Query 045240
Match_columns 341
No_of_seqs 399 out of 3415
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 19:48:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 3.6E-25 1.2E-29 185.0 10.4 137 8-173 6-146 (169)
2 3twr_A Tankyrase-2; ankyrin re 99.9 5.6E-24 1.9E-28 176.0 8.6 149 2-178 4-156 (165)
3 1oy3_D Transcription factor in 99.9 1.2E-23 4.2E-28 188.3 11.0 168 2-172 5-234 (282)
4 1awc_B Protein (GA binding pro 99.9 2.7E-23 9.1E-28 170.0 11.2 137 7-173 3-143 (153)
5 2rfm_A Putative ankyrin repeat 99.9 1.7E-23 5.8E-28 177.6 10.4 143 2-173 31-177 (192)
6 1yyh_A HN1;, notch 1, ankyrin 99.9 2.3E-23 7.9E-28 184.7 11.3 162 3-173 54-233 (253)
7 3aji_A 26S proteasome non-ATPa 99.9 2.9E-23 9.9E-28 180.8 11.7 158 5-172 39-214 (231)
8 4b93_B Ankyrin repeat domain-c 99.9 8.5E-24 2.9E-28 189.8 8.2 159 4-172 50-227 (269)
9 3v31_A Ankyrin repeat family A 99.9 3.5E-23 1.2E-27 171.6 11.0 139 6-173 3-145 (167)
10 1yyh_A HN1;, notch 1, ankyrin 99.9 5.2E-23 1.8E-27 182.4 12.4 164 2-173 6-200 (253)
11 2f8y_A Notch homolog 1, transl 99.9 9.4E-23 3.2E-27 176.6 12.0 162 3-173 22-201 (223)
12 1oy3_D Transcription factor in 99.9 2E-23 6.7E-28 187.0 7.8 164 3-175 42-270 (282)
13 2y1l_E Darpin-8.4; hydrolase-i 99.9 9.5E-23 3.3E-27 169.6 11.2 140 5-173 13-156 (169)
14 3v30_A DNA-binding protein rfx 99.9 6.4E-23 2.2E-27 170.8 9.6 140 6-173 2-145 (172)
15 2dzn_A Probable 26S proteasome 99.9 6.9E-23 2.3E-27 178.0 9.9 160 7-172 3-183 (228)
16 3utm_A Tankyrase-1; tankyrase, 99.9 1.5E-22 5.1E-27 186.6 12.4 92 3-100 55-150 (351)
17 2rfa_A Transient receptor pote 99.9 6.8E-23 2.3E-27 178.7 9.2 164 5-173 2-207 (232)
18 3b7b_A Euchromatic histone-lys 99.9 1.8E-22 6.2E-27 176.5 11.4 161 2-172 7-186 (237)
19 2xai_A ASB-9, ankyrin repeat a 99.9 1.6E-22 5.5E-27 180.1 11.0 155 5-171 2-174 (261)
20 1s70_B 130 kDa myosin-binding 99.9 1.6E-22 5.6E-27 182.9 11.1 106 4-119 38-147 (299)
21 4gpm_A Engineered protein OR26 99.9 6.8E-23 2.3E-27 171.1 7.7 119 2-130 33-155 (169)
22 3f6q_A Integrin-linked protein 99.9 1.1E-22 3.8E-27 170.7 8.9 141 6-174 5-149 (179)
23 3jxi_A Vanilloid receptor-rela 99.9 3.8E-23 1.3E-27 183.6 6.3 154 4-173 44-235 (260)
24 2etb_A Transient receptor pote 99.9 1.5E-22 5.2E-27 179.4 10.1 154 2-173 39-231 (256)
25 3kea_A K1L; tropism, ANK repea 99.9 7.4E-23 2.5E-27 185.0 8.1 160 2-173 27-205 (285)
26 2xai_A ASB-9, ankyrin repeat a 99.9 2.7E-22 9.2E-27 178.7 11.5 159 3-172 33-208 (261)
27 1k1a_A B-cell lymphoma 3-encod 99.9 3.2E-22 1.1E-26 175.1 10.7 168 3-172 6-192 (241)
28 3aji_A 26S proteasome non-ATPa 99.9 3.6E-22 1.2E-26 173.9 10.5 162 2-172 2-181 (231)
29 1k1a_A B-cell lymphoma 3-encod 99.9 6.4E-22 2.2E-26 173.2 12.0 168 3-179 43-233 (241)
30 3b7b_A Euchromatic histone-lys 99.9 5.9E-22 2E-26 173.2 11.7 161 4-173 42-220 (237)
31 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.7E-22 9.2E-27 164.2 8.1 139 5-173 1-143 (156)
32 3hra_A Ankyrin repeat family p 99.9 4E-22 1.4E-26 169.9 9.4 160 5-173 4-188 (201)
33 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.8E-22 6.3E-27 166.1 6.9 138 6-173 5-147 (162)
34 2dzn_A Probable 26S proteasome 99.9 1.2E-21 3.9E-26 170.2 12.0 163 3-172 33-217 (228)
35 3d9h_A CDNA FLJ77766, highly s 99.9 7.3E-22 2.5E-26 178.4 10.6 159 2-172 55-231 (285)
36 2pnn_A Transient receptor pote 99.9 2.4E-22 8.2E-27 179.9 7.3 155 3-173 51-243 (273)
37 3c5r_A BARD-1, BRCA1-associate 99.9 2.7E-22 9.3E-27 160.8 6.7 114 36-173 6-119 (137)
38 2rfa_A Transient receptor pote 99.9 4.5E-22 1.5E-26 173.5 8.1 134 39-173 2-164 (232)
39 3d9h_A CDNA FLJ77766, highly s 99.9 1.3E-21 4.5E-26 176.7 11.3 130 37-171 56-198 (285)
40 3ljn_A Hypothetical protein; a 99.9 1.3E-21 4.3E-26 182.5 11.4 160 3-172 17-253 (364)
41 2etb_A Transient receptor pote 99.9 8.9E-22 3.1E-26 174.4 9.2 144 5-172 1-181 (256)
42 3jxi_A Vanilloid receptor-rela 99.9 1.4E-21 4.9E-26 173.4 10.4 146 3-172 2-185 (260)
43 3aaa_C Myotrophin, protein V-1 99.9 9.2E-22 3.2E-26 154.8 8.1 111 37-171 4-114 (123)
44 4hbd_A KN motif and ankyrin re 99.9 6.1E-22 2.1E-26 178.2 7.7 133 37-173 108-260 (276)
45 1sw6_A Regulatory protein SWI6 99.8 3.5E-22 1.2E-26 184.1 5.5 132 37-172 128-325 (327)
46 1ycs_B 53BP2, P53BP2; ankyrin 99.8 7.1E-22 2.4E-26 173.8 6.7 137 4-170 3-144 (239)
47 1n11_A Ankyrin; clathrin, BAND 99.8 3.5E-21 1.2E-25 183.8 11.8 161 3-173 11-189 (437)
48 4b93_B Ankyrin repeat domain-c 99.8 1.4E-21 4.7E-26 175.3 8.3 135 34-173 46-195 (269)
49 1n11_A Ankyrin; clathrin, BAND 99.8 3.6E-21 1.2E-25 183.7 11.4 158 6-173 212-387 (437)
50 4g8k_A 2-5A-dependent ribonucl 99.8 1E-20 3.5E-25 174.4 14.0 167 3-173 22-249 (337)
51 1ikn_D Protein (I-kappa-B-alph 99.8 6.4E-22 2.2E-26 173.2 5.2 167 4-172 6-193 (236)
52 1wdy_A 2-5A-dependent ribonucl 99.8 8.3E-21 2.8E-25 169.6 12.3 161 3-172 2-191 (285)
53 1bi7_B P16INK4A, MTS1, multipl 99.8 3.9E-22 1.3E-26 163.7 3.2 136 5-170 11-151 (156)
54 3utm_A Tankyrase-1; tankyrase, 99.8 4.8E-21 1.7E-25 176.4 10.9 119 3-130 21-143 (351)
55 3v30_A DNA-binding protein rfx 99.8 1.9E-21 6.6E-26 161.8 7.4 135 3-166 33-171 (172)
56 1d9s_A Cyclin-dependent kinase 99.8 1.1E-21 3.9E-26 157.2 5.6 114 35-173 7-121 (136)
57 3eu9_A Huntingtin-interacting 99.8 1.4E-20 4.9E-25 164.0 12.9 161 4-173 40-220 (240)
58 2jab_A H10-2-G3; HER2, darpin, 99.8 3.7E-21 1.3E-25 154.1 7.5 113 37-173 11-123 (136)
59 3t8k_A Uncharacterized protein 99.8 1.2E-20 4.1E-25 159.9 10.4 156 4-185 4-177 (186)
60 2pnn_A Transient receptor pote 99.8 2.1E-21 7.2E-26 173.8 5.8 148 3-173 10-194 (273)
61 2jab_A H10-2-G3; HER2, darpin, 99.8 8.2E-21 2.8E-25 152.1 8.7 117 4-130 12-132 (136)
62 2fo1_E LIN-12 protein; beta-ba 99.8 5.8E-21 2E-25 179.1 8.5 165 3-173 163-356 (373)
63 3deo_A Signal recognition part 99.8 6.4E-21 2.2E-25 160.7 7.3 114 35-173 39-153 (183)
64 1wdy_A 2-5A-dependent ribonucl 99.8 3.6E-20 1.2E-24 165.5 12.0 165 3-173 36-229 (285)
65 1n0r_A 4ANK, 4 ankyrin repeats 99.8 2.9E-20 1E-24 145.8 9.2 110 39-172 1-110 (126)
66 1d9s_A Cyclin-dependent kinase 99.8 4.8E-21 1.6E-25 153.5 3.7 118 2-130 8-130 (136)
67 2vge_A RELA-associated inhibit 99.8 1.5E-20 5E-25 164.6 6.7 127 18-170 1-128 (229)
68 1awc_B Protein (GA binding pro 99.8 1.8E-20 6.3E-25 153.0 6.8 117 3-129 31-151 (153)
69 2rfm_A Putative ankyrin repeat 99.8 2.8E-20 9.6E-25 157.6 6.9 115 35-173 30-144 (192)
70 2f8y_A Notch homolog 1, transl 99.8 1.7E-19 6E-24 155.9 12.0 149 17-173 6-168 (223)
71 3ehr_A Osteoclast-stimulating 99.8 2.8E-20 9.5E-25 161.4 6.9 116 33-172 66-182 (222)
72 1ikn_D Protein (I-kappa-B-alph 99.8 1.6E-20 5.4E-25 164.3 4.9 161 3-172 42-228 (236)
73 3c5r_A BARD-1, BRCA1-associate 99.8 1.3E-20 4.6E-25 150.9 4.0 119 2-130 6-128 (137)
74 1bi7_B P16INK4A, MTS1, multipl 99.8 2.4E-20 8.2E-25 153.0 5.4 113 36-173 8-121 (156)
75 3ui2_A Signal recognition part 99.8 3.2E-20 1.1E-24 163.8 6.6 112 36-172 41-153 (244)
76 2vge_A RELA-associated inhibit 99.8 9.3E-21 3.2E-25 165.8 3.1 159 4-172 19-197 (229)
77 1n0q_A 3ANK, 3 ankyrin repeats 99.8 5.8E-20 2E-24 137.2 6.9 87 39-130 1-87 (93)
78 3deo_A Signal recognition part 99.8 2.7E-19 9.3E-24 150.7 11.7 111 4-125 42-157 (183)
79 3ljn_A Hypothetical protein; a 99.8 1.8E-19 6.1E-24 167.9 11.3 135 36-171 134-297 (364)
80 2l6b_A NR1C; ankyrin, consensu 99.8 3.1E-20 1E-24 144.2 4.7 109 36-168 5-113 (115)
81 3v31_A Ankyrin repeat family A 99.8 1.3E-19 4.5E-24 149.9 8.4 111 39-173 2-112 (167)
82 3aaa_C Myotrophin, protein V-1 99.8 3.9E-20 1.3E-24 145.4 5.0 107 5-121 6-116 (123)
83 3eu9_A Huntingtin-interacting 99.8 2.3E-19 7.8E-24 156.3 10.4 141 3-171 6-150 (240)
84 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.4E-19 4.8E-24 141.8 8.0 115 6-130 2-120 (126)
85 1bd8_A P19INK4D CDK4/6 inhibit 99.8 7.3E-20 2.5E-24 149.6 6.6 116 3-130 33-152 (156)
86 2fo1_E LIN-12 protein; beta-ba 99.8 2.8E-20 9.4E-25 174.4 4.0 163 4-173 123-323 (373)
87 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.7E-19 5.7E-24 149.8 8.0 118 3-130 44-165 (169)
88 1ihb_A P18-INK4C(INK6), cyclin 99.8 8.6E-20 3E-24 150.0 6.1 119 3-130 35-156 (162)
89 3hra_A Ankyrin repeat family p 99.8 5.2E-19 1.8E-23 150.4 10.4 131 38-172 3-149 (201)
90 1s70_B 130 kDa myosin-binding 99.8 4.1E-19 1.4E-23 160.5 10.3 89 37-130 37-125 (299)
91 3twr_A Tankyrase-2; ankyrin re 99.8 1.6E-19 5.4E-24 149.1 6.7 115 36-173 4-118 (165)
92 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.5E-19 5.3E-24 158.8 7.0 115 6-130 37-158 (239)
93 4hbd_A KN motif and ankyrin re 99.8 1.4E-19 4.7E-24 162.7 6.7 131 39-173 75-226 (276)
94 1sw6_A Regulatory protein SWI6 99.8 1E-19 3.4E-24 167.6 5.0 118 6-129 52-185 (327)
95 2b0o_E UPLC1; arfgap, structur 99.8 9.8E-20 3.3E-24 165.9 4.9 136 8-173 153-296 (301)
96 3t8k_A Uncharacterized protein 99.8 5.3E-20 1.8E-24 155.9 2.3 117 4-130 36-173 (186)
97 3f6q_A Integrin-linked protein 99.8 6.1E-19 2.1E-23 147.7 8.1 113 38-173 3-115 (179)
98 3ehr_A Osteoclast-stimulating 99.8 1.1E-19 3.9E-24 157.6 3.5 116 5-130 72-192 (222)
99 3ui2_A Signal recognition part 99.8 3.2E-18 1.1E-22 151.0 12.5 109 5-124 44-157 (244)
100 3kea_A K1L; tropism, ANK repea 99.8 4.1E-19 1.4E-23 160.3 6.8 143 14-172 12-170 (285)
101 3jue_A Arfgap with coiled-coil 99.8 4.7E-19 1.6E-23 165.5 7.2 144 5-172 198-346 (368)
102 1dcq_A PYK2-associated protein 99.7 1.2E-18 4.3E-23 156.8 7.3 120 6-130 130-257 (278)
103 3lvq_E ARF-GAP with SH3 domain 99.7 1.4E-18 4.7E-23 169.1 6.9 118 8-130 134-259 (497)
104 2zgd_A 3 repeat synthetic anky 99.7 1.8E-18 6.3E-23 133.4 6.0 92 32-128 16-107 (110)
105 4g8k_A 2-5A-dependent ribonucl 99.7 7.1E-18 2.4E-22 155.3 10.4 146 3-173 122-283 (337)
106 2b0o_E UPLC1; arfgap, structur 99.7 5.2E-17 1.8E-21 147.8 9.9 110 40-173 151-269 (301)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.7 8.7E-17 3E-21 119.8 8.6 88 6-99 2-93 (93)
108 1dcq_A PYK2-associated protein 99.7 6.8E-17 2.3E-21 145.4 9.0 110 41-173 131-248 (278)
109 2aja_A Ankyrin repeat family p 99.7 1.6E-18 5.4E-23 162.5 -2.0 151 4-159 90-254 (376)
110 3jue_A Arfgap with coiled-coil 99.7 4.1E-17 1.4E-21 152.4 7.4 111 39-173 198-311 (368)
111 3lvq_E ARF-GAP with SH3 domain 99.6 1.3E-16 4.3E-21 155.2 7.9 108 41-172 133-249 (497)
112 2l6b_A NR1C; ankyrin, consensu 99.6 7.5E-17 2.6E-21 124.8 4.5 104 2-115 5-112 (115)
113 2aja_A Ankyrin repeat family p 99.6 2.9E-16 1E-20 147.1 0.4 112 4-130 126-244 (376)
114 2zgd_A 3 repeat synthetic anky 99.5 8.4E-14 2.9E-18 106.9 8.1 85 3-93 21-109 (110)
115 1gp8_A Protein (scaffolding pr 45.2 14 0.00049 21.4 2.1 19 43-61 16-34 (40)
116 4ev6_A Magnesium transport pro 23.2 71 0.0024 28.3 4.1 21 276-296 281-301 (339)
117 2iub_A CORA, divalent cation t 23.0 53 0.0018 29.5 3.3 21 276-296 305-325 (363)
118 3zrh_A Ubiquitin thioesterase 23.0 1.3E+02 0.0044 27.7 5.6 52 45-96 27-91 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.92 E-value=3.6e-25 Score=184.97 Aligned_cols=137 Identities=26% Similarity=0.259 Sum_probs=119.9
Q ss_pred hhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHH
Q 045240 8 ELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAIL 83 (341)
Q Consensus 8 ~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~ 83 (341)
+.|+.|+ .++|+.|++++.+++. +|.+|+||||+|+..|+.++++.|++.+.+ ++.+|.+|+||||+|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~-----~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-~~~~d~~g~TpLh~A~~ 79 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNA-----SDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAE 79 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCC-----cCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hhhhccCCCCHHHHHHH
Confidence 3577777 4599999999888765 457899999999999999999999999999 68999999999999999
Q ss_pred cCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCC
Q 045240 84 NRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDG 163 (341)
Q Consensus 84 ~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G 163 (341)
+|+.+++++|++.|++. |.+|.+|+||||+|++.|+.++++.| +..+++++.+|++|
T Consensus 80 ~g~~~~v~~Ll~~gadv----n~~d~~G~TpLh~A~~~g~~~~v~~L-------------------l~~gad~~~~d~~G 136 (169)
T 4gpm_A 80 NGHKEVVKLLISKGADV----NAKDSDGRTPLHHAAENGHKEVVKLL-------------------ISKGADVNTSDSDG 136 (169)
T ss_dssp TTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTS
T ss_pred cCCHHHHHHHHHCcCCC----CCCCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCccccCCCC
Confidence 99999999999999874 56999999999999999996654433 22688999999999
Q ss_pred CChhHHHHHH
Q 045240 164 KTPRELFTVE 173 (341)
Q Consensus 164 ~Tpl~la~~~ 173 (341)
+||+++|.+.
T Consensus 137 ~TpL~~A~~~ 146 (169)
T 4gpm_A 137 RTPLDLAREH 146 (169)
T ss_dssp CCHHHHHHHT
T ss_pred CCHHHHHHHc
Confidence 9999999764
No 2
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.90 E-value=5.6e-24 Score=176.05 Aligned_cols=149 Identities=22% Similarity=0.169 Sum_probs=122.2
Q ss_pred cchHHHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcH
Q 045240 2 KCSRNIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSI 77 (341)
Q Consensus 2 k~~~~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~ 77 (341)
.+..+.+++|.++.. +++.|++.. .......+.+|.||||+|+..|+.++++.|++.+++ ++.+|.+|+||
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 78 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQ----SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLVP 78 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTT----TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcC----CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCCH
Confidence 456788999999965 677666542 223334567899999999999999999999999998 68999999999
Q ss_pred HHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchh
Q 045240 78 FHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYRE 157 (341)
Q Consensus 78 LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~ 157 (341)
||+|+.+|+.+++++|++.|.+. |.+|.+|+||||+|+..|+.++++.| +..+++++
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~ 135 (165)
T 3twr_A 79 LHNACSYGHYEVAELLVKHGAVV----NVADLWKFTPLHEAAAKGKYEICKLL-------------------LQHGADPT 135 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT----TCCCTTCCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTT
T ss_pred HHHHHHcCcHHHHHHHHhCCCCC----CCcCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCCc
Confidence 99999999999999999999874 55899999999999999986654433 22678899
Q ss_pred cccCCCCChhHHHHHHHHHHH
Q 045240 158 MKNYDGKTPRELFTVEHLELL 178 (341)
Q Consensus 158 ~~n~~G~Tpl~la~~~~~~l~ 178 (341)
.+|.+|+||+++|.+.+.+..
T Consensus 136 ~~~~~g~t~l~~a~~~~~~i~ 156 (165)
T 3twr_A 136 KKNRDGNTPLDLVKDGDTDIQ 156 (165)
T ss_dssp CCCTTSCCTGGGSCTTCHHHH
T ss_pred ccCCCCCChhHhHhcCChHHH
Confidence 999999999999977555443
No 3
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.90 E-value=1.2e-23 Score=188.33 Aligned_cols=168 Identities=14% Similarity=0.119 Sum_probs=142.1
Q ss_pred cchHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcH
Q 045240 2 KCSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSI 77 (341)
Q Consensus 2 k~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~ 77 (341)
++..++|++|+|+. +++++|++.+.+.+. +..+|..|+||||+|+..|+.++++.|++++++ ++.+|..|+||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tp 81 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEY--LDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VLVAERGGHTA 81 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGG--GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTSCCH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc--ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCH
Confidence 45678899999995 599999999877432 333567899999999999999999999999998 68899999999
Q ss_pred HHHHHHcCChhHHHHHHhcCCcc-------------------------------------------cchhhcccCCCCcH
Q 045240 78 FHIAILNRHMNVFNLIYEQGFNK-------------------------------------------QLLATYLDSCGNNI 114 (341)
Q Consensus 78 LH~Aa~~g~~~iv~~Ll~~~~~~-------------------------------------------~~l~n~~d~~G~Tp 114 (341)
||+|+.+|+.+++++|++.+.+. ...++.+|.+|+||
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence 99999999999999999987541 11246789999999
Q ss_pred HHHHHHhCCCCCcccc--------------cccHHhhHHHhhhHHHHHHhh-CCcchhcccCCCCChhHHHHH
Q 045240 115 LHLAAKYRSPSPYRTV--------------SGAALEMQRELLIYKEVEMIV-QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 115 LH~Aa~~~~~~~v~~L--------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 172 (341)
||+|+..|+.++++.| ..++++.+...+..+.++.++ .|++++.+|.+|+||+++|.+
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALL 234 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHH
Confidence 9999999998877655 225788888888888888887 689999999999999999964
No 4
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.89 E-value=2.7e-23 Score=169.98 Aligned_cols=137 Identities=17% Similarity=0.078 Sum_probs=119.0
Q ss_pred HhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHH
Q 045240 7 IELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAI 82 (341)
Q Consensus 7 ~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa 82 (341)
.+++|.|+. ++++.|++.+.+.+ .|..|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~ 75 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAA 75 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH
Confidence 578899885 49999999987654 356899999999999999999999999988 6889999999999999
Q ss_pred HcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCC
Q 045240 83 LNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYD 162 (341)
Q Consensus 83 ~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~ 162 (341)
.+|+.+++++|++.|.+. +.+|.+|+||||+|+..|+.++++.| +..+++++.+|.+
T Consensus 76 ~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~ 132 (153)
T 1awc_B 76 SEGHANIVEVLLKHGADV----NAKDMLKMTALHWATEHNHQEVVELL-------------------IKYGADVHTQSKF 132 (153)
T ss_dssp HHTCHHHHHHHHTTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTT
T ss_pred HcChHHHHHHHHHcCCCC----CCCCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCccccCCC
Confidence 999999999999999874 55899999999999999986654433 2268889999999
Q ss_pred CCChhHHHHHH
Q 045240 163 GKTPRELFTVE 173 (341)
Q Consensus 163 G~Tpl~la~~~ 173 (341)
|+||+++|.+.
T Consensus 133 g~t~l~~A~~~ 143 (153)
T 1awc_B 133 CKTAFDISIDN 143 (153)
T ss_dssp SCCHHHHHHHT
T ss_pred CCCHHHHHHHc
Confidence 99999999764
No 5
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.89 E-value=1.7e-23 Score=177.58 Aligned_cols=143 Identities=15% Similarity=0.137 Sum_probs=122.8
Q ss_pred cchHHHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcH
Q 045240 2 KCSRNIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSI 77 (341)
Q Consensus 2 k~~~~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~ 77 (341)
++..++|++|+|+.. +++.|++.+.+.+. .|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 104 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLED-----KDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDFSGKTP 104 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhcccccc-----ccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcH
Confidence 355678999999965 89999999877654 346899999999999999999999999998 68899999999
Q ss_pred HHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchh
Q 045240 78 FHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYRE 157 (341)
Q Consensus 78 LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~ 157 (341)
||+|+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..|+.++++.| +..+++++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~ 161 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGANV----NDRNLEGETPLIVASKYGRSEIVKKL-------------------LELGADIS 161 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCS----SCCCTTCCCHHHHHHHHTCHHHHHHH-------------------HHTTCCTT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCC----CCCCCCCCCHHHHHHHcCCHHHHHHH-------------------HHCCCCCC
Confidence 99999999999999999999874 55899999999999999986654333 22688899
Q ss_pred cccCCCCChhHHHHHH
Q 045240 158 MKNYDGKTPRELFTVE 173 (341)
Q Consensus 158 ~~n~~G~Tpl~la~~~ 173 (341)
.+|.+|.||+++|...
T Consensus 162 ~~~~~g~t~l~~A~~~ 177 (192)
T 2rfm_A 162 ARDLTGLTAEASARIF 177 (192)
T ss_dssp CBCTTSCBHHHHHHHT
T ss_pred CcCCCCCCHHHHHHHh
Confidence 9999999999999754
No 6
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.89 E-value=2.3e-23 Score=184.69 Aligned_cols=162 Identities=12% Similarity=0.082 Sum_probs=129.8
Q ss_pred chHHHhhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+..+.|++|+|+ .++++.|++++.+.+.. |.+|+||||+|+..|+.++++.|++.++..++.+|..|+|||
T Consensus 54 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L 128 (253)
T 1yyh_A 54 DRTGETALHLAARYSRSDAAKRLLEASADANIQ-----DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPL 128 (253)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-----CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC-----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHH
Confidence 456678899888 45888888887775543 467889999999999999999999888754788888899999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHH
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYK 145 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~ 145 (341)
|+|+..|+.+++++|++.|.+. |.+|.+|+||||+|+..|+.++++.| ..++++.+...+..+
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~~----~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~ 204 (253)
T 1yyh_A 129 ILAARLAVEGMLEDLINSHADV----NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE 204 (253)
T ss_dssp HHHHHHTCSSHHHHHHHTTCCT----TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHcChHHHHHHHHHcCCCC----CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHH
Confidence 9999999999999999888764 55888899999999998887776655 135677777777777
Q ss_pred HHHHhh-CCcchhcccCCCCChhHHHHHH
Q 045240 146 EVEMIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 146 ~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
.++.++ .+++++.+|.+|+||+++|.+.
T Consensus 205 ~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 233 (253)
T 1yyh_A 205 TAKVLLDHFANRDITDHMDRLPRDIAQER 233 (253)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHcCCCccccccCCCCHHHHHHHc
Confidence 787777 6788888888899998888654
No 7
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.89 E-value=2.9e-23 Score=180.85 Aligned_cols=158 Identities=18% Similarity=0.148 Sum_probs=88.2
Q ss_pred HHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHH
Q 045240 5 RNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHI 80 (341)
Q Consensus 5 ~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~ 80 (341)
.+.|++|+|+. +++++|++.+.+++. +|.+|.||||+|+..|+.++++.|++++++ ++.+|..|+||||+
T Consensus 39 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 112 (231)
T 3aji_A 39 DSRTALHWACSAGHTEIVEFLLQLGVPVND-----KDDAGWSPLHIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHY 112 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-----CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHhCCCCCC-----cCCCCCCHHHHHHHcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHH
Confidence 34455665552 355555555544333 224556666666666666666666666555 35555666666666
Q ss_pred HHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHHHH
Q 045240 81 AILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYKEV 147 (341)
Q Consensus 81 Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~~v 147 (341)
|+.+|+.+++++|++.|.+. +.+|..|+||||+|+..|+.++++.| ..++++.+...+..+.+
T Consensus 113 A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 188 (231)
T 3aji_A 113 AASKNRHEIAVMLLEGGANP----DAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEA 188 (231)
T ss_dssp HHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCC----CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHH
Confidence 66666666666666655543 33556666666666666655544433 12345555555555555
Q ss_pred HHhh-CCcchhcccCCCCChhHHHHH
Q 045240 148 EMIV-QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 148 ~~l~-~~~~~~~~n~~G~Tpl~la~~ 172 (341)
+.++ .|++++.+|.+|+||+++|.+
T Consensus 189 ~~Ll~~ga~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 189 KFLVTQGASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp HHHHHTTCCSCCCCTTSCCHHHHSCH
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHh
Confidence 5555 456666666666666666643
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.89 E-value=8.5e-24 Score=189.76 Aligned_cols=159 Identities=13% Similarity=0.019 Sum_probs=116.6
Q ss_pred hHHHhhhhHHHH-----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 4 SRNIELMNNQAL-----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 4 ~~~~~~lh~aa~-----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
....+++|+++. ++++.|++.|.+++. +|.+|+||||+|+..|+.++++.|++.+++ ++.++.+|+||+
T Consensus 50 ~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~-----~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~t~l 123 (269)
T 4b93_B 50 PEFCHPLCQCPKCAPAQKRLAKVPASGLGVNV-----TSQDGSSPLHVAALHGRADLIPLLLKHGAN-AGARNADQAVPL 123 (269)
T ss_dssp -------------------------CCCCTTC-----CCTTSCCHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCCCHH
T ss_pred ccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCC-----cCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCCCcc
Confidence 345678888763 367778887777654 346889999999999999999999988888 578888899999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHH
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYK 145 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~ 145 (341)
|+|+..++.+++++|++.|.+. |.+|.+|+||||+|+..|+.++++.| ..++++.+...+..+
T Consensus 124 ~~a~~~~~~~~~~~Ll~~g~~~----n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~ 199 (269)
T 4b93_B 124 HLACQQGHFQVVKCLLDSNAKP----NKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVF 199 (269)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCS----CCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred ccccccChHHHHHHHHHCCCCC----CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHH
Confidence 9999999999999999888764 45888999999999999888887765 135778888888888
Q ss_pred HHHHhh-CCcchhcccCCCCChhHHHHH
Q 045240 146 EVEMIV-QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 146 ~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 172 (341)
.++.++ .|++++.+|++|+||+++|.+
T Consensus 200 ~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 200 VVELLLLHGASVQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCSGGGSCT
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHh
Confidence 888887 789999999999999999965
No 9
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.89 E-value=3.5e-23 Score=171.60 Aligned_cols=139 Identities=14% Similarity=0.085 Sum_probs=120.4
Q ss_pred HHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHH
Q 045240 6 NIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIA 81 (341)
Q Consensus 6 ~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~A 81 (341)
+.|++|.|+. ++++.|++.+.+.+. +|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 76 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINH-----TDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRESALSLA 76 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCC-----CCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHH
Confidence 5689999994 599999998766444 456899999999999999999999999988 688999999999999
Q ss_pred HHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccC
Q 045240 82 ILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNY 161 (341)
Q Consensus 82 a~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~ 161 (341)
+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..|+.++++.| +..+++++.+|.
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~g~~~~~~~~ 133 (167)
T 3v31_A 77 CSKGYTDIVKMLLDCGVDV----NEYDWNGGTPLLYAVHGNHVKCVKML-------------------LESGADPTIETD 133 (167)
T ss_dssp HHHTCHHHHHHHHHHTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCT
T ss_pred HHcCCHHHHHHHHHCCCCC----CcCCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCCCCcCC
Confidence 9999999999999999874 55899999999999999986654433 126788999999
Q ss_pred CCCChhHHHHHH
Q 045240 162 DGKTPRELFTVE 173 (341)
Q Consensus 162 ~G~Tpl~la~~~ 173 (341)
+|+||+++|.+.
T Consensus 134 ~g~t~l~~A~~~ 145 (167)
T 3v31_A 134 SGYNSMDLAVAL 145 (167)
T ss_dssp TSCCHHHHHHHH
T ss_pred CCCCHHHHHHHc
Confidence 999999999764
No 10
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.89 E-value=5.2e-23 Score=182.42 Aligned_cols=164 Identities=16% Similarity=0.137 Sum_probs=118.2
Q ss_pred cchHHHhhhhHHHH-----------------HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCC
Q 045240 2 KCSRNIELMNNQAL-----------------ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYP 64 (341)
Q Consensus 2 k~~~~~~~lh~aa~-----------------~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~ 64 (341)
++..+.|++|+|+. ++++.|++.+.+.+. ..|.+|+||||+|++.|+.++++.|++.++
T Consensus 6 ~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 6 RGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHN----QTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCccc----ccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 56778999999975 578888888776543 235789999999999999999999999999
Q ss_pred cccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------c
Q 045240 65 DFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------S 131 (341)
Q Consensus 65 ~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~ 131 (341)
+ ++.+|..|+||||+|+.+|+.+++++|++.+... ++.+|.+|+||||+|+..++.++++.| .
T Consensus 82 ~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g 157 (253)
T 1yyh_A 82 D-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD---LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157 (253)
T ss_dssp C-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSC---TTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTS
T ss_pred C-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---ccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCC
Confidence 8 6889999999999999999999999999988621 356899999999999999999988765 2
Q ss_pred ccHHhhHHHhhhHHHHHHhh-CCcchhcccCCCCChhHHHHHH
Q 045240 132 GAALEMQRELLIYKEVEMIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 132 ~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
.++++.+...+..+.++.++ .+++++.+|.+|+||+++|.+.
T Consensus 158 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAARE 200 (253)
T ss_dssp CBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHC
Confidence 35788888888888888877 6889999999999999999754
No 11
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.88 E-value=9.4e-23 Score=176.62 Aligned_cols=162 Identities=12% Similarity=0.082 Sum_probs=138.6
Q ss_pred chHHHhhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+..+.|++|+|+ .+++++|++++.+.+. .|.+|.||||.|+..|+.++++.|++.++..++..|..|+|||
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L 96 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASADANI-----QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPL 96 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCCCCCC-----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHH
Confidence 456789999998 4599999999877654 4568999999999999999999999999865788999999999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHH
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYK 145 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~ 145 (341)
|+|+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..|+.++++.| ..++++.+...+..+
T Consensus 97 ~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 172 (223)
T 2f8y_A 97 ILAARLAVEGMLEDLINSHADV----NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE 172 (223)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT----TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHhCcHHHHHHHHHcCCCC----cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHH
Confidence 9999999999999999998864 55899999999999999998877665 135777777777788
Q ss_pred HHHHhh-CCcchhcccCCCCChhHHHHHH
Q 045240 146 EVEMIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 146 ~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
.++.++ .+++++.+|.+|+||+++|.+.
T Consensus 173 ~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 201 (223)
T 2f8y_A 173 TAKVLLDHFANRDITDHMDRLPRDIAQER 201 (223)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHcCCCCccccccCCCHHHHHHHh
Confidence 888777 6888889999999999998654
No 12
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.88 E-value=2e-23 Score=186.97 Aligned_cols=164 Identities=15% Similarity=0.135 Sum_probs=122.9
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcc------------
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDF------------ 66 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~------------ 66 (341)
+..++|++|+|+. +++++|++++.+++.. |.+|.||||+|+..|+.++++.|++.+++.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~-----~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (282)
T 1oy3_D 42 NDLGQTALHLAAILGEASTVEKLYAAGAGVLVA-----ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS 116 (282)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCC-----CTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC-----CCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcc
Confidence 4557899999995 5999999998887643 468999999999999999999999876541
Q ss_pred ----------------------------------cccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccC-CC
Q 045240 67 ----------------------------------VHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDS-CG 111 (341)
Q Consensus 67 ----------------------------------~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~-~G 111 (341)
++.+|..|+||||+|+.+|+.+++++|++.|.+. +.+|. .|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~----~~~~~~~g 192 (282)
T 1oy3_D 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL----NKPEPTCG 192 (282)
T ss_dssp ---------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT----TCCCTTTC
T ss_pred cccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC----CCCCCCCC
Confidence 4567888999999999999999999999998864 44664 49
Q ss_pred CcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHHHHHHhh-CCcchhcccCCCCChhHHHHHHHH
Q 045240 112 NNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYKEVEMIV-QPSYREMKNYDGKTPRELFTVEHL 175 (341)
Q Consensus 112 ~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~~~ 175 (341)
+||||+|+..|+.++++.| ..++++.+...+..+.++.++ +|++++.+|.+|.||++.+.....
T Consensus 193 ~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 193 RTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence 9999999999998877765 135778877777788888877 799999999999999999976544
No 13
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.88 E-value=9.5e-23 Score=169.57 Aligned_cols=140 Identities=19% Similarity=0.159 Sum_probs=121.3
Q ss_pred HHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHH
Q 045240 5 RNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHI 80 (341)
Q Consensus 5 ~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~ 80 (341)
...+++|+|+. +++++|++++.+.+. +|.+|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 86 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGADVNA-----EDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHAGMTPLRL 86 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCCCCC-----CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHH
Confidence 45788999984 599999999877654 346899999999999999999999999988 68899999999999
Q ss_pred HHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhccc
Q 045240 81 AILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKN 160 (341)
Q Consensus 81 Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n 160 (341)
|+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..++.++++.| +..+++++.+|
T Consensus 87 A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~g~~~~~~~ 143 (169)
T 2y1l_E 87 AALFGHLEIVEVLLKNGADV----NANDMEGHTPLHLAAMFGHLEIVEVL-------------------LKNGADVNAQD 143 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHcCCCC----CCCCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCCCCcC
Confidence 99999999999999999874 55899999999999999986654433 22678899999
Q ss_pred CCCCChhHHHHHH
Q 045240 161 YDGKTPRELFTVE 173 (341)
Q Consensus 161 ~~G~Tpl~la~~~ 173 (341)
.+|+||+++|.+.
T Consensus 144 ~~g~t~l~~A~~~ 156 (169)
T 2y1l_E 144 KFGKTAFDISIDN 156 (169)
T ss_dssp TTSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHh
Confidence 9999999999764
No 14
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.88 E-value=6.4e-23 Score=170.83 Aligned_cols=140 Identities=16% Similarity=0.118 Sum_probs=117.6
Q ss_pred HHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHH
Q 045240 6 NIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIA 81 (341)
Q Consensus 6 ~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~A 81 (341)
+.+++|+++.. .++.|++.+.+ ....+|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 76 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDN----LVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-PHILAKERESALSLA 76 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSG----GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcc----cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-chhhcccCCCHHHHH
Confidence 46789999854 77777766433 2344567899999999999999999999999998 688999999999999
Q ss_pred HHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccC
Q 045240 82 ILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNY 161 (341)
Q Consensus 82 a~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~ 161 (341)
+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..++.++++.| +..+++++.+|.
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~ 133 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVDI----NIYDWNGGTPLLYAVRGNHVKCVEAL-------------------LARGADLTTEAD 133 (172)
T ss_dssp HHTTCHHHHHHHHTTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCT
T ss_pred HHCCCHHHHHHHHHcCCCC----CCCCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCccccCC
Confidence 9999999999999999874 55899999999999999986654433 226788999999
Q ss_pred CCCChhHHHHHH
Q 045240 162 DGKTPRELFTVE 173 (341)
Q Consensus 162 ~G~Tpl~la~~~ 173 (341)
+|+||+++|...
T Consensus 134 ~g~t~l~~A~~~ 145 (172)
T 3v30_A 134 SGYTPMDLAVAL 145 (172)
T ss_dssp TSCCHHHHHHHH
T ss_pred CCCCHHHHHHHh
Confidence 999999999764
No 15
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.88 E-value=6.9e-23 Score=177.97 Aligned_cols=160 Identities=15% Similarity=0.092 Sum_probs=99.5
Q ss_pred HhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhC--CcccccccccCCcHHHH
Q 045240 7 IELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSY--PDFVHELDENGRSIFHI 80 (341)
Q Consensus 7 ~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~--~~~~~~~d~~G~t~LH~ 80 (341)
.|++|+|+. ++++.|++.+.+... ..|.+|+||||+|+..|+.++++.|++.+ ++.....|..|+||||+
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~ 78 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLL----QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHI 78 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTT----CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccc----cCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHH
Confidence 466777763 466666666544322 13456777777777777777777777766 44222256677777777
Q ss_pred HHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHHHH
Q 045240 81 AILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYKEV 147 (341)
Q Consensus 81 Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~~v 147 (341)
|+.+|+.+++++|++.|...+ ++.+|.+|+||||+|+..++.++++.| ..++++.+...+..+.+
T Consensus 79 A~~~~~~~~~~~Ll~~g~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 156 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRPLKPD--LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLI 156 (228)
T ss_dssp HHHHCCHHHHHHHHSSSSCCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCcc--cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 777777777777777662222 244666777777777777666655444 12356666666666666
Q ss_pred HHhh-CC-cchhcccCCCCChhHHHHH
Q 045240 148 EMIV-QP-SYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 148 ~~l~-~~-~~~~~~n~~G~Tpl~la~~ 172 (341)
+.++ .+ .+++.+|.+|+||+++|.+
T Consensus 157 ~~Ll~~g~~~~~~~d~~g~t~L~~A~~ 183 (228)
T 2dzn_A 157 ELLCGLGKSAVNWQDKQGWTPLFHALA 183 (228)
T ss_dssp HHHHTTTCCCSCCCCTTSCCHHHHHHH
T ss_pred HHHHhcCcccccCcCCCCCCHHHHHHH
Confidence 6665 34 6667777777777777754
No 16
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.88 E-value=1.5e-22 Score=186.60 Aligned_cols=92 Identities=16% Similarity=0.123 Sum_probs=74.4
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+..+.|++|+|+. +++++|++++.+++.. |.+|.||||+|+..|+.++++.|++++++ ++..|..|+|||
T Consensus 55 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-----~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L 128 (351)
T 3utm_A 55 DGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAK-----DKGGLVPLHNACSYGHYEVTELLLKHGAC-VNAMDLWQFTPL 128 (351)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-----CTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc-----CCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHH
Confidence 3456788888884 5888888887765543 45788999999999999999999988887 578888889999
Q ss_pred HHHHHcCChhHHHHHHhcCCcc
Q 045240 79 HIAILNRHMNVFNLIYEQGFNK 100 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~ 100 (341)
|+|+.+|+.+++++|++.|.+.
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~~ 150 (351)
T 3utm_A 129 HEAASKNRVEVCSLLLSHGADP 150 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999998888888877653
No 17
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.88 E-value=6.8e-23 Score=178.75 Aligned_cols=164 Identities=20% Similarity=0.116 Sum_probs=108.4
Q ss_pred HHHhhhhHHHHH----HHHHHHHH-HhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCccc----ccccccCC
Q 045240 5 RNIELMNNQALE----LVKCLWKE-INRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFV----HELDENGR 75 (341)
Q Consensus 5 ~~~~~lh~aa~~----~v~~Ll~~-~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~----~~~d~~G~ 75 (341)
.++|++|+|+.. +++.|++. +.+++. +|.+|+||||+|+..|+.++++.|++.+++.. +.+|..|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~-----~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 76 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQ-----RGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQ 76 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCccc-----CCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCc
Confidence 356777777743 66666665 444433 34577788888888888888888877777632 44566777
Q ss_pred cHHHHHHHcCChhHHHHHHhcCCcccch---------hhcccCCCCcHHHHHHHhCCCCCcccc-------------ccc
Q 045240 76 SIFHIAILNRHMNVFNLIYEQGFNKQLL---------ATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGA 133 (341)
Q Consensus 76 t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l---------~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~ 133 (341)
||||+|+.+|+.+++++|++.|.+.+.. .+.+|.+|+||||+|+..|+.++++.| ..+
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t 156 (232)
T 2rfa_A 77 TALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNT 156 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence 8888888888888888777777654331 001133677888888777777766654 124
Q ss_pred HHhhHHHhhhHHHH----HHhh-CCcch------hcccCCCCChhHHHHHH
Q 045240 134 ALEMQRELLIYKEV----EMIV-QPSYR------EMKNYDGKTPRELFTVE 173 (341)
Q Consensus 134 ~l~~~~~l~~~~~v----~~l~-~~~~~------~~~n~~G~Tpl~la~~~ 173 (341)
+++.+...+..+.+ +.++ .+++. +.+|.+|+||+++|.+.
T Consensus 157 ~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~ 207 (232)
T 2rfa_A 157 VLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVE 207 (232)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHc
Confidence 56655554444444 5554 45555 68999999999999764
No 18
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.88 E-value=1.8e-22 Score=176.46 Aligned_cols=161 Identities=16% Similarity=0.184 Sum_probs=99.9
Q ss_pred cchHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcH
Q 045240 2 KCSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSI 77 (341)
Q Consensus 2 k~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~ 77 (341)
++..+.|++|+|+. +++++|++++.+.+.. |.+|.||||.|+..|+.++++.|++.+.+ ++.+|..|+||
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 80 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTC-----SEDQRTPLMEAAENNHLEAVKYLIKAGAL-VDPKDAEGSTC 80 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC-----CTTCCCHHHHHHHTTCHHHHHHHHTTTCC-CCCCCTTSCCH
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCcc-----CCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCcH
Confidence 34556777887774 3777777776665432 34667777777777777777777776666 45666677777
Q ss_pred HHHHHHcCChhHHHHHHhcC-CcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhh
Q 045240 78 FHIAILNRHMNVFNLIYEQG-FNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLI 143 (341)
Q Consensus 78 LH~Aa~~g~~~iv~~Ll~~~-~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~ 143 (341)
||+|+.+|+.+++++|++.+ .+ ++.+|..|+||||+|+..++.++++.| ..++++.+...+.
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 156 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQMD----VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGC 156 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHhCCCCC----cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCC
Confidence 77777777777777777665 22 234566666666666666665555443 1134555555555
Q ss_pred HHHHHHhh-CCcchhcccCCCCChhHHHHH
Q 045240 144 YKEVEMIV-QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 144 ~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 172 (341)
.+.++.++ .+.+++.+|.+|+||+++|.+
T Consensus 157 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 186 (237)
T 3b7b_A 157 VDIAEILLAAKCDLHAVNIHGDSPLHIAAR 186 (237)
T ss_dssp HHHHHHHHTTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 55555555 355566666666666666643
No 19
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.88 E-value=1.6e-22 Score=180.13 Aligned_cols=155 Identities=14% Similarity=0.096 Sum_probs=85.0
Q ss_pred HHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHH
Q 045240 5 RNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHI 80 (341)
Q Consensus 5 ~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~ 80 (341)
.++|++|+|+. ++++.|++++.+++. +|.+|.||||+|+..|+.++++.|++.+.+ ++.+|.+|+||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 75 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNI-----ITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFN 75 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSC-----CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----cCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHH
Confidence 35666777664 366666666555443 234566666666666666666666666666 45666666666666
Q ss_pred HHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHHHH
Q 045240 81 AILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYKEV 147 (341)
Q Consensus 81 Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~~v 147 (341)
|+.+|+.+++++|++.|.+.+ .+.+|+||||+|+..|+.++++.| ..++++.+...+..+.+
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 150 (261)
T 2xai_A 76 ACVSGSWDCVNLLLQHGASVQ-----PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACV 150 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCSS-----CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCC-----CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHH
Confidence 666666666666666665432 233455555555555554444333 11344444444444444
Q ss_pred HHhh-CCcchhcccCCCCChhHHHH
Q 045240 148 EMIV-QPSYREMKNYDGKTPRELFT 171 (341)
Q Consensus 148 ~~l~-~~~~~~~~n~~G~Tpl~la~ 171 (341)
+.++ .+.+++. |.+|.||+|+|.
T Consensus 151 ~~Ll~~g~~~~~-~~~g~t~Lh~A~ 174 (261)
T 2xai_A 151 KKLLESGADVNQ-GKGQDSPLHAVA 174 (261)
T ss_dssp HHHHHHTCCTTC-CBTTBCHHHHHH
T ss_pred HHHHHcCCCCCC-CCCCCChHHHHH
Confidence 4444 2444442 444555555543
No 20
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.87 E-value=1.6e-22 Score=182.91 Aligned_cols=106 Identities=16% Similarity=0.112 Sum_probs=87.1
Q ss_pred hHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHH
Q 045240 4 SRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFH 79 (341)
Q Consensus 4 ~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH 79 (341)
..+.+++|.|+. ++++.|++++.+++. .|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~ 111 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLERGADINY-----ANVDGLTALHQACIDDNVDMVKFLVENGAN-INQPDNEGWIPLH 111 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCCTTC-----BCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHcCCCCcc-----cCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHH
Confidence 346789999984 599999999877665 346899999999999999999999999998 6889999999999
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHH
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAA 119 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa 119 (341)
+|+.+|+.+++++|++.|.+.+. +|.+|+||||+|+
T Consensus 112 ~A~~~g~~~~v~~Ll~~g~~~~~----~~~~g~t~l~~A~ 147 (299)
T 1s70_B 112 AAASCGYLDIAEYLISQGAHVGA----VNSEGDTPLDIAE 147 (299)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTC----CCTTSCCHHHHCC
T ss_pred HHHHcCCHHHHHHHHhCCCCCCC----cCCCCCCHHHHHH
Confidence 99999999999999999876432 4444444444433
No 21
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.87 E-value=6.8e-23 Score=171.08 Aligned_cols=119 Identities=26% Similarity=0.236 Sum_probs=105.6
Q ss_pred cchHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcH
Q 045240 2 KCSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSI 77 (341)
Q Consensus 2 k~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~ 77 (341)
++..++|++|+++. ++++.|++.+.+++. +|.+|+||||+|++.|+.++++.|++++++ ++.+|.+|+||
T Consensus 33 ~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~-----~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-vn~~d~~G~Tp 106 (169)
T 4gpm_A 33 SDSDGRTPLHHAAENGHKEVVKLLISKGADVNA-----KDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTP 106 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh-----hccCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCH
Confidence 45567899999984 489999998877655 456899999999999999999999999999 68999999999
Q ss_pred HHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 78 FHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 78 LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
||+|+.+|+.+++++|++.|++. +.+|.+|+||||+|++.|+.+++++|
T Consensus 107 Lh~A~~~g~~~~v~~Ll~~gad~----~~~d~~G~TpL~~A~~~g~~~iv~~L 155 (169)
T 4gpm_A 107 LHHAAENGHKEVVKLLISKGADV----NTSDSDGRTPLDLAREHGNEEVVKLL 155 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCc----cccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999999875 55999999999999999997766554
No 22
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.87 E-value=1.1e-22 Score=170.68 Aligned_cols=141 Identities=14% Similarity=0.135 Sum_probs=117.1
Q ss_pred HHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHH
Q 045240 6 NIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIA 81 (341)
Q Consensus 6 ~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~A 81 (341)
..+++|.|+.+ +++.|++.... +....|.+|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 79 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTEN----DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGDDTPLHLA 79 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTS----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcc----cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCCHHHHH
Confidence 45778888855 78888876322 2334567899999999999999999999999998 688999999999999
Q ss_pred HHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccC
Q 045240 82 ILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNY 161 (341)
Q Consensus 82 a~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~ 161 (341)
+.+|+.+++++|++.|.+. |.+|.+|+||||+|+..++.++++.| +..+++++.+|.
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~----~~~d~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~ 136 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKADI----NAVNEHGNVPLHYACFWGQDQVAEDL-------------------VANGALVSICNK 136 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCCSSBCCT
T ss_pred HHcCCHHHHHHHHHcCCCC----CccCCCCCCHHHHHHHcCCHHHHHHH-------------------HHCCCCcchhcc
Confidence 9999999999999999874 55899999999999999986654333 226888999999
Q ss_pred CCCChhHHHHHHH
Q 045240 162 DGKTPRELFTVEH 174 (341)
Q Consensus 162 ~G~Tpl~la~~~~ 174 (341)
+|+||+++|.+..
T Consensus 137 ~g~tpl~~A~~~~ 149 (179)
T 3f6q_A 137 YGEMPVDKAKAPL 149 (179)
T ss_dssp TSCCGGGGSCHHH
T ss_pred CCCCcHHHHHHHH
Confidence 9999999996543
No 23
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.87 E-value=3.8e-23 Score=183.60 Aligned_cols=154 Identities=16% Similarity=0.166 Sum_probs=120.7
Q ss_pred hHHHhhhhHHH-------HHHHHHHHHHHhcCChhh------HHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccc
Q 045240 4 SRNIELMNNQA-------LELVKCLWKEINRQQDVD------VAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHEL 70 (341)
Q Consensus 4 ~~~~~~lh~aa-------~~~v~~Ll~~~~~~~~~~------~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~ 70 (341)
..+.|++|+|+ .+++++|++.+.+.+... ....|.+|+||||+|+..|+.++++.|++.+++ ++.+
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~ 122 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQ 122 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCcc
Confidence 44889999999 569999999987754321 222345899999999999999999999999998 5777
Q ss_pred c--------------ccCCcHHHHHHHcCChhHHHHHHh---cCCcccchhhcccCCCCcHHHHHHHhCCCCCccccccc
Q 045240 71 D--------------ENGRSIFHIAILNRHMNVFNLIYE---QGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGA 133 (341)
Q Consensus 71 d--------------~~G~t~LH~Aa~~g~~~iv~~Ll~---~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~ 133 (341)
| ..|+||||+|+.+|+.+++++|++ .|.+. |.+|.+|+||||+|+..++...-
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~----~~~d~~g~TpLh~A~~~~~~~~~------ 192 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADL----RRQDSRGNTVLHALVAIADNTRE------ 192 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT----TCCCTTSCCHHHHHHHHCCSSHH------
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCC----cccCCCCCcHHHHHHHhccCchh------
Confidence 7 589999999999999999999999 77764 56999999999999998873210
Q ss_pred HHhhHHHhhhHHHHHHhh-CCcch-------hcccCCCCChhHHHHHH
Q 045240 134 ALEMQRELLIYKEVEMIV-QPSYR-------EMKNYDGKTPRELFTVE 173 (341)
Q Consensus 134 ~l~~~~~l~~~~~v~~l~-~~~~~-------~~~n~~G~Tpl~la~~~ 173 (341)
......+.++.++ .|+++ +.+|.+|+||+++|.+.
T Consensus 193 -----~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 193 -----NTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKT 235 (260)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred -----HHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHc
Confidence 0001123344444 45666 78999999999999764
No 24
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.87 E-value=1.5e-22 Score=179.39 Aligned_cols=154 Identities=20% Similarity=0.195 Sum_probs=121.0
Q ss_pred cchHHHhhhhHHHH-------HHHHHHHHHHhcCChhh------HHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccc
Q 045240 2 KCSRNIELMNNQAL-------ELVKCLWKEINRQQDVD------VAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVH 68 (341)
Q Consensus 2 k~~~~~~~lh~aa~-------~~v~~Ll~~~~~~~~~~------~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~ 68 (341)
++..++|++|+|+. +++++|++.+.+.+... ....|.+|.||||+|+..|+.++++.|++.+++ ++
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~ 117 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VH 117 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TT
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CC
Confidence 35678899999985 38999999998765322 112346799999999999999999999999998 57
Q ss_pred ccccc-------------CCcHHHHHHHcCChhHHHHHHh---cCCcccchhhcccCCCCcHHHHHHHh--CCCCCcccc
Q 045240 69 ELDEN-------------GRSIFHIAILNRHMNVFNLIYE---QGFNKQLLATYLDSCGNNILHLAAKY--RSPSPYRTV 130 (341)
Q Consensus 69 ~~d~~-------------G~t~LH~Aa~~g~~~iv~~Ll~---~~~~~~~l~n~~d~~G~TpLH~Aa~~--~~~~~v~~L 130 (341)
.+|.. |+||||+|+.+|+.+++++|++ .|++. |.+|.+|+||||+|+.. ++.+..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~----n~~d~~g~TpLh~A~~~~~~~~~~~~-- 191 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL----EATDSLGNTVLHALVMIADNSPENSA-- 191 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT----TCCCTTSCCHHHHHHHHCCSCHHHHH--
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc----CccCCCCCCHHHHHHHcccCCchhhH--
Confidence 77776 9999999999999999999999 78764 56999999999999994 4432000
Q ss_pred cccHHhhHHHhhhHHHHHHhh-CCcch-------hcccCCCCChhHHHHHH
Q 045240 131 SGAALEMQRELLIYKEVEMIV-QPSYR-------EMKNYDGKTPRELFTVE 173 (341)
Q Consensus 131 ~~~~l~~~~~l~~~~~v~~l~-~~~~~-------~~~n~~G~Tpl~la~~~ 173 (341)
...+.++.++ .++++ +.+|.+|+||+++|.+.
T Consensus 192 -----------~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 231 (256)
T 2etb_A 192 -----------LVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKE 231 (256)
T ss_dssp -----------HHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred -----------HHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHh
Confidence 0011233333 46667 89999999999999764
No 25
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.87 E-value=7.4e-23 Score=184.96 Aligned_cols=160 Identities=13% Similarity=0.043 Sum_probs=139.5
Q ss_pred cchHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcH
Q 045240 2 KCSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSI 77 (341)
Q Consensus 2 k~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~ 77 (341)
++..+.|++|+|+. ++++.|++++.+++.. +|+||||+|+..|+.++++.|++++++ ++.+|..|+||
T Consensus 27 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-------~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~ 98 (285)
T 3kea_A 27 ADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL-------ENEFPLHQAATLEDTKIVKILLFSGLD-DSQFDDKGNTA 98 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC-------TTCCHHHHHTTSSSCHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC-------CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcH
Confidence 45678899999985 6999999998876654 489999999999999999999999999 68899999999
Q ss_pred HHHHHHcCChhHHHHHHhcCCcccchhhcccCCC-CcHHHHHHHhCCCCCccccc------------ccHHhhHHHhhhH
Q 045240 78 FHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCG-NNILHLAAKYRSPSPYRTVS------------GAALEMQRELLIY 144 (341)
Q Consensus 78 LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G-~TpLH~Aa~~~~~~~v~~L~------------~~~l~~~~~l~~~ 144 (341)
||+|+.+|+.+++++|++.|++. +.+|.+| .||||+|+..|+.++++.|. .++++.+...+..
T Consensus 99 L~~A~~~g~~~~v~~Ll~~ga~~----~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~ 174 (285)
T 3kea_A 99 LYYAVDSGNMQTVKLFVKKNWRL----MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHV 174 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHHCGGG----GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHhcCCCC----CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChH
Confidence 99999999999999999999874 5589999 89999999999988776651 2567788888888
Q ss_pred HHHHHhh-CCcchhcccCCCCCh-hHHHHHH
Q 045240 145 KEVEMIV-QPSYREMKNYDGKTP-RELFTVE 173 (341)
Q Consensus 145 ~~v~~l~-~~~~~~~~n~~G~Tp-l~la~~~ 173 (341)
+.++.++ .+++++.+|.+|.|| +++|.+.
T Consensus 175 ~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~ 205 (285)
T 3kea_A 175 DMMILLLDYMTSTNTNNSLLFIPDIKLAIDN 205 (285)
T ss_dssp HHHHHHHHHHHHTCTTCCCBCCTTHHHHHHH
T ss_pred HHHHHHHHcCCCCCcccCCCCChHHHHHHHc
Confidence 8888887 689999999999998 9999764
No 26
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.87 E-value=2.7e-22 Score=178.71 Aligned_cols=159 Identities=18% Similarity=0.148 Sum_probs=136.4
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+..+.|++|+|+. ++++.|++++.+++. .|.+|.||||.|+..|+.++++.|++.+++. + .+.+|+|||
T Consensus 33 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L 105 (261)
T 2xai_A 33 TADHVSPLHEACLGGHLSCVKILLKHGAQVNG-----VTADWHTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASPI 105 (261)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-C-CCCCCCCHH
Confidence 4567899999985 599999999877654 3468999999999999999999999999884 3 456799999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc------------cccHHhhHHHhhhHHH
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV------------SGAALEMQRELLIYKE 146 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L------------~~~~l~~~~~l~~~~~ 146 (341)
|+|+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..|+.++++.| ..++++.+...+..+.
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~ 181 (261)
T 2xai_A 106 HEAARRGHVECVNSLIAYGGNI----DHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEEL 181 (261)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT----TCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCC----CcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHH
Confidence 9999999999999999999864 55899999999999999998877665 2367888888888888
Q ss_pred HHHhh-CCcchhcccCCCCChhHHHHH
Q 045240 147 VEMIV-QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 147 v~~l~-~~~~~~~~n~~G~Tpl~la~~ 172 (341)
++.++ .|++++.+|.+|+||+++|.+
T Consensus 182 v~~Ll~~gad~~~~d~~g~tpl~~A~~ 208 (261)
T 2xai_A 182 ACLLMDFGADTQAKNAEGKRPVELVPP 208 (261)
T ss_dssp HHHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred HHHHHHcCCCCCCcCCCCCChhhhccc
Confidence 88887 689999999999999999964
No 27
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.87 E-value=3.2e-22 Score=175.08 Aligned_cols=168 Identities=13% Similarity=0.060 Sum_probs=108.3
Q ss_pred chHHHhhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+-.+.|++|+|+ .++++.|++...+. ..++...|.+|.||||+|+..|+.++++.|++.+.+ ++.+|..|+|||
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l 83 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQG-GRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALDRHGQTAA 83 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhc-CCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHH
Confidence 455677777776 66677666632211 111122345677777777777777777777777766 466777777777
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc--------------cccHHhhHHHhhhH
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV--------------SGAALEMQRELLIY 144 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L--------------~~~~l~~~~~l~~~ 144 (341)
|+|+..|+.+++++|++.+......++.+|.+|+||||+|+..++.++++.| ..++++.+...+..
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~ 163 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL 163 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCH
Confidence 7777777777777777776533222355677777777777777766655443 12456666666666
Q ss_pred HHHHHhh-CCcchhcccCCCCChhHHHHH
Q 045240 145 KEVEMIV-QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 145 ~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 172 (341)
+.++.++ .+.+++.+|.+|.||+++|..
T Consensus 164 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 192 (241)
T 1k1a_A 164 SMVQLLLQHGANVNAQMYSGSSALHSASG 192 (241)
T ss_dssp HHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 6666665 566777777777777777754
No 28
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.87 E-value=3.6e-22 Score=173.90 Aligned_cols=162 Identities=17% Similarity=0.119 Sum_probs=135.9
Q ss_pred cchHHHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcH
Q 045240 2 KCSRNIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSI 77 (341)
Q Consensus 2 k~~~~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~ 77 (341)
+.....+++|.++.. .++.+++.... .....|.+|.||||.|+..|+.++++.|++.+.+ ++.+|..|+||
T Consensus 2 e~~~~~~~l~~A~~~g~~~~v~~ll~~~~~----~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~ 76 (231)
T 3aji_A 2 EGCVSNIMICNLAYSGKLDELKERILADKS----LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSP 76 (231)
T ss_dssp -CCCSSSHHHHHHHHTCHHHHHHHHHHCGG----GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCH
T ss_pred CCccccchHHHHHHhCCHHHHHHHHHhchh----hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCCCH
Confidence 445667899999954 77877776433 2334567899999999999999999999999988 68899999999
Q ss_pred HHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhH
Q 045240 78 FHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIY 144 (341)
Q Consensus 78 LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~ 144 (341)
||+|+..|+.+++++|++.|.+. +.+|.+|+||||+|+..++.++++.| ..++++.+...+..
T Consensus 77 L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 152 (231)
T 3aji_A 77 LHIAASAGXDEIVKALLVKGAHV----NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNL 152 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHHcCHHHHHHHHHHcCCCC----CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 99999999999999999999874 55899999999999999998877655 22567778777788
Q ss_pred HHHHHhh-CCcchhcccCCCCChhHHHHH
Q 045240 145 KEVEMIV-QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 145 ~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 172 (341)
+.++.++ .+.+++.+|.+|+||+++|.+
T Consensus 153 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 181 (231)
T 3aji_A 153 KMVHILLFYKASTNIQDTEGNTPLHLACD 181 (231)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred HHHHHHHhcCCCccccCCCCCCHHHHHHH
Confidence 8888777 688899999999999999865
No 29
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.87 E-value=6.4e-22 Score=173.15 Aligned_cols=168 Identities=18% Similarity=0.155 Sum_probs=140.2
Q ss_pred chHHHhhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCc---ccccccccCC
Q 045240 3 CSRNIELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPD---FVHELDENGR 75 (341)
Q Consensus 3 ~~~~~~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~---~~~~~d~~G~ 75 (341)
+..+.|++|+|+ .+++++|++.+.+.+.. |.+|.||||.|+..|+.++++.|++.++. .++..|..|+
T Consensus 43 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-----~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~ 117 (241)
T 1k1a_A 43 NNLRQTPLHLAVITTLPSVVRLLVTAGASPMAL-----DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGL 117 (241)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-----CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSC
T ss_pred cccCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-----CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCC
Confidence 445779999998 56999999988776543 46899999999999999999999999872 2678899999
Q ss_pred cHHHHHHHcCChhHHHHHHhcCCcccchhhccc-CCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHh
Q 045240 76 SIFHIAILNRHMNVFNLIYEQGFNKQLLATYLD-SCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQREL 141 (341)
Q Consensus 76 t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d-~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l 141 (341)
||||+|+..|+.+++++|++.|.+. +.+| .+|+||||+|+..|+.++++.| ..++++.+...
T Consensus 118 t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 193 (241)
T 1k1a_A 118 TALHVAVNTECQETVQLLLERGADI----DAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGR 193 (241)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCc----ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 9999999999999999999999874 4467 7899999999999998877665 23578888888
Q ss_pred hhHHHHHHhh-CCcchhcccCCCCChhHHHHHH-HHHHHH
Q 045240 142 LIYKEVEMIV-QPSYREMKNYDGKTPRELFTVE-HLELLR 179 (341)
Q Consensus 142 ~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~-~~~l~~ 179 (341)
+..+.++.++ .|++++.+|.+|+||+++|.+. +.+.++
T Consensus 194 ~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~ 233 (241)
T 1k1a_A 194 GLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 233 (241)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred CCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHh
Confidence 8888888887 6899999999999999998653 334443
No 30
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.87 E-value=5.9e-22 Score=173.22 Aligned_cols=161 Identities=21% Similarity=0.189 Sum_probs=138.4
Q ss_pred hHHHhhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHH
Q 045240 4 SRNIELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFH 79 (341)
Q Consensus 4 ~~~~~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH 79 (341)
..+.|++|+|+ .+++++|++.+.+.+.. |.+|.||||.|+..|+.++++.|++.++..++..|..|+||||
T Consensus 42 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-----~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~ 116 (237)
T 3b7b_A 42 EDQRTPLMEAAENNHLEAVKYLIKAGALVDPK-----DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMI 116 (237)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCC-----CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCC-----CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHH
Confidence 45678999998 45999999988776653 4589999999999999999999999986557889999999999
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHHH
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYKE 146 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~~ 146 (341)
+|+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..|+.++++.| ..++++.+...+..+.
T Consensus 117 ~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 192 (237)
T 3b7b_A 117 WATEYKHVDLVKLLLSKGSDI----NIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDC 192 (237)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCC----CccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhH
Confidence 999999999999999999874 55899999999999999998877655 2357888888888888
Q ss_pred HHHhh-CCcchhcccCCCCChhHHHHHH
Q 045240 147 VEMIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 147 v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
++.++ .+++++.+|++|+||+++|...
T Consensus 193 v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 220 (237)
T 3b7b_A 193 VVLFLSRDSDVTLKNKEGETPLQCASLN 220 (237)
T ss_dssp HHHHHTTTCCTTCCCTTSCCHHHHSCTT
T ss_pred HHHHHHcCCCCCccCCCCCCHHHHHHHH
Confidence 88887 6899999999999999999654
No 31
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.86 E-value=2.7e-22 Score=164.19 Aligned_cols=139 Identities=19% Similarity=0.176 Sum_probs=116.4
Q ss_pred HHHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHH
Q 045240 5 RNIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHI 80 (341)
Q Consensus 5 ~~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~ 80 (341)
+..+++|+|+.. .++.|++. ...+ ....|.+|.||||. +..|+.++++.|++.+++ ++.+|..|+||||+
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~-~~~~---~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHR-ELVH---PDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPVHD 74 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHT-TCCC---TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred CcchHHHHHHHhCCHHHHHHHHHh-hCcC---ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHH
Confidence 357899999855 88888877 3112 22345789999999 999999999999999998 68999999999999
Q ss_pred HHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhccc
Q 045240 81 AILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKN 160 (341)
Q Consensus 81 Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n 160 (341)
|+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..|+.++++ .++...+++.+|
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~--------------------~Ll~~~~~~~~~ 130 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEHGADV----NVPDGTGALPIHLAVQEGHTAVVS--------------------FLAAESDLHRRD 130 (156)
T ss_dssp HHHTTCHHHHHHHHHTTCCS----CCCCTTSCCHHHHHHHHTCHHHHH--------------------HHHTTSCTTCCC
T ss_pred HHHcCcHHHHHHHHHcCCCC----CCcCCCCCcHHHHHHHhChHHHHH--------------------HHHhccCCCCcC
Confidence 99999999999999999864 558999999999999999866443 334337889999
Q ss_pred CCCCChhHHHHHH
Q 045240 161 YDGKTPRELFTVE 173 (341)
Q Consensus 161 ~~G~Tpl~la~~~ 173 (341)
.+|.||+++|.+.
T Consensus 131 ~~g~t~l~~A~~~ 143 (156)
T 1bd8_A 131 ARGLTPLELALQR 143 (156)
T ss_dssp TTSCCHHHHHHHS
T ss_pred CCCCCHHHHHHHc
Confidence 9999999999764
No 32
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.86 E-value=4e-22 Score=169.86 Aligned_cols=160 Identities=16% Similarity=0.121 Sum_probs=109.9
Q ss_pred HHHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHH
Q 045240 5 RNIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHI 80 (341)
Q Consensus 5 ~~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~ 80 (341)
++.+++|+++.. .++.|++.+. .+....|.+|.||||+|++.|+.++++.|++.+++ ++.+|..|+||||+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~ 78 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTT----YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-INLQNSISDSPYLY 78 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTT----CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCC----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHH
Confidence 456777777744 5555555433 12223445778888888888888888888887777 57777788888888
Q ss_pred HHHcCChhHHHHHHhcC-CcccchhhcccCCCCcHHHHHHHhCCCCCccccc--------------ccHHhhHHHhhh--
Q 045240 81 AILNRHMNVFNLIYEQG-FNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVS--------------GAALEMQRELLI-- 143 (341)
Q Consensus 81 Aa~~g~~~iv~~Ll~~~-~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~--------------~~~l~~~~~l~~-- 143 (341)
|+.+|+.+++++|++.+ .+ ++.+|.+|+||||+|+..|+.++++.|. .++++.+.....
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~ 154 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPD----LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGN 154 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCC----TTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCS
T ss_pred HHHcCCHHHHHHHHhccCcc----cccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccch
Confidence 88888888888887443 33 2457777888888888877766655441 135555544333
Q ss_pred ---HHHHHHhh-CCcchhcccCCCCChhHHHHHH
Q 045240 144 ---YKEVEMIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 144 ---~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
.+.++.++ .+++++.+|.+|+||+++|.+.
T Consensus 155 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 188 (201)
T 3hra_A 155 QLYQDIVKLLMENGADQSIKDNSGRTAMDYANQK 188 (201)
T ss_dssp HHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc
Confidence 55666666 6888999999999999998754
No 33
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.86 E-value=1.8e-22 Score=166.12 Aligned_cols=138 Identities=17% Similarity=0.082 Sum_probs=116.5
Q ss_pred HHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHH
Q 045240 6 NIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIA 81 (341)
Q Consensus 6 ~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~A 81 (341)
..+++|.|+.. +++.|++++.+.+. .|.+|+||||.|+. |+.++++.|++.+++ ++.+|..|+||||+|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~-----~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNA-----QNGFGRTALQVMKL-GNPEIARRLLLRGAN-PDLKDRTGFAVIHDA 77 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTC-----CCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTSCCHHHHH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccc-----cCccCccHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCCCCHHHHH
Confidence 35889999854 88888887666544 45689999999999 999999999999988 688999999999999
Q ss_pred HHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcc-hhccc
Q 045240 82 ILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSY-REMKN 160 (341)
Q Consensus 82 a~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~-~~~~n 160 (341)
+.+|+.+++++|++.|.+. |.+|.+|+||||+|++.|+.++++.| +..+.+ .+.+|
T Consensus 78 ~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~g~~~~~~~~ 134 (162)
T 1ihb_A 78 ARAGFLDTLQTLLEFQADV----NIEDNEGNLPLHLAAKEGHLRVVEFL-------------------VKHTASNVGHRN 134 (162)
T ss_dssp HHHTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHHSCCCTTCCC
T ss_pred HHcCCHHHHHHHHHcCCCC----CCcCCCCCCHHHHHHHcCCHHHHHHH-------------------HHccCCCCCCcC
Confidence 9999999999999999864 55899999999999999986654433 113554 68999
Q ss_pred CCCCChhHHHHHH
Q 045240 161 YDGKTPRELFTVE 173 (341)
Q Consensus 161 ~~G~Tpl~la~~~ 173 (341)
.+|+||+++|.+.
T Consensus 135 ~~g~t~l~~A~~~ 147 (162)
T 1ihb_A 135 HKGDTACDLARLY 147 (162)
T ss_dssp TTSCCHHHHHHHT
T ss_pred CCCCcHHHHHHHc
Confidence 9999999999764
No 34
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.86 E-value=1.2e-21 Score=170.19 Aligned_cols=163 Identities=15% Similarity=0.117 Sum_probs=139.9
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhC--CcccccccccCCc
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSY--PDFVHELDENGRS 76 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~--~~~~~~~d~~G~t 76 (341)
+..+.|++|+|+. +++++|++.+.+.+.... .|..|.||||.|+..|+.++++.|++.+ ++ ++..|..|+|
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t 109 (228)
T 2dzn_A 33 DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDY--PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD-LNKITNQGVT 109 (228)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGC--CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc--CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-cccCCcCCCC
Confidence 4567899999984 699999999865554331 4578999999999999999999999998 66 6888999999
Q ss_pred HHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc--------------cccHHhhHHHhh
Q 045240 77 IFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV--------------SGAALEMQRELL 142 (341)
Q Consensus 77 ~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L--------------~~~~l~~~~~l~ 142 (341)
|||+|+..|+.+++++|++.|.+. +.+|.+|+||||+|+..|+.++++.| ..++++.+...+
T Consensus 110 ~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~ 185 (228)
T 2dzn_A 110 CLHLAVGKKWFEVSQFLIENGASV----RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCS----CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHhHHHHHHHcCCCc----cccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcC
Confidence 999999999999999999999874 55899999999999999998877655 124788888888
Q ss_pred hHHHHHHhh--CCcchhcccCCCCChhHHHHH
Q 045240 143 IYKEVEMIV--QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 143 ~~~~v~~l~--~~~~~~~~n~~G~Tpl~la~~ 172 (341)
..+.++.++ .|++++.+|.+|+||+++|.+
T Consensus 186 ~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 186 HGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp CHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred CHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 888888887 489999999999999999954
No 35
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.86 E-value=7.3e-22 Score=178.38 Aligned_cols=159 Identities=14% Similarity=0.093 Sum_probs=105.6
Q ss_pred cchHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcH
Q 045240 2 KCSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSI 77 (341)
Q Consensus 2 k~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~ 77 (341)
++..+.|++|+|+. ++++.|++.+.+++. +|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~ 128 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNI-----ITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTP 128 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCE-----ECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCH
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----cCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCH
Confidence 34566788888874 588888887766554 345788888888888888888888888777 57778888888
Q ss_pred HHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhH
Q 045240 78 FHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIY 144 (341)
Q Consensus 78 LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~ 144 (341)
||+|+..|+.+++++|++.|.+.+ .+.+|+||||+|+..|+.++++.| ..++++.+...+..
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~ 203 (285)
T 3d9h_A 129 LFNACVSGSWDCVNLLLQHGASVQ-----PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR 203 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSS-----CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH
T ss_pred HHHHHHcCHHHHHHHHHHCCCCCC-----CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 888888888888888887776533 234466666666666665555443 12355555555555
Q ss_pred HHHHHhh-CCcchhcccCCCCChhHHHHH
Q 045240 145 KEVEMIV-QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 145 ~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 172 (341)
+.++.++ .+++++ .|.+|.||+++|..
T Consensus 204 ~~v~~Ll~~ga~~~-~~~~g~t~L~~A~~ 231 (285)
T 3d9h_A 204 ACVKKLLESGADVN-QGKGQDSPLHAVVR 231 (285)
T ss_dssp HHHHHHHHTTCCTT-CCBTTBCHHHHHHH
T ss_pred HHHHHHHHCCCCCC-CCCCCCCHHHHHHH
Confidence 5555555 345554 25566666666643
No 36
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.86 E-value=2.4e-22 Score=179.95 Aligned_cols=155 Identities=17% Similarity=0.189 Sum_probs=120.7
Q ss_pred chHHHhhhhHHHH-------HHHHHHHHHHhcCChhh--H----HHHhcCCChHHHHHHHcCcHHHHHHHHHhCCccccc
Q 045240 3 CSRNIELMNNQAL-------ELVKCLWKEINRQQDVD--V----AEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHE 69 (341)
Q Consensus 3 ~~~~~~~lh~aa~-------~~v~~Ll~~~~~~~~~~--~----~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~ 69 (341)
+..+.|++|+|+. +++++|++.+.+.+... + ...|.+|.||||+|+..|+.++++.|++.+++ ++.
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~ 129 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQA 129 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCc
Confidence 4567899999994 59999999987754311 1 11456899999999999999999999999998 577
Q ss_pred ccc--------------cCCcHHHHHHHcCChhHHHHHHh---cCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccc
Q 045240 70 LDE--------------NGRSIFHIAILNRHMNVFNLIYE---QGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSG 132 (341)
Q Consensus 70 ~d~--------------~G~t~LH~Aa~~g~~~iv~~Ll~---~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~ 132 (341)
+|. .|+||||+|+.+|+.+++++|++ .|.+. |.+|.+|+||||+|+..|+...-.
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~----~~~d~~g~tpLh~A~~~~~~~~~~---- 201 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI----SARDSVGNTVLHALVEVADNTVDN---- 201 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT----TCCCTTSCCHHHHHHHHCCSCHHH----
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc----eeeCCCCCcHHHHHHHccCcchhH----
Confidence 776 79999999999999999999999 78764 559999999999999988743100
Q ss_pred cHHhhHHHhhhHHHHHHhh-CCcchh-------cccCCCCChhHHHHHH
Q 045240 133 AALEMQRELLIYKEVEMIV-QPSYRE-------MKNYDGKTPRELFTVE 173 (341)
Q Consensus 133 ~~l~~~~~l~~~~~v~~l~-~~~~~~-------~~n~~G~Tpl~la~~~ 173 (341)
.....+.++.++ .+++++ .+|.+|+||+++|.+.
T Consensus 202 -------~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 202 -------TKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp -------HHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred -------HHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 000012333344 455554 5899999999999754
No 37
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=2.7e-22 Score=160.84 Aligned_cols=114 Identities=20% Similarity=0.152 Sum_probs=100.8
Q ss_pred HhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHH
Q 045240 36 VIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNIL 115 (341)
Q Consensus 36 ~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpL 115 (341)
+|.+|+||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|.+. +.+|.+|+|||
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~L 80 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV----NTTGYQNDSPL 80 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCGGGCCHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc----cCcCCCCCCHH
Confidence 467899999999999999999999999988 6899999999999999999999999999999864 55899999999
Q ss_pred HHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHHH
Q 045240 116 HLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 116 H~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
|+|+..++.++++.| +..+++++.+|.+|+||+++|.+.
T Consensus 81 ~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~tpl~~A~~~ 119 (137)
T 3c5r_A 81 HDAAKNGHVDIVKLL-------------------LSYGASRNAVNIFGLRPVDYTDDE 119 (137)
T ss_dssp HHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCGGGGCCCH
T ss_pred HHHHHcCCHHHHHHH-------------------HHcCCCCCCCCCCCCCHHHHHhhc
Confidence 999999986654433 126888999999999999999643
No 38
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.86 E-value=4.5e-22 Score=173.50 Aligned_cols=134 Identities=18% Similarity=0.158 Sum_probs=115.3
Q ss_pred CCChHHHHHHHcCcHHHHHHHHHh-CCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccc-hhhcccCCCCcHHH
Q 045240 39 KPTNLLLDAAEVGNFRFLAELIGS-YPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQL-LATYLDSCGNNILH 116 (341)
Q Consensus 39 ~g~tpLh~Aa~~G~~~~v~~Ll~~-~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~-l~n~~d~~G~TpLH 116 (341)
.|+||||.|++.|+.++++.|++. +.+ ++.+|.+|+||||+|+.+|+.+++++|++.+.+... ..+.+|.+|+||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE-VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC-cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 589999999999999999999998 555 789999999999999999999999999999886421 12557889999999
Q ss_pred HHHHhCCCCCcccc--------------------------cccHHhhHHHhhhHHHHHHhh-CCcchhcccCCCCChhHH
Q 045240 117 LAAKYRSPSPYRTV--------------------------SGAALEMQRELLIYKEVEMIV-QPSYREMKNYDGKTPREL 169 (341)
Q Consensus 117 ~Aa~~~~~~~v~~L--------------------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~l 169 (341)
+|+..|+.++++.| ..++++.+...+..+.++.++ .+++++.+|.+|+||+++
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 160 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHI 160 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 99999998776554 225788888888888888887 689999999999999999
Q ss_pred HHHH
Q 045240 170 FTVE 173 (341)
Q Consensus 170 a~~~ 173 (341)
|...
T Consensus 161 A~~~ 164 (232)
T 2rfa_A 161 LILQ 164 (232)
T ss_dssp HHTC
T ss_pred HHHc
Confidence 9753
No 39
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=176.72 Aligned_cols=130 Identities=16% Similarity=0.031 Sum_probs=65.0
Q ss_pred hcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHH
Q 045240 37 IRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILH 116 (341)
Q Consensus 37 ~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH 116 (341)
|.+|+||||.|+..|+.++++.|++.+++ ++.+|.+|+||||+|+.+|+.+++++|++.|.+. +.+|.+|+||||
T Consensus 56 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~----~~~~~~g~t~L~ 130 (285)
T 3d9h_A 56 AVSDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV----NGVTADWHTPLF 130 (285)
T ss_dssp SCCSCCHHHHHHHTTCHHHHHHHHHTTCC-SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS----SCCCTTCCCHHH
T ss_pred CccCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC----CCCCCCCCCHHH
Confidence 34455555555555555555555555544 3455555555555555555555555555554432 234555555555
Q ss_pred HHHHhCCCCCcccc------------cccHHhhHHHhhhHHHHHHhh-CCcchhcccCCCCChhHHHH
Q 045240 117 LAAKYRSPSPYRTV------------SGAALEMQRELLIYKEVEMIV-QPSYREMKNYDGKTPRELFT 171 (341)
Q Consensus 117 ~Aa~~~~~~~v~~L------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~ 171 (341)
+|+..|+.++++.| ..++++.+...+..+.++.++ .+.+++.+|.+|.||+++|.
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 198 (285)
T 3d9h_A 131 NACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLAC 198 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHH
T ss_pred HHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 55555554444333 113344444444444444444 34455555555555555554
No 40
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.86 E-value=1.3e-21 Score=182.47 Aligned_cols=160 Identities=14% Similarity=0.044 Sum_probs=101.2
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCccccc---------
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHE--------- 69 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~--------- 69 (341)
+-.+.|++|+|+. +++++|++++.+++. .|.+|.||||+|+..|+.++++.|++.+++. +.
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-----~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~g~t~L~~ 90 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIETGVSPTI-----QNRFGCTALHLACKFGCVDTAKYLASVGEVH-SLWHGQKPIHL 90 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-----CCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC-CCBTTBCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-----cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc-cccCCCCHHHH
Confidence 4567788888874 488888887766544 3456778888888888888888887777642 11
Q ss_pred -------------------------------------------ccccCCcHHHHHHHcC--ChhHHHHHHhcCCcccchh
Q 045240 70 -------------------------------------------LDENGRSIFHIAILNR--HMNVFNLIYEQGFNKQLLA 104 (341)
Q Consensus 70 -------------------------------------------~d~~G~t~LH~Aa~~g--~~~iv~~Ll~~~~~~~~l~ 104 (341)
.|..|+||||+|+.+| +.+++++|++.|++.
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~---- 166 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP---- 166 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT----
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC----
Confidence 4555666666666666 666666666666543
Q ss_pred hcccCCCCcHHHHHHHhCCCCCccccc------------------ccHHhhHHHhhhHHHHHHhh-CCcchhcccCCCCC
Q 045240 105 TYLDSCGNNILHLAAKYRSPSPYRTVS------------------GAALEMQRELLIYKEVEMIV-QPSYREMKNYDGKT 165 (341)
Q Consensus 105 n~~d~~G~TpLH~Aa~~~~~~~v~~L~------------------~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~T 165 (341)
|.+|.+|+||||+|+..|+.++++.|. .++++.+...+..+.++.++ .|++++.+|.+|+|
T Consensus 167 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~t 246 (364)
T 3ljn_A 167 TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTV 246 (364)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 335666666666666666655544331 13455555555556666555 46666666666666
Q ss_pred hhHHHHH
Q 045240 166 PRELFTV 172 (341)
Q Consensus 166 pl~la~~ 172 (341)
|+++|.+
T Consensus 247 pL~~A~~ 253 (364)
T 3ljn_A 247 PLYLSVR 253 (364)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666654
No 41
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.85 E-value=8.9e-22 Score=174.43 Aligned_cols=144 Identities=19% Similarity=0.129 Sum_probs=117.6
Q ss_pred HHHhhhhHHHHH--------HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHc---CcHHHHHHHHHhCCcccc-----
Q 045240 5 RNIELMNNQALE--------LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEV---GNFRFLAELIGSYPDFVH----- 68 (341)
Q Consensus 5 ~~~~~lh~aa~~--------~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~---G~~~~v~~Ll~~~~~~~~----- 68 (341)
+++|++|+|+.. ++++|++.+.+++.... ..|.+|+||||+|+.. |+.++++.|++.+++...
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~-~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAY-TEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGG-SBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccc-cCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 468999999965 67777778877765221 2467899999999999 999999999998776311
Q ss_pred -----cccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCC-------------CCcHHHHHHHhCCCCCcccc
Q 045240 69 -----ELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSC-------------GNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 69 -----~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~-------------G~TpLH~Aa~~~~~~~v~~L 130 (341)
..|..|+||||+|+.+|+.+++++|++.|++. |.+|.+ |+||||+|+..|+.++++.|
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~----~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L 155 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV----HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYL 155 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC----CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 23478999999999999999999999999874 446665 99999999999997655444
Q ss_pred cccHHhhHHHhhhHHHHHHhh---CCcchhcccCCCCChhHHHHH
Q 045240 131 SGAALEMQRELLIYKEVEMIV---QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 131 ~~~~l~~~~~l~~~~~v~~l~---~~~~~~~~n~~G~Tpl~la~~ 172 (341)
+. .+++++.+|.+|+||+|+|..
T Consensus 156 -------------------l~~~~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 156 -------------------LENPHQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp -------------------HHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred -------------------HhccccCCCcCccCCCCCCHHHHHHH
Confidence 23 578899999999999999976
No 42
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.85 E-value=1.4e-21 Score=173.38 Aligned_cols=146 Identities=18% Similarity=0.151 Sum_probs=118.8
Q ss_pred chHHHhhhhHHHHH--------HHHHHHHHHhcCChhhHHHHhcCCChHHHHHH---HcCcHHHHHHHHHhCCcc-----
Q 045240 3 CSRNIELMNNQALE--------LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAA---EVGNFRFLAELIGSYPDF----- 66 (341)
Q Consensus 3 ~~~~~~~lh~aa~~--------~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa---~~G~~~~v~~Ll~~~~~~----- 66 (341)
+.++++++|.|+.+ +++++.+.+.+.+..+. ..|.+|+||||+|+ +.|+.++++.|++.+++.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~-~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEF-REPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGG-SCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhh-hccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 35688999999976 56666668777776552 33567999999999 789999999999986431
Q ss_pred -----cccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhccc--------------CCCCcHHHHHHHhCCCCCc
Q 045240 67 -----VHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLD--------------SCGNNILHLAAKYRSPSPY 127 (341)
Q Consensus 67 -----~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d--------------~~G~TpLH~Aa~~~~~~~v 127 (341)
.+..|..|+||||+|+.+|+.+++++|++.|++.+ .+| .+|+||||+|+..|+.+++
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 156 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH----AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIV 156 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHH
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC----ccccccccCcccccccccCCCCHHHHHHHcCCHHHH
Confidence 34456699999999999999999999999998754 466 6899999999999997655
Q ss_pred ccccccHHhhHHHhhhHHHHHHhh---CCcchhcccCCCCChhHHHHH
Q 045240 128 RTVSGAALEMQRELLIYKEVEMIV---QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 128 ~~L~~~~l~~~~~l~~~~~v~~l~---~~~~~~~~n~~G~Tpl~la~~ 172 (341)
+.| +. .+++++.+|.+|+||+|+|..
T Consensus 157 ~~L-------------------l~~~~~ga~~~~~d~~g~TpLh~A~~ 185 (260)
T 3jxi_A 157 HYL-------------------TENGHKQADLRRQDSRGNTVLHALVA 185 (260)
T ss_dssp HHH-------------------HHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred HHH-------------------HhccccCCCCcccCCCCCcHHHHHHH
Confidence 444 23 578899999999999999985
No 43
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.85 E-value=9.2e-22 Score=154.82 Aligned_cols=111 Identities=17% Similarity=0.120 Sum_probs=96.8
Q ss_pred hcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHH
Q 045240 37 IRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILH 116 (341)
Q Consensus 37 ~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH 116 (341)
+..|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.|.+. |.+|.+|+||||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~d~~g~tpL~ 78 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI----NAPDKHHITPLL 78 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT----TCCCTTSCCHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC----CcCCCCCCCHHH
Confidence 35689999999999999999999999998 6899999999999999999999999999999874 559999999999
Q ss_pred HHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHH
Q 045240 117 LAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFT 171 (341)
Q Consensus 117 ~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~ 171 (341)
+|+..++.++++.| +..+++++.+|.+|+||+++|.
T Consensus 79 ~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 79 SAVYEGHVSCVKLL-------------------LSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHCC
T ss_pred HHHHcCCHHHHHHH-------------------HHcCCCCCCcCCCCCCHHHHhC
Confidence 99999986654433 2267889999999999999984
No 44
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.85 E-value=6.1e-22 Score=178.18 Aligned_cols=133 Identities=14% Similarity=0.103 Sum_probs=70.6
Q ss_pred hcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHH-----HcCChhHHHHHHhcCCcccchhhcccCCC
Q 045240 37 IRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAI-----LNRHMNVFNLIYEQGFNKQLLATYLDSCG 111 (341)
Q Consensus 37 ~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa-----~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G 111 (341)
|.+|+||||+|+..|+.++++.|++.++..++..|..|+||||+|+ ..++.+++++|++.|.+. +..|.+|
T Consensus 108 d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~----~~~~~~g 183 (276)
T 4hbd_A 108 DSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN----AKASQAG 183 (276)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT----CCCTTTC
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc----cccCCCC
Confidence 3455555555555555555555555555224444444444444444 333444444444444321 2234444
Q ss_pred CcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHHHHHHhh--CCcchhcccCCCCChhHHHHHH
Q 045240 112 NNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYKEVEMIV--QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 112 ~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~~v~~l~--~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
+||||+|+..|+.++++.| ..++++.+...+..+.++.++ .+++++.+|.+|+||+++|.+.
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDA 260 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHc
Confidence 4444444444444433332 012344444444444555555 4889999999999999999765
No 45
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.85 E-value=3.5e-22 Score=184.09 Aligned_cols=132 Identities=14% Similarity=0.101 Sum_probs=85.7
Q ss_pred hcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCC---hhHHHHHHhcCCcccchhhcccCCCCc
Q 045240 37 IRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRH---MNVFNLIYEQGFNKQLLATYLDSCGNN 113 (341)
Q Consensus 37 ~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~---~~iv~~Ll~~~~~~~~l~n~~d~~G~T 113 (341)
|.+|+||||+|+..|+.++++.|++++++ ++.+|.+|+||||+|+.+|+ .++++.|++.+.. .++.+|.+|+|
T Consensus 128 d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~---~~~~~d~~g~t 203 (327)
T 1sw6_A 128 DEHGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---CLILEDSMNRT 203 (327)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---GGGEECTTCCC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhc---cccCCCCCCCC
Confidence 34666666666666666666666666666 46666666666666666666 4555555555421 12446666666
Q ss_pred HHHHHHH----hCCCCCcccc----------------------------------------------------------c
Q 045240 114 ILHLAAK----YRSPSPYRTV----------------------------------------------------------S 131 (341)
Q Consensus 114 pLH~Aa~----~~~~~~v~~L----------------------------------------------------------~ 131 (341)
|||+|+. .|+.++++.| .
T Consensus 204 pLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G 283 (327)
T 1sw6_A 204 ILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNG 283 (327)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTS
T ss_pred HHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCC
Confidence 6666665 4443333221 1
Q ss_pred ccHHhhHHHhhhHHHHHHhh-CCcchhcccCCCCChhHHHHH
Q 045240 132 GAALEMQRELLIYKEVEMIV-QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 132 ~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 172 (341)
.++++.+...+..+.++.++ .|++++.+|.+|+||+|+|.+
T Consensus 284 ~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 284 DTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp CCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 24666666666677777777 789999999999999999853
No 46
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.85 E-value=7.1e-22 Score=173.80 Aligned_cols=137 Identities=18% Similarity=0.145 Sum_probs=95.9
Q ss_pred hHHHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHH
Q 045240 4 SRNIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFH 79 (341)
Q Consensus 4 ~~~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH 79 (341)
+.++|++|.++.. .++.|++++.+.+.. ..|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~------~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~ 75 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN------PLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITALH 75 (239)
T ss_dssp ----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC------chhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHH
Confidence 5678999999854 788888888877632 4689999999999999999999999998 6899999999999
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcc
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMK 159 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~ 159 (341)
+|+.+|+.+++++|++.|++. |.+|.+|+||||+|+..|+.++++.| +..+++++.+
T Consensus 76 ~A~~~g~~~~v~~Ll~~ga~~----~~~d~~g~tpL~~A~~~~~~~~v~~L-------------------l~~ga~~~~~ 132 (239)
T 1ycs_B 76 NAVCAGHTEIVKFLVQFGVNV----NAADSDGWTPLHCAASCNNVQVCKFL-------------------VESGAAVFAM 132 (239)
T ss_dssp HHHHHTCHHHHHHHHHHTCCT----TCCCTTCCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHcCCCC----CccCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCccee
Confidence 999999999999999999874 56999999999999999996654433 2268889999
Q ss_pred cCCCC-ChhHHH
Q 045240 160 NYDGK-TPRELF 170 (341)
Q Consensus 160 n~~G~-Tpl~la 170 (341)
|.+|. ||+++|
T Consensus 133 ~~~~~~t~l~~a 144 (239)
T 1ycs_B 133 TYSDMQTAADKC 144 (239)
T ss_dssp CSSSCCCHHHHC
T ss_pred cCCCCcchHHHH
Confidence 98877 999998
No 47
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.85 E-value=3.5e-21 Score=183.76 Aligned_cols=161 Identities=17% Similarity=0.176 Sum_probs=133.6
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+-.+.|++|+|+. +++++|++++.+++.. |.+|.||||.|++.|+.++++.|++.+++ ++.+|.+|+|||
T Consensus 11 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~-----~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L 84 (437)
T 1n11_A 11 GESGLTPLHVASFMGHLPIVKNLLQRGASPNVS-----NVKVETPLHMAARAGHTEVAKYLLQNKAK-VNAKAKDDQTPL 84 (437)
T ss_dssp ----CCHHHHHHHHTCHHHHHHHHHTTCCSCCS-----SSCCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCC-----CCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHH
Confidence 3457899999995 5999999998776654 45899999999999999999999999988 688999999999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHH
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYK 145 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~ 145 (341)
|+|+..|+.+++++|++.|++. +.+|..|+||||+|+..|+.++++.| ..++++.+...+..+
T Consensus 85 ~~A~~~g~~~~v~~Ll~~ga~~----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~ 160 (437)
T 1n11_A 85 HCAARIGHTNMVKLLLENNANP----NLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR 160 (437)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCT----TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHCCCHHHHHHHHhCCCCC----CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999875 44899999999999999988776554 124777777777788
Q ss_pred HHHHhh-CCcchhcccCCCCChhHHHHHH
Q 045240 146 EVEMIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 146 ~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
.++.++ .+.+++..+.+|.||++.|...
T Consensus 161 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 189 (437)
T 1n11_A 161 VAELLLERDAHPNAAGKNGLTPLHVAVHH 189 (437)
T ss_dssp HHHHHHHTTCCTTCCCSSCCCHHHHHHHT
T ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Confidence 888777 6788888888999999988653
No 48
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.84 E-value=1.4e-21 Score=175.31 Aligned_cols=135 Identities=17% Similarity=0.135 Sum_probs=94.0
Q ss_pred HHHhcCCChHHHHHHHcCcHH-HHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCC
Q 045240 34 AEVIRKPTNLLLDAAEVGNFR-FLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGN 112 (341)
Q Consensus 34 ~~~~~~g~tpLh~Aa~~G~~~-~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~ 112 (341)
...|.+|.||||.|+..|+.+ +++.|++.+.+ ++.+|.+|+||||+|+.+|+.+++++|++.+++. +.+|.+|.
T Consensus 46 ~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~----~~~~~~g~ 120 (269)
T 4b93_B 46 SAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG-VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA----GARNADQA 120 (269)
T ss_dssp -----------------------------CCCC-TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT----TCCCTTCC
T ss_pred cccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc----CccCCCCC
Confidence 345678999999999988764 78999999998 6899999999999999999999999999999875 44899999
Q ss_pred cHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHHHHHHhh-CCcchhcccCCCCChhHHHHHH
Q 045240 113 NILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYKEVEMIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 113 TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
||+|+|+..++.++++.| ..++++.+...+..+.++.++ .|++++.+|.+|.||+++|...
T Consensus 121 t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~ 195 (269)
T 4b93_B 121 VPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195 (269)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHT
T ss_pred CccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHc
Confidence 999999999988776654 235788888888888888877 6899999999999999999753
No 49
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.84 E-value=3.6e-21 Score=183.68 Aligned_cols=158 Identities=16% Similarity=0.159 Sum_probs=108.9
Q ss_pred HHhhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHH
Q 045240 6 NIELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIA 81 (341)
Q Consensus 6 ~~~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~A 81 (341)
+.+++|+++ .++++.|++.+.+.+. .+.+|.||||.|+..|+.++++.|++++++ ++..|..|+||||+|
T Consensus 212 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A 285 (437)
T 1n11_A 212 GYTPLHIAAKQNQVEVARSLLQYGGSANA-----ESVQGVTPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLV 285 (437)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----CCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC-----CCCCCCCHHHHHHHCCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHH
Confidence 445666665 2366666665554433 234677777777777777777777777776 466777777777777
Q ss_pred HHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHHHHH
Q 045240 82 ILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYKEVE 148 (341)
Q Consensus 82 a~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~~v~ 148 (341)
+..|+.+++++|++.|.+. |.+|..|+||||+|+..|+.++++.| ..++++.+...+..+.++
T Consensus 286 ~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~ 361 (437)
T 1n11_A 286 AQEGHVPVADVLIKHGVMV----DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVT 361 (437)
T ss_dssp HHHTCHHHHHHHHHHTCCT----TCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHHHhCCccC----CCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHH
Confidence 7777777777777777653 44777788888888887777766655 124666666666777777
Q ss_pred Hhh-CCcchhcccCCCCChhHHHHHH
Q 045240 149 MIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 149 ~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
.++ .|++++.+|.+|+||+++|.+.
T Consensus 362 ~Ll~~ga~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 362 LLLKNGASPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp HHHHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred HHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 666 5777777888888888877543
No 50
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.84 E-value=1e-20 Score=174.42 Aligned_cols=167 Identities=19% Similarity=0.150 Sum_probs=126.1
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcc------------
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDF------------ 66 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~------------ 66 (341)
...+.|+||.|+. ++|++|+++|.+++..+ +..|+||||+|++.|+.++++.|++++++.
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~----~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~ 97 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQE----EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFI 97 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCC----TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccC----CCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhH
Confidence 3567899999985 59999999998877543 245899999999999999999999987652
Q ss_pred --------------------cccccccCCcHHHHHHHcCChhHHHHHHhcCCcccch------hhcccCCCCcHHHHHHH
Q 045240 67 --------------------VHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLL------ATYLDSCGNNILHLAAK 120 (341)
Q Consensus 67 --------------------~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l------~n~~d~~G~TpLH~Aa~ 120 (341)
++.+|..|+||||+|+..|+.++++++++.|++.+.. .+..+..|.||||+|++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~ 177 (337)
T 4g8k_A 98 LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 177 (337)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHH
T ss_pred HHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHH
Confidence 3567888999999999999999999999998865431 13356789999999999
Q ss_pred hCCCCCccccc---cc-----------HHhhHHHh---hhHH-HHHHhh-CCcchhcccCCCCChhHHHHHH
Q 045240 121 YRSPSPYRTVS---GA-----------ALEMQREL---LIYK-EVEMIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 121 ~~~~~~v~~L~---~~-----------~l~~~~~l---~~~~-~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
.|+.++++.|. |+ +++..... ...+ .++.++ +|++++.+|.+|+||+++|.+.
T Consensus 178 ~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~ 249 (337)
T 4g8k_A 178 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEK 249 (337)
T ss_dssp HTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHT
T ss_pred CCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHh
Confidence 99998887662 22 22211111 1112 334444 6888899999999999988653
No 51
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.84 E-value=6.4e-22 Score=173.23 Aligned_cols=167 Identities=14% Similarity=0.072 Sum_probs=107.0
Q ss_pred hHHHhhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHH
Q 045240 4 SRNIELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFH 79 (341)
Q Consensus 4 ~~~~~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH 79 (341)
..+.|++|+|+ .++++.|++.+... ..++...|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||
T Consensus 6 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~ 83 (236)
T 1ikn_D 6 EDGDSFLHLAIIHEEKALTMEVIRQVKGD-LAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PELRDFRGNTPLH 83 (236)
T ss_dssp -CCCCTTHHHHHTTCSSSSSCCCC------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCCCCTTCCCHHH
T ss_pred CCCCchhHHHHHcCChhHHHHHHHHhhcc-HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHH
Confidence 34566777776 55566665554421 001112345677777777777777777777777666 4667777777777
Q ss_pred HHHHcCChhHHHHHHhcCCccc--chhhcccCCCCcHHHHHHHhCCCCCcccc--------------cccHHhhHHHhhh
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQ--LLATYLDSCGNNILHLAAKYRSPSPYRTV--------------SGAALEMQRELLI 143 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~--~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L--------------~~~~l~~~~~l~~ 143 (341)
+|+.+|+.+++++|++.+.+.. ..++.+|..|+||||+|+..|+.++++.| ..++++.+...+.
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~ 163 (236)
T 1ikn_D 84 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN 163 (236)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 7777777777777777665321 12355666777777777777766655443 1245666666666
Q ss_pred HHHHHHhh-CCcchhcccCCCCChhHHHHH
Q 045240 144 YKEVEMIV-QPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 144 ~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 172 (341)
.+.++.++ .|++++.+|.+|.||+++|.+
T Consensus 164 ~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 193 (236)
T 1ikn_D 164 PDLVSLLLKCGADVNRVTYQGYSPYQLTWG 193 (236)
T ss_dssp HHHHHHHHTTTCCSCCCCTTCCCGGGGCTT
T ss_pred HHHHHHHHHcCCCCCcccCCCCCHHHHHHc
Confidence 66777776 689999999999999999964
No 52
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.84 E-value=8.3e-21 Score=169.60 Aligned_cols=161 Identities=14% Similarity=0.099 Sum_probs=136.5
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
++.+.+++|+|+. ++++.|++.+.+.+... +..|+||||+|++.|+.++++.|++.+++ ++.+|..|+|||
T Consensus 2 ~~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L 76 (285)
T 1wdy_A 2 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQE----EEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPF 76 (285)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCC----TTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHH
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHcCCCccccc----CCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHH
Confidence 3578899999984 59999999887766432 46789999999999999999999999988 688999999999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCccccc-----------------------ccHH
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVS-----------------------GAAL 135 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~-----------------------~~~l 135 (341)
|+|+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..|+.++++.|. .+++
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L 152 (285)
T 1wdy_A 77 LLAAIAGSVKLLKLFLSKGADV----NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATAL 152 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT----TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCC----CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHH
Confidence 9999999999999999999864 558999999999999999987766541 1567
Q ss_pred hhHHHhhhHHHHHHhh-C-CcchhcccCCCCChhHHHHH
Q 045240 136 EMQRELLIYKEVEMIV-Q-PSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 136 ~~~~~l~~~~~v~~l~-~-~~~~~~~n~~G~Tpl~la~~ 172 (341)
+.+...+..+.++.++ . +.+++.+|.+|.||++.|..
T Consensus 153 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 191 (285)
T 1wdy_A 153 MDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 191 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 7777777788888877 3 88888999999999998864
No 53
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.84 E-value=3.9e-22 Score=163.69 Aligned_cols=136 Identities=13% Similarity=0.026 Sum_probs=100.1
Q ss_pred HHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCc-HHH
Q 045240 5 RNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRS-IFH 79 (341)
Q Consensus 5 ~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t-~LH 79 (341)
.+.+++|+|+. +++++|++++.+++. .|.+|+||||+|+ .|+.++++.|++.+.+ ++.+|..|+| |||
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~ttpL~ 83 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPNA-----PNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPVH 83 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTC-----CCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHHH
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCCC-----CCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcHHHH
Confidence 35789999985 489999988776554 4568999999985 9999999999999988 6899999999 999
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcc
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMK 159 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~ 159 (341)
+|+.+|+.+++++|++.|++. +.+|.+|+||||+|+..|+.++++.| +..|++++.+
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~----~~~d~~g~tpl~~A~~~~~~~~v~~L-------------------l~~ga~~~~~ 140 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARL----DVRDAWGRLPVDLAEELGHRDVARYL-------------------RAAAGGTRGS 140 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCS----SCCCTTCCCHHHHHHHHTCHHHHHHH-------------------SSCC------
T ss_pred HHHHCCCHHHHHHHHHcCCCC----cccCCCCCCHHHHHHHhCHHHHHHHH-------------------HHcCCCCCcc
Confidence 999999999999999999874 55899999999999999986654433 1268889999
Q ss_pred cCCCCChhHHH
Q 045240 160 NYDGKTPRELF 170 (341)
Q Consensus 160 n~~G~Tpl~la 170 (341)
|..|.||.+-.
T Consensus 141 ~~~g~t~~~~~ 151 (156)
T 1bi7_B 141 NHARIDAAEGP 151 (156)
T ss_dssp -----------
T ss_pred CcCcCcccccC
Confidence 99999987743
No 54
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.84 E-value=4.8e-21 Score=176.44 Aligned_cols=119 Identities=20% Similarity=0.142 Sum_probs=99.9
Q ss_pred chHHHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+-++.+++|.++.. .++.+++. ...+...+|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+|||
T Consensus 21 ~~~~~~~L~~A~~~g~~~~v~~ll~~----~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L 95 (351)
T 3utm_A 21 GEYKKDELLEAARSGNEEKLMALLTP----LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPL 95 (351)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHCCT----TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHH
T ss_pred ccccchhHHHHHHcCCHHHHHHHHHh----cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHH
Confidence 34678999999976 45444432 2223334567899999999999999999999999998 689999999999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
|+|+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..|+.++++.|
T Consensus 96 ~~A~~~g~~~iv~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~~~~v~~L 143 (351)
T 3utm_A 96 HNACSYGHYEVTELLLKHGACV----NAMDLWQFTPLHEAASKNRVEVCSLL 143 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT----TCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHCCCCC----CCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9999999999999999999874 55899999999999999998877665
No 55
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.84 E-value=1.9e-21 Score=161.78 Aligned_cols=135 Identities=16% Similarity=0.096 Sum_probs=109.2
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+..+.|++|+|+. +++++|++++.+.+.. |.+|.||||+|+..|+.++++.|++++++ ++.+|..|+|||
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 106 (172)
T 3v30_A 33 DERGFTPLIWASAFGEIETVRFLLEWGADPHIL-----AKERESALSLASTGGYTDIVGLLLERDVD-INIYDWNGGTPL 106 (172)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC-----CTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhh-----cccCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHH
Confidence 4567899999984 5999999998876653 46899999999999999999999999998 689999999999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhc
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREM 158 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~ 158 (341)
|+|+.+|+.+++++|++.|++. +.+|.+|+||||+|+..++.++++.|. ..+.+...
T Consensus 107 ~~A~~~~~~~~v~~Ll~~ga~~----~~~~~~g~t~l~~A~~~~~~~~~~~L~-------------------~~~~~~~~ 163 (172)
T 3v30_A 107 LYAVRGNHVKCVEALLARGADL----TTEADSGYTPMDLAVALGYRKVQQVIE-------------------NHILKLFQ 163 (172)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHHTCHHHHHHHH-------------------HHHHHHSC
T ss_pred HHHHHcCCHHHHHHHHHcCCCc----cccCCCCCCHHHHHHHhCcHHHHHHHH-------------------HHHHHHhc
Confidence 9999999999999999999874 558999999999999999977655441 13445667
Q ss_pred ccCCCCCh
Q 045240 159 KNYDGKTP 166 (341)
Q Consensus 159 ~n~~G~Tp 166 (341)
+|..|.||
T Consensus 164 ~~~~~~~p 171 (172)
T 3v30_A 164 SNLVPADP 171 (172)
T ss_dssp C-------
T ss_pred ccCCCCCC
Confidence 77788877
No 56
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.84 E-value=1.1e-21 Score=157.16 Aligned_cols=114 Identities=17% Similarity=0.149 Sum_probs=99.8
Q ss_pred HHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCC-CCc
Q 045240 35 EVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSC-GNN 113 (341)
Q Consensus 35 ~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~-G~T 113 (341)
..|.+|.||||.|++.|+.++++.|++.+++ ++.+|..|+||||+|+. |+.+++++|++.|.+. +.+|.+ |+|
T Consensus 7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~----~~~~~~~g~t 80 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP----NCADPATLTR 80 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS----SCCBTTTTBC
T ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC----CCcCCCCCCC
Confidence 3567899999999999999999999999988 68899999999999999 9999999999999874 558998 999
Q ss_pred HHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHHH
Q 045240 114 ILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 114 pLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
|||+|+..|+.++++.| +..+++++.+|.+|+||+++|.+.
T Consensus 81 ~L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~d~~g~tpl~~A~~~ 121 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVL-------------------HRAGARLDVCDAWGRLPVDLAEEQ 121 (136)
T ss_dssp HHHHHHHHTCHHHHHHH-------------------HHTCCCCCCCSSSSSCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHH-------------------HHcCCCCCccCCCCCCHHHHHHHc
Confidence 99999999986654433 226788999999999999999764
No 57
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.84 E-value=1.4e-20 Score=163.96 Aligned_cols=161 Identities=19% Similarity=0.208 Sum_probs=111.4
Q ss_pred hHHHhhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHH
Q 045240 4 SRNIELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFH 79 (341)
Q Consensus 4 ~~~~~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH 79 (341)
..+.+++|+|+ .+++++|++.+.+.+... +..|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||
T Consensus 40 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~ 114 (240)
T 3eu9_A 40 KENVTLLHWAAINNRIDLVKYYISKGAIVDQLG----GDLNSTPLHWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIH 114 (240)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB----TTTTBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc----CCcCCChhHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHH
Confidence 34556777765 346777776665544322 23467777777777777777777777776 4667777778888
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCC-CCCcccc--------------cccHHhhHHHhhhH
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRS-PSPYRTV--------------SGAALEMQRELLIY 144 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~-~~~v~~L--------------~~~~l~~~~~l~~~ 144 (341)
+|+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..++ .++++.| ..++++.+...+..
T Consensus 115 ~A~~~~~~~~~~~Ll~~~~~~----~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 190 (240)
T 3eu9_A 115 LAAQFGHTSIVAYLIAKGQDV----DMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNT 190 (240)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCH
T ss_pred HHHHcCHHHHHHHHHhcCCCc----cccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCH
Confidence 888877778888777777653 4477788888888886665 4444333 12467777777777
Q ss_pred HHHHHhh-CCcchhcccCCCCChhHHHHHH
Q 045240 145 KEVEMIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 145 ~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
+.++.++ .+++++.+|.+|+||+++|.+.
T Consensus 191 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 220 (240)
T 3eu9_A 191 TVISLLLEAGANVDAQNIKGESALDLAKQR 220 (240)
T ss_dssp HHHHHHHHHTCCTTCBCTTSCBHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 7777776 5788888888888888888654
No 58
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.83 E-value=3.7e-21 Score=154.13 Aligned_cols=113 Identities=21% Similarity=0.217 Sum_probs=94.4
Q ss_pred hcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHH
Q 045240 37 IRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILH 116 (341)
Q Consensus 37 ~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH 116 (341)
...|.||||.|++.|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.|.+. |.+|.+|+||||
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~d~~g~t~L~ 85 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV----NAVDAIGFTPLH 85 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTCCCHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CcCCCCCCCHHH
Confidence 35578999999999999999999999888 5888999999999999999999999999998864 558899999999
Q ss_pred HHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHHH
Q 045240 117 LAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 117 ~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
+|+..|+.++++.| +..+++++.+|.+|+||+++|.+.
T Consensus 86 ~A~~~~~~~~v~~L-------------------l~~g~~~~~~~~~g~tpl~~A~~~ 123 (136)
T 2jab_A 86 LAAFIGHLEIAEVL-------------------LKHGADVNAQDKFGKTAFDISIGN 123 (136)
T ss_dssp HHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHcCCHHHHHHH-------------------HHcCCCCcCcCCCCCCHHHHHHHC
Confidence 99999886544333 125778889999999999998753
No 59
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.83 E-value=1.2e-20 Score=159.86 Aligned_cols=156 Identities=15% Similarity=0.105 Sum_probs=116.8
Q ss_pred hHHHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcH----HHHHHHHHhCCcccccccccCC
Q 045240 4 SRNIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNF----RFLAELIGSYPDFVHELDENGR 75 (341)
Q Consensus 4 ~~~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~----~~v~~Ll~~~~~~~~~~d~~G~ 75 (341)
+.+.+.+|.++.+ .++.+++.+ .+..+ +..|+||||+|+.+|+. ++++.|++++++ ++.+|..|+
T Consensus 4 ~~~~~~l~~Aa~~g~~~~~~~l~~~~--~~~~~----~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~ 76 (186)
T 3t8k_A 4 MSEYRTVSAAAMLGTYEDFLELFEKG--YEDKE----SVLKSNILYDVLRNNNDEARYKISMFLINKGAD-IKSRTKEGT 76 (186)
T ss_dssp HHHCSSHHHHHHHSCHHHHHHHHHHS--SSCHH----HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SSCCCTTCC
T ss_pred cccccHHHHHHHcCCHHHHHHHHhcC--ccccc----ccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-CCCCCCCCC
Confidence 4556778888865 555555543 22211 25699999999999975 599999999999 699999999
Q ss_pred cHHHHHHHcCC------hhHHHHHHhcCCcccchhhcccCCCC-cHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHH
Q 045240 76 SIFHIAILNRH------MNVFNLIYEQGFNKQLLATYLDSCGN-NILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVE 148 (341)
Q Consensus 76 t~LH~Aa~~g~------~~iv~~Ll~~~~~~~~l~n~~d~~G~-TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~ 148 (341)
||||+|+..++ .+++++|++.|++. |.+|.+|+ ||||+|+..+..+ ....+.++
T Consensus 77 TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi----n~~d~~g~ttpLh~A~~~~~~~---------------~~~~~iv~ 137 (186)
T 3t8k_A 77 TLFFPLFQGGGNDITGTTELCKIFLEKGADI----TALYKPYKIVVFKNIFNYFVDE---------------NEMIPLYK 137 (186)
T ss_dssp CTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS----SSCBGGGTBCTTGGGGGCCSCH---------------HHHHHHHH
T ss_pred cHHHHHHHcCCcchhhHHHHHHHHHHCCCCC----CccCCCcCchHHHHHHHcCCCh---------------hhHHHHHH
Confidence 99999999997 47899999999974 55999999 9999999855432 11122344
Q ss_pred Hhh--CCcchhcccCCCCChhHHHHHH-HHHHHHhhHHHH
Q 045240 149 MIV--QPSYREMKNYDGKTPRELFTVE-HLELLRRDEQWM 185 (341)
Q Consensus 149 ~l~--~~~~~~~~n~~G~Tpl~la~~~-~~~l~~~~~~~~ 185 (341)
.++ +|++++.+|++|+||+|+|.+. +.+..+..+++.
T Consensus 138 ~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 138 LIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp HHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 444 5899999999999999999764 334444333333
No 60
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.83 E-value=2.1e-21 Score=173.77 Aligned_cols=148 Identities=20% Similarity=0.151 Sum_probs=116.8
Q ss_pred chHHHhhhhHHHHH----HHHHHHHHHhcCChhh---HHHHhcCCChHHHHHHHc---CcHHHHHHHHHhCCcc------
Q 045240 3 CSRNIELMNNQALE----LVKCLWKEINRQQDVD---VAEVIRKPTNLLLDAAEV---GNFRFLAELIGSYPDF------ 66 (341)
Q Consensus 3 ~~~~~~~lh~aa~~----~v~~Ll~~~~~~~~~~---~~~~~~~g~tpLh~Aa~~---G~~~~v~~Ll~~~~~~------ 66 (341)
+.++++++|+|+.. +++.|++.+.+..... ....|.+|+||||+|+.. |+.++++.|++.+++.
T Consensus 10 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~ 89 (273)
T 2pnn_A 10 RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQF 89 (273)
T ss_dssp -CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHH
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHH
Confidence 45678999999966 7777887665432111 113467899999999987 9999999999987542
Q ss_pred c----ccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccC--------------CCCcHHHHHHHhCCCCCcc
Q 045240 67 V----HELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDS--------------CGNNILHLAAKYRSPSPYR 128 (341)
Q Consensus 67 ~----~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~--------------~G~TpLH~Aa~~~~~~~v~ 128 (341)
+ ...|..|+||||+|+.+|+.+++++|++.|++.+ .+|. +|+||||+|+..|+.++++
T Consensus 90 i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~----~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 165 (273)
T 2pnn_A 90 VNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ----AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVK 165 (273)
T ss_dssp HTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHH
T ss_pred hhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC----ccccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 1 2256799999999999999999999999998754 4665 7999999999999976554
Q ss_pred cccccHHhhHHHhhhHHHHHHhh---CCcchhcccCCCCChhHHHHHH
Q 045240 129 TVSGAALEMQRELLIYKEVEMIV---QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 129 ~L~~~~l~~~~~l~~~~~v~~l~---~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
.| +. .+++++.+|.+|+||+++|.+.
T Consensus 166 ~L-------------------l~~~~~gad~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 166 FL-------------------LQNSWQPADISARDSVGNTVLHALVEV 194 (273)
T ss_dssp HH-------------------HHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred HH-------------------HhcccCCCCceeeCCCCCcHHHHHHHc
Confidence 44 23 4788999999999999999863
No 61
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.83 E-value=8.2e-21 Score=152.11 Aligned_cols=117 Identities=15% Similarity=0.155 Sum_probs=103.3
Q ss_pred hHHHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHH
Q 045240 4 SRNIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFH 79 (341)
Q Consensus 4 ~~~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH 79 (341)
-.+.+++|+|+.. +++.|++++.+.+. .|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~ 85 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNA-----KDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLH 85 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCC-----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHH
Confidence 3578999999954 99999998877654 456899999999999999999999999998 6889999999999
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
+|+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..++.++++.|
T Consensus 86 ~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 86 LAAFIGHLEIAEVLLKHGADV----NAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCC----cCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 999999999999999999874 55899999999999999997765543
No 62
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.83 E-value=5.8e-21 Score=179.08 Aligned_cols=165 Identities=19% Similarity=0.176 Sum_probs=132.4
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhC---CcccccccccCC
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSY---PDFVHELDENGR 75 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~---~~~~~~~d~~G~ 75 (341)
+..+.|++|+|+. +++++|++++.+++. .|.+|.||||+|+..|+.++++.|++.+ .+ ++..|..|+
T Consensus 163 d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~-----~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~d~~g~ 236 (373)
T 2fo1_E 163 DCDENTPLMLAVLARRRRLVAYLMKAGADPTI-----YNKSERSALHQAAANRDFGMMVYMLNSTKLKGD-IEELDRNGM 236 (373)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-----CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT-TSCCCTTSC
T ss_pred CCCCCCHHHHHHHcChHHHHHHHHHCCCCCcc-----cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC-hhhcCCCCC
Confidence 4567899999985 499999998887664 3467899999999999999999999876 34 577889999
Q ss_pred cHHHHHHHcC---ChhHHHHHHhcCCcccc----hhhcccCCCCcHHHHHHHhCCCCCccccc--------------ccH
Q 045240 76 SIFHIAILNR---HMNVFNLIYEQGFNKQL----LATYLDSCGNNILHLAAKYRSPSPYRTVS--------------GAA 134 (341)
Q Consensus 76 t~LH~Aa~~g---~~~iv~~Ll~~~~~~~~----l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~--------------~~~ 134 (341)
||||+|+.++ +.+++++|++.|.+.+. ..+.+|.+|+||||+|+..|+.++++.|. .++
T Consensus 237 t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~Tp 316 (373)
T 2fo1_E 237 TALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTP 316 (373)
T ss_dssp CHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCH
T ss_pred CHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCH
Confidence 9999999988 78899999998876543 11336778999999999998887776651 257
Q ss_pred HhhHHHhhhHHHHHHhh-CCcchhcccCCCCChhHHHHHH
Q 045240 135 LEMQRELLIYKEVEMIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 135 l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
++.+...+..+.++.++ .|++++.+|.+|+||+++|.+.
T Consensus 317 L~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~ 356 (373)
T 2fo1_E 317 IMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQAN 356 (373)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHc
Confidence 78888888888888777 6888899999999999998653
No 63
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.82 E-value=6.4e-21 Score=160.69 Aligned_cols=114 Identities=25% Similarity=0.258 Sum_probs=95.5
Q ss_pred HHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhccc-CCCCc
Q 045240 35 EVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLD-SCGNN 113 (341)
Q Consensus 35 ~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d-~~G~T 113 (341)
..+.+|.||||.|++.|+.++++.|++ +.+ ++.+|.+|+||||+|+.+|+.+++++|++.|++. |.+| .+|+|
T Consensus 39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~----~~~~~~~g~t 112 (183)
T 3deo_A 39 DVVSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL----DHRDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCSSSSCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CcCCCCCCCC
Confidence 345678999999999999999999999 666 6889999999999999999999999999998874 4477 88999
Q ss_pred HHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHHH
Q 045240 114 ILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 114 pLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
|||+|+..|+.++++.| +..+++++.+|.+|+||+++|.+.
T Consensus 113 pL~~A~~~~~~~~v~~L-------------------l~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEAL-------------------VELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHHHTTCHHHHHHH-------------------HHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHH-------------------HHcCCCCcCCCCCCCCHHHHHHHh
Confidence 99999999986654433 125788899999999999999764
No 64
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.82 E-value=3.6e-20 Score=165.46 Aligned_cols=165 Identities=19% Similarity=0.155 Sum_probs=120.4
Q ss_pred chHHHhhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+..+.|++|+|+ .+++++|++++.+.+. .|.+|.||||+|+..|+.++++.|++++++ ++.+|..|+|||
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 109 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVL-----RKKNGATPFLLAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAF 109 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTCCBHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc-----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCcccCCHH
Confidence 344678899988 4588888888777554 345788999999999999999999988888 578888899999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccch------hhcccCCCCcHHHHHHHhCCCCCccccc--------------ccHHhhH
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLL------ATYLDSCGNNILHLAAKYRSPSPYRTVS--------------GAALEMQ 138 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l------~n~~d~~G~TpLH~Aa~~~~~~~v~~L~--------------~~~l~~~ 138 (341)
|+|+.+|+.+++++|++.|.+.+.. .+..|..|.||||+|+..|+.++++.|. .++++.+
T Consensus 110 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a 189 (285)
T 1wdy_A 110 MEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHA 189 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 9999999999999998888764431 0112778888888888888877665541 1344444
Q ss_pred HHhhh----HHHHHHhh-CCcchhcccCCCCChhHHHHHH
Q 045240 139 RELLI----YKEVEMIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 139 ~~l~~----~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
...+. .+.++.++ .+.+++.+|.+|+||+++|.+.
T Consensus 190 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 229 (285)
T 1wdy_A 190 LLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEK 229 (285)
T ss_dssp HHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHT
T ss_pred HHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 44333 34455554 5777888888888888887653
No 65
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.82 E-value=2.9e-20 Score=145.80 Aligned_cols=110 Identities=28% Similarity=0.364 Sum_probs=88.0
Q ss_pred CCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHH
Q 045240 39 KPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLA 118 (341)
Q Consensus 39 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~A 118 (341)
+|+||||.|++.|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.|.+. +.+|.+|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV----NAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC----cccCCCCCcHHHHH
Confidence 478888888888888888888888887 5778888888888888888888888888888764 44788888888888
Q ss_pred HHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHH
Q 045240 119 AKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 119 a~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 172 (341)
+..++.++++.| +..+.+++.+|.+|+||+++|.+
T Consensus 76 ~~~~~~~~~~~L-------------------l~~g~~~~~~~~~g~t~l~~A~~ 110 (126)
T 1n0r_A 76 ARNGHLEVVKLL-------------------LEAGADVNAKDKNGRTPLHLAAR 110 (126)
T ss_dssp HHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHcChHHHHHHH-------------------HHcCCCCcccCCCCCCHHHHHHH
Confidence 888875544332 12567788888888888888865
No 66
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.81 E-value=4.8e-21 Score=153.47 Aligned_cols=118 Identities=14% Similarity=0.022 Sum_probs=103.4
Q ss_pred cchHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCccccccccc-CCc
Q 045240 2 KCSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDEN-GRS 76 (341)
Q Consensus 2 k~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~-G~t 76 (341)
++-.+.+++|+|+. +++++|++++.+++. +|.+|+||||+|+. |+.++++.|++.+++ ++.+|.. |+|
T Consensus 8 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g~t 80 (136)
T 1d9s_A 8 LGGSSDAGLATAAARGQVETVRQLLEAGADPNA-----LNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATLTR 80 (136)
T ss_dssp CCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTC-----CCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTTBC
T ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCC-----cCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCCCC
Confidence 34567899999984 599999999877654 34689999999999 999999999999999 6899999 999
Q ss_pred HHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 77 IFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 77 ~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
|||+|+.+|+.+++++|++.|++. +.+|.+|+||||+|+..++.++++.|
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~----~~~d~~g~tpl~~A~~~~~~~~~~~L 130 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARL----DVCDAWGRLPVDLAEEQGHRDIARYL 130 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCC----CCCSSSSSCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC----CccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999874 55899999999999999997765544
No 67
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.81 E-value=1.5e-20 Score=164.56 Aligned_cols=127 Identities=21% Similarity=0.265 Sum_probs=99.7
Q ss_pred HHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcC
Q 045240 18 VKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQG 97 (341)
Q Consensus 18 v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~ 97 (341)
++.|++++.+.+..+ +.+.+|.||||.|++.|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.|
T Consensus 1 v~~ll~~~~~~~~~~--~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 77 (229)
T 2vge_A 1 MRSVLRKAGSPRKAR--RARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAG 77 (229)
T ss_dssp ---------CCCCCC--CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CeehhccCCCCcccc--ccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 456777877766444 3456788999999999999999999999988 6889999999999999999999999999998
Q ss_pred CcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhccc-CCCCChhHHH
Q 045240 98 FNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKN-YDGKTPRELF 170 (341)
Q Consensus 98 ~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n-~~G~Tpl~la 170 (341)
++. |.+|.+|+||||+|+..|+.++++.| +..+++++.++ .+|+||+++|
T Consensus 78 a~~----n~~d~~g~tpLh~A~~~g~~~~v~~L-------------------l~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 78 ANV----NSPDSHGWTPLHCAASCNDTVICMAL-------------------VQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp CCT----TCCCTTCCCHHHHHHHTTCHHHHHHH-------------------HTTTCCTTCCCSSTTCCTGGGC
T ss_pred CCC----CCCCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCcccccCCCCCCHHHHH
Confidence 864 55899999999999999986654433 22578888886 6999999998
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.81 E-value=1.8e-20 Score=152.97 Aligned_cols=117 Identities=14% Similarity=0.073 Sum_probs=102.8
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+..+.|++|+|+. +++++|++.+.+.+. +|.+|.||||.|+..|+.++++.|++.+++ ++.+|..|+|||
T Consensus 31 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 104 (153)
T 1awc_B 31 DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA-----RTKVDRTPLHMAASEGHANIVEVLLKHGAD-VNAKDMLKMTAL 104 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC-----CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-----CCCCCCCHHHHHHHcChHHHHHHHHHcCCC-CCCCCCCCCCHH
Confidence 3456799999985 599999998777654 446899999999999999999999999998 689999999999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCccc
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRT 129 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~ 129 (341)
|+|+.+|+.+++++|++.|++. +.+|.+|+||||+|+..|+.++++.
T Consensus 105 ~~A~~~~~~~~v~~Ll~~ga~~----~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 105 HWATEHNHQEVVELLIKYGADV----HTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCc----cccCCCCCCHHHHHHHcCCHHHHHH
Confidence 9999999999999999999874 5589999999999999999765543
No 69
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.80 E-value=2.8e-20 Score=157.62 Aligned_cols=115 Identities=15% Similarity=0.160 Sum_probs=101.4
Q ss_pred HHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcH
Q 045240 35 EVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNI 114 (341)
Q Consensus 35 ~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~Tp 114 (341)
.+|.+|+||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.|.+. +.+|.+|+||
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~ 104 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV----NTKDFSGKTP 104 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT----TCCCTTSCCH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhccc-cccccccCccHHHHHHHcCCHHHHHHHHHCCCCC----CCCCCCCCcH
Confidence 4577899999999999999999999999988 6889999999999999999999999999999864 5589999999
Q ss_pred HHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHHH
Q 045240 115 LHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 115 LH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
||+|+..++.++++.| +..+.+++.+|.+|.||+++|...
T Consensus 105 L~~A~~~~~~~~v~~L-------------------l~~g~~~~~~~~~g~t~L~~A~~~ 144 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFL-------------------LEHGANVNDRNLEGETPLIVASKY 144 (192)
T ss_dssp HHHHHHHTCHHHHHHH-------------------HHTTCCSSCCCTTCCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHH-------------------HHCCCCCCCCCCCCCCHHHHHHHc
Confidence 9999999986654333 226788999999999999999764
No 70
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.80 E-value=1.7e-19 Score=155.93 Aligned_cols=149 Identities=17% Similarity=0.150 Sum_probs=123.7
Q ss_pred HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhc
Q 045240 17 LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQ 96 (341)
Q Consensus 17 ~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~ 96 (341)
++++|++++.+.+.. .|.+|.||||+|++.|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.
T Consensus 6 ~i~~Ll~~g~~~~~~----~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 6 VISDFIYQGASLHNQ----TDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp CEETTEETTCCTTCC----CTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred HHHHHHHcCCCcccc----cCCCCCchHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 445556665554432 256899999999999999999999999988 688999999999999999999999999998
Q ss_pred CCcccchhhcccCCCCcHHHHHHHhCCCCCcccc-------------cccHHhhHHHhhhHHHHHHhh-CCcchhcccCC
Q 045240 97 GFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV-------------SGAALEMQRELLIYKEVEMIV-QPSYREMKNYD 162 (341)
Q Consensus 97 ~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~ 162 (341)
+... ++.+|.+|+||||+|+..++.++++.| ..++++.+...+..+.++.++ .+.+++.+|.+
T Consensus 81 ~~~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 157 (223)
T 2f8y_A 81 RATD---LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR 157 (223)
T ss_dssp TTSC---TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCC---cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 8631 356899999999999999998877665 225777887778888888877 68889999999
Q ss_pred CCChhHHHHHH
Q 045240 163 GKTPRELFTVE 173 (341)
Q Consensus 163 G~Tpl~la~~~ 173 (341)
|.||+++|.+.
T Consensus 158 g~t~L~~A~~~ 168 (223)
T 2f8y_A 158 EETPLFLAARE 168 (223)
T ss_dssp CCCHHHHHHHH
T ss_pred CcCHHHHHHHc
Confidence 99999999753
No 71
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=2.8e-20 Score=161.43 Aligned_cols=116 Identities=22% Similarity=0.308 Sum_probs=101.8
Q ss_pred HHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhc-CCcccchhhcccCCC
Q 045240 33 VAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQ-GFNKQLLATYLDSCG 111 (341)
Q Consensus 33 ~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~-~~~~~~l~n~~d~~G 111 (341)
....+.+|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++. |.+. |.+|.+|
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~----~~~d~~g 140 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL----NQQNKLG 140 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC----CCCCTTS
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc----cccCCCC
Confidence 445678899999999999999999999999988 688999999999999999999999999998 7764 5599999
Q ss_pred CcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHH
Q 045240 112 NNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 112 ~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 172 (341)
+||||+|+..|+.++++.| +..+++++.+|.+|+||+++|..
T Consensus 141 ~tpL~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~t~l~~A~~ 182 (222)
T 3ehr_A 141 DTALHAAAWKGYADIVQLL-------------------LAKGARTDLRNIEKKLAFDMATN 182 (222)
T ss_dssp CCHHHHHHHHTCHHHHHHH-------------------HHHTCCSCCCCTTSCCHHHHCCS
T ss_pred CCHHHHHHHcCCHHHHHHH-------------------HHcCCCCccccCCCCCHHHHhcc
Confidence 9999999999996654443 12588899999999999999964
No 72
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.80 E-value=1.6e-20 Score=164.33 Aligned_cols=161 Identities=12% Similarity=0.107 Sum_probs=127.4
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCc-----cccccccc
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPD-----FVHELDEN 73 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~-----~~~~~d~~ 73 (341)
+..++|++|+|+. +++++|++++.+++. +|.+|.||||+|+..|+.++++.|++.+++ ..+..|..
T Consensus 42 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (236)
T 1ikn_D 42 NNLQQTPLHLAVITNQPEIAEALLGAGCDPEL-----RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN 116 (236)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC-----CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-----cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCC
Confidence 4567799999984 588888888777665 346899999999999999999999998753 24677888
Q ss_pred CCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccC-CCCcHHHHHHHhCCCCCccccc-------------ccHHhhHH
Q 045240 74 GRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDS-CGNNILHLAAKYRSPSPYRTVS-------------GAALEMQR 139 (341)
Q Consensus 74 G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~-~G~TpLH~Aa~~~~~~~v~~L~-------------~~~l~~~~ 139 (341)
|+||||+|+.+|+.+++++|++.|.+. +.+|. +|+||||+|+..|+.++++.|. .++++.+.
T Consensus 117 g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~ 192 (236)
T 1ikn_D 117 GHTCLHLASIHGYLGIVELLVSLGADV----NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTW 192 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHTCCT----TCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHH
Confidence 999999999999999999999998864 44776 8999999999999888776651 24666666
Q ss_pred HhhhHHHHHHhh-CCcchh--cccCCCCChhHHHHH
Q 045240 140 ELLIYKEVEMIV-QPSYRE--MKNYDGKTPRELFTV 172 (341)
Q Consensus 140 ~l~~~~~v~~l~-~~~~~~--~~n~~G~Tpl~la~~ 172 (341)
..+..+.++.++ .|++.. .+|.+|+||.+...+
T Consensus 193 ~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 193 GRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp TSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred ccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 666777777777 566554 889999999987654
No 73
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.80 E-value=1.3e-20 Score=150.90 Aligned_cols=119 Identities=15% Similarity=0.126 Sum_probs=104.1
Q ss_pred cchHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcH
Q 045240 2 KCSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSI 77 (341)
Q Consensus 2 k~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~ 77 (341)
++..+.|++|+++. +++++|++.+.+++. +|.+|.||||+|+..|+.++++.|++.+.+ ++.+|..|+||
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~ 79 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV-----KDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSP 79 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-----CCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCH
Confidence 45678899999995 499999998877664 446899999999999999999999999988 68999999999
Q ss_pred HHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 78 FHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 78 LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
||+|+.+|+.+++++|++.|++. +.+|.+|+||||+|+..+..+++.++
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~----~~~~~~g~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASR----NAVNIFGLRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC----CCCCCCCCCHHHHHhhccHHHHHhhc
Confidence 99999999999999999999874 55899999999999988776655544
No 74
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.80 E-value=2.4e-20 Score=152.96 Aligned_cols=113 Identities=15% Similarity=0.145 Sum_probs=98.1
Q ss_pred HhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCc-H
Q 045240 36 VIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNN-I 114 (341)
Q Consensus 36 ~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~T-p 114 (341)
.+..|.||||.|++.|+.++++.|++++++ ++.+|..|+||||+|+ +|+.+++++|++.|.+. |.+|.+|+| |
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~----~~~d~~g~ttp 81 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP----NCADPATLTRP 81 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC----CCCCTTTCCCH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC----CCcCCCCCcHH
Confidence 457899999999999999999999999988 6889999999999985 99999999999999874 558999999 9
Q ss_pred HHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHHH
Q 045240 115 LHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 115 LH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
||+|+..|+.++++.| +..+++++.+|.+|+||+++|...
T Consensus 82 L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~d~~g~tpl~~A~~~ 121 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVL-------------------HRAGARLDVRDAWGRLPVDLAEEL 121 (156)
T ss_dssp HHHHHHHTCHHHHHHH-------------------HHHTCCSSCCCTTCCCHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHH-------------------HHcCCCCcccCCCCCCHHHHHHHh
Confidence 9999999996654433 125788999999999999999764
No 75
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.80 E-value=3.2e-20 Score=163.83 Aligned_cols=112 Identities=25% Similarity=0.262 Sum_probs=80.8
Q ss_pred HhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhccc-CCCCcH
Q 045240 36 VIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLD-SCGNNI 114 (341)
Q Consensus 36 ~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d-~~G~Tp 114 (341)
.+.+|.||||.|++.|+.++++.|++ +.+ ++.+|..|+||||+|+.+|+.+++++|++.|++. |.+| .+|+||
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~----~~~~~~~g~t~ 114 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL----DHRDMRGGLTA 114 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT----TCCCSSSCCCH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC----CcCCCCCCCCH
Confidence 34567788888888888888888887 655 5777778888888888888888888888877764 3356 678888
Q ss_pred HHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHH
Q 045240 115 LHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 115 LH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 172 (341)
||+|+..|+.++++.| +..+++++.+|.+|+||+++|.+
T Consensus 115 L~~A~~~g~~~~v~~L-------------------l~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 115 LHMAAGYVRPEVVEAL-------------------VELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHH-------------------HHCCCCCCCCCCCCCcHHHHHHH
Confidence 8888887775543332 12567777778888888887764
No 76
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.80 E-value=9.3e-21 Score=165.84 Aligned_cols=159 Identities=14% Similarity=0.073 Sum_probs=122.1
Q ss_pred hHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHH
Q 045240 4 SRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFH 79 (341)
Q Consensus 4 ~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH 79 (341)
....+++|+|+. ++++.|++.+.+++. +|.+|+||||+|+..|+.++++.|++.+++ ++.+|..|+||||
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~tpLh 92 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVKEMNDPSQ-----PNEEGITALHNAICGANYSIVDFLITAGAN-VNSPDSHGWTPLH 92 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHHSSCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHH
T ss_pred cchhHHHHHHHHcCCHHHHHHHHhcCCCCCC-----CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHH
Confidence 356789999995 499999999877654 456899999999999999999999999998 6899999999999
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhccc-CCCCcHHHHH--HHhCCCCCccccccc--HHhhHHHhhh--------HHH
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLD-SCGNNILHLA--AKYRSPSPYRTVSGA--ALEMQRELLI--------YKE 146 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d-~~G~TpLH~A--a~~~~~~~v~~L~~~--~l~~~~~l~~--------~~~ 146 (341)
+|+.+|+.+++++|++.|++. +.+| .+|+||||+| +..|+.++++.|... .......-+. ...
T Consensus 93 ~A~~~g~~~~v~~Ll~~ga~~----~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~ 168 (229)
T 2vge_A 93 CAASCNDTVICMALVQHGAAI----FATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG 168 (229)
T ss_dssp HHHHTTCHHHHHHHHTTTCCT----TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST
T ss_pred HHHHcCCHHHHHHHHHcCCCc----ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc
Confidence 999999999999999999875 4465 6999999999 888988887776221 1111000000 000
Q ss_pred HHHhh-CCcc--hhcccCCCCChhHHHHH
Q 045240 147 VEMIV-QPSY--REMKNYDGKTPRELFTV 172 (341)
Q Consensus 147 v~~l~-~~~~--~~~~n~~G~Tpl~la~~ 172 (341)
.+.++ .+++ ++.+|.+|+||+++|..
T Consensus 169 ~~~ll~~ga~~~~~~~d~~G~TpL~~A~~ 197 (229)
T 2vge_A 169 DELSFREGESVTVLRRDGPEETDWWWAAL 197 (229)
T ss_dssp TBCCBCTTCEEEEEESSCTTCSSEEEEEE
T ss_pred cccCccccccccccccCCCcccHHHHHHH
Confidence 11122 3444 67788999999999854
No 77
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=5.8e-20 Score=137.22 Aligned_cols=87 Identities=30% Similarity=0.387 Sum_probs=78.4
Q ss_pred CCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHH
Q 045240 39 KPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLA 118 (341)
Q Consensus 39 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~A 118 (341)
+|+||||+|++.|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.|++. +.+|.+|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~----~~~d~~g~t~l~~A 75 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV----NAKDKNGRTPLHLA 75 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CccCCCCCCHHHHH
Confidence 489999999999999999999999998 6899999999999999999999999999999874 55899999999999
Q ss_pred HHhCCCCCcccc
Q 045240 119 AKYRSPSPYRTV 130 (341)
Q Consensus 119 a~~~~~~~v~~L 130 (341)
+..|+.++++.|
T Consensus 76 ~~~~~~~~~~~L 87 (93)
T 1n0q_A 76 ARNGHLEVVKLL 87 (93)
T ss_dssp HHTTCHHHHHHH
T ss_pred HHcCCHHHHHHH
Confidence 999997765544
No 78
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.80 E-value=2.7e-19 Score=150.66 Aligned_cols=111 Identities=20% Similarity=0.131 Sum_probs=96.3
Q ss_pred hHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCccccccc-ccCCcHH
Q 045240 4 SRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELD-ENGRSIF 78 (341)
Q Consensus 4 ~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d-~~G~t~L 78 (341)
-.+.|++|+++. ++++.|++ +.+++. +|.+|+||||+|+..|+.++++.|++++++ ++.+| ..|+|||
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~-----~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tpL 114 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDA-----VDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTC-----CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCC-----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCHH
Confidence 367899999995 48888887 555443 457899999999999999999999999999 57777 8999999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCC
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPS 125 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~ 125 (341)
|+|+.+|+.+++++|++.|++. +.+|.+|+||||+|++.++.+
T Consensus 115 ~~A~~~~~~~~v~~Ll~~ga~~----~~~d~~g~tpl~~A~~~~~~~ 157 (183)
T 3deo_A 115 HMAAGYVRPEVVEALVELGADI----EVEDERGLTALELAREILKTT 157 (183)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCT----TCCCTTSCCHHHHHHHHHHTC
T ss_pred HHHHhcCcHHHHHHHHHcCCCC----cCCCCCCCCHHHHHHHhccCc
Confidence 9999999999999999999875 459999999999999877643
No 79
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.80 E-value=1.8e-19 Score=167.89 Aligned_cols=135 Identities=13% Similarity=0.021 Sum_probs=108.5
Q ss_pred HhcCCChHHHHHHHcC--cHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcc-cchhhcccCCCC
Q 045240 36 VIRKPTNLLLDAAEVG--NFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNK-QLLATYLDSCGN 112 (341)
Q Consensus 36 ~~~~g~tpLh~Aa~~G--~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~-~~l~n~~d~~G~ 112 (341)
.|.+|.||||+|+..| +.++++.|++.+.+ ++.+|..|+||||+|+.+|+.+++++|++.|++. ...+|.+|.+|+
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~ 212 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN 212 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCC
Confidence 6678999999999999 99999999999988 6889999999999999999999999999988761 222466899999
Q ss_pred cHHHHHHHhCCCCCccccc-------------ccHHhhHHHhhhHHHHHHhh-CCcchhc------------ccCCCCCh
Q 045240 113 NILHLAAKYRSPSPYRTVS-------------GAALEMQRELLIYKEVEMIV-QPSYREM------------KNYDGKTP 166 (341)
Q Consensus 113 TpLH~Aa~~~~~~~v~~L~-------------~~~l~~~~~l~~~~~v~~l~-~~~~~~~------------~n~~G~Tp 166 (341)
||||+|+..|+.++++.|. .++++.+...+..+.++.++ .+++.+. .+..|.||
T Consensus 213 t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (364)
T 3ljn_A 213 SHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLD 292 (364)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCT
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCccccccccccccc
Confidence 9999999999988877661 24778888878888888776 3444322 45667788
Q ss_pred hHHHH
Q 045240 167 RELFT 171 (341)
Q Consensus 167 l~la~ 171 (341)
+..+.
T Consensus 293 l~~aa 297 (364)
T 3ljn_A 293 FVPAA 297 (364)
T ss_dssp TSCSS
T ss_pred chhhh
Confidence 76653
No 80
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=3.1e-20 Score=144.17 Aligned_cols=109 Identities=18% Similarity=0.233 Sum_probs=93.6
Q ss_pred HhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHH
Q 045240 36 VIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNIL 115 (341)
Q Consensus 36 ~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpL 115 (341)
+|++|+||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.|.+. +.+|.+|+|||
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~d~~g~tpl 79 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV----NARSKDGNTPE 79 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT----TCCCTTCCCTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC----cccCCCCCCHH
Confidence 578999999999999999999999999998 6889999999999999999999999999999874 55899999999
Q ss_pred HHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhH
Q 045240 116 HLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRE 168 (341)
Q Consensus 116 H~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~ 168 (341)
|+|+..++.++++.| +..|++++.++.+|.||..
T Consensus 80 ~~A~~~~~~~~~~~L-------------------l~~ga~~n~~~~~~~~~~~ 113 (115)
T 2l6b_A 80 HLAKKNGHHEIVKLL-------------------DAKGADVNARSWGSSHHHH 113 (115)
T ss_dssp HHHHTTTCHHHHHHH-------------------HTTSSSHHHHSCCCC----
T ss_pred HHHHHCCCHHHHHHH-------------------HHcCCCCCcCCcccccccc
Confidence 999999986544333 2268899999999999853
No 81
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.79 E-value=1.3e-19 Score=149.89 Aligned_cols=111 Identities=16% Similarity=0.163 Sum_probs=98.2
Q ss_pred CCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHH
Q 045240 39 KPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLA 118 (341)
Q Consensus 39 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~A 118 (341)
+|.||||.|++.|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.|.+. +.+|..|+||||+|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A 76 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP----QLLGKGRESALSLA 76 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTCCCHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC----CCcCCCCCcHHHHH
Confidence 689999999999999999999999988 6899999999999999999999999999998874 45899999999999
Q ss_pred HHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHHH
Q 045240 119 AKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 119 a~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
+..++.++++.| +..+.+++.+|.+|.||+++|...
T Consensus 77 ~~~~~~~~v~~L-------------------l~~g~~~~~~~~~g~t~L~~A~~~ 112 (167)
T 3v31_A 77 CSKGYTDIVKML-------------------LDCGVDVNEYDWNGGTPLLYAVHG 112 (167)
T ss_dssp HHHTCHHHHHHH-------------------HHHTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHcCCHHHHHHH-------------------HHCCCCCCcCCCCCCCHHHHHHHc
Confidence 999986654433 125778899999999999999753
No 82
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.79 E-value=3.9e-20 Score=145.45 Aligned_cols=107 Identities=16% Similarity=0.114 Sum_probs=94.2
Q ss_pred HHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHH
Q 045240 5 RNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHI 80 (341)
Q Consensus 5 ~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~ 80 (341)
.+.+++|+++. ++++.|++.+.+++. .|.+|+||||+|+..|+.++++.|++.+++ ++.+|..|+||||+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNR-----TLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLS 79 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTS-----CCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCc-----cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHH
Confidence 46789999984 599999998776554 456899999999999999999999999998 68999999999999
Q ss_pred HHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHh
Q 045240 81 AILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKY 121 (341)
Q Consensus 81 Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~ 121 (341)
|+.+|+.+++++|++.|++. +.+|.+|+||||+|...
T Consensus 80 A~~~~~~~~v~~Ll~~ga~~----~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 80 AVYEGHVSCVKLLLSKGADK----TVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHHHTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHCCCH
T ss_pred HHHcCCHHHHHHHHHcCCCC----CCcCCCCCCHHHHhCCH
Confidence 99999999999999999874 45899999999999543
No 83
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.79 E-value=2.3e-19 Score=156.27 Aligned_cols=141 Identities=16% Similarity=0.104 Sum_probs=114.0
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+-++.+++|+|+. ++++.|++.+.+.+. .|.+|.||||.|++.|+.++++.|++.+++.....+..|+|||
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDVRQ-----PDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPL 80 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCcCC-----CCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChh
Confidence 3467789999984 599999998877554 3468999999999999999999999999986556667799999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhc
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREM 158 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~ 158 (341)
|+|+.+|+.+++++|++.|.+. +.+|..|.||||+|+..|+.++++.| +..+.+++.
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~l~~A~~~~~~~~~~~L-------------------l~~~~~~~~ 137 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGADP----SLIDGEGCSCIHLAAQFGHTSIVAYL-------------------IAKGQDVDM 137 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC----cccCCCCCCHHHHHHHcCHHHHHHHH-------------------HhcCCCccc
Confidence 9999999999999999998874 44899999999999999987655444 113455566
Q ss_pred ccCCCCChhHHHH
Q 045240 159 KNYDGKTPRELFT 171 (341)
Q Consensus 159 ~n~~G~Tpl~la~ 171 (341)
+|.+|.||+++|.
T Consensus 138 ~~~~g~t~l~~a~ 150 (240)
T 3eu9_A 138 MDQNGMTPLMWAA 150 (240)
T ss_dssp CCTTSCCHHHHHH
T ss_pred cCCCCCcHHHHHH
Confidence 6666666666664
No 84
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.79 E-value=1.4e-19 Score=141.84 Aligned_cols=115 Identities=27% Similarity=0.301 Sum_probs=101.2
Q ss_pred HHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHH
Q 045240 6 NIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIA 81 (341)
Q Consensus 6 ~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~A 81 (341)
++|++|+|+. +++++|++++.+.+. .|.+|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-----~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNA-----KDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTC-----CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCC-----cCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHH
Confidence 4689999985 599999998777654 346899999999999999999999999988 688999999999999
Q ss_pred HHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 82 ILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 82 a~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
+..|+.+++++|++.|.+. +.+|.+|+||||+|+..++.++++.|
T Consensus 76 ~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~l~~A~~~~~~~~~~~L 120 (126)
T 1n0r_A 76 ARNGHLEVVKLLLEAGADV----NAKDKNGRTPLHLAARNGHLEVVKLL 120 (126)
T ss_dssp HHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcChHHHHHHHHHcCCCC----cccCCCCCCHHHHHHHcCcHHHHHHH
Confidence 9999999999999999874 45899999999999999987765544
No 85
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.79 E-value=7.3e-20 Score=149.58 Aligned_cols=116 Identities=19% Similarity=0.129 Sum_probs=101.3
Q ss_pred chHHHhhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+..+.|++|+ + .++++.|++++.+++. +|.+|.||||.|+..|+.++++.|++.+++ ++.+|..|+|||
T Consensus 33 ~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 105 (156)
T 1bd8_A 33 NRFGKTALQV-MMFGSTAIALELLKQGASPNV-----QDTSGTSPVHDAARTGFLDTLKVLVEHGAD-VNVPDGTGALPI 105 (156)
T ss_dssp CTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHH
T ss_pred CCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC-----cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHH
Confidence 4467889999 6 5699999999877654 446899999999999999999999999988 689999999999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
|+|+.+|+.+++++|++. .+. +.+|.+|+||||+|+..|+.++++.|
T Consensus 106 ~~A~~~~~~~~v~~Ll~~-~~~----~~~~~~g~t~l~~A~~~~~~~~v~~L 152 (156)
T 1bd8_A 106 HLAVQEGHTAVVSFLAAE-SDL----HRRDARGLTPLELALQRGAQDLVDIL 152 (156)
T ss_dssp HHHHHHTCHHHHHHHHTT-SCT----TCCCTTSCCHHHHHHHSCCHHHHHHH
T ss_pred HHHHHhChHHHHHHHHhc-cCC----CCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 999999999999999998 543 56899999999999999997765543
No 86
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.79 E-value=2.8e-20 Score=174.43 Aligned_cols=163 Identities=20% Similarity=0.154 Sum_probs=130.0
Q ss_pred hHHHhhhhHHHHH----HHHHH--------HHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCccccccc
Q 045240 4 SRNIELMNNQALE----LVKCL--------WKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELD 71 (341)
Q Consensus 4 ~~~~~~lh~aa~~----~v~~L--------l~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d 71 (341)
..++|++|+|+.. +++.| ++.+.+++. .|.+|.||||+|+..|+.++++.|++.+++ ++.+|
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~-----~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-~~~~~ 196 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNA-----MDCDENTPLMLAVLARRRRLVAYLMKAGAD-PTIYN 196 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTC-----CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCC
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcC-----CCCCCCCHHHHHHHcChHHHHHHHHHCCCC-CcccC
Confidence 4678999999843 44444 455555544 457899999999999999999999999998 68899
Q ss_pred ccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhC---CCCCcccc------------------
Q 045240 72 ENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYR---SPSPYRTV------------------ 130 (341)
Q Consensus 72 ~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~---~~~~v~~L------------------ 130 (341)
..|+||||+|+.+|+.+++++|++.+... ..++.+|.+|+||||+|+..+ +.++++.|
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~ 275 (373)
T 2fo1_E 197 KSERSALHQAAANRDFGMMVYMLNSTKLK-GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 275 (373)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHTTSHHHH-HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSS
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhcCccc-cChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcc
Confidence 99999999999999999999999987211 113668999999999999987 44444333
Q ss_pred ---cccHHhhHHHhhhHHHHHHhh-C-CcchhcccCCCCChhHHHHHH
Q 045240 131 ---SGAALEMQRELLIYKEVEMIV-Q-PSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 131 ---~~~~l~~~~~l~~~~~v~~l~-~-~~~~~~~n~~G~Tpl~la~~~ 173 (341)
..++++.+...+..+.++.++ . +.+++.+|.+|.||+++|.+.
T Consensus 276 d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 276 KYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 323 (373)
T ss_dssp SCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHH
T ss_pred cccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHc
Confidence 125678887778888888887 3 489999999999999999754
No 87
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.78 E-value=1.7e-19 Score=149.83 Aligned_cols=118 Identities=19% Similarity=0.241 Sum_probs=103.9
Q ss_pred chHHHhhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+..+.|++|+|+ .+++++|++++.+.+. .|.+|.||||.|+..|+.++++.|++.+++ ++.+|..|+|||
T Consensus 44 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L 117 (169)
T 2y1l_E 44 DASGWTPLHLAAFNGHLEIVEVLLKNGADVNA-----VDHAGMTPLRLAALFGHLEIVEVLLKNGAD-VNANDMEGHTPL 117 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHH
Confidence 456789999998 4599999998877654 346899999999999999999999999998 688999999999
Q ss_pred HHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 79 HIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 79 H~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
|+|+.+|+.+++++|++.|.+. +.+|.+|+||||+|+..|+.++++.|
T Consensus 118 ~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~l~~A~~~~~~~~~~~L 165 (169)
T 2y1l_E 118 HLAAMFGHLEIVEVLLKNGADV----NAQDKFGKTAFDISIDNGNEDLAEIL 165 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCC----CCcCCCCCCHHHHHHHhCCHHHHHHH
Confidence 9999999999999999999874 55899999999999999997765544
No 88
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.78 E-value=8.6e-20 Score=150.00 Aligned_cols=119 Identities=18% Similarity=0.157 Sum_probs=104.4
Q ss_pred chHHHhhhhHHH---HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHH
Q 045240 3 CSRNIELMNNQA---LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFH 79 (341)
Q Consensus 3 ~~~~~~~lh~aa---~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH 79 (341)
+..++|++|+++ .+++++|++++.+++. +|.+|.||||.|++.|+.++++.|++.+++ ++.+|..|+||||
T Consensus 35 ~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~ 108 (162)
T 1ihb_A 35 NGFGRTALQVMKLGNPEIARRLLLRGANPDL-----KDRTGFAVIHDAARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLH 108 (162)
T ss_dssp CTTSCCHHHHCCSSCHHHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred CccCccHHHHHHcCcHHHHHHHHHcCCCCCC-----CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHH
Confidence 456788999986 6799999999877654 346899999999999999999999999988 6899999999999
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
+|+.+|+.+++++|++.|.+. ++.+|.+|+||||+|+..|+.++++.|
T Consensus 109 ~A~~~~~~~~v~~Ll~~g~~~---~~~~~~~g~t~l~~A~~~~~~~~~~~L 156 (162)
T 1ihb_A 109 LAAKEGHLRVVEFLVKHTASN---VGHRNHKGDTACDLARLYGRNEVVSLM 156 (162)
T ss_dssp HHHHTTCHHHHHHHHHHSCCC---TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHccCCC---CCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 999999999999999999863 355899999999999999997765554
No 89
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.78 E-value=5.2e-19 Score=150.43 Aligned_cols=131 Identities=18% Similarity=0.163 Sum_probs=113.9
Q ss_pred cCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHH
Q 045240 38 RKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHL 117 (341)
Q Consensus 38 ~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~ 117 (341)
..+.||||.|+..|+.+.++.|++.++..++..|.+|+||||+|+.+|+.+++++|++.|.+. +.+|..|+||||+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~l~~ 78 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI----NLQNSISDSPYLY 78 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTSCCHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CCCCCCCCCHHHH
Confidence 568999999999999999999999988557899999999999999999999999999999874 5589999999999
Q ss_pred HHHhCCCCCccccc--------------ccHHhhHHHhhhHHHHHHhh-CC-cchhcccCCCCChhHHHHH
Q 045240 118 AAKYRSPSPYRTVS--------------GAALEMQRELLIYKEVEMIV-QP-SYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 118 Aa~~~~~~~v~~L~--------------~~~l~~~~~l~~~~~v~~l~-~~-~~~~~~n~~G~Tpl~la~~ 172 (341)
|+..|+.++++.|. .++++.+...+..+.++.++ .+ .+++.+|.+|.||+++|..
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 149 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVG 149 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHH
Confidence 99999988776552 24677777777788888877 45 7889999999999999874
No 90
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.78 E-value=4.1e-19 Score=160.52 Aligned_cols=89 Identities=19% Similarity=0.211 Sum_probs=81.5
Q ss_pred hcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHH
Q 045240 37 IRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILH 116 (341)
Q Consensus 37 ~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH 116 (341)
+.+|.||||.||..|+.++++.|++.+++ ++..|.+|+||||+|+.+|+.+++++|++.|++. |.+|.+|+||||
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~----~~~~~~g~tpL~ 111 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFLVENGANI----NQPDNEGWIPLH 111 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC----CCCCCCCCcHHH
Confidence 45678999999999999999999999998 6899999999999999999999999999999874 558999999999
Q ss_pred HHHHhCCCCCcccc
Q 045240 117 LAAKYRSPSPYRTV 130 (341)
Q Consensus 117 ~Aa~~~~~~~v~~L 130 (341)
+|+..|+.++++.|
T Consensus 112 ~A~~~g~~~~v~~L 125 (299)
T 1s70_B 112 AAASCGYLDIAEYL 125 (299)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHH
Confidence 99999998877655
No 91
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.78 E-value=1.6e-19 Score=149.12 Aligned_cols=115 Identities=16% Similarity=0.145 Sum_probs=99.3
Q ss_pred HhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHH
Q 045240 36 VIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNIL 115 (341)
Q Consensus 36 ~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpL 115 (341)
.|.+|.||||.|++.|+.++++.|++..+...+..|..|+||||+|+.+|+.+++++|++.|.+. +.+|.+|+|||
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L 79 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV----HAKDKGGLVPL 79 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC----CccCCCCCCHH
Confidence 45678999999999999999999999877667888999999999999999999999999999874 55899999999
Q ss_pred HHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHHH
Q 045240 116 HLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 116 H~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
|+|+..|+.++++.| +..+.+++.+|.+|.||+++|...
T Consensus 80 ~~A~~~~~~~~v~~L-------------------l~~g~~~~~~~~~g~t~L~~A~~~ 118 (165)
T 3twr_A 80 HNACSYGHYEVAELL-------------------VKHGAVVNVADLWKFTPLHEAAAK 118 (165)
T ss_dssp HHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHcCcHHHHHHH-------------------HhCCCCCCCcCCCCCCHHHHHHHc
Confidence 999999986654433 226788999999999999999753
No 92
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.78 E-value=1.5e-19 Score=158.81 Aligned_cols=115 Identities=16% Similarity=0.140 Sum_probs=101.0
Q ss_pred HHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHH
Q 045240 6 NIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIA 81 (341)
Q Consensus 6 ~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~A 81 (341)
..+++|.|+.. +++.|++.+.+++.. |.+|+||||+|+..|+.++++.|++++++ ++.+|..|+||||+|
T Consensus 37 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-----d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A 110 (239)
T 1ycs_B 37 PLALLLDSSLEGEFDLVQRIIYEVDDPSLP-----NDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCA 110 (239)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTSTTSSCCCC-----CTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHH
T ss_pred hhHHHHHHHHcCCHHHHHHHHHcCCCCCCc-----CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHH
Confidence 47899999854 899999888776654 46899999999999999999999999999 689999999999999
Q ss_pred HHcCChhHHHHHHhcCCcccchhhcccCCCC-cHHHHH--HHhCCCCCcccc
Q 045240 82 ILNRHMNVFNLIYEQGFNKQLLATYLDSCGN-NILHLA--AKYRSPSPYRTV 130 (341)
Q Consensus 82 a~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~-TpLH~A--a~~~~~~~v~~L 130 (341)
+.+|+.+++++|++.|++. +.+|.+|. ||||+| +..|+.++++.|
T Consensus 111 ~~~~~~~~v~~Ll~~ga~~----~~~~~~~~~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 111 ASCNNVQVCKFLVESGAAV----FAMTYSDMQTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp HHTTCHHHHHHHHHTTCCT----TCCCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCc----ceecCCCCcchHHHHHHhhhccHHHHHHH
Confidence 9999999999999999875 44787776 999999 778888887766
No 93
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.78 E-value=1.4e-19 Score=162.71 Aligned_cols=131 Identities=13% Similarity=0.102 Sum_probs=110.0
Q ss_pred CCChHHHHHHHcCcHHHHHHHHHhCCc-ccccccccCCcHHHHHHHcCChhHHHHHHhcCC-cccchhhcccCCCCcHHH
Q 045240 39 KPTNLLLDAAEVGNFRFLAELIGSYPD-FVHELDENGRSIFHIAILNRHMNVFNLIYEQGF-NKQLLATYLDSCGNNILH 116 (341)
Q Consensus 39 ~g~tpLh~Aa~~G~~~~v~~Ll~~~~~-~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~-~~~~l~n~~d~~G~TpLH 116 (341)
.+++++|.|+..|+.+.++.+++...+ .++.+|.+|+||||+|+.+|+.+++++|++.|. + ++.+|.+|+||||
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~----~~~~~~~g~tpL~ 150 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCK----VDKQNRAGYSPIM 150 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCC----TTCCCTTSCCHHH
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCc----CCCCCCCCCCHHH
Confidence 357899999999999999999887654 357889999999999999999999999999997 4 3568999999999
Q ss_pred HHHH-----hCCCCCcccc-------------cccHHhhHHHhhhHHHHHHhh-CCcchhcccCCCCChhHHHHHH
Q 045240 117 LAAK-----YRSPSPYRTV-------------SGAALEMQRELLIYKEVEMIV-QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 117 ~Aa~-----~~~~~~v~~L-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
+|+. .++.++++.+ ..++++.+...+..+.++.++ .|++++.+|.+|+||+++|...
T Consensus 151 ~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~ 226 (276)
T 4hbd_A 151 LTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEH 226 (276)
T ss_dssp HGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHC
Confidence 9993 3333333322 347889988888889999887 6899999999999999999764
No 94
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.77 E-value=1e-19 Score=167.64 Aligned_cols=118 Identities=11% Similarity=0.090 Sum_probs=85.8
Q ss_pred HHhhhhHHHHHHHHHHHHHHhcCChhhHHH---------HhcCC---ChHHHHHHHcCcHHHHHHHHHhCCccccc-ccc
Q 045240 6 NIELMNNQALELVKCLWKEINRQQDVDVAE---------VIRKP---TNLLLDAAEVGNFRFLAELIGSYPDFVHE-LDE 72 (341)
Q Consensus 6 ~~~~lh~aa~~~v~~Ll~~~~~~~~~~~~~---------~~~~g---~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~-~d~ 72 (341)
..+++| -..++++.|++++.+.+...... ....+ .+.+|.|+..+..++++.|++.+.+ ++. +|.
T Consensus 52 g~~~~~-g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~d-vn~~~d~ 129 (327)
T 1sw6_A 52 PVVNDN-EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLN-LNIPVDE 129 (327)
T ss_dssp CCCCCH-HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCC-SCSCCST
T ss_pred CCcccC-chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCC-cccccCC
Confidence 344555 56789999999998865422100 01112 2345899999999999999999888 577 899
Q ss_pred cCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCC---CCCccc
Q 045240 73 NGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRS---PSPYRT 129 (341)
Q Consensus 73 ~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~---~~~v~~ 129 (341)
+|+||||+|+.+|+.+++++|++.|++. |.+|.+|+||||+|+..|+ .+++..
T Consensus 130 ~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~----n~~d~~g~TpLh~A~~~g~~~~~~~~~~ 185 (327)
T 1sw6_A 130 HGNTPLHWLTSIANLELVKHLVKHGSNR----LYGDNMGESCLVKAVKSVNNYDSGTFEA 185 (327)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCT----TBCCTTCCCHHHHHHHSSHHHHTTCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC----CCcCCCCCCHHHHHHHhcccccHHHHHH
Confidence 9999999999999999999999999874 5599999999999999988 555443
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.77 E-value=9.8e-20 Score=165.90 Aligned_cols=136 Identities=11% Similarity=0.023 Sum_probs=104.9
Q ss_pred hhhhHHHH----HHHHHHHHHHhcCChhhH-HHHhcCCChHHHHHHHc---CcHHHHHHHHHhCCcccccccccCCcHHH
Q 045240 8 ELMNNQAL----ELVKCLWKEINRQQDVDV-AEVIRKPTNLLLDAAEV---GNFRFLAELIGSYPDFVHELDENGRSIFH 79 (341)
Q Consensus 8 ~~lh~aa~----~~v~~Ll~~~~~~~~~~~-~~~~~~g~tpLh~Aa~~---G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH 79 (341)
+++|.|+. +.++.|++.+.+++.... ...|.+|.||||+|+.. |+.++++.|++.+++ ++.+|.+|+||||
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G~TpLh 231 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTALH 231 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTCCCHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCCCCHHH
Confidence 55888874 377888888777654210 01356899999999997 899999999999998 6889999999999
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcc
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMK 159 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~ 159 (341)
+|+.+|+.+++++|++.|++. +.+|.+|+||||+|+..++.+++++| + +..
T Consensus 232 ~A~~~g~~~~v~~Ll~~gad~----~~~d~~G~TpL~~A~~~~~~~iv~~L--------------------l-----~~g 282 (301)
T 2b0o_E 232 YAALYNQPDCLKLLLKGRALV----GTVNEAGETALDIARKKHHKECEELL--------------------E-----QAQ 282 (301)
T ss_dssp HHHHTTCHHHHHHHHHTTCCC----SCCCTTSCCHHHHHHHHTCHHHHHHH--------------------H-----HHH
T ss_pred HHHHcCCHHHHHHHHHcCCCC----CCcCCCCCCHHHHHHHcCCHHHHHHH--------------------H-----Hhc
Confidence 999999999999999999875 45899999999999999997765544 1 112
Q ss_pred cCCCCChhHHHHHH
Q 045240 160 NYDGKTPRELFTVE 173 (341)
Q Consensus 160 n~~G~Tpl~la~~~ 173 (341)
...|.||+++|.+.
T Consensus 283 a~~g~tpLh~A~~~ 296 (301)
T 2b0o_E 283 AGTFAFPLHVDYSW 296 (301)
T ss_dssp HHTTSSCCC-----
T ss_pred CCCCCChhHHHHhc
Confidence 23689999999653
No 96
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.77 E-value=5.3e-20 Score=155.88 Aligned_cols=117 Identities=12% Similarity=0.186 Sum_probs=101.7
Q ss_pred hHHHhhhhHHHH--------HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCc------HHHHHHHHHhCCccccc
Q 045240 4 SRNIELMNNQAL--------ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGN------FRFLAELIGSYPDFVHE 69 (341)
Q Consensus 4 ~~~~~~lh~aa~--------~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~------~~~v~~Ll~~~~~~~~~ 69 (341)
.+++|++|+|+. +++++|+++|.+++..+ .+|+||||+|+..|+ .++++.|++++.+ ++.
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d-----~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~ 109 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRT-----KEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-ITA 109 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCC-----TTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSS
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCC-----CCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-CCc
Confidence 567899999974 58999999999887654 689999999999987 6899999999999 699
Q ss_pred ccccCC-cHHHHHHHcCC-----hhHHHHHHh-cCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 70 LDENGR-SIFHIAILNRH-----MNVFNLIYE-QGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 70 ~d~~G~-t~LH~Aa~~g~-----~~iv~~Ll~-~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
+|..|+ ||||+|+..+. .+++++|++ .|++. |.+|.+|+||||+|++.++.++++.|
T Consensus 110 ~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~----~~~d~~G~TpL~~A~~~~~~~~v~~L 173 (186)
T 3t8k_A 110 LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL----LIKDKWGLTALEFVKRCQKPIALKMM 173 (186)
T ss_dssp CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT----TCCCTTSCCHHHHHHTTTCHHHHHHH
T ss_pred cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC----cccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999 99999999554 469999999 89874 55999999999999999997766554
No 97
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.77 E-value=6.1e-19 Score=147.71 Aligned_cols=113 Identities=15% Similarity=0.132 Sum_probs=97.0
Q ss_pred cCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHH
Q 045240 38 RKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHL 117 (341)
Q Consensus 38 ~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~ 117 (341)
.++.+|||.|++.|+.++++.|++.++..++.+|..|+||||+|+.+|+.+++++|++.|.+. +.+|.+|+||||+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI----NVMNRGDDTPLHL 78 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTCCCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC----CCcCCCCCCHHHH
Confidence 457899999999999999999999977768899999999999999999999999999999874 5589999999999
Q ss_pred HHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHHH
Q 045240 118 AAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 118 Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
|+..|+.++++.| +..+.+++.+|.+|.||+++|...
T Consensus 79 A~~~~~~~~v~~L-------------------l~~g~~~~~~d~~g~t~L~~A~~~ 115 (179)
T 3f6q_A 79 AASHGHRDIVQKL-------------------LQYKADINAVNEHGNVPLHYACFW 115 (179)
T ss_dssp HHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHcCCHHHHHHH-------------------HHcCCCCCccCCCCCCHHHHHHHc
Confidence 9999996654433 226888999999999999999753
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.76 E-value=1.1e-19 Score=157.56 Aligned_cols=116 Identities=10% Similarity=0.089 Sum_probs=100.2
Q ss_pred HHHhhhhHHHHH----HHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHh-CCcccccccccCCcHHH
Q 045240 5 RNIELMNNQALE----LVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGS-YPDFVHELDENGRSIFH 79 (341)
Q Consensus 5 ~~~~~lh~aa~~----~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~-~~~~~~~~d~~G~t~LH 79 (341)
.+.|++|+|+.. +++.|++.+.+++. +|.+|+||||+|+..|+.++++.|++. +.+ ++.+|..|+||||
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tpL~ 145 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNG-----LDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTALH 145 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCHHH
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccc-----cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCHHH
Confidence 346899999954 99999998777554 456899999999999999999999998 666 6899999999999
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
+|+.+|+.+++++|++.|++. +.+|.+|+||||+|+..++.++++.+
T Consensus 146 ~A~~~~~~~~v~~Ll~~ga~~----~~~~~~g~t~l~~A~~~~~~~~l~~l 192 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKGART----DLRNIEKKLAFDMATNAACASLLKKK 192 (222)
T ss_dssp HHHHHTCHHHHHHHHHHTCCS----CCCCTTSCCHHHHCCSHHHHHHHC--
T ss_pred HHHHcCCHHHHHHHHHcCCCC----ccccCCCCCHHHHhcchhHHHHHHHH
Confidence 999999999999999999875 44899999999999998887666554
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.76 E-value=3.2e-18 Score=151.01 Aligned_cols=109 Identities=19% Similarity=0.122 Sum_probs=95.0
Q ss_pred HHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCccccccc-ccCCcHHH
Q 045240 5 RNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELD-ENGRSIFH 79 (341)
Q Consensus 5 ~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d-~~G~t~LH 79 (341)
.+.|++|+|+. ++++.|++ +.+++. +|.+|+||||+|+..|+.++++.|++++++ ++.+| ..|+||||
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~-----~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L~ 116 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDA-----VDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALH 116 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTC-----BCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCC-----cCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCHHH
Confidence 67899999994 48888887 555443 457899999999999999999999999999 57777 88999999
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCC
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSP 124 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~ 124 (341)
+|+.+|+.+++++|++.|++. |.+|.+|+||||+|+..++.
T Consensus 117 ~A~~~g~~~~v~~Ll~~ga~~----~~~d~~g~t~l~~A~~~~~~ 157 (244)
T 3ui2_A 117 MAAGYVRPEVVEALVELGADI----EVEDERGLTALELAREILKT 157 (244)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT----TCCCTTCCCHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHCCCCC----CCCCCCCCcHHHHHHHHHhc
Confidence 999999999999999999874 55999999999999986653
No 100
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.76 E-value=4.1e-19 Score=160.30 Aligned_cols=143 Identities=12% Similarity=0.025 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHH
Q 045240 14 ALELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLI 93 (341)
Q Consensus 14 a~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~L 93 (341)
..++.++|.+. + +..+|.+|.||||+|+..|+.++++.|++.+++ ++.. +|+||||+|+.+|+.+++++|
T Consensus 12 ~~~v~~lL~~~--~-----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~--~g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 12 SKQLKSFLSSK--D-----TFKADVHGHSASYYAIADNNVRLVCTLLNAGAL-KNLL--ENEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp HHHHHHHHHST--T-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG-GSCC--TTCCHHHHHTTSSSCHHHHHH
T ss_pred HHHHHHHHHhC--C-----CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCC--CCCCHHHHHHHcCCHHHHHHH
Confidence 34555555543 2 334667899999999999999999999999988 4555 499999999999999999999
Q ss_pred HhcCCcccchhhcccCCCCcHHHHHHHhCCCCCccccc--------------ccHHhhHHHhhhHHHHHHhhC-Ccchhc
Q 045240 94 YEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVS--------------GAALEMQRELLIYKEVEMIVQ-PSYREM 158 (341)
Q Consensus 94 l~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~--------------~~~l~~~~~l~~~~~v~~l~~-~~~~~~ 158 (341)
++.|++. |.+|.+|+||||+|+..|+.++++.|. .++++.+...+..+.++.++. +.+.
T Consensus 82 l~~ga~~----~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~-- 155 (285)
T 3kea_A 82 LFSGLDD----SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST-- 155 (285)
T ss_dssp HHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT--
T ss_pred HHCCCCC----CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc--
Confidence 9999874 558999999999999999987766551 144555555555555555552 3222
Q ss_pred ccC-CCCChhHHHHH
Q 045240 159 KNY-DGKTPRELFTV 172 (341)
Q Consensus 159 ~n~-~G~Tpl~la~~ 172 (341)
.+. +|.||+++|..
T Consensus 156 ~~~~~g~t~L~~A~~ 170 (285)
T 3kea_A 156 FDLAILLSCIHITIK 170 (285)
T ss_dssp CCCSTHHHHHHHHHH
T ss_pred ccccCCccHHHHHHH
Confidence 222 55666666543
No 101
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.76 E-value=4.7e-19 Score=165.55 Aligned_cols=144 Identities=15% Similarity=0.089 Sum_probs=99.5
Q ss_pred HHHhhhhHHHH-----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHH
Q 045240 5 RNIELMNNQAL-----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFH 79 (341)
Q Consensus 5 ~~~~~lh~aa~-----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH 79 (341)
...+++|.|+. ++++.|++++.+++..+ .+.+|.||||+|+..|+.++++.|++++++ ++.+|..|+||||
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~---~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpLh 273 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVN---GGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPLH 273 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCC---TTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccc---cccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHH
Confidence 34578888874 48888998888776543 125789999999999999999999999988 6889999999999
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcc
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMK 159 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~ 159 (341)
+|+..|+.+++++|++.|++. +.+|.+|+||||+|+..++.+++++|... -.........
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~----~~~d~~G~TpL~~A~~~g~~~iv~lLl~~----------------~~~~~~~~~~ 333 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADL----GARDSEGRDPLTIAMETANADIVTLLRLA----------------KMREAEAAQG 333 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHHHHH----------------HC--------
T ss_pred HHHHcCcHHHHHHHHHCcCCC----CCcCCCCCCHHHHHHHCCCHHHHHHHHHc----------------CCCccccccc
Confidence 999999999999999998874 55899999999999999987766554110 0122334456
Q ss_pred cCCCCChhHHHHH
Q 045240 160 NYDGKTPRELFTV 172 (341)
Q Consensus 160 n~~G~Tpl~la~~ 172 (341)
+..+.|+++++..
T Consensus 334 ~~~~~t~l~i~~~ 346 (368)
T 3jue_A 334 QAGDETYLDIFRD 346 (368)
T ss_dssp -------------
T ss_pred CCCCCCHHHHHHH
Confidence 6778888888754
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.75 E-value=1.2e-18 Score=156.78 Aligned_cols=120 Identities=9% Similarity=0.084 Sum_probs=100.4
Q ss_pred HHhhhhHHHH----HHHHHHHHHHhcCChhh-HHHHhcCCChHHHHHHHc---CcHHHHHHHHHhCCcccccccccCCcH
Q 045240 6 NIELMNNQAL----ELVKCLWKEINRQQDVD-VAEVIRKPTNLLLDAAEV---GNFRFLAELIGSYPDFVHELDENGRSI 77 (341)
Q Consensus 6 ~~~~lh~aa~----~~v~~Ll~~~~~~~~~~-~~~~~~~g~tpLh~Aa~~---G~~~~v~~Ll~~~~~~~~~~d~~G~t~ 77 (341)
..+.+|.++. +.++.+++.+.+.+... +...|..|+||||+|+.. |+.++++.|++++++ ++.+|.+|+||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCH
Confidence 3456676663 36777777777655432 334567899999999999 899999999999999 68999999999
Q ss_pred HHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 78 FHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 78 LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
||+|+.+|+.+++++|++.|++. |.+|.+|+||||+|+..|+.++++.|
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~----~~~d~~g~tpL~~A~~~~~~~~v~~L 257 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASI----EIANESGETPLDIAKRLKHEHCEELL 257 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC----CCccCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999999974 55999999999999999997766554
No 103
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.74 E-value=1.4e-18 Score=169.07 Aligned_cols=118 Identities=11% Similarity=0.062 Sum_probs=101.3
Q ss_pred hhhhHHHHH----HHHHHHHHHhcCChhh-HHHHhcCCChHHHHHHH---cCcHHHHHHHHHhCCcccccccccCCcHHH
Q 045240 8 ELMNNQALE----LVKCLWKEINRQQDVD-VAEVIRKPTNLLLDAAE---VGNFRFLAELIGSYPDFVHELDENGRSIFH 79 (341)
Q Consensus 8 ~~lh~aa~~----~v~~Ll~~~~~~~~~~-~~~~~~~g~tpLh~Aa~---~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH 79 (341)
+.+|.|+.. .++.|++.+.+++... ....|.+|.||||+|++ .|+.++++.|++++++ ++.+|.+|+||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCCcHHH
Confidence 568888854 8999999998876441 11235789999999966 9999999999999999 6999999999999
Q ss_pred HHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 80 IAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 80 ~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
+|+.+|+.+++++|++.|++. |.+|.+|+||||+|+..|+.+++++|
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~----~~~d~~g~tpl~~A~~~~~~~~~~~L 259 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALV----GTVNEAGETALDIARKKHHKECEELL 259 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCC----SCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCC----CCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999999975 55899999999999999997766555
No 104
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=1.8e-18 Score=133.36 Aligned_cols=92 Identities=23% Similarity=0.270 Sum_probs=79.6
Q ss_pred hHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCC
Q 045240 32 DVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCG 111 (341)
Q Consensus 32 ~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G 111 (341)
...+.|.+|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.|++. +.+|.+|
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~----~~~d~~g 90 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV----XAQDKFG 90 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTS
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc----cccccCC
Confidence 4566788999999999999999999999999988 6889999999999999999999999999999874 5589999
Q ss_pred CcHHHHHHHhCCCCCcc
Q 045240 112 NNILHLAAKYRSPSPYR 128 (341)
Q Consensus 112 ~TpLH~Aa~~~~~~~v~ 128 (341)
+||||+|+..|+.++++
T Consensus 91 ~tpl~~A~~~~~~~~~~ 107 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAE 107 (110)
T ss_dssp CCHHHHHHHHTCHHHHH
T ss_pred CcHHHHHHHcCCHHHHH
Confidence 99999999999866544
No 105
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.73 E-value=7.1e-18 Score=155.34 Aligned_cols=146 Identities=22% Similarity=0.222 Sum_probs=108.3
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCCh-----hhHHHHhcCCChHHHHHHHcCcHHHHHHHHHh-CCcccccccc
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQD-----VDVAEVIRKPTNLLLDAAEVGNFRFLAELIGS-YPDFVHELDE 72 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~-----~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~-~~~~~~~~d~ 72 (341)
+..+.|++|+++. ++++.+++++.+++. .+....+..|.||||+|+++|+.++++.|+++ +.+ ++.+|.
T Consensus 122 d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad-~n~~d~ 200 (337)
T 4g8k_A 122 DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDN 200 (337)
T ss_dssp CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC-TTCCCT
T ss_pred ccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC-cCccCC
Confidence 4456788888874 588888888776652 23344567788999999999999999988865 555 688888
Q ss_pred cCCcHHHHHHHcCC----hhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHH
Q 045240 73 NGRSIFHIAILNRH----MNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVE 148 (341)
Q Consensus 73 ~G~t~LH~Aa~~g~----~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~ 148 (341)
.|+|++|.++..++ .+++++|++.|++. |.+|.+|+||||+|+..|+.++ ++
T Consensus 201 ~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~----n~~d~~g~t~L~~a~~~~~~~~--------------------v~ 256 (337)
T 4g8k_A 201 MGRNALIHALLSSDDSDVEAITHLLLDHGADV----NVRGERGKTPLILAVEKKHLGL--------------------VQ 256 (337)
T ss_dssp TSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT----TCCCGGGCCHHHHHHHTTCHHH--------------------HH
T ss_pred CCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC----CCcCCCCCCHHHHHHHhhhhHH--------------------HH
Confidence 88898888776554 34778888888764 5588888999999988887553 33
Q ss_pred Hhh--CCcchhcccCCCCChhHHHHHH
Q 045240 149 MIV--QPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 149 ~l~--~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
.++ .+.+++.+|.+|+|||++|.+.
T Consensus 257 ~Ll~~~~~~vn~~d~~G~TpL~~A~~~ 283 (337)
T 4g8k_A 257 RLLEQEHIEINDTDSDGKTALLLAVEL 283 (337)
T ss_dssp HHHTSTTCCTTCBCTTSCBHHHHHHHT
T ss_pred HHHHhcCCcccCcCCCCCCHHHHHHHc
Confidence 333 3678899999999999999764
No 106
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.69 E-value=5.2e-17 Score=147.80 Aligned_cols=110 Identities=18% Similarity=0.224 Sum_probs=95.5
Q ss_pred CChHHHHHHHcCcHHHHHHHHHhCCccccc------ccccCCcHHHHHHHc---CChhHHHHHHhcCCcccchhhcccCC
Q 045240 40 PTNLLLDAAEVGNFRFLAELIGSYPDFVHE------LDENGRSIFHIAILN---RHMNVFNLIYEQGFNKQLLATYLDSC 110 (341)
Q Consensus 40 g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~------~d~~G~t~LH~Aa~~---g~~~iv~~Ll~~~~~~~~l~n~~d~~ 110 (341)
+.++||.|+..|+.+.++.|++.+++. +. .|..|+||||+|+.. |+.+++++|++.|++. |.+|.+
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv----n~~d~~ 225 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL----DAKAAD 225 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT----TCCCTT
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC----CCCCCC
Confidence 346799999999999999999999984 55 689999999999997 8999999999999864 569999
Q ss_pred CCcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHHH
Q 045240 111 GNNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 111 G~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
|+||||+|+..|+.+++++| +..+++++.+|.+|+||+++|.+.
T Consensus 226 G~TpLh~A~~~g~~~~v~~L-------------------l~~gad~~~~d~~G~TpL~~A~~~ 269 (301)
T 2b0o_E 226 GNTALHYAALYNQPDCLKLL-------------------LKGRALVGTVNEAGETALDIARKK 269 (301)
T ss_dssp CCCHHHHHHHTTCHHHHHHH-------------------HHTTCCCSCCCTTSCCHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHH-------------------HHcCCCCCCcCCCCCCHHHHHHHc
Confidence 99999999999996654433 226889999999999999999764
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.68 E-value=8.7e-17 Score=119.78 Aligned_cols=88 Identities=27% Similarity=0.306 Sum_probs=79.0
Q ss_pred HHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHHHHH
Q 045240 6 NIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIFHIA 81 (341)
Q Consensus 6 ~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~A 81 (341)
++|++|+++. +++++|++.+.+++. +|.+|+||||+|+..|+.++++.|++.+++ ++.+|.+|+||||+|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~-----~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A 75 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNA-----KDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLA 75 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTC-----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcc-----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHH
Confidence 5789999985 599999998877655 456899999999999999999999999999 689999999999999
Q ss_pred HHcCChhHHHHHHhcCCc
Q 045240 82 ILNRHMNVFNLIYEQGFN 99 (341)
Q Consensus 82 a~~g~~~iv~~Ll~~~~~ 99 (341)
+.+|+.+++++|++.|++
T Consensus 76 ~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 76 ARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHTTCHHHHHHHHHTTCC
T ss_pred HHcCCHHHHHHHHHcCCC
Confidence 999999999999998863
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.68 E-value=6.8e-17 Score=145.38 Aligned_cols=110 Identities=15% Similarity=0.185 Sum_probs=95.6
Q ss_pred ChHHHHHHHcCcHHHHHHHHHhCCcc-----cccccccCCcHHHHHHHc---CChhHHHHHHhcCCcccchhhcccCCCC
Q 045240 41 TNLLLDAAEVGNFRFLAELIGSYPDF-----VHELDENGRSIFHIAILN---RHMNVFNLIYEQGFNKQLLATYLDSCGN 112 (341)
Q Consensus 41 ~tpLh~Aa~~G~~~~v~~Ll~~~~~~-----~~~~d~~G~t~LH~Aa~~---g~~~iv~~Ll~~~~~~~~l~n~~d~~G~ 112 (341)
.++||.|++.|+.+.++.+++.+++. ++..|..|+||||+|+.+ |+.+++++|++.|++. |.+|.+|+
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i----n~~d~~g~ 206 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL----DKQTGKGS 206 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT----TCCCTTCC
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc----cccCCCCC
Confidence 47899999999999999999999885 344588999999999999 8999999999999874 66999999
Q ss_pred cHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHHH
Q 045240 113 NILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 113 TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
||||+|+..|+.++++.| +..|++++.+|.+|+||+++|.+.
T Consensus 207 TpLh~A~~~g~~~~v~~L-------------------l~~gad~~~~d~~g~tpL~~A~~~ 248 (278)
T 1dcq_A 207 TALHYCCLTDNAECLKLL-------------------LRGKASIEIANESGETPLDIAKRL 248 (278)
T ss_dssp CHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHH-------------------HHcCCCCCCccCCCCCHHHHHHHc
Confidence 999999999997654433 226899999999999999999763
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.68 E-value=1.6e-18 Score=162.51 Aligned_cols=151 Identities=16% Similarity=0.054 Sum_probs=104.5
Q ss_pred hHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcc--cccccccCCcH
Q 045240 4 SRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDF--VHELDENGRSI 77 (341)
Q Consensus 4 ~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~--~~~~d~~G~t~ 77 (341)
...+|++|+|+. +++++|++++......+ ..|.+|.||||+||++|+.++++.|++++++. .+..+.+ +||
T Consensus 90 ~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~--~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 90 IKSEVICFVAAITGCSSALDTLCLLLTSDEIVK--VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHA 166 (376)
T ss_dssp CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC----CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHH
T ss_pred CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHH--HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCH
Confidence 345699999995 49999998876321111 12335678999999999999999999999752 1222333 999
Q ss_pred HHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHH-HhCCCCCcccccc------cHHhhHHHhhhHHHHHHh
Q 045240 78 FHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAA-KYRSPSPYRTVSG------AALEMQRELLIYKEVEMI 150 (341)
Q Consensus 78 LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa-~~~~~~~v~~L~~------~~l~~~~~l~~~~~v~~l 150 (341)
||+|+.+|+.+++++|++.|++.+. +.+|.+|+||||+|+ ..|+.++++.|.. ++++.+.+.+..+.++.+
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~--~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~~~taL~~Aa~~g~~evv~lL 244 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEAT--AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFI 244 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHH--HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCccch--hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCccchHHHHHHHCCCHHHHHHH
Confidence 9999999999999999999986432 127888999999999 9999998887732 233333334444444444
Q ss_pred h-CCcchhcc
Q 045240 151 V-QPSYREMK 159 (341)
Q Consensus 151 ~-~~~~~~~~ 159 (341)
+ .+++.+.+
T Consensus 245 ~~~ga~~~~~ 254 (376)
T 2aja_A 245 ARHVNRLKEM 254 (376)
T ss_dssp HHHHHHHHHH
T ss_pred HhcCcccccc
Confidence 4 23444333
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.67 E-value=4.1e-17 Score=152.38 Aligned_cols=111 Identities=16% Similarity=0.209 Sum_probs=97.6
Q ss_pred CCChHHHHHHHc-CcHHHHHHHHHhCCccccccc--ccCCcHHHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHH
Q 045240 39 KPTNLLLDAAEV-GNFRFLAELIGSYPDFVHELD--ENGRSIFHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNIL 115 (341)
Q Consensus 39 ~g~tpLh~Aa~~-G~~~~v~~Ll~~~~~~~~~~d--~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpL 115 (341)
.+.||||.|+.. |+.++++.|++.+++ ++..| ..|+||||+|+..|+.+++++|++.|++. |.+|.+|+|||
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv----n~~d~~G~TpL 272 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD-VNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV----NQADSAGRGPL 272 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC-CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC----CCCCCCCCCHH
Confidence 456899999999 999999999999998 57787 89999999999999999999999999874 55999999999
Q ss_pred HHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHHH
Q 045240 116 HLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTVE 173 (341)
Q Consensus 116 H~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 173 (341)
|+|+..|+.+++++| +..+++++.+|.+|.||+++|.+.
T Consensus 273 h~A~~~g~~~~v~~L-------------------L~~Gad~~~~d~~G~TpL~~A~~~ 311 (368)
T 3jue_A 273 HHATILGHTGLACLF-------------------LKRGADLGARDSEGRDPLTIAMET 311 (368)
T ss_dssp HHHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHcCcHHHHHHH-------------------HHCcCCCCCcCCCCCCHHHHHHHC
Confidence 999999996654433 226889999999999999999764
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.65 E-value=1.3e-16 Score=155.19 Aligned_cols=108 Identities=18% Similarity=0.211 Sum_probs=94.7
Q ss_pred ChHHHHHHHcCcHHHHHHHHHhCCcccccc------cccCCcHHHHHHH---cCChhHHHHHHhcCCcccchhhcccCCC
Q 045240 41 TNLLLDAAEVGNFRFLAELIGSYPDFVHEL------DENGRSIFHIAIL---NRHMNVFNLIYEQGFNKQLLATYLDSCG 111 (341)
Q Consensus 41 ~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~------d~~G~t~LH~Aa~---~g~~~iv~~Ll~~~~~~~~l~n~~d~~G 111 (341)
.+.||.|+..|+.+.++.|++.+++ ++.. |..|+||||+|+. +|+.+++++|++.|++. |.+|.+|
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~-~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v----n~~d~~g 207 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL----DAKAADG 207 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC-SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT----TCCCSSS
T ss_pred HHHHHHHHhccCHHHHHHHHhhccc-ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC----CccCCCC
Confidence 4679999999999999999999988 4655 8899999999976 99999999999999874 6699999
Q ss_pred CcHHHHHHHhCCCCCcccccccHHhhHHHhhhHHHHHHhhCCcchhcccCCCCChhHHHHH
Q 045240 112 NNILHLAAKYRSPSPYRTVSGAALEMQRELLIYKEVEMIVQPSYREMKNYDGKTPRELFTV 172 (341)
Q Consensus 112 ~TpLH~Aa~~~~~~~v~~L~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 172 (341)
+||||+|+..|+.+++++| +..|++++.+|++|+||+++|..
T Consensus 208 ~TpLh~A~~~g~~~~v~~L-------------------l~~ga~~~~~d~~g~tpl~~A~~ 249 (497)
T 3lvq_E 208 NTALHYAALYNQPDCLKLL-------------------LKGRALVGTVNEAGETALDIARK 249 (497)
T ss_dssp CCHHHHHTTTTCHHHHHHH-------------------HHTCCCCSCCCTTCCCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHH-------------------HHcCCCCCCcCCCCCCHHHHHHH
Confidence 9999999999997654443 22689999999999999999965
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.64 E-value=7.5e-17 Score=124.84 Aligned_cols=104 Identities=19% Similarity=0.146 Sum_probs=89.9
Q ss_pred cchHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcH
Q 045240 2 KCSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSI 77 (341)
Q Consensus 2 k~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~ 77 (341)
++..+++++|+++. ++++.|++.+.+++. +|.+|.||||.|+..|+.++++.|++.+++ ++.+|..|+||
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-----~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tp 78 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA-----RSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTP 78 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC-----CCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-----cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCH
Confidence 56678899999985 489999988777654 446899999999999999999999999998 68999999999
Q ss_pred HHHHHHcCChhHHHHHHhcCCcccchhhcccCCCCcHH
Q 045240 78 FHIAILNRHMNVFNLIYEQGFNKQLLATYLDSCGNNIL 115 (341)
Q Consensus 78 LH~Aa~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpL 115 (341)
||+|+.+|+.+++++|++.|++. |.+|..|.||-
T Consensus 79 l~~A~~~~~~~~~~~Ll~~ga~~----n~~~~~~~~~~ 112 (115)
T 2l6b_A 79 EHLAKKNGHHEIVKLLDAKGADV----NARSWGSSHHH 112 (115)
T ss_dssp THHHHTTTCHHHHHHHHTTSSSH----HHHSCCCC---
T ss_pred HHHHHHCCCHHHHHHHHHcCCCC----CcCCccccccc
Confidence 99999999999999999999974 55899999873
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.56 E-value=2.9e-16 Score=147.07 Aligned_cols=112 Identities=16% Similarity=0.092 Sum_probs=94.8
Q ss_pred hHHHhhhhHHH----HHHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCccccc--ccccCCcH
Q 045240 4 SRNIELMNNQA----LELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHE--LDENGRSI 77 (341)
Q Consensus 4 ~~~~~~lh~aa----~~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~--~d~~G~t~ 77 (341)
..+.+++|+|+ .+++++|++++.+.+..+....+ .||||.||++|+.++++.|++++++ ++. .|.+|+||
T Consensus 126 ~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~---~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~Tp 201 (376)
T 2aja_A 126 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN---YHAFRLAAENGHLHVLNRLCELAPT-EATAMIQAENYYA 201 (376)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH---HHHHHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC---CCHHHHHHHCCCHHHHHHHHHcCCc-cchhccCCCCCCH
Confidence 46788999999 45999999998653333332222 8999999999999999999999998 455 89999999
Q ss_pred HHHHH-HcCChhHHHHHHhcCCcccchhhcccCCCCcHHHHHHHhCCCCCcccc
Q 045240 78 FHIAI-LNRHMNVFNLIYEQGFNKQLLATYLDSCGNNILHLAAKYRSPSPYRTV 130 (341)
Q Consensus 78 LH~Aa-~~g~~~iv~~Ll~~~~~~~~l~n~~d~~G~TpLH~Aa~~~~~~~v~~L 130 (341)
||+|+ .+|+.+++++|++.|+ .|+||||+|+..|+.+++++|
T Consensus 202 L~~Aa~~~G~~eiv~~Ll~~ga-----------~~~taL~~Aa~~g~~evv~lL 244 (376)
T 2aja_A 202 FRWAAVGRGHHNVINFLLDCPV-----------MLAYAEIHEFEYGEKYVNPFI 244 (376)
T ss_dssp HHHHHSTTCCHHHHHHHTTSHH-----------HHHHHHHCTTTTTTTTHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHhCCC-----------ccchHHHHHHHCCCHHHHHHH
Confidence 99999 9999999999998653 278999999999999988877
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.48 E-value=8.4e-14 Score=106.95 Aligned_cols=85 Identities=20% Similarity=0.175 Sum_probs=74.9
Q ss_pred chHHHhhhhHHHH----HHHHHHHHHHhcCChhhHHHHhcCCChHHHHHHHcCcHHHHHHHHHhCCcccccccccCCcHH
Q 045240 3 CSRNIELMNNQAL----ELVKCLWKEINRQQDVDVAEVIRKPTNLLLDAAEVGNFRFLAELIGSYPDFVHELDENGRSIF 78 (341)
Q Consensus 3 ~~~~~~~lh~aa~----~~v~~Ll~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~L 78 (341)
+..+.+++|+++. +++++|++.+.+++. +|.+|+||||+|+..|+.++++.|++++++ ++.+|..|+|||
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~-----~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl 94 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGADVAA-----KDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTAF 94 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTC-----CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCCCCc-----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCcHH
Confidence 3457899999995 499999998776654 356899999999999999999999999998 689999999999
Q ss_pred HHHHHcCChhHHHHH
Q 045240 79 HIAILNRHMNVFNLI 93 (341)
Q Consensus 79 H~Aa~~g~~~iv~~L 93 (341)
|+|+.+|+.+++++|
T Consensus 95 ~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 999999999999976
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=45.22 E-value=14 Score=21.44 Aligned_cols=19 Identities=21% Similarity=0.183 Sum_probs=16.1
Q ss_pred HHHHHHHcCcHHHHHHHHH
Q 045240 43 LLLDAAEVGNFRFLAELIG 61 (341)
Q Consensus 43 pLh~Aa~~G~~~~v~~Ll~ 61 (341)
-+..||+.|+.+.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 5789999999999998743
No 116
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=23.22 E-value=71 Score=28.33 Aligned_cols=21 Identities=10% Similarity=0.349 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 045240 276 SVLFVSIVFVLVAFFSTLFLA 296 (341)
Q Consensus 276 ~~~~~s~~~m~~af~~~~~~~ 296 (341)
.+..+|+.++..+|++|+|-+
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 456678899999999999986
No 117
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=23.02 E-value=53 Score=29.51 Aligned_cols=21 Identities=10% Similarity=0.425 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 045240 276 SVLFVSIVFVLVAFFSTLFLA 296 (341)
Q Consensus 276 ~~~~~s~~~m~~af~~~~~~~ 296 (341)
.+..+|+.++..+|++|+|-+
T Consensus 305 ~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 305 VLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 456678899999999999875
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=22.97 E-value=1.3e+02 Score=27.67 Aligned_cols=52 Identities=15% Similarity=0.252 Sum_probs=38.3
Q ss_pred HHHHHcCcHHHHHHHHHhCCcccccc-------------cccCCcHHHHHHHcCChhHHHHHHhc
Q 045240 45 LDAAEVGNFRFLAELIGSYPDFVHEL-------------DENGRSIFHIAILNRHMNVFNLIYEQ 96 (341)
Q Consensus 45 h~Aa~~G~~~~v~~Ll~~~~~~~~~~-------------d~~G~t~LH~Aa~~g~~~iv~~Ll~~ 96 (341)
...+..|+...|+.-+..+.|..... -.-|.|.+|+|.+..+.+++..|+..
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 34456788888888888776632111 13489999999999999999998873
Done!