Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>045228
IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG
LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG
DKSVFMFNALSEDEKKALIEKLEQQN

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045228
        (146 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2010499 - symbol:AT1G28140 "AT1G28140" species...   634  4.8e-62   1


>TAIR|locus:2010499 [details] [associations]
            symbol:AT1G28140 "AT1G28140" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] EMBL:CP002684 GO:GO:0009507 EMBL:AC021044
            EMBL:AY054483 EMBL:AY093287 IPI:IPI00540331 PIR:C86407
            RefSeq:NP_564300.1 UniGene:At.22956 IntAct:Q9FZ88 STRING:Q9FZ88
            PRIDE:Q9FZ88 EnsemblPlants:AT1G28140.1 GeneID:839708
            KEGG:ath:AT1G28140 TAIR:At1g28140 InParanoid:Q9FZ88 OMA:IGDKSVF
            PhylomeDB:Q9FZ88 ProtClustDB:CLSN2688046 ArrayExpress:Q9FZ88
            Genevestigator:Q9FZ88 InterPro:IPR019275 Pfam:PF10063
            Uniprot:Q9FZ88
        Length = 280

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 119/145 (82%), Positives = 134/145 (92%)

Query:     1 IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
             IKRTLQALW LG +GS ATY ALARPAG+NLV YV+DHP+AVWFVG LFA+LTGLVFKEG
Sbjct:   133 IKRTLQALWALGFVGSFATYAALARPAGDNLVHYVVDHPSAVWFVGPLFASLTGLVFKEG 192

Query:    61 LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
             LCYGKLEAG+LTFIIPSVLLGHLSGLM+D VKL LLG+WM LF++FAGRKFTQPIKDDIG
Sbjct:   193 LCYGKLEAGLLTFIIPSVLLGHLSGLMNDEVKLVLLGTWMALFLVFAGRKFTQPIKDDIG 252

Query:   121 DKSVFMFNALSEDEKKALIEKLEQQ 145
             DKSVF F +LS+DEKKA++EKLEQ+
Sbjct:   253 DKSVFTFMSLSDDEKKAIVEKLEQE 277


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.141   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      146       146   0.00079  103 3  11 22  0.41    31
                                                     30  0.49    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  585 (62 KB)
  Total size of DFA:  132 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.95u 0.16s 14.11t   Elapsed:  00:00:00
  Total cpu time:  13.95u 0.16s 14.11t   Elapsed:  00:00:00
  Start:  Sat May 11 07:10:52 2013   End:  Sat May 11 07:10:52 2013

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