BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045234
(299 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis
thaliana GN=NERD PE=1 SV=3
Length = 1773
Score = 137 bits (346), Expect = 7e-32, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 98/194 (50%), Gaps = 11/194 (5%)
Query: 17 CFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCRKASKFYCFC 76
CF C GG+L LCD C K YHP CVD+DE+F K KW C WH C C K + + C+
Sbjct: 602 CFMCFDGGDLVLCDRRGCTKAYHPSCVDRDEAFFQTKGKWNCGWHLCSKCEKTATYLCYT 661
Query: 77 CPSAVCKTCLYDIQFALVKENKGFCNSCLELAWLIETKKD----VNYDGFDRSDAGERNR 132
C ++CK C D F ++ NKG C +C+E LIE K+ D D++
Sbjct: 662 CMFSLCKGCAKDAVFFCIRGNKGLCETCMETVKLIERKQQEKEPAQLDFNDKTSW----E 717
Query: 133 FYFKGYWQKIKEKESLTPENVISAYYLLKKGEMHKLVSNTFASYE---EEHNLSLCWNKK 189
+ FK YW +K + SL+PE + A LK E + T + + + + S KK
Sbjct: 718 YLFKDYWIDLKTQLSLSPEELDQAKRPLKGHETNASKQGTASETDYVTDGGSDSDSSPKK 777
Query: 190 RKRSNRKTSGKKEK 203
RK +R SG EK
Sbjct: 778 RKTRSRSKSGSAEK 791
>sp|Q9SD34|C3H44_ARATH Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis
thaliana GN=At3g51120 PE=2 SV=3
Length = 1292
Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats.
Identities = 59/145 (40%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Query: 17 CFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCRKASKFYCFC 76
CF C GG+L LCD C K YHP C+ +DE+F KW C WH CG C+KAS + C+
Sbjct: 113 CFICFDGGDLVLCDRRNCPKAYHPACIKRDEAFFRTTAKWNCGWHICGTCQKASSYMCYT 172
Query: 77 CPSAVCKTCLYDIQFALVKENKGFCNSCLELAWLIET-----KKDVNYDGFDRSDAGERN 131
C +VCK C+ D + +V+ N G C +C++ LIE + V D FD + E
Sbjct: 173 CTFSVCKRCIKDADYVIVRGNMGLCGTCIKPIMLIENIAQGDNEAVKVD-FDDKLSWE-- 229
Query: 132 RFYFKGYWQKIKEKESLTPENVISA 156
+ FK YW +KE+ SLT + + A
Sbjct: 230 -YLFKVYWLCLKEELSLTVDELTRA 253
>sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1 PE=1
SV=1
Length = 1365
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 13 SEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCRKASKF 72
SE CF+C GG+L LCD C K YH C+ + KW C WH C VC K S
Sbjct: 1238 SEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFG---KWECPWHHCDVCGKPSTS 1294
Query: 73 YCFCCPSAVCKTCLYDIQFALVKENKGFC 101
+C CP++ CK F+ + + +C
Sbjct: 1295 FCHLCPNSFCKEHQDGTAFSCTPDGRSYC 1323
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 11/72 (15%)
Query: 2 ARSKRLKKEEISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWH 61
AR + ++ WCF C GG L C++ C +HP+C++ + W CN
Sbjct: 819 ARKGKRHHAHVNVSWCFVCSKGGSLLCCES--CPAAFHPDCLNIE----MPDGSWFCN-- 870
Query: 62 FCGVCRKASKFY 73
CR K +
Sbjct: 871 ---DCRAGKKLH 879
>sp|Q8BVE8|NSD2_MOUSE Histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1 PE=1
SV=2
Length = 1365
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 13 SEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCRKASKF 72
SE CF+C GG+L LCD C K YH C+ + KW C WH C VC K S
Sbjct: 1238 SEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFG---KWECPWHHCDVCGKPSTS 1294
Query: 73 YCFCCPSAVCKTCLYDIQFALVKENKGFC 101
+C CP++ CK F ++ + +C
Sbjct: 1295 FCHLCPNSFCKEHQDGTAFRSTQDGQSYC 1323
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 11/72 (15%)
Query: 2 ARSKRLKKEEISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWH 61
AR + ++ WCF C GG L C+ C +HP+C++ W CN
Sbjct: 819 ARKGKRHHTHVNVSWCFVCSKGGSLLCCE--ACPAAFHPDCLN----IEMPDGSWFCN-- 870
Query: 62 FCGVCRKASKFY 73
CR K +
Sbjct: 871 ---DCRAGKKLH 879
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 63.2 bits (152), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 5 KRLKKEEIS---EIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWH 61
KR + E++ E CF C G+L C C KVYH +C++ + KW C WH
Sbjct: 2004 KRRSQGEVTKEREDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKR---PAGKWECPWH 2060
Query: 62 FCGVCRKASKFYCFCCPSAVCK 83
C VC K + +C CPS+ CK
Sbjct: 2061 QCDVCGKEAASFCEMCPSSFCK 2082
Score = 39.7 bits (91), Expect = 0.029, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 10 EEISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICN 59
E ++ WCF C GG L CD+ C +H EC++ D + W CN
Sbjct: 1601 EHVNVSWCFVCSEGGSLLCCDS--CPAAFHRECLNID----IPEGNWYCN 1644
Score = 38.9 bits (89), Expect = 0.048, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 17 CFKCKHGGE-LRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCRKAS 70
CF CK GE ++ C C K YH ECV K + + C H C C A+
Sbjct: 1491 CFVCKQSGEDVKRCLLPLCGKFYHEECVQKYPPTVTQNKGFRCPLHICITCHAAN 1545
Score = 38.5 bits (88), Expect = 0.054, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 42/123 (34%)
Query: 1 MARSKRLKKEE-----ISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTK 55
M+ SK+L+ E + E C C+ GEL LC+ +C +H EC+ E + K
Sbjct: 1423 MSASKKLQVERGGGAALKENVCQNCEKLGELLLCE-AQCCGAFHLECLGLPE---MPRGK 1478
Query: 56 WICN-----WHFCGVCRKA------------SKFY---C-------------FCCPSAVC 82
+ICN H C VC+++ KFY C F CP +C
Sbjct: 1479 FICNECHTGIHTCFVCKQSGEDVKRCLLPLCGKFYHEECVQKYPPTVTQNKGFRCPLHIC 1538
Query: 83 KTC 85
TC
Sbjct: 1539 ITC 1541
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 62.0 bits (149), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 17 CFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCRKASKFYCFC 76
CF C G+L C C KVYH +C++ + KW C WH C +C K + +C
Sbjct: 2121 CFSCGDAGQLVSCKKPGCPKVYHADCLNLTKR---PAGKWECPWHQCDICGKEAASFCEM 2177
Query: 77 CPSAVCK 83
CPS+ CK
Sbjct: 2178 CPSSFCK 2184
Score = 39.3 bits (90), Expect = 0.032, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 17 CFKCKHGGE-LRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCRKAS 70
CF CK GE ++ C C K YH ECV K + + C+ H C C A+
Sbjct: 1593 CFVCKQSGEDVKRCLLPLCGKFYHEECVQKYPPTVMQNKGFRCSLHICITCHAAN 1647
Score = 39.3 bits (90), Expect = 0.034, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 10 EEISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICN 59
E ++ WCF C GG L CD+ C +H EC++ D + W CN
Sbjct: 1703 EHVNVSWCFVCSEGGSLLCCDS--CPAAFHRECLNID----IPEGNWYCN 1746
Score = 36.6 bits (83), Expect = 0.26, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%)
Query: 1 MARSKRLKKEE-----ISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTK 55
M SK+++ E + E C C+ GEL LC+ +C +H EC+ E + K
Sbjct: 1525 MPASKKMQGERGGGAALKENVCQNCEKLGELLLCE-AQCCGAFHLECLGLTE---MPRGK 1580
Query: 56 WICN-----WHFCGVCRKASKFYCFC----CPSAVCKTCLYDIQFALVKENKGF 100
+ICN H C VC+++ + C C + C+ V +NKGF
Sbjct: 1581 FICNECRTGIHTCFVCKQSGEDVKRCLLPLCGKFYHEECVQKYP-PTVMQNKGF 1633
>sp|Q9BZ95|NSD3_HUMAN Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens GN=WHSC1L1
PE=1 SV=1
Length = 1437
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 3 RSKRLKKEEISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHF 62
R + + +++ E +CF+C GGEL +CD C K YH C++ + KW C WH
Sbjct: 1310 RKIKTEPKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYG---KWECPWHQ 1366
Query: 63 CGVCRKASKFYCFCCPSAVCK 83
C C A+ +C CP + CK
Sbjct: 1367 CDECSSAAVSFCEFCPHSFCK 1387
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 17 CFKCK-HGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCR------KA 69
CF CK G +++ C C K YH CV K + + + C H C C KA
Sbjct: 752 CFSCKVSGKDVKRCSVGACGKFYHEACVRKFPTAIFESKGFRCPQHCCSACSMEKDIHKA 811
Query: 70 SK---FYCFCCPSA 80
SK C CP A
Sbjct: 812 SKGRMMRCLRCPVA 825
>sp|Q6P2L6|NSD3_MOUSE Histone-lysine N-methyltransferase NSD3 OS=Mus musculus GN=Whsc1l1
PE=1 SV=2
Length = 1439
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 3 RSKRLKKEEISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHF 62
R + + + I E +CF+C GGEL +CD C K YH C++ + KW C WH
Sbjct: 1312 RKVKAEAKPIHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQ---PPHGKWECPWHR 1368
Query: 63 CGVCRKASKFYCFCCPSAVCKT 84
C C + +C CP + CK
Sbjct: 1369 CDECGSVAVSFCEFCPHSFCKA 1390
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Query: 11 EISEIWCFKCK-HGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCR-- 67
E + CF CK G +++ C + C K YH CV K + + + C H C C
Sbjct: 746 ETGQHPCFSCKVSGKDVKRCSVSVCGKFYHEACVRKFPTAIFESKGFRCPQHCCSSCSME 805
Query: 68 ----KASK---FYCFCCPSA 80
KASK C CP A
Sbjct: 806 KDIHKASKGRMMRCLRCPVA 825
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 40.0 bits (92), Expect = 0.020, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 8 KKEEISEIWCFKCKHGGELRLCDNTRCLKVYHPEC-VDKDESFLAAKTKWICNWHFCGVC 66
K+++ +E WC C++GGEL C+ +C KV+H C V +F + +WIC + C
Sbjct: 820 KEDDPNEDWCAVCQNGGELLCCE--KCPKVFHLSCHVPTLTNFPSG--EWICTF-----C 870
Query: 67 RKASK 71
R SK
Sbjct: 871 RDLSK 875
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 25/133 (18%)
Query: 2 ARSKRLKKEEISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKD--------------- 46
AR ++ EE + C C GEL LCD C + YH C+D++
Sbjct: 253 ARKEQGVVEENHQENCEVCNQDGELMLCDT--CTRAYHVACIDENMEQPPEGDWSCPHCE 310
Query: 47 ----ESFLAAKTKWICNWHFCGVCRKASK-FYCFCCPSAVCKTCLYDIQFALVKENKGFC 101
+ + + N +C +C++ S C CPS+ C+ D + E + C
Sbjct: 311 EHGPDVLIVEEEPAKANMDYCRICKETSNILLCDTCPSSYHAYCI-DPPLTEIPEGEWSC 369
Query: 102 NSCL--ELAWLIE 112
C+ E A IE
Sbjct: 370 PRCIIPEPAQRIE 382
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 39.3 bits (90), Expect = 0.032, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 8 KKEEISEIWCFKCKHGGELRLCDNTRCLKVYHPEC-VDKDESFLAAKTKWICNWHFCGVC 66
K+++ +E WC C++GGEL C+ +C KV+H C V +F + +WIC + C
Sbjct: 821 KEDDPNEDWCAVCQNGGELLCCE--KCPKVFHLTCHVPTLTNFPSG--EWICTF-----C 871
Query: 67 RKASK 71
R SK
Sbjct: 872 RDLSK 876
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 39.3 bits (90), Expect = 0.039, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 38/102 (37%), Gaps = 34/102 (33%)
Query: 16 WCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWIC--------NW------- 60
+C C+ GGE+ LCD C + YH C+D E A + KW C W
Sbjct: 345 YCEVCQQGGEIILCDT--CPRAYHLVCLDP-ELEKAPEGKWSCPHCEKEGIQWEPKDDDD 401
Query: 61 ---------------HFCGVCRKASKFYCF-CCPSAVCKTCL 86
FC VC+ + C CPS+ CL
Sbjct: 402 EEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCL 443
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 21/89 (23%)
Query: 16 WCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWIC----------------- 58
+C C+ GGE+ LCD C + YH C++ E + KW C
Sbjct: 379 YCEVCQQGGEIILCDT--CPRAYHLVCLEP-ELDEPPEGKWSCPHCEADGGAAEEEDDDE 435
Query: 59 NWHFCGVCRKASKFY-CFCCPSAVCKTCL 86
+ FC VC+ + C CPSA CL
Sbjct: 436 HQEFCRVCKDGGELLCCDSCPSAYHTFCL 464
>sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens GN=TRIM33 PE=1
SV=3
Length = 1127
Score = 38.1 bits (87), Expect = 0.084, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 13/70 (18%)
Query: 1 MARSKRL------KKEEISEIWCFKCKHGGELRLCDNTRCLKVYHPEC-VDKDESFLAAK 53
M RS R+ K ++ +E WC C++GG+L C+ +C KV+H C V SF +
Sbjct: 868 MHRSARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCE--KCPKVFHLTCHVPTLLSFPSG- 924
Query: 54 TKWICNWHFC 63
WIC FC
Sbjct: 925 -DWICT--FC 931
>sp|Q6E2N3|TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio GN=trim33 PE=2
SV=1
Length = 1163
Score = 38.1 bits (87), Expect = 0.086, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 8 KKEEISEIWCFKCKHGGELRLCDNTRCLKVYHPEC 42
K+++ +E WC C++GGEL CD+ C KV+H C
Sbjct: 915 KEDDPNEDWCAVCQNGGELLCCDH--CPKVFHITC 947
>sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus GN=Trim33 PE=1
SV=2
Length = 1142
Score = 38.1 bits (87), Expect = 0.087, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 13/70 (18%)
Query: 1 MARSKRL------KKEEISEIWCFKCKHGGELRLCDNTRCLKVYHPEC-VDKDESFLAAK 53
M RS R+ K ++ +E WC C++GG+L C+ +C KV+H C V SF +
Sbjct: 883 MHRSARIGGDGNSKDDDPNEDWCAVCQNGGDLLCCE--KCPKVFHLTCHVPTLLSFPSG- 939
Query: 54 TKWICNWHFC 63
WIC FC
Sbjct: 940 -DWICT--FC 946
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 37.7 bits (86), Expect = 0.11, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 38/108 (35%), Gaps = 40/108 (37%)
Query: 16 WCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWIC--------NW------- 60
+C C+ GGE+ LCD C + YH C+D D A + KW C W
Sbjct: 365 YCEVCQQGGEIILCDT--CPRAYHMVCLDPDME-KAPEGKWSCPHCEKEGIQWEAKEDNS 421
Query: 61 ---------------------HFCGVCRKASKFYCF-CCPSAVCKTCL 86
FC VC+ + C CPS+ CL
Sbjct: 422 EGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCL 469
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 37.7 bits (86), Expect = 0.11, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 38/108 (35%), Gaps = 40/108 (37%)
Query: 16 WCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWIC--------NW------- 60
+C C+ GGE+ LCD C + YH C+D D A + KW C W
Sbjct: 372 YCEVCQQGGEIILCDT--CPRAYHMVCLDPDME-KAPEGKWSCPHCEKEGIQWEAKEDNS 428
Query: 61 ---------------------HFCGVCRKASKFYCF-CCPSAVCKTCL 86
FC VC+ + C CPS+ CL
Sbjct: 429 EGEEILEEVGGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCL 476
>sp|Q55FD6|Y8158_DICDI PHD finger-containing protein DDB_G0268158 OS=Dictyostelium
discoideum GN=DDB_G0268158 PE=4 SV=1
Length = 688
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 13 SEIWCFKCKHGG----ELRLCDNTRCLKVYHPECVD--KDESFLAAKT-KWICNWHFCGV 65
S+ CF CK G +L C +C K YH +CV K + KT ++ C H+C V
Sbjct: 197 SQNSCFSCKKRGIIGIDLMKCKVHQCGKFYHYKCVADYKLAKLINTKTPRFNCPLHYCSV 256
Query: 66 CRKAS----KFYCFCCPSAVCKTCL 86
C + +CF CP+A C+
Sbjct: 257 CEVSGDGKQSVHCFRCPTAYHVICM 281
>sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=PHF21A PE=1 SV=1
Length = 680
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 11 EISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWIC 58
+I E +C C+ G+L +CD C +VYH +C+D + K WIC
Sbjct: 485 DIHEDFCSVCRKSGQLLMCDT--CSRVYHLDCLDPPLKTI-PKGMWIC 529
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%)
Query: 16 WCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWIC----------------- 58
+C +CK GEL LCD C + YH C+D++ + W C
Sbjct: 258 YCEECKQDGELLLCDT--CPRAYHTVCIDENME-EPPEGDWSCAHCIEHGPEVVKEEPAK 314
Query: 59 -NWHFCGVCRKASKFYCFCCPSAVCKTCLYDIQFALVKENKGFCNSC 104
N FC +C++ C S VC Y I L + K SC
Sbjct: 315 QNDEFCKICKETENL--LLCDSCVCSFHAYCIDPPLTEVPKEETWSC 359
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 35.8 bits (81), Expect = 0.36, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 16 WCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWIC 58
+C C+ GGE+ LCD C + YH C+D E A + KW C
Sbjct: 381 YCEVCQQGGEIILCDT--CPRAYHLVCLDP-ELDRAPEGKWSC 420
Score = 31.6 bits (70), Expect = 6.5, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 16 WCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCR 67
+C CK GGEL CD C+ YH C++ + +W+C C V +
Sbjct: 458 YCRVCKDGGELLCCD--ACISSYHIHCLNPPLPDI-PNGEWLCPRCTCPVLK 506
>sp|Q56R14|TRI33_XENLA E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis GN=trim33 PE=1
SV=1
Length = 1091
Score = 35.0 bits (79), Expect = 0.58, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 10/60 (16%)
Query: 13 SEIWCFKCKHGGELRLCDNTRCLKVYHPEC-VDKDESFLAAKTKWICNWHFCGVCRKASK 71
+E WC C++GG+L C+ +C KV+H C V SF + +WIC + CR +K
Sbjct: 849 NEDWCAVCQNGGDLLCCE--KCPKVFHLTCHVPTLLSFPSG--EWICTF-----CRDLNK 899
>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1
SV=3
Length = 1242
Score = 35.0 bits (79), Expect = 0.71, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 13 SEIWCFKCKHGGELRLCDNTRCLKVYHPEC-VDKDESFLAAKTKWICNWHFCGVCRKASK 71
+E +C C +GGEL CD RC KVYH C V SF +W+C +CR ++
Sbjct: 995 NEDFCAVCINGGELLCCD--RCPKVYHLSCHVPALLSFPGG--EWVCT-----LCRSLTQ 1045
>sp|Q15326|ZMY11_HUMAN Zinc finger MYND domain-containing protein 11 OS=Homo sapiens
GN=ZMYND11 PE=1 SV=2
Length = 602
Score = 34.7 bits (78), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 16 WCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCRKASK 71
+CF+C GE+ +CD C +VYH +C+ + + + W C VCR K
Sbjct: 102 YCFECHLPGEVLICD--LCFRVYHSKCLSDEFRLRDSSSPWQ-----CPVCRSIKK 150
>sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=1 SV=2
Length = 659
Score = 34.7 bits (78), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 11 EISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWIC 58
+I E +C C+ G+L +CD C +VYH +C++ + K WIC
Sbjct: 465 DIHEDFCSVCRKSGQLLMCDT--CSRVYHLDCLEPPLKTI-PKGMWIC 509
>sp|Q8R5C8|ZMY11_MOUSE Zinc finger MYND domain-containing protein 11 OS=Mus musculus
GN=Zmynd11 PE=2 SV=2
Length = 602
Score = 34.7 bits (78), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 11 EISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCRKAS 70
E + +CF+C GE+ +CD C +VYH +C+ + + + W C VCR
Sbjct: 97 ETHDWYCFECHLPGEVLICD--LCFRVYHSKCLSDEFRLRDSSSHWQ-----CPVCRSIK 149
Query: 71 K 71
K
Sbjct: 150 K 150
>sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=Homo sapiens GN=TRIM66 PE=2
SV=4
Length = 1216
Score = 33.1 bits (74), Expect = 2.3, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 13 SEIWCFKCKHGGELRLCDNTRCLKVYHPEC-VDKDESFLAAKTKWICNWHFCGVCRKASK 71
+E +C C +GGEL CD RC KV+H C V SF +W+C +CR ++
Sbjct: 969 NEDFCAVCLNGGELLCCD--RCPKVFHLSCHVPALLSFPGG--EWVCT-----LCRSLTQ 1019
>sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2
Length = 1004
Score = 33.1 bits (74), Expect = 2.4, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 17 CFKCKHGGELRLCDNTRCLKVYHPECVDKDES-FLAAKTKWICNWHFCGVCRK 68
C CK GG+L CD+ C +H +C + S + +W+C H C V RK
Sbjct: 59 CDSCKEGGDLLCCDH--CPAAFHLQCCNPPLSEEMLPPGEWMC--HRCTVRRK 107
>sp|Q5SPL2|PHF12_MOUSE PHD finger protein 12 OS=Mus musculus GN=Phf12 PE=2 SV=1
Length = 1003
Score = 33.1 bits (74), Expect = 2.5, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 17 CFKCKHGGELRLCDNTRCLKVYHPECVDKDES-FLAAKTKWICNWHFCGVCRK 68
C CK GG+L CD+ C +H +C + S + +W+C H C V RK
Sbjct: 59 CDSCKEGGDLLCCDH--CPAAFHLQCCNPPLSEEMLPPGEWMC--HRCTVRRK 107
>sp|P30432|FUR2_DROME Furin-like protease 2 OS=Drosophila melanogaster GN=Fur2 PE=2 SV=2
Length = 1679
Score = 32.3 bits (72), Expect = 3.8, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 37/101 (36%), Gaps = 24/101 (23%)
Query: 17 CFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICN--WHFCGVCRKASKFYC 74
C +C G +L + C HPEC E F K+ + C H+C C A C
Sbjct: 1322 CVQCPAGWQLAAGE---C----HPEC---PEGFY--KSDFGCQKCHHYCKTCNDAGPLAC 1369
Query: 75 FCCP------SAVCKTCL----YDIQFALVKENKGFCNSCL 105
CP +C CL YD A K C SC
Sbjct: 1370 TSCPPHSMLDGGLCMECLSSQYYDTTSATCKTCHDSCRSCF 1410
>sp|Q24742|TRX_DROVI Histone-lysine N-methyltransferase trithorax OS=Drosophila virilis
GN=trx PE=3 SV=1
Length = 3828
Score = 32.3 bits (72), Expect = 3.8, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 38/105 (36%), Gaps = 23/105 (21%)
Query: 17 CFKCK-HGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWIC-NWHFCGVC--RKASKF 72
C+ C G C +C K YH C+ + L A IC N C C K SKF
Sbjct: 1334 CYTCNMSSGSKVKCQ--KCQKNYHSTCLGTSKRLLGADRPLICVNCLKCKSCATTKVSKF 1391
Query: 73 Y--------CF-------CCPSAVCKTCLYDIQFALVKENKGFCN 102
CF CP +C+ C D F L G CN
Sbjct: 1392 VGNLPMCTACFKLRKKGNFCP--ICQKCYDDNDFDLKMMECGDCN 1434
>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2
PE=1 SV=2
Length = 5537
Score = 32.3 bits (72), Expect = 4.0, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 16/103 (15%)
Query: 17 CFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKT-KWICNWHF----------CGV 65
C C G C + C ++YH C SFL+ KT + +C H C V
Sbjct: 172 CSHCTRLGASIPCRSPGCPRLYHFPCATASGSFLSMKTLQLLCPEHSEGAAYLEEARCAV 231
Query: 66 CRKASK----FYCFCCPSAVCKTCLYDIQFALVKENKGFCNSC 104
C + F+C C CL D K C C
Sbjct: 232 CEGPGELCDLFFCTSCGHHYHGACL-DTALTARKRAGWQCPEC 273
>sp|Q949T8|ASHR3_ARATH Histone-lysine N-methyltransferase ASHR3 OS=Arabidopsis thaliana
GN=ASHR3 PE=1 SV=1
Length = 497
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 9 KEEISEIWCFKCKHGGELRLCDNTRCLKVYHPECVDKDESFLAAKTKWICNWHFCGVCRK 68
K+ + + C K + GE C C YH C + F + +K+ C H C VC++
Sbjct: 116 KKMVDCLVCHKPVYPGEDLSCSVRGCQGAYHSLCAKESLGF-SKSSKFKCPQHECFVCKQ 174
Query: 69 ASKFYCFCCPSAV 81
+++ C CP A
Sbjct: 175 RTQWRCVKCPMAA 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.134 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,773,240
Number of Sequences: 539616
Number of extensions: 4609870
Number of successful extensions: 16206
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 16123
Number of HSP's gapped (non-prelim): 104
length of query: 299
length of database: 191,569,459
effective HSP length: 117
effective length of query: 182
effective length of database: 128,434,387
effective search space: 23375058434
effective search space used: 23375058434
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)