Your job contains 1 sequence.
>045218
MDSTPNSSSCWSNIVKTQPPQSAATQTKTVPAAEILAQSCNSTEGIAVAVVDANAIIQGA
HNLTNFADKFVTVPEVLAEIRDPVSRNRLNFIPFSIDSMEPSPDSLNKVIKFARATGDLQ
TLSDVDLKLIALTCTLETQMHGTKHLRDAPPPLHTVNVKRLPEKDLPGWGSNVANLEEWE
ALDNDNADKLNTNSRILPLRDLNLNVIAGDYHSENGSVESQGGGNSENQEDGEHGLRRPR
RYLPKKIEVNIEGKKMVAAGIDASQGQVEDDAADWMPAVSRSTHRRYVRRKARREYYDSL
TDKDSQQEKEMGDDSNNVDESGNLEQQLHLGSEEARDTNGTSEESEITEKSGSEELSSIL
NQMRLEEDSLKALPEGNEVDICSTTHDSDISPVVEATSDVNGNST
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045218
(405 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2163071 - symbol:NOB1 species:3702 "Arabidopsi... 900 3.1e-90 1
FB|FBgn0030177 - symbol:CG2972 species:7227 "Drosophila m... 214 7.1e-17 2
POMBASE|SPAC1486.09 - symbol:SPAC1486.09 "ribosome biogen... 180 3.7e-11 1
UNIPROTKB|G4MQ79 - symbol:MGG_09254 "20S-pre-rRNA D-site ... 164 1.9e-10 2
RGD|735222 - symbol:Nob1 "NIN1/RPN12 binding protein 1 ho... 168 9.6e-10 1
UNIPROTKB|Q9ULX3 - symbol:NOB1 "RNA-binding protein NOB1"... 168 9.7e-10 1
MGI|MGI:1914869 - symbol:Nob1 "NIN1/RPN12 binding protein... 166 1.5e-09 1
WB|WBGene00021843 - symbol:Y54E10BR.4 species:6239 "Caeno... 165 1.6e-09 1
UNIPROTKB|Q3T042 - symbol:NOB1 "RNA-binding protein NOB1"... 165 2.1e-09 1
ASPGD|ASPL0000014547 - symbol:AN8253 species:162425 "Emer... 150 5.0e-08 2
SGD|S000005582 - symbol:NOB1 "Protein involved in proteas... 133 6.2e-07 2
CGD|CAL0000302 - symbol:HBR3 species:5476 "Candida albica... 140 1.7e-06 1
>TAIR|locus:2163071 [details] [associations]
symbol:NOB1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006606 "protein import
into nucleus" evidence=RCA] [GO:0000469 "cleavage involved in rRNA
processing" evidence=IDA] [GO:0004521 "endoribonuclease activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009555 "pollen development"
evidence=IMP] EMBL:CP002688 EMBL:AB010072 KO:K11883
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY IPI:IPI00524371 RefSeq:NP_198935.1
UniGene:At.51074 ProteinModelPortal:Q9FLL1 SMR:Q9FLL1 STRING:Q9FLL1
PRIDE:Q9FLL1 EnsemblPlants:AT5G41190.1 GeneID:834121
KEGG:ath:AT5G41190 TAIR:At5g41190 InParanoid:Q9FLL1
PhylomeDB:Q9FLL1 ProtClustDB:CLSN2686224 Genevestigator:Q9FLL1
Uniprot:Q9FLL1
Length = 602
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 201/391 (51%), Positives = 258/391 (65%)
Query: 5 PNSSSCWSNIVKTQPPQSAATQTKTVPAAEI-LAQSCNSTEGXXXXXXXXXXXXQGAHNL 63
P +S WS+IVK PP S PAA + + +C ST+G +G +L
Sbjct: 3 PKPTSMWSSIVKKDPP-SKPPVNDGAPAAILGMVGNCKSTKGISIAVVDANAIIEGRQSL 61
Query: 64 TNFADKFVTVPEVLAEIRDPVSRNRLNFIPFSIDSMEPSPDSLNKVIKFARATGDLQTLS 123
TNFADKFVTVPEVL+EIRDP SR RL FIPF+ID+MEPSP+SL+KVIKFARATGDLQ+LS
Sbjct: 62 TNFADKFVTVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARATGDLQSLS 121
Query: 124 DVDLKLIALTCTLETQMHGTKHLRDAPPPLHTVNVKRLPEKDLPGWGSNVANLEEWEALD 183
DVDLKLIAL+ TLE Q++GTK+LRD PPP+ TV VKRLPEKDLPGWGSNVANLEEWEAL+
Sbjct: 122 DVDLKLIALSYTLEAQVYGTKNLRDVPPPIQTVRVKRLPEKDLPGWGSNVANLEEWEALE 181
Query: 184 NDNADKLNTNSRILPLRDLNLNVIAGDYHSENGSVESQGGGNSEN-QEDGEHGLRRPRRY 242
N+ +K N NS+ILPL+DLN+N+IA D SE GSV S ++EN +ED + G ++ RRY
Sbjct: 182 NETEEKSNANSKILPLKDLNMNIIASDNVSEVGSVVS----HTENHEEDVQEGGKKHRRY 237
Query: 243 LPKKIEVNIEGKKMVAAGIDASQGQVEDD--AADWMPAVSRSTHXXXXXXXXXXXXXDSL 300
PKK E+ +EGK MV G+DASQGQ +DD A+DW PAVSRSTH ++L
Sbjct: 238 PPKKTEIKLEGK-MVVEGVDASQGQYDDDDDASDWRPAVSRSTHSKYLRRKARWEHYNAL 296
Query: 301 TDKDSQQEKEMGDDSNNVDESGNLEQQLHLGSEEARDTNGTSEE-SEITEKSGSEELSSI 359
+++ Q+++E D + + E+ + H A+D+ E+ S I + EE S
Sbjct: 297 AEQEIQKDQE-ADKARHTKEAN----ETH-----AKDSGKNGEDISSILKDMRLEEESLR 346
Query: 360 LNQMRLEEDSLKALPEGNEVDICSTTHDSDI 390
Q EE + +A E DI HD ++
Sbjct: 347 ALQEETEETNAEATLINGEDDI---DHDIEV 374
>FB|FBgn0030177 [details] [associations]
symbol:CG2972 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] GO:GO:0022008
EMBL:AE014298 eggNOG:COG1439 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 OMA:KEPLPEY
GeneTree:ENSGT00390000015857 EMBL:AY119594 RefSeq:NP_572603.1
UniGene:Dm.11186 SMR:Q9W2Y4 IntAct:Q9W2Y4 MINT:MINT-874469
STRING:Q9W2Y4 EnsemblMetazoa:FBtr0071430 GeneID:31943
KEGG:dme:Dmel_CG2972 UCSC:CG2972-RA FlyBase:FBgn0030177
InParanoid:Q9W2Y4 OrthoDB:EOG42548K GenomeRNAi:31943 NextBio:776063
Uniprot:Q9W2Y4
Length = 472
Score = 214 (80.4 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 51/133 (38%), Positives = 74/133 (55%)
Query: 63 LTNFADKFVTVPEVLAEIRDPVSRNRLNFIPFSIDSMEPSPDSLNKVIKFARATGDLQTL 122
L +A++ +TVP+V+AE+R+ RL +PF + EP P+S+ ++FA+ TGD +L
Sbjct: 24 LNEYAEQVLTVPDVVAEVRNKRQIRRLCVLPFDLQVREPRPESIKHCVEFAKKTGDYASL 83
Query: 123 SDVDLKLIALTCTLETQMHGTKHLRDAPPPLHTVNVKRLPE-------KDLPGWGSNVAN 175
S +DLK+I+LT LE GT HLR P T+ K PE K L GW +
Sbjct: 84 SGIDLKVISLTYELEADNVGTDHLRQEPVMAQTIASKDKPEEMQDANNKRLVGW--YMPE 141
Query: 176 LEEWEALDNDNAD 188
EE E D++ D
Sbjct: 142 GEEEEEEDSEEED 154
Score = 58 (25.5 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 30/111 (27%), Positives = 46/111 (41%)
Query: 298 DSLTDKD-SQQEKEMGDDSNNVDESGN-----LEQQLHLGSEEARDTNGTSEESEITEKS 351
DS + D SQ+E + D +ES + +E QL G E EE + E S
Sbjct: 149 DSEEEDDYSQEEDDAEGDEQEANESPDTVKAAIEAQL-AGKEPFASETIEKEEDQDQEPS 207
Query: 352 GSEELSSILNQMRLEEDSLKALPEGNEVDICSTTH-DSDISPVVEATSDVN 401
EEL + Q++ S + E +E+ + D ++S EA N
Sbjct: 208 -QEELDKLFEQLKCAP-SAEEEKELSELLVSQPAEVDEEVSEPQEAKQSQN 256
Score = 51 (23.0 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 308 EKEMGDDSNNVDESGNLEQQLHLGSEEARDTNGTSEESEITEKSGSEELSSILNQMRLEE 367
E+E +DS D+ E +EA ++ T + + + +G E +S + EE
Sbjct: 143 EEEEEEDSEEEDDYSQEEDDAEGDEQEANESPDTVKAAIEAQLAGKEPFAS--ETIEKEE 200
Query: 368 DSLKALPEGNEVD 380
D + P E+D
Sbjct: 201 DQDQE-PSQEELD 212
>POMBASE|SPAC1486.09 [details] [associations]
symbol:SPAC1486.09 "ribosome biogenesis protein Nob1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0004521 "endoribonuclease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030688 "preribosome, small subunit precursor" evidence=ISO]
[GO:0042274 "ribosomal small subunit biogenesis" evidence=ISO]
[GO:0043248 "proteasome assembly" evidence=ISO] [GO:0046872 "metal
ion binding" evidence=IEA] PomBase:SPAC1486.09 InterPro:IPR006596
GO:GO:0005829 GO:GO:0005634 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003723 GO:GO:0043248
GO:GO:0004521 GO:GO:0042274 SMART:SM00670 GO:GO:0030688
eggNOG:COG1439 HOGENOM:HOG000159692 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 PIR:T50078
RefSeq:NP_594097.1 HSSP:Q8BW10 ProteinModelPortal:Q9UTK0
STRING:Q9UTK0 EnsemblFungi:SPAC1486.09.1 GeneID:2541448
KEGG:spo:SPAC1486.09 OMA:TTSVMTK OrthoDB:EOG4CRQ7R NextBio:20802550
Uniprot:Q9UTK0
Length = 388
Score = 180 (68.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 58/200 (29%), Positives = 87/200 (43%)
Query: 63 LTNFADKFVTVPEVLAEIRDPVSRNRLNFIPFSIDSMEPSPDSLNKVIKFARATGDLQTL 122
L N A+ F T+P V+AEIRD SR + P P+ + KV +FA+ TGD +L
Sbjct: 22 LRNSAESFYTIPRVIAEIRDETSRKNFELWGDQVIQRVPKPEFIKKVSEFAKQTGDYSSL 81
Query: 123 SDVDLKLIALTCTLETQMHGTK-HLRDAPPPLHTVNVKRLPEKDLPGWGSNVANLEEWEA 181
S D++++ALT LE + +G LR P H +N K + S + +
Sbjct: 82 SVTDIQILALTYELEVEFNGGDWRLRKYPGQKH-INGKPPSNSNSTEDASKPTSSDTASV 140
Query: 182 LDNDNADKLNTNSRILPLRDLNLNVIAGDYHSENGSVESQGGGNSE---NQEDGEH-GLR 237
+ +N+D + + +L HS N N E N+ED E G
Sbjct: 141 KETENSDPKSAENEVLEGETTQ--------HSNNKEAHPNTEENKEQEDNEEDDEDDGWI 192
Query: 238 RPRRYLPKKIEVNIEGKKMV 257
P KK E + G+ +V
Sbjct: 193 TPSNIRKKKAEDGV-GESLV 211
>UNIPROTKB|G4MQ79 [details] [associations]
symbol:MGG_09254 "20S-pre-rRNA D-site endonuclease NOB1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006596 GO:GO:0004519 EMBL:CM001231
SMART:SM00670 KO:K11883 InterPro:IPR017117 InterPro:IPR014881
Pfam:PF08772 PIRSF:PIRSF037125 RefSeq:XP_003709884.1
ProteinModelPortal:G4MQ79 EnsemblFungi:MGG_09254T0 GeneID:2680190
KEGG:mgr:MGG_09254 Uniprot:G4MQ79
Length = 467
Score = 164 (62.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 39/87 (44%), Positives = 53/87 (60%)
Query: 67 ADKFVTVPEVLAEIRDPVSRNRLN--FIPFSIDSMEPSPDSLNKVIKFARATGDLQTLSD 124
A++ T+P VL EIRD +R R+N +PF + P P+S+ V FAR TGDL+ LS
Sbjct: 69 AEELYTIPAVLEEIRDEATRTRINNTLLPF-LKLRSPKPESIKFVSDFARRTGDLEVLSR 127
Query: 125 VDLKLIALTCTLETQMH-GTKHLRDAP 150
D+ LIALT LE + + G LR+ P
Sbjct: 128 PDIALIALTYELEIERNNGDWRLRNTP 154
Score = 53 (23.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 150 PPPLH-TVNVKR-LPEKDLPGWGSNVANLEEWEALDNDNADKLNTNSRILPLRDLNLNVI 207
P P+H T + K+ + GWG ++ E+ + D+ R L D ++
Sbjct: 383 PKPVHGTASGKKTVSGGGKNGWGKDLLLAEDQKEYQRKVDDERRARVRDLMDEDYLPGIL 442
Query: 208 AGDYHSENGSVESQGGGN 225
G+ NG ++ G N
Sbjct: 443 TGERAGGNGRIKVGAGRN 460
Score = 38 (18.4 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 243 LPKKIEVNIEGKKMVAAG 260
+PK + GKK V+ G
Sbjct: 382 IPKPVHGTASGKKTVSGG 399
Score = 37 (18.1 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 299 SLTDKDSQQEKEMGDDSNNVDESGNLEQQLHLGSEEARDTNGTSEESEI 347
S T+ DS E +DS + D G ++ +A+D + E I
Sbjct: 235 SKTEPDSVTEVVDEEDSASDDGDGEWITPSNIKKHKAKDNPTRAPEQPI 283
>RGD|735222 [details] [associations]
symbol:Nob1 "NIN1/RPN12 binding protein 1 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006596 RGD:735222 GO:GO:0005634
GO:GO:0046872 SMART:SM00670 CTD:28987 eggNOG:COG1439
HOGENOM:HOG000159692 HOVERGEN:HBG057385 KO:K11883 OrthoDB:EOG4S4PGJ
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY GeneTree:ENSGT00390000015857
EMBL:AY341886 EMBL:BC126076 IPI:IPI00396864 RefSeq:NP_954517.1
UniGene:Rn.102586 ProteinModelPortal:Q6VEU1 SMR:Q6VEU1
STRING:Q6VEU1 Ensembl:ENSRNOT00000034386 GeneID:291996
KEGG:rno:291996 UCSC:RGD:735222 InParanoid:Q6VEU1 NextBio:633580
ArrayExpress:Q6VEU1 Genevestigator:Q6VEU1
GermOnline:ENSRNOG00000021890 Uniprot:Q6VEU1
Length = 410
Score = 168 (64.2 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 50/184 (27%), Positives = 87/184 (47%)
Query: 63 LTNFADKFVTVPEVLAEIRDPVSRNRLNFIPFSIDSMEPSPDSLNKVIKFARATGDLQTL 122
L + T+ EV+ EIRD +R RL +P+ + EP P+ + V +F++ TGD +L
Sbjct: 20 LQDIGKNIYTIREVVREIRDKATRRRLAVLPYELRFKEPFPEYVRLVTEFSKKTGDYPSL 79
Query: 123 SDVDLKLIALTCTLETQMHGTKHLRDAPPPLHTVNVKRLPEKDLPGWGSNVANLEE--WE 180
S D++++ALT LE + G HL+ P + + + PE L G ++ + + E
Sbjct: 80 SATDIQVLALTYQLEAEFVGVSHLKKEPEKVKVSSSIQHPETPLHISGFHLPSKSKALQE 139
Query: 181 ALDN----DNADKLNTNSRI-----LPLRDLNLNVIAGDYHSENGSVESQGGGNSENQED 231
+D+ D ++ L +S + LP D L + D E E + E ++
Sbjct: 140 TVDHGPPADGSENLEFSSFMFWRNPLPNIDHELQQLLIDGREEEEEEEEEEEEEDELEDS 199
Query: 232 GEHG 235
+ G
Sbjct: 200 DDDG 203
>UNIPROTKB|Q9ULX3 [details] [associations]
symbol:NOB1 "RNA-binding protein NOB1" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006596 GO:GO:0005634
GO:GO:0046872 SMART:SM00670 CleanEx:HS_ART4 CTD:28987
eggNOG:COG1439 HOGENOM:HOG000159692 HOVERGEN:HBG057385 KO:K11883
OrthoDB:EOG4S4PGJ InterPro:IPR017117 InterPro:IPR014881
Pfam:PF08772 PIRSF:PIRSF037125 EMBL:AB026125 EMBL:AY487344
EMBL:AK001028 EMBL:BC000050 EMBL:BC064630 EMBL:AF190161
IPI:IPI00022373 PIR:A61382 RefSeq:NP_054781.1 UniGene:Hs.271695
ProteinModelPortal:Q9ULX3 SMR:Q9ULX3 IntAct:Q9ULX3 STRING:Q9ULX3
DMDM:74753398 PaxDb:Q9ULX3 PRIDE:Q9ULX3 DNASU:28987
Ensembl:ENST00000268802 GeneID:28987 KEGG:hsa:28987 UCSC:uc002exs.3
GeneCards:GC16M069775 HGNC:HGNC:29540 HPA:HPA049430 MIM:613586
neXtProt:NX_Q9ULX3 PharmGKB:PA143485585 InParanoid:Q9ULX3
OMA:KEPLPEY GenomeRNAi:28987 NextBio:51895 Bgee:Q9ULX3
CleanEx:HS_NOB1 Genevestigator:Q9ULX3 GermOnline:ENSG00000141101
Uniprot:Q9ULX3
Length = 412
Score = 168 (64.2 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 35/104 (33%), Positives = 57/104 (54%)
Query: 63 LTNFADKFVTVPEVLAEIRDPVSRNRLNFIPFSIDSMEPSPDSLNKVIKFARATGDLQTL 122
L + T+ EV+ EIRD +R RL +P+ + EP P+ + V +F++ TGD +L
Sbjct: 20 LQDIGKNIYTIREVVTEIRDKATRRRLAVLPYELRFKEPLPEYVRLVTEFSKKTGDYPSL 79
Query: 123 SDVDLKLIALTCTLETQMHGTKHLRDAPPPLHTVNVKRLPEKDL 166
S D++++ALT LE + G HL+ P + + + PE L
Sbjct: 80 SATDIQVLALTYQLEAEFVGVSHLKQEPQKVKVSSSIQHPETPL 123
>MGI|MGI:1914869 [details] [associations]
symbol:Nob1 "NIN1/RPN12 binding protein 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISA] [GO:0005730 "nucleolus" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISA] [GO:0030490 "maturation of SSU-rRNA"
evidence=ISA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
MGI:MGI:1914869 InterPro:IPR006596 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0030490 SMART:SM00670 CTD:28987 eggNOG:COG1439
HOGENOM:HOG000159692 HOVERGEN:HBG057385 KO:K11883 OrthoDB:EOG4S4PGJ
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY EMBL:AK075755 EMBL:AK021194
EMBL:BC054835 EMBL:BC103793 IPI:IPI00225974 RefSeq:NP_080553.1
UniGene:Mm.334793 PDB:2CON PDBsum:2CON ProteinModelPortal:Q8BW10
SMR:Q8BW10 IntAct:Q8BW10 STRING:Q8BW10 PhosphoSite:Q8BW10
PaxDb:Q8BW10 PRIDE:Q8BW10 Ensembl:ENSMUST00000003946 GeneID:67619
KEGG:mmu:67619 GeneTree:ENSGT00390000015857 InParanoid:Q8BW10
ChiTaRS:NOB1 EvolutionaryTrace:Q8BW10 NextBio:325057 Bgee:Q8BW10
Genevestigator:Q8BW10 GermOnline:ENSMUSG00000003848 Uniprot:Q8BW10
Length = 403
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 63 LTNFADKFVTVPEVLAEIRDPVSRNRLNFIPFSIDSMEPSPDSLNKVIKFARATGDLQTL 122
L + T+ EV+ EIRD +R RL +P+ + EP P+ + V +F++ TGD +L
Sbjct: 20 LQDIGKNIYTIREVVREIRDKATRRRLAVLPYQLRFKEPLPEYVRLVTEFSKKTGDYPSL 79
Query: 123 SDVDLKLIALTCTLETQMHGTKHLRDAPPPLHTVNVKRLPEKDLPGWGSNVANLEE--WE 180
S D++++ALT LE + G HL+ P + + PE L G ++ + + E
Sbjct: 80 SATDIQVLALTYQLEAEFVGVSHLKKEPEKAKVSSSIQHPETALHISGFHLPSKSKPLQE 139
Query: 181 ALDNDNA 187
A+D +A
Sbjct: 140 AVDRGHA 146
>WB|WBGene00021843 [details] [associations]
symbol:Y54E10BR.4 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
GO:GO:0008340 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0071688 GO:GO:0040035 eggNOG:COG1439
HOGENOM:HOG000159692 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125
GeneTree:ENSGT00390000015857 OMA:TTSVMTK EMBL:FO081636
RefSeq:NP_491090.1 ProteinModelPortal:Q9N3D3 SMR:Q9N3D3
STRING:Q9N3D3 PaxDb:Q9N3D3 EnsemblMetazoa:Y54E10BR.4 GeneID:171874
KEGG:cel:CELE_Y54E10BR.4 UCSC:Y54E10BR.4 CTD:171874
WormBase:Y54E10BR.4 InParanoid:Q9N3D3 NextBio:873055 Uniprot:Q9N3D3
Length = 364
Score = 165 (63.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 40/128 (31%), Positives = 65/128 (50%)
Query: 62 NLTNFADKFVTVPEVLAEIRDPVSRNRLNFIPFSIDSMEPSPDSLNKVIKFARATGDLQT 121
NL AD + P++L E+R +R N +PF + EP+ +L VI ++ TGD Q+
Sbjct: 23 NLHALADHYYAPPQILDELRSSAARKLWNTLPFEVTLREPTQTALRAVIDASKTTGDFQS 82
Query: 122 LSDVDLKLIALTCTLETQMHGTKHLRDAPPPLHTVNVKRLPEK-DLPGWGSNVANLEEWE 180
LS VD+K+IALT L Q + + N++ L K + G N + +E E
Sbjct: 83 LSMVDIKMIALTYDLHRQYVAENDVAETTEDDEKKNIEDLSAKVEQVTVGENTEDTKEEE 142
Query: 181 ALDNDNAD 188
+N+ ++
Sbjct: 143 IEENEESE 150
>UNIPROTKB|Q3T042 [details] [associations]
symbol:NOB1 "RNA-binding protein NOB1" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR006596 GO:GO:0005634
GO:GO:0046872 SMART:SM00670 EMBL:AY336977 EMBL:BC102577
IPI:IPI00690132 RefSeq:NP_898906.1 UniGene:Bt.49199
ProteinModelPortal:Q3T042 SMR:Q3T042 STRING:Q3T042 PRIDE:Q3T042
GeneID:360191 KEGG:bta:360191 CTD:28987 eggNOG:COG1439
HOGENOM:HOG000159692 HOVERGEN:HBG057385 InParanoid:Q3T042 KO:K11883
OrthoDB:EOG4S4PGJ NextBio:20812791 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 Uniprot:Q3T042
Length = 413
Score = 165 (63.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 34/104 (32%), Positives = 57/104 (54%)
Query: 63 LTNFADKFVTVPEVLAEIRDPVSRNRLNFIPFSIDSMEPSPDSLNKVIKFARATGDLQTL 122
L + T+ V++EIRD +R RL +P+ + EP P+ + V +F++ TGD +L
Sbjct: 20 LQDIGKNIYTIRNVISEIRDKATRRRLAVLPYELRFKEPFPEYVRLVTEFSKKTGDYPSL 79
Query: 123 SDVDLKLIALTCTLETQMHGTKHLRDAPPPLHTVNVKRLPEKDL 166
S D++++ALT LE + G HL+ P + + + PE L
Sbjct: 80 SATDIQVLALTYQLEAEFVGVSHLKQEPEKVKVSSSIQHPETPL 123
>ASPGD|ASPL0000014547 [details] [associations]
symbol:AN8253 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006596 EMBL:BN001302
GO:GO:0000502 EMBL:AACD01000145 SMART:SM00670 eggNOG:COG1439
HOGENOM:HOG000159692 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 OMA:KEPLPEY
OrthoDB:EOG4CRQ7R RefSeq:XP_681522.1 ProteinModelPortal:Q5ATX7
STRING:Q5ATX7 EnsemblFungi:CADANIAT00004311 GeneID:2869144
KEGG:ani:AN8253.2 Uniprot:Q5ATX7
Length = 431
Score = 150 (57.9 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 36/91 (39%), Positives = 53/91 (58%)
Query: 63 LTNFADKFVTVPEVLAEIRDPVSRNRLN--FIPFSIDSMEPSPDSLNKVIKFARATGDLQ 120
L + ++ VT P V+AEIRDP +R RL ++PF + PSP S + +FA+ TGD
Sbjct: 30 LLSRCEELVTTPSVVAEIRDPDARQRLETMYLPF-LKQRTPSPKSFAVLSEFAKKTGDRA 88
Query: 121 TLSDVDLKLIALTCTLETQMHGTK-HLRDAP 150
LS D++++AL LE + +G LR P
Sbjct: 89 VLSRTDIEVLALAYELECERNGGDWRLRSVP 119
Score = 44 (20.5 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 340 GTSEESEITEKSGSEELSSILNQMRLE---EDSLKALPEGNEVDICSTTHDSDIS 391
GT+ EI E +E++ L LE ++S P G E + +D++
Sbjct: 143 GTATTDEIAEDPAVKEVTEDLKATTLETKEDESNTEHPRGAEPEAAEDNQAADLA 197
Score = 40 (19.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 15/80 (18%), Positives = 30/80 (37%)
Query: 302 DKDSQQEKEMGDDSNNVDESGNLEQQLHLGSEEARDTNGTSEESEITEKSGSEELSSILN 361
+ +S E G + ++ N L + + D G E+ +E G E ++
Sbjct: 172 EDESNTEHPRGAEPEAAED--NQAADLAVQDSQDEDEAGEVEDGAASESDGGEWITPSNL 229
Query: 362 QMRLEEDSLKALPEGNEVDI 381
+ R D + +EV +
Sbjct: 230 KKRQARDEVGDATAASEVKV 249
>SGD|S000005582 [details] [associations]
symbol:NOB1 "Protein involved in proteasomal and 40S
ribosomal subunit biogenesis" species:4932 "Saccharomyces
cerevisiae" [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IDA;IPI] [GO:0070181 "SSU rRNA binding" evidence=IDA]
[GO:0043248 "proteasome assembly" evidence=IMP;IPI] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEP;IMP] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030688 "preribosome, small subunit
precursor" evidence=IDA] [GO:0090305 "nucleic acid phosphodiester
bond hydrolysis" evidence=IEA] [GO:0004521 "endoribonuclease
activity" evidence=IDA] [GO:0030490 "maturation of SSU-rRNA"
evidence=IDA] SGD:S000005582 InterPro:IPR006596 GO:GO:0005783
GO:GO:0005737 GO:GO:0005730 EMBL:BK006948 GO:GO:0046872
GO:GO:0043248 GO:GO:0004521 EMBL:Z70678 GO:GO:0070181 GO:GO:0000462
SMART:SM00670 GO:GO:0030688 eggNOG:COG1439 HOGENOM:HOG000159692
KO:K11883 InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY GeneTree:ENSGT00390000015857
HSSP:Q8BW10 OrthoDB:EOG4CRQ7R EMBL:Z74964 PIR:S66939
RefSeq:NP_014699.1 ProteinModelPortal:Q08444 SMR:Q08444
DIP:DIP-6440N IntAct:Q08444 MINT:MINT-621960 STRING:Q08444
PaxDb:Q08444 PeptideAtlas:Q08444 EnsemblFungi:YOR056C GeneID:854221
KEGG:sce:YOR056C CYGD:YOR056c NextBio:976086 Genevestigator:Q08444
Uniprot:Q08444
Length = 459
Score = 133 (51.9 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 34/89 (38%), Positives = 48/89 (53%)
Query: 65 NFADKFVTVPEVLAEIRDPVSRNRLNFIPF--SIDSMEPSPDSLNKVIKFARATGDLQTL 122
N+A F T P V EI+D +R L ++ + PS +S+ KV FA+ TGD L
Sbjct: 29 NYAQSFYTTPTVFQEIKDAQARKNLEIWQSLGTLKLVHPSENSIAKVSTFAKLTGDYSVL 88
Query: 123 SDVDLKLIALTCTLETQMH-GTKHLRDAP 150
S DL ++ALT LE +++ G LR P
Sbjct: 89 SANDLHILALTYELEIKLNNGDWRLRKKP 117
Score = 53 (23.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 25/109 (22%), Positives = 44/109 (40%)
Query: 300 LTDKDSQQEKEMGDDSNNVDESGNLEQQLHLGSEEARDTNGTSEESEITEKSGSEELSSI 359
LT+ + ++E G +Q+ + EAR+ + E E + EE S
Sbjct: 136 LTEDNKKEEDSESVPKKKNKRRGGKKQKAKREAREAREAENANLELESKAEEHVEEAGS- 194
Query: 360 LNQMRLEEDSLKALPEGNEVDICSTTHDSD-ISP--VVEATSDVNGNST 405
+ ++++K + NEV D D I+P + EA +G T
Sbjct: 195 -KEQICNDENIKESSDLNEV-FEDADDDGDWITPENLTEAIIKDSGEDT 241
>CGD|CAL0000302 [details] [associations]
symbol:HBR3 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030688 "preribosome, small subunit precursor" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IEA] [GO:0070181
"SSU rRNA binding" evidence=IEA] [GO:0043248 "proteasome assembly"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
CGD:CAL0000302 InterPro:IPR006596 EMBL:AACQ01000148
EMBL:AACQ01000147 SMART:SM00670 eggNOG:COG1439 KO:K11883
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 RefSeq:XP_712719.1 RefSeq:XP_712756.1
ProteinModelPortal:Q59SR4 STRING:Q59SR4 GeneID:3645652
GeneID:3645689 KEGG:cal:CaO19.14217 KEGG:cal:CaO19.6955
Uniprot:Q59SR4
Length = 466
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 58 QGAHNLTNFADKFVTVPEVLAEIRDPVSRNRLNFIPFSIDSMEPSPDSLNKVIKFARATG 117
Q A L +A + T P V +E++D +R +L S+ +P + +++V+KFA+ TG
Sbjct: 20 QPATTLQQYATAYYTTPGVHSELKDEYARQQLAIWGDSLKIKQPKQEYIDRVVKFAKLTG 79
Query: 118 DLQTLSDVDLKLIALTCTLETQMHGTKHLRDAP 150
D LS DL ++AL LE +G +LR P
Sbjct: 80 DYSVLSVNDLHIVALAYELECLNNGEDNLRSFP 112
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.306 0.125 0.351 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 405 380 0.00090 117 3 11 23 0.40 35
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 608 (65 KB)
Total size of DFA: 234 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.02u 0.11s 38.13t Elapsed: 00:00:01
Total cpu time: 38.02u 0.11s 38.13t Elapsed: 00:00:01
Start: Sat May 11 06:48:21 2013 End: Sat May 11 06:48:22 2013