BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045228
         (146 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9M815|PCR8_ARATH Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana GN=PCR8
           PE=1 SV=2
          Length = 190

 Score = 34.7 bits (78), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 62  CYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFA 107
           C       +LT I+P V  G ++ +MD+G     LG++M L ++ A
Sbjct: 60  CQADQANAVLTTIVPCVTFGQIAEVMDEGEMTCPLGTFMYLLMMPA 105


>sp|A4W1F7|UVRB_STRS2 UvrABC system protein B OS=Streptococcus suis (strain 98HAH33)
           GN=uvrB PE=3 SV=1
          Length = 661

 Score = 32.3 bits (72), Expect = 0.96,   Method: Composition-based stats.
 Identities = 14/24 (58%), Positives = 20/24 (83%)

Query: 122 KSVFMFNALSEDEKKALIEKLEQQ 145
           + V  FNAL++DE+KA+I+KLE Q
Sbjct: 612 EEVVDFNALNKDERKAMIKKLEGQ 635


>sp|P0CM60|VAC8_CRYNJ Vacuolar protein 8 OS=Cryptococcus neoformans var. neoformans
          serotype D (strain JEC21 / ATCC MYA-565) GN=VAC8 PE=3
          SV=1
          Length = 630

 Score = 31.2 bits (69), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 25 RPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGL 61
          R A  +L+QY+ +  T  +F GS  AALT L F E +
Sbjct: 26 REAVADLLQYLENRSTTNFFAGSPLAALTTLSFSENV 62


>sp|P0CM61|VAC8_CRYNB Vacuolar protein 8 OS=Cryptococcus neoformans var. neoformans
          serotype D (strain B-3501A) GN=VAC8 PE=3 SV=1
          Length = 630

 Score = 31.2 bits (69), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 25 RPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGL 61
          R A  +L+QY+ +  T  +F GS  AALT L F E +
Sbjct: 26 REAVADLLQYLENRSTTNFFAGSPLAALTTLSFSENV 62


>sp|Q9LS44|PCR4_ARATH Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis thaliana GN=PCR4
           PE=3 SV=1
          Length = 184

 Score = 30.8 bits (68), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 13/50 (26%), Positives = 23/50 (46%)

Query: 62  CYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKF 111
           C    E  ++T + P V LG ++ ++D+G      G  +   + F G  F
Sbjct: 61  CMNDSENAVITCLAPCVTLGQIAEIVDEGATPCATGGLLYGMIFFIGVPF 110


>sp|Q9DBG5|PLIN3_MOUSE Perilipin-3 OS=Mus musculus GN=Plin3 PE=1 SV=1
          Length = 437

 Score = 30.8 bits (68), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 12  GVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALT 53
           GV+       A AR A +N V+YV  +  A+W VG     +T
Sbjct: 389 GVLAQTRERIARAREALDNTVEYVAQNTPAMWLVGPFAPGIT 430


>sp|B3R290|GUAA_CUPTR GMP synthase [glutamine-hydrolyzing] OS=Cupriavidus taiwanensis
           (strain R1 / LMG 19424) GN=guaA PE=3 SV=1
          Length = 539

 Score = 30.4 bits (67), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 12/107 (11%)

Query: 10  VLGVMGSLATYTALA---RPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGLCYGKL 66
           +LG+ G + +  A A   R  G+ L    +DH       G L      LV +  +  G+L
Sbjct: 226 ILGLSGGVDSSVAAALIHRAIGDQLTCVFVDH-------GLLRQDEGKLVME--MFVGRL 276

Query: 67  EAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQ 113
            A ++        LGHL+G+ D   K  ++G   V       RK T 
Sbjct: 277 HAKVVHVDASEQFLGHLAGVTDPEQKRKIIGREFVEVFQAEARKLTN 323


>sp|Q81DG8|PLSY1_BACCR Glycerol-3-phosphate acyltransferase 1 OS=Bacillus cereus (strain
           ATCC 14579 / DSM 31) GN=plsY1 PE=3 SV=1
          Length = 182

 Score = 29.3 bits (64), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 16/84 (19%)

Query: 33  QYVIDHPTAVWFVGSLFAALTGLVFKEGLCYGKLEAGILTFIIPSVLLGHLSGLM--DDG 90
           +Y+ + PT V    +L A + G ++   L  GK   GI TFI          GL+  D  
Sbjct: 75  KYLFEDPTFVML--TLLAVIIGHIYPV-LFKGKGGKGISTFI---------GGLIAFDYL 122

Query: 91  VKLSLLGSWMVLFVIFAGRKFTQP 114
           + L+LLG ++V ++IF G  FT+P
Sbjct: 123 IALTLLGIFIVFYLIFKG--FTKP 144


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.141    0.419 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,739,564
Number of Sequences: 539616
Number of extensions: 2197456
Number of successful extensions: 4588
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 4581
Number of HSP's gapped (non-prelim): 36
length of query: 146
length of database: 191,569,459
effective HSP length: 106
effective length of query: 40
effective length of database: 134,370,163
effective search space: 5374806520
effective search space used: 5374806520
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)