BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045248
(240 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 111/248 (44%), Gaps = 30/248 (12%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G L+EF V + +P ++ + + LP LTA A+ + G+ D + K +L+
Sbjct: 132 GTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLN-DKNCTGKRVLIL 190
Query: 74 AASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKT-----------PDG 122
ASGGVG +A+Q+ K + HVTA C E V+ LGAD+V+DYK+ P
Sbjct: 191 GASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFD 250
Query: 123 AALKSPSG----------RKYDAVIHCATGIPWSTFEPNLGTNGKVID--ITPGPSAMLT 170
L + G +K+ + P+ LG ++ +T G A+
Sbjct: 251 FILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKH 310
Query: 171 FALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDG 230
F K + + + LD + +LV GK++ VI P SK +A+ + G
Sbjct: 311 F-WKGVHYRWA-----FFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERG 364
Query: 231 HATGKIIV 238
HA GK ++
Sbjct: 365 HARGKTVI 372
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 17 AEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAAS 76
AE+ A + + + ++S + + LP AGLTA QAL Q A VK Q +L+ A +
Sbjct: 109 AEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQ-AEVK-----QGDVVLIHAGA 162
Query: 77 GGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDG-AALKSPSGRKYDA 135
GGVGH A+QLAK T V + RN F+K+LGA++ ++Y D A+ +P D
Sbjct: 163 GGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDL 222
Query: 136 V--------IHCATGIPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLL 187
V I C P + T G+VI++ LK+
Sbjct: 223 VGGDVGIQSIDCLKETGCIVSVPTI-TAGRVIEVAKQKHRRAFGLLKQFNI--------- 272
Query: 188 LIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239
E L +L KLV E KL+ I+ LS+A A GH GK++ +
Sbjct: 273 -----EELHYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFK 319
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 33/254 (12%)
Query: 1 MCNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVK 60
+C ++I H G AE+ V E++ +P +S E + +P+ LTA Q + GV+
Sbjct: 106 LCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVR 165
Query: 61 LDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARN-IEFVKSLGADEVLDYKT 119
++LV AA GV A+Q+AKL V A+ G+ + + K+LGADE ++Y
Sbjct: 166 -----PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTH 220
Query: 120 PD--GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDI---TPGPSAMLTFA-- 172
PD + G+ D V+ TG + NG I I + G L FA
Sbjct: 221 PDWPKEVRRLTGGKGADKVVD-HTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHV 279
Query: 173 -LKKLTF------SKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWA 225
++L+ SK +L P+L + V+EGKLK V+ PL A +
Sbjct: 280 FYRQLSILGSTMASKSRLFPIL------------RFVEEGKLKPVVGQVLPLEAAAEGHR 327
Query: 226 ESIDGHATGKIIVE 239
+ GK++++
Sbjct: 328 LLEERRVFGKVVLQ 341
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G AE+ V S +A P E L V+G TA+ +L + L G + K +LVT
Sbjct: 118 GSFAEYTVVPAS--IATPVPSVKPEYLTLLVSGTTAYISLKE-----LGGLSEGKKVLVT 170
Query: 74 AASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT-PDGAALKSPSGR 131
AA+GG G +A+QL+K HV +C + F+KSLG D ++YKT P G LK
Sbjct: 171 AAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPE 230
Query: 132 KYDAVIHCATGIPWSTFEPNLGTNGKVIDI 161
D V G + L T G++I I
Sbjct: 231 GVDVVYESVGGAMFDLAVDALATKGRLIVI 260
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G AE+ V S +A P E L V+G TA+ +L + L G + K +LVT
Sbjct: 97 GSFAEYTVVPAS--IATPVPSVKPEYLTLLVSGTTAYISLKE-----LGGLSEGKKVLVT 149
Query: 74 AASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT-PDGAALKSPSGR 131
AA+GG G +A+QL+K HV +C + F+KSLG D ++YKT P G LK
Sbjct: 150 AAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPE 209
Query: 132 KYDAVIHCATGIPWSTFEPNLGTNGKVIDI 161
D V G + L T G++I I
Sbjct: 210 GVDVVYESVGGAMFDLAVDALATKGRLIVI 239
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G AE+ V S +A P E L V+G TA+ +L + L G + K +LVT
Sbjct: 126 GSFAEYTVVPAS--IATPVPSVKPEYLTLLVSGTTAYISLKE-----LGGLSEGKKVLVT 178
Query: 74 AASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT-PDGAALKSPSGR 131
AA+GG G +A+QL+K HV +C + F+KSLG D ++YKT P G LK
Sbjct: 179 AAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPE 238
Query: 132 KYDAVIHCATGIPWSTFEPNLGTNGKVIDI 161
D V G + L T G++I I
Sbjct: 239 GVDVVYESVGGAMFDLAVDALATKGRLIVI 268
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 12/227 (5%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GG AE+ A V P +S E + + AG+T ++AL K+ G+ + + +
Sbjct: 118 GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKAL------KVTGAKPGEWVAIY 171
Query: 74 AASGGVGHYAVQLAK-LGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAA-LKSPSGR 131
GG+GH AVQ AK +G V G +E K LGAD V++ D A +K G
Sbjct: 172 GI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGG 230
Query: 132 KYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPK 191
+ AV+ + + + ++ G + + P M + K + ++
Sbjct: 231 VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGS--IVGT 288
Query: 192 RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238
R++L ++ EGK+KT+I + PL K + + + G G++++
Sbjct: 289 RKDLQEALQFAAEGKVKTIIEVQ-PLEKINEVFDRMLKGQINGRVVL 334
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 12/227 (5%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GG AE+ A V P +S E + + AG+T ++AL K+ G+ + + +
Sbjct: 118 GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKAL------KVTGAKPGEWVAIY 171
Query: 74 AASGGVGHYAVQLAK-LGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAA-LKSPSGR 131
GG GH AVQ AK +G V G +E K LGAD V++ D A +K G
Sbjct: 172 GI-GGFGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGG 230
Query: 132 KYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPK 191
+ AV+ + + + ++ G + + P M + K + ++
Sbjct: 231 VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGS--IVGT 288
Query: 192 RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238
R++L ++ EGK+KT+I + PL K + + + G G++++
Sbjct: 289 RKDLQEALQFAAEGKVKTIIEVQ-PLEKINEVFDRMLKGQINGRVVL 334
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 16/234 (6%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GG AE+A+A + + P ++ +G+ + + TA++AL SA VK +++LV
Sbjct: 123 GGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAG-----ESVLVH 177
Query: 74 AASGGVGHYAVQLAKLGNTHVTASCGARNIE-FVKSLGADEVLDYKTPDGA-ALKSPSGR 131
ASGGVG A Q+A+ + + G + V GA EV +++ + +K G
Sbjct: 178 GASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGE 237
Query: 132 K-YDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIP 190
K D +I + S L G+VI + G + + + ++ + L
Sbjct: 238 KGIDIIIEMLANVNLSKDLSLLSHGGRVIVV--GSRGTIEINPRDTMAKESSIIGVTLFS 295
Query: 191 --KRENLDFLVKL---VKEGKLKTVINSKHPLSKAEDAWAESIDGH-ATGKIIV 238
K E + L ++ G LK VI S++PL K +A I G ATGK+I+
Sbjct: 296 STKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMIL 349
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQ-KNIL 71
G AE+ + E P +SA + LP+ G+TA++ L G+ + + + K +L
Sbjct: 96 NGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLL 155
Query: 72 VTAASGGVGHYAVQLAK-LGNTHVTASCGARNIEFVKSLGADEVLDYK 118
+ +GGVG A Q+AK G +T + IE+ K +GAD VL++K
Sbjct: 156 IINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHK 203
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 104/245 (42%), Gaps = 25/245 (10%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G AEF + E +P + AE + LP+ +TA +A V G IL+
Sbjct: 119 GTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIV 178
Query: 74 AASGGVGHYAVQLAKLGNTHVTASCGAR--NIEFVKSLGADEVLDYKTPDGAALKSPSGR 131
+GGVG AVQ+A+ + +R E+VKSLGA V+D+ P A + + G
Sbjct: 179 GGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAA-LGL 237
Query: 132 KYDAVIHCATGIPWSTFEPN--LGTNGKVIDITPGPSAMLTFALKK--------LTFSKK 181
A + T E + G+ I PSA K+ L F++
Sbjct: 238 GAPAFVFSTTHTDKHAAEIADLIAPQGRFCLID-DPSAFDIXLFKRKAVSIHHELXFTR- 295
Query: 182 QLVPLLLIPKREN----LDFLVKLVKEGKLKTVI-NSKHPLSKAEDAWAESI--DGHATG 234
P P L+ + +LV EG+L+T + N P++ A A ++ G A G
Sbjct: 296 ---PXFGTPDXSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARG 352
Query: 235 KIIVE 239
K+++E
Sbjct: 353 KVVIE 357
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
Query: 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNIL 71
N GGLAE A+ K + + +P ++ E + + TA++ L G + Q N+L
Sbjct: 195 NFGGLAEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMK---QGDNVL 251
Query: 72 VTAASGGVGHYAVQLAKLGNTH-VTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSG 130
+ ASGG+G YA Q A G + + + E +S+GA+ ++D ++ G
Sbjct: 252 IWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRSMGAEAIID---------RNAEG 302
Query: 131 RKYDAVIHCATGIPWSTFEPNLG--TNGKVIDI 161
K+ H W F + T G+ IDI
Sbjct: 303 YKFWKDEHTQDPKEWKRFGKRIRELTGGEDIDI 335
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNIL 71
N GGLAE A+ K + + +P +S E + + TA++ L G G Q N+L
Sbjct: 177 NFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGA---GMKQGDNVL 233
Query: 72 VTAASGGVGHYAVQLAKLGNTH-VTASCGARNIEFVKSLGADEVLD 116
+ ASGG+G YA Q A G + + + E +++GA+ ++D
Sbjct: 234 IWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIID 279
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 23/240 (9%)
Query: 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNIL 71
NGG AE+ + + P A + + LP T L Q AG+ + +++L
Sbjct: 118 NGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQXAGLT-----EGESVL 172
Query: 72 VTAASGGVGHYAVQLAKLGNTHVTASCGAR-NIEFVKSLGADEVLDYKTPDGAA-LKSPS 129
+ + G+G A+QLA+ V A+ G+ E + LGA ++Y++ D AA +K+ +
Sbjct: 173 IHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAET 232
Query: 130 GRKYDAVIHCATGIPWSTFEPNLGTNGK-----VIDITPGPSA----MLTFALKKLTFSK 180
G+ D ++ I + FE N+ + K +I G A + +K+LT +
Sbjct: 233 GQGVDIILDX---IGAAYFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIXVKRLTVTG 289
Query: 181 KQLVPLLLIPKRENLDFLVK----LVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKI 236
P KR D L+ L++ G + VI+ DA +G GK+
Sbjct: 290 STXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKV 349
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 25/236 (10%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G L+E+ V E VA P + AAE S LP AGLTA AL + G + + +V
Sbjct: 142 GVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEK------GHLRAGDRVVV 195
Query: 74 AASGGVGHYAVQLAKLGNTHVTASCGARN-IEFVKSLGADEVLDYKTPDGAA-LKSPSG- 130
+GGV + +Q+AK V + +R ++ +LGAD ++ D + + +G
Sbjct: 196 QGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGD 255
Query: 131 RKYDAVIHCATGIPWSTFEPNLGTNGKVIDI-------TPGPSAMLTFALKKLTFSKKQL 183
R D ++ A G + +G++ I GP L K +
Sbjct: 256 RGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLL--------KSPV 307
Query: 184 VPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239
V + + R L+ LV V LK VI+ ++ ++ +A A +D GK+++E
Sbjct: 308 VQGISVGHRRALEDLVGAVDRLGLKPVIDXRYKFTEVPEALAH-LDRGPFGKVVIE 362
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNIL 71
N GGLAE+ V + S + +P+ ++ E + P+ TA++ L G ++ Q +L
Sbjct: 169 NFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMK---QGDIVL 225
Query: 72 VTAASGGVGHYAVQLAKL-GNTHVTASCGARNIEFVKSLGADEVLD 116
+ ASGG+G YA+Q K G V A+ V++LG D V++
Sbjct: 226 IWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVIN 271
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100
G+P GLTA+ L + GVK + +LV+AA+G VG Q+AKL V + G+
Sbjct: 127 GMP--GLTAYFGLLEVCGVK-----GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS 179
Query: 101 -RNIEFVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGK 157
I ++K +G D +YKT + ALK S YD G +T + GK
Sbjct: 180 DEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGK 239
Query: 158 VI------------DITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEG 205
+ + PGPS + K+L + + + L L+K V EG
Sbjct: 240 IAICGAISVYNRMDQLPPGPSPE-SIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEG 298
Query: 206 KLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238
K++ + A+ E ++G GK +V
Sbjct: 299 KIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 16/234 (6%)
Query: 14 GGLAEFAVAKESSTVARPSEVSA---AEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNI 70
GG AEF S + P ++S E + L AG+TA++A+ ++A G+
Sbjct: 135 GGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGA-----Y 189
Query: 71 LVTAASGGVGHYAVQLAKLGN--THVTASCGARNIEFVKSLGADEVLD-YKTPDGAALKS 127
+ GG+GH AVQL K+ T + ++ + LGAD V+D + P ++
Sbjct: 190 VAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMEL 249
Query: 128 PSGRKYDAVIHCATGIPWSTFEPN-LGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPL 186
GR + + + P LG G++I + G L F ++ S+
Sbjct: 250 TRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIV--GYGGELRFPTIRVISSEVSFEG- 306
Query: 187 LLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240
L+ L LV L +GK++ ++ H L + D G G+ ++ P
Sbjct: 307 SLVGNYVELHELVTLALQGKVRVEVDI-HKLDEINDVLERLEKGEVLGRAVLIP 359
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 5 WRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALT--QSAGVKLD 62
W + +H GGLAE A K VA P + A + + AG TA + + AGV+
Sbjct: 109 WGVGENH-WGGLAEQARVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVR-- 165
Query: 63 GSGQQKNILVTAASGGVGHYAVQLA-KLGNTHVTASCGARNIEFVKSLGADEVL 115
Q I+VT ASGGVG AV L KLG V S E++KSLGA VL
Sbjct: 166 --PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVL 217
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 13/232 (5%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G AE+ + + + +SA E + L +G+T ++A+ +++ LD S K ++V
Sbjct: 124 GAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKAS---LDPS---KTLVVI 177
Query: 74 AASGGVGHYAVQLAKL--GNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAA--LKSPS 129
A GG+G A+Q+AK G T + +E K GAD V++ + D + +
Sbjct: 178 GAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQ 237
Query: 130 GRKYDAVIHCATGIPWSTFEPN-LGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLL 188
G+ DAVI + P L GK + + A L + +T ++ Q + L+
Sbjct: 238 GKGADAVIDLNNSEKTLSIYPYVLAKQGKYVMVGLF-GADLKYHAPLITLNEVQFIGSLV 296
Query: 189 IPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240
+ + L + L + GK+K ++ L +A +A + A G+ ++ P
Sbjct: 297 GNQSDFLGIM-SLAEAGKVKPMVTKTMKLEEANEAIDNLENFKAVGRQVLVP 347
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 100/250 (40%), Gaps = 35/250 (14%)
Query: 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILV 72
GGG A++ E + P ++ + + +P A LTA Q L V+ +L+
Sbjct: 114 GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAG-----DYVLI 168
Query: 73 TAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPS 129
A GVG A+QL ++ + G+ + ++ + LGA +YK D A LK
Sbjct: 169 HAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTK 228
Query: 130 GRKYDAVIHCATGIPWSTFEPNLGTNGKVI--------DITPGPSAMLTFALKKLTFSKK 181
G + ++ C G W L +G+ + DI GP KL F +
Sbjct: 229 GAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDIN-GP------LFSKLLFKRG 281
Query: 182 QLVPLLLIPKRENL----------DFLVKLVKEG--KLKTVINSKHPLSKAEDAWAESID 229
L+ LL + L EG +L V++ +P+++ ++A
Sbjct: 282 SLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEA 341
Query: 230 GHATGKIIVE 239
GKI++E
Sbjct: 342 NKNIGKIVLE 351
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 100/250 (40%), Gaps = 35/250 (14%)
Query: 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILV 72
GGG A++ E + P ++ + + +P A LTA Q L V+ +L+
Sbjct: 98 GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAG-----DYVLI 152
Query: 73 TAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPS 129
A GVG A+QL ++ + G+ + ++ + LGA +YK D A LK
Sbjct: 153 HAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTK 212
Query: 130 GRKYDAVIHCATGIPWSTFEPNLGTNGKVI--------DITPGPSAMLTFALKKLTFSKK 181
G + ++ C G W L +G+ + DI GP KL F +
Sbjct: 213 GAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDIN-GP------LFSKLLFKRG 265
Query: 182 QLVPLLLIPKRENL----------DFLVKLVKEG--KLKTVINSKHPLSKAEDAWAESID 229
L+ LL + L EG +L V++ +P+++ ++A
Sbjct: 266 SLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEA 325
Query: 230 GHATGKIIVE 239
GKI++E
Sbjct: 326 NKNIGKIVLE 335
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 15/231 (6%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GG+AE A+ V P + E S + AG+T ++A+ S GVK G Q V
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVS-GVK-PGDWQ-----VI 169
Query: 74 AASGGVGHYAVQLAK--LGNTHVTASCGARNIEFVKSLGADEVLDYK--TPDGAALKSPS 129
+GG+G+ A+Q AK G + + K +GAD +++ P K
Sbjct: 170 FGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIINSGDVNPVDEIKKITG 229
Query: 130 GRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLL 188
G + I CA I + +L GK++ + P+ +T ++ + F + V L
Sbjct: 230 GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAL-PNTEMTLSVPTVVFDGVE-VAGSL 287
Query: 189 IPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239
+ R +L + EGK+K ++ ++ L + D E G G+++++
Sbjct: 288 VGTRLDLAEAFQFGAEGKVKPIVATRK-LEEINDIIDEMKAGKIEGRMVID 337
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 17 AEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAAS 76
A+FA ++P+ ++ + S LP+ +TA + L A V+ DG + +L+
Sbjct: 106 AQFAAVDARLLASKPAALTXRQASVLPLVFITAWEGLVDRAQVQ-DG----QTVLIQGGG 160
Query: 77 GGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAV 136
GGVGH A+Q+A V A+ ++E+V+ LGA + + P+ A + +G+ +D V
Sbjct: 161 GGVGHVAIQIALARGARVFATARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLV 220
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GG+AE A+ V P + E S + AG+T ++A+ S GVK G Q V
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVS-GVK-PGDWQ-----VI 169
Query: 74 AASGGVGHYAVQLAK--LGNTHVTASCGARNIEFVKSLGADEVLDYK--TPDGAALKSPS 129
+GG+G+ A+Q AK G + + K +GAD ++ P K
Sbjct: 170 FGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITG 229
Query: 130 GRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLL 188
G + I CA I + +L GK++ + P+ +T ++ + F + V L
Sbjct: 230 GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAV-PNTEMTLSVPTVVFDGVE-VAGSL 287
Query: 189 IPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239
+ R +L + EGK+K ++ ++ L + D E G G+++++
Sbjct: 288 VGTRLDLAEAFQFGAEGKVKPIVATRK-LEEINDIIDEMKAGKIEGRMVID 337
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 93/238 (39%), Gaps = 16/238 (6%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G +E V E++ V VS + + L + GLT L Q+ VK + IL
Sbjct: 93 GAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVK-----PGEIILFH 147
Query: 74 AASGGVGHYAVQLAK-LGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGA--ALKSPSG 130
AA+GGVG A Q AK LG + K+LGA E +DY D A L+ G
Sbjct: 148 AAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDG 207
Query: 131 RKYDAVIHCATGIPWSTFEPNLGTNGKVIDI--TPGPSAMLTFALKKLTFSKKQLVPLL- 187
+K V W T ++ G V+ GP + + + S P L
Sbjct: 208 KKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLG 267
Query: 188 -LIPKRENL----DFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240
+NL D L ++ GKLK ++ L A A E TG I+ P
Sbjct: 268 SYANNAQNLQTMADELFDMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP 325
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100
G+P GLTA+ L + GVK + ++V AA+G VG Q+AKL V + G+
Sbjct: 122 GMP--GLTAYFGLLEICGVK-----GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGS 174
Query: 101 -RNIEFVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVIHCATG 142
+ +++ LG D V +YKT + LK S YD G
Sbjct: 175 DEKVAYLQKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGG 219
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100
G+P GLTA+ L + GVK + ++V AA+G VG Q+AKL V + G+
Sbjct: 143 GMP--GLTAYFGLLEICGVK-----GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGS 195
Query: 101 -RNIEFVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVIHCATG 142
+ +++ LG D V +YKT + LK S YD G
Sbjct: 196 DEKVAYLQKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGG 240
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 34/218 (15%)
Query: 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100
G+P G+TA+ + K + + + V+AASG VG Q AK+ +V S G+
Sbjct: 135 GMP--GMTAYAGFHEVCSPK-----KGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGS 187
Query: 101 RN-IEFVKS-LGADEVLDYKTPD--GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNG 156
+ ++ +KS G DE +YK AALK D G N+ G
Sbjct: 188 KEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYG 247
Query: 157 KV----------IDITPGPSAMLTFALKK------LTFSKKQLVPLLLIPKRENLDFLVK 200
++ ++ T G + K+ L F L P + L+ ++
Sbjct: 248 RIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYP-------KYLEMVIP 300
Query: 201 LVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238
+K GK+ V + H L A A G GK +V
Sbjct: 301 QIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVV 338
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100
GLP+ +A Q T S V +LV S +Q+ +L A+C
Sbjct: 148 GLPLPSPSADQPPTHSKPVY---------VLVYGGSTATATVTMQMLRLSGYIPIATCSP 198
Query: 101 RNIEFVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVIHCATGIPWSTF 148
N + KS GA+EV DY+ P+ A +++ + + C T + +TF
Sbjct: 199 HNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTF 247
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100
GLP+ +A Q T S V +LV S +Q+ +L A+C
Sbjct: 148 GLPLPSPSADQPPTHSKPVY---------VLVYGGSTATATVTMQMLRLSGYIPIATCSP 198
Query: 101 RNIEFVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVIHCATGIPWSTF 148
N + KS GA+EV DY+ P+ A +++ + + C T + +TF
Sbjct: 199 HNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTF 247
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 5 WRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALT--QSAGVKLD 62
W + +H GGLAE A K VA P+ +S+ + AG TA + + AG++
Sbjct: 88 WGVGENH-WGGLAERARVKGDWLVALPAGLSSRNAXIIGTAGFTAXLCVXALEDAGIR-- 144
Query: 63 GSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIE-FVKSLGADEVL 115
Q ++VT ASGGVG AV L V A G + ++KSLGA+ +L
Sbjct: 145 --PQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRIL 196
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 30/237 (12%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GG AE+ +A + P V AE + + AG+T ++ L Q+ + + +
Sbjct: 124 GGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQT-------NARPGQWVAI 176
Query: 74 AASGGVGHYAVQLAKLGNTHVTA-SCGARNIEFVKSLGADEVLDYKTPDGA-ALKSPSGR 131
+ GG+GH AVQ A+ HV A +E + LGA ++ + D A++ G
Sbjct: 177 SGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGG 236
Query: 132 KYDAVIHCATGIPWSTFEPNLGTNGK-----VIDITPG--PSAMLTFALKKLTFSKKQLV 184
+ ++ T + S F +G + ++ + PG P+ + LK L +
Sbjct: 237 AHGVLV---TAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGS--- 290
Query: 185 PLLLIPKRENLDFLVKLVKEGKLKTVINSKHP--LSKAEDAWAESIDGHATGKIIVE 239
++ R +L + EG +K I HP L + G G+I++E
Sbjct: 291 ---IVGTRADLQEALDFAGEGLVKATI---HPGKLDDINQILDQMRAGQIEGRIVLE 341
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 20/211 (9%)
Query: 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100
G+P G+TA+ + K + + + V+AASG VG QLAK+ +V S G+
Sbjct: 137 GMP--GMTAYAGFYEVCSPK-----EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS 189
Query: 101 RN-IEFVKS-LGADEVLDYKTPDG--AALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNG 156
+ ++ +K+ G D+ +YK AALK D G N+ +G
Sbjct: 190 KEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHG 249
Query: 157 KV-----IDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKREN----LDFLVKLVKEGKL 207
++ I + L + + + ++ ++ + L+F++ ++EGK+
Sbjct: 250 RIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKI 309
Query: 208 KTVINSKHPLSKAEDAWAESIDGHATGKIIV 238
V + L KA +A G GK +V
Sbjct: 310 TYVEDVADGLEKAPEALVGLFHGKNVGKQVV 340
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 5 WRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGS 64
+ I V+H GG +E+A V P ++ E + AG TA ++ +L+
Sbjct: 91 YEIGVTHFGG-YSEYARLHGEWLVPLPKGLTLKEAXAIGTAGFTAALSIH-----RLEEH 144
Query: 65 G---QQKNILVTAASGGVGHYAVQ-LAKLGNTHVTASCG-ARNIEFVKSLGADEVL 115
G ++ +LVT A+GGVG AV LAK G T V AS G A ++++ LGA EVL
Sbjct: 145 GLTPERGPVLVTGATGGVGSLAVSXLAKRGYT-VEASTGKAAEHDYLRVLGAKEVL 199
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 28/127 (22%)
Query: 40 SGLPVAGLTAHQALTQSAGVKLDGSGQQKN---ILVTAASGGVGHYAVQLAKLGNTHVTA 96
S L + G+TA+ AL LD GQ KN ++++ A+G VG A Q+A+L V
Sbjct: 128 SALGMTGMTAYFAL-------LD-VGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVG 179
Query: 97 -SCGARNIEF-VKSLGADEVLDYKTPDGAA-LKSPSGRKYDAVIHCATGIPWSTFEPNLG 153
+ GA F V+ LG D +DYK D AA LK C GI F N+G
Sbjct: 180 IAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKR----------ECPKGI--DVFFDNVG 227
Query: 154 TNGKVID 160
G+++D
Sbjct: 228 --GEILD 232
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 22/240 (9%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GG AE S+ + P ++ AE L T + A + ++ + +LV
Sbjct: 112 GGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLR-----AGETVLVL 166
Query: 74 AASGGVGHYAVQLAK-LGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPS-GR 131
A+GG+G A+Q+AK +G + EFVKS+GAD VL + A++ + G
Sbjct: 167 GAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGA 226
Query: 132 KYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPL----L 187
D V+ G + L + G+++ + + T + +L L+ +
Sbjct: 227 GVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEF 286
Query: 188 LIPKRENLDFLV-------KLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240
L R + D+L KLV EG ++ ++++ PLS+ A + DG GK+++ P
Sbjct: 287 L---RTHADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP 342
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 19 FAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGG 78
AVA P+ S A + +P+ LTA+ AL AG++ +++LV +A+GG
Sbjct: 303 LAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLR-----PGESLLVHSAAGG 357
Query: 79 VGHYAVQLAKLGNTHVTASCGARNIEFV----KSLGADEVLDYKTPDGAALKSPSGRKYD 134
VG A+QLA+ V A+ + V + L + D++ L + GR D
Sbjct: 358 VGMAAIQLARHLGAEVYATASEDKWQAVELSREHLASSRTCDFEQ---QFLGATGGRGVD 414
Query: 135 AVIHCATG 142
V++ G
Sbjct: 415 VVLNSLAG 422
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 34/240 (14%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GG AE+ VA + P + E + + AG+T ++ L + + + +V
Sbjct: 143 GGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGLKVT-------DTKPGDWVVI 195
Query: 74 AASGGVGHYAVQLAKLGNTHVTA-SCGARNIEFVKSLGADEVLDYKT---PDGAALKSPS 129
+ GG+GH AVQ A+ +V A R ++ + LGA ++ KT P K
Sbjct: 196 SGIGGLGHMAVQYARAMGLNVAAVDIDDRKLDLARRLGATVTVNAKTVADPAAYIRKETD 255
Query: 130 GRKYDAVIHCATGIPWSTFEPNLG--TNGKVIDIT---PG--PSAMLTFALKKLTFSKKQ 182
G ++ T + FE LG G + + PG P ++ L +T
Sbjct: 256 GGAQGVLV---TAVSPKAFEQALGMVARGGTVSLNGLPPGDFPLSIFNMVLNGVTVRGSI 312
Query: 183 LVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESID---GHATGKIIVE 239
+ L + +E+LDF +GK+K I + K ED A D G+ G+I+++
Sbjct: 313 VGTRLDL--QESLDF----AADGKVKATIQT----GKLEDINAIFDDMRQGNIEGRIVMD 362
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 45/242 (18%)
Query: 31 PSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQL-AKL 89
P ++S +E + P+ +TA+ L + A ++ + ++LV +A GGVG QL + +
Sbjct: 112 PDDMSFSEAAAFPMNFVTAYVMLFEVANLR-----EGMSVLVHSAGGGVGQAVAQLCSTV 166
Query: 90 GNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCA----TGIPW 145
N V + E +K + D +K S D V+ C TG
Sbjct: 167 PNVTVFGTASTFKHEAIKD-SVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGL 225
Query: 146 STFEPNLGTNGKVIDITPGPSAMLT------FALKKLTFSKKQLVPLLLIPKRE------ 193
S +P LGT I G S M+T F+ K + +++ P+ L + +
Sbjct: 226 SLLKP-LGTY-----ILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFS 279
Query: 194 --NLDF--------------LVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKII 237
NL F L+ L + K+K V++S L + ++A D GK+I
Sbjct: 280 LLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLI 339
Query: 238 VE 239
++
Sbjct: 340 LD 341
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 112/235 (47%), Gaps = 30/235 (12%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GGLAE + + + P +S E + PV+ LTA+ AL ++ + + +LV
Sbjct: 79 GGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ------ARPGEKVLVQ 132
Query: 74 AASGGVGHYAVQLAK-LGNTHVTASCGARNIEFVKSLGADEVLDY-KTPDGAALKSPSGR 131
AA+G +G AVQ+A+ +G + A+ + +LGA+E Y + P+ A K+ G
Sbjct: 133 AAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERA--KAWGG- 189
Query: 132 KYDAVIHCATGIPWSTFEPNLGT---NGKVIDITPGPSAMLTFALKKLTFSKKQLVPLL- 187
D V+ E +LG G+++ I P P L + L L PLL
Sbjct: 190 -LDLVLEVRG----KEVEESLGLLAHGGRLVYIAPIPP--LRLMRRNLAVLGFWLTPLLR 242
Query: 188 ---LIPKRENLDFLV-KLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238
L+ E L FL+ +L +E L+ V+ P ++AE A+ +D TGK++V
Sbjct: 243 EGALV--EEALGFLLPRLGRE--LRPVVGPVFPFAEAEAAFRALLDRGHTGKVVV 293
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 18/192 (9%)
Query: 31 PSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKL- 89
P ++ E + VA LTA +L + + + +L+ +A+GGVG AV +AK+
Sbjct: 8 PDTLADNEAATFGVAYLTAWHSLCEVGRLS-----PGERVLIHSATGGVGMAAVSIAKMI 62
Query: 90 -GNTHVTASCGARNIEFVKSLGADEVLDYKTPDGA--ALKSPSGRKYDAVIHCATGIPWS 146
+ TA A+ E + LG + V D ++ D A L+ G D V++ G
Sbjct: 63 GARIYTTAGSDAKR-EMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQ 121
Query: 147 TFEPNLGTNGKVI-----DITPGPSAMLTFALKKLTFSKKQL-VPLLLIPK--RENLDFL 198
L G+ I D+ S L K +FS L + L L P R+ L +
Sbjct: 122 RGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHI 181
Query: 199 VKLVKEGKLKTV 210
++ V +GKL+ +
Sbjct: 182 LQHVADGKLEVL 193
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 40 SGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK-LGNTHVTASC 98
+GL + G+TA L Q+ VK +L+ AA+GG+GH V A+ LG T +
Sbjct: 124 AGLMLKGMTAQYLLHQTHKVK-----PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS 178
Query: 99 GARNIEFVKSLGADEVLDYKTPDGA 123
E + LG ++Y T D A
Sbjct: 179 TEEKAETARKLGCHHTINYSTQDFA 203
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 18/184 (9%)
Query: 70 ILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD--GAALK 126
+L+ AA+GGVG QL K+ H A ++ K GA+ +++ D LK
Sbjct: 152 VLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLK 211
Query: 127 SPSGRKYDAVIHCATGIPWSTFEPNLG---------TNGKVIDITPGPSAMLTFALKKLT 177
+G+ DA + TFE +L + G + P P ++ + K +T
Sbjct: 212 FTNGKGVDASFDS---VGKDTFEISLAALKRKGVFVSFGNASGLIP-PFSITRLSPKNIT 267
Query: 178 FSKKQLVPLLLIPK--RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGK 235
+ QL + P+ + D LV KL I +PL A A+ GK
Sbjct: 268 LVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGK 327
Query: 236 IIVE 239
+++E
Sbjct: 328 LVLE 331
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G AE+ + + + ++A E + L +G+T ++A+ +++ LD + K +LV
Sbjct: 124 GAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS---LDPT---KTLLVV 177
Query: 74 AASGGVGHYAVQLAKL--GNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAA--LKSPS 129
A GG+G AVQ+AK G T + +E K GAD V++ D A +
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE 237
Query: 130 GRKYDAVIHC-ATGIPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLL 188
+ DAVI + S + L GK + + A L + +T S+ Q V L+
Sbjct: 238 SKGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLF-GADLHYHAPLITLSEIQFVGSLV 296
Query: 189 IPKRENLDFL--VKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240
DFL ++L + GK+K +I L +A +A + A G+ ++ P
Sbjct: 297 ---GNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 17/234 (7%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G AE+ + + + ++A E + L +G+T ++A+ +++ LD + K +LV
Sbjct: 124 GAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS---LDPT---KTLLVV 177
Query: 74 AASGGVGHYAVQLAKL--GNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAA--LKSPS 129
A GG+G AVQ+AK G T + +E K GAD V++ D A +
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE 237
Query: 130 GRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLL 188
+ DAVI S + L GK + + A L + +T S+ Q V L+
Sbjct: 238 SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLF-GADLHYHAPLITLSEIQFVGSLV 296
Query: 189 IPKRENLDFL--VKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240
DFL ++L + GK+K +I L +A +A + A G+ ++ P
Sbjct: 297 ---GNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G AE+ + + + ++A E + L +G+T ++A+ +++ LD + K +LV
Sbjct: 124 GAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS---LDPT---KTLLVV 177
Query: 74 AASGGVGHYAVQLAKL--GNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAA--LKSPS 129
A GG+G AVQ+AK G T + +E K GAD V++ D A +
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE 237
Query: 130 GRKYDAVIHC-ATGIPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLL 188
+ DAVI + S + L GK + + A L + +T S+ Q V L+
Sbjct: 238 SKGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLF-GADLHYHAPLITLSEIQFVGSLV 296
Query: 189 IPKRENLDFL--VKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240
DFL ++L + GK+K +I L +A +A + A G+ ++ P
Sbjct: 297 ---GNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 93/235 (39%), Gaps = 26/235 (11%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GG E+ VA + P +V E + + AG+T ++ L + + +V
Sbjct: 120 GGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVT-------DTRPGQWVVI 172
Query: 74 AASGGVGHYAVQLAKLGNTHVTA-SCGARNIEFVKSLGADEVLDYKTPDGAA-LKSPSGR 131
+ GG+GH AVQ A+ V A + + LGA+ ++ + D AA L+ G
Sbjct: 173 SGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGG 232
Query: 132 KYDAVIHCATGIPWSTFEPNLGT--NGKVIDITPGP-----SAMLTFALKKLTFSKKQLV 184
+ ++ T + F +G G I + P + + LK +T
Sbjct: 233 AHGVLV---TAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGS--- 286
Query: 185 PLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239
++ R +L + G +K +++ L D + +G G+++++
Sbjct: 287 ---IVGTRSDLQESLDFAAHGDVKATVSTAK-LDDVNDVFGRLREGKVEGRVVLD 337
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 19/216 (8%)
Query: 31 PSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLG 90
P+ +S + + + GLT + L ++ +K D + L AA+GGVG A Q AK
Sbjct: 110 PAAISFEQAAASFLKGLTVYYLLRKTYEIKPD-----EQFLFHAAAGGVGLIACQWAKAL 164
Query: 91 NTHVTASCG-ARNIEFVKSLGADEVLDYKTPDGAA-LKSPSGRKYDAVIHCATGI-PWST 147
+ + G A+ + GA +V++Y+ D LK +G K V++ + G W
Sbjct: 165 GAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWER 224
Query: 148 FEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLV--PLL--LIPKRENL----DFLV 199
L G ++ A+ L L V P L I RE L + L
Sbjct: 225 SLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELF 284
Query: 200 KLVKEGKLKTVI--NSKHPLSKAEDAWAESIDGHAT 233
L+ G +K + K+PL A+ A E ++ AT
Sbjct: 285 SLIASGVIKVDVAEQQKYPLKDAQRA-HEILESRAT 319
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKL 61
C + S GG AE+ V K + A P+++ +G+ + + H L
Sbjct: 103 CAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLH-------AFHL 155
Query: 62 DGSGQQKNILVTAASGGVGHYAVQLA-KLGNTHVTA-SCGARNIEFVKSLGADEVLDYKT 119
+ KN+++ A G +G A+Q A LG VTA + + KS GA + +
Sbjct: 156 AQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE 214
Query: 120 PDGAALKSPSGR-KYDAVIHCATGIP 144
++S +++ +I G+P
Sbjct: 215 MSAPQMQSVLRELRFNQLILETAGVP 240
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G ++A A P A+ + + AG+T ++AL +SA + +G + ++
Sbjct: 123 GSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKAL-KSANLM---AGHW--VAIS 176
Query: 74 AASGGVGHYAVQLAK-LGNTHVTASCGARNIEFVKSLGADEVLDY-KTPD--GAALKSPS 129
A+GG+G AVQ AK +G + G E +S+G + +D+ K D GA LK+
Sbjct: 177 GAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATD 236
Query: 130 G 130
G
Sbjct: 237 G 237
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 113/242 (46%), Gaps = 37/242 (15%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GGLAE + + + P +S E + PV+ LTA+ AL ++ + + +LV
Sbjct: 79 GGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ------ARPGEKVLVQ 132
Query: 74 AASGGVGHYAVQLAK-LGNTHVTASCGARNIEFVKSLGADEVLDY-KTPDGAALKSPSGR 131
AA+G +G AVQ+A+ +G + A+ + +LGA+E Y + P+ A K+ G
Sbjct: 133 AAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERA--KAWGG- 189
Query: 132 KYDAVIHCATGIPWSTFEPNLGT---NGKVI-------DITPGPSAMLTFALKKLTFSKK 181
D V+ E +LG G+++ ++ P P L + L
Sbjct: 190 -LDLVLEVRG----KEVEESLGLLAHGGRLVYIGAAEGEVAPIPP--LRLMRRNLAVLGF 242
Query: 182 QLVPLL----LIPKRENLDFLV-KLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKI 236
L PLL L+ E L FL+ +L +E L+ V+ P ++AE A+ +D TGK+
Sbjct: 243 WLTPLLREGALV--EEALGFLLPRLGRE--LRPVVGPVFPFAEAEAAFRALLDRGHTGKV 298
Query: 237 IV 238
+V
Sbjct: 299 VV 300
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 58/141 (41%), Gaps = 16/141 (11%)
Query: 4 LWRI-DVSHNG----GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAG 58
+W DV NG GG A+ V + V P ++ + + L AG+T + L+
Sbjct: 118 IWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHF-- 175
Query: 59 VKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVT--ASCGARNIEFVKSLGADEVLD 116
G Q GGVGH V++AK HVT +S + E ++ LGAD D
Sbjct: 176 ----GLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGAD---D 228
Query: 117 YKTPDGAALKSPSGRKYDAVI 137
Y A S D VI
Sbjct: 229 YVIGSDQAKMSELADSLDYVI 249
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GGLAE + + + P +S E + PV+ LTA+ AL ++ + + +LV
Sbjct: 79 GGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ------ARPGEKVLVQ 132
Query: 74 AASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEVLDY-KTPDGA 123
AA+G +G AVQ+A+ V A+ + +LGA+E Y + P+ A
Sbjct: 133 AAAGALGTAAVQVARAXGLRVLAAASRPEKLALPLALGAEEAATYAEVPERA 184
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 100/241 (41%), Gaps = 22/241 (9%)
Query: 15 GLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQ-KNILVT 73
GLA + + +T PS + E + +P+ TA+ +L + G Q +++L+
Sbjct: 1621 GLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLV------VRGRMQPGESVLIH 1674
Query: 74 AASGGVGHYAVQLAKLGNTHVTASCGA---RNIEFVKSLGADEVLDYKTPDGA----ALK 126
+ SGGVG A+ +A V + G+ R + DE + D + L+
Sbjct: 1675 SGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLR 1734
Query: 127 SPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVI-----DITPGPSAMLTFALKKLTFSKK 181
+G+ D V++ L +G+ + D++ + + LK +TF
Sbjct: 1735 HTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGI 1794
Query: 182 QLVPLLL---IPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238
L L +E + L ++EG ++ + + P +K E A+ G GK+++
Sbjct: 1795 LLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVI 1854
Query: 239 E 239
+
Sbjct: 1855 Q 1855
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 17/234 (7%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
G AE+ + + ++A E + L +G+T ++A+ +++ LD + K +LV
Sbjct: 124 GAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKAS---LDPT---KTLLVV 177
Query: 74 AASGGVGHYAVQLAKL--GNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAA--LKSPS 129
A GG+G AVQ+AK G T + +E K GAD V++ D A +
Sbjct: 178 GAGGGLGTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITE 237
Query: 130 GRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLL 188
+ DAVI S + L GK + + A L + +T S+ Q V L+
Sbjct: 238 SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVXVGLF-GADLHYHAPLITLSEIQFVGSLV 296
Query: 189 IPKRENLDFL--VKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240
DFL +L + GK+K I L +A +A + A G+ ++ P
Sbjct: 297 ---GNQSDFLGIXRLAEAGKVKPXITKTXKLEEANEAIDNLENFKAIGRQVLIP 347
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 31/212 (14%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73
GG A + E V P + + + L GLT + L ++ G G++ I+
Sbjct: 133 GGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGC----GPGKKVGIVGL 188
Query: 74 AASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPS-GRK 132
G +G + +G S +R E +GAD + A L+ G K
Sbjct: 189 GGIGSMG--TLISKAMGAETYVISRSSRKREDAMKMGADHYI-------ATLEEGDWGEK 239
Query: 133 Y----DAVIHCA---TGIPWSTFEPNLGTNGKVIDIT-PGPSAMLT---FALKKLTFSKK 181
Y D ++ CA T I ++ + G+++ I+ P ML+ + LK ++ S
Sbjct: 240 YFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYS 299
Query: 182 QLVPLLLIPKRENLDFLVKLVKEGKLKTVINS 213
L + + L+ L+KLV E +K + +
Sbjct: 300 ALGSI------KELNQLLKLVSEKDIKIWVET 325
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 9 VSHNG----GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGS 64
+ H+G GG + VA E + P + G+ L AG+T + L LD
Sbjct: 131 IYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFG---LDEP 187
Query: 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVT--ASCGARNIEFVKSLGADEVL 115
G+ I+ G H AV+ AK + VT ++ ++ E +K+ GAD L
Sbjct: 188 GKHIGIVGLGGLG---HVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL 237
>pdb|3OC5|A Chain A, Crystal Structure Of The Vibrio Cholerae Secreted
Colonization Factor Tcpf
Length = 318
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Query: 168 MLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKH 215
+ F L + TF + IP R+ ++ LV EGKL T +N ++
Sbjct: 95 YIDFYLAQTTFDWE-------IPTRDQIETLVNYANEGKLSTALNQEY 135
>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida
Tropicalis Peroxisomal Multifunctional Enzyme Type 2
Length = 604
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 66 QQKNILVTAASGGVG-HYAVQLAKLGNTHVTASC-GARNIEFVKSLGADEVLDYKTPDG 122
+ K +++T A GG+G +Y+++ AKLG V GA N + S AD V+D +G
Sbjct: 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 15/244 (6%)
Query: 5 WRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGS 64
+ + VS +GG L+E+A V P +S E AG TA ++ +L+ +
Sbjct: 92 YELGVSRDGG-LSEYASVPGDWLVPLPQNLSLKEAXVYGTAGFTAALSVH-----RLEQN 145
Query: 65 G---QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARN-IEFVKSLGADEVLDYKTP 120
G ++ ++LVT A+GGVG AV V AS G R +++K LGA EV+ +
Sbjct: 146 GLSPEKGSVLVTGATGGVGGIAVSXLNKRGYDVVASTGNREAADYLKQLGASEVISREDV 205
Query: 121 DGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVI--DITPG---PSAMLTFALKK 175
LK+ S +++ + G ++ + G V +T G P+ + F L+
Sbjct: 206 YDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRG 265
Query: 176 LTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGK 235
++ V + + +K +L T+++ + L + A + + G+
Sbjct: 266 VSLLGIDSVYCPXDVRAAVWERXSSDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGR 325
Query: 236 IIVE 239
+IV+
Sbjct: 326 VIVK 329
>pdb|2QZV|A Chain A, Draft Crystal Structure Of The Vault Shell At 9 Angstroms
Resolution
pdb|2QZV|B Chain B, Draft Crystal Structure Of The Vault Shell At 9 Angstroms
Resolution
Length = 873
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 189 IPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESI 228
IP +N V+ VK GK++ VI S + L++ E W + +
Sbjct: 392 IPLDQNEGIYVQDVKTGKVRAVIGSTYMLTQDEVLWEKEL 431
>pdb|2ZUO|A Chain A, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|B Chain B, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|C Chain C, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|D Chain D, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|E Chain E, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|F Chain F, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|G Chain G, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|H Chain H, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|I Chain I, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|J Chain J, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|K Chain K, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|L Chain L, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|M Chain M, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|N Chain N, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|O Chain O, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|P Chain P, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|Q Chain Q, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|R Chain R, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|S Chain S, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|T Chain T, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|U Chain U, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|V Chain V, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|W Chain W, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|X Chain X, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|Y Chain Y, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|Z Chain Z, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|AA Chain a, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|BB Chain b, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|CC Chain c, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|DD Chain d, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|EE Chain e, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|FF Chain f, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|GG Chain g, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|HH Chain h, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|II Chain i, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|JJ Chain j, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|KK Chain k, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|LL Chain l, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|MM Chain m, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
Length = 861
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 189 IPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESI 228
IP +N V+ VK GK++ VI S + L++ E W + +
Sbjct: 380 IPLDQNEGIYVQDVKTGKVRAVIGSTYMLTQDEVLWEKEL 419
>pdb|2L29|A Chain A, Complex Structure Of E4 Mutant Human Igf2r Domain 11 Bound
To Igf-Ii
pdb|2L2A|A Chain A, Mutated Domain 11 Of The Cytoplasmic Region Of The
Cation-Independent Mannose-6-Phosphate Receptor
Length = 142
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 18/93 (19%)
Query: 45 AGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIE 104
AG TA A ++S V + G+ +N GVG A G T ++ + +
Sbjct: 29 AGFTA--AYSKSGVVYMSICGENEN-----CPPGVG------ACFGQTRISVGKANKRLR 75
Query: 105 FVKSLGADEVLDYKTPDGAALKSPSGRKYDAVI 137
+V D+VL DG+ S SG Y +VI
Sbjct: 76 YV-----DQVLQLVYKDGSPCPSKSGLSYKSVI 103
>pdb|1EUZ|A Chain A, Glutamate Dehydrogenase From Thermococcus Profundus In The
Unligated State
pdb|1EUZ|B Chain B, Glutamate Dehydrogenase From Thermococcus Profundus In The
Unligated State
pdb|1EUZ|C Chain C, Glutamate Dehydrogenase From Thermococcus Profundus In The
Unligated State
pdb|1EUZ|D Chain D, Glutamate Dehydrogenase From Thermococcus Profundus In The
Unligated State
pdb|1EUZ|E Chain E, Glutamate Dehydrogenase From Thermococcus Profundus In The
Unligated State
pdb|1EUZ|F Chain F, Glutamate Dehydrogenase From Thermococcus Profundus In The
Unligated State
Length = 419
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 77 GGVGHYAVQLAK--LGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSP 128
G G+Y +LAK LG T V S I L DEVL +K G+ P
Sbjct: 221 GNAGYYTAKLAKEQLGMTVVAVSDSRGGIYNPDGLDPDEVLKWKREHGSVKDFP 274
>pdb|4G1H|A Chain A, Group B Streptococcus Pilus Island 1 Sortase C2
Length = 215
Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 38 EGSGLPVAGLTAHQALTQSAGV 59
EG+ LPV GL+ H LT G+
Sbjct: 97 EGTSLPVGGLSTHSVLTAHRGL 118
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 55/161 (34%), Gaps = 30/161 (18%)
Query: 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQA-----LTQSAGVKLDGSGQQK 68
G AEF V P +S + LP LTA QA LT+ V + G G
Sbjct: 96 GSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVN 155
Query: 69 NILVTAASGGVGHYAVQLAKLGNTH-VTASCGARNIEFVKSLGADEVLDYKTPDGAALKS 127
N + Y V L + + A G R++ Y+ P S
Sbjct: 156 N--LLTQXLNNAGYVVDLVSASLSQALAAKRGVRHL-------------YREP------S 194
Query: 128 PSGRKYDAVIHCATGIPWSTFEPNLGTNGKVI---DITPGP 165
+KY A+ + P+L NG +I D P P
Sbjct: 195 QVTQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDRIPAP 235
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,321,635
Number of Sequences: 62578
Number of extensions: 296165
Number of successful extensions: 878
Number of sequences better than 100.0: 78
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 783
Number of HSP's gapped (non-prelim): 81
length of query: 240
length of database: 14,973,337
effective HSP length: 96
effective length of query: 144
effective length of database: 8,965,849
effective search space: 1291082256
effective search space used: 1291082256
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 50 (23.9 bits)