Query 045244
Match_columns 93
No_of_seqs 67 out of 69
Neff 3.0
Searched_HMMs 29240
Date Mon Mar 25 19:53:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045244.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045244hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jee_A YIIU; FTSZ, septum, coi 91.8 0.87 3E-05 30.1 7.0 55 6-60 11-65 (81)
2 3cvf_A Homer-3, homer protein 88.5 0.7 2.4E-05 30.3 4.4 50 11-60 9-58 (79)
3 2dgc_A Protein (GCN4); basic d 88.2 0.87 3E-05 28.0 4.5 33 29-61 30-62 (63)
4 2j5u_A MREC protein; bacterial 86.3 0.94 3.2E-05 33.8 4.5 38 19-60 23-60 (255)
5 2jo8_A Serine/threonine-protei 85.1 2.1 7.3E-05 26.2 4.9 32 23-64 11-42 (51)
6 1hjb_A Ccaat/enhancer binding 84.6 2.2 7.6E-05 28.0 5.3 37 25-61 39-75 (87)
7 3cve_A Homer protein homolog 1 84.2 2.2 7.4E-05 27.5 5.0 43 18-60 10-52 (72)
8 2wt7_A Proto-oncogene protein 81.6 5.2 0.00018 24.1 5.8 30 30-59 24-53 (63)
9 2xdj_A Uncharacterized protein 81.5 6.1 0.00021 25.6 6.4 55 4-58 2-56 (83)
10 1t2k_D Cyclic-AMP-dependent tr 80.7 6.1 0.00021 23.5 5.8 33 28-60 21-53 (61)
11 1gu4_A CAAT/enhancer binding p 78.7 2.3 7.9E-05 27.4 3.6 33 27-59 41-73 (78)
12 3ra3_A P1C; coiled coil domain 75.8 1.2 4E-05 24.5 1.3 19 19-37 4-22 (28)
13 2oxj_A Hybrid alpha/beta pepti 74.7 2.8 9.5E-05 24.0 2.8 18 43-60 15-32 (34)
14 3m48_A General control protein 74.4 1.4 4.8E-05 25.1 1.5 18 44-61 15-32 (33)
15 2wt7_A Proto-oncogene protein 73.5 5.4 0.00018 24.0 4.1 25 10-34 25-49 (63)
16 1jnm_A Proto-oncogene C-JUN; B 72.1 11 0.00038 22.4 5.2 31 28-58 21-51 (62)
17 2jee_A YIIU; FTSZ, septum, coi 71.0 19 0.00063 23.6 6.5 52 10-61 22-77 (81)
18 3i00_A HIP-I, huntingtin-inter 68.8 3.8 0.00013 28.2 2.9 18 41-58 13-30 (120)
19 1uii_A Geminin; human, DNA rep 67.9 11 0.00039 24.9 5.0 35 22-63 46-80 (83)
20 1ci6_A Transcription factor AT 66.8 18 0.00063 21.8 5.8 20 13-32 28-47 (63)
21 1gd2_E Transcription factor PA 65.5 2.9 0.0001 26.4 1.7 30 6-35 34-63 (70)
22 1dh3_A Transcription factor CR 65.1 6.1 0.00021 23.5 3.0 30 30-59 23-52 (55)
23 1ci6_A Transcription factor AT 63.7 21 0.00071 21.5 5.3 30 29-58 23-52 (63)
24 3m9b_A Proteasome-associated A 58.8 13 0.00043 28.8 4.5 31 26-57 58-89 (251)
25 3a7p_A Autophagy protein 16; c 58.4 30 0.001 25.0 6.1 51 15-65 68-118 (152)
26 1zxa_A CGMP-dependent protein 57.8 14 0.00046 23.5 3.8 32 29-60 25-56 (67)
27 1gu4_A CAAT/enhancer binding p 57.2 25 0.00087 22.4 5.1 31 28-58 35-65 (78)
28 2oa5_A Hypothetical protein BQ 56.7 2.6 9E-05 29.3 0.3 20 13-32 13-32 (110)
29 3vmx_A Voltage-gated hydrogen 55.5 32 0.0011 20.8 6.2 36 19-61 8-43 (48)
30 3c3g_A Alpha/beta peptide with 54.6 8.5 0.00029 21.8 2.2 17 44-60 15-31 (33)
31 1hjb_A Ccaat/enhancer binding 54.1 41 0.0014 21.9 5.8 34 28-61 35-68 (87)
32 4etp_A Kinesin-like protein KA 54.0 29 0.001 27.3 5.9 6 56-61 48-53 (403)
33 1uo4_A General control protein 54.0 6 0.00021 22.6 1.5 18 44-61 16-33 (34)
34 3c3f_A Alpha/beta peptide with 53.5 9 0.00031 21.9 2.2 17 44-60 16-32 (34)
35 3m9b_A Proteasome-associated A 52.6 27 0.00093 26.9 5.4 29 30-58 55-83 (251)
36 2f1m_A Acriflavine resistance 51.1 21 0.0007 25.1 4.2 45 15-59 46-90 (277)
37 4emc_A Monopolin complex subun 50.3 52 0.0018 24.6 6.5 30 9-38 28-57 (190)
38 3cl3_D NF-kappa-B essential mo 48.7 46 0.0016 23.6 5.7 43 19-61 52-94 (130)
39 4dzn_A Coiled-coil peptide CC- 48.3 35 0.0012 19.1 5.1 28 25-59 5-32 (33)
40 1wlq_A Geminin; coiled-coil; 2 47.9 40 0.0014 22.3 5.0 33 22-61 38-70 (83)
41 2wt7_B Transcription factor MA 47.8 33 0.0011 22.7 4.6 37 17-60 50-86 (90)
42 1go4_E MAD1 (mitotic arrest de 47.3 62 0.0021 21.7 6.0 50 9-58 13-90 (100)
43 3oja_B Anopheles plasmodium-re 47.1 85 0.0029 24.3 7.5 9 48-56 563-571 (597)
44 1kd8_B GABH BLL, GCN4 acid bas 44.4 23 0.00078 20.4 2.9 17 45-61 17-33 (36)
45 3a7o_A Autophagy protein 16; c 43.8 9.1 0.00031 25.1 1.3 28 10-37 48-75 (75)
46 3swk_A Vimentin; cytoskeleton, 43.7 60 0.0021 20.6 5.9 37 25-61 3-39 (86)
47 1am9_A Srebp-1A, protein (ster 42.9 16 0.00055 22.8 2.4 11 3-13 42-52 (82)
48 3u06_A Protein claret segregat 42.4 44 0.0015 26.5 5.3 18 19-36 7-24 (412)
49 3he5_A Synzip1; heterodimeric 41.7 56 0.0019 19.6 4.9 40 12-58 7-46 (49)
50 2bni_A General control protein 41.6 15 0.00051 20.9 1.8 17 44-60 16-32 (34)
51 2yy0_A C-MYC-binding protein; 41.4 12 0.0004 22.3 1.5 16 20-35 24-39 (53)
52 2w83_C C-JUN-amino-terminal ki 40.6 15 0.00052 24.1 2.0 17 44-60 45-61 (77)
53 2wvr_A Geminin; DNA replicatio 39.4 51 0.0017 25.1 5.0 34 22-62 115-148 (209)
54 2e50_A Protein SET; histone ch 39.3 92 0.0031 22.8 6.3 44 19-62 20-63 (225)
55 2zvf_A Alanyl-tRNA synthetase; 38.9 83 0.0028 20.8 6.7 50 11-67 14-63 (171)
56 2xdj_A Uncharacterized protein 38.7 76 0.0026 20.3 5.7 35 27-61 4-45 (83)
57 2hy6_A General control protein 38.5 30 0.001 19.7 2.8 17 44-60 16-32 (34)
58 2lw9_A Unconventionnal myosin- 37.5 26 0.00088 21.5 2.6 16 47-62 10-25 (51)
59 3fs3_A Nucleosome assembly pro 37.2 1E+02 0.0035 24.7 6.7 37 25-61 49-85 (359)
60 1nkp_A C-MYC, MYC proto-oncoge 36.6 67 0.0023 20.3 4.6 13 43-55 73-85 (88)
61 3bbp_D GRIP and coiled-coil do 36.0 21 0.00071 23.2 2.1 15 42-56 49-63 (71)
62 2cly_C ATP synthase coupling f 35.9 23 0.0008 23.1 2.3 17 44-60 36-52 (77)
63 4emc_A Monopolin complex subun 35.8 38 0.0013 25.3 3.8 34 19-59 24-57 (190)
64 4etp_A Kinesin-like protein KA 33.8 1.3E+02 0.0046 23.5 6.8 50 6-55 8-57 (403)
65 4ath_A MITF, microphthalmia-as 33.4 37 0.0013 22.2 3.0 35 3-37 31-78 (83)
66 1kd8_A GABH AIV, GCN4 acid bas 33.0 44 0.0015 19.1 2.9 17 44-60 16-32 (36)
67 4b4t_K 26S protease regulatory 33.0 58 0.002 25.8 4.6 52 17-68 37-90 (428)
68 2v4h_A NF-kappa-B essential mo 32.9 90 0.0031 21.5 5.0 37 21-57 23-59 (110)
69 2wq1_A General control protein 31.5 38 0.0013 19.1 2.4 15 45-59 16-30 (33)
70 1p9i_A Cortexillin I/GCN4 hybr 31.0 21 0.00071 19.8 1.3 16 19-34 10-25 (31)
71 3kqg_A Langerin, C-type lectin 30.4 83 0.0028 20.4 4.4 39 20-62 4-42 (182)
72 3ra3_B P2F; coiled coil domain 29.6 28 0.00096 18.9 1.6 13 23-35 8-20 (28)
73 3jsv_C NF-kappa-B essential mo 29.0 1.3E+02 0.0045 20.1 6.1 35 25-59 5-39 (94)
74 1deb_A APC protein, adenomatou 28.7 1.1E+02 0.0036 18.9 5.2 42 11-59 6-47 (54)
75 3s4r_A Vimentin; alpha-helix, 27.3 1.3E+02 0.0043 19.3 5.6 41 9-58 24-64 (93)
76 3hnw_A Uncharacterized protein 26.8 1.5E+02 0.0052 20.2 5.4 28 33-60 93-120 (138)
77 2oto_A M protein; helical coil 26.6 1.3E+02 0.0044 20.3 5.0 19 17-35 24-42 (155)
78 2js5_A Uncharacterized protein 26.6 52 0.0018 21.1 2.8 18 45-62 5-22 (71)
79 2wpq_A Trimeric autotransporte 25.8 1.6E+02 0.0054 20.0 5.4 33 26-58 66-98 (99)
80 3u06_A Protein claret segregat 25.5 2.1E+02 0.0073 22.5 6.7 35 2-36 4-38 (412)
81 1nlw_A MAD protein, MAX dimeri 24.9 1.2E+02 0.0041 18.8 4.3 11 46-56 64-74 (80)
82 1dip_A Delta-sleep-inducing pe 24.8 31 0.0011 22.7 1.5 45 20-71 13-57 (78)
83 1c94_A Retro-GCN4 leucine zipp 24.3 26 0.0009 20.1 0.9 28 30-57 10-37 (38)
84 2wuj_A Septum site-determining 23.5 89 0.003 18.3 3.3 15 20-34 39-53 (57)
85 1rtm_1 Mannose-binding protein 23.4 95 0.0032 19.6 3.6 25 26-57 1-25 (149)
86 3ol1_A Vimentin; structural ge 23.4 1.6E+02 0.0056 19.3 5.9 34 26-59 24-57 (119)
87 2ocy_A RAB guanine nucleotide 23.2 1.6E+02 0.0056 20.9 5.1 56 2-59 87-145 (154)
88 1nkp_B MAX protein, MYC proto- 22.9 1.2E+02 0.0041 18.4 3.9 11 46-56 64-74 (83)
89 4ati_A MITF, microphthalmia-as 22.8 27 0.00092 23.3 0.9 36 3-38 66-114 (118)
90 2wt7_B Transcription factor MA 22.5 30 0.001 22.9 1.1 32 3-34 57-88 (90)
91 2ayu_A Nucleosome assembly pro 21.7 2.7E+02 0.0092 22.5 6.7 40 23-62 88-127 (417)
92 2r2v_A GCN4 leucine zipper; co 21.1 91 0.0031 17.6 2.8 16 45-60 17-32 (34)
93 3efg_A Protein SLYX homolog; x 21.0 1.6E+02 0.0055 18.4 5.9 30 20-49 5-34 (78)
94 1got_G GT-gamma; complex (GTP- 20.5 58 0.002 20.5 2.1 12 46-57 20-31 (73)
95 3tq2_A KE1; parallel three hel 20.1 67 0.0023 18.2 2.1 32 3-34 3-34 (36)
No 1
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=91.77 E-value=0.87 Score=30.08 Aligned_cols=55 Identities=24% Similarity=0.291 Sum_probs=41.1
Q ss_pred hhhHHHHHhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 6 LSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYH 60 (93)
Q Consensus 6 LSaqv~~L~qq~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~ 60 (93)
|-++|.-.-.--..|-||..+||.+-.+|+++.---....+.|.+|+++||.-..
T Consensus 11 LE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~ 65 (81)
T 2jee_A 11 LEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQN 65 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3344444444556788999999999999999988877777778888887776544
No 2
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=88.53 E-value=0.7 Score=30.27 Aligned_cols=50 Identities=18% Similarity=0.201 Sum_probs=38.3
Q ss_pred HHHhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 11 AFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYH 60 (93)
Q Consensus 11 ~~L~qq~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~ 60 (93)
..+.+.-=.+-++|..|+.|+..++++--=....++.++.|+.++-....
T Consensus 9 e~~~~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld 58 (79)
T 3cvf_A 9 EETQQKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRAAQLLD 58 (79)
T ss_dssp -CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444444567889999999999999877677779999999999866544
No 3
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=88.18 E-value=0.87 Score=28.02 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 29 QRIAALAQDKIFKDAHQEALKREIQRLRQVYHQ 61 (93)
Q Consensus 29 qRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~Q 61 (93)
.++..|+...---...|..|+.||.+||..++|
T Consensus 30 ~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l~~ 62 (63)
T 2dgc_A 30 QRMKQLEDKVEELLSKNYHLENEVARLKKLVGE 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456666666655567889999999999987764
No 4
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=86.27 E-value=0.94 Score=33.75 Aligned_cols=38 Identities=29% Similarity=0.372 Sum_probs=29.7
Q ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 19 LLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYH 60 (93)
Q Consensus 19 ~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~ 60 (93)
-|.-||..||.+++.|+++. ...+.|+.|-+|||.+..
T Consensus 23 ~l~~eN~~Lk~e~~~l~~~~----~~~~~l~~En~rLr~lL~ 60 (255)
T 2j5u_A 23 NTYTENQHLKERLEELAQLE----SEVADLKKENKDLKESLD 60 (255)
T ss_dssp ---CTTTTHHHHHHHHHHHH----HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhc
Confidence 45689999999999988754 467788999999998865
No 5
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=85.06 E-value=2.1 Score=26.19 Aligned_cols=32 Identities=28% Similarity=0.524 Sum_probs=25.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 23 DNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQQNL 64 (93)
Q Consensus 23 EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~QQq~ 64 (93)
.-.+|.+|+++| .-++++||+-||..|+.+.+
T Consensus 11 s~eEL~~rl~~L----------d~~Me~Ei~elr~RY~~KRq 42 (51)
T 2jo8_A 11 TVEDLQKRLLAL----------DPMMEQEIEEIRQKYQSKRQ 42 (51)
T ss_dssp CHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHc----------cHHHHHHHHHHHHHHHHhHh
Confidence 345788888554 56799999999999999866
No 6
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=84.65 E-value=2.2 Score=28.03 Aligned_cols=37 Identities=22% Similarity=0.376 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 25 SALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQ 61 (93)
Q Consensus 25 ~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~Q 61 (93)
.++.++...|+++-.-=.+.-+.|++|+..||.++-|
T Consensus 39 ~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~ 75 (87)
T 1hjb_A 39 LETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQ 75 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555566788888888888775
No 7
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=84.21 E-value=2.2 Score=27.52 Aligned_cols=43 Identities=14% Similarity=0.298 Sum_probs=34.5
Q ss_pred hhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 18 LLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYH 60 (93)
Q Consensus 18 ~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~ 60 (93)
=.+-++|..|+.|+..++++--=-...++.++.|+.++-....
T Consensus 10 q~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld 52 (72)
T 3cve_A 10 QEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILD 52 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3466789999999999998866666669999999998866543
No 8
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=81.65 E-value=5.2 Score=24.08 Aligned_cols=30 Identities=20% Similarity=0.164 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 30 RIAALAQDKIFKDAHQEALKREIQRLRQVY 59 (93)
Q Consensus 30 RL~aL~Qe~~lKda~~EaLkkEieRLk~ly 59 (93)
++..|+++.--=...|+.|+.||..|+.-+
T Consensus 24 ~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~ 53 (63)
T 2wt7_A 24 LTDTLQAETDQLEDEKSALQTEIANLLKEK 53 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555544555555555555554433
No 9
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=81.52 E-value=6.1 Score=25.59 Aligned_cols=55 Identities=11% Similarity=0.050 Sum_probs=42.4
Q ss_pred cchhhHHHHHhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 4 SVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQV 58 (93)
Q Consensus 4 s~LSaqv~~L~qq~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~l 58 (93)
+++..+|+-+.+.....+--+-.|-.+|+.|.++..-=.+..|.+..+++.|+..
T Consensus 2 ~s~e~rv~~LEr~~~~~~q~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~r 56 (83)
T 2xdj_A 2 GSVEDRVTQLERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVER 56 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4567788888775444444556788899999999888889999999999888653
No 10
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=80.70 E-value=6.1 Score=23.46 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 28 KQRIAALAQDKIFKDAHQEALKREIQRLRQVYH 60 (93)
Q Consensus 28 KqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~ 60 (93)
|+++..|++..-.=...|..|+.||..|+.-..
T Consensus 21 k~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~ 53 (61)
T 1t2k_D 21 KVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVA 53 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777766667777777777777765443
No 11
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=78.68 E-value=2.3 Score=27.38 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 27 LKQRIAALAQDKIFKDAHQEALKREIQRLRQVY 59 (93)
Q Consensus 27 LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly 59 (93)
+.++...|+++-..=.+.-+.|++|+..||.++
T Consensus 41 ~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll 73 (78)
T 1gu4_A 41 TQHKVLELTAENERLQKKVEQLSRELSTLRNLF 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444433333344445677777777654
No 12
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=75.79 E-value=1.2 Score=24.48 Aligned_cols=19 Identities=53% Similarity=0.691 Sum_probs=14.5
Q ss_pred hhccccHHHHHHHHHHHHH
Q 045244 19 LLNVDNSALKQRIAALAQD 37 (93)
Q Consensus 19 ~Ls~EN~~LKqRL~aL~Qe 37 (93)
.|..||.+|.|++++|.|.
T Consensus 4 alefendaleqkiaalkqk 22 (28)
T 3ra3_A 4 ALEFENDALEQKIAALKQK 22 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHhccHHHHHHHHHHHHH
Confidence 4667888888888887663
No 13
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=74.71 E-value=2.8 Score=24.02 Aligned_cols=18 Identities=22% Similarity=0.433 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 045244 43 AHQEALKREIQRLRQVYH 60 (93)
Q Consensus 43 a~~EaLkkEieRLk~ly~ 60 (93)
..++.|+.|+.|||.+-+
T Consensus 15 ~~n~~Le~eV~rLk~ll~ 32 (34)
T 2oxj_A 15 XKNXHLEXEVXRLKXLVX 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred HhhhhHHHHHHHHHHHHh
Confidence 357899999999998753
No 14
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=74.45 E-value=1.4 Score=25.10 Aligned_cols=18 Identities=22% Similarity=0.420 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 045244 44 HQEALKREIQRLRQVYHQ 61 (93)
Q Consensus 44 ~~EaLkkEieRLk~ly~Q 61 (93)
.+..|+.||.|||.+-.+
T Consensus 15 ~n~~Le~EV~RLk~Ll~~ 32 (33)
T 3m48_A 15 KNWNLENEVARLKKLVGE 32 (33)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HhHHHHHHHHHHHHHhhc
Confidence 578899999999987543
No 15
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=73.47 E-value=5.4 Score=24.03 Aligned_cols=25 Identities=32% Similarity=0.316 Sum_probs=18.1
Q ss_pred HHHHhhhhhhhccccHHHHHHHHHH
Q 045244 10 VAFLDHQRLLLNVDNSALKQRIAAL 34 (93)
Q Consensus 10 v~~L~qq~~~Ls~EN~~LKqRL~aL 34 (93)
+.-|...-..|..+|..|+..++.|
T Consensus 25 ~~~Le~~v~~L~~~n~~L~~ei~~L 49 (63)
T 2wt7_A 25 TDTLQAETDQLEDEKSALQTEIANL 49 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566667777888888888877543
No 16
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=72.14 E-value=11 Score=22.42 Aligned_cols=31 Identities=26% Similarity=0.255 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 28 KQRIAALAQDKIFKDAHQEALKREIQRLRQV 58 (93)
Q Consensus 28 KqRL~aL~Qe~~lKda~~EaLkkEieRLk~l 58 (93)
|.++..|+...---...|+.|+.||..|+.-
T Consensus 21 k~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e 51 (62)
T 1jnm_A 21 LERIARLEEKVKTLKAQNSELASTANMLREQ 51 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666666666677777777766654
No 17
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=70.95 E-value=19 Score=23.62 Aligned_cols=52 Identities=17% Similarity=0.264 Sum_probs=35.9
Q ss_pred HHHHhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH
Q 045244 10 VAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREI----QRLRQVYHQ 61 (93)
Q Consensus 10 v~~L~qq~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEi----eRLk~ly~Q 61 (93)
|+.|+-.---|-.+|..|.+..+.+....-..+..|+-|+.|. +|||.+++.
T Consensus 22 I~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LLgk 77 (81)
T 2jee_A 22 ITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGR 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455555555666677777777776677777777888888887 477777764
No 18
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=68.75 E-value=3.8 Score=28.17 Aligned_cols=18 Identities=44% Similarity=0.458 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 045244 41 KDAHQEALKREIQRLRQV 58 (93)
Q Consensus 41 Kda~~EaLkkEieRLk~l 58 (93)
||.+.+.|++||++||.-
T Consensus 13 rD~~Ie~Lkreie~lk~e 30 (120)
T 3i00_A 13 KDHLIERLYREISGLKAQ 30 (120)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 577778888888888764
No 19
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=67.92 E-value=11 Score=24.90 Aligned_cols=35 Identities=23% Similarity=0.285 Sum_probs=27.3
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 22 VDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQQN 63 (93)
Q Consensus 22 ~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~QQq 63 (93)
-||..|..+|.++. -....||+|.++||.+..+=|
T Consensus 46 ~EN~~Lh~~ie~l~-------eEi~~lk~en~eL~elae~~q 80 (83)
T 1uii_A 46 KENEKLHKEIEQKD-------NEIARLKKENKELAEVAEHVQ 80 (83)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 48999999988854 455788999999998876543
No 20
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=66.84 E-value=18 Score=21.77 Aligned_cols=20 Identities=35% Similarity=0.331 Sum_probs=8.9
Q ss_pred HhhhhhhhccccHHHHHHHH
Q 045244 13 LDHQRLLLNVDNSALKQRIA 32 (93)
Q Consensus 13 L~qq~~~Ls~EN~~LKqRL~ 32 (93)
|....-.|.-+|.+|+.+++
T Consensus 28 le~~~~~L~~~N~~L~~~i~ 47 (63)
T 1ci6_A 28 LTGECKELEKKNEALKERAD 47 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333444444555544443
No 21
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=65.55 E-value=2.9 Score=26.44 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=14.9
Q ss_pred hhhHHHHHhhhhhhhccccHHHHHHHHHHH
Q 045244 6 LSPRVAFLDHQRLLLNVDNSALKQRIAALA 35 (93)
Q Consensus 6 LSaqv~~L~qq~~~Ls~EN~~LKqRL~aL~ 35 (93)
|..+|.-|...+..|+.||..|+..+..|.
T Consensus 34 LE~~v~~le~~~~~l~~en~~Lr~~i~~L~ 63 (70)
T 1gd2_E 34 LETQVVTLKELHSSTTLENDQLRQKVRQLE 63 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444454444445555555555554444
No 22
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=65.11 E-value=6.1 Score=23.53 Aligned_cols=30 Identities=17% Similarity=0.388 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 30 RIAALAQDKIFKDAHQEALKREIQRLRQVY 59 (93)
Q Consensus 30 RL~aL~Qe~~lKda~~EaLkkEieRLk~ly 59 (93)
.+..|+...-.=..+|..|+.|+..|+..|
T Consensus 23 ~~~~LE~~v~~L~~eN~~L~~~~~~L~~~~ 52 (55)
T 1dh3_A 23 YVKSLENRVAVLENQNKTLIEELKALKDLY 52 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 355555555555556666777776666544
No 23
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=63.67 E-value=21 Score=21.51 Aligned_cols=30 Identities=23% Similarity=0.186 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 29 QRIAALAQDKIFKDAHQEALKREIQRLRQV 58 (93)
Q Consensus 29 qRL~aL~Qe~~lKda~~EaLkkEieRLk~l 58 (93)
.+.+.|++...-=...|..|+.+|.+|+.-
T Consensus 23 ~~~~~le~~~~~L~~~N~~L~~~i~~L~~E 52 (63)
T 1ci6_A 23 AEQEALTGECKELEKKNEALKERADSLAKE 52 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555444445555555555555543
No 24
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=58.81 E-value=13 Score=28.77 Aligned_cols=31 Identities=23% Similarity=0.414 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 045244 26 ALKQRIAALAQDKI-FKDAHQEALKREIQRLRQ 57 (93)
Q Consensus 26 ~LKqRL~aL~Qe~~-lKda~~EaLkkEieRLk~ 57 (93)
.|+.++..|+..-. |+++++ .+++||.+||.
T Consensus 58 eL~~ql~~L~arNe~L~~~Lk-~ar~El~~Lke 89 (251)
T 3m9b_A 58 QLEARIDSLAARNSKLMETLK-EARQQLLALRE 89 (251)
T ss_dssp HHHHHHHHHTTTHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 66777777754444 555443 45666666664
No 25
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=58.42 E-value=30 Score=25.02 Aligned_cols=51 Identities=16% Similarity=0.105 Sum_probs=43.9
Q ss_pred hhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 15 HQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQQNLK 65 (93)
Q Consensus 15 qq~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~QQq~~ 65 (93)
..-..|..|...|+.+|..+..+-.-|....+.|..|+.-|+.-+.....+
T Consensus 68 ~~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~k 118 (152)
T 3a7p_A 68 NTLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQK 118 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567888999999999999999999999999999999999988876554
No 26
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=57.82 E-value=14 Score=23.47 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 29 QRIAALAQDKIFKDAHQEALKREIQRLRQVYH 60 (93)
Q Consensus 29 qRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~ 60 (93)
.++..|+..-..||++...|++++.+++.+..
T Consensus 25 e~I~eLE~~L~~kd~eI~eLr~~LdK~qsVl~ 56 (67)
T 1zxa_A 25 ERIKELEKRLSEKEEEIQELKRKLHKCQSVLP 56 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 46888999999999999999999999887764
No 27
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=57.16 E-value=25 Score=22.40 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 28 KQRIAALAQDKIFKDAHQEALKREIQRLRQV 58 (93)
Q Consensus 28 KqRL~aL~Qe~~lKda~~EaLkkEieRLk~l 58 (93)
|++-..+++....=...|..|+.||+.|+.-
T Consensus 35 k~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E 65 (78)
T 1gu4_A 35 KMRNLETQHKVLELTAENERLQKKVEQLSRE 65 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566667777777777777788887777653
No 28
>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*
Probab=56.70 E-value=2.6 Score=29.31 Aligned_cols=20 Identities=25% Similarity=0.406 Sum_probs=13.2
Q ss_pred HhhhhhhhccccHHHHHHHH
Q 045244 13 LDHQRLLLNVDNSALKQRIA 32 (93)
Q Consensus 13 L~qq~~~Ls~EN~~LKqRL~ 32 (93)
|.-+-.-|.|||++||.+|.
T Consensus 13 LaaeL~kLqmENK~LKkkl~ 32 (110)
T 2oa5_A 13 MVKEVERLKLENKTLKQKVK 32 (110)
T ss_dssp HHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 33444567788888888876
No 29
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=55.48 E-value=32 Score=20.75 Aligned_cols=36 Identities=28% Similarity=0.306 Sum_probs=23.4
Q ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 19 LLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQ 61 (93)
Q Consensus 19 ~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~Q 61 (93)
-|.--|..|=+|+..|+. ....++.||+||+.+-.|
T Consensus 8 kLKe~n~~L~~kv~~Le~-------~c~~~eQEieRL~~LLkq 43 (48)
T 3vmx_A 8 RLKQINIQLATKIQHLEF-------SCSEKEQEIERLNKLLKQ 43 (48)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-------HccHHHHHHHHHHHHHHH
Confidence 344445566666666543 345677999999988655
No 30
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=54.62 E-value=8.5 Score=21.84 Aligned_cols=17 Identities=6% Similarity=0.247 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045244 44 HQEALKREIQRLRQVYH 60 (93)
Q Consensus 44 ~~EaLkkEieRLk~ly~ 60 (93)
.+..|+.|+.|||.+-+
T Consensus 15 ~~~~Le~EV~RLk~lL~ 31 (33)
T 3c3g_A 15 KXYHXENXLARIKXLLX 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HhhHHHHHHHHHHHHHc
Confidence 36789999999998754
No 31
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=54.12 E-value=41 Score=21.88 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 28 KQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQ 61 (93)
Q Consensus 28 KqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~Q 61 (93)
|+|-..+++....=...|+.|+.+|+.|+.-...
T Consensus 35 k~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~ 68 (87)
T 1hjb_A 35 KMRNLETQHKVLELTAENERLQKKVEQLSRELST 68 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666777777777788888888888888766543
No 32
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=54.03 E-value=29 Score=27.30 Aligned_cols=6 Identities=17% Similarity=0.401 Sum_probs=3.2
Q ss_pred HHHHHH
Q 045244 56 RQVYHQ 61 (93)
Q Consensus 56 k~ly~Q 61 (93)
|.+|++
T Consensus 48 r~l~n~ 53 (403)
T 4etp_A 48 RTLHNE 53 (403)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555554
No 33
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=54.00 E-value=6 Score=22.59 Aligned_cols=18 Identities=11% Similarity=0.368 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 045244 44 HQEALKREIQRLRQVYHQ 61 (93)
Q Consensus 44 ~~EaLkkEieRLk~ly~Q 61 (93)
.+..|+.||.|||.+-++
T Consensus 16 ~n~~Le~EV~RLk~LL~~ 33 (34)
T 1uo4_A 16 KLYHIENELARIKKLLGE 33 (34)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHcc
Confidence 467899999999987543
No 34
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=53.50 E-value=9 Score=21.86 Aligned_cols=17 Identities=12% Similarity=0.141 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045244 44 HQEALKREIQRLRQVYH 60 (93)
Q Consensus 44 ~~EaLkkEieRLk~ly~ 60 (93)
.+..|+.||.|||.+-+
T Consensus 16 ~~~~Le~EV~RLk~ll~ 32 (34)
T 3c3f_A 16 XLYHXENEXARIXKLLX 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHh
Confidence 36789999999998754
No 35
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=52.64 E-value=27 Score=26.92 Aligned_cols=29 Identities=21% Similarity=0.127 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 30 RIAALAQDKIFKDAHQEALKREIQRLRQV 58 (93)
Q Consensus 30 RL~aL~Qe~~lKda~~EaLkkEieRLk~l 58 (93)
|+..|..+.....+.|+.|+.++.++|.-
T Consensus 55 ~l~eL~~ql~~L~arNe~L~~~Lk~ar~E 83 (251)
T 3m9b_A 55 DIHQLEARIDSLAARNSKLMETLKEARQQ 83 (251)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555566665555543
No 36
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=51.10 E-value=21 Score=25.07 Aligned_cols=45 Identities=11% Similarity=0.134 Sum_probs=32.2
Q ss_pred hhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 15 HQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVY 59 (93)
Q Consensus 15 qq~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly 59 (93)
..-.++.+++..+..+++....+...-.+..+..+++.+|.+.+|
T Consensus 46 kGq~L~~ld~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~ 90 (277)
T 2f1m_A 46 AGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLL 90 (277)
T ss_dssp TTSCSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344677888988888888777666555666666777777776655
No 37
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=50.32 E-value=52 Score=24.60 Aligned_cols=30 Identities=13% Similarity=0.094 Sum_probs=13.5
Q ss_pred HHHHHhhhhhhhccccHHHHHHHHHHHHHH
Q 045244 9 RVAFLDHQRLLLNVDNSALKQRIAALAQDK 38 (93)
Q Consensus 9 qv~~L~qq~~~Ls~EN~~LKqRL~aL~Qe~ 38 (93)
++..|.++.-...-|+++|+.+|+++..+-
T Consensus 28 En~~L~~ql~~k~~ei~~L~~ql~sl~~~~ 57 (190)
T 4emc_A 28 ENFVLSEKLDTKATEIKQLQKQIDSLNAQV 57 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 333333444444444445555555554443
No 38
>3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens}
Probab=48.67 E-value=46 Score=23.65 Aligned_cols=43 Identities=19% Similarity=0.255 Sum_probs=38.9
Q ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 19 LLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQ 61 (93)
Q Consensus 19 ~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~Q 61 (93)
-+++.|..|+.+.++|+..-.+-.+-...=|+=.-.|+.+|++
T Consensus 52 q~~~~~d~L~lQ~esmeaalkmEr~~~~eEKrkLAqLQ~AY~~ 94 (130)
T 3cl3_D 52 QHSVQVDQLRMQGQSVEAALRMERQAASEEKRKLAQLQVAYHQ 94 (130)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678899999999999999999888888889999999999998
No 39
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=48.27 E-value=35 Score=19.10 Aligned_cols=28 Identities=57% Similarity=0.662 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 25 SALKQRIAALAQDKIFKDAHQEALKREIQRLRQVY 59 (93)
Q Consensus 25 ~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly 59 (93)
.+|||.+++|..+ --+||=||.-||+-|
T Consensus 5 aalkqeiaalkke-------iaalkfeiaalkqgy 32 (33)
T 4dzn_A 5 AALKQEIAALKKE-------IAALKFEIAALKQGY 32 (33)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHccc
Confidence 4677777766543 346677777777654
No 40
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=47.90 E-value=40 Score=22.25 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=25.9
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 22 VDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQ 61 (93)
Q Consensus 22 ~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~Q 61 (93)
-||..|..++..+ +.....||.|..+|+-+..+
T Consensus 38 ~EN~~Lh~~ie~~-------~eEi~~Lk~en~~L~elA~~ 70 (83)
T 1wlq_A 38 KENEKLHKEIEQK-------DSEIARLRKENKDLAEVAEH 70 (83)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 3788888777765 45567899999999988877
No 41
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=47.82 E-value=33 Score=22.69 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=24.4
Q ss_pred hhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 17 RLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYH 60 (93)
Q Consensus 17 ~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~ 60 (93)
...|--||..|...++.|.++ +..+.+|+..+|..|.
T Consensus 50 ~~~LE~e~~~L~~e~~~L~~e-------~~~~~~e~d~~k~k~~ 86 (90)
T 2wt7_B 50 KHHLENEKTQLIQQVEQLKQE-------VSRLARERDAYKVKSE 86 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 355666777777777766653 4566777777777664
No 42
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=47.27 E-value=62 Score=21.73 Aligned_cols=50 Identities=20% Similarity=0.155 Sum_probs=30.6
Q ss_pred HHHHHhhhhhhhccccHHHHHHHHHHHHHHHH----------------------------HHHHHHHHHHHHHHHHHH
Q 045244 9 RVAFLDHQRLLLNVDNSALKQRIAALAQDKIF----------------------------KDAHQEALKREIQRLRQV 58 (93)
Q Consensus 9 qv~~L~qq~~~Ls~EN~~LKqRL~aL~Qe~~l----------------------------Kda~~EaLkkEieRLk~l 58 (93)
.+.-|-..---|.+||..|+.+++.|+-+.-- ..-..+.|..|++|||..
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~~~l~Gd~~~~~TKVlH~~~NPa~~a~~~~~~~~e~Lq~E~erLr~~ 90 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMSLNPTSVARQRLREDHSQLQAECERLRGL 90 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCCCTTTEEEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccCeeeeecCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555556777777777777665432111 113456788999999865
No 43
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=47.07 E-value=85 Score=24.28 Aligned_cols=9 Identities=33% Similarity=0.438 Sum_probs=3.3
Q ss_pred HHHHHHHHH
Q 045244 48 LKREIQRLR 56 (93)
Q Consensus 48 LkkEieRLk 56 (93)
+++|+..++
T Consensus 563 l~~e~~~~~ 571 (597)
T 3oja_B 563 LRQETSLKR 571 (597)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 44
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=44.36 E-value=23 Score=20.36 Aligned_cols=17 Identities=24% Similarity=0.308 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045244 45 QEALKREIQRLRQVYHQ 61 (93)
Q Consensus 45 ~EaLkkEieRLk~ly~Q 61 (93)
+..|+.||.|||.+-+.
T Consensus 17 ~~~Le~eV~RLk~ll~~ 33 (36)
T 1kd8_B 17 LWHLKNKVARLKKKNAE 33 (36)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 56799999999987654
No 45
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=43.81 E-value=9.1 Score=25.14 Aligned_cols=28 Identities=18% Similarity=0.389 Sum_probs=19.5
Q ss_pred HHHHhhhhhhhccccHHHHHHHHHHHHH
Q 045244 10 VAFLDHQRLLLNVDNSALKQRIAALAQD 37 (93)
Q Consensus 10 v~~L~qq~~~Ls~EN~~LKqRL~aL~Qe 37 (93)
.+-|.-.-+.|+.||.-|.+||+.|.++
T Consensus 48 ~ErLNDEiislNIENNlL~~rl~~l~~E 75 (75)
T 3a7o_A 48 TERLNDELISGTIENNVLQQKLSDLKKE 75 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHhhHHHHHhHHHHHHHHHHHHHHhcC
Confidence 4556677788999999999999988764
No 46
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=43.73 E-value=60 Score=20.58 Aligned_cols=37 Identities=24% Similarity=0.476 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 25 SALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQ 61 (93)
Q Consensus 25 ~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~Q 61 (93)
..|+.+|.++..++---+++-+-++..++.+|..|.-
T Consensus 3 ~eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~ 39 (86)
T 3swk_A 3 RELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQE 39 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577777777777777777777778888888877764
No 47
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=42.94 E-value=16 Score=22.81 Aligned_cols=11 Identities=18% Similarity=0.510 Sum_probs=5.4
Q ss_pred ccchhhHHHHH
Q 045244 3 VSVLSPRVAFL 13 (93)
Q Consensus 3 ~s~LSaqv~~L 13 (93)
|+.|.--|.|+
T Consensus 42 a~IL~~Ai~YI 52 (82)
T 1am9_A 42 SAVLRKAIDYI 52 (82)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34455555554
No 48
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=42.39 E-value=44 Score=26.52 Aligned_cols=18 Identities=28% Similarity=0.375 Sum_probs=8.2
Q ss_pred hhccccHHHHHHHHHHHH
Q 045244 19 LLNVDNSALKQRIAALAQ 36 (93)
Q Consensus 19 ~Ls~EN~~LKqRL~aL~Q 36 (93)
.|..|..+|+.++..+.+
T Consensus 7 ~l~~el~~~~~~~~~l~~ 24 (412)
T 3u06_A 7 ALSTEVVHLRQRTEELLR 24 (412)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444433
No 49
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=41.69 E-value=56 Score=19.60 Aligned_cols=40 Identities=28% Similarity=0.402 Sum_probs=25.1
Q ss_pred HHhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 12 FLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQV 58 (93)
Q Consensus 12 ~L~qq~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~l 58 (93)
-|...-..|..||..||.+ -+-|.-+---|++||..||..
T Consensus 7 qlenevaslenenetlkkk-------nlhkkdliaylekeianlrkk 46 (49)
T 3he5_A 7 QLENEVASLENENETLKKK-------NLHKKDLIAYLEKEIANLRKK 46 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccHHHHHh-------cccHHHHHHHHHHHHHHHHHH
Confidence 3444445556667666643 344555566789999999853
No 50
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=41.65 E-value=15 Score=20.94 Aligned_cols=17 Identities=12% Similarity=0.350 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045244 44 HQEALKREIQRLRQVYH 60 (93)
Q Consensus 44 ~~EaLkkEieRLk~ly~ 60 (93)
.+..|..|+.|||.+-+
T Consensus 16 ~~~~L~~EV~RLk~lL~ 32 (34)
T 2bni_A 16 KGHHICNELARIKKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred ccHHHHHHHHHHHHHhc
Confidence 35789999999998754
No 51
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=41.35 E-value=12 Score=22.34 Aligned_cols=16 Identities=19% Similarity=0.457 Sum_probs=9.1
Q ss_pred hccccHHHHHHHHHHH
Q 045244 20 LNVDNSALKQRIAALA 35 (93)
Q Consensus 20 Ls~EN~~LKqRL~aL~ 35 (93)
|-.||..||.|+..|.
T Consensus 24 Lk~E~~eLk~k~~~L~ 39 (53)
T 2yy0_A 24 LRLELAEMKEKYEAIV 39 (53)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4456666666655554
No 52
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=40.58 E-value=15 Score=24.09 Aligned_cols=17 Identities=18% Similarity=0.393 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045244 44 HQEALKREIQRLRQVYH 60 (93)
Q Consensus 44 ~~EaLkkEieRLk~ly~ 60 (93)
++++|+-|+..+++...
T Consensus 45 E~e~l~~El~s~~~~~~ 61 (77)
T 2w83_C 45 EKDVLQGELEAVKQAKL 61 (77)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45677777777666543
No 53
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=39.40 E-value=51 Score=25.07 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=25.9
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 22 VDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQQ 62 (93)
Q Consensus 22 ~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~QQ 62 (93)
-||..|..+|..+. -+...||+|.++||-+..+=
T Consensus 115 eEN~~Lh~~ie~l~-------eEi~~LkeEn~eLkeLae~~ 148 (209)
T 2wvr_A 115 KENEKLHKEIEQKD-------NEIARLKKENKELAEVAEHV 148 (209)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 48999999988844 45567888888888887763
No 54
>2e50_A Protein SET; histone chaperone, inhat, PP2AI, protein binding; HET: TRE; 2.30A {Homo sapiens} SCOP: d.305.1.1
Probab=39.32 E-value=92 Score=22.77 Aligned_cols=44 Identities=16% Similarity=0.167 Sum_probs=37.6
Q ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 19 LLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQQ 62 (93)
Q Consensus 19 ~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~QQ 62 (93)
++.....+++.+|.+|..-+.=-+.+++...+|+-+|...|...
T Consensus 20 ~~~~~~~~~~~~l~~L~~iQ~e~~~l~~e~~~ev~~lE~ky~~~ 63 (225)
T 2e50_A 20 ADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKL 63 (225)
T ss_dssp -CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566778999999999999999999999999999998888764
No 55
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=38.91 E-value=83 Score=20.82 Aligned_cols=50 Identities=18% Similarity=0.320 Sum_probs=35.9
Q ss_pred HHHhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045244 11 AFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQQNLKKM 67 (93)
Q Consensus 11 ~~L~qq~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~QQq~~~~ 67 (93)
..+..-...|+....+|..|++.|..+ ...|++|++.|+...-...-...
T Consensus 14 ~~l~~~a~~Lk~~~~~l~~~v~~l~~e-------~k~l~ke~~~l~~~~a~~~~~~l 63 (171)
T 2zvf_A 14 RLLREASSILRVEPAKLPKTVERFFEE-------WKDQRKEIERLKSVIADLWADIL 63 (171)
T ss_dssp HHHHHHHHTTTCCTTSHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566777767899999998776 55889999999977666544443
No 56
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=38.69 E-value=76 Score=20.30 Aligned_cols=35 Identities=14% Similarity=0.321 Sum_probs=21.9
Q ss_pred HHHHHHHHHHH-----HHHHHHH--HHHHHHHHHHHHHHHHH
Q 045244 27 LKQRIAALAQD-----KIFKDAH--QEALKREIQRLRQVYHQ 61 (93)
Q Consensus 27 LKqRL~aL~Qe-----~~lKda~--~EaLkkEieRLk~ly~Q 61 (93)
+-.|++.+++. ..+-+.. .+.|+.||.+||-.-.+
T Consensus 4 ~e~rv~~LEr~~~~~~q~~~~Lq~Ql~~Lq~Ev~~LRGqiE~ 45 (83)
T 2xdj_A 4 VEDRVTQLERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQE 45 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 34566666642 2233443 35899999999976555
No 57
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=38.54 E-value=30 Score=19.67 Aligned_cols=17 Identities=18% Similarity=0.206 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045244 44 HQEALKREIQRLRQVYH 60 (93)
Q Consensus 44 ~~EaLkkEieRLk~ly~ 60 (93)
.+..|..|+.|||.+-+
T Consensus 16 ~~~~Le~eV~RL~~ll~ 32 (34)
T 2hy6_A 16 ANYHLANAVARLAKAVG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhc
Confidence 35679999999998753
No 58
>2lw9_A Unconventionnal myosin-X; MYO10 anti-CC, motor protein; NMR {Homo sapiens}
Probab=37.48 E-value=26 Score=21.49 Aligned_cols=16 Identities=38% Similarity=0.596 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 045244 47 ALKREIQRLRQVYHQQ 62 (93)
Q Consensus 47 aLkkEieRLk~ly~QQ 62 (93)
.|++||++|.....++
T Consensus 10 RLErEIE~Lqrqke~~ 25 (51)
T 2lw9_A 10 RLEKEIEDLQRMKEQQ 25 (51)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5899999997665554
No 59
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=37.25 E-value=1e+02 Score=24.69 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 25 SALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQ 61 (93)
Q Consensus 25 ~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~Q 61 (93)
...|.||.+|..-+.=-+.++..+.+|+-+|+..|..
T Consensus 49 ~~v~~rI~aLk~lQ~E~~~le~ef~eEv~~LE~KY~k 85 (359)
T 3fs3_A 49 EEQKETLKKLKLYQKEYYDYESKFEYELFLLRQKYHD 85 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999987777788888888999999888864
No 60
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=36.57 E-value=67 Score=20.30 Aligned_cols=13 Identities=31% Similarity=0.618 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHH
Q 045244 43 AHQEALKREIQRL 55 (93)
Q Consensus 43 a~~EaLkkEieRL 55 (93)
..++.|+++++.|
T Consensus 73 ~~n~~L~~rl~~L 85 (88)
T 1nkp_A 73 KRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 3444555555444
No 61
>3bbp_D GRIP and coiled-coil domain-containing protein 2; golgi complex, GRIP domain, RAB GTPase, ARL GTPase, golgin, RAB effector, clAsp protein; HET: GTP; 3.00A {Homo sapiens}
Probab=35.96 E-value=21 Score=23.19 Aligned_cols=15 Identities=40% Similarity=0.479 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHH
Q 045244 42 DAHQEALKREIQRLR 56 (93)
Q Consensus 42 da~~EaLkkEieRLk 56 (93)
--+++.||.||.||-
T Consensus 49 ~eq~~lLK~EIRRlE 63 (71)
T 3bbp_D 49 MEQIKLLKSEIRRLE 63 (71)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 346788999999984
No 62
>2cly_C ATP synthase coupling factor 6, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus} SCOP: f.45.1.1 PDB: 1vzs_A 2wss_V*
Probab=35.87 E-value=23 Score=23.09 Aligned_cols=17 Identities=41% Similarity=0.686 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045244 44 HQEALKREIQRLRQVYH 60 (93)
Q Consensus 44 ~~EaLkkEieRLk~ly~ 60 (93)
....|++|+.||...||
T Consensus 36 ~~kel~~el~kL~~~YG 52 (77)
T 2cly_C 36 YQQDLDRELFKLKQMYG 52 (77)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHC
Confidence 46789999999999998
No 63
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=35.84 E-value=38 Score=25.34 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=23.7
Q ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 19 LLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVY 59 (93)
Q Consensus 19 ~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly 59 (93)
.|..||..|.+.|+ -|+-+.++|++++.-||.-.
T Consensus 24 ~L~~En~~L~~ql~-------~k~~ei~~L~~ql~sl~~~~ 57 (190)
T 4emc_A 24 NLVNENFVLSEKLD-------TKATEIKQLQKQIDSLNAQV 57 (190)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHhhh
Confidence 45566777766666 45666788888888877655
No 64
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=33.76 E-value=1.3e+02 Score=23.48 Aligned_cols=50 Identities=20% Similarity=0.232 Sum_probs=21.5
Q ss_pred hhhHHHHHhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 6 LSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRL 55 (93)
Q Consensus 6 LSaqv~~L~qq~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRL 55 (93)
+..++..+.+...-|.-+...++.++..+.+...-.+.+...|-.+++.|
T Consensus 8 ~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~el 57 (403)
T 4etp_A 8 LKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQEL 57 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33444444444444444444444444444444333333333344444443
No 65
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=33.40 E-value=37 Score=22.22 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=20.4
Q ss_pred ccchhhHHHHHhhhh-------------hhhccccHHHHHHHHHHHHH
Q 045244 3 VSVLSPRVAFLDHQR-------------LLLNVDNSALKQRIAALAQD 37 (93)
Q Consensus 3 ~s~LSaqv~~L~qq~-------------~~Ls~EN~~LKqRL~aL~Qe 37 (93)
++.|+.-|+|..+.. -.|-+.|..|..|++-|+-+
T Consensus 31 g~IL~ksvdYI~~Lq~e~~r~~e~e~r~k~le~~n~~l~~riqELE~q 78 (83)
T 4ath_A 31 GTILKASVDYIRKLQREQQRAKDLENRQKKLEHANRHLLLRVQELEMQ 78 (83)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 577888888775432 23445555555555555543
No 66
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=32.99 E-value=44 Score=19.14 Aligned_cols=17 Identities=24% Similarity=0.243 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045244 44 HQEALKREIQRLRQVYH 60 (93)
Q Consensus 44 ~~EaLkkEieRLk~ly~ 60 (93)
.+..|+.||.|||.+-+
T Consensus 16 ~~~~Le~EV~RL~~ll~ 32 (36)
T 1kd8_A 16 EVWHLENEVARLEKENA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhc
Confidence 35678999999997753
No 67
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=32.96 E-value=58 Score=25.85 Aligned_cols=52 Identities=17% Similarity=0.277 Sum_probs=31.0
Q ss_pred hhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhh
Q 045244 17 RLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVY--HQQNLKKME 68 (93)
Q Consensus 17 ~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly--~QQq~~~~~ 68 (93)
...|+-.|..|..|+..|+.+.-+-..+++.++.|+..++.-+ -+.+.+...
T Consensus 37 ~~~l~~~~~dl~~~lk~le~~~~~L~~e~e~l~~~~~~~~~e~~~~~ee~~~l~ 90 (428)
T 4b4t_K 37 NSALSNVNSDIYFKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQ 90 (428)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3456667889999999999998888888888888888886544 344444443
No 68
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=32.91 E-value=90 Score=21.48 Aligned_cols=37 Identities=16% Similarity=0.250 Sum_probs=31.7
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 21 NVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQ 57 (93)
Q Consensus 21 s~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ 57 (93)
.+|=..|+.+|.+.+..---|...-+.||.||.+++.
T Consensus 23 ~~ei~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~ 59 (110)
T 2v4h_A 23 SMQLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKI 59 (110)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455689999999999988999999999999998766
No 69
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=31.47 E-value=38 Score=19.12 Aligned_cols=15 Identities=20% Similarity=0.071 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHH
Q 045244 45 QEALKREIQRLRQVY 59 (93)
Q Consensus 45 ~EaLkkEieRLk~ly 59 (93)
+..|..||.|||.+-
T Consensus 16 ~~~le~EV~Rl~~ll 30 (33)
T 2wq1_A 16 IYHNTNEIARNTKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHh
Confidence 467889999999764
No 70
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=30.98 E-value=21 Score=19.79 Aligned_cols=16 Identities=31% Similarity=0.544 Sum_probs=10.6
Q ss_pred hhccccHHHHHHHHHH
Q 045244 19 LLNVDNSALKQRIAAL 34 (93)
Q Consensus 19 ~Ls~EN~~LKqRL~aL 34 (93)
.|..||+.||-+.+.|
T Consensus 10 sleaenkqlkakveel 25 (31)
T 1p9i_A 10 SLEAENKQLKAKVEEL 25 (31)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3556788877776544
No 71
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=30.44 E-value=83 Score=20.44 Aligned_cols=39 Identities=18% Similarity=0.310 Sum_probs=16.8
Q ss_pred hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 20 LNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQQ 62 (93)
Q Consensus 20 Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~QQ 62 (93)
|+.+=.+||+.++++..- ...-+.|++++++|+.+..+|
T Consensus 4 l~~~~~~l~~~~~~~~~l----~~~~~~l~~~l~~~~~~l~~~ 42 (182)
T 3kqg_A 4 LNAQIPELKSDLEKASAL----NTKIRALQGSLENMSKLLKRQ 42 (182)
T ss_dssp ---------CHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555554331 122246777777777776654
No 72
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=29.56 E-value=28 Score=18.87 Aligned_cols=13 Identities=62% Similarity=0.716 Sum_probs=8.1
Q ss_pred ccHHHHHHHHHHH
Q 045244 23 DNSALKQRIAALA 35 (93)
Q Consensus 23 EN~~LKqRL~aL~ 35 (93)
.|..|||.+++|+
T Consensus 8 knarlkqeiaale 20 (28)
T 3ra3_B 8 KNARLKQEIAALE 20 (28)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHH
Confidence 4566666666654
No 73
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=28.97 E-value=1.3e+02 Score=20.10 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 25 SALKQRIAALAQDKIFKDAHQEALKREIQRLRQVY 59 (93)
Q Consensus 25 ~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly 59 (93)
..|+.+|.+.+.-...|..+-+.||.||.+++..-
T Consensus 5 ~~L~~~L~~aEeaL~~kq~~id~lke~~~q~~~~~ 39 (94)
T 3jsv_C 5 EDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVM 39 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999988543
No 74
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=28.73 E-value=1.1e+02 Score=18.90 Aligned_cols=42 Identities=24% Similarity=0.328 Sum_probs=28.3
Q ss_pred HHHhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 11 AFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVY 59 (93)
Q Consensus 11 ~~L~qq~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly 59 (93)
.-|-||--.|..||+.||+.|..=+.. | -.|+.|.-.||.+-
T Consensus 6 dQL~~QVe~Lk~ENshLrrEL~dNS~~--l-----skLE~ets~mKevl 47 (54)
T 1deb_A 6 DQLLKQVEALKMENSNLRQELEDNSNH--L-----TKLETEASNMKEVL 47 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--H-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhHHH--H-----HHHHhhhhhHHHHH
Confidence 446678888999999999999876543 2 23444555555443
No 75
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=27.31 E-value=1.3e+02 Score=19.32 Aligned_cols=41 Identities=27% Similarity=0.420 Sum_probs=22.1
Q ss_pred HHHHHhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 9 RVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQV 58 (93)
Q Consensus 9 qv~~L~qq~~~Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~l 58 (93)
+|.||.++|..|..+=..++.+ . ..-...+...||..||..
T Consensus 24 KVR~LEqqN~~Le~~i~~l~~~-------~--~~~~~~~ye~~i~~Lr~~ 64 (93)
T 3s4r_A 24 KVRFLEQQNKILLAELEQLKGQ-------G--KSRLGDLYEEEMRELRRQ 64 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-------H--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-------c--CCCcHHHHHHHHHHHHHH
Confidence 5677777766665554444432 1 112334556666666643
No 76
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=26.84 E-value=1.5e+02 Score=20.20 Aligned_cols=28 Identities=21% Similarity=0.320 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 33 ALAQDKIFKDAHQEALKREIQRLRQVYH 60 (93)
Q Consensus 33 aL~Qe~~lKda~~EaLkkEieRLk~ly~ 60 (93)
+|-.+-.-.+-..+.+++|+..|+.-..
T Consensus 93 ~lK~el~~~~~k~e~~~~e~~~l~~~~~ 120 (138)
T 3hnw_A 93 DLKHELIAAQIKAESSAKEIKELKSEIN 120 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3434444444555666666666655444
No 77
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=26.59 E-value=1.3e+02 Score=20.32 Aligned_cols=19 Identities=26% Similarity=0.384 Sum_probs=12.2
Q ss_pred hhhhccccHHHHHHHHHHH
Q 045244 17 RLLLNVDNSALKQRIAALA 35 (93)
Q Consensus 17 ~~~Ls~EN~~LKqRL~aL~ 35 (93)
+..|.-+|..|+-....+.
T Consensus 24 n~~l~~eN~~Lk~e~e~l~ 42 (155)
T 2oto_A 24 NIRLRHENKDLKARLENAM 42 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 4466667777777766553
No 78
>2js5_A Uncharacterized protein; homodimer, protein structure, spectroscopy, structural genomics, PSI-2, protein structure initiative; NMR {Methylococcus capsulatus}
Probab=26.55 E-value=52 Score=21.06 Aligned_cols=18 Identities=22% Similarity=0.307 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 045244 45 QEALKREIQRLRQVYHQQ 62 (93)
Q Consensus 45 ~EaLkkEieRLk~ly~QQ 62 (93)
.++||+||.+|+....|.
T Consensus 5 i~eLkkevkKL~~~A~q~ 22 (71)
T 2js5_A 5 AEELKAKLKKLNAQATAL 22 (71)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 368999999999998885
No 79
>2wpq_A Trimeric autotransporter adhesin fragment; hydrophobic core, ION coordination, protein export, TAA, membrane protein, polar core; 1.85A {Salmonella enterica subsp}
Probab=25.82 E-value=1.6e+02 Score=20.00 Aligned_cols=33 Identities=12% Similarity=0.177 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 26 ALKQRIAALAQDKIFKDAHQEALKREIQRLRQV 58 (93)
Q Consensus 26 ~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~l 58 (93)
.|=-.+.+|.+++++=+.-.=-++.||.|||.+
T Consensus 66 NL~dsv~~L~DDALLWn~~~~~~~~~~~~~~~~ 98 (99)
T 2wpq_A 66 NLSDSMKQIEDKIEEILSKIYHIENEIARIKKL 98 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhHHHHHHcchhhhhHHHHHHHHhc
Confidence 355677799999999999888999999999865
No 80
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=25.49 E-value=2.1e+02 Score=22.54 Aligned_cols=35 Identities=17% Similarity=0.087 Sum_probs=19.6
Q ss_pred cccchhhHHHHHhhhhhhhccccHHHHHHHHHHHH
Q 045244 2 EVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQ 36 (93)
Q Consensus 2 E~s~LSaqv~~L~qq~~~Ls~EN~~LKqRL~aL~Q 36 (93)
|.-+|+.++.-+....--|.-++..++..++.+.+
T Consensus 4 ~~~~l~~el~~~~~~~~~l~~~~~~~~~~~~~~~~ 38 (412)
T 3u06_A 4 MHAALSTEVVHLRQRTEELLRCNEQQAAELETCKE 38 (412)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456666666666555555555555555555543
No 81
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=24.94 E-value=1.2e+02 Score=18.83 Aligned_cols=11 Identities=36% Similarity=0.703 Sum_probs=4.4
Q ss_pred HHHHHHHHHHH
Q 045244 46 EALKREIQRLR 56 (93)
Q Consensus 46 EaLkkEieRLk 56 (93)
+.|++|.+-|+
T Consensus 64 ~~L~~e~~~L~ 74 (80)
T 1nlw_A 64 DQLQREQRHLK 74 (80)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33444444333
No 82
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=24.83 E-value=31 Score=22.73 Aligned_cols=45 Identities=22% Similarity=0.358 Sum_probs=31.0
Q ss_pred hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 045244 20 LNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQQNLKKMENGA 71 (93)
Q Consensus 20 Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~QQq~~~~~~~~ 71 (93)
..=|=--||-+|..|.- .+..|+.|=.-||...-..++.+....-
T Consensus 13 VREEVevLKe~I~EL~e-------~~~qLE~EN~~Lk~~aspEql~q~q~~l 57 (78)
T 1dip_A 13 VREEVEILKEQIRELVE-------KNSQLERENTLLKTLASPEQLEKFQSRL 57 (78)
T ss_dssp CTTSCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHTSSSCSCCCSSSS
T ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHhCCHHHHHHHHhcc
Confidence 33455568888877753 4567888888899888777766655544
No 83
>1c94_A Retro-GCN4 leucine zipper; retro-coiled coil, 4-alpha-helix-bundle, peptide synthesis, gene regulation; 2.08A {Synthetic} SCOP: k.11.1.1
Probab=24.31 E-value=26 Score=20.13 Aligned_cols=28 Identities=25% Similarity=0.507 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 30 RIAALAQDKIFKDAHQEALKREIQRLRQ 57 (93)
Q Consensus 30 RL~aL~Qe~~lKda~~EaLkkEieRLk~ 57 (93)
+|-+.+-+-.....+-|..|.|++.+|+
T Consensus 10 klravenelhynkslleevkdelqkmrq 37 (38)
T 1c94_A 10 KLRAVENELHYNKSLLEEVKDELQKMRQ 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHhc
Confidence 4667777888888888888999888775
No 84
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=23.54 E-value=89 Score=18.31 Aligned_cols=15 Identities=13% Similarity=0.315 Sum_probs=6.3
Q ss_pred hccccHHHHHHHHHH
Q 045244 20 LNVDNSALKQRIAAL 34 (93)
Q Consensus 20 Ls~EN~~LKqRL~aL 34 (93)
|.-||.+||.+++.+
T Consensus 39 l~~e~~~L~~~~~~l 53 (57)
T 2wuj_A 39 VLRKKTELEAKVNEL 53 (57)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444443
No 85
>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A* 1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1* 2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1* 1fif_A 1fih_A*
Probab=23.41 E-value=95 Score=19.58 Aligned_cols=25 Identities=16% Similarity=0.380 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 26 ALKQRIAALAQDKIFKDAHQEALKREIQRLRQ 57 (93)
Q Consensus 26 ~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ 57 (93)
+||++|..|+.+ -..|+.++.+|+.
T Consensus 1 ~~~~~l~~l~~~-------~~~l~~~l~~l~~ 25 (149)
T 1rtm_1 1 AIEVKLANMEAE-------INTLKSKLELTNK 25 (149)
T ss_dssp CHHHHHHHHHHH-------HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH-------HHHHHHHHHHHhh
Confidence 377888777653 3456666666665
No 86
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=23.40 E-value=1.6e+02 Score=19.32 Aligned_cols=34 Identities=26% Similarity=0.491 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 26 ALKQRIAALAQDKIFKDAHQEALKREIQRLRQVY 59 (93)
Q Consensus 26 ~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly 59 (93)
.|+.+|..+..++---.++-+-++.+++.+|..|
T Consensus 24 ~LR~qid~~~~e~a~l~leldn~~~~~edfk~Ky 57 (119)
T 3ol1_A 24 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREKL 57 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444444444444433444444444444444444
No 87
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=23.16 E-value=1.6e+02 Score=20.92 Aligned_cols=56 Identities=18% Similarity=0.250 Sum_probs=40.6
Q ss_pred cccchhhHHHHHhhhhhhhccccHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 2 EVSVLSPRVAFLDHQRLLLNVDNSA---LKQRIAALAQDKIFKDAHQEALKREIQRLRQVY 59 (93)
Q Consensus 2 E~s~LSaqv~~L~qq~~~Ls~EN~~---LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly 59 (93)
|+-+||+ ++++.-|.+...++.+ ++.|...|..+-.=+++.-+.|...+.+||.+.
T Consensus 87 ElEeLTa--sLFeEAN~MVa~ar~~~~~~e~r~~~L~~ql~e~~~~l~~lq~ql~~LK~v~ 145 (154)
T 2ocy_A 87 EVEDLTA--SLFDEANNMVADARKEKYAIEILNKRLTEQLREKDTLLDTLTLQLKNLKKVM 145 (154)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445665 5677777777665544 677777777777778888888888888888764
No 88
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=22.86 E-value=1.2e+02 Score=18.37 Aligned_cols=11 Identities=36% Similarity=0.462 Sum_probs=4.6
Q ss_pred HHHHHHHHHHH
Q 045244 46 EALKREIQRLR 56 (93)
Q Consensus 46 EaLkkEieRLk 56 (93)
+.|++|...|+
T Consensus 64 ~~L~~~~~~L~ 74 (83)
T 1nkp_B 64 DDLKRQNALLE 74 (83)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444444443
No 89
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=22.81 E-value=27 Score=23.33 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=7.9
Q ss_pred ccchhhHHHHHhhh-------------hhhhccccHHHHHHHHHHHHHH
Q 045244 3 VSVLSPRVAFLDHQ-------------RLLLNVDNSALKQRIAALAQDK 38 (93)
Q Consensus 3 ~s~LSaqv~~L~qq-------------~~~Ls~EN~~LKqRL~aL~Qe~ 38 (93)
|+.|.--|.|+... .--|-.+|..|+.||+.|+-++
T Consensus 66 a~IL~~aieYIk~Lq~~~~~l~~~~~~~~~l~~~n~~L~~riqeLE~~a 114 (118)
T 4ati_A 66 GTILKASVDYIRKLQREQQRAKDLENRQKKLEHANRHLLLRVQELEMQA 114 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC-----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666432 1234566777777777666544
No 90
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=22.55 E-value=30 Score=22.87 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=15.6
Q ss_pred ccchhhHHHHHhhhhhhhccccHHHHHHHHHH
Q 045244 3 VSVLSPRVAFLDHQRLLLNVDNSALKQRIAAL 34 (93)
Q Consensus 3 ~s~LSaqv~~L~qq~~~Ls~EN~~LKqRL~aL 34 (93)
.+.|..++..|-+.+.-+.-|=..+|+++++|
T Consensus 57 ~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 57 KTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444455555555555555555555554443
No 91
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=21.74 E-value=2.7e+02 Score=22.45 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=33.6
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 23 DNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQQ 62 (93)
Q Consensus 23 EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~QQ 62 (93)
=-..+|.||.+|..-+.=.+.++..+.+|+-.|...|...
T Consensus 88 Lp~~v~~rI~aLk~lQ~e~~~le~ef~~ev~eLE~Ky~~~ 127 (417)
T 2ayu_A 88 LPKNVKEKLLSLKTLQSELFEVEKEFQVEMFELENKFLQK 127 (417)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4468899999999888888888888889999888888764
No 92
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=21.11 E-value=91 Score=17.60 Aligned_cols=16 Identities=13% Similarity=0.123 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHH
Q 045244 45 QEALKREIQRLRQVYH 60 (93)
Q Consensus 45 ~EaLkkEieRLk~ly~ 60 (93)
+..|..|+.|||.+-+
T Consensus 17 ~~~l~nEv~Rl~~lLg 32 (34)
T 2r2v_A 17 LYHNANELARVAKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhc
Confidence 4578899999998754
No 93
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=21.04 E-value=1.6e+02 Score=18.37 Aligned_cols=30 Identities=20% Similarity=0.337 Sum_probs=19.0
Q ss_pred hccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 20 LNVDNSALKQRIAALAQDKIFKDAHQEALK 49 (93)
Q Consensus 20 Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLk 49 (93)
|++.-..|-.||..|+-..-+.+-.-+.|-
T Consensus 5 ~~~~~~~le~Ri~~LE~klAfqE~tIeeLn 34 (78)
T 3efg_A 5 LSPRDQELEARLVELETRLSFQEQALTELS 34 (78)
T ss_dssp ---CCTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777888888888876666665555554
No 94
>1got_G GT-gamma; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: a.137.3.1 PDB: 1tbg_E 2trc_G 1b9y_B 1b9x_B 1a0r_G*
Probab=20.55 E-value=58 Score=20.50 Aligned_cols=12 Identities=33% Similarity=0.697 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHH
Q 045244 46 EALKREIQRLRQ 57 (93)
Q Consensus 46 EaLkkEieRLk~ 57 (93)
+.+|++|++||.
T Consensus 20 ~~lr~~veqLr~ 31 (73)
T 1got_G 20 DKLKMEVDQLKK 31 (73)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 356667766664
No 95
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=20.08 E-value=67 Score=18.19 Aligned_cols=32 Identities=44% Similarity=0.546 Sum_probs=18.9
Q ss_pred ccchhhHHHHHhhhhhhhccccHHHHHHHHHH
Q 045244 3 VSVLSPRVAFLDHQRLLLNVDNSALKQRIAAL 34 (93)
Q Consensus 3 ~s~LSaqv~~L~qq~~~Ls~EN~~LKqRL~aL 34 (93)
+|.|--.|.-|..|-++|-..-++||.+..+|
T Consensus 3 vsalkekvsalkeqflmlmfkvsalkekvsal 34 (36)
T 3tq2_A 3 VSALKEKVSALKEQFLMLMFKVSALKEKVSAL 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555556666666666666666666665554
Done!