDTARKYFQ 116
L+ +H M+ Y V + ++ F M +L + + + + RK+ Q
Sbjct: 86 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQ 145
Query: 117 QLISAIDFCHSR--GVYHRDLKPENLLL--DENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q+ +A+ F + + H DLKPEN+LL + +K+ DFG S + ++
Sbjct: 146 QMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR-----IYQXI 200
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFP 232
+ Y +PEV+ YD D+WS G IL + G F +N + KI + P
Sbjct: 201 QSRFYRSPEVLLGMPYDL-AIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 259
Query: 233 TWFSADVRKLLSRILDPNPSTRISIAKIMENPW 265
+ ILD P R K+ + W
Sbjct: 260 -----------AHILDQAPKARKFFEKLPDGTW 281
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 92
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 93 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 149
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 207 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 237
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 33/273 (12%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM 64
G+ M +YE+ L+G+G+F +V A + V K ++Q + E+ ++
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEVRLL 104
Query: 65 RLI-QHPNVMQIYEVMASKTKIY-------FVMEYAKGGELFKKVSKGKLKEDTARKYFQ 116
L+ +H M+ Y V + ++ F M +L + + + + RK+ Q
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 117 QLISAIDFCHSR--GVYHRDLKPENLLL--DENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q+ +A+ F + + H DLKPEN+LL + +K+ DFG S + ++
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR-----IYQXI 219
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFP 232
+ Y +PEV+ YD D+WS G IL + G F +N + KI + P
Sbjct: 220 QSRFYRSPEVLLGMPYDL-AIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278
Query: 233 TWFSADVRKLLSRILDPNPSTRISIAKIMENPW 265
+ ILD P R K+ + W
Sbjct: 279 -----------AHILDQAPKARKFFEKLPDGTW 300
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 12 YELGRLLGQG--NFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
YEL ++G+G + V AR+ TG+ V +V + E+ V +L H
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-CSNEMVTFLQGELHVSKLFNH 85
Query: 70 PNVMQIYEVMASKTKIYFV---MEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
PN++ + +++ V M Y +L + E Q ++ A+D+ H
Sbjct: 86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDF--GLSALAKCKHQDGLLHT----TCGTPAYVAP 180
G HR +K ++L+ +G + ++ LS ++ + Q ++H + +++P
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR-VVHDFPKYSVKVLPWLSP 204
Query: 181 EVISR--RGYDGDKADIWSCGVILYVLLAGYLPFHD 214
EV+ + +GYD K+DI+S G+ L G++PF D
Sbjct: 205 EVLQQNLQGYDA-KSDIYSVGITACELANGHVPFKD 239
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 20/212 (9%)
Query: 12 YELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
Y+L R LG+G +++V+ A ++ + V K + + L PN
Sbjct: 44 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK-----IKREIKILENLRGGPN 98
Query: 72 VMQIYEVM---ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSR 128
++ + +++ S+T V E+ + FK++ + L + R Y +++ A+D+CHS
Sbjct: 99 IITLADIVKDPVSRTPA-LVFEHVNNTD-FKQLYQ-TLTDYDIRFYMYEILKALDYCHSM 155
Query: 129 GVYHRDLKPENLLLD-ENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE-VISRR 186
G+ HRD+KP N+++D E+ L++ D+G LA+ H + + + PE ++ +
Sbjct: 156 GIMHRDVKPHNVMIDHEHRKLRLIDWG---LAEFYHPGQEYNVRVASRYFKGPELLVDYQ 212
Query: 187 GYDGDKADIWSCGVILYVLLAGYLPF---HDS 215
YD D+WS G +L ++ PF HD+
Sbjct: 213 MYDY-SLDMWSLGCMLASMIFRKEPFFHGHDN 243
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 12 YELGRLLGQG--NFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
YEL ++G+G + V AR+ TG+ V +V + E+ V +L H
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-CSNEMVTFLQGELHVSKLFNH 69
Query: 70 PNVMQIYEVMASKTKIYFV---MEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCH 126
PN++ + +++ V M Y +L + E Q ++ A+D+ H
Sbjct: 70 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 129
Query: 127 SRGVYHRDLKPENLLLDENGMLKVTDF--GLSALAKCKHQDGLLHT----TCGTPAYVAP 180
G HR +K ++L+ +G + ++ LS ++ + Q ++H + +++P
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR-VVHDFPKYSVKVLPWLSP 188
Query: 181 EVISR--RGYDGDKADIWSCGVILYVLLAGYLPFHD 214
EV+ + +GYD K+DI+S G+ L G++PF D
Sbjct: 189 EVLQQNLQGYDA-KSDIYSVGITACELANGHVPFKD 223
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
+LG+G F KVY R L G V L QT E+ ++ + H N++++
Sbjct: 45 ILGRGGFGKVYKGR-LADGTLVAVKRLKEERXQGGELQFQT--EVEMISMAVHRNLLRLR 101
Query: 77 EVMASKTKIYFVMEYAKGGEL---FKKVSKGKLKEDTARKYFQQLISAI------DFCHS 127
+ T+ V Y G + ++ + + D ++ L SA D C
Sbjct: 102 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP 161
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ + HRD+K N+LLDE V DFGL+ L K + GT ++APE +S G
Sbjct: 162 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVRGTIGHIAPEYLS-TG 218
Query: 188 YDGDKADIWSCGVILYVLLAGYLPF 212
+K D++ GV+L L+ G F
Sbjct: 219 KSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 105/227 (46%), Gaps = 21/227 (9%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
L + LG G F +V+ A + + ++ L E +VM+ +QH ++
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLA-----EANVMKTLQHDKLV 246
Query: 74 QIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+++ V+ +K IY + E+ G L F K +G K+ + + Q+ + F R
Sbjct: 247 KLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRN 304
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP---AYVAPEVISRR 186
HRDL+ N+L+ + + K+ DFGL+ + +D G + APE I+
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVI----EDNEYTAREGAKFPIKWTAPEAINFG 360
Query: 187 GYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFP 232
+ K+D+WS G++L ++ G +P+ + + R + + Y+ P
Sbjct: 361 SFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMP 405
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 33/273 (12%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVM 64
G+ M +YE+ L+G+G+F +V A + V K ++Q + E+ ++
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEVRLL 104
Query: 65 RLI-QHPNVMQIYEVMASKTKIY-------FVMEYAKGGELFKKVSKGKLKEDTARKYFQ 116
L+ +H M+ Y V + ++ F M +L + + + + RK+ Q
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 117 QLISAIDFCHSR--GVYHRDLKPENLLL--DENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
Q+ +A+ F + + H DLKPEN+LL + +K+ DFG S + ++
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQR-----IYQXI 219
Query: 173 GTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYKFP 232
+ Y +PEV+ YD D+WS G IL + G F +N + KI + P
Sbjct: 220 QSRFYRSPEVLLGMPYDL-AIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278
Query: 233 TWFSADVRKLLSRILDPNPSTRISIAKIMENPW 265
+ ILD P R K+ + W
Sbjct: 279 -----------AHILDQAPKARKFFEKLPDGTW 300
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 87 FVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLD-EN 145
V EY + FK++ + L + R Y +L+ A+D+CHS+G+ HRD+KP N+++D +
Sbjct: 112 LVFEYINNTD-FKQLYQ-ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQ 169
Query: 146 GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVL 205
L++ D+G LA+ H + + + PE++ D+WS G +L +
Sbjct: 170 KKLRLIDWG---LAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 226
Query: 206 LAGYLPF 212
+ PF
Sbjct: 227 IFRREPF 233
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 29 RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM-LKEGATHSEHRALMSELKILIH 87
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGELFKKVSKG-------KLKEDTARKYFQ- 116
+ + + ++ + TK + ++E+ K G L + K ED + +
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 117 --------QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLL 168
Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIXKDPDXVR 206
Query: 169 HTTCGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAK 226
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + + K
Sbjct: 207 KGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
Query: 227 ADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
+ P + + ++ + + PS R + ++++E+
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 14 LGRLLGQGNFAKVYYAR--HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
L R LG+G F KV+ A +L + + +RE ++ +QH +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFK-----------------KVSKGKLKEDTARKY 114
+++ Y V + V EY K G+L K + +KG+L
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 115 FQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT 174
Q+ S + + S+ HRDL N L+ N ++K+ DFG+S + T
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 175 PAYVAPEVISRRGYDGDKADIWSCGVILY 203
++ PE I R + + +D+WS GVIL+
Sbjct: 199 IRWMPPESIMYRKFTTE-SDVWSFGVILW 226
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 93/247 (37%), Gaps = 72/247 (29%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI--QHP----- 70
+G+G F+ VY L T Q L+VG + +I++ LI HP
Sbjct: 29 IGEGTFSSVY----LATAQ------------LQVG----PEEKIALKHLIPTSHPIRIAA 68
Query: 71 ------------NVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQL 118
NVM + + M Y + ++ +E R+Y L
Sbjct: 69 ELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE--VREYMLNL 126
Query: 119 ISAIDFCHSRGVYHRDLKPENLLLDENGMLK---VTDFGLSA------------------ 157
A+ H G+ HRD+KP N L N LK + DFGL+
Sbjct: 127 FKALKRIHQFGIVHRDVKPSNFLY--NRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQ 184
Query: 158 --------LAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGY 209
+ C + + GTP + APEV+++ D+WS GVI LL+G
Sbjct: 185 QERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
Query: 210 LPFHDSN 216
PF+ ++
Sbjct: 245 YPFYKAS 251
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 87 FVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLD-EN 145
V EY + FK++ + L + R Y +L+ A+D+CHS+G+ HRD+KP N+++D +
Sbjct: 117 LVFEYINNTD-FKQLYQ-ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQ 174
Query: 146 GMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVL 205
L++ D+G LA+ H + + + PE++ D+WS G +L +
Sbjct: 175 KKLRLIDWG---LAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 231
Query: 206 LAGYLPF 212
+ PF
Sbjct: 232 IFRREPF 238
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 14 LGRLLGQGNFAKVYYAR--HLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPN 71
L R LG+G F KV+ A +L Q RE ++ +QH +
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFK----------KVSKG----KLKEDTARKYFQQ 117
+++ Y V + V EY K G+L K +++G +L + QQ
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
+ + + + S+ HRDL N L+ EN ++K+ DFG+S + T +
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 178 VAPEVISRRGYDGDKADIWSCGVILY 203
+ PE I R + + +D+WS GV+L+
Sbjct: 197 MPPESIMYRKFTTE-SDVWSLGVVLW 221
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 14 LGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVM 73
L + LG G F +V+ A + + ++ L E +VM+ +QH ++
Sbjct: 186 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLA-----EANVMKTLQHDKLV 240
Query: 74 QIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTAR--KYFQQLISAIDFCHSRG 129
+++ V+ +K IY + E+ G L F K +G K+ + + Q+ + F R
Sbjct: 241 KLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRN 298
Query: 130 VYHRDLKPENLLLDENGMLKVTDFGLSAL-AKCKHQDGLLHTTCGTPAYVAPEVISRRGY 188
HRDL+ N+L+ + + K+ DFGL+ + AK + + APE I+ +
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK------------WTAPEAINFGSF 346
Query: 189 DGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKADYKFP 232
K+D+WS G++L ++ G +P+ + + R + + Y+ P
Sbjct: 347 T-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMP 389
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 56 QTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-GKLKEDTARKY 114
+ +RE +Q P+V+ I++ ++Y G +L + + G L A
Sbjct: 80 RXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAI 139
Query: 115 FQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGT 174
+Q+ SA+D H+ G HRD+KPEN+L+ + + DFG+++ A + L T GT
Sbjct: 140 VRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIAS-ATTDEKLTQLGNTVGT 198
Query: 175 PAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKA 227
Y APE S + +ADI++ +LY L G P+ L I +A
Sbjct: 199 LYYXAPERFS-ESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQA 250
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 126/278 (45%), Gaps = 28/278 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ +LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKM-LKEGATHSEHRALMSELKILIH 88
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGELFKKVSKGKLK------EDTARKYFQ-- 116
+ + + ++ + TK + ++E+ K G L + + + ED + +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 117 -------QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLH 169
Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL-ARDIXKDPDXVRK 207
Query: 170 TTCGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKA 227
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + + K
Sbjct: 208 GDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
Query: 228 DYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
+ P + + ++ + + PS R + ++++E+
Sbjct: 267 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 89/236 (37%), Gaps = 38/236 (16%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR-EISV 63
G L ++YE+ LG+G F KV G+S VG + R EI+V
Sbjct: 23 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKS----QVALKIIRNVGKYREAARLEINV 78
Query: 64 MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKY--------F 115
++ I+ + + + F EL K + LKE+ + Y
Sbjct: 79 LKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 138
Query: 116 QQLISAIDFCHSRGVYHRDLKPENLLL-------------------DENGMLKVTDFGLS 156
QL A+ F H + H DLKPEN+L +N ++V DFG +
Sbjct: 139 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 198
Query: 157 ALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPF 212
H T T Y PEVI G+ D+WS G IL+ G+ F
Sbjct: 199 TFDHEHHT-----TIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLF 248
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 89/236 (37%), Gaps = 38/236 (16%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR-EISV 63
G L ++YE+ LG+G F KV G+S VG + R EI+V
Sbjct: 14 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKS----QVALKIIRNVGKYREAARLEINV 69
Query: 64 MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKY--------F 115
++ I+ + + + F EL K + LKE+ + Y
Sbjct: 70 LKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 129
Query: 116 QQLISAIDFCHSRGVYHRDLKPENLLL-------------------DENGMLKVTDFGLS 156
QL A+ F H + H DLKPEN+L +N ++V DFG +
Sbjct: 130 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 189
Query: 157 ALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPF 212
H T T Y PEVI G+ D+WS G IL+ G+ F
Sbjct: 190 TFDHEHHT-----TIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLF 239
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ +LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM-LKEGATHSEHRALMSELKILIH 86
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGELFK------------KVSKGKLKEDTAR 112
+ + + ++ + TK + ++E+ K G L KV+ L +D
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 113 -----KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL 167
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIXKDPDXV 205
Query: 168 LHTTCGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIA 225
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K + P + + ++ + + PS R + ++++E+
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 89/236 (37%), Gaps = 38/236 (16%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKR-EISV 63
G L ++YE+ LG+G F KV G+S VG + R EI+V
Sbjct: 46 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKS----QVALKIIRNVGKYREAARLEINV 101
Query: 64 MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKY--------F 115
++ I+ + + + F EL K + LKE+ + Y
Sbjct: 102 LKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 161
Query: 116 QQLISAIDFCHSRGVYHRDLKPENLLL-------------------DENGMLKVTDFGLS 156
QL A+ F H + H DLKPEN+L +N ++V DFG +
Sbjct: 162 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 221
Query: 157 ALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPF 212
H T T Y PEVI G+ D+WS G IL+ G+ F
Sbjct: 222 TFDHEHHT-----TIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLF 271
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ +LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM-LKEGATHSEHRALMSELKILIH 77
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGELFK------------KVSKGKLKEDTAR 112
+ + + ++ + TK + ++E+ K G L KV+ L +D
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 113 -----KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL 167
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIXKDPDXV 196
Query: 168 LHTTCGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIA 225
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K + P + + ++ + + PS R + ++++E+
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ +LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM-LKEGATHSEHRALMSELKILIH 86
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGELFK------------KVSKGKLKEDTAR 112
+ + + ++ + TK + ++E+ K G L KV+ L +D
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 113 -----KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL 167
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPDXV 205
Query: 168 LHTTCGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIA 225
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K + P + + ++ + + PS R + ++++E+
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ +LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM-LKEGATHSEHRALMSELKILIH 77
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGELFK------------KVSKGKLKEDTAR 112
+ + + ++ + TK + + E+ K G L KV+ L +D
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 113 -----KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL 167
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIXKDPDXV 196
Query: 168 LHTTCGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIA 225
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K + P + + ++ + + PS R + ++++E+
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 25/271 (9%)
Query: 13 ELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI----Q 68
+ G+ LG G F KV A G G+ D+ + +S ++++ Q
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTARKYFQQLISAIDFCH 126
H N++ + + + EY G+L F + L+ D A +S D H
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 127 -------------SRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG 173
S+ HRD+ N+LL + K+ DFGL A + ++
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL-ARDIMNDSNYIVKGNAR 227
Query: 174 TPA-YVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKF 231
P ++APE I Y ++D+WS G++L+ + + G P+ + + + K+ K Y+
Sbjct: 228 LPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 286
Query: 232 --PTWFSADVRKLLSRILDPNPSTRISIAKI 260
P + ++ ++ P+ R + +I
Sbjct: 287 AQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 114 YFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG 173
Y Q+ ++F SR HRDL N+LL EN ++K+ DFGL A K+ D +
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGL-ARDIYKNPDYVRKGDTR 262
Query: 174 TP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPF----HDSNLMAMYRKIAKA 227
P ++APE I + Y K+D+WS GV+L+ + + G P+ D + + R+ +
Sbjct: 263 LPLKWMAPESIFDKIY-STKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRM 321
Query: 228 DYKFPTWFSADVRKLLSRILDPNPSTRISIAKIME 262
+ P + + ++ +++ +P R A+++E
Sbjct: 322 --RAPEYSTPEIYQIMLDCWHRDPKERPRFAELVE 354
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 8/200 (4%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG GNF V + + + + ++ RE +M + +P ++++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSKGKLKE---DTARKYFQQLISAIDFCHSRGVYHRD 134
V ++ + VME A GG L K + GK +E + Q+ + + + HRD
Sbjct: 78 VCQAEA-LMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 135 LKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP-AYVAPEVISRRGYDGDKA 193
L N+LL K++DFGLS + P + APE I+ R + ++
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS-SRS 194
Query: 194 DIWSCGVILYVLLA-GYLPF 212
D+WS GV ++ L+ G P+
Sbjct: 195 DVWSYGVTMWEALSYGQKPY 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ +LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM-LKEGATHSEHRALMSELKILIH 88
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGELF--------KKVSKGKLKEDTARKYFQ 116
+ + + ++ + TK + ++E+ K G L + V + ED + +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 117 ---------QLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL 167
Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 149 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPDYV 207
Query: 168 LHTTCGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIA 225
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + +
Sbjct: 208 RKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 266
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K + P + + ++ + + PS R + ++++E+
Sbjct: 267 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 15/210 (7%)
Query: 17 LLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIY 76
+LG+G F KVY R L G V L QT E+ ++ + H N++++
Sbjct: 37 ILGRGGFGKVYKGR-LADGXLVAVKRLKEERTQGGELQFQT--EVEMISMAVHRNLLRLR 93
Query: 77 EVMASKTKIYFVMEYAKGGEL---FKKVSKGKLKEDTARKYFQQLISAI------DFCHS 127
+ T+ V Y G + ++ + + D ++ L SA D C
Sbjct: 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP 153
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPEVISRRG 187
+ + HRD+K N+LLDE V DFGL+ L K + G ++APE +S G
Sbjct: 154 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVRGXIGHIAPEYLS-TG 210
Query: 188 YDGDKADIWSCGVILYVLLAGYLPFHDSNL 217
+K D++ GV+L L+ G F + L
Sbjct: 211 KSSEKTDVFGYGVMLLELITGQRAFDLARL 240
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 111/271 (40%), Gaps = 25/271 (9%)
Query: 13 ELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI----Q 68
+ G+ LG G F KV A G G+ D+ + +S ++++ Q
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGEL--FKKVSKGKLKEDTA-------------RK 113
H N++ + + + EY G+L F + L+ D A
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 114 YFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG 173
+ Q+ + F S+ HRD+ N+LL + K+ DFGL A + ++
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL-ARDIMNDSNYIVKGNAR 227
Query: 174 TPA-YVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKF 231
P ++APE I Y ++D+WS G++L+ + + G P+ + + + K+ K Y+
Sbjct: 228 LPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 286
Query: 232 --PTWFSADVRKLLSRILDPNPSTRISIAKI 260
P + ++ ++ P+ R + +I
Sbjct: 287 AQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ +LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM-LKEGATHSEHRALMSELKILIH 86
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGELFK------------KVSKGKLKEDTAR 112
+ + + ++ + TK + ++E+ K G L KV+ L +D
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 113 -----KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL 167
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPDYV 205
Query: 168 LHTTCGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIA 225
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + +
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K + P + + ++ + + PS R + ++++E+
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ +LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM-LKEGATHSEHRALMSELKILIH 123
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGELFK------------KVSKGKLKEDTAR 112
+ + + ++ + TK + ++E+ K G L KV+ L +D
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 113 -----KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL 167
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPDYV 242
Query: 168 LHTTCGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIA 225
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + +
Sbjct: 243 RKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 301
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K + P + + ++ + + PS R + ++++E+
Sbjct: 302 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 104/263 (39%), Gaps = 31/263 (11%)
Query: 18 LGQGNFAKVYYARHLGTG---QSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQ 74
LG+ F KVY G Q+ + L ++ + E + +QHPNV+
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 75 IYEVMASKTKIYFVMEYAKGGELFK-----------------KVSKGKLKEDTARKYFQQ 117
+ V+ + + Y G+L + + K L+ Q
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
+ + +++ S V H+DL N+L+ + +K++D GL LL + +
Sbjct: 154 IAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRW 213
Query: 178 VAPEVISRRGYDGDKADIWSCGVILYVL----LAGYLPFHDSNLMAMY--RKIAKADYKF 231
+APE I + D +DIWS GV+L+ + L Y + + +++ M R++
Sbjct: 214 MAPEAIMYGKFSID-SDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDC 272
Query: 232 PTWFSADVRKLLSRILDPNPSTR 254
P W A L+ + PS R
Sbjct: 273 PAWVYA----LMIECWNEFPSRR 291
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 32/255 (12%)
Query: 13 ELGRLLGQGNFAKVYYARHLG---TGQSVXXXXXXXXXXLKVGLVDQTKREISVM-RLIQ 68
E G++LG G F KV A G TG S+ + E+ +M +L
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELF-------KKVSKGKLKEDTARK-------- 113
H N++ + IY + EY G+L +K S+ +++ + ++
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 114 ---------YFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQ 164
+ Q+ ++F + HRDL N+L+ ++K+ DFGL A
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGL-ARDIMSDS 226
Query: 165 DGLLHTTCGTPA-YVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYR 222
+ ++ P ++APE + G K+D+WS G++L+ + + G P+ + A +
Sbjct: 227 NYVVRGNARLPVKWMAPESLF-EGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY 285
Query: 223 KIAKADYKFPTWFSA 237
K+ + +K F A
Sbjct: 286 KLIQNGFKMDQPFYA 300
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ +LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM-LKEGATHSEHRALMSELKILIH 77
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGELFK------------KVSKGKLKEDTAR 112
+ + + ++ + TK + + E+ K G L KV+ L +D
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 113 -----KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL 167
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPDYV 196
Query: 168 LHTTCGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIA 225
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K + P + + ++ + + PS R + ++++E+
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI-SVMRLIQH 69
+ +LG+ LG+G F +V A G ++ LK G R + S ++++ H
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM-LKEGATHSEHRALMSELKILIH 77
Query: 70 -PNVMQIYEVMASKTK----IYFVMEYAKGGELFK------------KVSKGKLKEDTAR 112
+ + + ++ + TK + + E+ K G L KV+ L +D
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 113 -----KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGL 167
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPDYV 196
Query: 168 LHTTCGTP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIA 225
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + +
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 226 KADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
K + P + + ++ + + PS R + ++++E+
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 104/263 (39%), Gaps = 31/263 (11%)
Query: 18 LGQGNFAKVYYARHLGTG---QSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQ 74
LG+ F KVY G Q+ + L ++ + E + +QHPNV+
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 75 IYEVMASKTKIYFVMEYAKGGELFK-----------------KVSKGKLKEDTARKYFQQ 117
+ V+ + + Y G+L + + K L+ Q
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 118 LISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAY 177
+ + +++ S V H+DL N+L+ + +K++D GL LL + +
Sbjct: 137 IAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRW 196
Query: 178 VAPEVISRRGYDGDKADIWSCGVILYVL----LAGYLPFHDSNLMAMY--RKIAKADYKF 231
+APE I + D +DIWS GV+L+ + L Y + + +++ M R++
Sbjct: 197 MAPEAIMYGKFSID-SDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDC 255
Query: 232 PTWFSADVRKLLSRILDPNPSTR 254
P W V L+ + PS R
Sbjct: 256 PAW----VYALMIECWNEFPSRR 274
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 41/236 (17%)
Query: 66 LIQHPNVMQ-IYEVMASK---TKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISA 121
+++H N++ I M S+ T+++ + Y + G L+ + L + + + S
Sbjct: 58 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASG 117
Query: 122 IDFCHSR--------GVYHRDLKPENLLLDENGMLKVTDFGLSAL-AKCKHQ-DGLLHTT 171
+ H + HRDLK +N+L+ +NG + D GL+ + ++ +Q D +
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 172 CGTPAYVAPEVISRR----GYDG-DKADIWSCGVILYVLLAGYL----------PFHD-- 214
GT Y+APEV+ +D + DIW+ G++L+ + + PF+D
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237
Query: 215 --SNLMAMYRKIAKADYKFPT----WFS----ADVRKLLSRILDPNPSTRISIAKI 260
RK+ D + P WFS + KL+ NPS R++ +I
Sbjct: 238 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 41/236 (17%)
Query: 66 LIQHPNVMQ-IYEVMASK---TKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISA 121
+++H N++ I M S+ T+++ + Y + G L+ + L + + + S
Sbjct: 87 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASG 146
Query: 122 IDFCH-----SRG---VYHRDLKPENLLLDENGMLKVTDFGLSAL-AKCKHQ-DGLLHTT 171
+ H ++G + HRDLK +N+L+ +NG + D GL+ + ++ +Q D +
Sbjct: 147 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 206
Query: 172 CGTPAYVAPEVISRR----GYDG-DKADIWSCGVILYVLLAGYL----------PFHD-- 214
GT Y+APEV+ +D + DIW+ G++L+ + + PF+D
Sbjct: 207 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 266
Query: 215 --SNLMAMYRKIAKADYKFPT----WFS----ADVRKLLSRILDPNPSTRISIAKI 260
RK+ D + P WFS + KL+ NPS R++ +I
Sbjct: 267 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 322
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 41/236 (17%)
Query: 66 LIQHPNVMQ-IYEVMASK---TKIYFVMEYAKGGELFKKVSKGKLKEDTARKYFQQLISA 121
+++H N++ I M S+ T+++ + Y + G L+ + L + + + S
Sbjct: 58 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASG 117
Query: 122 IDFCHSR--------GVYHRDLKPENLLLDENGMLKVTDFGLSAL-AKCKHQ-DGLLHTT 171
+ H + HRDLK +N+L+ +NG + D GL+ + ++ +Q D +
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 172 CGTPAYVAPEV----ISRRGYDG-DKADIWSCGVILYVLLAGYL----------PFHD-- 214
GT Y+APEV I +D + DIW+ G++L+ + + PF+D
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237
Query: 215 --SNLMAMYRKIAKADYKFPT----WFS----ADVRKLLSRILDPNPSTRISIAKI 260
RK+ D + P WFS + KL+ NPS R++ +I
Sbjct: 238 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 115/284 (40%), Gaps = 45/284 (15%)
Query: 14 LGRLLGQGNFAKVYYAR--HL-GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
LG+ LG+G F KV A HL G + E +V++ + HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGEL------FKKVSKGKLKEDTAR------------ 112
+V+++Y + + ++EYAK G L +KV G L +R
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 113 -------KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ Q+ + + + HRDL N+L+ E +K++DFGLS +D
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLS--RDVYEED 204
Query: 166 GLLHTTCG-TPA-YVAPEVISRRGYDGDKADIWSCGVILYVLLA-------GYLPFHDSN 216
+ + G P ++A E + Y ++D+WS GV+L+ ++ G P N
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
Query: 217 LMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKI 260
L+ ++ + D S ++ +L+ + P R A I
Sbjct: 264 LLKTGHRMERPDN-----CSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 13 ELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI----Q 68
+ G+ LG G F KV A G G+ D+ + +S ++++ Q
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-----------------LKEDTA 111
H N++ + + + EY G+L + + + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
+ Q+ + F S+ HRD+ N+LL + K+ DFGL A + ++
Sbjct: 169 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL-ARDIMNDSNYIVKGN 227
Query: 172 CGTPA-YVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADY 229
P ++APE I Y ++D+WS G++L+ + + G P+ + + + K+ K Y
Sbjct: 228 ARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY 286
Query: 230 KF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
+ P + ++ ++ P+ R + +I
Sbjct: 287 QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 52 GLVDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDT 110
L D+ E +VM+ + +P ++++ + +++ + VME A+ G L K + + + +K+
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN 112
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q+ + + HRDL N+LL K++DFGLS + T
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQT 172
Query: 171 TCGTPA-YVAPEVISRRGYDGDKADIWSCGVILY 203
P + APE I+ + K+D+WS GV+++
Sbjct: 173 HGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 205
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 60 EISVMRLIQHPNVMQIYEVMASKTKIY--FVMEYAKGGELFKKVSKGK---LKEDTARKY 114
E +R+ HPNV+ + S + + + G L+ + +G + + A K+
Sbjct: 57 ECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKF 116
Query: 115 FQQLISAIDFCHSRG--VYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTC 172
+ + F H+ + L ++++DE+ +++ ++ + G ++
Sbjct: 117 ALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARIS---MADVKFSFQSPGRMYA-- 171
Query: 173 GTPAYVAPEVISRRGYDGDK--ADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIAKADYK 230
PA+VAPE + ++ D ++ AD+WS V+L+ L+ +PF D + M + K+A +
Sbjct: 172 --PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLR 229
Query: 231 --FPTWFSADVRKLLSRILDPNPSTR 254
P S V KL+ ++ +P+ R
Sbjct: 230 PTIPPGISPHVSKLMKICMNEDPAKR 255
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 115/284 (40%), Gaps = 45/284 (15%)
Query: 14 LGRLLGQGNFAKVYYAR--HL-GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
LG+ LG+G F KV A HL G + E +V++ + HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGEL------FKKVSKGKLKEDTAR------------ 112
+V+++Y + + ++EYAK G L +KV G L +R
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 113 -------KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ Q+ + + + HRDL N+L+ E +K++DFGLS +D
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS--RDVYEED 204
Query: 166 GLLHTTCG-TPA-YVAPEVISRRGYDGDKADIWSCGVILYVLLA-------GYLPFHDSN 216
+ + G P ++A E + Y ++D+WS GV+L+ ++ G P N
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
Query: 217 LMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKI 260
L+ ++ + D S ++ +L+ + P R A I
Sbjct: 264 LLKTGHRMERPDN-----CSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 115/270 (42%), Gaps = 30/270 (11%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLV-----DQTKREISVM 64
Q++ LGR+LG+G F V R Q LK ++ ++ RE + M
Sbjct: 23 QQFTLGRMLGKGEFGSV---REAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 65 RLIQHPNVMQIYEV-MASKTK-----IYFVMEYAKGGELFKKVSKGKLKED-------TA 111
+ HP+V ++ V + S+ K ++ + K G+L + ++ E+ T
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
++ + +++ SR HRDL N +L E+ + V DFGLS + +
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS---RKIYSGDYYRQG 196
Query: 172 CGT--PA-YVAPEVISRRGYDGDKADIWSCGVILY-VLLAGYLPFHDSNLMAMYRKIAKA 227
C + P ++A E ++ Y +D+W+ GV ++ ++ G P+ +Y +
Sbjct: 197 CASKLPVKWLALESLADNLYTV-HSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG 255
Query: 228 D-YKFPTWFSADVRKLLSRILDPNPSTRIS 256
+ K P +V L+ + +P R S
Sbjct: 256 NRLKQPPECMEEVYDLMYQCWSADPKQRPS 285
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 115/284 (40%), Gaps = 45/284 (15%)
Query: 14 LGRLLGQGNFAKVYYAR--HL-GTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHP 70
LG+ LG+G F KV A HL G + E +V++ + HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 71 NVMQIYEVMASKTKIYFVMEYAKGGEL------FKKVSKGKLKEDTAR------------ 112
+V+++Y + + ++EYAK G L +KV G L +R
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 113 -------KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ Q+ + + + HRDL N+L+ E +K++DFGLS +D
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS--RDVYEED 204
Query: 166 GLLHTTCG-TPA-YVAPEVISRRGYDGDKADIWSCGVILYVLLA-------GYLPFHDSN 216
+ + G P ++A E + Y ++D+WS GV+L+ ++ G P N
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN 263
Query: 217 LMAMYRKIAKADYKFPTWFSADVRKLLSRILDPNPSTRISIAKI 260
L+ ++ + D S ++ +L+ + P R A I
Sbjct: 264 LLKTGHRMERPDN-----CSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 52 GLVDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDT 110
L D+ E +VM+ + +P ++++ + +++ + VME A+ G L K + + + +K+
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN 128
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q+ + + HRDL N+LL K++DFGLS + T
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 171 TCGTPA-YVAPEVISRRGYDGDKADIWSCGVILY 203
P + APE I+ + K+D+WS GV+++
Sbjct: 189 HGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 221
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 52 GLVDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDT 110
L D+ E +VM+ + +P ++++ + +++ + VME A+ G L K + + + +K+
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN 128
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q+ + + HRDL N+LL K++DFGLS + T
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 171 TCGTPA-YVAPEVISRRGYDGDKADIWSCGVILY 203
P + APE I+ + K+D+WS GV+++
Sbjct: 189 HGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 221
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 52 GLVDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDT 110
L D+ E +VM+ + +P ++++ + +++ + VME A+ G L K + + + +K+
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN 112
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q+ + + HRDL N+LL K++DFGLS + T
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 172
Query: 171 TCGTPA-YVAPEVISRRGYDGDKADIWSCGVILY 203
P + APE I+ + K+D+WS GV+++
Sbjct: 173 HGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 205
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 52 GLVDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDT 110
L D+ E +VM+ + +P ++++ + +++ + VME A+ G L K + + + +K+
Sbjct: 68 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN 126
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q+ + + HRDL N+LL K++DFGLS + T
Sbjct: 127 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 186
Query: 171 TCGTPA-YVAPEVISRRGYDGDKADIWSCGVILY 203
P + APE I+ + K+D+WS GV+++
Sbjct: 187 HGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 219
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 7/194 (3%)
Query: 18 LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQHPNVMQIYE 77
LG GNF V + + + + ++ RE +M + +P ++++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 78 VMASKTKIYFVMEYAKGGELFKKVSKGKLKE---DTARKYFQQLISAIDFCHSRGVYHRD 134
V ++ + VME A GG L K + GK +E + Q+ + + + HR+
Sbjct: 404 VCQAEA-LMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN 461
Query: 135 LKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTP-AYVAPEVISRRGYDGDKA 193
L N+LL K++DFGLS + P + APE I+ R + ++
Sbjct: 462 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS-SRS 520
Query: 194 DIWSCGVILYVLLA 207
D+WS GV ++ L+
Sbjct: 521 DVWSYGVTMWEALS 534
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 52 GLVDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDT 110
L D+ E +VM+ + +P ++++ + +++ + VME A+ G L K + + + +K+
Sbjct: 60 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN 118
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q+ + + HRDL N+LL K++DFGLS + T
Sbjct: 119 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 178
Query: 171 TCGTPA-YVAPEVISRRGYDGDKADIWSCGVILY 203
P + APE I+ + K+D+WS GV+++
Sbjct: 179 HGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 211
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 52 GLVDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDT 110
L D+ E +VM+ + +P ++++ + +++ + VME A+ G L K + + + +K+
Sbjct: 50 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN 108
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q+ + + HRDL N+LL K++DFGLS + T
Sbjct: 109 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168
Query: 171 TCGTPA-YVAPEVISRRGYDGDKADIWSCGVILY 203
P + APE I+ + K+D+WS GV+++
Sbjct: 169 HGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 201
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPN 71
++LG G F VY + G+ V L+ + +EI VM + +P+
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 79
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF----QQLISAIDFCHS 127
V ++ + + T + +M+ G L V + K ++ +Y Q+ +++
Sbjct: 80 VCRLLGICLTST-VQLIMQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 136
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA-YVAPEVISR 185
R + HRDL N+L+ +K+TDFGL+ L + ++ H G P ++A E I
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 194
Query: 186 RGYDGDKADIWSCGVILYVLLA 207
R Y ++D+WS GV ++ L+
Sbjct: 195 RIYT-HQSDVWSYGVTVWELMT 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 52 GLVDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDT 110
L D+ E +VM+ + +P ++++ + +++ + VME A+ G L K + + + +K+
Sbjct: 48 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKN 106
Query: 111 ARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHT 170
+ Q+ + + HRDL N+LL K++DFGLS + T
Sbjct: 107 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 166
Query: 171 TCGTPA-YVAPEVISRRGYDGDKADIWSCGVILY 203
P + APE I+ + K+D+WS GV+++
Sbjct: 167 HGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMW 199
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 53 LVDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTA 111
L D+ E +VM+ + +P ++++ + +++ + VME A+ G L K + + + +K+
Sbjct: 413 LKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI 471
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
+ Q+ + + HRDL N+LL K++DFGLS + T
Sbjct: 472 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531
Query: 172 CGTPA-YVAPEVISRRGYDGDKADIWSCGVILY 203
P + APE I+ + K+D+WS GV+++
Sbjct: 532 GKWPVKWYAPECINYYKFS-SKSDVWSFGVLMW 563
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 98/253 (38%), Gaps = 43/253 (16%)
Query: 53 LVDQTKREISVMRLIQHPNVMQIYEVMA-----SKTKIYFVMEYAKGGELFKKVSKGKL- 106
L + REI ++ HPN++ + ++ + K+Y V E + +L + + ++
Sbjct: 72 LCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIV 130
Query: 107 -KEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ + ++ + H GV HRDL P N+LL +N + + DF LA+ D
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN---LAREDTAD 187
Query: 166 GLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIA 225
Y APE++ + D+WS G ++ + F S KI
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
Query: 226 KA------------------DYKFPTWFSADVRK--------------LLSRILDPNPST 253
+ DY + + R L++++L+ NP
Sbjct: 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR 307
Query: 254 RISIAKIMENPWF 266
RIS + + +P+F
Sbjct: 308 RISTEQALRHPYF 320
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 111/280 (39%), Gaps = 34/280 (12%)
Query: 13 ELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLI----Q 68
+ G+ LG G F KV A G G+ D+ + +S ++++ Q
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 69 HPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSK-----------------GKLKEDTA 111
H N++ + + + EY G+L + + G KED
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 112 R-------KYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQ 164
+ Q+ + F S+ HRD+ N+LL + K+ DFGL A
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL-ARDIMNDS 212
Query: 165 DGLLHTTCGTPA-YVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYR 222
+ ++ P ++APE I Y ++D+WS G++L+ + + G P+ + + +
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 271
Query: 223 KIAKADYKF--PTWFSADVRKLLSRILDPNPSTRISIAKI 260
K+ K Y+ P + ++ ++ P+ R + +I
Sbjct: 272 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 53 LVDQTKREISVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK-LKEDTA 111
L D+ E +VM+ + +P ++++ + +++ + VME A+ G L K + + + +K+
Sbjct: 414 LKDELLAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI 472
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTT 171
+ Q+ + + HRDL N+LL K++DFGLS + T
Sbjct: 473 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 532
Query: 172 CGTPA-YVAPEVISRRGYDGDKADIWSCGVILY 203
P + APE I+ + K+D+WS GV+++
Sbjct: 533 GKWPVKWYAPECINYYKFS-SKSDVWSFGVLMW 564
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 98/253 (38%), Gaps = 43/253 (16%)
Query: 53 LVDQTKREISVMRLIQHPNVMQIYEVMA-----SKTKIYFVMEYAKGGELFKKVSKGKL- 106
L + REI ++ HPN++ + ++ + K+Y V E + +L + + ++
Sbjct: 72 LCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIV 130
Query: 107 -KEDTARKYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQD 165
+ + ++ + H GV HRDL P N+LL +N + + DF LA+ D
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN---LAREDTAD 187
Query: 166 GLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPFHDSNLMAMYRKIA 225
Y APE++ + D+WS G ++ + F S KI
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
Query: 226 KA------------------DYKFPTWFSADVRK--------------LLSRILDPNPST 253
+ DY + + R L++++L+ NP
Sbjct: 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR 307
Query: 254 RISIAKIMENPWF 266
RIS + + +P+F
Sbjct: 308 RISTEQALRHPYF 320
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 58/235 (24%)
Query: 10 QKYELGRLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISVMRLIQH 69
K+ LGR +G G+F ++Y ++ T + V +K+ V +H
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVA---------IKLENVK-----------TKH 46
Query: 70 PNVM---QIYEVMASKTKIYFVMEYAKGGE---------------LFKKVSKGKLKEDTA 111
P ++ +IY ++ T I V + G+ LF S+ KL T
Sbjct: 47 PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSR-KLSLKTV 105
Query: 112 RKYFQQLISAIDFCHSRGVYHRDLKPENLLLD---ENGMLKVTDFGLSALAKCKHQDGLL 168
Q+I+ ++F HS+ HRD+KP+N L+ + + DFGL+ K++D
Sbjct: 106 LMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK----KYRDTST 161
Query: 169 H---------TTCGTPAYVAPEVISRRGYDGDKA-DIWSCGVILYVLLAGYLPFH 213
H GT Y + V + G + + D+ S G +L L G LP+
Sbjct: 162 HQHIPYRENKNLTGTARYAS--VNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPN 71
++LG G F VY + G+ V L+ + +EI VM + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 80
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF----QQLISAIDFCHS 127
V ++ + + T + +M+ G L V + K ++ +Y Q+ +++
Sbjct: 81 VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 137
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA-YVAPEVISR 185
R + HRDL N+L+ +K+TDFGL+ L + ++ H G P ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 195
Query: 186 RGYDGDKADIWSCGVILYVLLA 207
R Y ++D+WS GV ++ L+
Sbjct: 196 RIYT-HQSDVWSYGVTVWELMT 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPN 71
++LG G F VY + G+ V L+ + +EI VM + +P+
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 82
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF----QQLISAIDFCHS 127
V ++ + + T + +M+ G L V + K ++ +Y Q+ +++
Sbjct: 83 VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 139
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA-YVAPEVISR 185
R + HRDL N+L+ +K+TDFGL+ L + ++ H G P ++A E I
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 197
Query: 186 RGYDGDKADIWSCGVILYVLLA 207
R Y ++D+WS GV ++ L+
Sbjct: 198 RIYT-HQSDVWSYGVTVWELMT 218
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPN 71
++LG G F VY + G+ V L+ + +EI VM + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 81
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF----QQLISAIDFCHS 127
V ++ + + T + +M+ G L V + K ++ +Y Q+ +++
Sbjct: 82 VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 138
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA-YVAPEVISR 185
R + HRDL N+L+ +K+TDFGL+ L + ++ H G P ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 196
Query: 186 RGYDGDKADIWSCGVILYVLLA 207
R Y ++D+WS GV ++ L+
Sbjct: 197 RIYT-HQSDVWSYGVTVWELMT 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPN 71
++LG G F VY + G+ V L+ + +EI VM + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF----QQLISAIDFCHS 127
V ++ + + T + +M+ G L V + K ++ +Y Q+ +++
Sbjct: 79 VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 135
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA-YVAPEVISR 185
R + HRDL N+L+ +K+TDFGL+ L + ++ H G P ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 193
Query: 186 RGYDGDKADIWSCGVILYVLLA 207
R Y ++D+WS GV ++ L+
Sbjct: 194 RIYT-HQSDVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPN 71
++LG G F VY + G+ V L+ + +EI VM + +P+
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 79
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF----QQLISAIDFCHS 127
V ++ + + T + +M+ G L V + K ++ +Y Q+ +++
Sbjct: 80 VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 136
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA-YVAPEVISR 185
R + HRDL N+L+ +K+TDFGL+ L + ++ H G P ++A E I
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 194
Query: 186 RGYDGDKADIWSCGVILYVLLA 207
R Y ++D+WS GV ++ L+
Sbjct: 195 RIYT-HQSDVWSYGVTVWELMT 215
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 8/206 (3%)
Query: 8 LMQKYELGRL--LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISV 63
++++ EL R+ LG G F VY + G++V G + E +
Sbjct: 11 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI 70
Query: 64 MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK--LKEDTARKYFQQLISA 121
M + HP+++++ V S T I V + G L + V + K + + Q+
Sbjct: 71 MASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 129
Query: 122 IDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
+ + R + HRDL N+L+ +K+TDFGL+ L + ++ ++A E
Sbjct: 130 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 189
Query: 182 VISRRGYDGDKADIWSCGVILYVLLA 207
I R + ++D+WS GV ++ L+
Sbjct: 190 CIHYRKFT-HQSDVWSYGVTIWELMT 214
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 95/251 (37%), Gaps = 41/251 (16%)
Query: 5 GKVLMQKYELGRLLGQGNFAKVYYA-RHLGTGQSVXXXXXXXXXXLKVGLVDQTKREISV 63
G L ++YE+ LG+G F +V H G V K + + EI+V
Sbjct: 28 GDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK----EAARLEINV 83
Query: 64 MRLIQHPN------VMQIYEVM--ASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF 115
+ I + +Q+++ I F + + K + R
Sbjct: 84 LEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMA 143
Query: 116 QQLISAIDFCHSRGVYHRDLKPENLLL---------------DENGM----LKVTDFGLS 156
QL A+ F H + H DLKPEN+L DE + ++V DFG +
Sbjct: 144 FQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA 203
Query: 157 ALAKCKHQDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPF--HD 214
H T T Y APEVI G+ D+WS G I++ G+ F HD
Sbjct: 204 TFDHEHHS-----TIVSTRHYRAPEVILELGW-SQPCDVWSIGCIIFEYYVGFTLFQTHD 257
Query: 215 S-NLMAMYRKI 224
+ +AM +I
Sbjct: 258 NREHLAMMERI 268
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 8/206 (3%)
Query: 8 LMQKYELGRL--LGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTK--REISV 63
++++ EL R+ LG G F VY + G++V G + E +
Sbjct: 34 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI 93
Query: 64 MRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGK--LKEDTARKYFQQLISA 121
M + HP+++++ V S T I V + G L + V + K + + Q+
Sbjct: 94 MASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 152
Query: 122 IDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCGTPAYVAPE 181
+ + R + HRDL N+L+ +K+TDFGL+ L + ++ ++A E
Sbjct: 153 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 212
Query: 182 VISRRGYDGDKADIWSCGVILYVLLA 207
I R + ++D+WS GV ++ L+
Sbjct: 213 CIHYRKFT-HQSDVWSYGVTIWELMT 237
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 114 YFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG 173
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPDYVRKGDAR 256
Query: 174 TP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKF 231
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + + K +
Sbjct: 257 LPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 315
Query: 232 --PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
P + + ++ + + PS R + ++++E+
Sbjct: 316 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 114 YFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG 173
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPDYVRKGDAR 263
Query: 174 TP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKF 231
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + + K +
Sbjct: 264 LPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 322
Query: 232 --PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
P + + ++ + + PS R + ++++E+
Sbjct: 323 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 114 YFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG 173
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPDYVRKGDAR 254
Query: 174 TP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKF 231
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + + K +
Sbjct: 255 LPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 313
Query: 232 --PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
P + + ++ + + PS R + ++++E+
Sbjct: 314 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 114 YFQQLISAIDFCHSRGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG 173
Y Q+ ++F SR HRDL N+LL E ++K+ DFGL A K D +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPDYVRKGDAR 261
Query: 174 TP-AYVAPEVISRRGYDGDKADIWSCGVILYVLLA-GYLPFHDSNLMAMYRKIAKADYKF 231
P ++APE I R Y ++D+WS GV+L+ + + G P+ + + + K +
Sbjct: 262 LPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 320
Query: 232 --PTWFSADVRKLLSRILDPNPSTRISIAKIMEN 263
P + + ++ + + PS R + ++++E+
Sbjct: 321 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPN 71
++LG G F VY + G+ V L+ + +EI VM + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF----QQLISAIDFCHS 127
V ++ + + T + + + G L V + K ++ +Y Q+ +++
Sbjct: 79 VCRLLGICLTST-VQLITQLMPFGXLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 135
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA-YVAPEVISR 185
R + HRDL N+L+ +K+TDFGL+ L + ++ H G P ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 193
Query: 186 RGYDGDKADIWSCGVILYVLLA 207
R Y ++D+WS GV ++ L+
Sbjct: 194 RIYT-HQSDVWSYGVTVWELMT 214
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 40/229 (17%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGT----------GQSVXXXXXXXXXXL--KVGLVDQTK 58
+Y L R LG G+F+ V+ A+ + G V L +V D TK
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 59 REI----SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGE----LFKKVSKGKLKEDT 110
+ +++L+ H N ++ VM + GE L KK +
Sbjct: 80 EDSMGANHILKLLDHFN-------HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 111 ARKYFQQLISAIDFCHSR-GVYHRDLKPENLLLD-----ENGM-LKVTDFGLSALAKCKH 163
++ +QL+ +D+ H R G+ H D+KPEN+L++ EN + +K+ D G C +
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG----NACWY 188
Query: 164 QDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPF 212
D + T Y +PEV+ + G ADIWS +++ L+ G F
Sbjct: 189 -DEHYTNSIQTREYRSPEVLLGAPW-GCGADIWSTACLIFELITGDFLF 235
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 40/229 (17%)
Query: 11 KYELGRLLGQGNFAKVYYARHLGT----------GQSVXXXXXXXXXXL--KVGLVDQTK 58
+Y L R LG G+F+ V+ A+ + G V L +V D TK
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 59 REI----SVMRLIQHPNVMQIYEVMASKTKIYFVMEYAKGGE----LFKKVSKGKLKEDT 110
+ +++L+ H N ++ VM + GE L KK +
Sbjct: 80 EDSMGANHILKLLDHFN-------HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 111 ARKYFQQLISAIDFCHSR-GVYHRDLKPENLLLD-----ENGM-LKVTDFGLSALAKCKH 163
++ +QL+ +D+ H R G+ H D+KPEN+L++ EN + +K+ D G C +
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG----NACWY 188
Query: 164 QDGLLHTTCGTPAYVAPEVISRRGYDGDKADIWSCGVILYVLLAGYLPF 212
D + T Y +PEV+ + G ADIWS +++ L+ G F
Sbjct: 189 -DEHYTNSIQTREYRSPEVLLGAPW-GCGADIWSTACLIFELITGDFLF 235
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPN 71
++LG G F VY + G+ V L+ + +EI VM + +P+
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIME--LREATSPKANKEILDEAYVMASVDNPH 112
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF----QQLISAIDFCHS 127
V ++ + + T + + + G L V + K ++ +Y Q+ +++
Sbjct: 113 VCRLLGICLTST-VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 169
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA-YVAPEVISR 185
R + HRDL N+L+ +K+TDFGL+ L + ++ H G P ++A E I
Sbjct: 170 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 227
Query: 186 RGYDGDKADIWSCGVILYVLLA 207
R Y ++D+WS GV ++ L+
Sbjct: 228 RIYT-HQSDVWSYGVTVWELMT 248
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPN 71
++LG G F VY + G+ V L+ + +EI VM + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 80
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF----QQLISAIDFCHS 127
V ++ + + T + + + G L V + K ++ +Y Q+ +++
Sbjct: 81 VCRLLGICLTST-VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 137
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA-YVAPEVISR 185
R + HRDL N+L+ +K+TDFGL+ L + ++ H G P ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 195
Query: 186 RGYDGDKADIWSCGVILYVLLA 207
R Y ++D+WS GV ++ L+
Sbjct: 196 RIYT-HQSDVWSYGVTVWELMT 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPN 71
++LG G F VY + G+ V L+ + +EI VM + +P+
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 88
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF----QQLISAIDFCHS 127
V ++ + + T + + + G L V + K ++ +Y Q+ +++
Sbjct: 89 VCRLLGICLTST-VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLED 145
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA-YVAPEVISR 185
R + HRDL N+L+ +K+TDFGL+ L + ++ H G P ++A E I
Sbjct: 146 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 203
Query: 186 RGYDGDKADIWSCGVILYVLLA-GYLPF 212
R Y ++D+WS GV ++ L+ G P+
Sbjct: 204 RIYT-HQSDVWSYGVTVWELMTFGSKPY 230
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 16 RLLGQGNFAKVYYARHLGTGQSVXXXXXXXXXXLKVGLVDQTKREI----SVMRLIQHPN 71
++LG G F VY + G+ V L+ + +EI VM + +P+
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 75
Query: 72 VMQIYEVMASKTKIYFVMEYAKGGELFKKVSKGKLKEDTARKYF----QQLISAIDFCHS 127
V ++ + + T + + + G L V + K ++ +Y Q+ +++
Sbjct: 76 VCRLLGICLTST-VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAEGMNYLED 132
Query: 128 RGVYHRDLKPENLLLDENGMLKVTDFGLSALAKCKHQDGLLHTTCG-TPA-YVAPEVISR 185
R + HRDL N+L+ +K+TDFGL+ L + ++ H G P ++A E I
Sbjct: 133 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILH 190
Query: 186 RGYDGDKADIWSCGVILYVLLA 207
R Y ++D+WS GV ++ L+
Sbjct: 191 RIYT-HQSDVWSYGVTVWELMT 211
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,121,576
Number of Sequences: 62578
Number of extensions: 467682
Number of successful extensions: 4564
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 1026
Number of HSP's gapped (non-prelim): 1261
length of query: 450
length of database: 14,973,337
effective HSP length: 102
effective length of query: 348
effective length of database: 8,590,381
effective search space: 2989452588
effective search space used: 2989452588
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)