BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045216
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZR2|ASD2_ARATH Alpha-L-arabinofuranosidase 2 OS=Arabidopsis thaliana GN=ASD2 PE=2
SV=1
Length = 674
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 72/115 (62%), Gaps = 33/115 (28%)
Query: 9 EASIRPWEDRPGHFGDIWMYWTDDGLGYFEF----------------------------- 39
+ ++R WE+RPGH+GD+W YWTDDGLG+FEF
Sbjct: 282 KETVRAWEERPGHYGDVWKYWTDDGLGHFEFFQLAEDLGASPIWVFNNGISHNDQVETKN 341
Query: 40 ----LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNEDCGKKNYSG 90
++EA+D IEFAR D NSTWGSVRAAMGHP+PF+L+YVA+GNEDC K Y G
Sbjct: 342 VMPFVQEAIDGIEFARGDSNSTWGSVRAAMGHPEPFELKYVAVGNEDCFKSYYRG 396
>sp|Q9SG80|ASD1_ARATH Alpha-L-arabinofuranosidase 1 OS=Arabidopsis thaliana GN=ASD1 PE=1
SV=1
Length = 678
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 71/118 (60%), Gaps = 33/118 (27%)
Query: 11 SIRPWEDRPGHFGDIWMYWTDDGLGYFEF------------------------------- 39
++ PWE+RPGHFGD+W YWTDDGLG+FEF
Sbjct: 285 TVGPWEERPGHFGDVWKYWTDDGLGHFEFFQMAEDIGAAPIWVFNNGISHNDEVETASIM 344
Query: 40 --LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNEDCGKKNYSGLHAVL 95
++EALD IEFAR D NSTWGSVRA MG +PF+L+YVAIGNEDCGK Y G + V
Sbjct: 345 PFVQEALDGIEFARGDANSTWGSVRAKMGRQEPFELKYVAIGNEDCGKTYYRGNYIVF 402
>sp|P82593|ABF1_STRCX Alpha-N-arabinofuranosidase 1 OS=Streptomyces chartreusis PE=1 SV=1
Length = 825
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 38/117 (32%)
Query: 3 KKSISLEASIRPWEDRPGHFGDIWMYWTDDGLGYFEF----------------------- 39
K+S + ++ P E+R + + W Y GLGY+E+
Sbjct: 266 KRSYQWKDTVGPVEERATN-ANFWGYNQSYGLGYYEYFRFSEDIGAMPLPVVPALVTGCG 324
Query: 40 --------------LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNED 82
+++ LD IEFA S WG VRA MGHP PF L ++ +GNE+
Sbjct: 325 QNKAVDDEALLKRHIQDTLDLIEFANGPATSKWGKVRAEMGHPRPFRLTHLEVGNEE 381
>sp|Q0CTV2|ABFA_ASPTN Probable alpha-N-arabinofuranosidase A OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=abfA PE=3 SV=1
Length = 628
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 38/109 (34%)
Query: 11 SIRPWEDRPGHFGDIWMYWTDDGLGYFEFL------------------------------ 40
+I P E+RPGH G W Y+ DGLG E+L
Sbjct: 262 TIGPLENRPGHQG-TWGYFNTDGLGLDEYLYWCEDMNLTPVLGVWAGFALESGGNTPITG 320
Query: 41 -------KEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNED 82
++ L+ +E+ DP++T+G +RA+ G +P+++ V IGNED
Sbjct: 321 DALTPYIEDVLNELEYVLGDPSTTYGKLRASYGREEPWNVTLVEIGNED 369
>sp|Q2U790|ABFA_ASPOR Probable alpha-N-arabinofuranosidase A OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=abfA PE=3 SV=2
Length = 629
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 38/109 (34%)
Query: 11 SIRPWEDRPGHFGDIWMYWTDDGLG---YF------------------------------ 37
+I P E+RPG GD W Y+ DGLG YF
Sbjct: 262 TIGPVENRPGRQGD-WSYYNTDGLGLDEYFYWCEDMGLTPVLGVWAGFALESGGNTPITG 320
Query: 38 ----EFLKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNED 82
++ + L+ +E+ D ++ +GS+RA+ G +P+ L V IGNED
Sbjct: 321 DALKPYIDDVLNELEYVLGDASTKYGSLRASYGRKEPWKLTMVEIGNED 369
>sp|B8NKA3|ABFA_ASPFN Probable alpha-N-arabinofuranosidase A OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=abfA PE=3 SV=2
Length = 629
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 38/109 (34%)
Query: 11 SIRPWEDRPGHFGDIWMYWTDDGLG---YF------------------------------ 37
+I P E+RPG GD W Y+ DGLG YF
Sbjct: 262 TIGPVENRPGRQGD-WSYYNTDGLGLDEYFYWCEDMGLTPVLGVWAGFALESGGNTPITG 320
Query: 38 ----EFLKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNED 82
++ + L+ +E+ D ++ +GS+RA+ G +P+ L V IGNED
Sbjct: 321 DALKPYIDDVLNELEYVLGDASTKYGSLRASYGRKEPWKLTMVEIGNED 369
>sp|P42254|ABFA_ASPNG Alpha-N-arabinofuranosidase A OS=Aspergillus niger GN=abfA PE=1
SV=1
Length = 628
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 38/103 (36%)
Query: 17 DRPGHFGDIWMYWTDDGLGYFEF------------------------------------- 39
DRPG G W Y+ DGLG E+
Sbjct: 268 DRPGREG-TWTYYNTDGLGLHEYFYWCEDLGLVPVLGVWDGFALESGGNTPLTGDALTPY 326
Query: 40 LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNED 82
+ + L+ +E+ D ++T+G+ RAA G +P++L V IGNED
Sbjct: 327 IDDVLNELEYILGDTSTTYGAWRAANGQEEPWNLTMVEIGNED 369
>sp|A2Q7E0|ABFA_ASPNC Probable alpha-N-arabinofuranosidase A OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=abfA PE=3 SV=1
Length = 628
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 38/103 (36%)
Query: 17 DRPGHFGDIWMYWTDDGLGYFEF------------------------------------- 39
DRPG G W Y+ DGLG E+
Sbjct: 268 DRPGREG-TWTYYNTDGLGLHEYFYWCEDLGLVPVLGVWDGFALESGGNTPLTGDALTPY 326
Query: 40 LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNED 82
+ + L+ +E+ D ++T+G+ RAA G +P++L V IGNED
Sbjct: 327 IDDVLNELEYILGDTSTTYGAWRAANGQEEPWNLTMVEIGNED 369
>sp|Q8NK90|ABFA_ASPKW Alpha-N-arabinofuranosidase A OS=Aspergillus kawachii (strain NBRC
4308) GN=abfA PE=1 SV=2
Length = 628
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 38/103 (36%)
Query: 17 DRPGHFGDIWMYWTDDGLGYFEF------------------------------------- 39
DRPG G W Y+ DGLG E+
Sbjct: 268 DRPGREG-TWTYYNTDGLGLHEYFYWCEDLGLVPVLGVWDGFALESGGNTPITGDALTPY 326
Query: 40 LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNED 82
+ + L+ +E+ D ++T+G+ RAA G +P++L V IGNED
Sbjct: 327 IDDVLNELEYILGDTSTTYGAWRAANGQEEPWNLTMVEIGNED 369
>sp|Q96X54|ABFA_ASPAW Probable alpha-N-arabinofuranosidase A OS=Aspergillus awamori
GN=abfA PE=1 SV=1
Length = 628
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 38/103 (36%)
Query: 17 DRPGHFGDIWMYWTDDGLGYFEF------------------------------------- 39
DRPG G W Y+ DGLG E+
Sbjct: 268 DRPGREG-TWTYYNTDGLGLHEYFYWCEDLGLVPVLGVWDGFALESGGNTPITGDALTPY 326
Query: 40 LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNED 82
+ + L+ +E+ D ++T+G+ RAA G +P++L V IGNED
Sbjct: 327 IDDVLNELEYILGDTSTTYGAWRAANGQEEPWNLTMVEIGNED 369
>sp|Q5BA89|ABFA_EMENI Probable alpha-N-arabinofuranosidase A OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=abfA PE=3 SV=1
Length = 565
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Query: 54 PNSTWGSVRAAMGHPDPFDLRYVAIGNEDCGKKNYSG 90
P++ +G++RA GHPDP+ ++Y+ IGNED +YSG
Sbjct: 249 PSTPFGALRARNGHPDPWPIQYIEIGNED----DYSG 281
>sp|P53627|ABFA_STRLI Alpha-N-arabinofuranosidase OS=Streptomyces lividans GN=abfA PE=1
SV=1
Length = 662
Score = 37.0 bits (84), Expect = 0.041, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 23/96 (23%)
Query: 9 EASIRPWEDRPGHFGDIWMYWTDDGLG---YFEFLK--------------------EALD 45
E S+ P EDRP W + G Y FLK EAL+
Sbjct: 80 EDSVGPVEDRPRRLDLAWRSTETNRFGLSEYIAFLKKIGPQAEPMMAVNLGTRGVAEALE 139
Query: 46 SIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNE 81
E+A + +RA G DPF +R +GNE
Sbjct: 140 LQEYANHPSGTALSDLRAEHGDKDPFGIRLWCLGNE 175
>sp|B8NIX4|ABFC_ASPFN Probable alpha-N-arabinofuranosidase C OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=abfC PE=3 SV=1
Length = 504
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 40 LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNEDCG 84
L EAL +E+ N+ + ++R G +P++++Y A+GNE G
Sbjct: 141 LDEALAWVEYCNGTGNTYYANLRRKNGREEPYNVKYWALGNETWG 185
>sp|A2QQ94|ABFC_ASPNC Probable alpha-N-arabinofuranosidase C OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=abfC PE=3 SV=1
Length = 505
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 21/94 (22%)
Query: 12 IRPWEDRPGHFGDIWMYWTDDGLGYFEFLK---------------------EALDSIEFA 50
+ P E RP W+ + G EFLK EAL +E+
Sbjct: 92 VGPKEKRPARPELAWLGTETNQFGTDEFLKWCEVLGTEPYFCLNFGTGTLDEALAWVEYC 151
Query: 51 RSDPNSTWGSVRAAMGHPDPFDLRYVAIGNEDCG 84
++ + ++R G +P++++Y A+GNE G
Sbjct: 152 NGTKDTYYANLRRKNGREEPYNVKYWALGNETWG 185
>sp|Q0D1I6|ABFC_ASPTN Probable alpha-N-arabinofuranosidase C OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=abfC PE=3 SV=1
Length = 504
Score = 33.5 bits (75), Expect = 0.45, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 40 LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNEDCG 84
L EAL +E+ ++ + ++R G +P++++Y A+GNE G
Sbjct: 141 LDEALAWVEYCNGTRDTYYANLRRKNGREEPYNVKYWALGNETWG 185
>sp|A1CQC3|ABFC_ASPCL Probable alpha-N-arabinofuranosidase C OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=abfC PE=3 SV=2
Length = 505
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 40 LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNEDCG 84
L EAL +E+ ++ + ++R G +P++++Y A+GNE G
Sbjct: 141 LDEALAWVEYCNGTRDTYYANLRRKNGREEPYNIKYWALGNEVWG 185
>sp|Q4WTB3|ABFC_ASPFU Probable alpha-N-arabinofuranosidase C OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=abfC PE=3 SV=2
Length = 505
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 40 LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNE 81
L EAL +E+ ++ + ++R G +P++++Y A+GNE
Sbjct: 141 LDEALAWVEYCNGTKDTYYANLRRKNGREEPYNIKYWALGNE 182
>sp|B0XQB2|ABFC_ASPFC Probable alpha-N-arabinofuranosidase C OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=abfC PE=3
SV=2
Length = 505
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 40 LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNE 81
L EAL +E+ ++ + ++R G +P++++Y A+GNE
Sbjct: 141 LDEALAWVEYCNGTKDTYYANLRRKNGREEPYNIKYWALGNE 182
>sp|P94552|ABF2_BACSU Alpha-N-arabinofuranosidase 2 OS=Bacillus subtilis (strain 168)
GN=xsa PE=3 SV=2
Length = 495
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 33 GLGYFEFLKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNED--CG 84
G G + + E ++ + F P S W R G +P+ L+Y +GNE+ CG
Sbjct: 127 GSGTVQEMSEWIEYMTFEEGTPMSDW---RKQNGREEPWKLKYFGVGNENWGCG 177
>sp|Q5BDV3|ABFC_EMENI Alpha-N-arabinofuranosidase C OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=abfC
PE=2 SV=1
Length = 504
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 27/45 (60%)
Query: 40 LKEALDSIEFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNEDCG 84
L EAL +++ ++ + ++R G +P++++Y A+GNE G
Sbjct: 141 LDEALAWVDYCNGTRDTYYANLRRKNGREEPYNVKYWALGNEVWG 185
>sp|Q59219|ABF2_BACOV Alpha-N-arabinofuranosidase 2 OS=Bacteroides ovatus GN=asdII PE=3
SV=1
Length = 514
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 24/97 (24%)
Query: 12 IRPWEDRPGHFGDIWM-YWTDDGLGYFEFL---------------------KEALDSIEF 49
I P E+RP + W D+ G EFL +E +E+
Sbjct: 104 IGPKENRPKMVNNNWGGTIEDNSFGTHEFLNLCEMLGCEPYVSGNVGSGTVEELAKWVEY 163
Query: 50 ARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNED--CG 84
SD +S ++R G + L+Y+ +GNE CG
Sbjct: 164 MTSDGDSPMANLRRKNGRDKAWKLKYLGVGNESWGCG 200
>sp|P94531|ABFA_BACSU Alpha-N-arabinofuranosidase 1 OS=Bacillus subtilis (strain 168)
GN=abfA PE=2 SV=2
Length = 500
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 21/94 (22%)
Query: 9 EASIRPWEDRPGHFGDIWMYWTDDGLGYFEFLK---------------------EALDSI 47
E + P E+RP W + +G EFL A + +
Sbjct: 80 EDGVGPVENRPRRLDLAWQTTETNEVGTNEFLSWAKKVNTEVNMAVNLGTRGIDAARNLV 139
Query: 48 EFARSDPNSTWGSVRAAMGHPDPFDLRYVAIGNE 81
E+ S W +R + G+ P+ ++ +GNE
Sbjct: 140 EYCNHPKGSYWSDLRRSHGYEQPYGIKTWCLGNE 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.142 0.469
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,199,187
Number of Sequences: 539616
Number of extensions: 1755707
Number of successful extensions: 2949
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2914
Number of HSP's gapped (non-prelim): 29
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)