Query 045242
Match_columns 243
No_of_seqs 143 out of 1725
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 11:15:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045242.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045242hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 99.9 2.8E-25 6E-30 194.3 25.5 229 9-238 10-242 (358)
2 PRK11272 putative DMT superfam 99.9 9.2E-21 2E-25 162.2 24.0 197 8-238 4-201 (292)
3 TIGR00950 2A78 Carboxylate/Ami 99.9 1.4E-20 3E-25 158.1 20.4 182 24-239 1-183 (260)
4 PRK15430 putative chlorampheni 99.9 3.1E-20 6.8E-25 159.3 19.3 187 8-229 4-194 (296)
5 PRK11453 O-acetylserine/cystei 99.9 2.6E-19 5.6E-24 153.8 22.3 189 14-237 6-197 (299)
6 TIGR00817 tpt Tpt phosphate/ph 99.9 5E-19 1.1E-23 152.2 23.9 182 25-237 15-198 (302)
7 TIGR00688 rarD rarD protein. T 99.8 1.5E-19 3.3E-24 151.8 19.5 163 12-209 2-170 (256)
8 PRK11689 aromatic amino acid e 99.8 1.5E-19 3.3E-24 155.0 19.4 182 10-217 2-187 (295)
9 PRK10532 threonine and homoser 99.8 2.6E-18 5.6E-23 147.2 20.6 194 5-237 5-198 (293)
10 PTZ00343 triose or hexose phos 99.8 5.3E-17 1.1E-21 142.3 23.1 198 10-238 47-253 (350)
11 PF06027 DUF914: Eukaryotic pr 99.7 4.6E-16 9.9E-21 134.2 21.7 211 7-238 8-220 (334)
12 TIGR03340 phn_DUF6 phosphonate 99.7 3.1E-16 6.7E-21 133.6 19.6 167 14-211 3-170 (281)
13 PF00892 EamA: EamA-like trans 99.6 1.6E-15 3.5E-20 112.8 10.0 125 22-154 1-125 (126)
14 COG0697 RhaT Permeases of the 99.6 1.1E-13 2.3E-18 117.3 22.1 186 9-223 4-191 (292)
15 COG2510 Predicted membrane pro 99.6 1.5E-14 3.3E-19 105.5 10.4 134 13-154 4-138 (140)
16 COG2962 RarD Predicted permeas 99.5 5.4E-12 1.2E-16 104.8 20.3 188 9-234 4-194 (293)
17 TIGR00776 RhaT RhaT L-rhamnose 99.5 1.6E-12 3.5E-17 111.2 17.4 192 13-230 2-197 (290)
18 TIGR00950 2A78 Carboxylate/Ami 99.5 1.6E-12 3.4E-17 109.1 15.4 133 9-150 125-259 (260)
19 COG5006 rhtA Threonine/homoser 99.5 5.3E-12 1.2E-16 102.6 17.2 185 13-235 13-197 (292)
20 KOG4510 Permease of the drug/m 99.4 3.4E-14 7.3E-19 116.1 1.4 207 9-236 35-241 (346)
21 PRK10532 threonine and homoser 99.4 2.3E-11 5E-16 104.2 17.4 137 10-156 146-282 (293)
22 PRK11272 putative DMT superfam 99.4 1.8E-11 3.9E-16 104.9 16.3 137 10-154 148-284 (292)
23 PLN00411 nodulin MtN21 family 99.3 1.5E-10 3.2E-15 101.7 17.1 138 11-157 188-330 (358)
24 KOG2765 Predicted membrane pro 99.3 6.1E-11 1.3E-15 101.4 12.5 112 79-211 162-273 (416)
25 PRK11689 aromatic amino acid e 99.3 1.5E-10 3.3E-15 99.3 15.2 132 11-154 155-286 (295)
26 PF13536 EmrE: Multidrug resis 99.3 2.5E-11 5.3E-16 89.4 8.2 103 46-155 2-106 (113)
27 PRK11453 O-acetylserine/cystei 99.2 9.5E-10 2.1E-14 94.5 16.5 137 11-154 142-286 (299)
28 PF08449 UAA: UAA transporter 99.2 8.2E-09 1.8E-13 88.9 21.0 188 26-235 14-205 (303)
29 TIGR03340 phn_DUF6 phosphonate 99.1 3E-10 6.5E-15 96.8 10.6 134 11-152 143-280 (281)
30 TIGR00817 tpt Tpt phosphate/ph 99.1 9.7E-10 2.1E-14 94.5 11.7 140 10-155 143-293 (302)
31 KOG1441 Glucose-6-phosphate/ph 99.0 1.9E-09 4.2E-14 92.3 10.1 185 26-239 31-221 (316)
32 PTZ00343 triose or hexose phos 98.9 5E-08 1.1E-12 85.7 15.9 138 10-154 192-347 (350)
33 TIGR00776 RhaT RhaT L-rhamnose 98.9 2.6E-08 5.6E-13 85.3 13.1 130 10-154 150-287 (290)
34 PF04142 Nuc_sug_transp: Nucle 98.9 6.4E-08 1.4E-12 80.7 15.1 152 72-235 13-165 (244)
35 COG0697 RhaT Permeases of the 98.9 9.2E-08 2E-12 80.9 15.9 134 10-154 152-286 (292)
36 PRK15430 putative chlorampheni 98.9 5.6E-08 1.2E-12 83.4 14.4 132 15-154 152-284 (296)
37 PF03151 TPT: Triose-phosphate 98.9 9.9E-08 2.1E-12 73.6 13.9 133 13-152 1-150 (153)
38 KOG2766 Predicted membrane pro 98.8 4.8E-10 1E-14 91.4 -2.8 197 9-232 15-212 (336)
39 COG5006 rhtA Threonine/homoser 98.7 3.8E-07 8.2E-12 74.7 12.3 136 10-154 146-281 (292)
40 KOG2234 Predicted UDP-galactos 98.7 2.6E-05 5.7E-10 67.1 23.2 204 12-233 15-232 (345)
41 KOG1444 Nucleotide-sugar trans 98.6 1.1E-05 2.3E-10 68.5 18.1 196 13-238 13-211 (314)
42 PF06027 DUF914: Eukaryotic pr 98.6 1.6E-06 3.5E-11 75.3 13.2 144 8-159 164-309 (334)
43 PRK15051 4-amino-4-deoxy-L-ara 98.6 5E-07 1.1E-11 66.2 8.6 71 78-154 38-108 (111)
44 KOG1443 Predicted integral mem 98.5 7.9E-06 1.7E-10 68.8 14.1 169 41-238 45-221 (349)
45 PRK02971 4-amino-4-deoxy-L-ara 98.4 8E-06 1.7E-10 61.4 11.8 118 12-154 2-121 (129)
46 KOG3912 Predicted integral mem 98.3 8.1E-05 1.8E-09 62.1 15.5 196 20-235 11-227 (372)
47 PRK13499 rhamnose-proton sympo 98.1 0.001 2.2E-08 58.0 19.5 178 9-201 4-190 (345)
48 PF06800 Sugar_transport: Suga 98.1 0.00031 6.7E-09 59.1 15.5 117 73-206 42-159 (269)
49 PF06800 Sugar_transport: Suga 98.1 5.4E-05 1.2E-09 63.6 10.8 118 8-133 134-251 (269)
50 PF08449 UAA: UAA transporter 98.0 0.0002 4.3E-09 61.7 12.8 136 13-155 155-297 (303)
51 TIGR00688 rarD rarD protein. T 97.9 0.00029 6.4E-09 59.0 13.1 106 15-124 149-255 (256)
52 KOG4314 Predicted carbohydrate 97.8 3.9E-05 8.4E-10 60.9 5.8 98 88-211 64-161 (290)
53 COG2962 RarD Predicted permeas 97.7 0.0023 4.9E-08 53.9 15.1 127 18-154 154-282 (293)
54 KOG1442 GDP-fucose transporter 97.7 0.0003 6.5E-09 58.6 8.5 172 40-237 60-238 (347)
55 KOG4510 Permease of the drug/m 97.6 2.5E-05 5.4E-10 64.7 1.9 137 10-155 189-325 (346)
56 PF05653 Mg_trans_NIPA: Magnes 97.6 0.00041 8.9E-09 59.7 9.0 117 9-154 4-121 (300)
57 KOG2765 Predicted membrane pro 97.6 0.00064 1.4E-08 59.0 9.9 143 9-157 244-392 (416)
58 PF04657 DUF606: Protein of un 97.4 0.0036 7.9E-08 47.6 10.7 129 15-152 4-138 (138)
59 KOG1581 UDP-galactose transpor 97.4 0.033 7.2E-07 47.3 17.2 173 40-235 50-223 (327)
60 KOG1441 Glucose-6-phosphate/ph 97.3 0.001 2.2E-08 57.4 7.7 138 9-154 160-306 (316)
61 PRK13499 rhamnose-proton sympo 97.2 0.02 4.4E-07 50.0 15.3 144 9-154 171-340 (345)
62 PRK10452 multidrug efflux syst 97.2 0.0015 3.2E-08 48.3 6.9 68 81-154 34-102 (120)
63 PRK09541 emrE multidrug efflux 97.2 0.0022 4.8E-08 46.7 7.4 67 82-154 35-102 (110)
64 PRK10650 multidrug efflux syst 97.2 0.012 2.5E-07 42.8 11.1 64 84-153 42-106 (109)
65 COG4975 GlcU Putative glucose 97.0 0.00013 2.8E-09 59.8 -0.4 189 13-228 3-195 (288)
66 COG2076 EmrE Membrane transpor 97.0 0.0032 7E-08 45.2 6.8 66 83-154 36-102 (106)
67 COG5070 VRG4 Nucleotide-sugar 97.0 0.011 2.3E-07 48.2 10.0 185 28-238 22-209 (309)
68 PF10639 UPF0546: Uncharacteri 97.0 0.0021 4.5E-08 46.9 5.4 110 18-153 2-112 (113)
69 PRK11431 multidrug efflux syst 96.9 0.006 1.3E-07 44.0 7.4 65 84-154 36-101 (105)
70 KOG1580 UDP-galactose transpor 96.7 0.022 4.7E-07 46.8 10.2 172 41-237 53-225 (337)
71 PF00893 Multi_Drug_Res: Small 96.6 0.006 1.3E-07 43.1 5.5 57 83-145 35-92 (93)
72 PF06379 RhaT: L-rhamnose-prot 96.5 0.18 4E-06 43.7 14.6 181 9-204 4-192 (344)
73 KOG2922 Uncharacterized conser 96.5 0.0016 3.5E-08 55.5 2.0 125 9-162 18-142 (335)
74 KOG1581 UDP-galactose transpor 96.4 0.037 8E-07 47.0 9.9 141 9-157 169-315 (327)
75 PF07857 DUF1632: CEO family ( 96.4 0.061 1.3E-06 45.1 11.0 187 13-210 1-208 (254)
76 TIGR00803 nst UDP-galactose tr 96.3 0.015 3.2E-07 47.6 6.8 58 88-151 163-220 (222)
77 KOG1583 UDP-N-acetylglucosamin 96.0 0.012 2.7E-07 49.3 4.8 172 42-227 34-207 (330)
78 COG3238 Uncharacterized protei 95.8 0.19 4.1E-06 38.6 10.4 137 13-153 6-144 (150)
79 KOG1580 UDP-galactose transpor 95.6 0.099 2.1E-06 43.0 8.6 136 12-154 172-312 (337)
80 KOG1444 Nucleotide-sugar trans 95.4 0.19 4E-06 43.1 9.7 138 11-155 156-300 (314)
81 PF03151 TPT: Triose-phosphate 94.9 0.12 2.6E-06 39.4 7.0 55 186-240 1-61 (153)
82 KOG1443 Predicted integral mem 94.8 0.8 1.7E-05 39.3 11.8 138 9-153 161-313 (349)
83 COG4975 GlcU Putative glucose 94.3 0.0043 9.4E-08 51.1 -2.6 136 9-154 149-284 (288)
84 PF04142 Nuc_sug_transp: Nucle 94.0 1.3 2.8E-05 37.0 11.7 125 9-133 111-237 (244)
85 COG5070 VRG4 Nucleotide-sugar 93.8 0.59 1.3E-05 38.3 8.6 139 12-157 155-298 (309)
86 KOG1582 UDP-galactose transpor 92.7 0.24 5.3E-06 41.7 5.1 187 23-238 54-244 (367)
87 KOG1442 GDP-fucose transporter 89.9 0.52 1.1E-05 39.8 4.3 141 11-158 184-330 (347)
88 KOG2234 Predicted UDP-galactos 89.6 12 0.00027 32.7 12.6 141 8-154 179-321 (345)
89 KOG4831 Unnamed protein [Funct 88.3 0.93 2E-05 32.5 4.0 110 16-153 7-123 (125)
90 PF00892 EamA: EamA-like trans 88.2 0.62 1.3E-05 33.5 3.4 42 195-238 1-42 (126)
91 KOG1582 UDP-galactose transpor 87.4 4.1 8.9E-05 34.5 8.0 138 13-157 191-334 (367)
92 COG2510 Predicted membrane pro 85.1 5.2 0.00011 29.9 6.7 52 186-238 4-55 (140)
93 KOG1583 UDP-N-acetylglucosamin 82.6 15 0.00033 31.3 9.2 132 12-154 164-313 (330)
94 TIGR00803 nst UDP-galactose tr 79.6 26 0.00057 28.3 9.8 100 106-211 7-111 (222)
95 KOG3912 Predicted integral mem 79.2 21 0.00045 30.6 8.9 141 8-154 172-333 (372)
96 KOG2766 Predicted membrane pro 74.3 3.4 7.3E-05 34.7 3.0 135 9-154 163-298 (336)
97 PF04657 DUF606: Protein of un 69.9 29 0.00063 26.1 7.1 53 186-238 2-54 (138)
98 COG3238 Uncharacterized protei 61.3 62 0.0013 24.9 7.4 56 184-239 4-59 (150)
99 PF04342 DUF486: Protein of un 60.8 60 0.0013 23.4 7.1 30 118-153 77-106 (108)
100 PRK02237 hypothetical protein; 60.6 13 0.00029 26.8 3.4 37 112-154 68-104 (109)
101 PF02694 UPF0060: Uncharacteri 58.4 12 0.00026 26.9 2.8 37 112-154 66-102 (107)
102 PF07857 DUF1632: CEO family ( 56.3 70 0.0015 26.9 7.6 68 135-205 177-246 (254)
103 PF06570 DUF1129: Protein of u 54.1 1.1E+02 0.0025 24.5 11.1 47 75-125 145-191 (206)
104 COG4657 RnfA Predicted NADH:ub 50.5 97 0.0021 24.2 6.8 52 181-232 128-184 (193)
105 PF06168 DUF981: Protein of un 47.8 1.5E+02 0.0032 23.9 13.6 109 39-156 4-115 (191)
106 COG4858 Uncharacterized membra 47.8 1.5E+02 0.0032 23.9 9.3 117 13-136 101-217 (226)
107 PF11168 DUF2955: Protein of u 43.9 1.4E+02 0.003 22.5 7.1 22 109-130 19-40 (140)
108 PF05915 DUF872: Eukaryotic pr 38.0 1.3E+02 0.0029 21.9 5.8 12 186-197 76-87 (115)
109 COG3086 RseC Positive regulato 37.3 56 0.0012 25.0 3.7 32 100-132 71-102 (150)
110 PRK10862 SoxR reducing system 36.1 48 0.001 25.5 3.4 26 100-125 71-96 (154)
111 PF05297 Herpes_LMP1: Herpesvi 35.3 13 0.00027 31.8 0.0 15 180-194 102-116 (381)
112 PF00689 Cation_ATPase_C: Cati 34.9 2.1E+02 0.0045 22.0 8.1 114 39-154 4-143 (182)
113 PF06570 DUF1129: Protein of u 34.0 2.5E+02 0.0054 22.5 10.4 23 184-206 178-200 (206)
114 PF09945 DUF2177: Predicted me 33.2 1.9E+02 0.004 21.6 5.9 42 189-232 80-121 (128)
115 PRK11715 inner membrane protei 32.4 3.5E+02 0.0076 24.7 8.7 14 186-199 386-399 (436)
116 PF04246 RseC_MucC: Positive r 31.4 47 0.001 24.7 2.6 25 101-125 65-89 (135)
117 COG1742 Uncharacterized conser 28.7 34 0.00074 24.5 1.3 37 112-154 67-103 (109)
118 COG5202 Predicted membrane pro 27.8 4.4E+02 0.0096 23.6 9.8 160 37-232 16-185 (512)
119 PF09656 PGPGW: Putative trans 27.5 1.6E+02 0.0035 18.3 5.2 44 140-210 6-49 (53)
120 COG2246 Predicted membrane pro 27.2 2.7E+02 0.0059 20.9 8.2 60 71-134 8-69 (139)
121 PF13127 DUF3955: Protein of u 27.0 1.8E+02 0.0039 18.7 4.6 52 183-234 4-59 (63)
122 PF07698 7TM-7TMR_HD: 7TM rece 26.2 3.2E+02 0.0069 21.3 15.5 9 106-114 60-68 (194)
123 PF10754 DUF2569: Protein of u 25.5 3E+02 0.0065 20.8 8.2 31 180-210 116-146 (149)
124 COG0670 Integral membrane prot 25.0 4E+02 0.0086 22.1 21.0 114 70-210 82-196 (233)
125 PF11139 DUF2910: Protein of u 24.4 3.7E+02 0.0081 21.5 9.8 45 110-154 159-210 (214)
126 PF03595 SLAC1: Voltage-depend 24.2 3.7E+02 0.0081 22.9 7.3 42 140-199 7-48 (330)
127 PRK12671 putative monovalent c 23.3 3.1E+02 0.0068 20.2 5.6 16 183-198 50-65 (120)
128 KOG3817 Uncharacterized conser 23.0 4.3E+02 0.0092 23.6 7.1 82 23-110 200-284 (452)
129 CHL00196 psbY photosystem II p 22.9 1.6E+02 0.0035 16.7 4.0 22 184-205 5-26 (36)
130 PF05653 Mg_trans_NIPA: Magnes 21.9 1.3E+02 0.0028 25.9 3.9 31 181-211 3-33 (300)
131 PF04156 IncA: IncA protein; 21.9 1.6E+02 0.0034 23.2 4.2 17 140-156 13-29 (191)
132 PRK12592 putative monovalent c 20.3 3.7E+02 0.0081 20.0 6.3 16 183-198 46-61 (126)
133 PF12292 DUF3624: Protein of u 20.0 2.9E+02 0.0063 18.6 4.4 44 16-60 25-68 (77)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.95 E-value=2.8e-25 Score=194.34 Aligned_cols=229 Identities=29% Similarity=0.440 Sum_probs=180.4
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRK-VRPKMTLSIFVKILLLGLLEP 87 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 87 (243)
++.+.++.++...+.++...++.|.+++.+++|..+.++|+.+++++++|+++.++|+ +.++.+++++..+.+.|+++
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g- 88 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG- 88 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-
Confidence 3667999999999999999999999999999999999999999999999988765442 23444678888999999998
Q ss_pred HHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCC
Q 045242 88 TIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTN 167 (243)
Q Consensus 88 ~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~ 167 (243)
..++.+++.|++++++++++++.++.|+++++++++++.|+++.++|.+++|++|++++++|+.++...+++.....+++
T Consensus 89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~ 168 (358)
T PLN00411 89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSP 168 (358)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence 77888999999999999999999999999999999996666666666666679999999999999864444211100000
Q ss_pred --CccCcCCC-CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhcc
Q 045242 168 --HNYHQEST-SNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIVALFLER 238 (243)
Q Consensus 168 --~~~~~~~~-~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (243)
-|..+... +.....+...|+.++++++++||+|++.+|+..+++|++...++|++.++++...+.....++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~ 242 (358)
T PLN00411 169 PYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEK 242 (358)
T ss_pred ccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 00000000 011123346799999999999999999999998888755677888998888888877777654
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.89 E-value=9.2e-21 Score=162.25 Aligned_cols=197 Identities=17% Similarity=0.207 Sum_probs=160.5
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Q 045242 8 YIRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEP 87 (243)
Q Consensus 8 ~~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 87 (243)
.+...-....+...++||.++++.|... ++.||.+++++|+.+++++++++...++ ++ ..+++++......|.++.
T Consensus 4 ~~~~~~~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~-~~--~~~~~~~~~~~~~g~~~~ 79 (292)
T PRK11272 4 RQLLPLFGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAFLLLRG-HP--LPTLRQWLNAALIGLLLL 79 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHhC-CC--CCcHHHHHHHHHHHHHHH
Confidence 3444566778899999999999999985 4799999999999999999988765432 22 235677888888898887
Q ss_pred HHHHHHHHHhh-cccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCC
Q 045242 88 TIDQNLFYTGM-KYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWT 166 (243)
Q Consensus 88 ~~~~~~~~~~l-~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~ 166 (243)
..++.+++.+. ++++++.++++.++.|+++.+++.+ +|||+++++ +.|.+++++|+.++. .++
T Consensus 80 ~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~-~~~-------- 143 (292)
T PRK11272 80 AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLN-SGG-------- 143 (292)
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHh-cCc--------
Confidence 78888999999 9999999999999999999999985 699999996 999999999998885 111
Q ss_pred CCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhcc
Q 045242 167 NHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIVALFLER 238 (243)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (243)
..+....|++++++++++||.|.+..||..++ ++...+.+++..+++.+.+.....+.
T Consensus 144 ------------~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (292)
T PRK11272 144 ------------NLSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGE 201 (292)
T ss_pred ------------ccccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 01223579999999999999999999996543 34567789999999988888765543
No 3
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.87 E-value=1.4e-20 Score=158.09 Aligned_cols=182 Identities=18% Similarity=0.209 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCh
Q 045242 24 YAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTTA 103 (243)
Q Consensus 24 ~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~ 103 (243)
||.+++..|..+++..|+..+.+.|+..+.+++.++... + .+++++.+....|.++..+++.+++.|++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 899999999987777999999999999998888876432 1 244557778888888889999999999999999
Q ss_pred hhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcc
Q 045242 104 TFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSP 183 (243)
Q Consensus 104 ~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (243)
++++++.++.|+++++++++++|||+++++ +.|++++++|+.++. .++ ..+.+
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~-~~~--------------------~~~~~ 126 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLL-SDG--------------------NLSIN 126 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhc-cCC--------------------ccccc
Confidence 999999999999999999999999999996 999999999999985 211 11234
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHHhccC
Q 045242 184 IKGALMITIGCFSWAGFMVLQAITLKSYP-TELSLTALICLMGTIEGTIVALFLERG 239 (243)
Q Consensus 184 ~~G~~~~llaal~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (243)
..|+.++++++++|+.+.+..|+..++.+ ++.....+++.++.+...+.....+++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN 183 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 68999999999999999999999887763 234555578999999999888765543
No 4
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.86 E-value=3.1e-20 Score=159.26 Aligned_cols=187 Identities=11% Similarity=-0.010 Sum_probs=143.1
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC--C-CCCHHHHHHHHHHHH
Q 045242 8 YIRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVR--P-KMTLSIFVKILLLGL 84 (243)
Q Consensus 8 ~~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~--~-~~~~~~~~~~~~~g~ 84 (243)
+++.||.+++++++++||.+++..|.. . +++|.++.++|+.++.+++.++...+++++. + ..+++++. ....+.
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 80 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAVSA 80 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHHHH
Confidence 467789999999999999999999986 4 5999999999999999888876544321111 0 11334333 344666
Q ss_pred HHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCC
Q 045242 85 LEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLP 164 (243)
Q Consensus 85 ~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~ 164 (243)
++.+.++.++++|++++++++++++.++.|+++.+++++++|||+++++ +.|++++++|+.++. .++
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~-~~~------ 147 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQL-WTF------ 147 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHH-HHc------
Confidence 7678899999999999999999999999999999999999999999997 999999999999985 211
Q ss_pred CCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHH
Q 045242 165 WTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYP-TELSLTALICLMGTIEG 229 (243)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~ 229 (243)
++. ..++++++++||.|.+..|+..++.. +....+.+++..+....
T Consensus 148 ---------------~~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (296)
T PRK15430 148 ---------------GSL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYL 194 (296)
T ss_pred ---------------CCc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 111 14678899999999999988643321 22344455555555443
No 5
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.85 E-value=2.6e-19 Score=153.80 Aligned_cols=189 Identities=16% Similarity=0.231 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 045242 14 FLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNL 93 (243)
Q Consensus 14 ~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 93 (243)
.++.++++++||.++++.|..++ ++||.++.++|+.++++.++++. . ++ +.+++ .....|+......+.+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~--~-~~---~~~~~---~~~~~g~~~~~~~~~~ 75 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFV--A-RP---KVPLN---LLLGYGLTISFGQFAF 75 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHh--c-CC---CCchH---HHHHHHHHHHHHHHHH
Confidence 35688899999999999999864 59999999999999887766543 1 11 11222 3444455554566667
Q ss_pred HHHhhcc-cChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCc
Q 045242 94 FYTGMKY-TTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQ 172 (243)
Q Consensus 94 ~~~~l~~-~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 172 (243)
++.++++ .++++++++.++.|+++.+++++++|||+++++ ++|.+++++|+.++. .++
T Consensus 76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~-~~~-------------- 134 (299)
T PRK11453 76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLI-EDS-------------- 134 (299)
T ss_pred HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhc-ccc--------------
Confidence 8889988 588999999999999999999999999999996 999999999999986 111
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHhc
Q 045242 173 ESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPT--ELSLTALICLMGTIEGTIVALFLE 237 (243)
Q Consensus 173 ~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 237 (243)
.+.......|+.++++++++|+.|.+.+|+..++.++ ......+++..+.+.........+
T Consensus 135 ----~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (299)
T PRK11453 135 ----LNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILD 197 (299)
T ss_pred ----CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhc
Confidence 0111223479999999999999999999997765532 234456666666655554444333
No 6
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.85 E-value=5e-19 Score=152.19 Aligned_cols=182 Identities=16% Similarity=0.169 Sum_probs=151.7
Q ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccChh
Q 045242 25 AGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTTAT 104 (243)
Q Consensus 25 a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~ 104 (243)
....+..|.++++-.+|..+++.|+..+.+...+. +....+++++.+++++...+..|++. +.++.+.+.++++++++
T Consensus 15 ~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s 92 (302)
T TIGR00817 15 VYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLS-WSSGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVS 92 (302)
T ss_pred HHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHH-HHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHH
Confidence 34446788887654679999999999988776654 21122333457888999999999997 88899999999999999
Q ss_pred hhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcch
Q 045242 105 FTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPI 184 (243)
Q Consensus 105 ~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (243)
.++++.++.|+++++++++++|||+++++ +.|++++++|+.+.. . .+.+...
T Consensus 93 ~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~--~--------------------~~~~~~~ 144 (302)
T TIGR00817 93 FTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALAS--D--------------------TELSFNW 144 (302)
T ss_pred HHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhc--C--------------------CcccccH
Confidence 99999999999999999999999999996 999999999998653 1 1112345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--cCCchhHHHHHHHHHHHHHHHHHHHHhc
Q 045242 185 KGALMITIGCFSWAGFMVLQAITLK--SYPTELSLTALICLMGTIEGTIVALFLE 237 (243)
Q Consensus 185 ~G~~~~llaal~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (243)
.|++++++|+++|+.|.+..||..+ +. |+...+.|++..+++.++|.....|
T Consensus 145 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~ 198 (302)
T TIGR00817 145 AGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITE 198 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHc
Confidence 7999999999999999999999887 56 6899999999999999999987665
No 7
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.85 E-value=1.5e-19 Score=151.82 Aligned_cols=163 Identities=14% Similarity=0.167 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCC-----CCCCCHHH-HHHHHHHHHH
Q 045242 12 KPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKV-----RPKMTLSI-FVKILLLGLL 85 (243)
Q Consensus 12 ~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~ 85 (243)
||++++++++++||.++++.|.. . ++||.++.++|++++++++.++...+++++ .++.++++ +......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-K-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-c-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 58899999999999999999985 4 499999999999999988877654433211 11122222 4445666666
Q ss_pred HHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCC
Q 045242 86 EPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPW 165 (243)
Q Consensus 86 ~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~ 165 (243)
. ..++.+++++++++++++++++.++.|+++++++++++|||+++++ +.+++++++|+.++...++
T Consensus 80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~------- 145 (256)
T TIGR00688 80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG------- 145 (256)
T ss_pred H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence 4 8999999999999999999999999999999999999999999996 9999999999998852111
Q ss_pred CCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045242 166 TNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLK 209 (243)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~ 209 (243)
+.. .++++++++|+.|.+..|+..+
T Consensus 146 ---------------~~~----~~~l~aa~~~a~~~i~~~~~~~ 170 (256)
T TIGR00688 146 ---------------SLP----WEALVLAFSFTAYGLIRKALKN 170 (256)
T ss_pred ---------------Cch----HHHHHHHHHHHHHHHHHhhcCC
Confidence 111 3578899999999999998544
No 8
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.85 E-value=1.5e-19 Score=154.98 Aligned_cols=182 Identities=14% Similarity=0.113 Sum_probs=135.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 045242 10 RAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTI 89 (243)
Q Consensus 10 ~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 89 (243)
+.+++++++.++++||.+++..|..+ +++||..+.++|+.+++++++++. .+++.++.+ .+....+.++...
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~~~----~~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLTV---GFPRLRQFP----KRYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHHc---ccccccccc----HHHHHHHhHHHHH
Confidence 46778899999999999999999995 469999999999999999988753 112111112 2233445555577
Q ss_pred HHHHHHHhhc----ccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCC
Q 045242 90 DQNLFYTGMK----YTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPW 165 (243)
Q Consensus 90 ~~~~~~~~l~----~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~ 165 (243)
++.+++.+++ ..++++++++.++.|+++.+++++++|||+++++ +.|++++++|+.++. .+++.
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~-~~~~~----- 141 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVL-GGDNG----- 141 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhhee-cCCcc-----
Confidence 7777777775 4577888999999999999999999999999996 999999999999986 22100
Q ss_pred CCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHH
Q 045242 166 TNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSL 217 (243)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~ 217 (243)
....+ ......+...|++++++|++|||.|+++.||..++. ++...
T Consensus 142 ----~~~~~-~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~ 187 (295)
T PRK11689 142 ----LSLAE-LINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITL 187 (295)
T ss_pred ----chhhh-hhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhH
Confidence 00000 000111235699999999999999999999987665 45543
No 9
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.82 E-value=2.6e-18 Score=147.20 Aligned_cols=194 Identities=13% Similarity=0.113 Sum_probs=151.4
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHH
Q 045242 5 ARFYIRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGL 84 (243)
Q Consensus 5 ~~~~~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 84 (243)
-++.++.+++.+++++.++|+.++.+.|..+++ .||..+.++|+.+++++++++... ++ .+.+++++......|+
T Consensus 5 ~~~~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~ 79 (293)
T PRK10532 5 LRKLPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGV 79 (293)
T ss_pred ccccccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHH
Confidence 344566889999999999999999999999654 999999999999999998876422 12 1345677778888888
Q ss_pred HHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCC
Q 045242 85 LEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLP 164 (243)
Q Consensus 85 ~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~ 164 (243)
+. +..+.+++++++++|++.++.+.++.|+++.+++. |++. +..++.++++|+.++. ..+
T Consensus 80 ~~-~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~-~~~------ 139 (293)
T PRK10532 80 SL-GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLL-PLG------ 139 (293)
T ss_pred HH-HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheee-ecC------
Confidence 75 77888999999999999999999999999988763 4432 2556778899998874 211
Q ss_pred CCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhc
Q 045242 165 WTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIVALFLE 237 (243)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (243)
.+.+.....|+++.++++++||.|.+..|+..++.+ +... .++...+++.+.|.....+
T Consensus 140 ------------~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~ 198 (293)
T PRK10532 140 ------------QDVSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQA 198 (293)
T ss_pred ------------CCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHcc
Confidence 011123457999999999999999999999877764 6555 5677778888888776544
No 10
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.79 E-value=5.3e-17 Score=142.31 Aligned_cols=198 Identities=16% Similarity=0.153 Sum_probs=154.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC--CHHHHHHHHHHHHHH
Q 045242 10 RAKPFLAVILLQFGYAGMSIFSKFALNKGMS-PHVFAVYRHAVATIVVAPFALILDRKVRPKM--TLSIFVKILLLGLLE 86 (243)
Q Consensus 10 ~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 86 (243)
+.+...+++..-.+-.......|.+++. +| |..++.+|++++.++...+.. ...+++++. .++++..++..|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 4556666666666666777888888754 89 999999999999877654432 212222233 345688899999998
Q ss_pred HHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCC
Q 045242 87 PTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWT 166 (243)
Q Consensus 87 ~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~ 166 (243)
.. .+...+.|+++++++.++++.++.|+++++++++++|||+++++ +.++++++.|+.+... +
T Consensus 125 ~~-~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~-~--------- 187 (350)
T PTZ00343 125 LF-VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASV-K--------- 187 (350)
T ss_pred HH-HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheec-c---------
Confidence 54 46667799999999999999999999999999999999999996 9999999999999861 1
Q ss_pred CCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCC------chhHHHHHHHHHHHHHHHHHHHHhcc
Q 045242 167 NHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYP------TELSLTALICLMGTIEGTIVALFLER 238 (243)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (243)
+.+....|++++++|+++|+.+++..|+..++.+ ++.....++..++++.++|+..+.|.
T Consensus 188 ------------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~ 253 (350)
T PTZ00343 188 ------------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEG 253 (350)
T ss_pred ------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1122467999999999999999999999887531 24456666788999999999876543
No 11
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.75 E-value=4.6e-16 Score=134.18 Aligned_cols=211 Identities=21% Similarity=0.308 Sum_probs=165.3
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCHHHHHHHHHHHH
Q 045242 7 FYIRAKPFLAVILLQFGYAGMSIFSKFALNKGMS-PHVFAVYRHAVATIVVAPFALILDRK-VRPKMTLSIFVKILLLGL 84 (243)
Q Consensus 7 ~~~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 84 (243)
.++-++..++.-+.+++-+.+.+.....-+++.+ |..-+++-+..-.++..+....+.++ +..+..++.|++.+++++
T Consensus 8 ~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~ 87 (334)
T PF06027_consen 8 TRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLAL 87 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHH
Confidence 3455667777777888888888888877555554 65566666655555555654443222 222233456888899999
Q ss_pred HHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCC
Q 045242 85 LEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLP 164 (243)
Q Consensus 85 ~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~ 164 (243)
+. ..++.+...|++|++.+.+.++..+.-+++++++++++|||+++.+ +.|+++++.|+.++...+..
T Consensus 88 ~D-v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~----- 155 (334)
T PF06027_consen 88 LD-VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVL----- 155 (334)
T ss_pred HH-HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeeccc-----
Confidence 98 8999999999999999999999999999999999999999999997 99999999999998643321
Q ss_pred CCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhcc
Q 045242 165 WTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIVALFLER 238 (243)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (243)
.+ +++..+.+...||+++++|+++||.+++..++..++.+ ......+..++|.++..+...+.|.
T Consensus 156 -------~~-~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~ 220 (334)
T PF06027_consen 156 -------SG-SDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILER 220 (334)
T ss_pred -------cc-ccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheeh
Confidence 00 01223567799999999999999999999999999884 7889999999999999988887765
No 12
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.74 E-value=3.1e-16 Score=133.58 Aligned_cols=167 Identities=11% Similarity=0.099 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 045242 14 FLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILD-RKVRPKMTLSIFVKILLLGLLEPTIDQN 92 (243)
Q Consensus 14 ~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (243)
..+.+.++++|+...+..|... ++.++ ..+++...+.+++.|+...+. ++.++..+++ ++.....+.++...++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~-~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHA-DKEPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPAT-FWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC-CchhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchh-hHHHHHHHHHHHHHHHH
Confidence 5678899999999999999663 33444 347777788888888766532 2223333334 44455556666689999
Q ss_pred HHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCc
Q 045242 93 LFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQ 172 (243)
Q Consensus 93 ~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 172 (243)
++++++++.++++++.+.++.|+++++++++++|||+++++ +.|+.+++.|+.++. .++
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~-~~~-------------- 137 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLG-LSR-------------- 137 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHh-ccc--------------
Confidence 99999999999999999999999999999999999999997 999999999999885 211
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 045242 173 ESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSY 211 (243)
Q Consensus 173 ~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~ 211 (243)
. ...+..|+.++++++++|+.|.+..|+..++.
T Consensus 138 ----~--~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~ 170 (281)
T TIGR03340 138 ----F--AQHRRKAYAWALAAALGTAIYSLSDKAAALGV 170 (281)
T ss_pred ----c--cccchhHHHHHHHHHHHHHHhhhhccccccch
Confidence 0 11224688899999999999999988765444
No 13
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.64 E-value=1.6e-15 Score=112.82 Aligned_cols=125 Identities=28% Similarity=0.544 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 045242 22 FGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTGMKYT 101 (243)
Q Consensus 22 ~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 101 (243)
++||.+.++.|...+ +.||....++|+..+++ ++++....++++..+.+++++......+.++...++.+++++++++
T Consensus 1 ~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLK-KISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhc-cCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 469999999999954 59999999999999998 6666666555444567778888899999997799999999999999
Q ss_pred ChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 102 TATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 102 ~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
+++.++.+.+++|+++.+++++++||++++++ +.|+++++.|+.++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999996 999999999999874
No 14
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.63 E-value=1.1e-13 Score=117.33 Aligned_cols=186 Identities=20% Similarity=0.334 Sum_probs=140.8
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPT 88 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 88 (243)
+...+....++..+.|+......|....+..++....+.|...+.++..+.... ++....+..++ +.+....+.++..
T Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~ 81 (292)
T COG0697 4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EPRGLRPALRP-WLLLLLLALLGLA 81 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hcccccccccc-hHHHHHHHHHHHH
Confidence 455677888888899999999999985433677777777999998885543322 11111112222 4566777777779
Q ss_pred HHHHHHHHhhcccChhhhhhhccchhHHHHHHHH-HHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCC
Q 045242 89 IDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAW-IIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTN 167 (243)
Q Consensus 89 ~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~-~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~ 167 (243)
.+..+++.++++++++.++.+.++.|+++.++++ ++++||+++++ +.+.++++.|+.++. .++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~-~~~~-------- 146 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLIL-LGGG-------- 146 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhee-cCCC--------
Confidence 9999999999999999999999999999999997 77799999996 999999999999996 2210
Q ss_pred CccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHH-HHHH
Q 045242 168 HNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSLTA-LICL 223 (243)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~-~~~~ 223 (243)
..... ...|+.+.++++++|+.+.+..|+.. +. ++..... ++..
T Consensus 147 ---------~~~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~ 191 (292)
T COG0697 147 ---------GGGIL-SLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLL 191 (292)
T ss_pred ---------cchhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHH
Confidence 00001 57899999999999999999999977 54 3445554 4444
No 15
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.59 E-value=1.5e-14 Score=105.51 Aligned_cols=134 Identities=18% Similarity=0.279 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHH
Q 045242 13 PFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVR-PKMTLSIFVKILLLGLLEPTIDQ 91 (243)
Q Consensus 13 ~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~ 91 (243)
..++.++++++||...++.|..+ ++.||..-++.|..+..+++..++....+.+. ...+.|.|..+.+.|+.+ +...
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glsw 81 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSW 81 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHH
Confidence 57889999999999999999996 56999999999999999988887766554332 225778788888888666 9999
Q ss_pred HHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 92 NLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 92 ~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
.+||.+++...++.+..+..++|+++++++++++|||++.++ ++|+++..+|++++.
T Consensus 82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs 138 (140)
T COG2510 82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence 999999999999999999999999999999999999999997 999999999998764
No 16
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.51 E-value=5.4e-12 Score=104.82 Aligned_cols=188 Identities=14% Similarity=0.099 Sum_probs=143.6
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC---CCCCHHHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVR---PKMTLSIFVKILLLGLL 85 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~ 85 (243)
+..+|+++.+.+.++||..+...|.. +..++.++...|.+.+..++..+....++.+. ...+++.+..+.+.+..
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 45789999999999999999999998 45999999999999999998876655433221 11244556666666666
Q ss_pred HHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCC
Q 045242 86 EPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPW 165 (243)
Q Consensus 86 ~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~ 165 (243)
. +.+...|.+++..-.+-++|.=.+..|++.++++.+++|||+++.| ++++.++.+|+...+...|
T Consensus 82 i-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g------- 147 (293)
T COG2962 82 I-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLG------- 147 (293)
T ss_pred H-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence 5 9999999999999999999999999999999999999999999997 9999999999999974332
Q ss_pred CCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHH
Q 045242 166 TNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIVAL 234 (243)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (243)
+.+ ..++.=+++|+.|-..-|+ .+ . |..+-....++.-....+...+
T Consensus 148 --------------~lp-----wval~la~sf~~Ygl~RK~-~~-v-~a~~g~~lE~l~l~p~al~yl~ 194 (293)
T COG2962 148 --------------SLP-----WVALALALSFGLYGLLRKK-LK-V-DALTGLTLETLLLLPVALIYLL 194 (293)
T ss_pred --------------CCc-----HHHHHHHHHHHHHHHHHHh-cC-C-chHHhHHHHHHHHhHHHHHHHH
Confidence 112 1345667899999987444 33 2 3444444455444444444433
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.50 E-value=1.6e-12 Score=111.18 Aligned_cols=192 Identities=16% Similarity=0.131 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 045242 13 PFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQN 92 (243)
Q Consensus 13 ~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (243)
+++++++++++||..++..|.. . +.++.++. |..++.+++..+....++++ +..++.+..-+..|.. ...++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~-~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~-w~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKI-G-GGPYSQTL--GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAF-WALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhcc-C-CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHH-HHhhhh
Confidence 4678999999999999999998 4 68888876 78788777766544433221 1223434434444444 588999
Q ss_pred HHHHhhcccChhhhhhhcc-chhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccC
Q 045242 93 LFYTGMKYTTATFTTAMAN-VLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYH 171 (243)
Q Consensus 93 ~~~~~l~~~~~~~a~~i~~-~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~ 171 (243)
+++.++++++.+.+..+.+ ++|++..+.+.+++||+.+.++ ...-+.|++++++|+.++...++. +.
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~~~~~---------~~- 142 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSRSKDK---------SA- 142 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEecccc---------cc-
Confidence 9999999999999988888 8889999999999999998761 011188899999998887411110 00
Q ss_pred cCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHH---HHHHHHHHHHHH
Q 045242 172 QESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSLT---ALICLMGTIEGT 230 (243)
Q Consensus 172 ~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~---~~~~~~~~~~~~ 230 (243)
++++..+...|.+++++++++|+.|.+..|+. +. |+...+ .+..+.++.+..
T Consensus 143 ----~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~ 197 (290)
T TIGR00776 143 ----GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFN 197 (290)
T ss_pred ----ccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHH
Confidence 00000233679999999999999999999975 35 467774 444444444333
No 18
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.48 E-value=1.6e-12 Score=109.14 Aligned_cols=133 Identities=19% Similarity=0.306 Sum_probs=114.3
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMSP--HVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLE 86 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~--~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 86 (243)
.+.+|..+.++++++|+.+.+..|... ++.++ .....+|+..+.+++.|+....++. ...+.+++......+.++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLV-KKEGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG 201 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHh-hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence 446799999999999999999999984 44664 4555578999999999887654332 234667788888899998
Q ss_pred HHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHH
Q 045242 87 PTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGA 150 (243)
Q Consensus 87 ~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv 150 (243)
+..++.++++++++.+++.++.+.++.|+++++++++++||+++..+ +.|..+.+.|+
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~ 259 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999997 99999999886
No 19
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.47 E-value=5.3e-12 Score=102.60 Aligned_cols=185 Identities=16% Similarity=0.137 Sum_probs=150.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 045242 13 PFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQN 92 (243)
Q Consensus 13 ~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (243)
++..++.+.+.-=...-+.|..+. ...+.-++.+|..+++++++++. |+.+.+.+++++......|... +..+.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP-~vG~~g~t~lRl~~aaLIll~l~----RPwr~r~~~~~~~~~~~yGvsL-g~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFP-LVGAAGVTALRLAIAALILLALF----RPWRRRLSKPQRLALLAYGVSL-GGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHcc-ccChhhHHHHHHHHHHHHHHHHh----hHHHhccChhhhHHHHHHHHHH-HHHHH
Confidence 577777777777777788888865 49999999999999999998753 2333467888899999999987 88899
Q ss_pred HHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCc
Q 045242 93 LFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQ 172 (243)
Q Consensus 93 ~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~ 172 (243)
+||.+++..|-+.+..+.++-|+..+.++. |+. + ....+.+++.|+.++. ..+
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s---Rr~---~------d~vwvaLAvlGi~lL~-p~~-------------- 139 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS---RRL---R------DFVWVALAVLGIWLLL-PLG-------------- 139 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhc---cch---h------hHHHHHHHHHHHHhhe-ecc--------------
Confidence 999999999999999999999998877754 111 2 2667778889999985 111
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHH
Q 045242 173 ESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIVALF 235 (243)
Q Consensus 173 ~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (243)
.+...-+..|..+++.++.||+.|.+..||..+..+ ...-+...+..++++.+|+...
T Consensus 140 ----~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~ 197 (292)
T COG5006 140 ----QSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAA 197 (292)
T ss_pred ----CCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhh
Confidence 123345789999999999999999999999887654 6788899999999999999864
No 20
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.43 E-value=3.4e-14 Score=116.10 Aligned_cols=207 Identities=15% Similarity=0.204 Sum_probs=149.3
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPT 88 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 88 (243)
+.++|..+..++ ..+....++.+..+ ..+|.+..-.|++.-.++..|..+.++..-..+...| .++++.|+.| .
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~--e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R--~~LiLRg~mG-~ 108 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVL--ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKR--KWLILRGFMG-F 108 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhh--ccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcE--EEEEeehhhh-h
Confidence 445677777777 55555555555552 3899999999977776666665444332211111222 3567788888 7
Q ss_pred HHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCC
Q 045242 89 IDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNH 168 (243)
Q Consensus 89 ~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~ 168 (243)
.+....||+++|.+.++|+++..+.|+++.+++|.++||+.++.+ ..+..+.+.|+++++ .+|...-. ++
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIv--RPpFlFG~--~t 178 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIV--RPPFLFGD--TT 178 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEe--cCCcccCC--Cc
Confidence 777888999999999999999999999999999999999999998 999999999999996 33333211 11
Q ss_pred ccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHh
Q 045242 169 NYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIVALFL 236 (243)
Q Consensus 169 ~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (243)
..+ +.+....+..|...++.+++.-|.-.++.|+++|+. |......|..+++.+..++.....
T Consensus 179 ~g~----~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~i 241 (346)
T KOG4510|consen 179 EGE----DSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASI 241 (346)
T ss_pred ccc----ccccccccCCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhc
Confidence 111 112234567788899999999999999999998987 455666677777777777665443
No 21
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.40 E-value=2.3e-11 Score=104.25 Aligned_cols=137 Identities=14% Similarity=0.093 Sum_probs=114.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 045242 10 RAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTI 89 (243)
Q Consensus 10 ~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 89 (243)
...|.++.+.++++|+.+.+..|.. .++.++.... +...++++++.|+...... ....++..+...+..|++++.+
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~-~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~ 221 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRA-GAEHGPATVA-IGSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTAL 221 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHH-hccCCchHHH-HHHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999999998 4567887765 4556677777776654332 1234556566677899999999
Q ss_pred HHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHH
Q 045242 90 DQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLI 156 (243)
Q Consensus 90 ~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~ 156 (243)
++.+|++++++.++++++.+.+++|+++.+++++++||+++..+ ++|.++.+.|++.....
T Consensus 222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999997 99999999999999643
No 22
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.39 E-value=1.8e-11 Score=104.86 Aligned_cols=137 Identities=16% Similarity=0.109 Sum_probs=117.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 045242 10 RAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTI 89 (243)
Q Consensus 10 ~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 89 (243)
+.+|.++.++++++|+.+.+..|.. .+ .++...+.+++.++++.+.++............+.+.+......+++++.+
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~ 225 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVWSSRL-PL-PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII 225 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhc-CC-CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 3569999999999999999999997 33 455677889999999988887654432221223567788999999999899
Q ss_pred HHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 90 DQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 90 ~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
++.+|++++++.++++++.+.+++|++++++++++++|+++..+ ++|.++.+.|+++..
T Consensus 226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997 999999999999986
No 23
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.31 E-value=1.5e-10 Score=101.67 Aligned_cols=138 Identities=9% Similarity=0.099 Sum_probs=108.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCh-HHHHHHHHHHHHHHHHHHHHHhhcCCC----CCCCHHHHHHHHHHHHH
Q 045242 11 AKPFLAVILLQFGYAGMSIFSKFALNKGMSP-HVFAVYRHAVATIVVAPFALILDRKVR----PKMTLSIFVKILLLGLL 85 (243)
Q Consensus 11 ~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~-~~~~~~r~~~~~i~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 85 (243)
..|.++++.++++|+.+.+..|.... ++++ ...+++....+++.+.+.....++... ...+.. ....+..++.
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~-~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~ 265 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMS-EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence 34889999999999999999998854 4654 466777877777776665555443211 112323 3335555655
Q ss_pred HHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHh
Q 045242 86 EPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIK 157 (243)
Q Consensus 86 ~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~ 157 (243)
..+++.+|++++++.+++.++...++.|++++++++++++|++++.+ ++|.++.+.|++++...+
T Consensus 266 -t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 266 -TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMWGK 330 (358)
T ss_pred -HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhhh
Confidence 47899999999999999999999999999999999999999999997 999999999999987433
No 24
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.28 E-value=6.1e-11 Score=101.41 Aligned_cols=112 Identities=19% Similarity=0.322 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhC
Q 045242 79 ILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKG 158 (243)
Q Consensus 79 ~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~ 158 (243)
.+..+.+- ..++..+..++.+++++..+++.++.-+|+..++.++.+||+++. |+++..+++.|+++++.+++
T Consensus 162 sl~fc~lW-F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s 234 (416)
T KOG2765|consen 162 SLFFCPLW-FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDS 234 (416)
T ss_pred HHHHHHHH-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEeccc
Confidence 33444444 889999999999999999999999999999999999999999999 59999999999999973322
Q ss_pred CccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 045242 159 PVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSY 211 (243)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~ 211 (243)
.| .++..+.+...|+++++++|+.||.|.++.||...+.
T Consensus 235 ------------~~--~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~e 273 (416)
T KOG2765|consen 235 ------------KQ--NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDE 273 (416)
T ss_pred ------------cc--cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 11 1123456678999999999999999999998876655
No 25
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.28 E-value=1.5e-10 Score=99.28 Aligned_cols=132 Identities=11% Similarity=0.131 Sum_probs=105.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 045242 11 AKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTID 90 (243)
Q Consensus 11 ~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 90 (243)
..|.+++++++++|+.+.+..|.. .++.++..... ..+++.+.+.....+ ......+.+.+......++ .+.++
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~-~~~~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~-~t~~~ 228 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKY-ARGKNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAA-AMGFG 228 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhc-cCCCCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHH-HHHHH
Confidence 458999999999999999999998 55678765432 333444444333322 2122356677777777775 56899
Q ss_pred HHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 91 QNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 91 ~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
+.+|++++++.++++++.+.+++|++++++++++++|+++..+ ++|.++++.|+.+..
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHh
Confidence 9999999999999999999999999999999999999999997 999999999998885
No 26
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.26 E-value=2.5e-11 Score=89.42 Aligned_cols=103 Identities=18% Similarity=0.382 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHH
Q 045242 46 VYRHAVATIVVAPFALILDRKV--RPKMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWI 123 (243)
Q Consensus 46 ~~r~~~~~i~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~ 123 (243)
.+|+..+.+++..+....++.+ .+..+++.+.+....|.++...++.++++|+++.+ +.++.+.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5799999999888776643321 12234455667777788886799999999999999 58889999999999999999
Q ss_pred HhhccccccccccccchhHHHHHHHHHHHHHH
Q 045242 124 IRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTL 155 (243)
Q Consensus 124 ~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 155 (243)
++|||+++++ +.++.++++|+.++..
T Consensus 81 ~~~er~~~~~------~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 81 FFKERLSPRR------WLAILLILIGVILIAW 106 (113)
T ss_pred HhcCCCCHHH------HHHHHHHHHHHHHHhh
Confidence 9999999996 9999999999999973
No 27
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.21 E-value=9.5e-10 Score=94.51 Aligned_cols=137 Identities=14% Similarity=0.227 Sum_probs=108.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCh---HHHHHHHHHHHHHHHHHHHHHhhcCC-----CCCCCHHHHHHHHHH
Q 045242 11 AKPFLAVILLQFGYAGMSIFSKFALNKGMSP---HVFAVYRHAVATIVVAPFALILDRKV-----RPKMTLSIFVKILLL 82 (243)
Q Consensus 11 ~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~---~~~~~~r~~~~~i~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 82 (243)
..|.++.++++++|+.+.+..|... +..++ .....+....+.+.+.......+... ....+.+.+..++..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIM-SHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 4699999999999999999999873 32332 33344455554444433333332211 123567789999999
Q ss_pred HHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 83 GLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 83 g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
|++++.+++.+|+.++++.++++++.+.+++|+++.++++++++|+++..+ ++|.++.++|+.+..
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999997 999999999998875
No 28
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.18 E-value=8.2e-09 Score=88.89 Aligned_cols=188 Identities=16% Similarity=0.131 Sum_probs=142.4
Q ss_pred HHHHHHHHHHhC-CCC--hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 045242 26 GMSIFSKFALNK-GMS--PHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTT 102 (243)
Q Consensus 26 ~~~~~~k~~~~~-~~~--~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~ 102 (243)
.+.+.......+ ... |..+++.++....++..+.....++++ .++..+..+...+++. .++..+-+.++++.+
T Consensus 14 ~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~ 89 (303)
T PF08449_consen 14 SYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK---SRKIPLKKYAILSFLF-FLASVLSNAALKYIS 89 (303)
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC---CCcChHHHHHHHHHHH-HHHHHHHHHHHHhCC
Confidence 344555554432 234 889999999999888777554433122 2223355666777776 888999999999999
Q ss_pred hhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCc
Q 045242 103 ATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQS 182 (243)
Q Consensus 103 ~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (243)
...-.++-+..|+.+++++.+++|+|.+.++ +.++++..+|+.+..+.+.... ..++....+
T Consensus 90 ~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~------------~~~~~~~~~ 151 (303)
T PF08449_consen 90 YPTQIVFKSSKPIPVMILGVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSS------------SSSNSSSFS 151 (303)
T ss_pred hHHHHHHhhhHHHHHHHHHHHhcCccccHHH------HHHHHHHHhhHheeeecccccc------------ccccccccc
Confidence 9999999999999999999999999999996 9999999999999974432110 001112222
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHH
Q 045242 183 PIKGALMITIGCFSWAGFMVLQAITLKSYP-TELSLTALICLMGTIEGTIVALF 235 (243)
Q Consensus 183 ~~~G~~~~llaal~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (243)
...|+++.+++.++-+...+++++..++++ ++...+++...++.+...+....
T Consensus 152 ~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~ 205 (303)
T PF08449_consen 152 SALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFL 205 (303)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 344999999999999999999999988765 57899999999999988887776
No 29
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.15 E-value=3e-10 Score=96.76 Aligned_cols=134 Identities=16% Similarity=0.076 Sum_probs=96.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCChH----HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 045242 11 AKPFLAVILLQFGYAGMSIFSKFALNKGMSPH----VFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLE 86 (243)
Q Consensus 11 ~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~----~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 86 (243)
.++..+.++++++|+.+.+..|.. .++.++. ....+.+...++.+.+.....+++. .......+......+.+.
T Consensus 143 ~~g~~~~l~aal~~a~~~i~~k~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 220 (281)
T TIGR03340 143 RKAYAWALAAALGTAIYSLSDKAA-ALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS-MFPYARQILPSATLGGLM 220 (281)
T ss_pred hhHHHHHHHHHHHHHHhhhhcccc-ccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc-hhhhHHHHHHHHHHHHHH
Confidence 457778999999999999998876 3334433 2333333333222222221112111 111223355667777777
Q ss_pred HHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHH
Q 045242 87 PTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMF 152 (243)
Q Consensus 87 ~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 152 (243)
..+++.+|++++++.+++.++.+.+++|+++.+++++++||+++..+ ++|..+.++|+.+
T Consensus 221 s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~------~iG~~lil~Gv~l 280 (281)
T TIGR03340 221 IGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTR------LMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHhHHh
Confidence 78999999999999999999999999999999999999999999997 9999999999876
No 30
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.10 E-value=9.7e-10 Score=94.53 Aligned_cols=140 Identities=14% Similarity=0.186 Sum_probs=108.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCC---------CCHHHHHH-
Q 045242 10 RAKPFLAVILLQFGYAGMSIFSKFALNK-GMSPHVFAVYRHAVATIVVAPFALILDRKVRPK---------MTLSIFVK- 78 (243)
Q Consensus 10 ~~~~~~~~~~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~---------~~~~~~~~- 78 (243)
+..|.++++++++.|+.+.+..|...++ ++||..+..+....+++.+.|+....+...... ........
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 3569999999999999999999998431 599999999999999999999876544211100 01011111
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHH
Q 045242 79 ILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTL 155 (243)
Q Consensus 79 ~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 155 (243)
.+..+.......+.+++.++++++++++++...+.|++++++++++++|+++..+ +.|.++++.|+.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHH
Confidence 2223332333444677789999999999999999999999999999999999997 9999999999999863
No 31
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.02 E-value=1.9e-09 Score=92.30 Aligned_cols=185 Identities=14% Similarity=0.159 Sum_probs=147.5
Q ss_pred HHHHHHHHHHh--CCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCh
Q 045242 26 GMSIFSKFALN--KGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTTA 103 (243)
Q Consensus 26 ~~~~~~k~~~~--~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~ 103 (243)
......|..++ +.--|..++..+...+.+.+...-.....+..+..++..+...+.+|++. +++..+-+.++++.++
T Consensus 31 ~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~V 109 (316)
T KOG1441|consen 31 GVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPV 109 (316)
T ss_pred eeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccch
Confidence 44456677766 33458889999888877777655443333322222445577888888887 9999999999999999
Q ss_pred hhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcc
Q 045242 104 TFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSP 183 (243)
Q Consensus 104 ~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (243)
+....+-.++|++++++++++.+|+.+... ...++....|+.+.+. .+...+
T Consensus 110 sF~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~----------------------~e~~fn 161 (316)
T KOG1441|consen 110 SFYQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASV----------------------TELSFN 161 (316)
T ss_pred hHHHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeee----------------------cccccc
Confidence 999999999999999999999999999996 8888888888888862 233456
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh--cCC-chhHHHHHHHHHHHHHHH-HHHHHhccC
Q 045242 184 IKGALMITIGCFSWAGFMVLQAITLK--SYP-TELSLTALICLMGTIEGT-IVALFLERG 239 (243)
Q Consensus 184 ~~G~~~~llaal~~a~~~v~~k~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 239 (243)
..|...++.+.+..+..+++.|+..+ +.+ |++....++.-++.+.++ |+....|++
T Consensus 162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~ 221 (316)
T KOG1441|consen 162 LFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGN 221 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhccc
Confidence 89999999999999999999999884 333 789999999999999999 887776653
No 32
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.93 E-value=5e-08 Score=85.69 Aligned_cols=138 Identities=16% Similarity=0.198 Sum_probs=103.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhcCCCC--------CCCHHH
Q 045242 10 RAKPFLAVILLQFGYAGMSIFSKFALNK------GMSPHVFAVYRHAVATIVVAPFALILDRKVRP--------KMTLSI 75 (243)
Q Consensus 10 ~~~~~~~~~~a~~~~a~~~~~~k~~~~~------~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~--------~~~~~~ 75 (243)
+..|.++++++++.|+...+..|..+++ +.++.....+....++++++|+....+..... ..+...
T Consensus 192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~ 271 (350)
T PTZ00343 192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT 271 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence 4569999999999999999999998643 25677777778899999999987644321100 011101
Q ss_pred HHHHHHHHHHHHHHHHHHHH----HhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHH
Q 045242 76 FVKILLLGLLEPTIDQNLFY----TGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAM 151 (243)
Q Consensus 76 ~~~~~~~g~~~~~~~~~~~~----~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 151 (243)
+..... .++..++.+.+++ ++++++++.+.++...+.|++++++++++++|+++..+ ++|.++++.|++
T Consensus 272 ~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~------~iG~~lii~Gv~ 344 (350)
T PTZ00343 272 KGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG------YLGMAVAILGAL 344 (350)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh------HHHHHHHHHHHH
Confidence 111111 2222244444444 69999999999999999999999999999999999997 999999999998
Q ss_pred HHH
Q 045242 152 FMT 154 (243)
Q Consensus 152 l~~ 154 (243)
+..
T Consensus 345 lYs 347 (350)
T PTZ00343 345 LYS 347 (350)
T ss_pred HHh
Confidence 864
No 33
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.92 E-value=2.6e-08 Score=85.28 Aligned_cols=130 Identities=15% Similarity=0.173 Sum_probs=103.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH---HHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Q 045242 10 RAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHA---VATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLE 86 (243)
Q Consensus 10 ~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~---~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 86 (243)
..||+++.+++++.++.+.+..|.. ++||.+..+.+.. +++.++.+.. + +.++ ...+..+.....|++
T Consensus 150 ~~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~--~--~~~~-~~~~~~~~~~~~Gi~- 220 (290)
T TIGR00776 150 FKKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH--I--LAKP-LKKYAILLNILPGLM- 220 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH--h--cccc-hHHHHHHHHHHHHHH-
Confidence 3679999999999999999999986 3899988666555 3333333322 1 1112 233445556668888
Q ss_pred HHHHHHHHHHhhc-ccChhhhhhhccchhHHHHHHHHHHhhccccccccccccch----hHHHHHHHHHHHHH
Q 045242 87 PTIDQNLFYTGMK-YTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKV----FGTIVTVGGAMFMT 154 (243)
Q Consensus 87 ~~~~~~~~~~~l~-~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~----~g~~l~~~Gv~l~~ 154 (243)
...++.+|+.+.+ +.+++.++.+.+..|+.+.+.+++++||+.+++| + +|.++.+.|+.++.
T Consensus 221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHh
Confidence 4999999999999 9999999999999999999999999999999997 8 99999999998875
No 34
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=98.91 E-value=6.4e-08 Score=80.70 Aligned_cols=152 Identities=16% Similarity=0.207 Sum_probs=114.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHH
Q 045242 72 TLSIFVKILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAM 151 (243)
Q Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 151 (243)
++++.+++.+-+++. .+.+.+.+.++++.+++.-.++..+-.+++++++++++|+|++.+| |.++++..+|+.
T Consensus 13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHh
Confidence 556777888888885 9999999999999999999999999999999999999999999997 999999999999
Q ss_pred HHHHHhCCccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHH
Q 045242 152 FMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYP-TELSLTALICLMGTIEGT 230 (243)
Q Consensus 152 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~ 230 (243)
++-..+.... +++.....+.+....+...|.++.++++++-++..++..|.+|+.+ +...........|.++.+
T Consensus 86 lv~~~~~~~~-----~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~ 160 (244)
T PF04142_consen 86 LVQLSSSQSS-----DNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNL 160 (244)
T ss_pred eeecCCcccc-----ccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHH
Confidence 9852221100 0000000001122455789999999999999999999999998864 344445555566666666
Q ss_pred HHHHH
Q 045242 231 IVALF 235 (243)
Q Consensus 231 ~~~~~ 235 (243)
+...+
T Consensus 161 ~~~~~ 165 (244)
T PF04142_consen 161 LALLL 165 (244)
T ss_pred HHHhc
Confidence 55444
No 35
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.90 E-value=9.2e-08 Score=80.86 Aligned_cols=134 Identities=16% Similarity=0.260 Sum_probs=109.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH-HHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 045242 10 RAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAV-YRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPT 88 (243)
Q Consensus 10 ~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~-~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 88 (243)
...|..+.+.+++.|+.+.+..|... ..++..... +.+........+.. ..... .....+.+......|+++..
T Consensus 152 ~~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~g~~~~~ 226 (292)
T COG0697 152 SLLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFF--LSGFG-APILSRAWLLLLYLGVFSTG 226 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHH--hcccc-ccCCHHHHHHHHHHHHHHHH
Confidence 35799999999999999999999884 477777777 55553333333322 22121 34566778899999999977
Q ss_pred HHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 89 IDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 89 ~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
.++.+++++++..+++.++.+.++.|+++.++++++++|+++..+ +.|..+.+.|+.+..
T Consensus 227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~ 286 (292)
T COG0697 227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999997 999999999999885
No 36
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.89 E-value=5.6e-08 Score=83.42 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 045242 15 LAVILLQFGYAGMSIFSKFALNKG-MSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNL 93 (243)
Q Consensus 15 ~~~~~a~~~~a~~~~~~k~~~~~~-~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 93 (243)
...+.++++|+.+.+..|....+. .++.....+....+.+...+.... ............+......|+. ..+++.+
T Consensus 152 ~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~-t~i~~~~ 229 (296)
T PRK15430 152 IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADS-STSHMGQNPMSLNLLLIAAGIV-TTVPLLC 229 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHccC-CcccccCCcHHHHHHHHHHHHH-HHHHHHH
Confidence 457788999999999998873211 223344444454544443322110 0000111122223344444554 5799999
Q ss_pred HHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 94 FYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 94 ~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
|++++++.+++.++.+.++.|+++.++++++++|++++.+ +.|..+.+.|+.++.
T Consensus 230 ~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~------~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 230 FTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADK------MVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997 999999999988885
No 37
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.87 E-value=9.9e-08 Score=73.57 Aligned_cols=133 Identities=18% Similarity=0.279 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCC----C-------CHHH
Q 045242 13 PFLAVILLQFGYAGMSIFSKFALNK------GMSPHVFAVYRHAVATIVVAPFALILDRKVRPK----M-------TLSI 75 (243)
Q Consensus 13 ~~~~~~~a~~~~a~~~~~~k~~~~~------~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~----~-------~~~~ 75 (243)
|.++++.+.+..+...+..|..+++ +.++.++..+-...+.+++.|.....++.+..+ . ..+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5678899999999999999998866 689999999999999999999887776544110 0 2244
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHH
Q 045242 76 FVKILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMF 152 (243)
Q Consensus 76 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 152 (243)
+..++..|++. ...+...+..++++++...++....-.+.+.++++++++|+++..+ +.|.++++.|..+
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence 55556666666 8899999999999999999999999999999999999999999997 9999999999875
No 38
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.75 E-value=4.8e-10 Score=91.45 Aligned_cols=197 Identities=15% Similarity=0.238 Sum_probs=145.2
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMS-PHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEP 87 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 87 (243)
+-..+..+.-+-+++-..........-+++.+ |..-++.-+..-+++..|+..+++ +..+ ..|.+.++++++.
T Consensus 15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~~~~---~~~~hYilla~~D- 88 (336)
T KOG2766|consen 15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR--KYIK---AKWRHYILLAFVD- 88 (336)
T ss_pred hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh--HHHH---HHHHHhhheeEEe-
Confidence 33445555544445544444444443245454 666777777777788888766533 2122 2255688888887
Q ss_pred HHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCC
Q 045242 88 TIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTN 167 (243)
Q Consensus 88 ~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~ 167 (243)
.=++.+...+.||++-+.+..+-.-.-+...+++|++++.|..+.+ +.|.++|+.|+.++++++- +
T Consensus 89 VEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV--~------ 154 (336)
T KOG2766|consen 89 VEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDV--H------ 154 (336)
T ss_pred ecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeee--c------
Confidence 6677778899999999999998887777778999999999999996 9999999999999963221 0
Q ss_pred CccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 045242 168 HNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIV 232 (243)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (243)
+.+...+.+...|+.+.+++|-+||..++....+.|+. |....+....++|+++..+=
T Consensus 155 ------agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ 212 (336)
T KOG2766|consen 155 ------AGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQ 212 (336)
T ss_pred ------cccccCCCCCccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHH
Confidence 00123456678999999999999999999999988988 58888889999999988876
No 39
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.70 E-value=3.8e-07 Score=74.65 Aligned_cols=136 Identities=13% Similarity=0.081 Sum_probs=118.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 045242 10 RAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTI 89 (243)
Q Consensus 10 ~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 89 (243)
+..|..+.+.+..+|+.+.+..|.+ .+..+...-+..-+.+++++.+|+-....... ..+++.....+..++++..+
T Consensus 146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~-g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSal 222 (292)
T COG5006 146 DPVGVALALGAGACWALYIVLGQRA-GRAEHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSAL 222 (292)
T ss_pred CHHHHHHHHHHhHHHHHHHHHcchh-cccCCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhccc
Confidence 4468999999999999999999998 54577777888899999999999876544332 35667777888899999999
Q ss_pred HHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 90 DQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 90 ~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
.|.+...++++.|...-+++.++.|.+.++.++++++|.+++.| |.++...+.+..-.+
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~ 281 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGST 281 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999997 999998888776554
No 40
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=98.67 E-value=2.6e-05 Score=67.06 Aligned_cols=204 Identities=15% Similarity=0.199 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHHHhhcC----CCCC------CCHHHHHH
Q 045242 12 KPFLAVILLQFGYAGMSIFSKFALNKG---MSPHVFAVYRHAVATIVVAPFALILDRK----VRPK------MTLSIFVK 78 (243)
Q Consensus 12 ~~~~~~~~a~~~~a~~~~~~k~~~~~~---~~~~~~~~~r~~~~~i~l~~~~~~~~~~----~~~~------~~~~~~~~ 78 (243)
.-++.+++..+-++......|+.-..+ +.|....+.--++-.++.....+...|+ ..+. ..+++.++
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 445556666778899999999884334 6788888887777777776666555322 1111 23345666
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhC
Q 045242 79 ILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKG 158 (243)
Q Consensus 79 ~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~ 158 (243)
..+-+++. ++.+-++|.++.+.+++.-.+...+--+.|+++..+++++|+++.| |.+.++...|+.++-....
T Consensus 95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCC
Confidence 66667775 7777799999999999999999999999999999999999999997 9999999999999842221
Q ss_pred CccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHH-HHHHHHHHHHH
Q 045242 159 PVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSLTALIC-LMGTIEGTIVA 233 (243)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 233 (243)
+ +.++.+.....+...|....+.+++.=++..++..|++|+-..+..+...++ .+|.++.+...
T Consensus 168 ~-----------~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~ 232 (345)
T KOG2234|consen 168 S-----------PTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTI 232 (345)
T ss_pred C-----------CCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111112345667899999999999999999999999987433444444444 44444444443
No 41
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.58 E-value=1.1e-05 Score=68.47 Aligned_cols=196 Identities=13% Similarity=0.118 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH--HHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 045242 13 PFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAV--YRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTID 90 (243)
Q Consensus 13 ~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~--~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 90 (243)
+....+.=++.-..+.+..|.++.+.--|..+.. .|.+...+.+...-.. +--+.++++++..++.+-..++. .+.
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~~~l~~~~~kk~~P~~~lf-~~~ 90 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNFRPLDLRTAKKWFPVSLLF-VGM 90 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeecCCcChHHHHHHccHHHHH-HHH
Confidence 3444444444445667777888765323444444 8888877776643221 11234567788888888888876 777
Q ss_pred HHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCcc
Q 045242 91 QNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNY 170 (243)
Q Consensus 91 ~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~ 170 (243)
...=..++++.++..-+++-...|+++++.+.+++|.+++.+- +.+.....+|......
T Consensus 91 i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~--------------- 149 (314)
T KOG1444|consen 91 LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAF--------------- 149 (314)
T ss_pred HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhcc---------------
Confidence 7777889999999999999999999999999999997777664 8888887777777651
Q ss_pred CcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHHhcc
Q 045242 171 HQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYP-TELSLTALICLMGTIEGTIVALFLER 238 (243)
Q Consensus 171 ~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (243)
.+...+..|..|++...++-+.+.+..|+..+... +....++|..+.+...+....+++++
T Consensus 150 -------~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge 211 (314)
T KOG1444|consen 150 -------TDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGE 211 (314)
T ss_pred -------ccceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcc
Confidence 11223345999999999999999999998776543 46778888888888888888866654
No 42
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.56 E-value=1.6e-06 Score=75.26 Aligned_cols=144 Identities=15% Similarity=0.059 Sum_probs=113.6
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCC--CCHHHHHHHHHHHHH
Q 045242 8 YIRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPK--MTLSIFVKILLLGLL 85 (243)
Q Consensus 8 ~~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~ 85 (243)
.+..+|-++++.+++++|.+.+..+... ++.|+.++..+-.+.+.++..+.....+++.... ++++....+...++
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v-~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~- 241 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLV-KKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYAL- 241 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHH-
Confidence 3567899999999999999999999985 4589999999888999998888777776655433 34444443333333
Q ss_pred HHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCC
Q 045242 86 EPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGP 159 (243)
Q Consensus 86 ~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~ 159 (243)
.....+.+.-..++.++++...+=.-+..+++++.+.+++|+++++.. ++|.++.++|.++....+++
T Consensus 242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEccCCc
Confidence 335666677788889999887776678899999999999999999986 99999999999998654443
No 43
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.56 E-value=5e-07 Score=66.19 Aligned_cols=71 Identities=18% Similarity=0.154 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 78 KILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 78 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
.....++++++..+.++..++++.|.+.+..+.++.|+++.+++++++|||+++++ ++|+.+++.|++++.
T Consensus 38 ~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 38 LWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence 34445557778999999999999999999998889999999999999999999996 999999999999885
No 44
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=98.46 E-value=7.9e-06 Score=68.77 Aligned_cols=169 Identities=19% Similarity=0.216 Sum_probs=119.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCHHHHHHHH-HHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHH
Q 045242 41 PHVFAVYRHAVATIVVAPFALILDRKV---RPKMTLSIFVKIL-LLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAF 116 (243)
Q Consensus 41 ~~~~~~~r~~~~~i~l~~~~~~~~~~~---~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~ 116 (243)
|..++..+..+-..+.......++++. +...+|++.++-+ -.|+.+ ++.-.+-+.+++|++.+.-+..-+..++|
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F 123 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF 123 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence 788888877765555443322232222 2356777655444 445554 89999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHH
Q 045242 117 AFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFS 196 (243)
Q Consensus 117 ~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~ 196 (243)
..+.+..+.-||++|.- ..-+.+..+|+.+.+ .+ +.+-+..|..+.+++.++
T Consensus 124 IllFs~if~lEk~~w~L------~l~v~lI~~Glflft-~K---------------------sTqf~i~Gf~lv~~aS~~ 175 (349)
T KOG1443|consen 124 ILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFT-YK---------------------STQFNIEGFFLVLAASLL 175 (349)
T ss_pred HHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEE-ec---------------------ccceeehhHHHHHHHHHh
Confidence 99999999999999984 555666666666665 22 234456788887777776
Q ss_pred HHHHHHHHHHHHhcCC----chhHHHHHHHHHHHHHHHHHHHHhcc
Q 045242 197 WAGFMVLQAITLKSYP----TELSLTALICLMGTIEGTIVALFLER 238 (243)
Q Consensus 197 ~a~~~v~~k~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (243)
-++--.+.++.+++.| +|........-...+.++|..+.+|+
T Consensus 176 sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG 221 (349)
T KOG1443|consen 176 SGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEG 221 (349)
T ss_pred hhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcc
Confidence 6665555555555532 67888888777888888888888887
No 45
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.40 E-value=8e-06 Score=61.36 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 045242 12 KPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQ 91 (243)
Q Consensus 12 ~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 91 (243)
.++++++++.++-+..-++.|..+++ .+....... . . ..... . .+ ....+..|+..+.+++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~------~~~~~-~------~~---p~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-I------AALLA-F------GL---ALRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-H------HHHHH-H------hc---cHHHHHHHHHHHHHHH
Confidence 36788888888888999999998644 433222111 1 0 00000 0 01 1235778888899999
Q ss_pred HHHHHhhcccChhhhhhhccchhHHHHHHHHH--HhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 92 NLFYTGMKYTTATFTTAMANVLPAFAFLMAWI--IRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 92 ~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~--~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
.+|.+++++.|++.+..+.+..+.++.+.++. ++||++++.+ ++|+++.++|++++.
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhc
Confidence 99999999999999999989888888888885 8999999996 999999999999985
No 46
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=98.26 E-value=8.1e-05 Score=62.12 Aligned_cols=196 Identities=20% Similarity=0.195 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHHHh---CCC----ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-------------CCHHHHHHH
Q 045242 20 LQFGYAGMSIFSKFALN---KGM----SPHVFAVYRHAVATIVVAPFALILDRKVRPK-------------MTLSIFVKI 79 (243)
Q Consensus 20 a~~~~a~~~~~~k~~~~---~~~----~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~-------------~~~~~~~~~ 79 (243)
-.+.-+.+.+++|++-+ ++- +|...+..-|+--+.++..+.+++.|.+.+. .+.+ ....
T Consensus 11 mvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lf 89 (372)
T KOG3912|consen 11 MVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLF 89 (372)
T ss_pred hhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-ccee
Confidence 33445678888888731 122 3555555555555566666665554432110 0111 1222
Q ss_pred HHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCC
Q 045242 80 LLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGP 159 (243)
Q Consensus 80 ~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~ 159 (243)
+.-+++. ..+..+.|.|+.+++++.-..+-...-+|+.+++.-+++++++.+| |.|+....+|+.++...+
T Consensus 90 l~Pal~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d-- 160 (372)
T KOG3912|consen 90 LPPALCD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLD-- 160 (372)
T ss_pred cChHHHH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeee--
Confidence 3345555 7788889999999999999999999999999999999999999997 999999999999885211
Q ss_pred ccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHH
Q 045242 160 VLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYP-TELSLTALICLMGTIEGTIVALF 235 (243)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (243)
.. ..++ +..+..+...|+.+.+.|-+.-|...+.-.|..++.. +|.....|+.++|.+.+..++..
T Consensus 161 ~~----~~~~------p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~ 227 (372)
T KOG3912|consen 161 VH----LVTD------PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIP 227 (372)
T ss_pred cc----cccC------CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHH
Confidence 00 0001 1223456789999999999999999999988887753 68999999999997776665544
No 47
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.08 E-value=0.001 Score=58.03 Aligned_cols=178 Identities=13% Similarity=0.072 Sum_probs=114.9
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHH--HHHhhc---CCCCCCCHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPF--ALILDR---KVRPKMTLSIFVKILLLG 83 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~--~~~~~~---~~~~~~~~~~~~~~~~~g 83 (243)
+-..|++.++++.++||..++..|.. + ..+-..+-....+++ -++.|+ .....+ ......+.+.+...++.|
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~~-k-~w~wE~~W~v~gi~~-wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G 80 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKKV-K-KWSWETMWSVGGIFS-WLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG 80 (345)
T ss_pred hhHHHHHHHHHHHHHhhccccccccc-C-CCchhHHHHHHHHHH-HHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence 45679999999999999999999995 3 344222111111111 111221 111111 112235667677777777
Q ss_pred HHHHHHHHHHHHHhhcccChhhhhhhc-cchhHHHHHHHHHHhhccc---cccccccccchhHHHHHHHHHHHHHHHhCC
Q 045242 84 LLEPTIDQNLFYTGMKYTTATFTTAMA-NVLPAFAFLMAWIIRLEKV---NFRKFHSWAKVFGTIVTVGGAMFMTLIKGP 159 (243)
Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~a~~i~-~~~Pi~~~il~~~~~~e~~---~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~ 159 (243)
++- ..++..++.++++.+.+.+..+. .++-+...++..++++|=. +-.+ -..-..|++++++|+.+......-
T Consensus 81 ~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~~ 157 (345)
T PRK13499 81 ALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQL 157 (345)
T ss_pred HHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhhh
Confidence 776 99999999999999999987655 5888999999998988633 2111 112478888999999998742110
Q ss_pred ccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q 045242 160 VLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFM 201 (243)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~ 201 (243)
.+ .+.. ++...+.+...|.+.++++.+.+++|.
T Consensus 158 -k~-----~~~~---~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 158 -KE-----RKMG---IKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred -cc-----cccc---cccccccchHhHHHHHHHHHHHHHHHH
Confidence 00 0000 000224567899999999999999999
No 48
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.07 E-value=0.00031 Score=59.06 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhcc-chhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHH
Q 045242 73 LSIFVKILLLGLLEPTIDQNLFYTGMKYTTATFTTAMAN-VLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAM 151 (243)
Q Consensus 73 ~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~-~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 151 (243)
.+.+...++.|++- .+++...+.+.++.+++++..+.. ++-+.+.+.+.++++|--+..+ --.-..++++.++|++
T Consensus 42 ~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~--~~~G~~Al~liiiGv~ 118 (269)
T PF06800_consen 42 GTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQ--KIIGFLALVLIIIGVI 118 (269)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcch--HHHHHHHHHHHHHHHH
Confidence 36677778888886 999999999999999999998775 6677799999999999777664 0011346677778887
Q ss_pred HHHHHhCCccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 045242 152 FMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAI 206 (243)
Q Consensus 152 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~ 206 (243)
+....++. ++..++..+...|....+++.+.|..|.+..|.
T Consensus 119 lts~~~~~--------------~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~ 159 (269)
T PF06800_consen 119 LTSYQDKK--------------SDKSSSKSNMKKGILALLISTIGYWIYSVIPKA 159 (269)
T ss_pred Hhcccccc--------------ccccccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 77632221 001122445678999999999999999999776
No 49
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.06 E-value=5.4e-05 Score=63.57 Aligned_cols=118 Identities=18% Similarity=0.093 Sum_probs=89.1
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Q 045242 8 YIRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEP 87 (243)
Q Consensus 8 ~~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 87 (243)
.+..|++..++++.+.+..+..+.|.. +.|+.+..+-+.+--.+.-..+.... ++ +...+..++-...|++-
T Consensus 134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~~---~~~~k~~~~nil~G~~w- 205 (269)
T PF06800_consen 134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-KK---PFFEKKSWKNILTGLIW- 205 (269)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-cc---cccccchHHhhHHHHHH-
Confidence 355789999999999999999998886 48888887766443333333322222 11 12223344556667775
Q ss_pred HHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccc
Q 045242 88 TIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRK 133 (243)
Q Consensus 88 ~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~ 133 (243)
..++.+++.+.+..+.+.+-.+..+.++++.+-+.+++||+-++++
T Consensus 206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke 251 (269)
T PF06800_consen 206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE 251 (269)
T ss_pred HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh
Confidence 8999999999999999999999999999999999999999988775
No 50
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.96 E-value=0.0002 Score=61.71 Aligned_cols=136 Identities=15% Similarity=0.188 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhh--cCC----CCCCCHHHHHHHHHHHHH
Q 045242 13 PFLAVILLQFGYAGMSIFSKFALN-KGMSPHVFAVYRHAVATIVVAPFALILD--RKV----RPKMTLSIFVKILLLGLL 85 (243)
Q Consensus 13 ~~~~~~~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~r~~~~~i~l~~~~~~~~--~~~----~~~~~~~~~~~~~~~g~~ 85 (243)
|+++++++.++-|...+..+..++ .+.++.+..++-...+.++..+...... .-. .....+..+..++..++.
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999998874 3688999999999999998887766521 110 001122345555666666
Q ss_pred HHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHH
Q 045242 86 EPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTL 155 (243)
Q Consensus 86 ~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 155 (243)
+ ..++.+.+...++.++...+++..+--+++.+++.+++++++++.+ |.|+++.+.|..+-..
T Consensus 235 ~-~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~------~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 235 G-ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQ------WIGIVLVFAGIFLYSY 297 (303)
T ss_pred H-HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHH------HHHHHHhHHHHHHHHH
Confidence 6 7788888888999999999999999999999999999999999997 9999999999998863
No 51
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.92 E-value=0.00029 Score=59.00 Aligned_cols=106 Identities=13% Similarity=0.192 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-CCHHHHHHHHHHHHHHHHHHHHH
Q 045242 15 LAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPK-MTLSIFVKILLLGLLEPTIDQNL 93 (243)
Q Consensus 15 ~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~ 93 (243)
...+.++++|+.+.+..|.. .+ .++......... ...+..+............ ...++|...+..|++ +.+++.+
T Consensus 149 ~~~l~aa~~~a~~~i~~~~~-~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l 224 (256)
T TIGR00688 149 WEALVLAFSFTAYGLIRKAL-KN-TDLAGFCLETLS-LMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGLI-TGTPLLA 224 (256)
T ss_pred HHHHHHHHHHHHHHHHHhhc-CC-CCcchHHHHHHH-HHHHHHHHHHHhccCcccccCchhHHHHHHHHHHH-HHHHHHH
Confidence 35678899999999999987 33 333332222211 1112221111111111111 123478888888887 5899999
Q ss_pred HHHhhcccChhhhhhhccchhHHHHHHHHHH
Q 045242 94 FYTGMKYTTATFTTAMANVLPAFAFLMAWII 124 (243)
Q Consensus 94 ~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~ 124 (243)
+++++++.+++.++.+.+++|+++.+++.+.
T Consensus 225 ~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 225 FVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998754
No 52
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=97.84 E-value=3.9e-05 Score=60.87 Aligned_cols=98 Identities=20% Similarity=0.258 Sum_probs=85.9
Q ss_pred HHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCC
Q 045242 88 TIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTN 167 (243)
Q Consensus 88 ~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~ 167 (243)
+..++.|..+++..++++++.++...--++.+++++.++||+.-.+ +.+.++++.|++++...+
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~D---------- 127 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYAD---------- 127 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEecc----------
Confidence 6778899999999999999999999999999999999999999885 999999999999885211
Q ss_pred CccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 045242 168 HNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSY 211 (243)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~ 211 (243)
+.......|..++..++..-|.|-++-|+...+.
T Consensus 128 ----------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnA 161 (290)
T KOG4314|consen 128 ----------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNA 161 (290)
T ss_pred ----------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 1234457899999999999999999999988764
No 53
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.74 E-value=0.0023 Score=53.92 Aligned_cols=127 Identities=14% Similarity=0.147 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 045242 18 ILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKV--RPKMTLSIFVKILLLGLLEPTIDQNLFY 95 (243)
Q Consensus 18 ~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 95 (243)
+.-++.|+.++..-|.. ++|+.+=...-...-.+..+...+...... ...-+.+.+..+...|.+. ++...++.
T Consensus 154 l~la~sf~~Ygl~RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vT-avpL~lf~ 229 (293)
T COG2962 154 LALALSFGLYGLLRKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVT-AVPLLLFA 229 (293)
T ss_pred HHHHHHHHHHHHHHHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHH-HHHHHHHH
Confidence 44567788888888877 478777776666665555554444433222 1113556677888888886 99999999
Q ss_pred HhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 96 TGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 96 ~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
.|-+++|-+...++.|..|....+++.++++|+++..+ ..+-+..-+|..+..
T Consensus 230 ~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~------~~~F~~IW~aL~l~~ 282 (293)
T COG2962 230 AAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQ------LVTFAFIWLALALFS 282 (293)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999996 999999888888886
No 54
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.66 E-value=0.0003 Score=58.61 Aligned_cols=172 Identities=13% Similarity=0.113 Sum_probs=117.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcCC----CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhccch
Q 045242 40 SPHVFAVYRHAVATIVVAPFALILDRKV----RP--KMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVL 113 (243)
Q Consensus 40 ~~~~~~~~r~~~~~i~l~~~~~~~~~~~----~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~ 113 (243)
.|..++.++.++...+.+.+.....+-. .+ +++.+......-+.++- .+...+-.++++|.+++---+=-++.
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL~yVgVaFYyvgRsLt 138 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCLKYVGVAFYYVGRSLT 138 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceehhhcceEEEEeccchh
Confidence 5889999999998877776554432211 11 23334344444444443 44455567888888887766666788
Q ss_pred hHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHH
Q 045242 114 PAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIG 193 (243)
Q Consensus 114 Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~lla 193 (243)
-+|+++++++++|+|-+... ..+..+.+.|-.+=+ .++ +..+.-...|.+++..|
T Consensus 139 tvFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGv-dqE------------------~~~~~ls~~GvifGVla 193 (347)
T KOG1442|consen 139 TVFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGV-DQE------------------GSTGTLSWIGVIFGVLA 193 (347)
T ss_pred hhHHHHhHHhhccccccccc------ceeehhheehheecc-ccc------------------cccCccchhhhHHHHHH
Confidence 89999999999999999874 555555444443332 111 12234467899999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHHhc
Q 045242 194 CFSWAGFMVLQAITLKSYP-TELSLTALICLMGTIEGTIVALFLE 237 (243)
Q Consensus 194 al~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (243)
.++-|+..+..||...... .-...++|..+.+.+.++|...+.+
T Consensus 194 Sl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lng 238 (347)
T KOG1442|consen 194 SLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNG 238 (347)
T ss_pred HHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999997665433 3567888999999999998886643
No 55
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.63 E-value=2.5e-05 Score=64.70 Aligned_cols=137 Identities=16% Similarity=0.107 Sum_probs=110.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 045242 10 RAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTI 89 (243)
Q Consensus 10 ~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 89 (243)
..++....+.+++.-+..+++.|+. .++.+......+-.+++.+.-...+....+-+.+ -.+++++.+..+|++| .+
T Consensus 189 ~~~gt~aai~s~lf~asvyIilR~i-Gk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP-~cgkdr~l~~~lGvfg-fi 265 (346)
T KOG4510|consen 189 DIPGTVAAISSVLFGASVYIILRYI-GKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLP-HCGKDRWLFVNLGVFG-FI 265 (346)
T ss_pred cCCchHHHHHhHhhhhhHHHHHHHh-hccccEEEEehHHHHHHHHHHHHHHhhccceecC-ccccceEEEEEehhhh-hH
Confidence 4456777777878788889999988 6677777666666666666655544433333333 3567788889999999 99
Q ss_pred HHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHH
Q 045242 90 DQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTL 155 (243)
Q Consensus 90 ~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 155 (243)
++.+.-.|+|...++..+++.++.-+++.+...++++|-+++.. |.|+++.+...+.+..
T Consensus 266 gQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws------~~Ga~~vvsS~v~~a~ 325 (346)
T KOG4510|consen 266 GQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWS------WVGAVMVVSSTVWVAL 325 (346)
T ss_pred HHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHH------hhceeeeehhHHHHHH
Confidence 99999999999999999999999999999999999999999996 9999988888777753
No 56
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.60 E-value=0.00041 Score=59.69 Aligned_cols=117 Identities=14% Similarity=0.163 Sum_probs=85.9
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKV-RPKMTLSIFVKILLLGLLEP 87 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~ 87 (243)
+..-|..+.++++++-+.+..+.|....+ .+. .-. ++++. ++-.+++.| . .|+...
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~---------------~~~~~~~~~l~~~~W--~--~G~~~~ 60 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSL---------------RAGSGGRSYLRRPLW--W--IGLLLM 60 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccc---------------cccchhhHHHhhHHH--H--HHHHHH
Confidence 55679999999999999999999987432 110 000 00000 011122222 2 233344
Q ss_pred HHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 88 TIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 88 ~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
.++..+.+.++.+.|++..+.+....-++.++++..++|||+++++ +.|..+++.|..++.
T Consensus 61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIV 121 (300)
T ss_pred hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeE
Confidence 6677888999999999999999999999999999999999999997 999999999999885
No 57
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.59 E-value=0.00064 Score=59.01 Aligned_cols=143 Identities=14% Similarity=0.152 Sum_probs=116.6
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHHHHHHHHHHhhc---CCCCCCCHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNK---GMSPHVFAVYRHAVATIVVAPFALILDR---KVRPKMTLSIFVKILLL 82 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~---~~~~~~~~~~r~~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~~~~~ 82 (243)
+...|-++.+++++++|.+.++.|.-.++ +.|-..+-.+-.++..++++|..+.... .+..-++..+...++..
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 34679999999999999999999987532 3677788888888888888876665432 22233444556778888
Q ss_pred HHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHh
Q 045242 83 GLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIK 157 (243)
Q Consensus 83 g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~ 157 (243)
+++++.+.-++|..|+-.+++-.+++-..++-..+++...++.+.++++.. ++|.+.+++|-+++...+
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNISS 392 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheeccc
Confidence 999999999999999999999999987777777888999999999999997 999999999999997444
No 58
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.38 E-value=0.0036 Score=47.56 Aligned_cols=129 Identities=18% Similarity=0.152 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 045242 15 LAVILLQFGYAGMSIFSKFALNKGMS-PHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNL 93 (243)
Q Consensus 15 ~~~~~a~~~~a~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 93 (243)
++.+++-..-+....+.-.. .+... |..-++.-+..+.+.+..+....+++.....+.-.| +...-|+++ ...-.+
T Consensus 4 lla~~aG~~i~~q~~~N~~L-~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~-w~~lGG~lG-~~~V~~ 80 (138)
T PF04657_consen 4 LLALLAGALIALQAAFNGQL-GKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPW-WAYLGGLLG-VFFVLS 80 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCCh-HHhccHHHH-HHHHHH
Confidence 44555555555555555554 34454 999999999999999988776665543322222222 334467777 888888
Q ss_pred HHHhhcccChhhhhhhcc-chhHHHHHHHHH----HhhccccccccccccchhHHHHHHHHHHH
Q 045242 94 FYTGMKYTTATFTTAMAN-VLPAFAFLMAWI----IRLEKVNFRKFHSWAKVFGTIVTVGGAMF 152 (243)
Q Consensus 94 ~~~~l~~~~~~~a~~i~~-~~Pi~~~il~~~----~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 152 (243)
..+.+.+.+++.+..+.- -+-+...+++.+ .-+++++++ |+.|+.+.++|+.+
T Consensus 81 ~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 81 NIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL 138 (138)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence 999999999999877554 455666666664 234566666 59999999999863
No 59
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.37 E-value=0.033 Score=47.32 Aligned_cols=173 Identities=16% Similarity=0.095 Sum_probs=121.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHH
Q 045242 40 SPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFL 119 (243)
Q Consensus 40 ~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~i 119 (243)
+|..+.+.+-+.+.++-.... ..++.. ...++-|+.+-..++.. .+...+-+.+++|.+=-.-.+--+.=-+=+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l--~~~k~~-~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAML--KWWKKE-LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHH--hccccc-CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 678888888888777765333 333332 22333366777777776 88999999999998755554444433344567
Q ss_pred HHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHH
Q 045242 120 MAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAG 199 (243)
Q Consensus 120 l~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~ 199 (243)
++.++.+.|.++.+ ...+.++-.|+.+..+.+.+ .+.+.....+...|..+....-+.=++
T Consensus 126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s-------------~s~~~~g~~ns~~G~~Ll~~~L~fDgf 186 (327)
T KOG1581|consen 126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNS-------------DSSSKSGRENSPIGILLLFGYLLFDGF 186 (327)
T ss_pred HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCC-------------CCccccCCCCchHhHHHHHHHHHHHhh
Confidence 88899999999986 77777777787777544321 011223345678999998888888888
Q ss_pred HHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHH
Q 045242 200 FMVLQAITLKSYP-TELSLTALICLMGTIEGTIVALF 235 (243)
Q Consensus 200 ~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (243)
-+..+.++.++.. ++..++.+..+++++....-.+.
T Consensus 187 Tn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~ 223 (327)
T KOG1581|consen 187 TNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLIL 223 (327)
T ss_pred HHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhc
Confidence 8889999888754 67888889999988888766443
No 60
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.30 E-value=0.001 Score=57.40 Aligned_cols=138 Identities=16% Similarity=0.272 Sum_probs=111.0
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHHHHH-HHHHHhhcCCC-----CCCCHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALN---KGMSPHVFAVYRHAVATIVVA-PFALILDRKVR-----PKMTLSIFVKI 79 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~---~~~~~~~~~~~r~~~~~i~l~-~~~~~~~~~~~-----~~~~~~~~~~~ 79 (243)
-+..|......+.+..+.-.++.|..+. ++.|+.....+.--.+.++++ |+....+.... ...+.. ....
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~ 238 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLIL 238 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHH
Confidence 4678999999999999999999999983 358999999999999999999 98776554332 133444 3344
Q ss_pred HHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 80 LLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 80 ~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
.+.+++. ...+..-|..+.+++|.+-++...+==++++..++++++|++++.+ ..|..+++.|+.+-.
T Consensus 239 ~~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 239 LLNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHH
Confidence 4445554 7778888999999999888887777777777888999999999998 999999999999886
No 61
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.25 E-value=0.02 Score=50.03 Aligned_cols=144 Identities=13% Similarity=0.058 Sum_probs=94.9
Q ss_pred HhhHHHHHHHHHHHHHHHHH-------HHHHHHHhCCCChHHHHHHHHH---HHHHHHHH-HHHHhh-c-CCC-----CC
Q 045242 9 IRAKPFLAVILLQFGYAGMS-------IFSKFALNKGMSPHVFAVYRHA---VATIVVAP-FALILD-R-KVR-----PK 70 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~-------~~~k~~~~~~~~~~~~~~~r~~---~~~i~l~~-~~~~~~-~-~~~-----~~ 70 (243)
+..||++.++++.+..+.++ ...+.+...+.++.....-++. +++.+.-+ ++..+. | +.. ..
T Consensus 171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~ 250 (345)
T PRK13499 171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFS 250 (345)
T ss_pred chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcc
Confidence 55789999999999999888 6666544456888877777776 55544332 222221 1 111 11
Q ss_pred CC----HHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhh---hccchh-HHHHHHHHHHhhccccccccccccchhH
Q 045242 71 MT----LSIFVKILLLGLLEPTIDQNLFYTGMKYTTATFTTA---MANVLP-AFAFLMAWIIRLEKVNFRKFHSWAKVFG 142 (243)
Q Consensus 71 ~~----~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~---i~~~~P-i~~~il~~~~~~e~~~~~~~~~~~~~~g 142 (243)
.+ .++...-.+.|+.- ...+.++..+.+..+.+.+.+ +....+ ++..+-+. ++||+-+..+|..+.-++|
T Consensus 251 ~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G 328 (345)
T PRK13499 251 LAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG 328 (345)
T ss_pred ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence 12 23333335555554 677778888888887766555 553444 66666666 6999999777777888999
Q ss_pred HHHHHHHHHHHH
Q 045242 143 TIVTVGGAMFMT 154 (243)
Q Consensus 143 ~~l~~~Gv~l~~ 154 (243)
.++.++|..++.
T Consensus 329 ~vliI~g~~lig 340 (345)
T PRK13499 329 CVVIILAANIVG 340 (345)
T ss_pred HHHHHHHHHHHh
Confidence 999999999886
No 62
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.22 E-value=0.0015 Score=48.33 Aligned_cols=68 Identities=16% Similarity=0.205 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHhhcccChhhhhhh-ccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 81 LLGLLEPTIDQNLFYTGMKYTTATFTTAM-ANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 81 ~~g~~~~~~~~~~~~~~l~~~~~~~a~~i-~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
...+.++...+.++..++++.|.+.+=.+ ....-+.+++++.++++|++++.+ +.|+.+.++|++.+-
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhh
Confidence 34556668899999999999999887654 467888999999999999999996 999999999998885
No 63
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.19 E-value=0.0022 Score=46.74 Aligned_cols=67 Identities=12% Similarity=0.235 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHhhcccChhhhhhh-ccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 82 LGLLEPTIDQNLFYTGMKYTTATFTTAM-ANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 82 ~g~~~~~~~~~~~~~~l~~~~~~~a~~i-~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
..+.++...+.++..++++.|.+.+=.+ ....-+.+++.+++++||++++.+ +.|+.+.+.|++.+.
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence 3455668889999999999999886554 557788889999999999999996 999999999999995
No 64
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.18 E-value=0.012 Score=42.84 Aligned_cols=64 Identities=13% Similarity=0.167 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHhhcccChhhhh-hhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHH
Q 045242 84 LLEPTIDQNLFYTGMKYTTATFTT-AMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFM 153 (243)
Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~a~-~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 153 (243)
+.++...+.+...++|+.|.+.+= +....--+.+++.+++++||++++.+ +.|+.+.+.|++.+
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence 445578899999999999998864 45567788899999999999999996 99999999999886
No 65
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.03 E-value=0.00013 Score=59.83 Aligned_cols=189 Identities=14% Similarity=0.196 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 045242 13 PFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQN 92 (243)
Q Consensus 13 ~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (243)
.++..++-++.||+...+.... . =+|.+-+.---+-+.++.+. .++.. .+..+.+.+..-+..|.+- .+++.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~--G-G~p~qQ~lGtT~GALifaii-v~~~~---~p~~T~~~~iv~~isG~~W-s~GQ~ 74 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF--G-GKPYQQTLGTTLGALIFAII-VFLFV---SPELTLTIFIVGFISGAFW-SFGQA 74 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec--C-CChhHhhhhccHHHHHHHHH-Hheee---cCccchhhHHHHHHhhhHh-hhhhh
Confidence 4677888999999999888776 3 34444443333333333332 22322 2456777676666667775 89999
Q ss_pred HHHHhhcccChhhhhhhcc-chhHHHHHHHHHHhhccccccccccccchh---HHHHHHHHHHHHHHHhCCccCCCCCCC
Q 045242 93 LFYTGMKYTTATFTTAMAN-VLPAFAFLMAWIIRLEKVNFRKFHSWAKVF---GTIVTVGGAMFMTLIKGPVLDLPWTNH 168 (243)
Q Consensus 93 ~~~~~l~~~~~~~a~~i~~-~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~---g~~l~~~Gv~l~~~~~~~~~~~~~~~~ 168 (243)
..+.+.++.+++++..++. ++-+-+-+.+.+.+||=-+..+ .++ ++++.++|+++....+ ++
T Consensus 75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~-----~IlG~iAliliviG~~lTs~~~---------~~ 140 (288)
T COG4975 75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ-----IILGFIALILIVIGIYLTSKQD---------RN 140 (288)
T ss_pred hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh-----HHHHHHHHHHHHHhheEeeeec---------cc
Confidence 9999999999999998775 7778888888889998666554 222 3334444444443111 11
Q ss_pred ccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q 045242 169 NYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIE 228 (243)
Q Consensus 169 ~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~ 228 (243)
|-+ .++..+...|....+.+.+.|..|.+..+...-+--+.....+..+..+++.
T Consensus 141 nk~-----~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali 195 (288)
T COG4975 141 NKE-----EENPSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALI 195 (288)
T ss_pred ccc-----ccChHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHH
Confidence 111 2233446678888788888888888886654422113344444445554443
No 66
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.03 E-value=0.0032 Score=45.22 Aligned_cols=66 Identities=11% Similarity=0.111 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHhhcccChhhh-hhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 83 GLLEPTIDQNLFYTGMKYTTATFT-TAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 83 g~~~~~~~~~~~~~~l~~~~~~~a-~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
.++++...+.+...++++.|.+.+ ++....--+.+++.++++++|+++..+ ++++.+.++|++.+-
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk 102 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhh
Confidence 444557899999999999999885 456678889999999999999999996 999999999999884
No 67
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=96.97 E-value=0.011 Score=48.16 Aligned_cols=185 Identities=14% Similarity=0.125 Sum_probs=121.3
Q ss_pred HHHHHHHHhC-CCC-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhh
Q 045242 28 SIFSKFALNK-GMS-PHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTTATF 105 (243)
Q Consensus 28 ~~~~k~~~~~-~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~ 105 (243)
.+-.|+.++. +++ -+.+.+.|.+...+-+..+-... -. +.+.++..+.+..+++. ......--.++||.++..
T Consensus 22 TltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~-~~---~fR~t~aK~WfpiSfLL-v~MIyt~SKsLqyL~vpi 96 (309)
T COG5070 22 TLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLR-LV---EFRLTKAKKWFPISFLL-VVMIYTSSKSLQYLAVPI 96 (309)
T ss_pred HHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHh-Hh---heehhhhhhhcCHHHHH-HHHHHhcccceeeeeeeH
Confidence 3344555422 344 45566667666554444322111 11 12222223333334443 444445568899999999
Q ss_pred hhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcchH
Q 045242 106 TTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPIK 185 (243)
Q Consensus 106 a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (243)
-+++-++.-+..+..+.+++|.+++..+ ....++.+..-+....++.. . .....+....
T Consensus 97 YTiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q-------------~--~~~~~~~lN~ 155 (309)
T COG5070 97 YTIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQ-------------A--SAFKAQILNP 155 (309)
T ss_pred HHHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccchhh-------------H--HHHHhcccCC
Confidence 9999999999999999999999999987 88887777776666421110 0 0111234567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHHhcc
Q 045242 186 GALMITIGCFSWAGFMVLQAITLKSYP-TELSLTALICLMGTIEGTIVALFLER 238 (243)
Q Consensus 186 G~~~~llaal~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (243)
|.+|+..-++.-+.|....|+..+-.. .....++|..+.+..+++.+.+++|.
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~ed 209 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFED 209 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhcc
Confidence 999999999999999998887665321 25788899999999999999988765
No 68
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.96 E-value=0.0021 Score=46.91 Aligned_cols=110 Identities=14% Similarity=0.235 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045242 18 ILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTG 97 (243)
Q Consensus 18 ~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 97 (243)
++..++||....+.|.. .++.++..-.. |..-....+ -.+++.. ..+...-.+...|++.
T Consensus 2 l~Vg~~WG~Tnpfik~g-~~~~~~~~~~~-~~~~~~~~L-------------l~n~~y~-----ipf~lNq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRG-SSGLEKVKASL-QLLQEIKFL-------------LLNPKYI-----IPFLLNQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHH-HhhcCCccchH-HHHHHHHHH-------------HHhHHHH-----HHHHHHHHHHHHHHHH
Confidence 35678999999999998 44454433331 322211110 0122322 2334457788889999
Q ss_pred hcccChhhhhhhc-cchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHH
Q 045242 98 MKYTTATFTTAMA-NVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFM 153 (243)
Q Consensus 98 l~~~~~~~a~~i~-~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 153 (243)
+...+.+.+..+. ++.=++|++.++++.+|..+++. ++|+.+.+.|+.+.
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence 9999999988875 78889999999877777777765 99999999998653
No 69
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.91 E-value=0.006 Score=44.04 Aligned_cols=65 Identities=11% Similarity=0.059 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHhhcccChhhhh-hhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 84 LLEPTIDQNLFYTGMKYTTATFTT-AMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~a~-~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
+.++..++.+...++++.|.+.+= +....--+.+++.+.+++||++++.+ +.|+.+.+.|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence 555688999999999999998864 45567888999999999999999996 999999999999884
No 70
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.74 E-value=0.022 Score=46.77 Aligned_cols=172 Identities=13% Similarity=0.053 Sum_probs=115.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHH
Q 045242 41 PHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLM 120 (243)
Q Consensus 41 ~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il 120 (243)
...+.++++....++.=.+..+++ +.+. -+.+.+ ....++ ..+.++....+.++|+.|=-...+--+.-|+=+.++
T Consensus 53 alaLVf~qC~~N~vfAkvl~~ir~-~~~~-D~t~~~-~YaAcs-~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil 128 (337)
T KOG1580|consen 53 ALALVFFQCTANTVFAKVLFLIRK-KTEI-DNTPTK-MYAACS-ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL 128 (337)
T ss_pred HHHHHHHHHHHHHHHHHhheeecc-cccc-cCCcch-HHHHHH-HHHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence 455666676666665543322222 1211 122222 233333 344788888999999999888888888899999999
Q ss_pred HHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 045242 121 AWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGF 200 (243)
Q Consensus 121 ~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~ 200 (243)
+.++.+++.+|++ ....+.+++|+.+.. .++.. .++..+.....|.++.+++--.=+.-
T Consensus 129 GVl~~~KsY~w~k------Y~cVL~IV~GValFm-YK~~K--------------v~g~e~~t~g~GElLL~lSL~mDGlT 187 (337)
T KOG1580|consen 129 GVLFAHKSYHWRK------YCCVLMIVVGVALFM-YKENK--------------VGGAEDKTFGFGELLLILSLAMDGLT 187 (337)
T ss_pred ehhhhcccccHHH------HHHHHHHHHHHHHhh-ccccc--------------cCCCcccccchHHHHHHHHHHhcccc
Confidence 9999999999885 999999999999985 44210 01233455678999988887777777
Q ss_pred HHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHHhc
Q 045242 201 MVLQAITLKSYP-TELSLTALICLMGTIEGTIVALFLE 237 (243)
Q Consensus 201 ~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (243)
...+.++-+.+. ..-.++.+..+.+++.+....++.+
T Consensus 188 g~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTG 225 (337)
T KOG1580|consen 188 GSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTG 225 (337)
T ss_pred hhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehh
Confidence 777777555443 3456777788888877765554443
No 71
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.62 E-value=0.006 Score=43.06 Aligned_cols=57 Identities=9% Similarity=0.024 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHhhcccChhhh-hhhccchhHHHHHHHHHHhhccccccccccccchhHHHH
Q 045242 83 GLLEPTIDQNLFYTGMKYTTATFT-TAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIV 145 (243)
Q Consensus 83 g~~~~~~~~~~~~~~l~~~~~~~a-~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l 145 (243)
.+.++..++.++..++++.|.+.+ ++......+.+.+.+.+++||++++.+ +.|+.+
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l 92 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence 444568889999999999999998 456678999999999999999999996 888765
No 72
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=96.47 E-value=0.18 Score=43.71 Aligned_cols=181 Identities=14% Similarity=0.113 Sum_probs=117.1
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHh-hcCC----CCCCCHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALIL-DRKV----RPKMTLSIFVKILLLG 83 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~-~~~~----~~~~~~~~~~~~~~~g 83 (243)
+-..|+++..++.++-|..++..|.. ++.+-...-..+.+++ -+..|..... .-++ ....+.+.+.+..+.|
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~s-wli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV--KGWSWESYWLVQGIFS-WLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc--CCccHHHHHHHHHHHH-HHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence 55679999999999999999999998 4466555555555554 3444543322 2222 1234556677778888
Q ss_pred HHHHHHHHHHHHHhhcccChhhhh-hhccchhHHHHHHHHHHhhcccc--ccccccccchhHHHHHHHHHHHHHHHhCCc
Q 045242 84 LLEPTIDQNLFYTGMKYTTATFTT-AMANVLPAFAFLMAWIIRLEKVN--FRKFHSWAKVFGTIVTVGGAMFMTLIKGPV 160 (243)
Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~a~-~i~~~~Pi~~~il~~~~~~e~~~--~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~ 160 (243)
++- .++...|=.+++|++.+... +...+.-.+-.++-.++.++ ++ ..++-.+.-+.|++++++|+.+.... |..
T Consensus 81 ~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~-~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A-G~~ 157 (344)
T PF06379_consen 81 VLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGT-FDELLATPSGQIVLLGVAVCLIGIAICGKA-GSM 157 (344)
T ss_pred HHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCc-ccccccCCCchhhhhHHHHHHHHHHHHhHH-HHh
Confidence 886 88999999999999998754 44456666666665555332 11 11122334599999999999999632 321
Q ss_pred cCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 045242 161 LDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQ 204 (243)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~ 204 (243)
.+ .+.. .+..+.+...|.+.+++|.+.=|+++.-.
T Consensus 158 Ke-----~~~~----~~~~efn~~kGl~iAv~sGv~Sa~fn~g~ 192 (344)
T PF06379_consen 158 KE-----KELG----EEAKEFNFKKGLIIAVLSGVMSACFNFGL 192 (344)
T ss_pred hh-----hhhc----cchhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 11 1111 12234567889999999998777766653
No 73
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.46 E-value=0.0016 Score=55.52 Aligned_cols=125 Identities=14% Similarity=0.179 Sum_probs=90.2
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPT 88 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 88 (243)
++..|..+.+.+.+..|.+.++-|+...+ . .. . .....+..++-. ++ +.-+.|++...
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r-~----------~~-----~--~~ra~~gg~~yl--~~--~~Ww~G~ltm~ 75 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKR-A----------GA-----S--GLRAGEGGYGYL--KE--PLWWAGMLTMI 75 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHH-H----------hh-----h--cccccCCCcchh--hh--HHHHHHHHHHH
Confidence 56678888999999999999999888543 1 00 0 000011111111 22 23344666667
Q ss_pred HHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccC
Q 045242 89 IDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLD 162 (243)
Q Consensus 89 ~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~ 162 (243)
++-..-|.+..+.|++..+.+..+.-+..++++..+++||+++.. .+|.+++++|..+++ .++|.++
T Consensus 76 vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV-~haP~e~ 142 (335)
T KOG2922|consen 76 VGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIV-IHAPKEQ 142 (335)
T ss_pred HHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEE-EecCccc
Confidence 788888888999999999999999999999999999999999997 999999999988774 4444443
No 74
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.44 E-value=0.037 Score=47.03 Aligned_cols=141 Identities=12% Similarity=0.120 Sum_probs=111.4
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhcCCC-----CCCCHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNK-GMSPHVFAVYRHAVATIVVAPFALILDRKVR-----PKMTLSIFVKILLL 82 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 82 (243)
+...|+.++...-+.=|+...-.+..+++ ++++.++.+.-.+..++.-..... .....+ .+.+++-++.+++.
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li-~qg~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLI-LQGHLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhh-cCCCCchHHHHHHcChhHHHHHHHH
Confidence 45568888877777667777777766543 589999999999998887665422 222211 22455667788888
Q ss_pred HHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHh
Q 045242 83 GLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIK 157 (243)
Q Consensus 83 g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~ 157 (243)
++++ +.++.+.++-++.-++-.-+.+..+=-+++.+++.+.++.++++.| |.|..+.|.|+.+=.+.+
T Consensus 248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l~~~~k 315 (327)
T KOG1581|consen 248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFLEILLK 315 (327)
T ss_pred HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHHHHHHH
Confidence 9998 9999999999999888888888888899999999999999999998 999999999999876543
No 75
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.39 E-value=0.061 Score=45.05 Aligned_cols=187 Identities=12% Similarity=0.076 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 045242 13 PFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQN 92 (243)
Q Consensus 13 ~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (243)
|++.++++++.+|.+++-.|.. +. -|++.+-.+......+.-+....... .+++. .+.++-|.+ .+.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~~---~p~f~----p~amlgG~l-W~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLILG---FPPFY----PWAMLGGAL-WATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhcC---CCcce----eHHHhhhhh-hhcCce
Confidence 4678899999999999999987 43 67766665555444444333332221 12221 123333444 477888
Q ss_pred HHHHhhcccChhhhhhhccch-hHHHHHHHHH-HhhccccccccccccchhHHHHHHHHHHHHHHHhCCccC-CCCCC--
Q 045242 93 LFYTGMKYTTATFTTAMANVL-PAFAFLMAWI-IRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLD-LPWTN-- 167 (243)
Q Consensus 93 ~~~~~l~~~~~~~a~~i~~~~-Pi~~~il~~~-~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~-~~~~~-- 167 (243)
+-.-.++..+-+..-.+-+.. -+..-..+.+ +++++.... ++.....+|++++++|..+..+-++...+ ....+
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 888888988888887776653 3333333333 344333322 33455688999999998887654443311 11110
Q ss_pred -------CccCcC---CCCCC------CCCcchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 045242 168 -------HNYHQE---STSNS------SVQSPIKGALMITIGCFSWAGFMVLQAITLKS 210 (243)
Q Consensus 168 -------~~~~~~---~~~~~------~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~ 210 (243)
++.++. .++++ ...+...|..+++.+++.|+...+=.....++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 000010 00111 11247899999999999999987766665544
No 76
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.27 E-value=0.015 Score=47.63 Aligned_cols=58 Identities=10% Similarity=0.014 Sum_probs=52.8
Q ss_pred HHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHH
Q 045242 88 TIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAM 151 (243)
Q Consensus 88 ~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 151 (243)
.....+....+++.++..-+....+.++++.+++.++++|+++..+ +.|..+.+.|+.
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~ 220 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATF 220 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeE
Confidence 6667778999999999999999999999999999999999999997 999999888764
No 77
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=95.98 E-value=0.012 Score=49.26 Aligned_cols=172 Identities=11% Similarity=0.077 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhh-hhhhccchhHHHHHH
Q 045242 42 HVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTTATF-TTAMANVLPAFAFLM 120 (243)
Q Consensus 42 ~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-a~~i~~~~Pi~~~il 120 (243)
..+++.+++.-++--+++.-..... +++.+.|++...... + ...+.+-++++++-=+.. --++-+-.++.+.++
T Consensus 34 NLITFaqFlFia~eGlif~skf~~~-k~kiplk~Y~i~V~m--F--F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTSKFFTV-KPKIPLKDYAITVAM--F--FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eehHHHHHHHHHHhceeeecccccc-CCCCchhhhheehhe--e--eeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 5678888888777766654222222 255666765443322 2 345556677777643333 334556789999999
Q ss_pred HHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 045242 121 AWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGF 200 (243)
Q Consensus 121 ~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~ 200 (243)
++++.|+|.+.+| ..++++.-+|+++.++.+....+. .+..++.++ ...+...+..|..+...+-+.=|.-
T Consensus 109 g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~--~~~~l~~~~-~~~~~~~w~iGi~lL~~al~~sa~m 179 (330)
T KOG1583|consen 109 GWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRS--KLSGLDSGS-AQSDFFWWLIGIALLVFALLLSAYM 179 (330)
T ss_pred HHHhccceeehhh------hhhHHhhhhhheeEEeecCcchhh--hhcccccCc-ccccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997 999999999999998765433221 111111111 1123455788988888887777777
Q ss_pred HHHHHHHHhcCC-chhHHHHHHHHHHHH
Q 045242 201 MVLQAITLKSYP-TELSLTALICLMGTI 227 (243)
Q Consensus 201 ~v~~k~~~~~~~-~~~~~~~~~~~~~~~ 227 (243)
.+++...-+++. ++.+.++|.=..+..
T Consensus 180 giyqE~~Y~kyGKh~~EalFytH~LsLP 207 (330)
T KOG1583|consen 180 GIYQETTYQKYGKHWKEALFYTHFLSLP 207 (330)
T ss_pred HHHHHHHHHHhcCChHHHHHHHHHhccc
Confidence 777765555543 566777776655443
No 78
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.82 E-value=0.19 Score=38.55 Aligned_cols=137 Identities=14% Similarity=0.056 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 045242 13 PFLAVILLQFGYAGMSIFSKFALNKGM-SPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQ 91 (243)
Q Consensus 13 ~~~~~~~a~~~~a~~~~~~k~~~~~~~-~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 91 (243)
..+..+.+..+-.....+.-.. .+.. +|..-.+.-+..+.+++..+.+..+++......++.-++...-|.+| ..+-
T Consensus 6 ~ll~~i~aG~~l~~Q~~iN~qL-~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~v 83 (150)
T COG3238 6 YLLFAILAGALLPLQAAINGRL-ARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIFV 83 (150)
T ss_pred HHHHHHHHhhhhhhHHHHHHHH-HHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhhh
Confidence 4444455545444444444333 2333 59999999999999998887776443332221233233444556665 6666
Q ss_pred HHHHHhhcccChhhhh-hhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHH
Q 045242 92 NLFYTGMKYTTATFTT-AMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFM 153 (243)
Q Consensus 92 ~~~~~~l~~~~~~~a~-~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 153 (243)
..-.......+++... .+..-+-+...+++.+-.... + ++++|..|+.|+++.++|+.++
T Consensus 84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~-~-~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGV-P-KRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC-C-cCCCCHHHHHHHHHHHHHHHHh
Confidence 6666667777776654 455566677777766433210 0 1234455799999999995444
No 79
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.62 E-value=0.099 Score=43.04 Aligned_cols=136 Identities=11% Similarity=0.047 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhcCC----CCCCCHHHHHHHHHHHHHH
Q 045242 12 KPFLAVILLQFGYAGMSIFSKFALNK-GMSPHVFAVYRHAVATIVVAPFALILDRKV----RPKMTLSIFVKILLLGLLE 86 (243)
Q Consensus 12 ~~~~~~~~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~ 86 (243)
.|.++++++-..=|.........-.+ .-+...+.++-++.+.+.+..-.++...-. ........++.+.++++.+
T Consensus 172 ~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s 251 (337)
T KOG1580|consen 172 FGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIAS 251 (337)
T ss_pred hHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 36666666666666666665544221 134567777778887777664333221100 0111335577788888887
Q ss_pred HHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 87 PTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 87 ~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
.+++.+.|.-+.+-++-.-+++..+--.|+++.+.++++..++.+| |.|.++.+.|...=.
T Consensus 252 -~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 252 -CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTADV 312 (337)
T ss_pred -HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhhHh
Confidence 9999999999999999999999999999999999999999999998 999999999987764
No 80
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.36 E-value=0.19 Score=43.13 Aligned_cols=138 Identities=13% Similarity=0.146 Sum_probs=103.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCC-CHHHHHHHHHHH
Q 045242 11 AKPFLAVILLQFGYAGMSIFSKFALNK-GMSPHVFAVYRHAVATIVVAPFALILDRK-----VRPKM-TLSIFVKILLLG 83 (243)
Q Consensus 11 ~~~~~~~~~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~r~~~~~i~l~~~~~~~~~~-----~~~~~-~~~~~~~~~~~g 83 (243)
..|+.++....+.-+...+..|...+. +.+-+.+.++..+.+...+.......+.. +.... +...+..+.+.+
T Consensus 156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc 235 (314)
T KOG1444|consen 156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC 235 (314)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence 358999999999999999999987643 57888899999999888777665444321 11112 233355666666
Q ss_pred HHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHH
Q 045242 84 LLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTL 155 (243)
Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~ 155 (243)
+++ .+-..+-+.+.+..++...++.-...-..+.+...+++++++++.. .+|+.+++.|.++-..
T Consensus 236 v~g-f~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n------~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 236 VMG-FGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLN------VIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHH-HHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhh------hHHHHHHhhhhhHHhh
Confidence 666 6777788899999999888887766666777777778888999886 9999999999988763
No 81
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=94.95 E-value=0.12 Score=39.36 Aligned_cols=55 Identities=22% Similarity=0.071 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC-----C-chhHHHHHHHHHHHHHHHHHHHHhccCC
Q 045242 186 GALMITIGCFSWAGFMVLQAITLKSY-----P-TELSLTALICLMGTIEGTIVALFLERGN 240 (243)
Q Consensus 186 G~~~~llaal~~a~~~v~~k~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (243)
|.++++.|.++.+.+.++.|+..++. . |+.....+....+.+.++|...+.|...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~ 61 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQ 61 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 67899999999999999999988772 2 7899999999999999999998877643
No 82
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=94.79 E-value=0.8 Score=39.26 Aligned_cols=138 Identities=16% Similarity=0.150 Sum_probs=94.1
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHHHHHHHHHHHhhcCCCC-------CCC----H
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKG----MSPHVFAVYRHAVATIVVAPFALILDRKVRP-------KMT----L 73 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~----~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~-------~~~----~ 73 (243)
=+..|..++..++++-|.-+.+.++.+.+. -+|++....-.-...+.++|..+..++.... ..+ .
T Consensus 161 f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~ 240 (349)
T KOG1443|consen 161 FNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLIL 240 (349)
T ss_pred eeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHH
Confidence 345699999999999999999999887542 3688888887778888888887777664321 111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHH
Q 045242 74 SIFVKILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFM 153 (243)
Q Consensus 74 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 153 (243)
+....+.+.|... .+--.+.+.-+..++.-..++..-.-=+-+.+++..+.+|+++... |.|..++..|+..-
T Consensus 241 rv~g~i~l~g~la-F~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN------~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 241 RVIGLISLGGLLA-FLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLN------WLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhH------HHHHHHHHHHHHHh
Confidence 2222222333332 2222234444555555555554445567788899999999999887 99999999999876
No 83
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=94.25 E-value=0.0043 Score=51.07 Aligned_cols=136 Identities=12% Similarity=0.167 Sum_probs=85.1
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPT 88 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 88 (243)
+..||+..++.+.+.+-.+.+..+.---++.+...--..-+.++++.+. . .+. .++.++. .+.-...|+.- +
T Consensus 149 n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~~---~--~~~-~~~~~K~-t~~nii~G~~W-a 220 (288)
T COG4975 149 NLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALILG---F--FKM-EKRFNKY-TWLNIIPGLIW-A 220 (288)
T ss_pred hhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHHh---h--ccc-ccchHHH-HHHHHhhHHHH-H
Confidence 4456777777777766555555554411233333333333344333332 1 111 1233444 44556667776 8
Q ss_pred HHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 89 IDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 89 ~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
.++..++++-+..+.+.+-.++.+.-+...+=+.+++|||-++++ =..-++|+++.++|.+++.
T Consensus 221 ~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkE--m~~v~iGiilivvgai~lg 284 (288)
T COG4975 221 IGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKE--MVYVIIGIILIVVGAILLG 284 (288)
T ss_pred hhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhh--hhhhhhhHHHHHHHhhhhh
Confidence 899999999999999888888889999999999999999999886 1222455556666665553
No 84
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=94.05 E-value=1.3 Score=36.97 Aligned_cols=125 Identities=10% Similarity=-0.018 Sum_probs=82.4
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-HHHHHHHhhcCCCC-CCCHHHHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIV-VAPFALILDRKVRP-KMTLSIFVKILLLGLLE 86 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~-l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~ 86 (243)
+...|+.++++++++-|...+.....++++-.++..--.+...-+++ .++......+.... .--.+.+-...+.-++.
T Consensus 111 ~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~ 190 (244)
T PF04142_consen 111 NPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFL 190 (244)
T ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHH
Confidence 45679999999999999999999888776545555555554444444 33332222221111 11112222333344444
Q ss_pred HHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccc
Q 045242 87 PTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRK 133 (243)
Q Consensus 87 ~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~ 133 (243)
.+.+..+...-++|.+...=..-....-+.+.++++.+++.+++...
T Consensus 191 ~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f 237 (244)
T PF04142_consen 191 QAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSF 237 (244)
T ss_pred HHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHH
Confidence 46666777778898888877778888899999999999999999874
No 85
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=93.75 E-value=0.59 Score=38.31 Aligned_cols=139 Identities=10% Similarity=0.130 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhcCCC----CCCCHHHHHHHHHHHHHH
Q 045242 12 KPFLAVILLQFGYAGMSIFSKFALN-KGMSPHVFAVYRHAVATIVVAPFALILDRKVR----PKMTLSIFVKILLLGLLE 86 (243)
Q Consensus 12 ~~~~~~~~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~ 86 (243)
.|+.++...++.-+..-...|...+ .+..-++-.++..+++..+++.+....+.... ...+.....+.+..|+..
T Consensus 155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s 234 (309)
T COG5070 155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS 234 (309)
T ss_pred CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH
Confidence 3777777777777777777776642 24667888999999999999888777654332 123333345666666665
Q ss_pred HHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHh
Q 045242 87 PTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIK 157 (243)
Q Consensus 87 ~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~ 157 (243)
.+-..+-.++++-++.+.-+.+-.+.-.-.++.+.++++|+.+... +.++++++....+-...+
T Consensus 235 -vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~s------i~sillGflsg~iYavak 298 (309)
T COG5070 235 -VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAVAK 298 (309)
T ss_pred -hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHHHH
Confidence 6677788899999999998888888888888999999999999885 999999998877765544
No 86
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=92.71 E-value=0.24 Score=41.66 Aligned_cols=187 Identities=12% Similarity=0.110 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHh-CCCCh--HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 045242 23 GYAGMSIFSKFALN-KGMSP--HVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTGMK 99 (243)
Q Consensus 23 ~~a~~~~~~k~~~~-~~~~~--~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~ 99 (243)
.+=.+..+..+..+ .++.| +.+++.|+++-..+.+.-.... +.+++..++|. ...++.+. ...+.+...++.
T Consensus 54 ~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k~r~iP~rt---Y~~la~~t-~gtmGLsn~Slg 128 (367)
T KOG1582|consen 54 LYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLI-QTKRRVIPWRT---YVILAFLT-VGTMGLSNGSLG 128 (367)
T ss_pred HHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEee-cccceecchhH---hhhhHhhh-hhccccCcCccc
Confidence 33455555555543 24553 5778888877654444322111 12223445554 34444443 445555555555
Q ss_pred ccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCC
Q 045242 100 YTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSS 179 (243)
Q Consensus 100 ~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (243)
|++=-.-.++-.+--+=+.+.+.++=+.|..+.+ ..++.+..+|.++.++.++ ...
T Consensus 129 YLNYPtQviFKccKliPVmiggifIqGkRY~v~d------~~aA~lm~lGli~FTLADs------------------~~s 184 (367)
T KOG1582|consen 129 YLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTLADS------------------QTS 184 (367)
T ss_pred cccCcHHHHHHhhhhhhhhheeeeeccccccHHH------HHHHHHHHHHHHhhhhccc------------------ccC
Confidence 5543333333332222234566677778888886 9999999999999985443 122
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHHHHHhcc
Q 045242 180 VQSPIKGALMITIGCFSWAGFMVLQAITLKSYP-TELSLTALICLMGTIEGTIVALFLER 238 (243)
Q Consensus 180 ~~~~~~G~~~~llaal~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (243)
+..+..|....-.|-++=|.---++.+.++..| +...+.++...+|.+.++....+.++
T Consensus 185 PNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge 244 (367)
T KOG1582|consen 185 PNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGE 244 (367)
T ss_pred CCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhccc
Confidence 334567888777777776665555666677665 45677888888888888777666544
No 87
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=89.88 E-value=0.52 Score=39.81 Aligned_cols=141 Identities=17% Similarity=0.134 Sum_probs=94.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhcCC----CCC-CCHHHHHHHHHHHH
Q 045242 11 AKPFLAVILLQFGYAGMSIFSKFALNK-GMSPHVFAVYRHAVATIVVAPFALILDRKV----RPK-MTLSIFVKILLLGL 84 (243)
Q Consensus 11 ~~~~~~~~~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~----~~~-~~~~~~~~~~~~g~ 84 (243)
+.|.++.+.+++.-|.+.+..|..+.. +-.-+.++++-...+.++.+|.......-+ .++ ...+-|..+.+.|+
T Consensus 184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsgl 263 (347)
T KOG1442|consen 184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGL 263 (347)
T ss_pred hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHH
Confidence 569999999999999999999987533 234677888999999999999877653322 122 25555666666777
Q ss_pred HHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhC
Q 045242 85 LEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKG 158 (243)
Q Consensus 85 ~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~ 158 (243)
+|..+++ ....-++-++|-+-.+-...-...=.+++..+.+|..+... |.+-++.+.|...-+.-++
T Consensus 264 fgF~mgy-vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 264 FGFAMGY-VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHHHhhh-eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHHH
Confidence 7744443 22333444444221111111233445677888999988885 9999999999998886665
No 88
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=89.58 E-value=12 Score=32.68 Aligned_cols=141 Identities=11% Similarity=0.052 Sum_probs=87.5
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC--CHHHHHHHHHHHHH
Q 045242 8 YIRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKM--TLSIFVKILLLGLL 85 (243)
Q Consensus 8 ~~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~ 85 (243)
.+...|+.+++.++..-|+..+.-..+++++-.+.++=-.|.-.-++++..+.......+.... -...|-...+.-++
T Consensus 179 ~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl 258 (345)
T KOG2234|consen 179 QNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVL 258 (345)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHH
Confidence 3566799999999999999999888887665555555555544444443333322211111100 00111223333333
Q ss_pred HHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 86 EPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 86 ~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
..+.+..+...-++|.+-..=..-..+.-+++.+.++.+++.+++... ..|+.+++..+.+-.
T Consensus 259 ~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F------~lG~~lVi~Si~lY~ 321 (345)
T KOG2234|consen 259 LNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYF------LLGALLVILSIFLYS 321 (345)
T ss_pred HHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHH------HHHHHHHHHHHHHhh
Confidence 334444555555666655555555556788999999999999999886 899988888887774
No 89
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=88.29 E-value=0.93 Score=32.47 Aligned_cols=110 Identities=12% Similarity=0.189 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 045242 16 AVILLQFGYAGMSIFSKFALNKGMSP------HVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTI 89 (243)
Q Consensus 16 ~~~~a~~~~a~~~~~~k~~~~~~~~~------~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 89 (243)
-++...++||....+.|.. +.+.+. ....+.|-.. . ...+++++..+++ .-.
T Consensus 7 ~lvaVgllWG~Tnplirrg-s~g~~~v~~~~~k~~~~lqe~~---------------t-l~l~w~Y~iPFll-----Nqc 64 (125)
T KOG4831|consen 7 KLVAVGLLWGATNPLIRRG-SLGWDKVKSSSRKIMIALQEMK---------------T-LFLNWEYLIPFLL-----NQC 64 (125)
T ss_pred HHHHHHHHHccccHHHHHH-HhhHhhccCchHHHHHHHHHHH---------------H-HHHhHHHHHHHHH-----HHh
Confidence 4667788999999999987 433321 1122222111 1 1234444444332 244
Q ss_pred HHHHHHHhhcccChhhhhhhcc-chhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHH
Q 045242 90 DQNLFYTGMKYTTATFTTAMAN-VLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFM 153 (243)
Q Consensus 90 ~~~~~~~~l~~~~~~~a~~i~~-~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 153 (243)
+..+||.-++..+.+.+.-+.+ +.-.++++.+..+..|....+. +.|..+...|+.+.
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a------~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLA------LLGTSLIVFGIWLC 123 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhcccccccee------ehhhhHHhhhhhhe
Confidence 5677888889999888876554 5668888888866655555554 99999999998775
No 90
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=88.23 E-value=0.62 Score=33.54 Aligned_cols=42 Identities=38% Similarity=0.488 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhcc
Q 045242 195 FSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIVALFLER 238 (243)
Q Consensus 195 l~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (243)
++|+.+.+..|+..++. |+.....+++..+++ .++...+.+.
T Consensus 1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~ 42 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGR 42 (126)
T ss_pred ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcc
Confidence 47899999999999998 599999999999998 6666666554
No 91
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=87.39 E-value=4.1 Score=34.54 Aligned_cols=138 Identities=10% Similarity=0.110 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhcCC-----CCCCCHHHHHHHHHHHHHH
Q 045242 13 PFLAVILLQFGYAGMSIFSKFALN-KGMSPHVFAVYRHAVATIVVAPFALILDRKV-----RPKMTLSIFVKILLLGLLE 86 (243)
Q Consensus 13 ~~~~~~~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~ 86 (243)
|+...-.|-+.=|.-.-+...++. ++-+..++.++...++.++++........-. ..+-+++.....++.+..+
T Consensus 191 Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~g 270 (367)
T KOG1582|consen 191 GVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAG 270 (367)
T ss_pred eHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHh
Confidence 444333333333433333333332 3467788889999999888876655432211 1123455666777777776
Q ss_pred HHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHh
Q 045242 87 PTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIK 157 (243)
Q Consensus 87 ~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~ 157 (243)
.++......-++.-++..++.+...---.+.+++++++.++++... ..+.++.+.|+++=..++
T Consensus 271 -ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy------~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 271 -YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQY------VWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred -HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHH------hhhhHHHHHHHHhhcccC
Confidence 6666666666677788888888888889999999999999999886 889999999999886544
No 92
>COG2510 Predicted membrane protein [Function unknown]
Probab=85.12 E-value=5.2 Score=29.94 Aligned_cols=52 Identities=13% Similarity=-0.005 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhcc
Q 045242 186 GALMITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIVALFLER 238 (243)
Q Consensus 186 G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (243)
-.++++++++.++...+..|--.++. ||...+........+.+..+....++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~ 55 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN 55 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc
Confidence 45799999999999999999877777 78899999998888888877766544
No 93
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=82.61 E-value=15 Score=31.28 Aligned_cols=132 Identities=14% Similarity=0.114 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHH-------hhcCC---CCCC---CHHHHH
Q 045242 12 KPFLAVILLQFGYAGMSIFSKFALNK-GMSPHVFAVYRHAVATIVVAPFALI-------LDRKV---RPKM---TLSIFV 77 (243)
Q Consensus 12 ~~~~~~~~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~r~~~~~i~l~~~~~~-------~~~~~---~~~~---~~~~~~ 77 (243)
-|+.++.++.+.-|.+.+.....+++ |-++-+..++-.+++...++...-- ..+.+ .+.. -+..|.
T Consensus 164 iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~ 243 (330)
T KOG1583|consen 164 IGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWV 243 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHH
Confidence 48888888888888888888766643 6889999999999886655432100 00000 0000 112122
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccChhh----hhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHH
Q 045242 78 KILLLGLLEPTIDQNLFYTGMKYTTATF----TTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFM 153 (243)
Q Consensus 78 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~----a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 153 (243)
.+ +...+.+..-..|+..+++-. ++++..+=-.+..+++.+.++..+++.. |+|+.+.+.|..+-
T Consensus 244 yL-----l~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h------~lGa~lVF~Gt~~f 312 (330)
T KOG1583|consen 244 YL-----LFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWH------WLGAALVFFGTLLF 312 (330)
T ss_pred HH-----HHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHH------HHHHHHHHHHHHHH
Confidence 22 223455555555554444433 4445555678899999999999999997 99999999999998
Q ss_pred H
Q 045242 154 T 154 (243)
Q Consensus 154 ~ 154 (243)
.
T Consensus 313 a 313 (330)
T KOG1583|consen 313 A 313 (330)
T ss_pred H
Confidence 6
No 94
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=79.55 E-value=26 Score=28.29 Aligned_cols=100 Identities=15% Similarity=0.033 Sum_probs=58.3
Q ss_pred hhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCC-----CCCCccCcCCCCCCCC
Q 045242 106 TTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLP-----WTNHNYHQESTSNSSV 180 (243)
Q Consensus 106 a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 180 (243)
.....+..|+++++.++...+|+.+.. |+.++.+...|+....+++..+.... -...+.+...++....
T Consensus 7 ~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~ 80 (222)
T TIGR00803 7 HIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMF 80 (222)
T ss_pred hHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccc
Confidence 345567788999999998999998855 59999999999886543322110000 0000000000001112
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 045242 181 QSPIKGALMITIGCFSWAGFMVLQAITLKSY 211 (243)
Q Consensus 181 ~~~~~G~~~~llaal~~a~~~v~~k~~~~~~ 211 (243)
.+...|....+.+.++=+...+++.+..|+.
T Consensus 81 g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~ 111 (222)
T TIGR00803 81 GNPVVGLSAVLSALLSSGFAGVYFEKILKDG 111 (222)
T ss_pred ccHHHHHHHHHHHHHHHhhhHHHHHHcccCC
Confidence 3456677777777777777777777765543
No 95
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=79.18 E-value=21 Score=30.58 Aligned_cols=141 Identities=15% Similarity=0.214 Sum_probs=87.2
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHH----HHHHHhhcCC---CCCCCHHHHHHH
Q 045242 8 YIRAKPFLAVILLQFGYAGMSIFSKFALN-KGMSPHVFAVYRHAVATIVVA----PFALILDRKV---RPKMTLSIFVKI 79 (243)
Q Consensus 8 ~~~~~~~~~~~~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~r~~~~~i~l~----~~~~~~~~~~---~~~~~~~~~~~~ 79 (243)
++...|-++++.+.++-|.-+++=.+.+. .+.+|.+...+..+.+.+++. |+.+....+. .++-.+.+|...
T Consensus 172 s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~ 251 (372)
T KOG3912|consen 172 SSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDA 251 (372)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHH
Confidence 34567999999999999999998776653 468999999999988855543 3332221111 122334444422
Q ss_pred ---------HHHHHHHHHHHHHHHH-Hhh---cccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHH
Q 045242 80 ---------LLLGLLEPTIDQNLFY-TGM---KYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVT 146 (243)
Q Consensus 80 ---------~~~g~~~~~~~~~~~~-~~l---~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~ 146 (243)
+.....+......+++ .|+ ++.++++=.++-..--.+.=+++.....|+++..| +.|.++-
T Consensus 252 ~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llq------ilGFliL 325 (372)
T KOG3912|consen 252 FAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQ------ILGFLIL 325 (372)
T ss_pred HHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHH------HHHHHHH
Confidence 2222333222222222 222 33455555555554444444566667889999997 9999999
Q ss_pred HHHHHHHH
Q 045242 147 VGGAMFMT 154 (243)
Q Consensus 147 ~~Gv~l~~ 154 (243)
..|+++-.
T Consensus 326 i~Gi~lY~ 333 (372)
T KOG3912|consen 326 IMGIILYN 333 (372)
T ss_pred HHHHHHHH
Confidence 99998764
No 96
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=74.32 E-value=3.4 Score=34.74 Aligned_cols=135 Identities=15% Similarity=0.049 Sum_probs=85.9
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHH-HHHHHHHHHHHHH
Q 045242 9 IRAKPFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLS-IFVKILLLGLLEP 87 (243)
Q Consensus 9 ~~~~~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~ 87 (243)
+..+|=++++.++-++|.+.+.-.+.. ++.|..++...-.+.++++-..= .+.++++.....|. ....++. ..+..
T Consensus 163 np~~GD~lvi~GATlYaVSNv~EEflv-kn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~yl~-f~L~M 239 (336)
T KOG2766|consen 163 NPVKGDFLVIAGATLYAVSNVSEEFLV-KNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFLYLR-FALTM 239 (336)
T ss_pred CCccCcEEEEecceeeeeccccHHHHH-hcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHHHHH-HHHHH
Confidence 445777888999999999999999984 56999999999999988886653 34444444334442 1222222 22332
Q ss_pred HHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 88 TIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 88 ~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
++.+.+.=.-++..+++...+-.-+.-.|+.++ ..++-+++|.- .++.....+|.++-.
T Consensus 240 FllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY------~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 240 FLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLY------FLAFATIATGLIIYS 298 (336)
T ss_pred HHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhh------HHHHHHHHHhhEEee
Confidence 344444444455555555444444555666666 34455588875 788888888877663
No 97
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=69.91 E-value=29 Score=26.13 Aligned_cols=53 Identities=17% Similarity=0.008 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhcc
Q 045242 186 GALMITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIVALFLER 238 (243)
Q Consensus 186 G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (243)
..++++++..+-+.....+.++.++..||...+......|.+.+....++.++
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~ 54 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGR 54 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 35678899999999999999988887568999999999999999988887665
No 98
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.29 E-value=62 Score=24.89 Aligned_cols=56 Identities=13% Similarity=0.013 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhccC
Q 045242 184 IKGALMITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIVALFLERG 239 (243)
Q Consensus 184 ~~G~~~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (243)
....+.++++..+-+...-.+.++.+...+|.......+..|++.+..+.++.+..
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~ 59 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH 59 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 45678888999999999999999888876788999999999999999888875553
No 99
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=60.80 E-value=60 Score=23.36 Aligned_cols=30 Identities=10% Similarity=0.233 Sum_probs=22.5
Q ss_pred HHHHHHHhhccccccccccccchhHHHHHHHHHHHH
Q 045242 118 FLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFM 153 (243)
Q Consensus 118 ~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~ 153 (243)
+..+.+++||++++.. ..|.++.+.+++++
T Consensus 77 ~~Fsv~~l~E~l~~n~------l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNY------LWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHH------HHHHHHHHHhhhee
Confidence 4566789999999996 77777776665543
No 100
>PRK02237 hypothetical protein; Provisional
Probab=60.61 E-value=13 Score=26.76 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=28.9
Q ss_pred chhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 112 VLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 112 ~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
..-+.+.+-.+...++|++... ++|..++++|+.++.
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIM 104 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhe
Confidence 4445555666777788888776 999999999998885
No 101
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=58.35 E-value=12 Score=26.92 Aligned_cols=37 Identities=14% Similarity=0.304 Sum_probs=30.1
Q ss_pred chhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 112 VLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 112 ~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
..-+.+.+-.+.+.+++++... ++|..+|++|+.++.
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~D------~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRWD------WIGAAICLVGVAIIL 102 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChHH------HHhHHHHHHhHHheE
Confidence 4556666677788888888886 999999999999985
No 102
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=56.35 E-value=70 Score=26.89 Aligned_cols=68 Identities=13% Similarity=0.139 Sum_probs=36.1
Q ss_pred ccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCC--CCcchHHHHHHHHHHHHHHHHHHHHH
Q 045242 135 HSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSS--VQSPIKGALMITIGCFSWAGFMVLQA 205 (243)
Q Consensus 135 ~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~G~~~~llaal~~a~~~v~~k 205 (243)
+.++|++|.++++...++-...--|.+-..++++ .+.+.+.+.. -..+-.|+ .+.+.+-+.+|.+..|
T Consensus 177 ~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~~-~y~~as~~~ldYvFs~f~GI--fltSt~~F~~Y~~~~r 246 (254)
T PF07857_consen 177 PRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHPD-IYPGASQNGLDYVFSHFSGI--FLTSTVYFVIYCIIKR 246 (254)
T ss_pred cccchhHhHHHHHHHHHHHhcccchHHHHHhCcc-ccCCCCCcchheeHHHHhhH--HHHHHHHHHHHHHhhc
Confidence 4556899999988877776433233332222221 1111111111 12233444 4688888999998843
No 103
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=54.13 E-value=1.1e+02 Score=24.50 Aligned_cols=47 Identities=11% Similarity=0.163 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHHHHh
Q 045242 75 IFVKILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAWIIR 125 (243)
Q Consensus 75 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~ 125 (243)
.+++....+... .+.....+...+..|+...- .+.|....+++.+.+
T Consensus 145 ~~~k~~~~~~~~-~~~w~~~~~~~~~lp~~inp---~l~~~~~iiig~i~~ 191 (206)
T PF06570_consen 145 SWWKYILISVLA-MVLWIVIFVLTSFLPPVINP---VLPPWVYIIIGVIAF 191 (206)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHccccCCc---CCCHHHHHHHHHHHH
Confidence 344444444443 33334444444445554332 234555555554433
No 104
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=50.48 E-value=97 Score=24.23 Aligned_cols=52 Identities=12% Similarity=0.095 Sum_probs=32.8
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCchhHHHHHHHHHHHHHHHHH
Q 045242 181 QSPIKGALMITIGCFSWAGFMVLQAITLKS-----YPTELSLTALICLMGTIEGTIV 232 (243)
Q Consensus 181 ~~~~~G~~~~llaal~~a~~~v~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 232 (243)
.+..-....++.+++.|+...++-.-+-++ .|.|..-..+.+..+++.+..+
T Consensus 128 ~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaF 184 (193)
T COG4657 128 HNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAF 184 (193)
T ss_pred hhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHH
Confidence 334556788888999999888876554433 4445544555566666655543
No 105
>PF06168 DUF981: Protein of unknown function (DUF981); InterPro: IPR009324 This is a family of uncharacterised proteins found in bacteria and archaea.
Probab=47.79 E-value=1.5e+02 Score=23.87 Aligned_cols=109 Identities=12% Similarity=0.176 Sum_probs=60.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHH
Q 045242 39 MSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKIL-LLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFA 117 (243)
Q Consensus 39 ~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~ 117 (243)
+||.++...-...+.+...-......++++++-.+|.+...+ .+|++. ....++..-..-.|.+..-++....|++.
T Consensus 4 iD~L~~~L~~l~~~~~~~ay~~~~~~~~~~~~~~~~~~~~~f~~lG~~~--litGl~~~~TWPLPgsYNIlFgd~~~lfG 81 (191)
T PF06168_consen 4 IDPLTLMLFTLGAGLLLIAYYVYKNFRGGRKRSLNRSWAPFFGALGLFA--LITGLWGTFTWPLPGSYNILFGDPWLLFG 81 (191)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHhHHHHHHHHHHHH--HHHHHHheeeecCCCcccchHhhhHHHHH
Confidence 577777777666666665433333322221222233354444 555554 22333333334456677667777888887
Q ss_pred HHHHH--HHhhccccccccccccchhHHHHHHHHHHHHHHH
Q 045242 118 FLMAW--IIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLI 156 (243)
Q Consensus 118 ~il~~--~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~ 156 (243)
+++-. +....+.+. |..+....+.|+..+..+
T Consensus 82 v~lL~~~~~l~~~~~L-------~~~~~~~~flGl~~ivyg 115 (191)
T PF06168_consen 82 VLLLSAGLALYRGWDL-------RPLGIFALFLGLILIVYG 115 (191)
T ss_pred HHHHHHHHHHHcCchH-------HHHHHHHHHHHHHHHHHH
Confidence 66543 233333333 378888888888888643
No 106
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=47.78 E-value=1.5e+02 Score=23.87 Aligned_cols=117 Identities=9% Similarity=0.025 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 045242 13 PFLAVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQN 92 (243)
Q Consensus 13 ~~~~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 92 (243)
+.+..-+.+++-|.+..+.+.+ ..+.-......-..-++...+...+.++-+- -+-.+..+++.+...... .+-..
T Consensus 101 sLl~lg~~aLlsgitaff~~nA--~~~GlItlll~a~vgGfamy~my~y~yr~~a-d~sqr~~~~K~~lv~~~s-m~lWi 176 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKNA--QVYGLITLLLTAVVGGFAMYIMYYYAYRMRA-DNSQRPGTWKYLLVAVLS-MLLWI 176 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcCC--cchhHHHHHHHHHhhhHHHHHHHHHHHHhhc-ccccCCchHHHHHHHHHH-HHHHH
Confidence 3344444556667777776665 2344444444444444444443222221111 011112233444433333 23333
Q ss_pred HHHHhhcccChhhhhhhccchhHHHHHHHHHHhhcccccccccc
Q 045242 93 LFYTGMKYTTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKFHS 136 (243)
Q Consensus 93 ~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~~~ 136 (243)
..+.+-...|++..- .+.|+-..+.+.+.+.-|+..++|.|
T Consensus 177 ~v~i~t~~lPtslN~---~L~pi~l~IiGav~lalRfylkkk~N 217 (226)
T COG4858 177 AVMIATVFLPTSLNP---QLPPIALTIIGAVILALRFYLKKKKN 217 (226)
T ss_pred HHHHHHhhCCCcCCc---CCchHHHHHHHHHHHHHHHHHHHhhc
Confidence 333444445544322 34666666666655555555544333
No 107
>PF11168 DUF2955: Protein of unknown function (DUF2955); InterPro: IPR022604 Some members in this group of proteins with unknown function are annotated as membrane proteins. However, this cannot be confirmed.
Probab=43.93 E-value=1.4e+02 Score=22.48 Aligned_cols=22 Identities=23% Similarity=0.086 Sum_probs=13.7
Q ss_pred hccchhHHHHHHHHHHhhcccc
Q 045242 109 MANVLPAFAFLMAWIIRLEKVN 130 (243)
Q Consensus 109 i~~~~Pi~~~il~~~~~~e~~~ 130 (243)
+..-.|++..++...++..+..
T Consensus 19 ~~~~~p~~~pvf~~~lL~~~~~ 40 (140)
T PF11168_consen 19 FGWPLPFFAPVFPAILLGMVPP 40 (140)
T ss_pred HCCCchHHHHHHHHHHhcCCCC
Confidence 3345677777877777644333
No 108
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=38.04 E-value=1.3e+02 Score=21.92 Aligned_cols=12 Identities=17% Similarity=0.578 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHH
Q 045242 186 GALMITIGCFSW 197 (243)
Q Consensus 186 G~~~~llaal~~ 197 (243)
+..+.+++.+++
T Consensus 76 ~~~llilG~L~f 87 (115)
T PF05915_consen 76 GWALLILGILCF 87 (115)
T ss_pred cchHHHHHHHHH
Confidence 444555555554
No 109
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=37.28 E-value=56 Score=24.97 Aligned_cols=32 Identities=9% Similarity=0.237 Sum_probs=22.5
Q ss_pred ccChhhhhhhccchhHHHHHHHHHHhhcccccc
Q 045242 100 YTTATFTTAMANVLPAFAFLMAWIIRLEKVNFR 132 (243)
Q Consensus 100 ~~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~ 132 (243)
.-+.-.++.+.|+.|+++.+++.+.. +.+...
T Consensus 71 EkslL~sA~LvYi~PL~~l~v~~~La-~~L~~~ 102 (150)
T COG3086 71 EKSLLKSALLVYIFPLVGLFLGAILA-QYLFFS 102 (150)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHH-HHHhhh
Confidence 34556788899999999998887553 333334
No 110
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=36.12 E-value=48 Score=25.51 Aligned_cols=26 Identities=4% Similarity=0.056 Sum_probs=19.3
Q ss_pred ccChhhhhhhccchhHHHHHHHHHHh
Q 045242 100 YTTATFTTAMANVLPAFAFLMAWIIR 125 (243)
Q Consensus 100 ~~~~~~a~~i~~~~Pi~~~il~~~~~ 125 (243)
.-..-.++.+.|..|++..+.+..+.
T Consensus 71 e~~llkaa~lvYllPLl~li~ga~l~ 96 (154)
T PRK10862 71 EGSLLRSALLVYMTPLVGLFLGAALF 96 (154)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456688889999999888876554
No 111
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=35.27 E-value=13 Score=31.76 Aligned_cols=15 Identities=20% Similarity=0.465 Sum_probs=0.0
Q ss_pred CCcchHHHHHHHHHH
Q 045242 180 VQSPIKGALMITIGC 194 (243)
Q Consensus 180 ~~~~~~G~~~~llaa 194 (243)
++....|.++.+++.
T Consensus 102 GQ~LF~Gi~~l~l~~ 116 (381)
T PF05297_consen 102 GQTLFVGIVILFLCC 116 (381)
T ss_dssp ---------------
T ss_pred ccHHHHHHHHHHHHH
Confidence 344556765544443
No 112
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=34.95 E-value=2.1e+02 Score=21.97 Aligned_cols=114 Identities=11% Similarity=0.110 Sum_probs=61.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhh-
Q 045242 39 MSPHVFAVYRHAVATIVVAPFALILDRKV------------RPKMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTTATF- 105 (243)
Q Consensus 39 ~~~~~~~~~r~~~~~i~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~- 105 (243)
++|.++...-++.-....+.+ ..++.+ .+-.+++.+......|..........++.....-+...
T Consensus 4 l~~~qiL~inli~d~~~a~al--~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~~ 81 (182)
T PF00689_consen 4 LTPIQILWINLITDLLPALAL--GFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDEE 81 (182)
T ss_dssp S-HHHHHHHHHTTTHHHHHHG--GGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSSH
T ss_pred CcHHHHHHHHHHHHHHHHHHH--hcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 456666666665544433322 222211 12267778888888888887777777777776322221
Q ss_pred --------hhhhccchhHHHHHHHHHHhhc-c---cc-ccccccccchhHHHHHHHHHHHHH
Q 045242 106 --------TTAMANVLPAFAFLMAWIIRLE-K---VN-FRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 106 --------a~~i~~~~Pi~~~il~~~~~~e-~---~~-~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
+.......=++.-+.-.+..++ + .+ ...+.|+.-+.+++.+++..+++.
T Consensus 82 ~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~ 143 (182)
T PF00689_consen 82 TNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIV 143 (182)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHh
Confidence 3333333333333333333333 1 11 112456777777777777777775
No 113
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=33.95 E-value=2.5e+02 Score=22.53 Aligned_cols=23 Identities=22% Similarity=0.242 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 045242 184 IKGALMITIGCFSWAGFMVLQAI 206 (243)
Q Consensus 184 ~~G~~~~llaal~~a~~~v~~k~ 206 (243)
..+....++|+++++....+.||
T Consensus 178 l~~~~~iiig~i~~~~~~~lkkk 200 (206)
T PF06570_consen 178 LPPWVYIIIGVIAFALRFYLKKK 200 (206)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Confidence 44677778888888888777555
No 114
>PF09945 DUF2177: Predicted membrane protein (DUF2177); InterPro: IPR018687 This family of putative membrane proteins has no known function.
Probab=33.19 E-value=1.9e+02 Score=21.63 Aligned_cols=42 Identities=24% Similarity=0.387 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 045242 189 MITIGCFSWAGFMVLQAITLKSYPTELSLTALICLMGTIEGTIV 232 (243)
Q Consensus 189 ~~llaal~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (243)
=++++.++|+.|...+....|+.| ..++..=...|++.+...
T Consensus 80 GallGl~~YgtYdlTN~Atlk~W~--~~~~liD~~WG~~lt~~s 121 (128)
T PF09945_consen 80 GALLGLFAYGTYDLTNLATLKDWP--LKVTLIDIAWGTFLTALS 121 (128)
T ss_pred HHHHHHHHHHHHHHHhHHHHCCCC--ccHHHHHHhHHHHHHHHH
Confidence 346788999999999999999985 445555555555554433
No 115
>PRK11715 inner membrane protein; Provisional
Probab=32.40 E-value=3.5e+02 Score=24.75 Aligned_cols=14 Identities=14% Similarity=0.074 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHHH
Q 045242 186 GALMITIGCFSWAG 199 (243)
Q Consensus 186 G~~~~llaal~~a~ 199 (243)
|..++..=+..|+.
T Consensus 386 g~~~~~~L~~LYg~ 399 (436)
T PRK11715 386 GLLFAAALAALYGV 399 (436)
T ss_pred HHHHHHHHHHHHHH
Confidence 44443333334444
No 116
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=31.41 E-value=47 Score=24.68 Aligned_cols=25 Identities=12% Similarity=0.270 Sum_probs=19.1
Q ss_pred cChhhhhhhccchhHHHHHHHHHHh
Q 045242 101 TTATFTTAMANVLPAFAFLMAWIIR 125 (243)
Q Consensus 101 ~~~~~a~~i~~~~Pi~~~il~~~~~ 125 (243)
.....++++.|..|++..+++.++.
T Consensus 65 ~~~~~aa~l~Y~lPll~li~g~~l~ 89 (135)
T PF04246_consen 65 SSLLKAAFLVYLLPLLALIAGAVLG 89 (135)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455688899999999988887554
No 117
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=28.73 E-value=34 Score=24.53 Aligned_cols=37 Identities=14% Similarity=0.272 Sum_probs=27.1
Q ss_pred chhHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 045242 112 VLPAFAFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 112 ~~Pi~~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
..-+.+.+-.++..+.+++... ++|..+|++|+.++.
T Consensus 67 vyI~~sL~W~~~Vdg~~pdr~D------~~Ga~icl~G~~vil 103 (109)
T COG1742 67 VYIAASLAWLWVVDGVRPDRYD------WIGAAICLAGVAVIL 103 (109)
T ss_pred hHHHHHHHHHHHHcCcCCcHHH------hhhHHHHHhceeeeE
Confidence 4445555556666666777665 999999999988775
No 118
>COG5202 Predicted membrane protein [Function unknown]
Probab=27.81 E-value=4.4e+02 Score=23.55 Aligned_cols=160 Identities=14% Similarity=0.184 Sum_probs=79.6
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHH
Q 045242 37 KGMSPHVFAVYRHAVATIVVAPFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAF 116 (243)
Q Consensus 37 ~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~ 116 (243)
.++++.+. |+++..+.-.|+.-+.+|. ..+++.+.... ..++ .++..|+.++ .....+.....++
T Consensus 16 ~gv~~~~l---r~l~clL~t~pf~~ilkR~-p~~~~~~nlfs-isl~--------lfylfgv~hl--~~g~~iL~~~slf 80 (512)
T COG5202 16 SGVNYLEL---RFLACLLLTLPFVSILKRN-PTRIRTHNLFS-ISLI--------LFYLFGVRHL--VSGAYILASISLF 80 (512)
T ss_pred cCCCHHHH---HHHHHHHHhhhHHHHHhhC-ccccchhhHHH-HHHH--------HHHHHhhHhh--hhhHHHHHHHHHH
Confidence 36888774 7777777778877766543 22333332211 1111 2234455443 2333444556778
Q ss_pred HHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHH
Q 045242 117 AFLMAWIIRLEKVNFRKFHSWAKVFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFS 196 (243)
Q Consensus 117 ~~il~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~ 196 (243)
|.+++.+.......+. ..+.+.|...+.-... ...++ .+.+.+-....-++.+=+.++.
T Consensus 81 Tyl~~~fyrS~~Mp~v----------~fivilgh~~i~h~~q---------~~~e~--~~ts~DIt~sqMvl~mKltsfa 139 (512)
T COG5202 81 TYLLRYFYRSAYMPTV----------LFIVILGHYKIFHAAQ---------LFEER--ISTSFDITGSQMVLTMKLTSFA 139 (512)
T ss_pred HHHHHHHHHhhhhhHH----------HHHHHHHHHHHHHHHH---------Hhhhh--ccCcccchHHHHHHHHHHHHhH
Confidence 8888776554433322 2334455554430000 00111 1111122223345566678888
Q ss_pred HHHHHHH---------HH-HHHhcCCchhHHHHHHHHHHHHHHHHH
Q 045242 197 WAGFMVL---------QA-ITLKSYPTELSLTALICLMGTIEGTIV 232 (243)
Q Consensus 197 ~a~~~v~---------~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (243)
|+.|.-- +| |..++.|+..-.+.|.+++.++...|.
T Consensus 140 ws~YdG~~~ssdlt~~qk~ra~r~~p~vl~fL~YifF~p~Ll~GPa 185 (512)
T COG5202 140 WSYYDGKEYSSDLTEHQKSRARRGTPTVLDFLSYIFFIPGLLLGPA 185 (512)
T ss_pred HHhhcCCCccchhhhhhhhhhhcCCCcHHHHHHHHHHhhhhhcCCC
Confidence 8887421 11 123345556667778777777776664
No 119
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=27.46 E-value=1.6e+02 Score=18.32 Aligned_cols=44 Identities=25% Similarity=0.400 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 045242 140 VFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKS 210 (243)
Q Consensus 140 ~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~ 210 (243)
..|.++.++|++++. .++ .|.+..+++-..+|...-..|+..+.
T Consensus 6 v~G~~lv~~Gii~~~-lPG--------------------------pG~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 6 VLGWVLVVAGIIMLP-LPG--------------------------PGLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hHHHHHHHHHHHhhc-CCC--------------------------CcHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 788899999999885 111 26777778888888888877776654
No 120
>COG2246 Predicted membrane protein [Function unknown]
Probab=27.18 E-value=2.7e+02 Score=20.89 Aligned_cols=60 Identities=20% Similarity=0.252 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhcc--cChhhhhhhccchhHHHHHHHHHHhhcccccccc
Q 045242 71 MTLSIFVKILLLGLLEPTIDQNLFYTGMKY--TTATFTTAMANVLPAFAFLMAWIIRLEKVNFRKF 134 (243)
Q Consensus 71 ~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~--~~~~~a~~i~~~~Pi~~~il~~~~~~e~~~~~~~ 134 (243)
...+...++...|..++..+...+....+. .+...+.++.+ -+.++..++.+++.+.++|
T Consensus 8 ~~~~~~lrF~~VG~~~t~V~~~~~~ll~~~~~~~~~~A~~~a~----~~~ii~sf~~N~~wTF~~~ 69 (139)
T COG2246 8 FTLSRLLRFAIVGGLGTLVDFAVLWLLVKALGVPYALANAIAY----EAAIIFSFVLNRRWTFRDR 69 (139)
T ss_pred hHHHHHHHHHhcchHHHHHHHHHHHHHHHhcccchHHHHHHHH----HHHHHHHHHHHceeeEeec
Confidence 345668899999999988888877777763 44444544433 3344445567777777765
No 121
>PF13127 DUF3955: Protein of unknown function (DUF3955)
Probab=26.97 E-value=1.8e+02 Score=18.72 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=33.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcC--Cchh--HHHHHHHHHHHHHHHHHHH
Q 045242 183 PIKGALMITIGCFSWAGFMVLQAITLKSY--PTEL--SLTALICLMGTIEGTIVAL 234 (243)
Q Consensus 183 ~~~G~~~~llaal~~a~~~v~~k~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~ 234 (243)
...+..+.+++.+|+..++....++.++- ..|. ....|.+...++..+....
T Consensus 4 ~~l~~~~~llg~~~l~i~~~~~syVd~~G~L~EpFfLiPlg~l~~~~g~~~~i~~~ 59 (63)
T PF13127_consen 4 YILSLILLLLGVVCLFIFNIIGSYVDEDGVLHEPFFLIPLGYLFLLIGIISLIIYL 59 (63)
T ss_pred hHHHHHHHHHHHHHHHHHhcccceECCCCeEecccHHHHHHHHHHHHHHHHHHHHH
Confidence 35788899999999999999877765541 1233 3444555555555544443
No 122
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=26.16 E-value=3.2e+02 Score=21.34 Aligned_cols=9 Identities=11% Similarity=0.423 Sum_probs=4.0
Q ss_pred hhhhccchh
Q 045242 106 TTAMANVLP 114 (243)
Q Consensus 106 a~~i~~~~P 114 (243)
.....+..|
T Consensus 60 ~~~~~~~~P 68 (194)
T PF07698_consen 60 ISYFPYLIP 68 (194)
T ss_pred chhhhhhhH
Confidence 333444454
No 123
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=25.48 E-value=3e+02 Score=20.81 Aligned_cols=31 Identities=13% Similarity=0.194 Sum_probs=25.3
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 045242 180 VQSPIKGALMITIGCFSWAGFMVLQAITLKS 210 (243)
Q Consensus 180 ~~~~~~G~~~~llaal~~a~~~v~~k~~~~~ 210 (243)
+.+...+.+..++++..|.-|...+||+.+.
T Consensus 116 d~~~i~~l~~~li~a~IwipYf~~S~RVK~T 146 (149)
T PF10754_consen 116 DAEAIRELLRSLIAAAIWIPYFLRSKRVKNT 146 (149)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHhhhh
Confidence 3455678899999999999999999986543
No 124
>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only]
Probab=25.04 E-value=4e+02 Score=22.05 Aligned_cols=114 Identities=11% Similarity=0.131 Sum_probs=61.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccChhhhhhhccchhHHHHHHHH-HHhhccccccccccccchhHHHHHHH
Q 045242 70 KMTLSIFVKILLLGLLEPTIDQNLFYTGMKYTTATFTTAMANVLPAFAFLMAW-IIRLEKVNFRKFHSWAKVFGTIVTVG 148 (243)
Q Consensus 70 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~~i~~~~Pi~~~il~~-~~~~e~~~~~~~~~~~~~~g~~l~~~ 148 (243)
..+..........++.|..+......+.-+.-+......+..+.-++...-.. ...|+.++.. .-....++.
T Consensus 82 s~~~~~~~~~~~t~l~G~tL~~i~~~Y~~~~~~~~i~~af~~t~~~F~~ls~~g~~tk~Dls~l-------~~~l~~ali 154 (233)
T COG0670 82 SSPTALILFFVYTALVGLTLSPILLVYAAISGGDAIAAAFGITALVFGALSLYGYTTKRDLSSL-------GSFLFMALI 154 (233)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-------HHHHHHHHH
Confidence 34445556667777777777777777776654533444444444444433322 2333444443 222333333
Q ss_pred HHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 045242 149 GAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAGFMVLQAITLKS 210 (243)
Q Consensus 149 Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~~~v~~k~~~~~ 210 (243)
|+++..+- +-.-+..........++++.++.+..+.....++
T Consensus 155 gLiiasvv--------------------n~Fl~s~~l~~~IS~lgvlifsgli~yDtq~I~~ 196 (233)
T COG0670 155 GLIIASLV--------------------NIFLGSSALHLAISVLGVLIFSGLIAYDTQNIKR 196 (233)
T ss_pred HHHHHHHH--------------------HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333210 0011223677888889999999988887655555
No 125
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=24.42 E-value=3.7e+02 Score=21.51 Aligned_cols=45 Identities=20% Similarity=0.336 Sum_probs=32.4
Q ss_pred ccchhHHHHHHHHHHhhcccccc-------ccccccchhHHHHHHHHHHHHH
Q 045242 110 ANVLPAFAFLMAWIIRLEKVNFR-------KFHSWAKVFGTIVTVGGAMFMT 154 (243)
Q Consensus 110 ~~~~Pi~~~il~~~~~~e~~~~~-------~~~~~~~~~g~~l~~~Gv~l~~ 154 (243)
....|....++.+...+||.... -+.+..+..+.++.++|++++.
T Consensus 159 i~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~~~~~i~~~i~~i~G~~l~~ 210 (214)
T PF11139_consen 159 IASLPALLPLLAYLVAPERAEPWLERLRSWLRRHSRQILAVILLIVGALLLG 210 (214)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 35678888888888888776332 1334556788888999998885
No 126
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=24.25 E-value=3.7e+02 Score=22.94 Aligned_cols=42 Identities=14% Similarity=0.161 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHHHHHHHhCCccCCCCCCCccCcCCCCCCCCCcchHHHHHHHHHHHHHHH
Q 045242 140 VFGTIVTVGGAMFMTLIKGPVLDLPWTNHNYHQESTSNSSVQSPIKGALMITIGCFSWAG 199 (243)
Q Consensus 140 ~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~llaal~~a~ 199 (243)
+.+.+++..|+.... ..-+ ...+.....|.++..++.+.|..
T Consensus 7 ~f~~~mGtg~l~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~ 48 (330)
T PF03595_consen 7 WFGMVMGTGGLSNLL-YLLP-----------------YHFGGLAILSEVLFILALILFLV 48 (330)
T ss_dssp GGHHHHHHHHHHHHH-HTTT-----------------TTSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHH-----------------HhccchhHHHHHHHHHHHHHHHH
Confidence 888888888888885 2211 11234556777777777777666
No 127
>PRK12671 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=23.30 E-value=3.1e+02 Score=20.22 Aligned_cols=16 Identities=25% Similarity=0.084 Sum_probs=10.4
Q ss_pred chHHHHHHHHHHHHHH
Q 045242 183 PIKGALMITIGCFSWA 198 (243)
Q Consensus 183 ~~~G~~~~llaal~~a 198 (243)
...|..+.+++...|.
T Consensus 50 ~TlG~~liL~g~~l~~ 65 (120)
T PRK12671 50 TSWGAGGILIASILYF 65 (120)
T ss_pred hhhhHHHHHHHHHHHh
Confidence 4567777777766543
No 128
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.02 E-value=4.3e+02 Score=23.63 Aligned_cols=82 Identities=11% Similarity=0.075 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHH---HHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 045242 23 GYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVA---PFALILDRKVRPKMTLSIFVKILLLGLLEPTIDQNLFYTGMK 99 (243)
Q Consensus 23 ~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~ 99 (243)
.|+.+..+.+.+.+ +...+...-....++-++.. -++..+++......+.+++....+. .++-.+.|.|++
T Consensus 200 gWs~slY~i~ql~~-nLq~Iwieyr~yvLgYvlivgliSfaVCYK~GPp~d~RS~~ilmWtLq-----li~lvl~Yfsvq 273 (452)
T KOG3817|consen 200 GWSISLYVIKQLAD-NLQLIWIEYRDYVLGYVLIVGLISFAVCYKIGPPKDPRSQTILMWTLQ-----LIGLVLAYFSVQ 273 (452)
T ss_pred cchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcchhhHHHHHHH-----HHHHHHHHHhcc
Confidence 47777777777643 36566655555555433322 2233333332223333333333332 345556678888
Q ss_pred ccChhhhhhhc
Q 045242 100 YTTATFTTAMA 110 (243)
Q Consensus 100 ~~~~~~a~~i~ 110 (243)
+..++.|.++.
T Consensus 274 ~p~~a~A~iI~ 284 (452)
T KOG3817|consen 274 HPSAAIAAIIM 284 (452)
T ss_pred cHHHHHHHHHH
Confidence 88877765543
No 129
>CHL00196 psbY photosystem II protein Y; Provisional
Probab=22.88 E-value=1.6e+02 Score=16.74 Aligned_cols=22 Identities=18% Similarity=0.181 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 045242 184 IKGALMITIGCFSWAGFMVLQA 205 (243)
Q Consensus 184 ~~G~~~~llaal~~a~~~v~~k 205 (243)
..=++.-++.+.+|+.|++...
T Consensus 5 lliVl~Pil~A~~Wa~fNIg~~ 26 (36)
T CHL00196 5 LLVIAAPVLAAASWALFNIGRL 26 (36)
T ss_pred HHHHHHHHHHHHHHHHHHhHHH
Confidence 3456778899999999999743
No 130
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=21.93 E-value=1.3e+02 Score=25.86 Aligned_cols=31 Identities=16% Similarity=0.017 Sum_probs=26.6
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 045242 181 QSPIKGALMITIGCFSWAGFMVLQAITLKSY 211 (243)
Q Consensus 181 ~~~~~G~~~~llaal~~a~~~v~~k~~~~~~ 211 (243)
.++..|..+++.++++.+....++|+-.++.
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~ 33 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRL 33 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567899999999999999999999866554
No 131
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion. The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].
Probab=21.88 E-value=1.6e+02 Score=23.16 Aligned_cols=17 Identities=18% Similarity=0.514 Sum_probs=11.3
Q ss_pred hhHHHHHHHHHHHHHHH
Q 045242 140 VFGTIVTVGGAMFMTLI 156 (243)
Q Consensus 140 ~~g~~l~~~Gv~l~~~~ 156 (243)
+.|+++...|+..+++.
T Consensus 13 ilgilli~~gI~~Lv~~ 29 (191)
T PF04156_consen 13 ILGILLIASGIAALVLF 29 (191)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66677777777776543
No 132
>PRK12592 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=20.30 E-value=3.7e+02 Score=19.98 Aligned_cols=16 Identities=13% Similarity=0.368 Sum_probs=11.2
Q ss_pred chHHHHHHHHHHHHHH
Q 045242 183 PIKGALMITIGCFSWA 198 (243)
Q Consensus 183 ~~~G~~~~llaal~~a 198 (243)
...|..+.+++...+.
T Consensus 46 ~TlG~~liLlg~~l~~ 61 (126)
T PRK12592 46 QTTGLILTVVGAIIRV 61 (126)
T ss_pred hhHHHHHHHHHHHHHH
Confidence 4577777777777764
No 133
>PF12292 DUF3624: Protein of unknown function (DUF3624); InterPro: IPR022072 This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.
Probab=20.01 E-value=2.9e+02 Score=18.64 Aligned_cols=44 Identities=7% Similarity=0.120 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHH
Q 045242 16 AVILLQFGYAGMSIFSKFALNKGMSPHVFAVYRHAVATIVVAPFA 60 (243)
Q Consensus 16 ~~~~a~~~~a~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~ 60 (243)
+.+++.+.|..-+.+-+-- ...+.++.+.+.-+..++++++-+.
T Consensus 25 LtvLs~~~w~iWw~~f~d~-P~sieSIALl~~~~AfsgLL~lHLv 68 (77)
T PF12292_consen 25 LTVLSVLSWPIWWFFFRDT-PTSIESIALLFFCFAFSGLLFLHLV 68 (77)
T ss_pred HHHHHHHHHHHHHHHHcCC-cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667777777777766654 3456677777777777777666543
Done!