Query 045244
Match_columns 93
No_of_seqs 67 out of 69
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 19:53:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045244.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045244hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2oa5a1 d.362.1.1 (A:7-102) Un 61.7 0.9 6.6E-05 29.3 0.3 16 18-33 12-27 (96)
2 d1nkpb_ a.38.1.1 (B:) Max prot 44.9 15 0.0011 21.1 3.9 10 4-13 40-49 (83)
3 d1nkpa_ a.38.1.1 (A:) Myc prot 40.4 26 0.0019 20.1 4.6 10 45-54 75-84 (88)
4 d2e50a1 d.305.1.1 (A:1-222) Pr 39.8 44 0.0032 22.5 6.4 42 23-64 24-65 (222)
5 d2ayua1 d.305.1.1 (A:70-370) N 39.0 42 0.003 23.7 6.4 44 20-63 16-59 (301)
6 d1am9a_ a.38.1.1 (A:) SREBP-1a 36.8 11 0.00079 21.7 2.4 13 47-59 61-73 (80)
7 d2clyc1 f.45.1.1 (C:5-70) ATPa 34.0 11 0.00077 22.6 2.0 17 44-60 32-48 (66)
8 d1uklc_ a.38.1.1 (C:) SREBP-2 24.7 18 0.0013 19.9 1.8 26 3-28 25-53 (61)
9 d1vf7a_ f.46.1.1 (A:) Multidru 20.8 71 0.0052 19.5 4.3 22 16-37 40-61 (237)
10 d2ay0a1 a.43.1.11 (A:3-45) Bif 15.1 80 0.0058 17.0 3.1 27 25-51 10-42 (43)
No 1
>d2oa5a1 d.362.1.1 (A:7-102) Uncharacterized protein BQLF2 {Murid herpesvirus 4 [TaxId: 33708]}
Probab=61.69 E-value=0.9 Score=29.33 Aligned_cols=16 Identities=31% Similarity=0.526 Sum_probs=10.6
Q ss_pred hhhccccHHHHHHHHH
Q 045244 18 LLLNVDNSALKQRIAA 33 (93)
Q Consensus 18 ~~Ls~EN~~LKqRL~a 33 (93)
.-|.|||++||++|-+
T Consensus 12 ~rL~~ENk~LKkkl~~ 27 (96)
T d2oa5a1 12 ERLKLENKTLKQKVKS 27 (96)
T ss_dssp HHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHhc
Confidence 4577888888887754
No 2
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.95 E-value=15 Score=21.06 Aligned_cols=10 Identities=10% Similarity=0.484 Sum_probs=4.5
Q ss_pred cchhhHHHHH
Q 045244 4 SVLSPRVAFL 13 (93)
Q Consensus 4 s~LSaqv~~L 13 (93)
+.|..-|.|+
T Consensus 40 ~iL~~A~~yI 49 (83)
T d1nkpb_ 40 QILDKATEYI 49 (83)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444444554
No 3
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.44 E-value=26 Score=20.12 Aligned_cols=10 Identities=30% Similarity=0.664 Sum_probs=4.0
Q ss_pred HHHHHHHHHH
Q 045244 45 QEALKREIQR 54 (93)
Q Consensus 45 ~EaLkkEieR 54 (93)
++.|.+++..
T Consensus 75 ~~~L~~~l~~ 84 (88)
T d1nkpa_ 75 REQLKHKLEQ 84 (88)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3334444433
No 4
>d2e50a1 d.305.1.1 (A:1-222) Protein SET {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.80 E-value=44 Score=22.53 Aligned_cols=42 Identities=17% Similarity=0.199 Sum_probs=34.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 23 DNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQQNL 64 (93)
Q Consensus 23 EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~QQq~ 64 (93)
.-.+.|.+|++|..-+.=-+.+++...+|+-+|+..|.++-.
T Consensus 24 ~~~~~~~~i~~L~~iQ~e~~~l~~e~~~e~~~le~k~~~~~~ 65 (222)
T d2e50a1 24 SEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQ 65 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 335778889999888888888999999999999999987543
No 5
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.02 E-value=42 Score=23.75 Aligned_cols=44 Identities=11% Similarity=0.081 Sum_probs=37.1
Q ss_pred hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045244 20 LNVDNSALKQRIAALAQDKIFKDAHQEALKREIQRLRQVYHQQN 63 (93)
Q Consensus 20 Ls~EN~~LKqRL~aL~Qe~~lKda~~EaLkkEieRLk~ly~QQq 63 (93)
+..=....|.|+.+|..-+.=.+.+...+.+|+..|...|..+-
T Consensus 16 i~~Lp~~v~~rv~aLk~lq~e~~~le~~f~~e~~~LE~ky~~~~ 59 (301)
T d2ayua1 16 VGGLPKNVKEKLLSLKTLQSELFEVEKEFQVEMFELENKFLQKY 59 (301)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33445788999999999888889999999999999999988754
No 6
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.84 E-value=11 Score=21.72 Aligned_cols=13 Identities=38% Similarity=0.386 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHH
Q 045244 47 ALKREIQRLRQVY 59 (93)
Q Consensus 47 aLkkEieRLk~ly 59 (93)
.|+.|+..|+...
T Consensus 61 ~L~~e~~~lk~~~ 73 (80)
T d1am9a_ 61 KLKQENLSLRTAV 73 (80)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444433
No 7
>d2clyc1 f.45.1.1 (C:5-70) ATPase subunit F6 {Cow (Bos taurus) [TaxId: 9913]}
Probab=34.04 E-value=11 Score=22.61 Aligned_cols=17 Identities=41% Similarity=0.686 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045244 44 HQEALKREIQRLRQVYH 60 (93)
Q Consensus 44 ~~EaLkkEieRLk~ly~ 60 (93)
-+..|++|+.||...|+
T Consensus 32 ~~kel~~el~kl~~~YG 48 (66)
T d2clyc1 32 YQQDLDRELFKLKQMYG 48 (66)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHC
Confidence 35679999999999995
No 8
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.74 E-value=18 Score=19.91 Aligned_cols=26 Identities=23% Similarity=0.363 Sum_probs=10.8
Q ss_pred ccchhhHHHHH---hhhhhhhccccHHHH
Q 045244 3 VSVLSPRVAFL---DHQRLLLNVDNSALK 28 (93)
Q Consensus 3 ~s~LSaqv~~L---~qq~~~Ls~EN~~LK 28 (93)
|+.|.--+.|+ ..+...|..||..|+
T Consensus 25 a~iL~~Ai~YI~~Lq~~~~~L~~e~~~L~ 53 (61)
T d1uklc_ 25 SGVLRKAIDYIKYLQQVNHKLRQENMVLK 53 (61)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444 333333444443333
No 9
>d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.76 E-value=71 Score=19.54 Aligned_cols=22 Identities=9% Similarity=0.209 Sum_probs=14.7
Q ss_pred hhhhhccccHHHHHHHHHHHHH
Q 045244 16 QRLLLNVDNSALKQRIAALAQD 37 (93)
Q Consensus 16 q~~~Ls~EN~~LKqRL~aL~Qe 37 (93)
--.+..+++..+..++.....+
T Consensus 40 Gq~L~~ld~~~~~~~l~~a~a~ 61 (237)
T d1vf7a_ 40 GQQLYQIDPATYEADYQSAQAN 61 (237)
T ss_dssp TSEEEEECCHHHHHHHHHHHHH
T ss_pred CCEEEEEehHHHHhhhhhhhhh
Confidence 3456677888888777765443
No 10
>d2ay0a1 a.43.1.11 (A:3-45) Bifunctional protein putA {Escherichia coli [TaxId: 562]}
Probab=15.13 E-value=80 Score=17.05 Aligned_cols=27 Identities=26% Similarity=0.251 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHH------HHHHHHHHHHHHHH
Q 045244 25 SALKQRIAALAQD------KIFKDAHQEALKRE 51 (93)
Q Consensus 25 ~~LKqRL~aL~Qe------~~lKda~~EaLkkE 51 (93)
.++|.||+.+++. -++|+|.-.-|++|
T Consensus 10 d~~r~Ri~~lA~~~~RtpHWL~kqAI~~Yler~ 42 (43)
T d2ay0a1 10 DATRERIKSAATRIDRTPHWLIKQAIFSYLEQL 42 (43)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhc
Confidence 4789999999875 47888877766654
Done!