Query 045248
Match_columns 240
No_of_seqs 130 out of 1786
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 11:18:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045248.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045248hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 1.6E-42 3.5E-47 274.4 14.8 228 1-240 107-337 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 3E-39 6.5E-44 261.1 17.5 224 12-240 93-326 (326)
3 KOG1197 Predicted quinone oxid 100.0 6.5E-37 1.4E-41 228.2 14.7 231 5-240 90-330 (336)
4 KOG1198 Zinc-binding oxidoredu 100.0 6.9E-36 1.5E-40 241.7 19.1 226 9-240 99-345 (347)
5 KOG0024 Sorbitol dehydrogenase 100.0 1.3E-35 2.9E-40 229.0 15.8 228 2-239 111-351 (354)
6 KOG0023 Alcohol dehydrogenase, 100.0 2.2E-35 4.8E-40 227.3 13.7 229 1-240 115-354 (360)
7 PRK09880 L-idonate 5-dehydroge 100.0 4.7E-34 1E-38 234.3 18.4 217 12-240 122-343 (343)
8 TIGR02822 adh_fam_2 zinc-bindi 100.0 2E-33 4.3E-38 229.1 19.2 220 2-238 107-328 (329)
9 cd08239 THR_DH_like L-threonin 100.0 1.3E-33 2.8E-38 231.5 17.5 222 9-240 112-339 (339)
10 PLN03154 putative allyl alcoho 100.0 1.5E-33 3.2E-38 231.5 16.9 222 14-240 106-345 (348)
11 PLN02586 probable cinnamyl alc 100.0 5.1E-33 1.1E-37 229.3 18.0 218 11-240 133-353 (360)
12 cd08281 liver_ADH_like1 Zinc-d 100.0 4.1E-33 8.9E-38 231.0 16.7 219 13-238 143-371 (371)
13 PLN02178 cinnamyl-alcohol dehy 100.0 7.7E-33 1.7E-37 229.0 17.9 218 12-240 128-348 (375)
14 PRK10309 galactitol-1-phosphat 100.0 2.3E-32 5.1E-37 224.7 18.1 231 2-240 103-346 (347)
15 COG1062 AdhC Zn-dependent alco 100.0 3.2E-33 7E-38 217.6 11.7 223 9-239 133-365 (366)
16 cd08295 double_bond_reductase_ 100.0 7.9E-32 1.7E-36 220.8 18.4 222 14-240 101-338 (338)
17 TIGR03201 dearomat_had 6-hydro 100.0 9.9E-32 2.2E-36 221.0 18.1 229 2-240 102-349 (349)
18 TIGR03451 mycoS_dep_FDH mycoth 100.0 7.2E-32 1.6E-36 222.6 17.2 220 13-239 128-357 (358)
19 TIGR02825 B4_12hDH leukotriene 100.0 1.6E-31 3.5E-36 217.8 17.5 221 14-239 86-325 (325)
20 PLN02827 Alcohol dehydrogenase 100.0 2E-31 4.3E-36 221.1 16.9 219 13-240 145-376 (378)
21 KOG0022 Alcohol dehydrogenase, 100.0 6.2E-32 1.3E-36 207.5 12.1 231 2-239 133-374 (375)
22 cd08291 ETR_like_1 2-enoyl thi 100.0 6.2E-31 1.3E-35 214.3 18.4 218 13-238 96-323 (324)
23 PLN02514 cinnamyl-alcohol dehy 100.0 8.8E-31 1.9E-35 215.9 18.9 217 12-240 131-350 (357)
24 PLN02740 Alcohol dehydrogenase 100.0 6.6E-31 1.4E-35 218.4 17.6 219 13-240 150-381 (381)
25 TIGR02818 adh_III_F_hyde S-(hy 100.0 9.3E-31 2E-35 216.6 17.4 219 13-240 137-368 (368)
26 cd08294 leukotriene_B4_DH_like 100.0 1.3E-30 2.8E-35 212.8 18.1 222 14-240 88-329 (329)
27 cd08277 liver_alcohol_DH_like 100.0 1.4E-30 2.9E-35 215.5 17.9 218 13-239 136-365 (365)
28 cd08300 alcohol_DH_class_III c 100.0 2.6E-30 5.7E-35 214.0 17.6 218 13-239 138-368 (368)
29 cd08233 butanediol_DH_like (2R 100.0 2.7E-30 5.9E-35 212.8 17.4 217 13-239 126-351 (351)
30 cd08237 ribitol-5-phosphate_DH 100.0 2.5E-30 5.4E-35 212.0 16.8 220 2-240 103-339 (341)
31 TIGR03366 HpnZ_proposed putati 100.0 9.4E-31 2E-35 209.0 13.0 201 12-220 71-280 (280)
32 cd08246 crotonyl_coA_red croto 100.0 5.4E-30 1.2E-34 214.0 18.0 222 12-239 142-392 (393)
33 COG1063 Tdh Threonine dehydrog 100.0 2.7E-30 5.7E-35 211.5 15.7 222 12-240 119-350 (350)
34 cd08274 MDR9 Medium chain dehy 100.0 8.4E-30 1.8E-34 209.7 18.4 222 12-240 129-350 (350)
35 COG2130 Putative NADP-dependen 100.0 5.8E-30 1.3E-34 196.0 15.7 222 13-240 100-338 (340)
36 cd08231 MDR_TM0436_like Hypoth 100.0 1.3E-29 2.8E-34 209.5 18.2 221 12-240 127-361 (361)
37 cd08301 alcohol_DH_plants Plan 100.0 1E-29 2.2E-34 210.7 17.0 218 13-238 139-368 (369)
38 cd08296 CAD_like Cinnamyl alco 100.0 3.6E-29 7.8E-34 204.7 18.1 219 9-239 112-333 (333)
39 cd08293 PTGR2 Prostaglandin re 100.0 5.7E-29 1.2E-33 204.5 19.4 222 14-240 101-345 (345)
40 cd08230 glucose_DH Glucose deh 100.0 2.2E-29 4.8E-34 207.6 16.6 215 12-240 119-355 (355)
41 cd08292 ETR_like_2 2-enoyl thi 100.0 5.2E-29 1.1E-33 202.9 18.1 228 6-239 85-324 (324)
42 TIGR01751 crot-CoA-red crotony 100.0 5.7E-29 1.2E-33 208.0 17.7 222 12-239 138-386 (398)
43 cd05284 arabinose_DH_like D-ar 100.0 6.9E-29 1.5E-33 203.6 17.5 229 2-240 107-340 (340)
44 cd08238 sorbose_phosphate_red 100.0 6.1E-29 1.3E-33 208.4 16.9 223 11-240 111-368 (410)
45 cd08297 CAD3 Cinnamyl alcohol 100.0 1.8E-28 3.8E-33 201.2 19.0 225 8-240 113-341 (341)
46 TIGR01202 bchC 2-desacetyl-2-h 100.0 6.9E-29 1.5E-33 200.7 15.2 204 13-239 100-308 (308)
47 TIGR02819 fdhA_non_GSH formald 100.0 4.6E-28 1E-32 201.5 17.3 219 12-240 131-390 (393)
48 cd08244 MDR_enoyl_red Possible 100.0 1.3E-27 2.8E-32 194.6 18.9 222 13-240 95-324 (324)
49 cd08285 NADP_ADH NADP(H)-depen 100.0 7.2E-28 1.6E-32 198.4 17.4 222 12-240 116-351 (351)
50 cd08270 MDR4 Medium chain dehy 100.0 3E-27 6.6E-32 190.9 20.2 222 6-240 78-305 (305)
51 KOG0025 Zn2+-binding dehydroge 100.0 5.9E-28 1.3E-32 183.5 14.8 230 5-239 104-351 (354)
52 cd08289 MDR_yhfp_like Yhfp put 100.0 7.1E-28 1.5E-32 196.4 16.3 227 12-240 94-326 (326)
53 cd05282 ETR_like 2-enoyl thioe 100.0 1.7E-27 3.7E-32 193.8 17.8 222 13-239 90-323 (323)
54 PRK13771 putative alcohol dehy 100.0 6.9E-28 1.5E-32 197.2 15.1 228 2-240 104-333 (334)
55 cd05283 CAD1 Cinnamyl alcohol 100.0 3.4E-27 7.4E-32 193.3 19.2 216 11-239 120-337 (337)
56 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.4E-27 3E-32 196.6 16.7 220 12-240 126-350 (350)
57 cd08290 ETR 2-enoyl thioester 100.0 1.8E-27 4E-32 195.2 16.8 222 13-240 98-341 (341)
58 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.6E-27 3.6E-32 197.3 16.5 222 12-239 138-367 (367)
59 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.9E-27 4.2E-32 195.4 16.5 222 10-239 112-344 (345)
60 PRK09422 ethanol-active dehydr 100.0 2.3E-27 5E-32 194.4 16.9 220 9-239 111-335 (338)
61 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 4.3E-27 9.3E-32 191.7 18.3 225 12-240 94-325 (325)
62 cd08243 quinone_oxidoreductase 100.0 4.2E-27 9.2E-32 191.1 18.1 221 12-238 93-319 (320)
63 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 5.5E-27 1.2E-31 192.0 18.0 222 10-240 114-338 (338)
64 PTZ00354 alcohol dehydrogenase 100.0 7.1E-27 1.5E-31 191.0 18.6 229 6-239 85-327 (334)
65 cd08276 MDR7 Medium chain dehy 100.0 9.4E-27 2E-31 190.4 19.3 225 9-240 108-336 (336)
66 TIGR02817 adh_fam_1 zinc-bindi 100.0 9.2E-27 2E-31 190.7 19.2 223 12-239 94-334 (336)
67 PRK10083 putative oxidoreducta 100.0 6.3E-27 1.4E-31 191.9 18.0 220 9-240 110-337 (339)
68 cd08259 Zn_ADH5 Alcohol dehydr 100.0 7.1E-27 1.5E-31 190.8 17.1 228 2-239 104-332 (332)
69 TIGR02823 oxido_YhdH putative 99.9 1.1E-26 2.3E-31 189.2 17.6 222 12-240 93-323 (323)
70 cd05279 Zn_ADH1 Liver alcohol 99.9 1.1E-26 2.4E-31 192.2 17.2 217 13-238 135-364 (365)
71 KOG1202 Animal-type fatty acid 99.9 2.4E-28 5.1E-33 213.1 7.2 230 5-240 1496-1741(2376)
72 cd08266 Zn_ADH_like1 Alcohol d 99.9 2.5E-26 5.4E-31 188.1 18.5 233 2-240 107-342 (342)
73 cd08235 iditol_2_DH_like L-idi 99.9 1.9E-26 4E-31 189.4 17.7 220 10-239 111-343 (343)
74 cd05285 sorbitol_DH Sorbitol d 99.9 1.5E-26 3.3E-31 189.9 16.9 217 12-239 115-342 (343)
75 cd08265 Zn_ADH3 Alcohol dehydr 99.9 1.7E-26 3.7E-31 192.3 16.8 228 2-238 137-383 (384)
76 PRK10754 quinone oxidoreductas 99.9 1.9E-26 4.1E-31 188.2 16.7 222 12-240 91-327 (327)
77 cd08242 MDR_like Medium chain 99.9 3.9E-26 8.5E-31 185.7 18.1 208 12-240 108-319 (319)
78 cd08298 CAD2 Cinnamyl alcohol 99.9 4.8E-26 1E-30 185.9 18.5 219 2-238 109-329 (329)
79 cd08278 benzyl_alcohol_DH Benz 99.9 4E-26 8.7E-31 188.8 18.0 218 13-238 138-364 (365)
80 cd08256 Zn_ADH2 Alcohol dehydr 99.9 4.8E-26 1E-30 187.5 18.0 216 12-238 126-350 (350)
81 cd08283 FDH_like_1 Glutathione 99.9 3.4E-26 7.4E-31 190.5 17.1 220 13-240 135-386 (386)
82 cd08261 Zn_ADH7 Alcohol dehydr 99.9 6.4E-26 1.4E-30 185.8 18.2 218 12-240 113-337 (337)
83 cd08284 FDH_like_2 Glutathione 99.9 5.5E-26 1.2E-30 186.7 17.8 218 13-240 118-344 (344)
84 cd08264 Zn_ADH_like2 Alcohol d 99.9 2E-26 4.4E-31 187.8 14.9 221 2-236 104-324 (325)
85 cd08249 enoyl_reductase_like e 99.9 4.1E-26 9E-31 187.1 15.9 227 12-240 95-339 (339)
86 cd08247 AST1_like AST1 is a cy 99.9 4E-25 8.6E-30 182.2 21.8 223 13-240 98-352 (352)
87 cd05278 FDH_like Formaldehyde 99.9 3.9E-26 8.5E-31 187.7 15.6 221 12-240 117-347 (347)
88 PRK05396 tdh L-threonine 3-deh 99.9 7.2E-26 1.6E-30 185.8 16.9 228 2-240 107-340 (341)
89 cd05286 QOR2 Quinone oxidoredu 99.9 1.7E-25 3.8E-30 181.2 18.6 223 13-240 88-320 (320)
90 cd05288 PGDH Prostaglandin deh 99.9 8.2E-26 1.8E-30 184.5 16.3 219 14-238 94-329 (329)
91 cd08279 Zn_ADH_class_III Class 99.9 1.1E-25 2.4E-30 186.1 17.2 220 12-237 133-362 (363)
92 cd08299 alcohol_DH_class_I_II_ 99.9 1.5E-25 3.2E-30 185.9 17.7 220 12-240 141-373 (373)
93 cd08286 FDH_like_ADH2 formalde 99.9 1.8E-25 3.8E-30 183.8 18.0 220 12-240 115-345 (345)
94 cd08262 Zn_ADH8 Alcohol dehydr 99.9 1.8E-25 3.8E-30 183.5 17.3 218 12-239 114-341 (341)
95 cd08245 CAD Cinnamyl alcohol d 99.9 3.3E-25 7.1E-30 181.1 18.8 218 9-238 111-330 (330)
96 KOG1196 Predicted NAD-dependen 99.9 9.3E-26 2E-30 172.5 14.4 221 15-240 102-340 (343)
97 cd05281 TDH Threonine dehydrog 99.9 1.9E-25 4E-30 183.4 17.4 218 12-240 117-341 (341)
98 TIGR00692 tdh L-threonine 3-de 99.9 2E-25 4.2E-30 183.2 17.4 218 12-240 115-340 (340)
99 cd08267 MDR1 Medium chain dehy 99.9 1.5E-24 3.3E-29 176.1 22.3 220 13-238 95-319 (319)
100 cd08252 AL_MDR Arginate lyase 99.9 6.5E-25 1.4E-29 179.7 19.8 220 12-239 95-336 (336)
101 cd08287 FDH_like_ADH3 formalde 99.9 5E-25 1.1E-29 181.1 17.8 222 9-240 110-345 (345)
102 cd08282 PFDH_like Pseudomonas 99.9 5E-25 1.1E-29 183.0 17.5 217 13-240 124-375 (375)
103 cd08236 sugar_DH NAD(P)-depend 99.9 4.1E-25 8.9E-30 181.4 16.8 219 12-238 112-343 (343)
104 cd08232 idonate-5-DH L-idonate 99.9 7.5E-25 1.6E-29 179.6 18.2 217 12-240 118-339 (339)
105 cd05276 p53_inducible_oxidored 99.9 4.7E-25 1E-29 178.9 16.8 228 6-238 84-323 (323)
106 PLN02702 L-idonate 5-dehydroge 99.9 4.8E-25 1E-29 182.5 16.9 217 13-240 135-364 (364)
107 cd08251 polyketide_synthase po 99.9 2.9E-25 6.3E-30 178.9 14.9 221 12-238 72-303 (303)
108 cd08248 RTN4I1 Human Reticulon 99.9 3.4E-24 7.3E-29 176.5 21.5 224 13-239 110-350 (350)
109 cd08250 Mgc45594_like Mgc45594 99.9 8.1E-25 1.8E-29 178.7 16.7 220 13-239 93-329 (329)
110 cd08288 MDR_yhdh Yhdh putative 99.9 1.5E-24 3.2E-29 176.7 18.1 223 12-240 94-324 (324)
111 cd08234 threonine_DH_like L-th 99.9 9.7E-25 2.1E-29 178.6 16.6 216 12-238 112-333 (334)
112 cd08269 Zn_ADH9 Alcohol dehydr 99.9 1.7E-24 3.7E-29 175.4 17.8 217 13-238 84-311 (312)
113 TIGR02824 quinone_pig3 putativ 99.9 1.9E-24 4.2E-29 175.6 18.0 227 9-240 87-325 (325)
114 cd08253 zeta_crystallin Zeta-c 99.9 2.2E-24 4.9E-29 175.2 18.4 223 12-240 95-325 (325)
115 cd08271 MDR5 Medium chain dehy 99.9 8E-24 1.7E-28 172.3 21.6 224 12-240 92-325 (325)
116 cd05289 MDR_like_2 alcohol deh 99.9 1E-23 2.2E-28 170.3 21.3 214 13-238 96-309 (309)
117 cd08272 MDR6 Medium chain dehy 99.9 4.8E-24 1E-28 173.5 19.2 219 13-240 96-326 (326)
118 cd08273 MDR8 Medium chain dehy 99.9 5E-24 1.1E-28 174.1 19.1 220 12-238 90-330 (331)
119 cd05195 enoyl_red enoyl reduct 99.9 2.9E-24 6.2E-29 171.8 16.1 221 13-238 60-293 (293)
120 smart00829 PKS_ER Enoylreducta 99.9 2.9E-24 6.4E-29 171.5 16.1 220 13-238 56-288 (288)
121 cd08241 QOR1 Quinone oxidoredu 99.9 1.3E-23 2.9E-28 170.5 18.2 222 13-239 91-323 (323)
122 cd08268 MDR2 Medium chain dehy 99.9 2.1E-23 4.6E-28 169.8 18.0 224 12-240 95-328 (328)
123 cd08255 2-desacetyl-2-hydroxye 99.9 1.7E-23 3.6E-28 167.0 15.5 210 14-238 52-277 (277)
124 cd08275 MDR3 Medium chain dehy 99.9 4.9E-23 1.1E-27 168.4 17.2 229 7-240 84-337 (337)
125 cd08258 Zn_ADH4 Alcohol dehydr 99.9 3.7E-23 8.1E-28 167.2 15.1 185 12-205 116-306 (306)
126 cd05188 MDR Medium chain reduc 99.9 9.1E-23 2E-27 161.8 14.6 193 2-201 75-270 (271)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 7.1E-20 1.5E-24 129.7 2.9 126 78-204 1-130 (130)
128 PF13602 ADH_zinc_N_2: Zinc-bi 99.7 1.3E-17 2.9E-22 117.5 6.4 120 109-238 1-127 (127)
129 cd00401 AdoHcyase S-adenosyl-L 99.6 2.9E-14 6.4E-19 117.8 11.2 161 65-239 200-375 (413)
130 PRK09424 pntA NAD(P) transhydr 99.5 9.6E-13 2.1E-17 111.5 12.0 142 65-208 163-333 (509)
131 PRK11873 arsM arsenite S-adeno 98.7 5.2E-08 1.1E-12 77.6 6.3 164 65-237 76-258 (272)
132 TIGR00561 pntA NAD(P) transhyd 98.4 5.7E-07 1.2E-11 76.6 7.1 99 65-164 162-286 (511)
133 PRK05476 S-adenosyl-L-homocyst 98.4 1.9E-06 4E-11 72.1 10.0 103 48-165 197-302 (425)
134 TIGR00936 ahcY adenosylhomocys 98.3 6.1E-06 1.3E-10 68.7 9.0 90 65-165 193-285 (406)
135 PRK12771 putative glutamate sy 98.2 5.1E-06 1.1E-10 73.0 8.0 95 65-162 135-253 (564)
136 PRK08306 dipicolinate synthase 98.2 1.9E-05 4.2E-10 63.5 10.2 93 66-166 151-245 (296)
137 PLN02494 adenosylhomocysteinas 98.1 2.2E-05 4.8E-10 66.1 9.9 89 65-164 252-343 (477)
138 PTZ00075 Adenosylhomocysteinas 98.0 7.8E-05 1.7E-09 63.0 10.9 90 65-165 252-344 (476)
139 cd05213 NAD_bind_Glutamyl_tRNA 97.8 3E-05 6.4E-10 63.0 5.3 109 25-145 139-251 (311)
140 TIGR00518 alaDH alanine dehydr 97.8 0.00018 3.9E-09 59.8 8.8 95 66-164 166-269 (370)
141 PRK00517 prmA ribosomal protei 97.8 0.00042 9E-09 54.5 10.5 129 15-165 78-216 (250)
142 PRK08324 short chain dehydroge 97.8 3E-05 6.4E-10 69.7 4.4 112 14-141 385-507 (681)
143 KOG1209 1-Acyl dihydroxyaceton 97.7 0.00037 8E-09 52.3 8.6 78 65-142 5-91 (289)
144 COG0300 DltE Short-chain dehyd 97.6 0.00018 3.9E-09 56.4 6.6 77 65-141 4-93 (265)
145 PRK05786 fabG 3-ketoacyl-(acyl 97.6 0.00033 7.1E-09 54.4 8.1 77 66-142 4-91 (238)
146 PRK11705 cyclopropane fatty ac 97.6 0.0003 6.5E-09 58.7 8.2 112 40-162 146-267 (383)
147 TIGR01035 hemA glutamyl-tRNA r 97.6 5.8E-05 1.3E-09 63.7 4.0 119 3-144 127-252 (417)
148 PF01488 Shikimate_DH: Shikima 97.6 0.00038 8.2E-09 49.3 6.8 91 66-163 11-110 (135)
149 PF02353 CMAS: Mycolic acid cy 97.5 9.4E-05 2E-09 58.7 3.9 99 52-161 53-165 (273)
150 COG4221 Short-chain alcohol de 97.5 0.00035 7.6E-09 53.6 6.6 77 66-142 5-91 (246)
151 PF02826 2-Hacid_dh_C: D-isome 97.5 0.00059 1.3E-08 50.8 7.8 116 65-217 34-156 (178)
152 PRK12742 oxidoreductase; Provi 97.5 0.00057 1.2E-08 53.0 8.1 75 66-142 5-85 (237)
153 PRK05993 short chain dehydroge 97.5 0.00037 8E-09 55.6 7.1 76 66-141 3-85 (277)
154 TIGR02853 spore_dpaA dipicolin 97.4 0.0005 1.1E-08 55.1 7.1 93 66-166 150-244 (287)
155 COG2230 Cfa Cyclopropane fatty 97.4 0.00088 1.9E-08 52.9 8.2 104 48-162 59-176 (283)
156 PRK05693 short chain dehydroge 97.4 0.00048 1E-08 54.8 6.8 75 68-142 2-82 (274)
157 COG2518 Pcm Protein-L-isoaspar 97.4 0.0021 4.6E-08 48.4 9.3 99 54-162 65-169 (209)
158 COG3967 DltE Short-chain dehyd 97.4 0.00054 1.2E-08 51.1 5.9 76 66-141 4-87 (245)
159 PRK08177 short chain dehydroge 97.3 0.0012 2.6E-08 50.9 8.0 75 68-142 2-81 (225)
160 PRK00045 hemA glutamyl-tRNA re 97.3 0.00053 1.2E-08 58.1 5.9 72 65-144 180-254 (423)
161 PRK06182 short chain dehydroge 97.3 0.001 2.2E-08 52.9 6.9 77 66-142 2-84 (273)
162 PRK12367 short chain dehydroge 97.3 0.0017 3.7E-08 50.9 7.9 75 66-142 13-89 (245)
163 PRK06139 short chain dehydroge 97.3 0.00088 1.9E-08 54.9 6.6 77 66-142 6-94 (330)
164 PF00670 AdoHcyase_NAD: S-aden 97.2 0.0028 6.1E-08 45.8 8.0 102 50-166 10-114 (162)
165 PRK07060 short chain dehydroge 97.2 0.0012 2.6E-08 51.4 6.8 75 66-142 8-87 (245)
166 PRK06057 short chain dehydroge 97.2 0.0013 2.9E-08 51.7 6.8 77 66-142 6-89 (255)
167 PRK09291 short chain dehydroge 97.2 0.0017 3.7E-08 51.0 7.3 74 67-142 2-83 (257)
168 PRK06949 short chain dehydroge 97.2 0.0011 2.5E-08 52.0 6.1 77 66-142 8-96 (258)
169 PRK05866 short chain dehydroge 97.1 0.0019 4.1E-08 52.1 7.1 77 66-142 39-127 (293)
170 PF13460 NAD_binding_10: NADH( 97.1 0.002 4.4E-08 47.9 6.8 88 70-162 1-97 (183)
171 TIGR00406 prmA ribosomal prote 97.1 0.0026 5.5E-08 51.2 7.7 95 65-165 158-262 (288)
172 PRK00377 cbiT cobalt-precorrin 97.1 0.0032 6.9E-08 47.7 7.8 93 65-160 39-143 (198)
173 PRK08261 fabG 3-ketoacyl-(acyl 97.1 0.0015 3.3E-08 55.9 6.7 77 66-142 209-294 (450)
174 PRK08017 oxidoreductase; Provi 97.1 0.0027 5.8E-08 49.8 7.6 75 68-142 3-84 (256)
175 PRK04148 hypothetical protein; 97.1 0.004 8.8E-08 43.6 7.5 93 65-159 15-129 (134)
176 PF12847 Methyltransf_18: Meth 97.1 0.00065 1.4E-08 46.1 3.4 92 66-160 1-109 (112)
177 cd01078 NAD_bind_H4MPT_DH NADP 97.1 0.017 3.7E-07 43.5 11.5 76 66-144 27-109 (194)
178 PRK07806 short chain dehydroge 97.0 0.0045 9.7E-08 48.4 8.3 35 66-100 5-39 (248)
179 PLN03209 translocon at the inn 97.0 0.003 6.4E-08 55.0 7.6 40 65-104 78-118 (576)
180 PRK06719 precorrin-2 dehydroge 97.0 0.0041 8.9E-08 45.2 7.2 88 66-161 12-99 (157)
181 PRK13943 protein-L-isoaspartat 97.0 0.0069 1.5E-07 49.3 9.2 98 55-161 74-179 (322)
182 PRK06953 short chain dehydroge 97.0 0.0034 7.4E-08 48.2 7.1 75 68-142 2-80 (222)
183 PRK06196 oxidoreductase; Provi 96.9 0.0029 6.3E-08 51.5 6.8 77 66-142 25-109 (315)
184 PRK07831 short chain dehydroge 96.9 0.0024 5.2E-08 50.4 6.1 78 65-142 15-107 (262)
185 PRK05872 short chain dehydroge 96.9 0.0023 5.1E-08 51.6 6.0 77 66-142 8-95 (296)
186 COG2226 UbiE Methylase involve 96.9 0.011 2.3E-07 45.9 9.3 96 65-164 50-158 (238)
187 PRK07814 short chain dehydroge 96.9 0.0035 7.5E-08 49.6 6.8 77 66-142 9-97 (263)
188 PRK08339 short chain dehydroge 96.9 0.0035 7.6E-08 49.6 6.8 77 66-142 7-95 (263)
189 TIGR01470 cysG_Nterm siroheme 96.9 0.0063 1.4E-07 46.3 7.7 90 66-162 8-100 (205)
190 PRK14175 bifunctional 5,10-met 96.9 0.025 5.4E-07 45.1 11.1 96 40-165 136-233 (286)
191 PRK09072 short chain dehydroge 96.8 0.0043 9.3E-08 49.0 6.9 77 66-142 4-90 (263)
192 TIGR03325 BphB_TodD cis-2,3-di 96.8 0.0043 9.3E-08 49.0 6.8 76 66-141 4-88 (262)
193 PRK06180 short chain dehydroge 96.8 0.004 8.7E-08 49.6 6.6 77 66-142 3-88 (277)
194 PRK05867 short chain dehydroge 96.8 0.0041 9E-08 48.8 6.6 77 66-142 8-96 (253)
195 PRK06841 short chain dehydroge 96.8 0.0028 6.1E-08 49.7 5.6 77 66-142 14-99 (255)
196 PRK06194 hypothetical protein; 96.8 0.0044 9.6E-08 49.6 6.7 77 66-142 5-93 (287)
197 PRK12829 short chain dehydroge 96.8 0.0052 1.1E-07 48.4 7.0 78 65-142 9-96 (264)
198 PRK06181 short chain dehydroge 96.8 0.0096 2.1E-07 46.9 8.4 33 68-100 2-34 (263)
199 PRK08217 fabG 3-ketoacyl-(acyl 96.8 0.0041 8.8E-08 48.6 6.2 77 66-142 4-92 (253)
200 PRK07904 short chain dehydroge 96.8 0.0065 1.4E-07 47.8 7.2 78 65-142 6-97 (253)
201 PRK06200 2,3-dihydroxy-2,3-dih 96.7 0.0047 1E-07 48.7 6.4 77 66-142 5-90 (263)
202 PRK03369 murD UDP-N-acetylmura 96.7 0.0053 1.1E-07 53.2 7.2 71 65-143 10-81 (488)
203 PRK07326 short chain dehydroge 96.7 0.0059 1.3E-07 47.3 6.7 77 66-142 5-92 (237)
204 PRK07453 protochlorophyllide o 96.7 0.0046 1E-07 50.5 6.3 76 66-141 5-92 (322)
205 PRK14192 bifunctional 5,10-met 96.7 0.03 6.6E-07 44.8 10.6 76 65-164 157-233 (283)
206 PRK06500 short chain dehydroge 96.7 0.0064 1.4E-07 47.4 6.8 77 66-142 5-90 (249)
207 PRK06718 precorrin-2 dehydroge 96.7 0.008 1.7E-07 45.6 7.0 91 66-163 9-101 (202)
208 TIGR02469 CbiT precorrin-6Y C5 96.7 0.022 4.8E-07 39.1 8.8 92 65-161 18-121 (124)
209 PLN02657 3,8-divinyl protochlo 96.7 0.006 1.3E-07 51.3 6.9 36 65-100 58-93 (390)
210 PRK12809 putative oxidoreducta 96.7 0.01 2.2E-07 53.2 8.7 76 66-143 309-406 (639)
211 PRK07109 short chain dehydroge 96.7 0.007 1.5E-07 49.8 7.1 77 66-142 7-95 (334)
212 PRK07677 short chain dehydroge 96.7 0.0051 1.1E-07 48.2 6.0 76 67-142 1-88 (252)
213 PRK07478 short chain dehydroge 96.7 0.0073 1.6E-07 47.4 6.9 77 66-142 5-93 (254)
214 PF11017 DUF2855: Protein of u 96.6 0.02 4.3E-07 46.2 9.1 92 66-162 135-231 (314)
215 PRK08267 short chain dehydroge 96.6 0.0084 1.8E-07 47.2 7.0 75 68-142 2-87 (260)
216 PRK12939 short chain dehydroge 96.6 0.0085 1.8E-07 46.7 6.8 77 66-142 6-94 (250)
217 PRK07063 short chain dehydroge 96.6 0.0081 1.8E-07 47.3 6.6 35 66-100 6-40 (260)
218 TIGR01832 kduD 2-deoxy-D-gluco 96.6 0.0096 2.1E-07 46.5 7.0 77 66-142 4-90 (248)
219 PRK07825 short chain dehydroge 96.6 0.012 2.6E-07 46.7 7.6 77 66-142 4-88 (273)
220 TIGR00507 aroE shikimate 5-deh 96.6 0.053 1.2E-06 43.2 11.2 91 65-164 115-216 (270)
221 PRK13940 glutamyl-tRNA reducta 96.5 0.024 5.3E-07 47.9 9.6 72 66-144 180-254 (414)
222 TIGR01318 gltD_gamma_fam gluta 96.5 0.0092 2E-07 51.4 7.1 77 65-143 139-237 (467)
223 CHL00194 ycf39 Ycf39; Provisio 96.5 0.0099 2.2E-07 48.4 7.1 71 69-142 2-74 (317)
224 PRK08265 short chain dehydroge 96.5 0.0086 1.9E-07 47.3 6.4 77 66-142 5-90 (261)
225 PRK12828 short chain dehydroge 96.5 0.0076 1.7E-07 46.6 6.1 35 66-100 6-40 (239)
226 PRK12481 2-deoxy-D-gluconate 3 96.5 0.0095 2.1E-07 46.8 6.6 77 66-142 7-93 (251)
227 KOG1205 Predicted dehydrogenas 96.5 0.015 3.2E-07 46.2 7.5 76 66-141 11-100 (282)
228 PLN02253 xanthoxin dehydrogena 96.5 0.0097 2.1E-07 47.4 6.7 35 66-100 17-51 (280)
229 PRK06197 short chain dehydroge 96.5 0.0092 2E-07 48.3 6.6 35 66-100 15-49 (306)
230 PRK07774 short chain dehydroge 96.5 0.012 2.5E-07 46.0 6.9 35 66-100 5-39 (250)
231 PRK07424 bifunctional sterol d 96.5 0.014 3.1E-07 49.1 7.8 76 66-142 177-255 (406)
232 PRK12384 sorbitol-6-phosphate 96.5 0.011 2.3E-07 46.5 6.8 34 67-100 2-35 (259)
233 PRK05875 short chain dehydroge 96.5 0.0088 1.9E-07 47.5 6.3 35 66-100 6-40 (276)
234 PRK08628 short chain dehydroge 96.5 0.0087 1.9E-07 47.0 6.2 77 66-142 6-93 (258)
235 PRK08340 glucose-1-dehydrogena 96.5 0.011 2.4E-07 46.6 6.8 74 69-142 2-86 (259)
236 PRK06505 enoyl-(acyl carrier p 96.5 0.016 3.4E-07 46.2 7.7 77 66-142 6-95 (271)
237 PRK07454 short chain dehydroge 96.5 0.012 2.6E-07 45.7 6.9 78 65-142 4-93 (241)
238 PRK08264 short chain dehydroge 96.4 0.0097 2.1E-07 46.1 6.3 72 66-142 5-83 (238)
239 PRK06483 dihydromonapterin red 96.4 0.012 2.6E-07 45.6 6.8 75 67-142 2-84 (236)
240 PRK06138 short chain dehydroge 96.4 0.011 2.4E-07 46.2 6.5 35 66-100 4-38 (252)
241 COG0169 AroE Shikimate 5-dehyd 96.4 0.018 3.8E-07 46.0 7.5 91 65-162 124-226 (283)
242 KOG1201 Hydroxysteroid 17-beta 96.4 0.014 3.1E-07 46.3 6.9 76 65-141 36-123 (300)
243 TIGR03206 benzo_BadH 2-hydroxy 96.4 0.012 2.6E-07 45.9 6.7 35 66-100 2-36 (250)
244 COG2242 CobL Precorrin-6B meth 96.4 0.04 8.7E-07 40.8 8.8 92 65-162 33-135 (187)
245 PRK13394 3-hydroxybutyrate deh 96.4 0.014 3E-07 45.9 7.1 77 66-142 6-94 (262)
246 PF02882 THF_DHG_CYH_C: Tetrah 96.4 0.12 2.6E-06 37.6 11.2 98 38-164 12-110 (160)
247 PRK08643 acetoin reductase; Va 96.4 0.013 2.7E-07 46.1 6.8 76 67-142 2-89 (256)
248 PRK00107 gidB 16S rRNA methylt 96.4 0.027 5.9E-07 42.2 8.2 94 65-163 44-146 (187)
249 PRK08277 D-mannonate oxidoredu 96.4 0.012 2.6E-07 46.8 6.8 35 66-100 9-43 (278)
250 PRK08993 2-deoxy-D-gluconate 3 96.4 0.011 2.4E-07 46.4 6.5 77 66-142 9-95 (253)
251 PRK06463 fabG 3-ketoacyl-(acyl 96.4 0.012 2.6E-07 46.2 6.7 77 66-142 6-89 (255)
252 PF02558 ApbA: Ketopantoate re 96.4 0.0065 1.4E-07 43.7 4.7 91 70-163 1-102 (151)
253 PRK05876 short chain dehydroge 96.4 0.011 2.4E-07 47.1 6.4 76 66-141 5-92 (275)
254 PRK06914 short chain dehydroge 96.4 0.014 2.9E-07 46.6 7.0 35 66-100 2-36 (280)
255 PRK08862 short chain dehydroge 96.4 0.022 4.7E-07 44.1 7.8 76 66-141 4-92 (227)
256 PRK06125 short chain dehydroge 96.4 0.015 3.3E-07 45.7 7.1 75 66-142 6-91 (259)
257 cd01080 NAD_bind_m-THF_DH_Cycl 96.4 0.097 2.1E-06 38.5 10.7 56 39-100 21-77 (168)
258 COG2227 UbiG 2-polyprenyl-3-me 96.4 0.0065 1.4E-07 46.6 4.7 94 66-163 59-162 (243)
259 PRK06482 short chain dehydroge 96.4 0.014 3E-07 46.5 6.8 75 68-142 3-86 (276)
260 PRK07533 enoyl-(acyl carrier p 96.3 0.022 4.8E-07 44.9 7.8 77 66-142 9-98 (258)
261 PLN02653 GDP-mannose 4,6-dehyd 96.3 0.013 2.8E-07 48.2 6.6 37 64-100 3-39 (340)
262 PRK06179 short chain dehydroge 96.3 0.0064 1.4E-07 48.2 4.6 75 66-142 3-83 (270)
263 PRK00258 aroE shikimate 5-dehy 96.3 0.082 1.8E-06 42.3 10.9 92 66-163 122-222 (278)
264 KOG1014 17 beta-hydroxysteroid 96.3 0.019 4.2E-07 45.7 7.0 77 65-141 47-135 (312)
265 TIGR02622 CDP_4_6_dhtase CDP-g 96.3 0.021 4.6E-07 47.2 7.7 35 66-100 3-37 (349)
266 PRK08278 short chain dehydroge 96.3 0.016 3.6E-07 46.0 6.9 35 66-100 5-39 (273)
267 PRK05884 short chain dehydroge 96.3 0.012 2.5E-07 45.4 5.8 72 69-141 2-78 (223)
268 PLN00141 Tic62-NAD(P)-related 96.3 0.018 4E-07 45.1 7.0 76 66-142 16-95 (251)
269 PRK05447 1-deoxy-D-xylulose 5- 96.3 0.015 3.2E-07 48.2 6.5 94 68-161 2-121 (385)
270 PRK06484 short chain dehydroge 96.3 0.017 3.6E-07 50.5 7.3 78 65-142 267-353 (520)
271 PRK08263 short chain dehydroge 96.3 0.015 3.3E-07 46.2 6.5 76 67-142 3-87 (275)
272 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.0034 7.4E-08 53.8 2.9 87 65-164 32-125 (450)
273 PRK13942 protein-L-isoaspartat 96.2 0.077 1.7E-06 40.6 10.1 98 55-161 70-175 (212)
274 PRK06198 short chain dehydroge 96.2 0.012 2.5E-07 46.4 5.8 77 66-142 5-94 (260)
275 PRK05653 fabG 3-ketoacyl-(acyl 96.2 0.02 4.4E-07 44.4 7.1 77 66-142 4-92 (246)
276 PRK10258 biotin biosynthesis p 96.2 0.16 3.5E-06 39.9 12.1 92 65-163 41-141 (251)
277 PRK06079 enoyl-(acyl carrier p 96.2 0.01 2.2E-07 46.6 5.4 76 66-141 6-92 (252)
278 PRK07775 short chain dehydroge 96.2 0.022 4.8E-07 45.3 7.3 35 66-100 9-43 (274)
279 PLN02989 cinnamyl-alcohol dehy 96.2 0.022 4.9E-07 46.4 7.5 36 65-100 3-38 (325)
280 PRK08226 short chain dehydroge 96.2 0.016 3.4E-07 45.7 6.3 35 66-100 5-39 (263)
281 PRK14188 bifunctional 5,10-met 96.2 0.094 2E-06 42.2 10.6 94 41-164 137-232 (296)
282 PRK07074 short chain dehydroge 96.2 0.017 3.6E-07 45.4 6.4 76 67-142 2-87 (257)
283 TIGR02632 RhaD_aldol-ADH rhamn 96.2 0.015 3.3E-07 52.5 6.8 35 66-100 413-447 (676)
284 PRK08415 enoyl-(acyl carrier p 96.2 0.03 6.5E-07 44.6 7.9 77 66-142 4-93 (274)
285 PRK07023 short chain dehydroge 96.2 0.026 5.7E-07 43.9 7.4 32 69-100 3-34 (243)
286 PRK12429 3-hydroxybutyrate deh 96.2 0.021 4.5E-07 44.8 6.8 35 66-100 3-37 (258)
287 cd01075 NAD_bind_Leu_Phe_Val_D 96.2 0.021 4.6E-07 43.3 6.6 66 66-141 27-94 (200)
288 COG4122 Predicted O-methyltran 96.2 0.033 7.1E-07 42.6 7.5 95 65-161 58-165 (219)
289 PRK06935 2-deoxy-D-gluconate 3 96.2 0.016 3.6E-07 45.5 6.3 77 66-142 14-101 (258)
290 PLN02986 cinnamyl-alcohol dehy 96.2 0.028 6E-07 45.8 7.8 36 65-100 3-38 (322)
291 PRK06114 short chain dehydroge 96.2 0.028 6E-07 44.1 7.5 35 66-100 7-41 (254)
292 PRK12743 oxidoreductase; Provi 96.2 0.025 5.5E-07 44.4 7.3 76 67-142 2-90 (256)
293 PRK06720 hypothetical protein; 96.2 0.038 8.2E-07 40.7 7.7 77 66-142 15-103 (169)
294 PRK07666 fabG 3-ketoacyl-(acyl 96.1 0.023 5E-07 44.1 6.9 35 66-100 6-40 (239)
295 PRK05717 oxidoreductase; Valid 96.1 0.018 3.8E-07 45.2 6.3 77 66-142 9-94 (255)
296 PRK07502 cyclohexadienyl dehyd 96.1 0.037 8E-07 44.9 8.2 91 67-165 6-103 (307)
297 PRK12938 acetyacetyl-CoA reduc 96.1 0.029 6.3E-07 43.7 7.4 77 66-142 2-91 (246)
298 PRK08251 short chain dehydroge 96.1 0.024 5.2E-07 44.2 6.9 38 67-104 2-40 (248)
299 PF01135 PCMT: Protein-L-isoas 96.1 0.015 3.3E-07 44.3 5.5 97 55-161 66-171 (209)
300 PRK14189 bifunctional 5,10-met 96.1 0.097 2.1E-06 41.8 10.2 95 41-164 137-232 (285)
301 TIGR03840 TMPT_Se_Te thiopurin 96.1 0.016 3.5E-07 44.4 5.7 96 65-163 33-153 (213)
302 PRK12549 shikimate 5-dehydroge 96.1 0.16 3.5E-06 40.8 11.6 69 66-141 126-201 (284)
303 PRK10538 malonic semialdehyde 96.1 0.024 5.3E-07 44.3 6.8 74 69-142 2-84 (248)
304 PRK05650 short chain dehydroge 96.1 0.025 5.3E-07 44.9 6.9 74 69-142 2-87 (270)
305 PRK10792 bifunctional 5,10-met 96.1 0.11 2.4E-06 41.4 10.4 95 41-164 138-233 (285)
306 PLN02896 cinnamyl-alcohol dehy 96.1 0.029 6.3E-07 46.4 7.5 36 65-100 8-43 (353)
307 PRK05562 precorrin-2 dehydroge 96.1 0.025 5.4E-07 43.4 6.5 91 65-162 23-116 (223)
308 PRK07231 fabG 3-ketoacyl-(acyl 96.0 0.018 4E-07 44.9 6.0 77 66-142 4-91 (251)
309 COG0686 Ald Alanine dehydrogen 96.0 0.017 3.6E-07 46.2 5.5 93 66-162 167-268 (371)
310 PRK08219 short chain dehydroge 96.0 0.021 4.5E-07 43.8 6.1 75 67-142 3-81 (227)
311 PRK12769 putative oxidoreducta 96.0 0.035 7.5E-07 50.0 8.3 76 65-142 325-422 (654)
312 PRK13243 glyoxylate reductase; 96.0 0.063 1.4E-06 44.1 9.1 88 66-164 149-242 (333)
313 COG1748 LYS9 Saccharopine dehy 96.0 0.011 2.4E-07 49.1 4.6 73 68-144 2-80 (389)
314 cd05212 NAD_bind_m-THF_DH_Cycl 96.0 0.21 4.6E-06 35.5 10.6 96 41-165 7-103 (140)
315 PRK06484 short chain dehydroge 96.0 0.021 4.6E-07 49.8 6.7 78 65-142 3-89 (520)
316 PRK07097 gluconate 5-dehydroge 96.0 0.031 6.6E-07 44.2 7.1 77 66-142 9-97 (265)
317 PF02670 DXP_reductoisom: 1-de 96.0 0.0099 2.2E-07 41.4 3.7 90 70-159 1-118 (129)
318 PRK05854 short chain dehydroge 96.0 0.019 4.2E-07 46.7 6.0 35 66-100 13-47 (313)
319 PRK06603 enoyl-(acyl carrier p 96.0 0.027 5.9E-07 44.4 6.7 77 65-141 6-95 (260)
320 PRK12936 3-ketoacyl-(acyl-carr 96.0 0.031 6.7E-07 43.4 6.9 77 66-142 5-90 (245)
321 PRK07792 fabG 3-ketoacyl-(acyl 96.0 0.036 7.8E-07 45.0 7.4 77 66-142 11-99 (306)
322 TIGR01532 E4PD_g-proteo D-eryt 95.9 0.035 7.6E-07 45.3 7.2 95 69-164 1-122 (325)
323 TIGR00438 rrmJ cell division p 95.9 0.038 8.2E-07 41.4 7.0 94 65-163 31-147 (188)
324 PRK08690 enoyl-(acyl carrier p 95.9 0.038 8.1E-07 43.7 7.3 77 66-142 5-94 (261)
325 PRK14194 bifunctional 5,10-met 95.9 0.16 3.4E-06 40.9 10.7 94 41-164 138-233 (301)
326 PLN02780 ketoreductase/ oxidor 95.9 0.017 3.8E-07 47.1 5.4 40 66-105 52-92 (320)
327 PRK08317 hypothetical protein; 95.9 0.027 5.9E-07 43.5 6.4 100 55-162 13-124 (241)
328 PRK07062 short chain dehydroge 95.9 0.023 5.1E-07 44.8 6.0 39 66-104 7-46 (265)
329 PRK05557 fabG 3-ketoacyl-(acyl 95.9 0.041 8.8E-07 42.7 7.3 34 66-99 4-37 (248)
330 PRK07576 short chain dehydroge 95.9 0.023 5E-07 44.9 6.0 35 66-100 8-42 (264)
331 TIGR00715 precor6x_red precorr 95.9 0.017 3.6E-07 45.5 5.0 72 69-141 2-74 (256)
332 PLN00198 anthocyanidin reducta 95.9 0.046 1E-06 44.9 7.8 36 65-100 7-42 (338)
333 PRK08159 enoyl-(acyl carrier p 95.9 0.046 9.9E-07 43.5 7.5 78 65-142 8-98 (272)
334 PRK08213 gluconate 5-dehydroge 95.9 0.024 5.3E-07 44.5 5.9 77 66-142 11-99 (259)
335 PRK08703 short chain dehydroge 95.8 0.026 5.6E-07 43.8 6.0 35 66-100 5-39 (239)
336 PRK07523 gluconate 5-dehydroge 95.8 0.024 5.3E-07 44.4 5.9 77 66-142 9-97 (255)
337 TIGR00080 pimt protein-L-isoas 95.8 0.13 2.7E-06 39.5 9.6 98 55-161 71-176 (215)
338 KOG1199 Short-chain alcohol de 95.8 0.047 1E-06 39.8 6.6 78 65-142 7-93 (260)
339 PRK14191 bifunctional 5,10-met 95.8 0.16 3.6E-06 40.5 10.3 95 41-164 136-231 (285)
340 PRK12937 short chain dehydroge 95.8 0.037 8E-07 43.0 6.8 34 66-99 4-37 (245)
341 PRK07577 short chain dehydroge 95.8 0.005 1.1E-07 47.6 1.9 73 66-142 2-78 (234)
342 PRK09186 flagellin modificatio 95.8 0.027 5.8E-07 44.1 6.0 38 66-103 3-41 (256)
343 PRK07890 short chain dehydroge 95.8 0.025 5.5E-07 44.3 5.9 35 66-100 4-38 (258)
344 PLN02662 cinnamyl-alcohol dehy 95.8 0.037 8.1E-07 45.0 7.0 36 65-100 2-37 (322)
345 PF01262 AlaDh_PNT_C: Alanine 95.8 0.027 5.9E-07 41.4 5.6 96 66-163 19-140 (168)
346 COG2910 Putative NADH-flavin r 95.8 0.027 5.8E-07 41.5 5.3 90 69-164 2-106 (211)
347 PRK07035 short chain dehydroge 95.8 0.027 6E-07 44.0 5.9 35 66-100 7-41 (252)
348 PRK08594 enoyl-(acyl carrier p 95.8 0.041 8.9E-07 43.4 6.9 34 66-99 6-41 (257)
349 PRK06701 short chain dehydroge 95.7 0.04 8.6E-07 44.3 6.8 35 66-100 45-79 (290)
350 cd01065 NAD_bind_Shikimate_DH 95.7 0.2 4.4E-06 36.0 10.0 92 66-164 18-118 (155)
351 PRK12550 shikimate 5-dehydroge 95.7 0.12 2.6E-06 41.1 9.3 65 65-141 120-187 (272)
352 PF05368 NmrA: NmrA-like famil 95.7 0.023 4.9E-07 44.1 5.2 70 70-142 1-74 (233)
353 PRK08589 short chain dehydroge 95.7 0.031 6.6E-07 44.4 6.0 77 66-142 5-92 (272)
354 PRK13944 protein-L-isoaspartat 95.7 0.14 3E-06 39.0 9.3 96 55-161 66-172 (205)
355 PRK11207 tellurite resistance 95.7 0.016 3.4E-07 43.9 4.1 91 65-161 29-133 (197)
356 PRK12823 benD 1,6-dihydroxycyc 95.7 0.034 7.3E-07 43.7 6.1 77 66-142 7-94 (260)
357 TIGR01472 gmd GDP-mannose 4,6- 95.7 0.039 8.5E-07 45.4 6.7 33 68-100 1-33 (343)
358 PRK13255 thiopurine S-methyltr 95.7 0.028 6.1E-07 43.2 5.3 94 65-161 36-154 (218)
359 PRK07791 short chain dehydroge 95.6 0.059 1.3E-06 43.2 7.4 35 65-99 4-38 (286)
360 PRK06101 short chain dehydroge 95.6 0.031 6.8E-07 43.5 5.6 41 68-108 2-43 (240)
361 PF02254 TrkA_N: TrkA-N domain 95.6 0.083 1.8E-06 36.0 7.2 71 70-142 1-72 (116)
362 PLN02686 cinnamoyl-CoA reducta 95.6 0.048 1E-06 45.5 7.0 42 65-106 51-93 (367)
363 PRK07067 sorbitol dehydrogenas 95.6 0.034 7.4E-07 43.6 5.9 77 66-142 5-90 (257)
364 KOG1200 Mitochondrial/plastidi 95.6 0.058 1.2E-06 40.3 6.4 75 66-141 13-99 (256)
365 PRK14176 bifunctional 5,10-met 95.6 0.26 5.5E-06 39.4 10.5 96 40-164 142-238 (287)
366 PRK08220 2,3-dihydroxybenzoate 95.6 0.049 1.1E-06 42.5 6.6 36 66-101 7-42 (252)
367 PLN00016 RNA-binding protein; 95.6 0.04 8.6E-07 46.1 6.4 94 66-162 51-164 (378)
368 PLN02695 GDP-D-mannose-3',5'-e 95.6 0.043 9.3E-07 45.8 6.5 36 65-100 19-54 (370)
369 PRK08063 enoyl-(acyl carrier p 95.6 0.054 1.2E-06 42.3 6.8 33 66-98 3-35 (250)
370 PRK06172 short chain dehydroge 95.5 0.039 8.5E-07 43.2 5.9 77 66-142 6-94 (253)
371 PRK08945 putative oxoacyl-(acy 95.5 0.036 7.8E-07 43.2 5.7 36 65-100 10-45 (247)
372 PRK08085 gluconate 5-dehydroge 95.5 0.039 8.5E-07 43.2 5.9 77 66-142 8-96 (254)
373 PRK05565 fabG 3-ketoacyl-(acyl 95.5 0.053 1.1E-06 42.1 6.6 35 66-100 4-39 (247)
374 PRK07984 enoyl-(acyl carrier p 95.5 0.094 2E-06 41.5 8.0 35 66-100 5-41 (262)
375 PRK06398 aldose dehydrogenase; 95.5 0.034 7.5E-07 43.8 5.5 35 66-100 5-39 (258)
376 TIGR01809 Shik-DH-AROM shikima 95.5 0.063 1.4E-06 43.0 7.0 73 66-142 124-200 (282)
377 PRK06077 fabG 3-ketoacyl-(acyl 95.5 0.047 1E-06 42.6 6.2 34 66-99 5-38 (252)
378 PRK07985 oxidoreductase; Provi 95.5 0.038 8.2E-07 44.5 5.8 34 66-99 48-81 (294)
379 cd05211 NAD_bind_Glu_Leu_Phe_V 95.5 0.28 6.1E-06 37.7 10.2 33 66-99 22-54 (217)
380 PRK12746 short chain dehydroge 95.5 0.056 1.2E-06 42.3 6.6 33 66-98 5-37 (254)
381 COG0334 GdhA Glutamate dehydro 95.4 0.16 3.5E-06 42.3 9.3 60 34-100 180-239 (411)
382 PRK01438 murD UDP-N-acetylmura 95.4 0.074 1.6E-06 46.0 7.8 68 66-142 15-88 (480)
383 PRK09242 tropinone reductase; 95.4 0.044 9.4E-07 43.0 5.9 35 66-100 8-42 (257)
384 COG0373 HemA Glutamyl-tRNA red 95.4 0.12 2.5E-06 43.5 8.5 71 66-144 177-250 (414)
385 TIGR02197 heptose_epim ADP-L-g 95.4 0.04 8.6E-07 44.6 5.7 72 70-141 1-75 (314)
386 PRK07024 short chain dehydroge 95.4 0.046 9.9E-07 43.0 5.9 39 67-105 2-41 (257)
387 PRK14172 bifunctional 5,10-met 95.4 0.29 6.2E-06 39.0 10.2 95 41-164 137-232 (278)
388 PLN03139 formate dehydrogenase 95.4 0.12 2.6E-06 43.2 8.5 89 66-164 198-293 (386)
389 PRK12827 short chain dehydroge 95.4 0.075 1.6E-06 41.3 7.1 34 66-99 5-38 (249)
390 PRK12745 3-ketoacyl-(acyl-carr 95.4 0.075 1.6E-06 41.6 7.1 33 68-100 3-35 (256)
391 PRK07066 3-hydroxybutyryl-CoA 95.4 0.5 1.1E-05 38.6 11.9 33 67-100 7-39 (321)
392 PF01370 Epimerase: NAD depend 95.4 0.029 6.3E-07 43.3 4.6 73 70-143 1-76 (236)
393 PRK06523 short chain dehydroge 95.4 0.035 7.6E-07 43.6 5.2 35 66-100 8-42 (260)
394 PRK11579 putative oxidoreducta 95.4 0.35 7.6E-06 40.0 11.2 132 68-207 5-142 (346)
395 TIGR03589 PseB UDP-N-acetylglu 95.4 0.068 1.5E-06 43.7 7.0 76 66-142 3-84 (324)
396 PRK12826 3-ketoacyl-(acyl-carr 95.3 0.046 9.9E-07 42.6 5.7 35 66-100 5-39 (251)
397 KOG1252 Cystathionine beta-syn 95.3 0.11 2.3E-06 42.1 7.6 52 65-116 101-156 (362)
398 TIGR01963 PHB_DH 3-hydroxybuty 95.3 0.043 9.3E-07 42.9 5.6 40 67-106 1-41 (255)
399 PRK12935 acetoacetyl-CoA reduc 95.3 0.087 1.9E-06 41.0 7.2 34 66-99 5-38 (247)
400 PRK06997 enoyl-(acyl carrier p 95.3 0.084 1.8E-06 41.7 7.1 77 66-142 5-94 (260)
401 PRK08618 ornithine cyclodeamin 95.3 0.28 6E-06 40.2 10.3 91 65-164 125-223 (325)
402 COG0569 TrkA K+ transport syst 95.3 0.044 9.5E-07 42.4 5.3 76 69-146 2-80 (225)
403 TIGR01777 yfcH conserved hypot 95.3 0.027 5.8E-07 45.0 4.3 66 70-142 1-67 (292)
404 PF03446 NAD_binding_2: NAD bi 95.3 0.088 1.9E-06 38.5 6.7 107 68-184 2-116 (163)
405 PF00106 adh_short: short chai 95.3 0.056 1.2E-06 39.2 5.7 75 68-142 1-90 (167)
406 PLN02214 cinnamoyl-CoA reducta 95.3 0.083 1.8E-06 43.6 7.3 36 65-100 8-43 (342)
407 PRK11036 putative S-adenosyl-L 95.3 0.049 1.1E-06 43.0 5.6 94 66-162 44-149 (255)
408 PRK14177 bifunctional 5,10-met 95.2 0.34 7.3E-06 38.7 10.2 95 41-164 138-233 (284)
409 PRK05855 short chain dehydroge 95.2 0.049 1.1E-06 48.1 6.2 77 66-142 314-402 (582)
410 PRK07856 short chain dehydroge 95.2 0.043 9.4E-07 42.9 5.3 35 66-100 5-39 (252)
411 PRK01581 speE spermidine synth 95.2 0.077 1.7E-06 43.8 6.7 96 65-163 149-269 (374)
412 PRK06124 gluconate 5-dehydroge 95.2 0.057 1.2E-06 42.3 5.9 77 66-142 10-98 (256)
413 PRK13656 trans-2-enoyl-CoA red 95.2 0.16 3.4E-06 42.4 8.5 78 65-143 39-142 (398)
414 PRK06487 glycerate dehydrogena 95.2 0.032 6.9E-07 45.5 4.5 34 66-100 147-180 (317)
415 COG1648 CysG Siroheme synthase 95.2 0.039 8.4E-07 42.1 4.7 93 66-165 11-106 (210)
416 PRK00811 spermidine synthase; 95.2 0.059 1.3E-06 43.2 6.0 95 65-162 75-191 (283)
417 KOG0725 Reductases with broad 95.2 0.061 1.3E-06 42.8 5.9 77 66-142 7-99 (270)
418 PRK14967 putative methyltransf 95.2 0.071 1.5E-06 41.1 6.2 89 65-161 35-158 (223)
419 PLN02928 oxidoreductase family 95.1 0.11 2.4E-06 42.9 7.6 92 66-163 158-263 (347)
420 PRK14190 bifunctional 5,10-met 95.1 0.37 8.1E-06 38.5 10.2 95 41-164 137-232 (284)
421 PRK06522 2-dehydropantoate 2-r 95.1 0.19 4.1E-06 40.6 8.9 91 69-162 2-100 (304)
422 COG2519 GCD14 tRNA(1-methylade 95.1 0.26 5.6E-06 38.4 8.9 103 55-166 88-199 (256)
423 PRK14169 bifunctional 5,10-met 95.1 0.39 8.4E-06 38.3 10.2 95 41-164 135-230 (282)
424 smart00846 Gp_dh_N Glyceraldeh 95.1 0.15 3.2E-06 36.7 7.3 96 69-165 2-121 (149)
425 PLN02427 UDP-apiose/xylose syn 95.1 0.096 2.1E-06 43.9 7.3 75 66-141 13-95 (386)
426 PRK14179 bifunctional 5,10-met 95.1 0.38 8.3E-06 38.4 10.1 94 41-164 137-232 (284)
427 KOG1208 Dehydrogenases with di 95.1 0.061 1.3E-06 43.7 5.8 42 65-106 33-75 (314)
428 PRK07201 short chain dehydroge 95.1 0.066 1.4E-06 48.2 6.6 77 66-142 370-458 (657)
429 PRK15181 Vi polysaccharide bio 95.1 0.045 9.8E-07 45.2 5.2 46 48-99 2-47 (348)
430 cd01079 NAD_bind_m-THF_DH NAD 95.0 0.44 9.6E-06 35.7 9.7 121 40-164 31-158 (197)
431 PRK06128 oxidoreductase; Provi 95.0 0.067 1.5E-06 43.2 6.0 34 66-99 54-87 (300)
432 PLN02366 spermidine synthase 95.0 0.065 1.4E-06 43.5 5.8 96 65-162 90-206 (308)
433 TIGR03466 HpnA hopanoid-associ 95.0 0.048 1E-06 44.4 5.1 71 69-142 2-74 (328)
434 PRK06113 7-alpha-hydroxysteroi 95.0 0.072 1.6E-06 41.8 6.0 77 66-142 10-98 (255)
435 TIGR01214 rmlD dTDP-4-dehydror 95.0 0.05 1.1E-06 43.5 5.1 32 69-100 1-32 (287)
436 PRK14180 bifunctional 5,10-met 95.0 0.45 9.8E-06 38.0 10.2 96 40-164 136-232 (282)
437 COG1179 Dinucleotide-utilizing 94.9 0.059 1.3E-06 41.5 5.0 32 66-98 29-61 (263)
438 COG1052 LdhA Lactate dehydroge 94.9 0.36 7.7E-06 39.5 9.8 89 65-164 144-238 (324)
439 PRK14173 bifunctional 5,10-met 94.9 0.45 9.8E-06 38.1 10.1 95 41-164 134-229 (287)
440 PRK13581 D-3-phosphoglycerate 94.9 0.1 2.3E-06 45.7 7.1 86 66-162 139-230 (526)
441 PRK08303 short chain dehydroge 94.9 0.06 1.3E-06 43.7 5.3 35 66-100 7-41 (305)
442 PRK07832 short chain dehydroge 94.9 0.072 1.6E-06 42.2 5.7 75 68-142 1-88 (272)
443 TIGR01181 dTDP_gluc_dehyt dTDP 94.9 0.082 1.8E-06 42.7 6.1 74 69-142 1-83 (317)
444 TIGR01179 galE UDP-glucose-4-e 94.9 0.098 2.1E-06 42.4 6.6 31 69-99 1-31 (328)
445 PRK07402 precorrin-6B methylas 94.8 0.26 5.7E-06 37.1 8.4 101 55-164 34-144 (196)
446 PLN02240 UDP-glucose 4-epimera 94.8 0.11 2.3E-06 42.9 6.9 34 66-99 4-37 (352)
447 PRK06249 2-dehydropantoate 2-r 94.8 0.35 7.5E-06 39.4 9.7 94 66-162 4-106 (313)
448 PRK14187 bifunctional 5,10-met 94.8 0.49 1.1E-05 38.0 10.1 96 40-164 138-234 (294)
449 PRK14106 murD UDP-N-acetylmura 94.8 0.11 2.4E-06 44.5 7.1 69 66-142 4-78 (450)
450 PRK14178 bifunctional 5,10-met 94.8 0.44 9.6E-06 38.0 9.7 95 41-164 131-226 (279)
451 PRK14166 bifunctional 5,10-met 94.8 0.55 1.2E-05 37.5 10.2 96 40-164 135-231 (282)
452 cd05191 NAD_bind_amino_acid_DH 94.8 0.34 7.3E-06 31.2 7.7 33 66-99 22-55 (86)
453 PLN02583 cinnamoyl-CoA reducta 94.8 0.073 1.6E-06 43.0 5.5 36 65-100 4-39 (297)
454 PRK14170 bifunctional 5,10-met 94.8 0.52 1.1E-05 37.6 10.1 95 41-164 136-231 (284)
455 PF06325 PrmA: Ribosomal prote 94.8 0.017 3.7E-07 46.4 1.8 93 65-166 160-263 (295)
456 TIGR00477 tehB tellurite resis 94.8 0.044 9.4E-07 41.4 4.0 91 65-162 29-133 (195)
457 PRK07574 formate dehydrogenase 94.8 0.13 2.8E-06 43.1 7.0 88 66-163 191-285 (385)
458 PRK07340 ornithine cyclodeamin 94.8 0.37 8.1E-06 39.1 9.5 90 65-164 123-219 (304)
459 PRK07102 short chain dehydroge 94.7 0.083 1.8E-06 41.1 5.7 33 68-100 2-34 (243)
460 KOG1203 Predicted dehydrogenas 94.7 0.16 3.6E-06 42.5 7.5 36 65-100 77-112 (411)
461 PF01113 DapB_N: Dihydrodipico 94.7 0.041 8.8E-07 38.3 3.5 89 69-163 2-98 (124)
462 PLN02244 tocopherol O-methyltr 94.7 0.082 1.8E-06 43.6 5.8 95 65-162 117-223 (340)
463 PRK03659 glutathione-regulated 94.7 0.11 2.4E-06 46.4 6.9 93 67-161 400-497 (601)
464 PRK08416 7-alpha-hydroxysteroi 94.7 0.097 2.1E-06 41.2 6.0 34 66-99 7-40 (260)
465 PF08659 KR: KR domain; Inter 94.7 0.16 3.5E-06 37.7 6.9 32 69-100 2-34 (181)
466 PLN03075 nicotianamine synthas 94.7 0.2 4.3E-06 40.3 7.6 96 65-162 122-233 (296)
467 COG0031 CysK Cysteine synthase 94.7 0.19 4.1E-06 40.3 7.5 58 55-118 55-116 (300)
468 PRK03562 glutathione-regulated 94.7 0.12 2.5E-06 46.4 7.0 92 67-160 400-496 (621)
469 PRK06123 short chain dehydroge 94.7 0.15 3.3E-06 39.6 7.0 32 67-98 2-33 (248)
470 PRK11908 NAD-dependent epimera 94.7 0.12 2.6E-06 42.6 6.7 73 68-141 2-77 (347)
471 PRK07819 3-hydroxybutyryl-CoA 94.7 1.4 3.1E-05 35.4 12.6 37 68-105 6-43 (286)
472 PRK14103 trans-aconitate 2-met 94.7 0.21 4.6E-06 39.3 7.8 89 65-161 28-125 (255)
473 PLN00203 glutamyl-tRNA reducta 94.7 0.27 5.9E-06 42.9 8.9 71 66-143 265-340 (519)
474 PF01118 Semialdhyde_dh: Semia 94.6 0.052 1.1E-06 37.5 3.8 90 69-163 1-98 (121)
475 PF04321 RmlD_sub_bind: RmlD s 94.6 0.033 7.2E-07 44.7 3.2 32 69-100 2-33 (286)
476 PRK07370 enoyl-(acyl carrier p 94.6 0.13 2.9E-06 40.5 6.6 34 66-99 5-40 (258)
477 PRK07889 enoyl-(acyl carrier p 94.6 0.1 2.2E-06 41.1 5.8 77 66-142 6-95 (256)
478 PRK15116 sulfur acceptor prote 94.6 0.16 3.4E-06 40.3 6.8 33 66-99 29-62 (268)
479 PRK14186 bifunctional 5,10-met 94.6 0.64 1.4E-05 37.4 10.2 95 41-164 137-232 (297)
480 PRK12749 quinate/shikimate deh 94.6 0.36 7.8E-06 38.8 9.0 34 66-100 123-157 (288)
481 PRK10637 cysG siroheme synthas 94.6 0.17 3.8E-06 43.5 7.6 92 66-164 11-105 (457)
482 PRK14183 bifunctional 5,10-met 94.6 0.64 1.4E-05 37.1 10.1 95 41-164 136-231 (281)
483 PLN02166 dTDP-glucose 4,6-dehy 94.6 0.19 4.1E-06 43.0 7.7 36 65-100 118-153 (436)
484 PRK06171 sorbitol-6-phosphate 94.6 0.088 1.9E-06 41.5 5.5 35 66-100 8-42 (266)
485 PLN02256 arogenate dehydrogena 94.5 0.36 7.9E-06 39.1 8.9 90 65-163 34-128 (304)
486 PRK08655 prephenate dehydrogen 94.5 0.16 3.4E-06 43.5 7.1 86 69-163 2-93 (437)
487 PLN02516 methylenetetrahydrofo 94.5 0.67 1.4E-05 37.3 10.2 96 40-164 145-241 (299)
488 PRK10669 putative cation:proto 94.5 0.18 3.9E-06 44.6 7.7 74 67-142 417-491 (558)
489 PF08704 GCD14: tRNA methyltra 94.5 0.052 1.1E-06 42.4 3.9 107 53-166 32-150 (247)
490 PRK05708 2-dehydropantoate 2-r 94.5 0.29 6.4E-06 39.7 8.4 93 68-162 3-104 (305)
491 KOG1502 Flavonol reductase/cin 94.5 0.14 3.1E-06 41.5 6.4 76 66-142 5-88 (327)
492 PLN02778 3,5-epimerase/4-reduc 94.5 0.25 5.4E-06 39.9 8.0 52 65-116 7-63 (298)
493 PRK12814 putative NADPH-depend 94.5 0.18 3.8E-06 45.5 7.6 76 65-142 191-288 (652)
494 PRK07417 arogenate dehydrogena 94.4 0.17 3.8E-06 40.4 6.9 87 69-164 2-93 (279)
495 TIGR01289 LPOR light-dependent 94.4 0.11 2.4E-06 42.3 5.8 76 67-142 3-91 (314)
496 PRK08125 bifunctional UDP-gluc 94.4 0.13 2.8E-06 46.5 6.7 36 65-100 313-349 (660)
497 COG2264 PrmA Ribosomal protein 94.4 0.4 8.6E-06 38.6 8.7 97 65-166 161-267 (300)
498 PRK08936 glucose-1-dehydrogena 94.4 0.13 2.9E-06 40.4 6.2 34 66-99 6-39 (261)
499 PRK09135 pteridine reductase; 94.4 0.096 2.1E-06 40.7 5.3 35 66-100 5-39 (249)
500 PRK06924 short chain dehydroge 94.4 0.086 1.9E-06 41.1 5.0 33 68-100 2-34 (251)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.6e-42 Score=274.37 Aligned_cols=228 Identities=27% Similarity=0.375 Sum_probs=205.8
Q ss_pred CcccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHH
Q 045248 1 MCNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVG 80 (240)
Q Consensus 1 ~c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG 80 (240)
+|++....++..+|+|+||+++++++++++|+++++++||.+.|+..|.|+++ +..++ +||++|+|+| .||+|
T Consensus 107 ~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-k~~~~-----~pG~~V~I~G-~GGlG 179 (339)
T COG1064 107 LCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKANV-----KPGKWVAVVG-AGGLG 179 (339)
T ss_pred cCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-hhcCC-----CCCCEEEEEC-CcHHH
Confidence 58888888999999999999999999999999999999999999999999999 66888 9999999999 78999
Q ss_pred HHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEE
Q 045248 81 HYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKV 158 (240)
Q Consensus 81 ~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~i 158 (240)
++++|+|+++|++|++++++ ++.+.++++|++++++.++++ ...+.. .+|+++|+++..++..++++|+++|++
T Consensus 180 h~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~----~~d~ii~tv~~~~~~~~l~~l~~~G~~ 255 (339)
T COG1064 180 HMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKE----IADAIIDTVGPATLEPSLKALRRGGTL 255 (339)
T ss_pred HHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHh----hCcEEEECCChhhHHHHHHHHhcCCEE
Confidence 99999999999999999975 899999999999999977443 222322 299999999966699999999999999
Q ss_pred EEeCCCc-hHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEE
Q 045248 159 IDITPGP-SAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKII 237 (240)
Q Consensus 159 v~~g~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 237 (240)
+++|.+. ....+++...+.++++++.|+.. .++.++++++++..+|++++.+...++++++++||+.|.+++..||.|
T Consensus 256 v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~-g~~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~V 334 (339)
T COG1064 256 VLVGLPGGGPIPLLPAFLLILKEISIVGSLV-GTRADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAV 334 (339)
T ss_pred EEECCCCCcccCCCCHHHhhhcCeEEEEEec-CCHHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEE
Confidence 9999874 55455667778899999999885 789999999999999999999977999999999999999999999999
Q ss_pred EeC
Q 045248 238 VEP 240 (240)
Q Consensus 238 l~~ 240 (240)
+++
T Consensus 335 i~~ 337 (339)
T COG1064 335 IDM 337 (339)
T ss_pred ecC
Confidence 874
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=3e-39 Score=261.06 Aligned_cols=224 Identities=32% Similarity=0.448 Sum_probs=189.4
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
.+|+|+||+.+|++.++++|+++|+++||+++++++|||+++....++ ++|++|||+||+|++|++++|+||++|
T Consensus 93 ~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l-----~~g~~VLV~gaaGgVG~~aiQlAk~~G 167 (326)
T COG0604 93 RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGL-----KPGETVLVHGAAGGVGSAAIQLAKALG 167 (326)
T ss_pred CCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCEEEEecCCchHHHHHHHHHHHcC
Confidence 679999999999999999999999999999999999999999998888 899999999999999999999999999
Q ss_pred CEEEEE-eCcccHHHHHhcCCCEEEeCCCCc-cc-cccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCc-hH
Q 045248 92 THVTAS-CGARNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGP-SA 167 (240)
Q Consensus 92 ~~v~~~-~~~~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~-~~ 167 (240)
+.++++ +++++.++++++|+++++++++.+ .. ..+.+++.++|+|+|++|++.+..++++|+++|+++.+|... ..
T Consensus 168 ~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g~~ 247 (326)
T COG0604 168 ATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSGGP 247 (326)
T ss_pred CcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCCCC
Confidence 754444 466777899999999999998887 23 346677789999999999999999999999999999999866 33
Q ss_pred HHHHHHhhheeccceeeeEEEcCC-----HHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHc-CCCcccEEEeC
Q 045248 168 MLTFALKKLTFSKKQLVPLLLIPK-----RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESID-GHATGKIIVEP 240 (240)
Q Consensus 168 ~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvl~~ 240 (240)
...++...+..+..+..+...... .+.+.++.+++++|++++.++.+||++|..++...... ++..||+|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 248 PVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred ccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 333444555566666666655433 56788999999999999999999999995444444443 58899999975
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=6.5e-37 Score=228.23 Aligned_cols=231 Identities=28% Similarity=0.336 Sum_probs=199.5
Q ss_pred ceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHH
Q 045248 5 WRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAV 84 (240)
Q Consensus 5 ~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~ 84 (240)
.++......|.|+|+..+|...+.++|+.++++++|++.+.++|||..+++..++ ++|++|||+.|+||+|++++
T Consensus 90 DrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~v-----kpGhtVlvhaAAGGVGlll~ 164 (336)
T KOG1197|consen 90 DRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNV-----KPGHTVLVHAAAGGVGLLLC 164 (336)
T ss_pred cEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCEEEEEeccccHHHHHH
Confidence 4455666889999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-c-ccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEe
Q 045248 85 QLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD-G-AALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 85 ~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~ 161 (240)
|+++..|+++|++++. ++++.+++.|+++.|++..++ . ...+.+++.|+|+++|++|.+++...+.+|++.|++|.+
T Consensus 165 Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSf 244 (336)
T KOG1197|consen 165 QLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSF 244 (336)
T ss_pred HHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEe
Confidence 9999999999988865 899999999999999999888 3 344678899999999999999999999999999999999
Q ss_pred CCCchHHHHHHHhhheeccceeeeEEE---cCCHH----HHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcc
Q 045248 162 TPGPSAMLTFALKKLTFSKKQLVPLLL---IPKRE----NLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATG 234 (240)
Q Consensus 162 g~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~g 234 (240)
|..+....+++...++.+..++..-++ ...+. ...+++.++.+|.++..|.++|||+++.+|+..++++...|
T Consensus 245 G~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvG 324 (336)
T KOG1197|consen 245 GNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVG 324 (336)
T ss_pred ccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccc
Confidence 976655555555555555544332222 12222 35688899999999999999999999999999999999999
Q ss_pred cEEEeC
Q 045248 235 KIIVEP 240 (240)
Q Consensus 235 kvvl~~ 240 (240)
|+++.+
T Consensus 325 kvlLlp 330 (336)
T KOG1197|consen 325 KVLLLP 330 (336)
T ss_pred eEEEeC
Confidence 999864
No 4
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=6.9e-36 Score=241.68 Aligned_cols=226 Identities=36% Similarity=0.519 Sum_probs=187.9
Q ss_pred ccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhh------CCCcCCCCCCCeEEEEcCCchHHHH
Q 045248 9 VSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSA------GVKLDGSGQQKNILVTAASGGVGHY 82 (240)
Q Consensus 9 ~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~~~~~~g~~vlV~G~~g~vG~~ 82 (240)
.....|+|+||+++|+..++++|++++++++|++|.++.|||+++.... ++ ++|++|||+||+|++|++
T Consensus 99 ~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~-----~~g~~vLv~ggsggVG~~ 173 (347)
T KOG1198|consen 99 AFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKL-----SKGKSVLVLGGSGGVGTA 173 (347)
T ss_pred eccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhcccccccccc-----CCCCeEEEEeCCcHHHHH
Confidence 4456799999999999999999999999999999999999999998888 78 899999999999999999
Q ss_pred HHHHHHhCC-CEEEEEeCcccHHHHHhcCCCEEEeCCCCc-cccc-cCCCCCcccEEEeCCCCCCccccccCCCCCcEEE
Q 045248 83 AVQLAKLGN-THVTASCGARNIEFVKSLGADEVLDYKTPD-GAAL-KSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVI 159 (240)
Q Consensus 83 ~~~~a~~~g-~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~-~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv 159 (240)
++|+|+++| ++|+++++.++.+.++++|+++++||++++ ...+ ..+ +.+||+||||+|+.+......++...|+..
T Consensus 174 aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~ 252 (347)
T KOG1198|consen 174 AIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYT-GKGVDVVLDCVGGSTLTKSLSCLLKGGGGA 252 (347)
T ss_pred HHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CCCccEEEECCCCCccccchhhhccCCceE
Confidence 999999999 588888899999999999999999999977 2333 344 889999999999988888888888887644
Q ss_pred EeCCCchHHHHH------------HHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHH
Q 045248 160 DITPGPSAMLTF------------ALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAES 227 (240)
Q Consensus 160 ~~g~~~~~~~~~------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~ 227 (240)
.++......... .......++.........++.+.++.+.++++.+++++.+.+.||++++++|++.+
T Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~ 332 (347)
T KOG1198|consen 253 YIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKL 332 (347)
T ss_pred EEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHH
Confidence 443211100000 11122233334444444678999999999999999999999999999999999999
Q ss_pred HcCCCcccEEEeC
Q 045248 228 IDGHATGKIIVEP 240 (240)
Q Consensus 228 ~~~~~~gkvvl~~ 240 (240)
.++..+||+++.+
T Consensus 333 ~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 333 EKSHATGKVVLEK 345 (347)
T ss_pred hhcCCcceEEEEe
Confidence 9999999999864
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-35 Score=228.97 Aligned_cols=228 Identities=19% Similarity=0.255 Sum_probs=191.5
Q ss_pred cccceeccc-CCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHH
Q 045248 2 CNLWRIDVS-HNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVG 80 (240)
Q Consensus 2 c~~~~~~~~-~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG 80 (240)
|++..+-+. +.+|++++|++++++.++|+||++|++++|++.- +.+++|+. +++++ +.|.+|||+| +|++|
T Consensus 111 Cp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~eP-LsV~~HAc-r~~~v-----k~Gs~vLV~G-AGPIG 182 (354)
T KOG0024|consen 111 CPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEP-LSVGVHAC-RRAGV-----KKGSKVLVLG-AGPIG 182 (354)
T ss_pred CCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccc-hhhhhhhh-hhcCc-----ccCCeEEEEC-CcHHH
Confidence 555555444 4479999999999999999999999999999932 45999999 89999 9999999999 99999
Q ss_pred HHHHHHHHhCCC-EEEEEe-CcccHHHHHhcCCCEEEeCCCCc-cc----ccc-CCCCCcccEEEeCCCC-CCccccccC
Q 045248 81 HYAVQLAKLGNT-HVTASC-GARNIEFVKSLGADEVLDYKTPD-GA----ALK-SPSGRKYDAVIHCATG-IPWSTFEPN 151 (240)
Q Consensus 81 ~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~-~~----~~~-~~~~~~~d~v~d~~g~-~~~~~~~~~ 151 (240)
+++...||++|+ +|+.++ .+.|++.++++|++.+.+....+ .. .++ ..+...+|+.|||+|. .+++.++..
T Consensus 183 l~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a 262 (354)
T KOG0024|consen 183 LLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKA 262 (354)
T ss_pred HHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHH
Confidence 999999999999 888888 46899999999999887655433 11 122 2333569999999997 459999999
Q ss_pred CCCCcEEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHc
Q 045248 152 LGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESID 229 (240)
Q Consensus 152 l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~ 229 (240)
++.+|++++.|+..+ ...++......++++++|++ .+.+.+|+.+++++++|++. +++|++|++++..+||+.+.+
T Consensus 263 ~r~gGt~vlvg~g~~-~~~fpi~~v~~kE~~~~g~f-ry~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~ 340 (354)
T KOG0024|consen 263 TRSGGTVVLVGMGAE-EIQFPIIDVALKEVDLRGSF-RYCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQH 340 (354)
T ss_pred hccCCEEEEeccCCC-ccccChhhhhhheeeeeeee-eeccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHh
Confidence 999999999987654 45677788889999999987 57788999999999999865 799999999999999999998
Q ss_pred CCCc-ccEEEe
Q 045248 230 GHAT-GKIIVE 239 (240)
Q Consensus 230 ~~~~-gkvvl~ 239 (240)
++.. -|++++
T Consensus 341 ~~~~~iKv~i~ 351 (354)
T KOG0024|consen 341 GEEGVIKVIIT 351 (354)
T ss_pred CcCCceEEEEe
Confidence 8743 377765
No 6
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-35 Score=227.26 Aligned_cols=229 Identities=24% Similarity=0.337 Sum_probs=193.3
Q ss_pred Ccc--cceecccCCC-----cccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEE
Q 045248 1 MCN--LWRIDVSHNG-----GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT 73 (240)
Q Consensus 1 ~c~--~~~~~~~~~~-----G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ 73 (240)
+|+ .+.+.+...+ |+|++|+++++.++++||++++.++||.+.|+..|+|+.| .+.++ .||+++.|.
T Consensus 115 yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~-----~pG~~vgI~ 188 (360)
T KOG0023|consen 115 YCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGL-----GPGKWVGIV 188 (360)
T ss_pred cCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCC-----CCCcEEEEe
Confidence 577 5555555444 5599999999999999999999999999999999999999 88888 899999999
Q ss_pred cCCchHHHHHHHHHHhCCCEEEEEeCc--ccHHHHHhcCCCEEEeCCCC-c-cccccCCCCCcccEEEeCCCCCCccccc
Q 045248 74 AASGGVGHYAVQLAKLGNTHVTASCGA--RNIEFVKSLGADEVLDYKTP-D-GAALKSPSGRKYDAVIHCATGIPWSTFE 149 (240)
Q Consensus 74 G~~g~vG~~~~~~a~~~g~~v~~~~~~--~~~~~~~~~g~~~v~~~~~~-~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~ 149 (240)
| .||+|++++|+||++|.+|++++++ ++.+.++.+|++..++..++ + -+.+..+-..++|-+.+. ....+..++
T Consensus 189 G-lGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~ 266 (360)
T KOG0023|consen 189 G-LGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNL-AEHALEPLL 266 (360)
T ss_pred c-CcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeec-cccchHHHH
Confidence 9 6779999999999999999999975 56666688999998887743 3 223333333444444444 335589999
Q ss_pred cCCCCCcEEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHc
Q 045248 150 PNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESID 229 (240)
Q Consensus 150 ~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~ 229 (240)
.+++++|++|.+|.+.. +..++...+.+.++.|.|+.. .++.+.+++++++..+.+++.++ ..+++++++||+.+.+
T Consensus 267 ~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~v-G~~ket~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~k 343 (360)
T KOG0023|consen 267 GLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIV-GSRKETQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEK 343 (360)
T ss_pred HHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeecc-ccHHHHHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHh
Confidence 99999999999998876 677778888899999999886 89999999999999999999886 8899999999999999
Q ss_pred CCCcccEEEeC
Q 045248 230 GHATGKIIVEP 240 (240)
Q Consensus 230 ~~~~gkvvl~~ 240 (240)
++..+|.|+++
T Consensus 344 gdV~yRfVvD~ 354 (360)
T KOG0023|consen 344 GDVRYRFVVDV 354 (360)
T ss_pred cCeeEEEEEEc
Confidence 99999999864
No 7
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=4.7e-34 Score=234.28 Aligned_cols=217 Identities=17% Similarity=0.221 Sum_probs=178.2
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
.+|+|+||++++++.++++|+++++++++.. ..+.++|+++ ..... .++++|+|+| +|++|++++|+|+.+|
T Consensus 122 ~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~al-~~~~~-----~~g~~VlV~G-~G~vG~~aiqlak~~G 193 (343)
T PRK09880 122 VDGGFTRYKVVDTAQCIPYPEKADEKVMAFA-EPLAVAIHAA-HQAGD-----LQGKRVFVSG-VGPIGCLIVAAVKTLG 193 (343)
T ss_pred CCCceeeeEEechHHeEECCCCCCHHHHHhh-cHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 4799999999999999999999998876543 4556999999 44455 5799999999 6999999999999999
Q ss_pred C-EEEEEeC-cccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCchHH
Q 045248 92 T-HVTASCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGPSAM 168 (240)
Q Consensus 92 ~-~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~ 168 (240)
+ +|+++++ +++++.++++|++.++++++.+........ .++|++||++|++ .+..++++++++|+++.+|.... .
T Consensus 194 ~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~-g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~ 271 (343)
T PRK09880 194 AAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEK-GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA-P 271 (343)
T ss_pred CcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccC-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-C
Confidence 9 6888885 589999999999999987765532222222 3699999999985 58899999999999999996433 2
Q ss_pred HHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 169 LTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 169 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
.+++...+..++.++.+++. ..+.++++++++++|++++ +++++|+++|+++||+.+.++...||+++.+
T Consensus 272 ~~~~~~~~~~k~~~i~g~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 272 PEFPMMTLIVKEISLKGSFR--FTEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred CccCHHHHHhCCcEEEEEee--ccccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 23445556688888988764 3567999999999999875 7789999999999999999888789999875
No 8
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2e-33 Score=229.12 Aligned_cols=220 Identities=19% Similarity=0.189 Sum_probs=183.5
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHH
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGH 81 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~ 81 (240)
|++..+.+...+|+|+||+.+++..++++|+++++++++.+++.+.|||+++ ...++ ++|++|||+| +|++|+
T Consensus 107 c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~-----~~g~~VlV~G-~g~iG~ 179 (329)
T TIGR02822 107 CPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-LRASL-----PPGGRLGLYG-FGGSAH 179 (329)
T ss_pred CCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-HhcCC-----CCCCEEEEEc-CCHHHH
Confidence 4554555555689999999999999999999999999999999999999999 46777 8999999999 599999
Q ss_pred HHHHHHHhCCCEEEEEeC-cccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEE
Q 045248 82 YAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVI 159 (240)
Q Consensus 82 ~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv 159 (240)
+++|+|+.+|++|+++++ +++++.++++|+++++++.+.. .+++|+++++.+. ..+..++++++++|+++
T Consensus 180 ~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~--------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v 251 (329)
T TIGR02822 180 LTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP--------PEPLDAAILFAPAGGLVPPALEALDRGGVLA 251 (329)
T ss_pred HHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC--------cccceEEEECCCcHHHHHHHHHhhCCCcEEE
Confidence 999999999999998886 4889999999999998754321 2468999988875 45889999999999999
Q ss_pred EeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 160 DITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 160 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
.+|........++...+.+++.++.+++. ..++.+.+++++++++++++ ++++|+|+|+++||+.+.+++..||+|+
T Consensus 252 ~~G~~~~~~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 252 VAGIHLTDTPPLNYQRHLFYERQIRSVTS-NTRADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred EEeccCccCCCCCHHHHhhCCcEEEEeec-CCHHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 99964322222334455577888888763 56778999999999999974 5789999999999999999999999987
No 9
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.3e-33 Score=231.50 Aligned_cols=222 Identities=23% Similarity=0.309 Sum_probs=185.2
Q ss_pred ccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHH
Q 045248 9 VSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 88 (240)
Q Consensus 9 ~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~ 88 (240)
+...+|+|+||+.++++.++++|+++++++++++++++.|||+++ ...++ .+|++|||+| +|++|++++|+|+
T Consensus 112 g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~~~~-----~~g~~vlV~G-~G~vG~~~~~~ak 184 (339)
T cd08239 112 GWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGV-----SGRDTVLVVG-AGPVGLGALMLAR 184 (339)
T ss_pred ccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHH
Confidence 444579999999999999999999999999999999999999999 56677 7899999998 6999999999999
Q ss_pred hCCCE-EEEEeCc-ccHHHHHhcCCCEEEeCCCCcccc-ccCCCCCcccEEEeCCCCCC-ccccccCCCCCcEEEEeCCC
Q 045248 89 LGNTH-VTASCGA-RNIEFVKSLGADEVLDYKTPDGAA-LKSPSGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 89 ~~g~~-v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~-~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~ 164 (240)
.+|++ |++++++ ++.+.++++|++.++++.+.+... .+.+.+.++|++||++|+.. +..++++++++|+++.+|..
T Consensus 185 ~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 264 (339)
T cd08239 185 ALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEG 264 (339)
T ss_pred HcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCC
Confidence 99997 9988864 788999999999999876543222 23445568999999999865 57889999999999999865
Q ss_pred chHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 165 PSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
...... ....+.++++++.+++. .+.+.++++++++++|+++ ++++++|+++++++||+.+.++. .||+|+++
T Consensus 265 ~~~~~~-~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 265 GELTIE-VSNDLIRKQRTLIGSWY-FSVPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred CCcccC-cHHHHHhCCCEEEEEec-CCHHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 432211 12345678889998774 4677899999999999986 47889999999999999998876 79999874
No 10
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-33 Score=231.46 Aligned_cols=222 Identities=24% Similarity=0.294 Sum_probs=181.4
Q ss_pred cccceEEEecCCc--ee--eCCCCCChh-hhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHH
Q 045248 14 GGLAEFAVAKESS--TV--ARPSEVSAA-EGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 88 (240)
Q Consensus 14 G~~~e~~~v~~~~--~~--~ip~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~ 88 (240)
|+|+||++++++. ++ ++|++++++ +++++++++.|||+++.+..++ ++|++|||+|++|++|++++|+|+
T Consensus 106 ~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~-----~~g~~VlV~GaaG~vG~~aiqlAk 180 (348)
T PLN03154 106 TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSP-----KKGDSVFVSAASGAVGQLVGQLAK 180 (348)
T ss_pred CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCC-----CCCCEEEEecCccHHHHHHHHHHH
Confidence 7899999998853 54 459999987 6888899999999999777888 899999999988999999999999
Q ss_pred hCCCEEEEEeCc-ccHHHHH-hcCCCEEEeCCCC-c-cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 89 LGNTHVTASCGA-RNIEFVK-SLGADEVLDYKTP-D-GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 89 ~~g~~v~~~~~~-~~~~~~~-~~g~~~v~~~~~~-~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
.+|++|++++++ ++.+.++ ++|++.++++.+. + ...+....++++|++||++|+..+..++++++++|+++.+|..
T Consensus 181 ~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~ 260 (348)
T PLN03154 181 LHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMV 260 (348)
T ss_pred HcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECcc
Confidence 999999988864 7888887 7999999998653 3 2233332346899999999987888999999999999999964
Q ss_pred chHHH-----HHHHhhheeccceeeeEEEcC----CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCccc
Q 045248 165 PSAML-----TFALKKLTFSKKQLVPLLLIP----KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGK 235 (240)
Q Consensus 165 ~~~~~-----~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gk 235 (240)
..... ..+...+..+++++.+++... ..+.++++++++++|++++.++.+|+|+++++||+.+.+++..||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GK 340 (348)
T PLN03154 261 SLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGK 340 (348)
T ss_pred ccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCce
Confidence 32211 112334567788888876421 245688899999999999888889999999999999999999999
Q ss_pred EEEeC
Q 045248 236 IIVEP 240 (240)
Q Consensus 236 vvl~~ 240 (240)
+|+++
T Consensus 341 vVl~~ 345 (348)
T PLN03154 341 QVIRV 345 (348)
T ss_pred EEEEe
Confidence 99874
No 11
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=5.1e-33 Score=229.27 Aligned_cols=218 Identities=19% Similarity=0.256 Sum_probs=177.9
Q ss_pred CCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhC
Q 045248 11 HNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLG 90 (240)
Q Consensus 11 ~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~ 90 (240)
..+|+|+||++++++.++++|+++++++++++++.+.|+|+++.....+ ++|++|+|.| +|++|++++|+|+.+
T Consensus 133 ~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~-----~~g~~VlV~G-~G~vG~~avq~Ak~~ 206 (360)
T PLN02586 133 KNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMT-----EPGKHLGVAG-LGGLGHVAVKIGKAF 206 (360)
T ss_pred cCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhccc-----CCCCEEEEEC-CCHHHHHHHHHHHHC
Confidence 3479999999999999999999999999999999999999999666656 7899999988 799999999999999
Q ss_pred CCEEEEEeC-cc-cHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCchH
Q 045248 91 NTHVTASCG-AR-NIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGPSA 167 (240)
Q Consensus 91 g~~v~~~~~-~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~ 167 (240)
|++|++++. ++ +.+.++++|++.++++.+.+ ...+.+ + ++|++||++|.. .+..++++++++|+++.+|....
T Consensus 207 Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~-~~~~~~-~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~- 282 (360)
T PLN02586 207 GLKVTVISSSSNKEDEAINRLGADSFLVSTDPE-KMKAAI-G-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK- 282 (360)
T ss_pred CCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHH-HHHhhc-C-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC-
Confidence 999888774 34 45666899999998765432 112222 2 699999999974 58889999999999999986432
Q ss_pred HHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 168 MLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 168 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
...++...+..++..+.+++. .....++++++++++|++++.+ ++|+|+|+++||+.+.+++..||+|+++
T Consensus 283 ~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 283 PLELPIFPLVLGRKLVGGSDI-GGIKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred CCccCHHHHHhCCeEEEEcCc-CCHHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 223344445566777777653 4667899999999999998766 5899999999999999998889999874
No 12
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=4.1e-33 Score=230.98 Aligned_cols=219 Identities=21% Similarity=0.255 Sum_probs=184.2
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|+||++++++.++++|+++++++++++++.+.|||+++.+..++ +++++|||.| +|++|++++|+|+.+|+
T Consensus 143 ~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i-----~~g~~VlV~G-~G~vG~~a~~lak~~G~ 216 (371)
T cd08281 143 VSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGV-----RPGQSVAVVG-LGGVGLSALLGAVAAGA 216 (371)
T ss_pred cccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 37999999999999999999999999999999999999998777888 8999999999 79999999999999999
Q ss_pred -EEEEEeC-cccHHHHHhcCCCEEEeCCCCc-cccc-cCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCch-
Q 045248 93 -HVTASCG-ARNIEFVKSLGADEVLDYKTPD-GAAL-KSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGPS- 166 (240)
Q Consensus 93 -~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~-~~~~-~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~- 166 (240)
+|+++++ +++++.++++|++.++++.+.+ ...+ +.+.+ ++|++|||+|.. .+..++++++++|+++.+|....
T Consensus 217 ~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~ 295 (371)
T cd08281 217 SQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE 295 (371)
T ss_pred CcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC
Confidence 7988886 4889999999999999876654 2223 33343 899999999974 58889999999999999996532
Q ss_pred HHHHHHHhhheeccceeeeEEEc--CCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 167 AMLTFALKKLTFSKKQLVPLLLI--PKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
....++...+..+++++.+++.. ...++++++++++++|++++ +++++|+|+|+++||+.+.+++..+|+|+
T Consensus 296 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 296 ARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred ceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 22334455667788999997642 13578999999999999874 78899999999999999999998888764
No 13
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=7.7e-33 Score=229.00 Aligned_cols=218 Identities=18% Similarity=0.234 Sum_probs=179.8
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
.+|+|+||++++++.++++|+++++++++++++.+.|+|+++....... +++++|+|.| +|++|++++|+|+.+|
T Consensus 128 ~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~----~~g~~VlV~G-~G~vG~~avq~Ak~~G 202 (375)
T PLN02178 128 NQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTK----ESGKRLGVNG-LGGLGHIAVKIGKAFG 202 (375)
T ss_pred CCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCC----CCCCEEEEEc-ccHHHHHHHHHHHHcC
Confidence 4799999999999999999999999999999999999999984443210 5899999998 7999999999999999
Q ss_pred CEEEEEeCc-c-cHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCchHH
Q 045248 92 THVTASCGA-R-NIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGPSAM 168 (240)
Q Consensus 92 ~~v~~~~~~-~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~ 168 (240)
++|+++++. + +.+.++++|+++++++.+. ....+.+ .++|++||++|.. .+..++++++++|+++.+|.... .
T Consensus 203 a~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~-~~v~~~~--~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~-~ 278 (375)
T PLN02178 203 LRVTVISRSSEKEREAIDRLGADSFLVTTDS-QKMKEAV--GTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK-P 278 (375)
T ss_pred CeEEEEeCChHHhHHHHHhCCCcEEEcCcCH-HHHHHhh--CCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC-C
Confidence 999888853 3 4788899999999886542 1222222 2699999999986 58899999999999999996532 2
Q ss_pred HHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 169 LTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 169 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
..++...+.++++++.+++. ...++++++++++++|++++.+ ++|+|+|+++||+.+.+++..||+|+.+
T Consensus 279 ~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 279 LDLPIFPLVLGRKMVGGSQI-GGMKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred CccCHHHHHhCCeEEEEeCc-cCHHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 33445556678888988764 5677899999999999998876 5799999999999999998889999864
No 14
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=2.3e-32 Score=224.70 Aligned_cols=231 Identities=18% Similarity=0.210 Sum_probs=182.4
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHH
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGH 81 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~ 81 (240)
|......+....|+|+||+.++++.++++|+++++++++++. .+.++++++ ....+ +++++|+|+| +|++|+
T Consensus 103 c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~-~~~~~-----~~g~~vlV~G-~g~vG~ 174 (347)
T PRK10309 103 CAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF-HLAQG-----CEGKNVIIIG-AGTIGL 174 (347)
T ss_pred CCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHH
Confidence 333333444568999999999999999999999999998873 234678876 56666 7899999998 799999
Q ss_pred HHHHHHHhCCCE-EEEEeC-cccHHHHHhcCCCEEEeCCCCc-cccccCCCCCccc-EEEeCCCCC-CccccccCCCCCc
Q 045248 82 YAVQLAKLGNTH-VTASCG-ARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYD-AVIHCATGI-PWSTFEPNLGTNG 156 (240)
Q Consensus 82 ~~~~~a~~~g~~-v~~~~~-~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d-~v~d~~g~~-~~~~~~~~l~~~G 156 (240)
+++|+|+.+|++ |+++++ +++.+.++++|++.++++.+.+ ....+.+.+.++| ++|||+|+. .+..++++++++|
T Consensus 175 ~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G 254 (347)
T PRK10309 175 LAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRA 254 (347)
T ss_pred HHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCC
Confidence 999999999995 677775 4788899999999999876544 2233445556898 999999975 5889999999999
Q ss_pred EEEEeCCCchH-HH-HHHHhhheeccceeeeEEEcC----CHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHH
Q 045248 157 KVIDITPGPSA-ML-TFALKKLTFSKKQLVPLLLIP----KRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESI 228 (240)
Q Consensus 157 ~iv~~g~~~~~-~~-~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~ 228 (240)
+++.+|..... .. ......+..++.++.+++... ..+.++++++++++|+++ ++++++|+|+|+++||+.+.
T Consensus 255 ~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~ 334 (347)
T PRK10309 255 QLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLA 334 (347)
T ss_pred EEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHh
Confidence 99999964322 11 112234567788898876421 247789999999999984 68899999999999999999
Q ss_pred cCCCcccEEEeC
Q 045248 229 DGHATGKIIVEP 240 (240)
Q Consensus 229 ~~~~~gkvvl~~ 240 (240)
++...||+|+++
T Consensus 335 ~~~~~gKvvv~~ 346 (347)
T PRK10309 335 GNPMPGKVLLQI 346 (347)
T ss_pred cCCcceEEEEeC
Confidence 988889999875
No 15
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.2e-33 Score=217.60 Aligned_cols=223 Identities=20% Similarity=0.203 Sum_probs=189.0
Q ss_pred ccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHH
Q 045248 9 VSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 88 (240)
Q Consensus 9 ~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~ 88 (240)
.+...++|+||.++++..++|++++.+++.++.+.|...|.+.+..+.+++ ++|++|.|.| .|++|++++|-|+
T Consensus 133 h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v-----~~G~tvaV~G-lGgVGlaaI~gA~ 206 (366)
T COG1062 133 HYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKV-----EPGDTVAVFG-LGGVGLAAIQGAK 206 (366)
T ss_pred eeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccC-----CCCCeEEEEe-ccHhHHHHHHHHH
Confidence 333346999999999999999999999999999999999999998899999 9999999999 9999999999999
Q ss_pred hCCC-EEEEEeC-cccHHHHHhcCCCEEEeCCCCc--cccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCC
Q 045248 89 LGNT-HVTASCG-ARNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 89 ~~g~-~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~ 163 (240)
..|+ ++++++. ++|+++++++|+++++|.++.. ...+....+.|+|++|||+|+ ..+++++.++.++|+.+.+|.
T Consensus 207 ~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv 286 (366)
T COG1062 207 AAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGV 286 (366)
T ss_pred HcCCceEEEEeCCHHHHHHHHhcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEec
Confidence 9999 9999995 5999999999999999988763 233444455699999999998 459999999999999999995
Q ss_pred Cch-HHHHHHHhhheeccceeeeEEEc--CCHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 164 GPS-AMLTFALKKLTFSKKQLVPLLLI--PKRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 164 ~~~-~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
.+. ...+...-++. .+++|+|+++. .-+.++++++++..+|++. ++++++++|+||||||+++.+++.+ |-|+
T Consensus 287 ~~~~~~i~~~~~~lv-~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi 364 (366)
T COG1062 287 AGAGQEISTRPFQLV-TGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVI 364 (366)
T ss_pred CCCCceeecChHHee-ccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEe
Confidence 432 23333333333 34899999873 3467899999999999976 6999999999999999999999977 5554
Q ss_pred e
Q 045248 239 E 239 (240)
Q Consensus 239 ~ 239 (240)
.
T Consensus 365 ~ 365 (366)
T COG1062 365 R 365 (366)
T ss_pred c
Confidence 4
No 16
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=7.9e-32 Score=220.81 Aligned_cols=222 Identities=26% Similarity=0.319 Sum_probs=181.1
Q ss_pred cccceEEEecC-CceeeCC-CCCChh-hhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhC
Q 045248 14 GGLAEFAVAKE-SSTVARP-SEVSAA-EGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLG 90 (240)
Q Consensus 14 G~~~e~~~v~~-~~~~~ip-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~ 90 (240)
|+|+||+++++ ..++++| ++++++ +++++++++.|||+++.+..++ ++|++|||+|++|++|++++|+|+.+
T Consensus 101 g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~-----~~g~~VlI~Ga~G~vG~~aiqlAk~~ 175 (338)
T cd08295 101 TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKP-----KKGETVFVSAASGAVGQLVGQLAKLK 175 (338)
T ss_pred CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCC-----CCCCEEEEecCccHHHHHHHHHHHHc
Confidence 68999999999 7999995 678887 7899999999999999777888 89999999998899999999999999
Q ss_pred CCEEEEEeC-cccHHHHHh-cCCCEEEeCCCC-c-cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCch
Q 045248 91 NTHVTASCG-ARNIEFVKS-LGADEVLDYKTP-D-GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 91 g~~v~~~~~-~~~~~~~~~-~g~~~v~~~~~~-~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
|++|+++++ +++.+.+++ +|+++++++.+. + ...+....+.++|+++|++|+..+..++++++++|+++.+|....
T Consensus 176 G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~ 255 (338)
T cd08295 176 GCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQ 255 (338)
T ss_pred CCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEeccccc
Confidence 999998886 478898988 999999986543 3 222332234689999999998778899999999999999985432
Q ss_pred HHH-----HHHHhhheeccceeeeEEEcCC----HHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEE
Q 045248 167 AML-----TFALKKLTFSKKQLVPLLLIPK----RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKII 237 (240)
Q Consensus 167 ~~~-----~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 237 (240)
... ..+...+.+++.++.+++.... .+.++++++++++|++++.+...|+++++++|++.+.+++..||+|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvV 335 (338)
T cd08295 256 YNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQV 335 (338)
T ss_pred CCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEE
Confidence 111 1123445567777877553211 3457889999999999987767799999999999999999899999
Q ss_pred EeC
Q 045248 238 VEP 240 (240)
Q Consensus 238 l~~ 240 (240)
+++
T Consensus 336 l~~ 338 (338)
T cd08295 336 VKV 338 (338)
T ss_pred EEC
Confidence 875
No 17
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=9.9e-32 Score=221.04 Aligned_cols=229 Identities=21% Similarity=0.268 Sum_probs=185.6
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCC------CCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcC
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPS------EVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAA 75 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~------~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~ 75 (240)
|.++...+...+|+|+||+.++++.++++|+ ++++++++++++.+.++|+++. ..++ +++++|+|+|+
T Consensus 102 c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~-----~~g~~VlV~G~ 175 (349)
T TIGR03201 102 CRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGL-----KKGDLVIVIGA 175 (349)
T ss_pred CCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCC-----CCCCEEEEECC
Confidence 4444444444579999999999999999999 8999999999999999999994 5667 89999999995
Q ss_pred CchHHHHHHHHHHhCCCEEEEEeC-cccHHHHHhcCCCEEEeCCCCc----cc-cccCCCCCccc----EEEeCCCCCC-
Q 045248 76 SGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEVLDYKTPD----GA-ALKSPSGRKYD----AVIHCATGIP- 144 (240)
Q Consensus 76 ~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~----~~-~~~~~~~~~~d----~v~d~~g~~~- 144 (240)
|++|++++|+|+.+|++|+++++ +++++.++++|++.++++.+.+ .. ..+.+.+.++| ++|||+|+..
T Consensus 176 -G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~ 254 (349)
T TIGR03201 176 -GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPG 254 (349)
T ss_pred -CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHH
Confidence 99999999999999999998885 4889999999999998876542 11 22345566776 8999999855
Q ss_pred ccccccCCCCCcEEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHH
Q 045248 145 WSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAED 222 (240)
Q Consensus 145 ~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~ 222 (240)
+..++++++++|+++.+|..... ..+....+..++.++.+.+. ...++++++++++++|++++ +++ +|+|+++++
T Consensus 255 ~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~ 331 (349)
T TIGR03201 255 QESALSLLSHGGTLVVVGYTMAK-TEYRLSNLMAFHARALGNWG-CPPDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEH 331 (349)
T ss_pred HHHHHHHHhcCCeEEEECcCCCC-cccCHHHHhhcccEEEEEec-CCHHHHHHHHHHHHcCCCCcccceE-EecHHHHHH
Confidence 77889999999999999965432 23333445556778888764 46678999999999999864 454 799999999
Q ss_pred HHHHHHcCCCcccEEEeC
Q 045248 223 AWAESIDGHATGKIIVEP 240 (240)
Q Consensus 223 a~~~~~~~~~~gkvvl~~ 240 (240)
||+.+.+++..||+++++
T Consensus 332 A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 332 VFAAAHHHKLKRRAILTP 349 (349)
T ss_pred HHHHHHcCCccceEEecC
Confidence 999999999889999864
No 18
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=7.2e-32 Score=222.60 Aligned_cols=220 Identities=19% Similarity=0.219 Sum_probs=183.2
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|+||+.+++..++++|+++++++++++++.+.++|+++.+..++ +++++|||+| +|++|++++|+|+.+|+
T Consensus 128 ~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~-----~~g~~VlV~G-~g~vG~~a~~~ak~~G~ 201 (358)
T TIGR03451 128 IGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGV-----KRGDSVAVIG-CGGVGDAAIAGAALAGA 201 (358)
T ss_pred cccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 69999999999999999999999999999998888999888677777 8999999998 79999999999999999
Q ss_pred -EEEEEeC-cccHHHHHhcCCCEEEeCCCCc-cc-cccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCch-
Q 045248 93 -HVTASCG-ARNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGPS- 166 (240)
Q Consensus 93 -~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~- 166 (240)
+|+++++ +++++.++++|++.++++.+.+ .. ..+.+.+.++|++||++|++ .+..++++++++|+++.+|....
T Consensus 202 ~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~ 281 (358)
T TIGR03451 202 SKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD 281 (358)
T ss_pred CeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC
Confidence 5888886 4889999999999999876654 22 33445667899999999974 58899999999999999996532
Q ss_pred HHHHHHHhhheeccceeeeEEEc--CCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 167 AMLTFALKKLTFSKKQLVPLLLI--PKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
....++...+..++.++.+++.. ...+.++++++++++|++++ +++++|+++|+++||+.+.+++.. |+++.
T Consensus 282 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 282 MTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred ceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 12233444556677888887542 24678999999999999864 688999999999999999988765 77765
No 19
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.98 E-value=1.6e-31 Score=217.84 Aligned_cols=221 Identities=22% Similarity=0.301 Sum_probs=181.8
Q ss_pred cccceEEEecCCceeeC----CCCCChhhh-hhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHH
Q 045248 14 GGLAEFAVAKESSTVAR----PSEVSAAEG-SGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 88 (240)
Q Consensus 14 G~~~e~~~v~~~~~~~i----p~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~ 88 (240)
++|++|+.++.+.+.++ |++++++++ +++++.+.|||+++.+..++ ++|++|||+|++|++|++++|+|+
T Consensus 86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~-----~~g~~VLI~ga~g~vG~~aiqlAk 160 (325)
T TIGR02825 86 PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGV-----KGGETVMVNAAAGAVGSVVGQIAK 160 (325)
T ss_pred cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCC-----CCCCEEEEeCCccHHHHHHHHHHH
Confidence 47999999999988777 899999997 67889999999999888888 899999999999999999999999
Q ss_pred hCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCC-c-cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCc
Q 045248 89 LGNTHVTASCGA-RNIEFVKSLGADEVLDYKTP-D-GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 89 ~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~-~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~ 165 (240)
.+|++|++++++ ++.+.++++|++.++++.+. . ...+....++++|++||++|++.+..++++++++|+++.+|...
T Consensus 161 ~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~ 240 (325)
T TIGR02825 161 LKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 240 (325)
T ss_pred HcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchh
Confidence 999999988864 78999999999999988764 2 22333344568999999999888889999999999999998542
Q ss_pred h------HHHHHHHhhheeccceeeeEEEcC-----CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcc
Q 045248 166 S------AMLTFALKKLTFSKKQLVPLLLIP-----KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATG 234 (240)
Q Consensus 166 ~------~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~g 234 (240)
. .........+.+++.++.++.... ..+.++++++++++|++++.+...|+++++++|++.+.+++..|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~g 320 (325)
T TIGR02825 241 TYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLG 320 (325)
T ss_pred hcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCC
Confidence 1 111112334566777777765311 24578899999999999987767899999999999999999899
Q ss_pred cEEEe
Q 045248 235 KIIVE 239 (240)
Q Consensus 235 kvvl~ 239 (240)
|+|++
T Consensus 321 kvVv~ 325 (325)
T TIGR02825 321 KTIVK 325 (325)
T ss_pred eEEeC
Confidence 99974
No 20
>PLN02827 Alcohol dehydrogenase-like
Probab=99.98 E-value=2e-31 Score=221.09 Aligned_cols=219 Identities=15% Similarity=0.145 Sum_probs=180.2
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
+|+|+||+.+++..++++|+++++++++++++++.++|+++.+..++ ++|++|||+| +|++|++++|+|+.+|+
T Consensus 145 ~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~-----~~g~~VlV~G-~G~vG~~~iqlak~~G~ 218 (378)
T PLN02827 145 VSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADV-----SKGSSVVIFG-LGTVGLSVAQGAKLRGA 218 (378)
T ss_pred cccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 48999999999999999999999999999988888999877666777 8999999999 79999999999999999
Q ss_pred -EEEEEeC-cccHHHHHhcCCCEEEeCCCC--c-cccc-cCCCCCcccEEEeCCCCC-CccccccCCCCC-cEEEEeCCC
Q 045248 93 -HVTASCG-ARNIEFVKSLGADEVLDYKTP--D-GAAL-KSPSGRKYDAVIHCATGI-PWSTFEPNLGTN-GKVIDITPG 164 (240)
Q Consensus 93 -~v~~~~~-~~~~~~~~~~g~~~v~~~~~~--~-~~~~-~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~g~~ 164 (240)
+|+++++ +++.+.++++|++.++++.+. + ...+ +.+.+ ++|++||++|.. .+..+++.++++ |+++.+|..
T Consensus 219 ~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~ 297 (378)
T PLN02827 219 SQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVP 297 (378)
T ss_pred CeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCc
Confidence 5777774 588999999999999987652 2 2222 33343 899999999985 588999999998 999999975
Q ss_pred chHHHHHHH-hhheeccceeeeEEEc--CCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 165 PSAMLTFAL-KKLTFSKKQLVPLLLI--PKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 165 ~~~~~~~~~-~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
... ..+.. ..+.+++.++.+++.. ....+++++++++++|++++ +++++|+|+++++||+.+.+++. +|+||+
T Consensus 298 ~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~ 375 (378)
T PLN02827 298 KAK-PEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIH 375 (378)
T ss_pred CCC-ccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEE
Confidence 432 22222 2456788899887642 23567899999999999987 88999999999999999998876 588886
Q ss_pred C
Q 045248 240 P 240 (240)
Q Consensus 240 ~ 240 (240)
+
T Consensus 376 ~ 376 (378)
T PLN02827 376 M 376 (378)
T ss_pred e
Confidence 4
No 21
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.98 E-value=6.2e-32 Score=207.48 Aligned_cols=231 Identities=16% Similarity=0.138 Sum_probs=193.4
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHH
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGH 81 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~ 81 (240)
|.+..++.+....+|+||.++++..+.+|+++.+++.++.+.+...|+|.+.-+.+.+ ++|+++.|+| .|++|+
T Consensus 133 ~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv-----~~GstvAVfG-LG~VGL 206 (375)
T KOG0022|consen 133 CKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKV-----EPGSTVAVFG-LGGVGL 206 (375)
T ss_pred eCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhccc-----CCCCEEEEEe-cchHHH
Confidence 3344444444456999999999999999999999999999999999999999899999 9999999999 999999
Q ss_pred HHHHHHHhCCC-EEEEEe-CcccHHHHHhcCCCEEEeCCCCcc---ccccCCCCCcccEEEeCCCCC-CccccccCCCCC
Q 045248 82 YAVQLAKLGNT-HVTASC-GARNIEFVKSLGADEVLDYKTPDG---AALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTN 155 (240)
Q Consensus 82 ~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~ 155 (240)
++++-|++.|+ ++|+++ ++++.+.++++|+++.+|+.+... ..+.+..+.|+|+-|||+|+. .+++++.+.+.+
T Consensus 207 av~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~G 286 (375)
T KOG0022|consen 207 AVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKG 286 (375)
T ss_pred HHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcC
Confidence 99999999999 999999 569999999999999999874332 223445558999999999984 499999999999
Q ss_pred -cEEEEeCCCchHHHHHHHhhheeccceeeeEEE--cCCHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHcC
Q 045248 156 -GKVIDITPGPSAMLTFALKKLTFSKKQLVPLLL--IPKRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESIDG 230 (240)
Q Consensus 156 -G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~~ 230 (240)
|+-+.+|...........+...+.++++.|+.+ ...+++++.+++...+++++ ..|||.+||++|++||+++.+|
T Consensus 287 wG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~G 366 (375)
T KOG0022|consen 287 WGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEG 366 (375)
T ss_pred CCeEEEEEecCCCcccccchhhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCC
Confidence 999999965443322223333456778888877 35788999999999999865 7999999999999999999999
Q ss_pred CCcccEEEe
Q 045248 231 HATGKIIVE 239 (240)
Q Consensus 231 ~~~gkvvl~ 239 (240)
+.. |-|+.
T Consensus 367 ksi-R~vl~ 374 (375)
T KOG0022|consen 367 KSI-RCVLW 374 (375)
T ss_pred ceE-EEEEe
Confidence 976 66664
No 22
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.97 E-value=6.2e-31 Score=214.35 Aligned_cols=218 Identities=24% Similarity=0.238 Sum_probs=176.4
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEE-cCCchHHHHHHHHHHhCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVT-AASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~-G~~g~vG~~~~~~a~~~g 91 (240)
+|+|+||++++++.++++|+++++++++++++.+.|||.++ ..... ++++++|+ |++|++|++++|+|+.+|
T Consensus 96 ~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~------~~~~vlv~~~g~g~vG~~a~q~a~~~G 168 (324)
T cd08291 96 YGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE------EGAKAVVHTAAASALGRMLVRLCKADG 168 (324)
T ss_pred CCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc------CCCcEEEEccCccHHHHHHHHHHHHcC
Confidence 39999999999999999999999999998888888998655 55544 45556665 779999999999999999
Q ss_pred CEEEEEeCc-ccHHHHHhcCCCEEEeCCCCcc-c-cccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHH
Q 045248 92 THVTASCGA-RNIEFVKSLGADEVLDYKTPDG-A-ALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAM 168 (240)
Q Consensus 92 ~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~-~-~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~ 168 (240)
++|++++++ ++.+.++++|+++++++...+. . ..+.+.+.++|++||++|+......+++++++|+++.+|......
T Consensus 169 ~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~ 248 (324)
T cd08291 169 IKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKL 248 (324)
T ss_pred CEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCCC
Confidence 999988864 7899999999999998776552 2 234455678999999999887788899999999999998543221
Q ss_pred H-HHHHhhheeccceeeeEEEc-----CCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 169 L-TFALKKLTFSKKQLVPLLLI-----PKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 169 ~-~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
. .++...+..++.++.+++.. ...+.+++++++++ +.+++.++++|+|+|+++||+.+.++...||+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~ 323 (324)
T cd08291 249 DEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLL 323 (324)
T ss_pred cccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEe
Confidence 1 12233445677777776542 13567889999998 9999999999999999999999999988999987
No 23
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=99.97 E-value=8.8e-31 Score=215.88 Aligned_cols=217 Identities=21% Similarity=0.267 Sum_probs=179.2
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
.+|+|+||+++++..++++|+++++++++++++.+.|||+++...... ++|++++|+| +|++|++++|+|+.+|
T Consensus 131 ~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~-----~~g~~vlV~G-~G~vG~~av~~Ak~~G 204 (357)
T PLN02514 131 TQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLK-----QSGLRGGILG-LGGVGHMGVKIAKAMG 204 (357)
T ss_pred CCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccC-----CCCCeEEEEc-ccHHHHHHHHHHHHCC
Confidence 479999999999999999999999999999999999999999665555 6899999997 7999999999999999
Q ss_pred CEEEEEeCc-ccHH-HHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCchHH
Q 045248 92 THVTASCGA-RNIE-FVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPSAM 168 (240)
Q Consensus 92 ~~v~~~~~~-~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~ 168 (240)
++|+++++. ++++ .++++|++.++++.+.. ...+.+ .++|++||++|. ..+..++++++++|+++.+|.... .
T Consensus 205 ~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~-~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~ 280 (357)
T PLN02514 205 HHVTVISSSDKKREEALEHLGADDYLVSSDAA-EMQEAA--DSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT-P 280 (357)
T ss_pred CeEEEEeCCHHHHHHHHHhcCCcEEecCCChH-HHHHhc--CCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC-C
Confidence 998888754 4544 44679998877654421 112222 369999999996 468899999999999999996532 2
Q ss_pred HHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 169 LTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 169 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
..+....+.+++.++.+++. ....+++++++++++|++++.+ ++|+++|+.+||+.+.+++..||+|+.+
T Consensus 281 ~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 281 LQFVTPMLMLGRKVITGSFI-GSMKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDV 350 (357)
T ss_pred CcccHHHHhhCCcEEEEEec-CCHHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEc
Confidence 33445566678889999874 5677899999999999998776 5899999999999999999889999864
No 24
>PLN02740 Alcohol dehydrogenase-like
Probab=99.97 E-value=6.6e-31 Score=218.44 Aligned_cols=219 Identities=17% Similarity=0.202 Sum_probs=178.2
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
+|+|+||++++++.++++|+++++++++++++.+.|||+++.+..++ ++|++|||+| +|++|++++|+|+.+|+
T Consensus 150 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~-----~~g~~VlV~G-~G~vG~~a~q~ak~~G~ 223 (381)
T PLN02740 150 TSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANV-----QAGSSVAIFG-LGAVGLAVAEGARARGA 223 (381)
T ss_pred CccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHCCC
Confidence 69999999999999999999999999999999899999988777888 8999999999 79999999999999999
Q ss_pred -EEEEEeC-cccHHHHHhcCCCEEEeCCCCc---cccc-cCCCCCcccEEEeCCCCC-CccccccCCCCC-cEEEEeCCC
Q 045248 93 -HVTASCG-ARNIEFVKSLGADEVLDYKTPD---GAAL-KSPSGRKYDAVIHCATGI-PWSTFEPNLGTN-GKVIDITPG 164 (240)
Q Consensus 93 -~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~---~~~~-~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~g~~ 164 (240)
+|+++++ +++++.++++|++.++++.+.+ ...+ +.+.+ ++|++||++|+. .+..++++++++ |+++.+|..
T Consensus 224 ~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~ 302 (381)
T PLN02740 224 SKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIH 302 (381)
T ss_pred CcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccC
Confidence 6998886 4899999999999999876532 1222 33344 899999999974 588999999997 999999965
Q ss_pred chH-HHHHHHhhheeccceeeeEEEc--CCHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 165 PSA-MLTFALKKLTFSKKQLVPLLLI--PKRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 165 ~~~-~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
... ...+.... .+++.++.+++.. .....++++++++.+++++ ++++++|+|+|+++||+.+.+++. .|++|+
T Consensus 303 ~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~ 380 (381)
T PLN02740 303 PTPKMLPLHPME-LFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLH 380 (381)
T ss_pred CCCceecccHHH-HhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEe
Confidence 432 11222111 2357788887642 2246789999999999876 478899999999999999988875 499886
Q ss_pred C
Q 045248 240 P 240 (240)
Q Consensus 240 ~ 240 (240)
+
T Consensus 381 ~ 381 (381)
T PLN02740 381 L 381 (381)
T ss_pred C
Confidence 4
No 25
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.97 E-value=9.3e-31 Score=216.59 Aligned_cols=219 Identities=17% Similarity=0.197 Sum_probs=175.2
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|+||+++++..++++|+++++++++++++++.|||+++.+..++ ++|++|||+| +|++|++++|+|+.+|+
T Consensus 137 ~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~-----~~g~~VlV~G-~G~iG~~a~q~Ak~~G~ 210 (368)
T TIGR02818 137 CSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKV-----EEGDTVAVFG-LGGIGLSVIQGARMAKA 210 (368)
T ss_pred CccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 47999999999999999999999999999999999999998777888 8999999998 79999999999999999
Q ss_pred -EEEEEeC-cccHHHHHhcCCCEEEeCCCCc---cccc-cCCCCCcccEEEeCCCCC-CccccccCCCCC-cEEEEeCCC
Q 045248 93 -HVTASCG-ARNIEFVKSLGADEVLDYKTPD---GAAL-KSPSGRKYDAVIHCATGI-PWSTFEPNLGTN-GKVIDITPG 164 (240)
Q Consensus 93 -~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~---~~~~-~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~g~~ 164 (240)
+|+++++ +++++.++++|++.++++.+.+ ...+ +.+.+ ++|++||++|++ .+..++++++++ |+++.+|..
T Consensus 211 ~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~ 289 (368)
T TIGR02818 211 SRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVA 289 (368)
T ss_pred CeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEecc
Confidence 8999885 5899999999999999876422 1222 33343 899999999974 488899999886 999999964
Q ss_pred ch-HHHHHHHhhheeccceeeeEEEc--CCHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 165 PS-AMLTFALKKLTFSKKQLVPLLLI--PKRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 165 ~~-~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
.. .........+. .+..+.+++.. ..+..++++++++++++++ ++++++|+|+|+++||+.+.+++. .|++++
T Consensus 290 ~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~ 367 (368)
T TIGR02818 290 GAGQEISTRPFQLV-TGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIH 367 (368)
T ss_pred CCCCcccccHHHHh-ccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEee
Confidence 31 12222222222 23345665432 2356799999999999875 578999999999999999988764 699886
Q ss_pred C
Q 045248 240 P 240 (240)
Q Consensus 240 ~ 240 (240)
+
T Consensus 368 ~ 368 (368)
T TIGR02818 368 Y 368 (368)
T ss_pred C
Confidence 4
No 26
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.97 E-value=1.3e-30 Score=212.78 Aligned_cols=222 Identities=24% Similarity=0.307 Sum_probs=180.2
Q ss_pred cccceEEEecCC---ceeeCCCCCC--h---hhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHH
Q 045248 14 GGLAEFAVAKES---STVARPSEVS--A---AEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQ 85 (240)
Q Consensus 14 G~~~e~~~v~~~---~~~~ip~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~ 85 (240)
++|++|+.++++ .++++|++++ + ..++++++.+.|||+++....++ ++|++|||+|++|++|++++|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~-----~~g~~vlI~ga~g~vG~~aiq 162 (329)
T cd08294 88 FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKP-----KAGETVVVNGAAGAVGSLVGQ 162 (329)
T ss_pred CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCC-----CCCCEEEEecCccHHHHHHHH
Confidence 589999999999 9999999998 2 33346788899999999888888 899999999999999999999
Q ss_pred HHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCC
Q 045248 86 LAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 86 ~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~ 163 (240)
+|+.+|++|++++++ ++.+.++++|+++++++.+.+ ...+....+.++|++||++|++.+..++++++++|+++.+|.
T Consensus 163 lA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~ 242 (329)
T cd08294 163 IAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGS 242 (329)
T ss_pred HHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcc
Confidence 999999999998864 889999999999999987665 223333334789999999999778999999999999999884
Q ss_pred CchH----H--HHHHHhhheeccceeeeEEEcC----CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCc
Q 045248 164 GPSA----M--LTFALKKLTFSKKQLVPLLLIP----KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHAT 233 (240)
Q Consensus 164 ~~~~----~--~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~ 233 (240)
.... . .......+.+++.++.+++... ..+.++++++++++|++++.+...++++++++|++.+.+++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~ 322 (329)
T cd08294 243 ISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENT 322 (329)
T ss_pred hhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCC
Confidence 3210 0 1122334566777887765321 1345778999999999987666779999999999999999989
Q ss_pred ccEEEeC
Q 045248 234 GKIIVEP 240 (240)
Q Consensus 234 gkvvl~~ 240 (240)
||+|+++
T Consensus 323 gkvvv~~ 329 (329)
T cd08294 323 GKAIVKV 329 (329)
T ss_pred CeEEEeC
Confidence 9999874
No 27
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.97 E-value=1.4e-30 Score=215.50 Aligned_cols=218 Identities=16% Similarity=0.156 Sum_probs=176.5
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|+||+.++++.++++|+++++++++++++++.|||+++.+..++ ++|++|+|+| +|++|++++|+|+.+|+
T Consensus 136 ~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~-----~~g~~vlV~G-~g~vG~~~~~~a~~~G~ 209 (365)
T cd08277 136 TSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKV-----EPGSTVAVFG-LGAVGLSAIMGAKIAGA 209 (365)
T ss_pred cccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 58999999999999999999999999999999999999998777778 8999999998 79999999999999999
Q ss_pred -EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc---cccc-cCCCCCcccEEEeCCCC-CCccccccCCCCC-cEEEEeCCC
Q 045248 93 -HVTASCGA-RNIEFVKSLGADEVLDYKTPD---GAAL-KSPSGRKYDAVIHCATG-IPWSTFEPNLGTN-GKVIDITPG 164 (240)
Q Consensus 93 -~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~---~~~~-~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~g~~ 164 (240)
+|+++++. ++++.++++|++++++..+.+ ...+ +.+. .++|++||++|+ ..+..++++++++ |+++.+|..
T Consensus 210 ~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (365)
T cd08277 210 SRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVP 288 (365)
T ss_pred CeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCC
Confidence 79988864 789999999999998866532 1222 2333 689999999996 4478899999885 999999865
Q ss_pred chHHHHHHHhhheeccceeeeEEEc--CCHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 165 PSAMLTFALKKLTFSKKQLVPLLLI--PKRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
.....++....+.. +.++.+++.. .....++++++++++++++ ++++++|+++|+++||+.+.+++ ..|++++
T Consensus 289 ~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 289 PGAELSIRPFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred CccccccCHhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEeeC
Confidence 42222222323332 6778777642 2356789999999999755 67889999999999999998887 4688874
No 28
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.97 E-value=2.6e-30 Score=214.02 Aligned_cols=218 Identities=19% Similarity=0.197 Sum_probs=174.7
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|+||+.++++.++++|+++++++++++++.+.|+|+++.+..++ +++++|||+| +|++|++++|+|+.+|+
T Consensus 138 ~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~-----~~g~~VlV~G-~G~vG~~a~~~ak~~G~ 211 (368)
T cd08300 138 TSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKV-----EPGSTVAVFG-LGAVGLAVIQGAKAAGA 211 (368)
T ss_pred cccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 47999999999999999999999999999998989999998777778 8999999998 79999999999999999
Q ss_pred -EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc---cccc-cCCCCCcccEEEeCCCCC-CccccccCCCCC-cEEEEeCCC
Q 045248 93 -HVTASCGA-RNIEFVKSLGADEVLDYKTPD---GAAL-KSPSGRKYDAVIHCATGI-PWSTFEPNLGTN-GKVIDITPG 164 (240)
Q Consensus 93 -~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~---~~~~-~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~g~~ 164 (240)
+|++++++ ++++.++++|++.++++.+.+ ...+ +.+. .++|++||++|+. .+..++++++++ |+++.+|..
T Consensus 212 ~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~-~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~ 290 (368)
T cd08300 212 SRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTD-GGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVA 290 (368)
T ss_pred CeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhC-CCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccC
Confidence 79998864 889999999999999876532 1222 3344 3899999999974 588899999887 999999865
Q ss_pred ch-HHHHHHHhhheeccceeeeEEE--cCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 165 PS-AMLTFALKKLTFSKKQLVPLLL--IPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 165 ~~-~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
.. .........+. ...++.++.. ....+++++++++++++++++ +++++|+|+|+++||+.+.+++. .|++++
T Consensus 291 ~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 291 AAGQEISTRPFQLV-TGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred CCCCccccCHHHHh-hcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 32 11111121122 2335555443 235678999999999999874 68899999999999999988774 588874
No 29
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.97 E-value=2.7e-30 Score=212.76 Aligned_cols=217 Identities=25% Similarity=0.347 Sum_probs=181.6
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
+|+|+||+.++++.++++|+++++++++++ ..+.|||+++ ...++ +++++|+|+| +|++|++++|+|+.+|+
T Consensus 126 ~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~-----~~g~~vlI~g-~g~vG~~a~q~a~~~G~ 197 (351)
T cd08233 126 GGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGF-----KPGDTALVLG-AGPIGLLTILALKAAGA 197 (351)
T ss_pred CCceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 699999999999999999999999998776 5667999999 77777 8999999998 69999999999999999
Q ss_pred -EEEEEeC-cccHHHHHhcCCCEEEeCCCCcc-c-cccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCchH
Q 045248 93 -HVTASCG-ARNIEFVKSLGADEVLDYKTPDG-A-ALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPSA 167 (240)
Q Consensus 93 -~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~-~-~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~ 167 (240)
+|+++++ +++.+.++++|++.++++.+.+. . ..+.+.+.++|++||++|+ ..+..++++++++|+++.+|... .
T Consensus 198 ~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~ 276 (351)
T cd08233 198 SKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE-K 276 (351)
T ss_pred CEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC-C
Confidence 8888885 47888889999999998776552 2 2344556679999999986 45888999999999999999754 2
Q ss_pred HHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceE--EecCceecchhH-HHHHHHHHcCCCc-ccEEEe
Q 045248 168 MLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLK--TVINSKHPLSKA-EDAWAESIDGHAT-GKIIVE 239 (240)
Q Consensus 168 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~-~~a~~~~~~~~~~-gkvvl~ 239 (240)
..+++...+..++.++.+.+. ...+.++++++++++++++ +.++++|+++|+ ++||+.+.+++.. +|+|+.
T Consensus 277 ~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 277 PISFNPNDLVLKEKTLTGSIC-YTREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred CCccCHHHHHhhCcEEEEEec-cCcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 334455566678888988764 4567899999999999995 567889999996 7899999998874 899873
No 30
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.97 E-value=2.5e-30 Score=211.96 Aligned_cols=220 Identities=14% Similarity=0.151 Sum_probs=167.8
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhh--hCCCcCCCCCCCeEEEEcCCchH
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQS--AGVKLDGSGQQKNILVTAASGGV 79 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~~~g~~vlV~G~~g~v 79 (240)
|.+..+.+...+|+|+||+++++++++++|+++++++++++. .+.++|+++... ..+ ++|++|+|.| +|++
T Consensus 103 c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~-----~~g~~VlV~G-~G~v 175 (341)
T cd08237 103 LPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAISRFEQIAH-----KDRNVIGVWG-DGNL 175 (341)
T ss_pred CCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHHHHhhcCC-----CCCCEEEEEC-CCHH
Confidence 333333444457999999999999999999999999877554 566889988543 344 7899999999 7999
Q ss_pred HHHHHHHHHh-CCC-EEEEEeC-cccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC----CccccccCC
Q 045248 80 GHYAVQLAKL-GNT-HVTASCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI----PWSTFEPNL 152 (240)
Q Consensus 80 G~~~~~~a~~-~g~-~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~----~~~~~~~~l 152 (240)
|++++|+++. +|. +|+++++ ++|++.+++++++..++. .....++|+|||++|+. .+..+++++
T Consensus 176 Gl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~---------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l 246 (341)
T cd08237 176 GYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD---------IPEDLAVDHAFECVGGRGSQSAINQIIDYI 246 (341)
T ss_pred HHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh---------hhhccCCcEEEECCCCCccHHHHHHHHHhC
Confidence 9999999996 665 8988886 478888888776533321 01123699999999953 388899999
Q ss_pred CCCcEEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCC-----ceEEecCceecc---hhHHHHH
Q 045248 153 GTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEG-----KLKTVINSKHPL---SKAEDAW 224 (240)
Q Consensus 153 ~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~---~~~~~a~ 224 (240)
+++|+++.+|.... ..+++...+..+++++.++.. ...+++++++++++++ +++++++++|++ +++++++
T Consensus 247 ~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~ 324 (341)
T cd08237 247 RPQGTIGLMGVSEY-PVPINTRMVLEKGLTLVGSSR-STREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAF 324 (341)
T ss_pred cCCcEEEEEeecCC-CcccCHHHHhhCceEEEEecc-cCHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHH
Confidence 99999999996432 233445556788889998764 4567899999999999 567789999998 4667777
Q ss_pred HHHHcCCCcccEEEeC
Q 045248 225 AESIDGHATGKIIVEP 240 (240)
Q Consensus 225 ~~~~~~~~~gkvvl~~ 240 (240)
+...++ ..||+|+++
T Consensus 325 ~~~~~~-~~gKvvi~~ 339 (341)
T cd08237 325 ESDLTN-SWGKTVMEW 339 (341)
T ss_pred HHHhhc-CcceEEEEe
Confidence 666655 678999864
No 31
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.97 E-value=9.4e-31 Score=208.95 Aligned_cols=201 Identities=17% Similarity=0.187 Sum_probs=164.1
Q ss_pred CCcccceEEEecCC-ceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhC
Q 045248 12 NGGGLAEFAVAKES-STVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLG 90 (240)
Q Consensus 12 ~~G~~~e~~~v~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~ 90 (240)
.+|+|+||++++++ .++++|+++++++++++++.+.|+|+++ ..... .++++|||+| +|++|++++|+|+.+
T Consensus 71 ~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~-----~~g~~VlV~G-~G~vG~~~~~~ak~~ 143 (280)
T TIGR03366 71 LSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGD-----LKGRRVLVVG-AGMLGLTAAAAAAAA 143 (280)
T ss_pred ccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccC-----CCCCEEEEEC-CCHHHHHHHHHHHHc
Confidence 47999999999997 7999999999999999999999999998 44555 6899999998 699999999999999
Q ss_pred CCE-EEEEeC-cccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCc-h
Q 045248 91 NTH-VTASCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGP-S 166 (240)
Q Consensus 91 g~~-v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~-~ 166 (240)
|++ |+++++ ++|++.++++|++.+++..+......+.+.+.++|++||++|.+ .+..++++++++|+++.+|... .
T Consensus 144 G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~ 223 (280)
T TIGR03366 144 GAARVVAADPSPDRRELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG 223 (280)
T ss_pred CCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC
Confidence 995 888875 47899999999999887654322223344567899999999975 4889999999999999999642 2
Q ss_pred HHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCC--ceE--EecCceecchhH
Q 045248 167 AMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEG--KLK--TVINSKHPLSKA 220 (240)
Q Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~i~--~~~~~~~~~~~~ 220 (240)
...+++...+..+++++.+++. ...++++++++++.++ ++. ++++++|+++|+
T Consensus 224 ~~~~i~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 224 GPVALDPEQVVRRWLTIRGVHN-YEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CceeeCHHHHHhCCcEEEecCC-CCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 2334556677788999999763 5678899999999985 333 578999999874
No 32
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.97 E-value=5.4e-30 Score=213.98 Aligned_cols=222 Identities=23% Similarity=0.306 Sum_probs=183.3
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhh--hCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHh
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQS--AGVKLDGSGQQKNILVTAASGGVGHYAVQLAKL 89 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~ 89 (240)
.+|+|++|+.+++..++++|+++++++++.++..+.|||+++... .++ +++++|+|+|++|++|++++++|+.
T Consensus 142 ~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~-----~~g~~vlV~ga~g~iG~a~~~lak~ 216 (393)
T cd08246 142 NYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTV-----KPGDNVLIWGASGGLGSMAIQLARA 216 (393)
T ss_pred CCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccC-----CCCCEEEEECCCcHHHHHHHHHHHH
Confidence 469999999999999999999999999999999999999998544 566 7899999999889999999999999
Q ss_pred CCCEEEEEeC-cccHHHHHhcCCCEEEeCCCCc-----------------------cc-cccCCCCC-cccEEEeCCCCC
Q 045248 90 GNTHVTASCG-ARNIEFVKSLGADEVLDYKTPD-----------------------GA-ALKSPSGR-KYDAVIHCATGI 143 (240)
Q Consensus 90 ~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~-----------------------~~-~~~~~~~~-~~d~v~d~~g~~ 143 (240)
+|++++++++ +++.+.++++|++.++++++.+ .. ..+.+.+. ++|+++|++|+.
T Consensus 217 ~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~ 296 (393)
T cd08246 217 AGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA 296 (393)
T ss_pred cCCeEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH
Confidence 9998888776 4889999999999999864421 01 12334555 899999999987
Q ss_pred CccccccCCCCCcEEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHH
Q 045248 144 PWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDA 223 (240)
Q Consensus 144 ~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 223 (240)
.+..++++++++|+++.+|.............+..++.++.+.+. ...+.+.+++++++++.+.+.++++|+++++++|
T Consensus 297 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a 375 (393)
T cd08246 297 TFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHF-ANDREAAEANRLVMKGRIDPCLSKVFSLDETPDA 375 (393)
T ss_pred hHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhheeEEEeccc-CcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHH
Confidence 788999999999999999854322222334445567777777653 4667899999999999998878889999999999
Q ss_pred HHHHHcC-CCcccEEEe
Q 045248 224 WAESIDG-HATGKIIVE 239 (240)
Q Consensus 224 ~~~~~~~-~~~gkvvl~ 239 (240)
++.+.++ ...||+|+-
T Consensus 376 ~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 376 HQLMHRNQHHVGNMAVL 392 (393)
T ss_pred HHHHHhCccccceEEEe
Confidence 9999988 788999874
No 33
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.97 E-value=2.7e-30 Score=211.54 Aligned_cols=222 Identities=24% Similarity=0.318 Sum_probs=175.6
Q ss_pred CCcccceEEEecCCceeeC-CCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhC
Q 045248 12 NGGGLAEFAVAKESSTVAR-PSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLG 90 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~i-p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~ 90 (240)
.+|+|+||+.+|.++++++ |+++ ..+.+++...+.+++++....... .++.+|+|+| +|++|++++++++.+
T Consensus 119 ~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~-----~~~~~V~V~G-aGpIGLla~~~a~~~ 191 (350)
T COG1063 119 IDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAV-----RPGGTVVVVG-AGPIGLLAIALAKLL 191 (350)
T ss_pred CCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHc
Confidence 5799999999998666665 7888 566666655667997775455544 4556999999 999999999999999
Q ss_pred CC-EEEEEeC-cccHHHHHh-cCCCEEEeCCCCc--cccccCCCCCcccEEEeCCCCCC-ccccccCCCCCcEEEEeCCC
Q 045248 91 NT-HVTASCG-ARNIEFVKS-LGADEVLDYKTPD--GAALKSPSGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 91 g~-~v~~~~~-~~~~~~~~~-~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~ 164 (240)
|+ +|++++. ++|++.+++ .|++.+++....+ ....+.+.+.++|++|||+|... +.++++.++++|+++.+|..
T Consensus 192 Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~ 271 (350)
T COG1063 192 GASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVY 271 (350)
T ss_pred CCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEecc
Confidence 98 8888875 589999998 6666665544433 23346677789999999999754 88999999999999999976
Q ss_pred chHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCC-cccEEEeC
Q 045248 165 PSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHA-TGKIIVEP 240 (240)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~-~gkvvl~~ 240 (240)
......++...+..+++++.+++.......++.+++++++|++.+ ++++.++++++++||+.+.+++. .-|+++.+
T Consensus 272 ~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 272 GGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 543224556678889999999854356678999999999999874 66889999999999999998654 45888864
No 34
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=8.4e-30 Score=209.74 Aligned_cols=222 Identities=32% Similarity=0.432 Sum_probs=185.7
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
.+|+|++|+.+++..++++|+++++.+++++++.+.|||+++ ...++ .+++++||+|++|++|++++++|+.+|
T Consensus 129 ~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~-----~~g~~vlI~g~~g~ig~~~~~~a~~~g 202 (350)
T cd08274 129 RDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGV-----GAGETVLVTGASGGVGSALVQLAKRRG 202 (350)
T ss_pred CCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCC-----CCCCEEEEEcCCcHHHHHHHHHHHhcC
Confidence 369999999999999999999999999999999999999998 77777 899999999988999999999999999
Q ss_pred CEEEEEeCcccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHHHHH
Q 045248 92 THVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAMLTF 171 (240)
Q Consensus 92 ~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~ 171 (240)
+++++++++++.+.++++|++.+++...........+.+.++|++||++|+..+..++++++++|+++.+|........+
T Consensus 203 ~~vi~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 282 (350)
T cd08274 203 AIVIAVAGAAKEEAVRALGADTVILRDAPLLADAKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVEL 282 (350)
T ss_pred CEEEEEeCchhhHHHHhcCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccC
Confidence 99998887668888899998766554333322244456678999999999877889999999999999998543221223
Q ss_pred HHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 172 ALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 172 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
+...+..++.++.++.. ...+.+.++++++.++++++.+++++++++++++++.+.++...+|+|++|
T Consensus 283 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 283 DLRTLYLKDLTLFGSTL-GTREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred CHHHhhhcceEEEEeec-CCHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 33444566777777664 567889999999999999888888999999999999999888889999875
No 35
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.97 E-value=5.8e-30 Score=196.05 Aligned_cols=222 Identities=25% Similarity=0.280 Sum_probs=185.4
Q ss_pred CcccceEEEecCCceeeCCCC---CChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHh
Q 045248 13 GGGLAEFAVAKESSTVARPSE---VSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKL 89 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~---~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~ 89 (240)
..+|+||.+++.+.+.|+++. +++.. ..+..+..|||.++.+.... ++|++|+|.+|+|++|..+.|+||.
T Consensus 100 ~~GWq~y~i~~~~~l~Kvd~~~~pl~~~L-gvLGmpG~TAY~gLl~igqp-----k~GetvvVSaAaGaVGsvvgQiAKl 173 (340)
T COG2130 100 VSGWQEYAISDGEGLRKLDPSPAPLSAYL-GVLGMPGLTAYFGLLDIGQP-----KAGETVVVSAAAGAVGSVVGQIAKL 173 (340)
T ss_pred cccceEEEeechhhceecCCCCCCcchHH-hhcCCchHHHHHHHHHhcCC-----CCCCEEEEEecccccchHHHHHHHh
Confidence 469999999999999999854 33332 33445567999999999988 9999999999999999999999999
Q ss_pred CCCEEEEEeC-cccHHHHHh-cCCCEEEeCCCCc-cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCch
Q 045248 90 GNTHVTASCG-ARNIEFVKS-LGADEVLDYKTPD-GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 90 ~g~~v~~~~~-~~~~~~~~~-~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
.|++|+.++. +++.+++++ +|.+.++||+.++ .+.+.+..++|+|+.||++|++.++..+..|+.++|+..+|..+.
T Consensus 174 kG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~ 253 (340)
T COG2130 174 KGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQ 253 (340)
T ss_pred hCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhh
Confidence 9999999996 589999987 9999999999988 455667778999999999999999999999999999999994321
Q ss_pred ------HHHHHHHhhheeccceeeeEEEcC-----CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCccc
Q 045248 167 ------AMLTFALKKLTFSKKQLVPLLLIP-----KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGK 235 (240)
Q Consensus 167 ------~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gk 235 (240)
..-......+..++.++.|+.... -.+.++++..|+.+|+|+-..+.+-+|+.+++||..+.+|+..||
T Consensus 254 YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK 333 (340)
T COG2130 254 YNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGK 333 (340)
T ss_pred cCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCccce
Confidence 111122334455677888876621 246789999999999999877777789999999999999999999
Q ss_pred EEEeC
Q 045248 236 IIVEP 240 (240)
Q Consensus 236 vvl~~ 240 (240)
+|+++
T Consensus 334 ~vvKv 338 (340)
T COG2130 334 LVVKV 338 (340)
T ss_pred EEEEe
Confidence 99874
No 36
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.97 E-value=1.3e-29 Score=209.53 Aligned_cols=221 Identities=20% Similarity=0.285 Sum_probs=180.9
Q ss_pred CCcccceEEEecCC-ceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhC
Q 045248 12 NGGGLAEFAVAKES-STVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLG 90 (240)
Q Consensus 12 ~~G~~~e~~~v~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~ 90 (240)
..|+|+||+.++++ .++++|+++++++++++++++.|||+++...... .++++|||+| +|++|++++|+|+.+
T Consensus 127 ~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~-----~~g~~vlI~g-~g~vG~~~~~lak~~ 200 (361)
T cd08231 127 LSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPV-----GAGDTVVVQG-AGPLGLYAVAAAKLA 200 (361)
T ss_pred CCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHc
Confidence 36999999999996 7999999999999999889999999999665555 6899999998 799999999999999
Q ss_pred CC-EEEEEeCc-ccHHHHHhcCCCEEEeCCCCcc-----ccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeC
Q 045248 91 NT-HVTASCGA-RNIEFVKSLGADEVLDYKTPDG-----AALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 91 g~-~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~-----~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g 162 (240)
|+ +|++++++ ++.+.++++|++.++++.+.+. ...+.+.+.++|++||++|+ ..+..++++++++|+++.+|
T Consensus 201 G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 280 (361)
T cd08231 201 GARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVG 280 (361)
T ss_pred CCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEc
Confidence 99 99988864 7888889999998887765432 23345667789999999987 45888999999999999998
Q ss_pred CCch-HHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCC--c--eEEecCceecchhHHHHHHHHHcCCCcccEE
Q 045248 163 PGPS-AMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEG--K--LKTVINSKHPLSKAEDAWAESIDGHATGKII 237 (240)
Q Consensus 163 ~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~--i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 237 (240)
.... ...++....+..++.++.+++. .+.+.++++++++.++ . +.++++++|+++++++||+.+.++. .+|+|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~~k~v 358 (361)
T cd08231 281 SVAPAGTVPLDPERIVRKNLTIIGVHN-YDPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGT-ALKVV 358 (361)
T ss_pred CCCCCCccccCHHHHhhcccEEEEccc-CCchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCC-ceEEE
Confidence 6532 2233344456777888888764 4667889999999887 3 4457788999999999999998877 47999
Q ss_pred EeC
Q 045248 238 VEP 240 (240)
Q Consensus 238 l~~ 240 (240)
+++
T Consensus 359 i~~ 361 (361)
T cd08231 359 IDP 361 (361)
T ss_pred eCC
Confidence 875
No 37
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.97 E-value=1e-29 Score=210.68 Aligned_cols=218 Identities=17% Similarity=0.184 Sum_probs=176.9
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|+||+++++..++++|+++++++++++++.+.|+|+++.+..++ ++|++|||+| +|++|++++|+|+.+|+
T Consensus 139 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~-----~~g~~VlV~G-~g~vG~~a~q~ak~~G~ 212 (369)
T cd08301 139 TSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKV-----KKGSTVAIFG-LGAVGLAVAEGARIRGA 212 (369)
T ss_pred cccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 48999999999999999999999999999999989999988777888 8999999998 69999999999999999
Q ss_pred -EEEEEeC-cccHHHHHhcCCCEEEeCCCC--c-cccccCCCCCcccEEEeCCCCC-CccccccCCCCC-cEEEEeCCCc
Q 045248 93 -HVTASCG-ARNIEFVKSLGADEVLDYKTP--D-GAALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTN-GKVIDITPGP 165 (240)
Q Consensus 93 -~v~~~~~-~~~~~~~~~~g~~~v~~~~~~--~-~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~g~~~ 165 (240)
+|+++++ +++.+.++++|++.++++.+. . ...+....+.++|++||++|+. .+..++++++++ |+++.+|...
T Consensus 213 ~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~ 292 (369)
T cd08301 213 SRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPH 292 (369)
T ss_pred CeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCC
Confidence 8999986 489999999999998887652 2 1223222234899999999975 478889999996 9999999654
Q ss_pred h-HHHHHHHhhheeccceeeeEEEc--CCHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 166 S-AMLTFALKKLTFSKKQLVPLLLI--PKRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 166 ~-~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
. ...++....+ ++++++.+++.. ..+.+++++++++.+++++ +.++++|+|+|+++||+.+.+++.. |+++
T Consensus 293 ~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 293 KDAVFSTHPMNL-LNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred CCcccccCHHHH-hcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 2 1222222222 467888887642 2346789999999999875 3678999999999999999988854 8876
No 38
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.97 E-value=3.6e-29 Score=204.67 Aligned_cols=219 Identities=22% Similarity=0.316 Sum_probs=182.4
Q ss_pred ccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHH
Q 045248 9 VSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 88 (240)
Q Consensus 9 ~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~ 88 (240)
+....|+++||+.+++..++++|+++++++++.+++.+.++|+++.. .++ .++++|+|+| +|++|++++++|+
T Consensus 112 ~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~-----~~~~~vlV~g-~g~iG~~~~~~a~ 184 (333)
T cd08296 112 GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRN-SGA-----KPGDLVAVQG-IGGLGHLAVQYAA 184 (333)
T ss_pred CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCC-----CCCCEEEEEC-CcHHHHHHHHHHH
Confidence 34446999999999999999999999999999999999999999944 477 8999999999 8999999999999
Q ss_pred hCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCc
Q 045248 89 LGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 89 ~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~ 165 (240)
.+|++|++++++ ++.+.++++|++.++++.+.+ ...+... .++|+++|++|. ..+..++++++++|+++.+|...
T Consensus 185 ~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 262 (333)
T cd08296 185 KMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAG 262 (333)
T ss_pred HCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCC
Confidence 999999999865 789999999999998876654 2222222 369999999974 56888999999999999998654
Q ss_pred hHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 166 SAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 166 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
. ..+++...+..++.++.++.. .....+..+++++.++++++.+ ..++++++.+||+.+.+++..||+|++
T Consensus 263 ~-~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 263 E-PVAVSPLQLIMGRKSIHGWPS-GTALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred C-CCCcCHHHHhhcccEEEEeCc-CCHHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 2 233334445577888888763 5677899999999999988775 589999999999999999999999875
No 39
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.97 E-value=5.7e-29 Score=204.48 Aligned_cols=222 Identities=23% Similarity=0.290 Sum_probs=167.9
Q ss_pred cccceEEEecCCceeeCCCCCChhh----hhhhchHHHHHHHHHHhhhCCCcCCCCCC--CeEEEEcCCchHHHHHHHHH
Q 045248 14 GGLAEFAVAKESSTVARPSEVSAAE----GSGLPVAGLTAHQALTQSAGVKLDGSGQQ--KNILVTAASGGVGHYAVQLA 87 (240)
Q Consensus 14 G~~~e~~~v~~~~~~~ip~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~~~~~~g--~~vlV~G~~g~vG~~~~~~a 87 (240)
|+|+||++++++.++++|+++++.+ +++++..+.|||+++.+..++ +++ ++|||+|++|++|++++|+|
T Consensus 101 ~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~-----~~g~~~~VlI~ga~g~vG~~aiqlA 175 (345)
T cd08293 101 WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHI-----TPGANQTMVVSGAAGACGSLAGQIG 175 (345)
T ss_pred CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccC-----CCCCCCEEEEECCCcHHHHHHHHHH
Confidence 6899999999999999999865433 456677889999999777777 665 99999998899999999999
Q ss_pred HhCCC-EEEEEeCc-ccHHHHHh-cCCCEEEeCCCCc-cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCC
Q 045248 88 KLGNT-HVTASCGA-RNIEFVKS-LGADEVLDYKTPD-GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 88 ~~~g~-~v~~~~~~-~~~~~~~~-~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~ 163 (240)
+++|+ +|++++++ ++.+.+++ +|++.++++.+.+ ...+....++++|++||++|+..+..++++++++|+++.+|.
T Consensus 176 k~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 176 RLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQ 255 (345)
T ss_pred HHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEee
Confidence 99999 89999865 77888876 9999999887655 223332234789999999998778899999999999999884
Q ss_pred Cch--H------HHHHHHhhh-eeccceeeeEEEcC----CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcC
Q 045248 164 GPS--A------MLTFALKKL-TFSKKQLVPLLLIP----KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDG 230 (240)
Q Consensus 164 ~~~--~------~~~~~~~~~-~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~ 230 (240)
... . ........+ ..+..+........ ..+.+++++++++++++++.+...++++++++||+.+.++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~ 335 (345)
T cd08293 256 ISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNG 335 (345)
T ss_pred eecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcC
Confidence 211 0 000000011 11222222221111 1345788889999999987666667999999999999999
Q ss_pred CCcccEEEeC
Q 045248 231 HATGKIIVEP 240 (240)
Q Consensus 231 ~~~gkvvl~~ 240 (240)
+..||+|+++
T Consensus 336 ~~~gkvvl~~ 345 (345)
T cd08293 336 GNIGKQIVKV 345 (345)
T ss_pred CCCCeEEEEC
Confidence 8899999875
No 40
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.97 E-value=2.2e-29 Score=207.61 Aligned_cols=215 Identities=21% Similarity=0.217 Sum_probs=164.6
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHh------hhCCCcCCCCCCCeEEEEcCCchHHHHHHH
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQ------SAGVKLDGSGQQKNILVTAASGGVGHYAVQ 85 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~------~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~ 85 (240)
.+|+|+||++++++.++++|++++ ++ +++...+.++++++.. ..+. +++++|+|+| +|++|++++|
T Consensus 119 ~~G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~-----~~g~~vlI~G-~G~vG~~a~q 190 (355)
T cd08230 119 LHGFMREYFVDDPEYLVKVPPSLA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPT-----WNPRRALVLG-AGPIGLLAAL 190 (355)
T ss_pred CCccceeEEEeccccEEECCCCCC-cc-eeecchHHHHHHHHHHHhhhhhhccc-----CCCCEEEEEC-CCHHHHHHHH
Confidence 469999999999999999999999 44 3333343454444422 1223 6899999999 7999999999
Q ss_pred HHHhCCCEEEEEeC----cccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEE
Q 045248 86 LAKLGNTHVTASCG----ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVID 160 (240)
Q Consensus 86 ~a~~~g~~v~~~~~----~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~ 160 (240)
+|+++|++|+++++ +++++.++++|++. +++.+++..... ...++|+|||++|++ .+..++++++++|+++.
T Consensus 191 ~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~ 267 (355)
T cd08230 191 LLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPVAEVK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVIL 267 (355)
T ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccchhhhh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEE
Confidence 99999999999885 46888999999986 455443322111 235899999999975 58899999999999999
Q ss_pred eCCCch-HHHHHH----HhhheeccceeeeEEEcCCHHHHHHHHHHHHCCc------eEEecCceecchhHHHHHHHHHc
Q 045248 161 ITPGPS-AMLTFA----LKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGK------LKTVINSKHPLSKAEDAWAESID 229 (240)
Q Consensus 161 ~g~~~~-~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------i~~~~~~~~~~~~~~~a~~~~~~ 229 (240)
+|.... ....++ ...+.+++.++.+++. ...++++++++++.++. ++++++++|+++|+++||+.+.+
T Consensus 268 ~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~ 346 (355)
T cd08230 268 FGVPGGGREFEVDGGELNRDLVLGNKALVGSVN-ANKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPD 346 (355)
T ss_pred EecCCCCCccccChhhhhhhHhhcCcEEEEecC-CchhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhccc
Confidence 996543 222222 3456778999999763 56678999999999876 56678999999999999998865
Q ss_pred CCCcccEEEeC
Q 045248 230 GHATGKIIVEP 240 (240)
Q Consensus 230 ~~~~gkvvl~~ 240 (240)
+. +|+|+++
T Consensus 347 ~~--~K~v~~~ 355 (355)
T cd08230 347 GE--IKVVIEW 355 (355)
T ss_pred CC--eEEEeeC
Confidence 54 5999874
No 41
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.97 E-value=5.2e-29 Score=202.88 Aligned_cols=228 Identities=20% Similarity=0.258 Sum_probs=183.5
Q ss_pred eecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHH
Q 045248 6 RIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQ 85 (240)
Q Consensus 6 ~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~ 85 (240)
++......|+|++|+.+++..++++|++++++++++++..+.++|+++ ...++ .++++|||+|++|.+|++++|
T Consensus 85 ~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~-----~~g~~vlI~g~~g~ig~~~~~ 158 (324)
T cd08292 85 RVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGV-----KPGQWLIQNAAGGAVGKLVAM 158 (324)
T ss_pred EEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCC-----CCCCEEEEcccccHHHHHHHH
Confidence 333333479999999999999999999999999999988889999998 55777 899999999989999999999
Q ss_pred HHHhCCCEEEEEeC-cccHHHHHhcCCCEEEeCCCCcc--ccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeC
Q 045248 86 LAKLGNTHVTASCG-ARNIEFVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 86 ~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g 162 (240)
+|+.+|++++++++ +++.+.++++|++.++++.+.+. ...+.+.++++|+++|++|+.....++++++++|+++.+|
T Consensus 159 ~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g 238 (324)
T cd08292 159 LAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFG 238 (324)
T ss_pred HHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEe
Confidence 99999999988886 47788888899988888765442 2335567789999999999877889999999999999998
Q ss_pred CCchHHHHHHHhhheeccceeeeEEEcC---------CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCc
Q 045248 163 PGPSAMLTFALKKLTFSKKQLVPLLLIP---------KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHAT 233 (240)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~ 233 (240)
........+.......++.++.++.... ..+.++++++++.++.+.+.+.+.|+++++++|++.+.++...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~ 318 (324)
T cd08292 239 SMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRA 318 (324)
T ss_pred cCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCC
Confidence 6432222223333345666776665311 1346888999999999986677899999999999999888778
Q ss_pred ccEEEe
Q 045248 234 GKIIVE 239 (240)
Q Consensus 234 gkvvl~ 239 (240)
+|+|+.
T Consensus 319 ~kvvv~ 324 (324)
T cd08292 319 GKVLLR 324 (324)
T ss_pred ceEEeC
Confidence 898863
No 42
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.96 E-value=5.7e-29 Score=208.00 Aligned_cols=222 Identities=23% Similarity=0.298 Sum_probs=182.6
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHh--hhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHh
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQ--SAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKL 89 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~ 89 (240)
.+|+|+||++++++.++++|+++++++++.++..+.+||+++.. ..++ .++++++|+|++|++|++++|+|+.
T Consensus 138 ~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~-----~~g~~vlV~Ga~g~vG~~ai~~ak~ 212 (398)
T TIGR01751 138 NFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATV-----KPGDNVLIWGAAGGLGSYATQLARA 212 (398)
T ss_pred CCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCC-----CCCCEEEEEcCCcHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999854 3556 7899999999889999999999999
Q ss_pred CCCEEEEEeC-cccHHHHHhcCCCEEEeCCCCcc------------------------ccccCCCCCcccEEEeCCCCCC
Q 045248 90 GNTHVTASCG-ARNIEFVKSLGADEVLDYKTPDG------------------------AALKSPSGRKYDAVIHCATGIP 144 (240)
Q Consensus 90 ~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~------------------------~~~~~~~~~~~d~v~d~~g~~~ 144 (240)
+|++++++++ +++.+.++++|++.++++.+.+. ...+.+.++++|++|||+|...
T Consensus 213 ~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~ 292 (398)
T TIGR01751 213 GGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT 292 (398)
T ss_pred cCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH
Confidence 9998887775 47889999999999998654210 0122345578999999999877
Q ss_pred ccccccCCCCCcEEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHH
Q 045248 145 WSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAW 224 (240)
Q Consensus 145 ~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~ 224 (240)
+..++++++++|+++.+|........+....+..++.++.+... ...+.+++++++++++.+.+.+++++++++++++|
T Consensus 293 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~ 371 (398)
T TIGR01751 293 FPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHF-ANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAH 371 (398)
T ss_pred HHHHHHhhccCCEEEEEccccCCCCCcCHHHHhhcccEEEcccc-CcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHH
Confidence 88899999999999999865432223333444566666766553 45566889999999999998888999999999999
Q ss_pred HHHHcCCCcccEEEe
Q 045248 225 AESIDGHATGKIIVE 239 (240)
Q Consensus 225 ~~~~~~~~~gkvvl~ 239 (240)
+.+.++...||+|+.
T Consensus 372 ~~~~~~~~~gkvvv~ 386 (398)
T TIGR01751 372 QDVHRNHHQGNVAVL 386 (398)
T ss_pred HHHHcCCCCceEEEE
Confidence 999999989999986
No 43
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.96 E-value=6.9e-29 Score=203.58 Aligned_cols=229 Identities=26% Similarity=0.350 Sum_probs=184.1
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhh-hCCCcCCCCCCCeEEEEcCCchHH
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQS-AGVKLDGSGQQKNILVTAASGGVG 80 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~~~g~~vlV~G~~g~vG 80 (240)
|+++.+.+...+|+|++|+.++++.++++|++++++++++++..+.|||+++... ..+ .++++|||+| +|++|
T Consensus 107 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~-----~~~~~vlI~g-~~~vg 180 (340)
T cd05284 107 CENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYL-----DPGSTVVVIG-VGGLG 180 (340)
T ss_pred CCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccC-----CCCCEEEEEc-CcHHH
Confidence 4445555555689999999999999999999999999999999999999999665 356 7899999999 67799
Q ss_pred HHHHHHHHhCC-CEEEEEeC-cccHHHHHhcCCCEEEeCCCCccccc-cCCCCCcccEEEeCCCC-CCccccccCCCCCc
Q 045248 81 HYAVQLAKLGN-THVTASCG-ARNIEFVKSLGADEVLDYKTPDGAAL-KSPSGRKYDAVIHCATG-IPWSTFEPNLGTNG 156 (240)
Q Consensus 81 ~~~~~~a~~~g-~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~-~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G 156 (240)
++++|+|+..| .+|+++++ +++.+.++++|+++++++.+.....+ +...+.++|+++|++|+ .....++++++++|
T Consensus 181 ~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g 260 (340)
T cd05284 181 HIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGG 260 (340)
T ss_pred HHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCC
Confidence 99999999999 69998886 47888889999999888665421222 33455689999999996 55888999999999
Q ss_pred EEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccE
Q 045248 157 KVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKI 236 (240)
Q Consensus 157 ~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 236 (240)
+++.+|.... ..........++.++.+... ...+.+.+++++++++.+++ ..+.|+++++++|++.+.+++..||+
T Consensus 261 ~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkv 336 (340)
T cd05284 261 RYVIVGYGGH--GRLPTSDLVPTEISVIGSLW-GTRAELVEVVALAESGKVKV-EITKFPLEDANEALDRLREGRVTGRA 336 (340)
T ss_pred EEEEEcCCCC--CccCHHHhhhcceEEEEEec-ccHHHHHHHHHHHHhCCCCc-ceEEEeHHHHHHHHHHHHcCCccceE
Confidence 9999986542 11112222356677776553 45678899999999999886 44679999999999999999889999
Q ss_pred EEeC
Q 045248 237 IVEP 240 (240)
Q Consensus 237 vl~~ 240 (240)
|+.|
T Consensus 337 v~~~ 340 (340)
T cd05284 337 VLVP 340 (340)
T ss_pred EecC
Confidence 9875
No 44
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.96 E-value=6.1e-29 Score=208.42 Aligned_cols=223 Identities=17% Similarity=0.188 Sum_probs=172.7
Q ss_pred CCCcccceEEEecCC----ceeeCCCCCChhhhhhh-chHH-HHHHHHHH--------hhhCCCcCCCCCCCeEEEEcCC
Q 045248 11 HNGGGLAEFAVAKES----STVARPSEVSAAEGSGL-PVAG-LTAHQALT--------QSAGVKLDGSGQQKNILVTAAS 76 (240)
Q Consensus 11 ~~~G~~~e~~~v~~~----~~~~ip~~~~~~~aa~~-~~~~-~ta~~~l~--------~~~~~~~~~~~~g~~vlV~G~~ 76 (240)
..+|+|+||++++++ .++++|+++++++++.+ +.+. .+++.++. +..++ ++|++|+|+|++
T Consensus 111 ~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~-----~~g~~VlV~G~~ 185 (410)
T cd08238 111 TYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGI-----KPGGNTAILGGA 185 (410)
T ss_pred cCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCC-----CCCCEEEEEeCC
Confidence 357999999999997 68999999999998865 4221 23444432 34566 899999999989
Q ss_pred chHHHHHHHHHHhCCC---EEEEEeCc-ccHHHHHhc--------CCC-EEEeCCC-Cc-cc-cccCCCCCcccEEEeCC
Q 045248 77 GGVGHYAVQLAKLGNT---HVTASCGA-RNIEFVKSL--------GAD-EVLDYKT-PD-GA-ALKSPSGRKYDAVIHCA 140 (240)
Q Consensus 77 g~vG~~~~~~a~~~g~---~v~~~~~~-~~~~~~~~~--------g~~-~v~~~~~-~~-~~-~~~~~~~~~~d~v~d~~ 140 (240)
|++|++++|+|+.+|+ +|++++++ ++++.++++ |++ .++++.+ .+ .. ..+.+.+.++|+++|++
T Consensus 186 G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~ 265 (410)
T cd08238 186 GPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFV 265 (410)
T ss_pred CHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcC
Confidence 9999999999999864 79888864 789999887 766 5676543 22 22 23345667899999999
Q ss_pred CC-CCccccccCCCCCcEEEEeCC-Cc-hHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCcee
Q 045248 141 TG-IPWSTFEPNLGTNGKVIDITP-GP-SAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKH 215 (240)
Q Consensus 141 g~-~~~~~~~~~l~~~G~iv~~g~-~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~ 215 (240)
|. ..+..++++++++|+++.++. .. ....+++...+.++++++++++. ...++++++++++++|++++ +++++|
T Consensus 266 g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~li~~g~i~~~~~it~~~ 344 (410)
T cd08238 266 PVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSG-GNTDDMKEAIDLMAAGKLNPARMVTHIG 344 (410)
T ss_pred CCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCC-CCHHHHHHHHHHHHcCCCchhhcEEEEe
Confidence 86 558899999999998876643 21 11233455567788899999763 56778999999999999986 789999
Q ss_pred cchhHHHHHHHHHcCCCcccEEEeC
Q 045248 216 PLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 216 ~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
+|+++++||+.+. ++..||+|+.+
T Consensus 345 ~l~~~~~A~~~~~-~~~~gKvvl~~ 368 (410)
T cd08238 345 GLNAAAETTLNLP-GIPGGKKLIYT 368 (410)
T ss_pred cHHHHHHHHHHhh-ccCCceEEEEC
Confidence 9999999999999 67789999864
No 45
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.96 E-value=1.8e-28 Score=201.24 Aligned_cols=225 Identities=25% Similarity=0.374 Sum_probs=184.7
Q ss_pred cccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHH
Q 045248 8 DVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLA 87 (240)
Q Consensus 8 ~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a 87 (240)
.+....|+|++|+.++++.++++|++++++++++++..+.|||+++.. .++ ++++++||+|+++++|++++++|
T Consensus 113 ~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~-----~~~~~vlV~g~~~~vg~~~~~~a 186 (341)
T cd08297 113 SGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGL-----KPGDWVVISGAGGGLGHLGVQYA 186 (341)
T ss_pred cccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCC-----CCCCEEEEECCCchHHHHHHHHH
Confidence 344457999999999999999999999999999999999999999855 466 89999999998888999999999
Q ss_pred HhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cc-cccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCC
Q 045248 88 KLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 88 ~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~ 163 (240)
+++|++|++++++ ++.+.++++|++.++++.+.+ .. ..+...++++|+++|+.++ ..+..++++++++|+++.+|.
T Consensus 187 ~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~ 266 (341)
T cd08297 187 KAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGL 266 (341)
T ss_pred HHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecC
Confidence 9999999999865 788888999999998876644 22 3344556789999997765 558889999999999999986
Q ss_pred CchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 164 GPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
......++....+..++.++.+... ...+.+++++++++++.+.+.+ ..+++++++++++.+..+...||+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 267 PPGGFIPLDPFDLVLRGITIVGSLV-GTRQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred CCCCCCCCCHHHHHhcccEEEEecc-CCHHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 5432223333444466777777543 3578899999999999998755 5799999999999999998899999875
No 46
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.96 E-value=6.9e-29 Score=200.70 Aligned_cols=204 Identities=19% Similarity=0.195 Sum_probs=159.6
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|+||++++++.++++|++++++. ++++ ...|||+++.+ . . .++++++|+| +|++|++++|+|+++|+
T Consensus 100 ~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~-----~~~~~vlV~G-~G~vG~~a~q~ak~~G~ 169 (308)
T TIGR01202 100 FGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-E-----VKVLPDLIVG-HGTLGRLLARLTKAAGG 169 (308)
T ss_pred CCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-c-----cCCCcEEEEC-CCHHHHHHHHHHHHcCC
Confidence 69999999999999999999999864 4444 35799999944 3 2 4688999998 89999999999999999
Q ss_pred EEE-EEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCchHHH
Q 045248 93 HVT-ASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGPSAML 169 (240)
Q Consensus 93 ~v~-~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~ 169 (240)
+++ ++... ++++.+++. .++++.+. .+.++|++|||+|+. .+..++++++++|+++.+|.... ..
T Consensus 170 ~~v~~~~~~~~rl~~a~~~---~~i~~~~~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~~ 237 (308)
T TIGR01202 170 SPPAVWETNPRRRDGATGY---EVLDPEKD--------PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE-PV 237 (308)
T ss_pred ceEEEeCCCHHHHHhhhhc---cccChhhc--------cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC-Cc
Confidence 654 44433 555555443 44544321 245799999999985 48899999999999999996533 23
Q ss_pred HHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 170 TFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 170 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
.++...+..++.++.++.. ...++++++++++++|++++ +++++|+|+|+++||+.+.++...+|++++
T Consensus 238 ~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 238 NFDFVPAFMKEARLRIAAE-WQPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ccccchhhhcceEEEEecc-cchhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 3444556677788887653 46778999999999999874 789999999999999998877777899874
No 47
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.96 E-value=4.6e-28 Score=201.51 Aligned_cols=219 Identities=16% Similarity=0.151 Sum_probs=164.4
Q ss_pred CCcccceEEEecCC--ceeeCCCCCCh----hhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHH
Q 045248 12 NGGGLAEFAVAKES--STVARPSEVSA----AEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQ 85 (240)
Q Consensus 12 ~~G~~~e~~~v~~~--~~~~ip~~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~ 85 (240)
.+|+|+||+++++. .++++|++++. .+++++...+.++|+++ ...++ +++++|+|.| +|++|++++|
T Consensus 131 ~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~-----~~g~~VlV~G-~G~iG~~aiq 203 (393)
T TIGR02819 131 WVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGV-----GPGSTVYIAG-AGPVGLAAAA 203 (393)
T ss_pred CCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHH
Confidence 36999999999964 79999998754 34667777888999998 55677 8999999977 8999999999
Q ss_pred HHHhCCCEEEEE-eC-cccHHHHHhcCCCEEEeCCC-Cc-cc-cccCCCCCcccEEEeCCCCC---------------Cc
Q 045248 86 LAKLGNTHVTAS-CG-ARNIEFVKSLGADEVLDYKT-PD-GA-ALKSPSGRKYDAVIHCATGI---------------PW 145 (240)
Q Consensus 86 ~a~~~g~~v~~~-~~-~~~~~~~~~~g~~~v~~~~~-~~-~~-~~~~~~~~~~d~v~d~~g~~---------------~~ 145 (240)
+|+.+|++++.+ ++ +++++.++++|++. +++.. .+ .. ..+.+.+.++|++||++|.+ .+
T Consensus 204 lAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~ 282 (393)
T TIGR02819 204 SAQLLGAAVVIVGDLNPARLAQARSFGCET-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVL 282 (393)
T ss_pred HHHHcCCceEEEeCCCHHHHHHHHHcCCeE-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHH
Confidence 999999965444 44 46999999999974 54432 23 22 23345567899999999975 58
Q ss_pred cccccCCCCCcEEEEeCCCc-hHH-----------HHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ec
Q 045248 146 STFEPNLGTNGKVIDITPGP-SAM-----------LTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VI 211 (240)
Q Consensus 146 ~~~~~~l~~~G~iv~~g~~~-~~~-----------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~ 211 (240)
.+++++++++|+++.+|... +.. .++.......++.++.+.. ....+.+.++++++++|++.. ++
T Consensus 283 ~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~-~~~~~~~~~~~~~~~~g~i~~~~~i 361 (393)
T TIGR02819 283 NSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ-TPVMKYNRNLMQAILHDRVQIAKAV 361 (393)
T ss_pred HHHHHHhhCCCEEEEeeecCCcccccccccccccccccchHHhhccCceEEecc-CChhhhHHHHHHHHHcCCCCHHHce
Confidence 89999999999999999742 111 1122233344555666532 222344578999999999864 56
Q ss_pred C-ceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 212 N-SKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 212 ~-~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
+ ++|+|+|+++||+.+.+++ .+|+++++
T Consensus 362 ~~~~~~l~~~~~a~~~~~~~~-~~Kvvi~~ 390 (393)
T TIGR02819 362 NVTVISLDDAPEGYAEFDAGA-AKKFVIDP 390 (393)
T ss_pred ecceecHHHHHHHHHHHhhCC-ceEEEEeC
Confidence 6 7899999999999998875 47999874
No 48
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.96 E-value=1.3e-27 Score=194.63 Aligned_cols=222 Identities=27% Similarity=0.334 Sum_probs=180.6
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|++|+.+++..++++|+++++++++++++.+.|||..+ ....+ +++++++|+|++|++|++++++|+.+|+
T Consensus 95 ~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~-~~~~~-----~~~~~vlI~g~~~~~g~~~~~la~~~g~ 168 (324)
T cd08244 95 GGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLL-DLATL-----TPGDVVLVTAAAGGLGSLLVQLAKAAGA 168 (324)
T ss_pred CceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHH-HhcCC-----CCCCEEEEEcCCchHHHHHHHHHHHCCC
Confidence 79999999999999999999999999999999999996544 67777 8999999999999999999999999999
Q ss_pred EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cc-cccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHHH
Q 045248 93 HVTASCGA-RNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAML 169 (240)
Q Consensus 93 ~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~ 169 (240)
+|+++++. ++.+.++++|++.+++..+.+ .. ..+...++++|+++|++|+.....++++++++|+++.+|.......
T Consensus 169 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~ 248 (324)
T cd08244 169 TVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGEWT 248 (324)
T ss_pred EEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCCCC
Confidence 99999864 788888999998888876544 22 2344566789999999998778889999999999999986433222
Q ss_pred HHHHhhheeccceeeeEEEcC-----CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 170 TFALKKLTFSKKQLVPLLLIP-----KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 170 ~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
.+.......++.++.+..... ..+.+.+++++++++.+.+.++..++++++++|++.+.++...||+|++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 249 ALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred ccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 222222334555665554311 14567888999999999877888999999999999999998899999875
No 49
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.96 E-value=7.2e-28 Score=198.39 Aligned_cols=222 Identities=21% Similarity=0.238 Sum_probs=177.1
Q ss_pred CCcccceEEEecCC--ceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHh
Q 045248 12 NGGGLAEFAVAKES--STVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKL 89 (240)
Q Consensus 12 ~~G~~~e~~~v~~~--~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~ 89 (240)
.+|+|+||+.++.. .++++|++++++++++++..+.||++++ ...++ +++++|||+| +|++|++++|+|+.
T Consensus 116 ~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-----~~g~~vlI~g-~g~iG~~~~~lak~ 188 (351)
T cd08285 116 KDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGA-ELANI-----KLGDTVAVFG-IGPVGLMAVAGARL 188 (351)
T ss_pred CCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHHH-HccCC-----CCCCEEEEEC-CCHHHHHHHHHHHH
Confidence 47999999999974 8999999999999999988889999997 66777 8999999997 79999999999999
Q ss_pred CCC-EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cc-cccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCC
Q 045248 90 GNT-HVTASCGA-RNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 90 ~g~-~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~ 164 (240)
+|+ +|++++++ ++.+.++++|++.++++...+ .. ....+.+.++|+++|++|+. .+..++++++++|+++.+|..
T Consensus 189 ~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~ 268 (351)
T cd08285 189 RGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYY 268 (351)
T ss_pred cCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEeccc
Confidence 999 68888765 788999999999999876554 22 23344567899999999974 588999999999999999864
Q ss_pred chH-HHHHH--HhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE---ecCceecchhHHHHHHHHHcCCC-cccEE
Q 045248 165 PSA-MLTFA--LKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT---VINSKHPLSKAEDAWAESIDGHA-TGKII 237 (240)
Q Consensus 165 ~~~-~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~~a~~~~~~~~~-~gkvv 237 (240)
... ...++ ......+..++.+.+...+.+.++++++++++|++++ .+++.++++++++|++.+.+++. ..|++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~ 348 (351)
T cd08285 269 GEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPV 348 (351)
T ss_pred CCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEE
Confidence 431 11111 1112244556665543345678999999999999887 44557999999999999998874 67999
Q ss_pred EeC
Q 045248 238 VEP 240 (240)
Q Consensus 238 l~~ 240 (240)
+.+
T Consensus 349 ~~~ 351 (351)
T cd08285 349 IIF 351 (351)
T ss_pred EeC
Confidence 875
No 50
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3e-27 Score=190.94 Aligned_cols=222 Identities=29% Similarity=0.381 Sum_probs=178.9
Q ss_pred eecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHH
Q 045248 6 RIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQ 85 (240)
Q Consensus 6 ~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~ 85 (240)
++.+....|+|++|+.++++.++++|+++++++++++++.+.|||+++...... ++++++|+|+.|++|+++++
T Consensus 78 ~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~------~~~~vli~g~~~~~g~~~~~ 151 (305)
T cd08270 78 RVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL------LGRRVLVTGASGGVGRFAVQ 151 (305)
T ss_pred EEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC------CCCEEEEECCCcHHHHHHHH
Confidence 333443479999999999999999999999999999999999999999555433 59999999988999999999
Q ss_pred HHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 86 LAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 86 ~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
+++.+|++|+.+++. ++.+.++++|++.++..... . .++++|+++|++|+..+..++++++++|+++.+|..
T Consensus 152 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~------~-~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~ 224 (305)
T cd08270 152 LAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGSE------L-SGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSS 224 (305)
T ss_pred HHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecccc------c-cCCCceEEEECCCcHHHHHHHHHhcCCCEEEEEecc
Confidence 999999999999864 78999999998766543221 1 124799999999988889999999999999999864
Q ss_pred chHHHHHHHhhhee--ccceeeeEEEc---CCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 165 PSAMLTFALKKLTF--SKKQLVPLLLI---PKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 165 ~~~~~~~~~~~~~~--~~~~i~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
.......+...+.. ++.++.+.... ...+.++.++++++++++.+.+.+++++++++++++.+.++...||+|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 304 (305)
T cd08270 225 SGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLD 304 (305)
T ss_pred CCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 32222222333322 56677776542 12467889999999999998788899999999999999999888999987
Q ss_pred C
Q 045248 240 P 240 (240)
Q Consensus 240 ~ 240 (240)
+
T Consensus 305 ~ 305 (305)
T cd08270 305 V 305 (305)
T ss_pred C
Confidence 5
No 51
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.96 E-value=5.9e-28 Score=183.51 Aligned_cols=230 Identities=24% Similarity=0.294 Sum_probs=190.2
Q ss_pred ceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHH
Q 045248 5 WRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAV 84 (240)
Q Consensus 5 ~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~ 84 (240)
|........|+|++|.+.+++.++++++.++++.||++.++.+|||.++.+.-++ ++|++|...||.+++|.+.+
T Consensus 104 ~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L-----~~GD~vIQNganS~VG~~Vi 178 (354)
T KOG0025|consen 104 WVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQL-----NKGDSVIQNGANSGVGQAVI 178 (354)
T ss_pred eEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhc-----CCCCeeeecCcccHHHHHHH
Confidence 3334455679999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHhCCCEEEEEeCc-ccH----HHHHhcCCCEEEeCCCCcccc--ccCCCCCcccEEEeCCCCCCccccccCCCCCcE
Q 045248 85 QLAKLGNTHVTASCGA-RNI----EFVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGK 157 (240)
Q Consensus 85 ~~a~~~g~~v~~~~~~-~~~----~~~~~~g~~~v~~~~~~~~~~--~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~ 157 (240)
|+|+++|++-+.++++ ... +.++.+||++|+...+..... .......++.+.|+|+|+.+.....+.|.+||.
T Consensus 179 Qlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~Ggt 258 (354)
T KOG0025|consen 179 QLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGT 258 (354)
T ss_pred HHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCce
Confidence 9999999999988865 333 455789999998644332111 112244678999999999888889999999999
Q ss_pred EEEeCCCchHHHHHHHhhheeccceeeeEEEcC----C------HHHHHHHHHHHHCCceEEecCceecchhHHHHHHHH
Q 045248 158 VIDITPGPSAMLTFALKKLTFSKKQLVPLLLIP----K------RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAES 227 (240)
Q Consensus 158 iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~ 227 (240)
++.+|..+..+...+...+.|+.+.++|+|+.. + .+.+.++.++...|++........+|.+...|++..
T Consensus 259 mvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~ 338 (354)
T KOG0025|consen 259 MVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAA 338 (354)
T ss_pred EEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHH
Confidence 999999988889999999999999999999821 1 246789999999999998777788899988888876
Q ss_pred HcCCC-cccEEEe
Q 045248 228 IDGHA-TGKIIVE 239 (240)
Q Consensus 228 ~~~~~-~gkvvl~ 239 (240)
.+.-. .||-++.
T Consensus 339 L~~~~~~~Kq~i~ 351 (354)
T KOG0025|consen 339 LSKFGKSGKQIIV 351 (354)
T ss_pred HHHhccCCceEEE
Confidence 65433 3455543
No 52
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.96 E-value=7.1e-28 Score=196.41 Aligned_cols=227 Identities=23% Similarity=0.287 Sum_probs=170.6
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
.+|+|+||+.++++.++++|+++++++++.+++.+.||++++........ ...+++|+|+|++|++|++++|+|+.+|
T Consensus 94 ~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~--~~~~~~vlI~g~~g~vg~~~~~~a~~~g 171 (326)
T cd08289 94 HHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGL--TPEQGPVLVTGATGGVGSLAVSILAKLG 171 (326)
T ss_pred CCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCC--CCCCCEEEEEcCCchHHHHHHHHHHHCC
Confidence 47999999999999999999999999999999999999988854322100 0357899999988999999999999999
Q ss_pred CEEEEEeC-cccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHHHH
Q 045248 92 THVTASCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAMLT 170 (240)
Q Consensus 92 ~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~ 170 (240)
++|+++++ +++.+.++++|++.+++..+.....+....+.++|+++|++|+..+..++++++++|+++.+|.......+
T Consensus 172 ~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~~~~~ 251 (326)
T cd08289 172 YEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGGGEVE 251 (326)
T ss_pred CeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCCCCCC
Confidence 99999886 47899999999988887654322222222356799999999987788999999999999999865322222
Q ss_pred HHHhhheeccceeeeEEEcCC-----HHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 171 FALKKLTFSKKQLVPLLLIPK-----RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 171 ~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
.....+..++.++.+...... .+.+..+.+.+....+.+.++++++++++++||+.+.+++..||+|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 252 TTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 223334466677777642111 1223333333322333345688999999999999999999899999874
No 53
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.96 E-value=1.7e-27 Score=193.84 Aligned_cols=222 Identities=24% Similarity=0.321 Sum_probs=180.7
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|++|+.++.+.++++|+++++.+++.++..+.+||+++.....+ .++++|+|+|++|++|++++++|+.+|+
T Consensus 90 ~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~-----~~~~~vlI~g~~~~vg~~~~~~a~~~g~ 164 (323)
T cd05282 90 EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKL-----PPGDWVIQNAANSAVGRMLIQLAKLLGF 164 (323)
T ss_pred CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccC-----CCCCEEEEcccccHHHHHHHHHHHHCCC
Confidence 68999999999999999999999999999999999999998777777 7999999999889999999999999999
Q ss_pred EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-c-ccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHHH
Q 045248 93 HVTASCGA-RNIEFVKSLGADEVLDYKTPD-G-AALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAML 169 (240)
Q Consensus 93 ~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~ 169 (240)
++++++++ ++.+.++++|++.++++.+.+ . ...+.+.+.++|+++|++|+......+++++++|+++.+|.......
T Consensus 165 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~ 244 (323)
T cd05282 165 KTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPV 244 (323)
T ss_pred eEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCC
Confidence 99988864 788889999999988876543 2 23345567789999999998777788999999999999985432211
Q ss_pred HHHHhhheeccceeeeEEEcC-----C----HHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 170 TFALKKLTFSKKQLVPLLLIP-----K----RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 170 ~~~~~~~~~~~~~i~~~~~~~-----~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
.+....+..++.++.+..... . .+.++++++++.++++.+.+++.+++++++++++.+.++...+|+|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 245 PFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred CCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 222222223556666654311 1 245788999999999987778899999999999999988888899874
No 54
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.96 E-value=6.9e-28 Score=197.18 Aligned_cols=228 Identities=27% Similarity=0.313 Sum_probs=181.6
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHH
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGH 81 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~ 81 (240)
|+.+...+...+|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++... .+ .++++++|+|++|++|+
T Consensus 104 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~-----~~~~~vlI~g~~g~~g~ 177 (334)
T PRK13771 104 CKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GV-----KKGETVLVTGAGGGVGI 177 (334)
T ss_pred CccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CC-----CCCCEEEEECCCccHHH
Confidence 4444444445579999999999999999999999999999999999999998554 77 89999999998899999
Q ss_pred HHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEE
Q 045248 82 YAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVID 160 (240)
Q Consensus 82 ~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~ 160 (240)
+++|+++..|++|++++++ ++.+.++++ ++.+++.. .....+... .++|+++|++|+..+..++++++++|+++.
T Consensus 178 ~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~ 253 (334)
T PRK13771 178 HAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS-KFSEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQ 253 (334)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch-hHHHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEE
Confidence 9999999999999988864 778888888 76666554 112222222 269999999998778899999999999999
Q ss_pred eCCCchHHH-HHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 161 ITPGPSAML-TFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 161 ~g~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
+|....... .........++.++.+.. ....+.+++++++++++.+++.+++.++++++++|++.+.++...||++++
T Consensus 254 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (334)
T PRK13771 254 IGNVDPSPTYSLRLGYIILKDIEIIGHI-SATKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVK 332 (334)
T ss_pred EeccCCCCCcccCHHHHHhcccEEEEec-CCCHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 986432111 111222234566777654 356788999999999999988788899999999999999988888999986
Q ss_pred C
Q 045248 240 P 240 (240)
Q Consensus 240 ~ 240 (240)
+
T Consensus 333 ~ 333 (334)
T PRK13771 333 P 333 (334)
T ss_pred c
Confidence 4
No 55
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.96 E-value=3.4e-27 Score=193.34 Aligned_cols=216 Identities=24% Similarity=0.344 Sum_probs=180.4
Q ss_pred CCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhC
Q 045248 11 HNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLG 90 (240)
Q Consensus 11 ~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~ 90 (240)
...|+|+||+.++++.++++|+++++++++.+++.+.+||+++.. ..+ .++++++|.| +|++|++++++++.+
T Consensus 120 ~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~-----~~g~~vlV~g-~g~vG~~~~~~a~~~ 192 (337)
T cd05283 120 ITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKR-NGV-----GPGKRVGVVG-IGGLGHLAVKFAKAL 192 (337)
T ss_pred cCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHh-cCC-----CCCCEEEEEC-CcHHHHHHHHHHHHc
Confidence 457999999999999999999999999999999999999999844 456 7999999987 899999999999999
Q ss_pred CCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC-ccccccCCCCCcEEEEeCCCchHH
Q 045248 91 NTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDITPGPSAM 168 (240)
Q Consensus 91 g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~ 168 (240)
|++|++++++ ++.+.++++|++.+++....+.. + ..+.++|+++|++|... +..++++++++|+++.+|......
T Consensus 193 G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~--~-~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 269 (337)
T cd05283 193 GAEVTAFSRSPSKKEDALKLGADEFIATKDPEAM--K-KAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPL 269 (337)
T ss_pred CCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhh--h-hccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCC
Confidence 9999998865 78888999999988876543311 1 12467999999999874 889999999999999998654321
Q ss_pred HHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 169 LTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 169 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
.++...+..++.++.+.+. ...+.++.++++++++++.+.+ +.++++++++||+.+.+++..||+|++
T Consensus 270 -~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 270 -PVPPFPLIFGRKSVAGSLI-GGRKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred -ccCHHHHhcCceEEEEecc-cCHHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 2333444568888888775 5778899999999999988754 689999999999999999999999874
No 56
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.95 E-value=1.4e-27 Score=196.63 Aligned_cols=220 Identities=26% Similarity=0.358 Sum_probs=180.7
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|++++|+.++.+.++++|+++++.+++++++.+.|||+++.....+ +++++|+|+| +|++|++++|+|+..|
T Consensus 126 ~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~-----~~~~~vlI~g-~g~vg~~~~~~a~~~G 199 (350)
T cd08240 126 QDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPL-----VADEPVVIIG-AGGLGLMALALLKALG 199 (350)
T ss_pred ccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccC-----CCCCEEEEEC-CcHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999999999999999766655 6899999997 8999999999999999
Q ss_pred C-EEEEEeCc-ccHHHHHhcCCCEEEeCCCCcc-ccc-cCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCch
Q 045248 92 T-HVTASCGA-RNIEFVKSLGADEVLDYKTPDG-AAL-KSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 92 ~-~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~-~~~-~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
+ +|++++++ ++.+.++++|++.+++..+... ..+ +...+ ++|++||++|. ..+..++++++++|+++.+|....
T Consensus 200 ~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~ 278 (350)
T cd08240 200 PANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGG 278 (350)
T ss_pred CCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCC
Confidence 9 78888764 7889999999988887665442 222 33333 89999999986 558899999999999999986433
Q ss_pred HHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 167 AMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
. .........+++.++.+.+. ...+.+.+++++++++.+++.....+++++++++++.+.++...||+++++
T Consensus 279 ~-~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 279 E-ATLPLPLLPLRALTIQGSYV-GSLEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred C-CcccHHHHhhcCcEEEEccc-CCHHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 2 11223334557777777653 456789999999999998876777899999999999999988889999864
No 57
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.95 E-value=1.8e-27 Score=195.22 Aligned_cols=222 Identities=25% Similarity=0.312 Sum_probs=178.9
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|++|+.++++.++++|+++++++++++++.+.|||+++.....+ +++++|||+|++|++|++++|+|++.|+
T Consensus 98 ~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~-----~~g~~vlI~g~~g~vg~~~~~~a~~~g~ 172 (341)
T cd08290 98 LGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKL-----QPGDWVIQNGANSAVGQAVIQLAKLLGI 172 (341)
T ss_pred CccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhccc-----CCCCEEEEccchhHHHHHHHHHHHHcCC
Confidence 59999999999999999999999999999999999999999777777 8999999999889999999999999999
Q ss_pred EEEEEeCc-----ccHHHHHhcCCCEEEeCCCC---c-cccc-cCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeC
Q 045248 93 HVTASCGA-----RNIEFVKSLGADEVLDYKTP---D-GAAL-KSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 93 ~v~~~~~~-----~~~~~~~~~g~~~v~~~~~~---~-~~~~-~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g 162 (240)
++++++++ ++.+.++++|++.++++... + ...+ ....+ ++|++|||+|+..+...+++++++|+++.+|
T Consensus 173 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g 251 (341)
T cd08290 173 KTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGGKSATELARLLSPGGTMVTYG 251 (341)
T ss_pred eEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCcHhHHHHHHHhCCCCEEEEEe
Confidence 99888864 45788889999999887653 3 2222 23344 8999999999887778999999999999998
Q ss_pred CCchHHHHHHHhhheeccceeeeEEEc-----CCH----HHHHHHHHHHHCCceEEecCcee---cchhHHHHHHHHHcC
Q 045248 163 PGPSAMLTFALKKLTFSKKQLVPLLLI-----PKR----ENLDFLVKLVKEGKLKTVINSKH---PLSKAEDAWAESIDG 230 (240)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~----~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~a~~~~~~~ 230 (240)
........+.......++.++.+.... .++ +.+..+++++..+++.+.....+ ++++++++++.+.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~ 331 (341)
T cd08290 252 GMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKG 331 (341)
T ss_pred ccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhc
Confidence 532222222232344566677766531 112 25888999999999987666667 999999999999998
Q ss_pred CCcccEEEeC
Q 045248 231 HATGKIIVEP 240 (240)
Q Consensus 231 ~~~gkvvl~~ 240 (240)
...||+|+++
T Consensus 332 ~~~~k~v~~~ 341 (341)
T cd08290 332 GGGGKQVLVM 341 (341)
T ss_pred CCCCeEEEeC
Confidence 8889999864
No 58
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.95 E-value=1.6e-27 Score=197.35 Aligned_cols=222 Identities=26% Similarity=0.346 Sum_probs=180.1
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|+.++++.++++|+++++.+++.++..+.|||+++.....+ .++++|+|+| +|++|++++++|+.+|
T Consensus 138 ~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~-----~~g~~VlI~g-~g~vG~~~~~lak~~G 211 (367)
T cd08263 138 SMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADV-----RPGETVAVIG-VGGVGSSAIQLAKAFG 211 (367)
T ss_pred cCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccC-----CCCCEEEEEC-CcHHHHHHHHHHHHcC
Confidence 369999999999999999999999999999999999999999777777 7899999996 8999999999999999
Q ss_pred CE-EEEEeCc-ccHHHHHhcCCCEEEeCCCCcc--ccccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCch
Q 045248 92 TH-VTASCGA-RNIEFVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 92 ~~-v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
++ |++++++ ++.+.++++|++.+++..+.+. ...+...+.++|+++|++|+. ....++++++++|+++.++....
T Consensus 212 ~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~ 291 (367)
T cd08263 212 ASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPG 291 (367)
T ss_pred CCeEEEEeCCHHHHHHHHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCC
Confidence 96 8888754 7888889999999998765542 223344567899999999987 78889999999999999985432
Q ss_pred H-HHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 167 A-MLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 167 ~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
. ...+....+..++.++.+++.....+.+++++++++++.+.+ .+++.++++++.++++.+.++...||+|++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 292 GATAEIPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CCccccCHHHHhhCCeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1 112222233345666666432223578999999999999886 367889999999999999999888999874
No 59
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.95 E-value=1.9e-27 Score=195.42 Aligned_cols=222 Identities=21% Similarity=0.257 Sum_probs=180.7
Q ss_pred cCCCcccceEEEecCC--ceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHH
Q 045248 10 SHNGGGLAEFAVAKES--STVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLA 87 (240)
Q Consensus 10 ~~~~G~~~e~~~v~~~--~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a 87 (240)
...+|+|++|+.+++. .++++|+++++++++.++..+.|||+++....++ .++++++|+| +|++|++++|+|
T Consensus 112 ~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~-----~~~~~vlV~g-~g~vg~~~~~~a 185 (345)
T cd08260 112 FTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARV-----KPGEWVAVHG-CGGVGLSAVMIA 185 (345)
T ss_pred cCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCC-----CCCCEEEEEC-CCHHHHHHHHHH
Confidence 3347999999999984 8999999999999999999999999999777777 7899999999 899999999999
Q ss_pred HhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC-Cc-cccc-cCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeC
Q 045248 88 KLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT-PD-GAAL-KSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 88 ~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~-~~-~~~~-~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g 162 (240)
+..|++|+++.++ ++.+.++++|++.+++..+ .+ ...+ +...+ ++|++||++|+ ..+...+++++++|+++.+|
T Consensus 186 ~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g 264 (345)
T cd08260 186 SALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG-GAHVSVDALGIPETCRNSVASLRKRGRHVQVG 264 (345)
T ss_pred HHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCC-CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeC
Confidence 9999999988864 7888889999999998776 33 2222 33334 89999999995 55788999999999999998
Q ss_pred CCchHH--HHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 163 PGPSAM--LTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 163 ~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
...... ..+....+..++.++.+... ...+.+++++++++++++.+ .+++.+++++++++++.+.++...||+|+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 343 (345)
T cd08260 265 LTLGEEAGVALPMDRVVARELEIVGSHG-MPAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVI 343 (345)
T ss_pred CcCCCCCccccCHHHHhhcccEEEeCCc-CCHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEe
Confidence 643221 22233334456667766543 45678999999999999875 36788999999999999999988999987
Q ss_pred e
Q 045248 239 E 239 (240)
Q Consensus 239 ~ 239 (240)
+
T Consensus 344 ~ 344 (345)
T cd08260 344 T 344 (345)
T ss_pred c
Confidence 5
No 60
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.95 E-value=2.3e-27 Score=194.40 Aligned_cols=220 Identities=23% Similarity=0.391 Sum_probs=177.0
Q ss_pred ccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHH
Q 045248 9 VSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 88 (240)
Q Consensus 9 ~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~ 88 (240)
+...+|+++||+.++.+.++++|++++++++++++..+.|||+++ ...++ +++++|||+| +|++|++++++|+
T Consensus 111 ~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~-----~~g~~vlV~g-~g~vG~~~~~la~ 183 (338)
T PRK09422 111 GYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGI-----KPGQWIAIYG-AGGLGNLALQYAK 183 (338)
T ss_pred CccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCC-----CCCCEEEEEC-CcHHHHHHHHHHH
Confidence 444579999999999999999999999999999999999999998 77777 8999999999 7999999999999
Q ss_pred h-CCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC-Cc-cccccCCCCCccc-EEEeCCCCCCccccccCCCCCcEEEEeCC
Q 045248 89 L-GNTHVTASCGA-RNIEFVKSLGADEVLDYKT-PD-GAALKSPSGRKYD-AVIHCATGIPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 89 ~-~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~-~~-~~~~~~~~~~~~d-~v~d~~g~~~~~~~~~~l~~~G~iv~~g~ 163 (240)
. .|++|++++++ ++.+.++++|++.++++.. .+ ...+....+ ++| +++++.++..+..++++++++|+++.+|.
T Consensus 184 ~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~ 262 (338)
T PRK09422 184 NVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGL 262 (338)
T ss_pred HhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEee
Confidence 8 59999999864 8899999999998888753 22 223332233 688 45555555668999999999999999985
Q ss_pred CchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 164 GPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
... ...+.......+..++.+++. ...+.++.++++++++++.+.++ .+++++++++|+.+.++...||++++
T Consensus 263 ~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~ 335 (338)
T PRK09422 263 PPE-SMDLSIPRLVLDGIEVVGSLV-GTRQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVID 335 (338)
T ss_pred CCC-CceecHHHHhhcCcEEEEecC-CCHHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEe
Confidence 432 122233444556667766542 46778999999999999876655 68999999999999999888999985
No 61
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.95 E-value=4.3e-27 Score=191.67 Aligned_cols=225 Identities=23% Similarity=0.264 Sum_probs=173.4
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCC-CCCeEEEEcCCchHHHHHHHHHHhC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSG-QQKNILVTAASGGVGHYAVQLAKLG 90 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~-~g~~vlV~G~~g~vG~~~~~~a~~~ 90 (240)
.+|+|++|+.++++.++++|+++++++++.+++.+.++|+++.......+ . .+++|+|+|++|++|++++|+|+.+
T Consensus 94 ~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~---~~~~~~vlI~g~~g~vg~~~~~~a~~~ 170 (325)
T cd05280 94 TDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQ---TPEDGPVLVTGATGGVGSIAVAILAKL 170 (325)
T ss_pred CCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccC---CCCCCEEEEECCccHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999999999999854432211 3 3579999998899999999999999
Q ss_pred CCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHHH
Q 045248 91 NTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAML 169 (240)
Q Consensus 91 g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~ 169 (240)
|++|++++++ ++.+.++++|++.+++..+......+...++++|+++|++|+..+..++++++++|+++.+|.......
T Consensus 171 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~ 250 (325)
T cd05280 171 GYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGPEL 250 (325)
T ss_pred CCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCCcc
Confidence 9999888864 788999999999888765432122233344679999999999889999999999999999986432211
Q ss_pred HHHHhhheeccceeeeEEEcC-C----HHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 170 TFALKKLTFSKKQLVPLLLIP-K----RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 170 ~~~~~~~~~~~~~i~~~~~~~-~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
......+..++.++.+..... . .+.++.+.+++..+ +.+.+..++++++++++++.+.+++..||+|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 251 TTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPD-LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred ccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcC-CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 223333445777777754421 1 23345555555666 4445778999999999999999999899999874
No 62
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.95 E-value=4.2e-27 Score=191.12 Aligned_cols=221 Identities=23% Similarity=0.208 Sum_probs=176.0
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
.+|+|++|+.+++..++++|+++++++++.++..+.|||+++.....+ .++++|+|+|++|++|++++|+|+.+|
T Consensus 93 ~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~-----~~g~~vlV~ga~g~~g~~~~~~a~~~g 167 (320)
T cd08243 93 FDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGL-----QPGDTLLIRGGTSSVGLAALKLAKALG 167 (320)
T ss_pred CCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCC-----CCCCEEEEEcCCChHHHHHHHHHHHcC
Confidence 359999999999999999999999999999999999999999777777 899999999988999999999999999
Q ss_pred CEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHHH-
Q 045248 92 THVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAML- 169 (240)
Q Consensus 92 ~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~- 169 (240)
++|++++++ ++.+.++++|++.+++........+... ++++|+++|++|+..+..++++++++|+++.+|.......
T Consensus 168 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~ 246 (320)
T cd08243 168 ATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQWTL 246 (320)
T ss_pred CEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHh-CCCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCccc
Confidence 999998864 7888899999988875422112223223 6789999999998778899999999999999986321110
Q ss_pred -HHHHhhh--eeccceeeeEEE-cCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 170 -TFALKKL--TFSKKQLVPLLL-IPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 170 -~~~~~~~--~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
....... ..++.++.+... ......++.++++++.+.+++.+++.++++++++|++.+.++...+|+|+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 247 EDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred CCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 0001111 134445555432 12245688899999999998877789999999999999998888889886
No 63
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.95 E-value=5.5e-27 Score=192.02 Aligned_cols=222 Identities=24% Similarity=0.343 Sum_probs=183.7
Q ss_pred cCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHh
Q 045248 10 SHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKL 89 (240)
Q Consensus 10 ~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~ 89 (240)
....|+|++|+.++.+.++++|++++++++++++..+.|||+++.....+ .++++|||.| +|++|++++++|+.
T Consensus 114 ~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~-----~~~~~vli~g-~g~vG~~~~~la~~ 187 (338)
T cd08254 114 LGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEV-----KPGETVLVIG-LGGLGLNAVQIAKA 187 (338)
T ss_pred cccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCC-----CCCCEEEEEC-CcHHHHHHHHHHHH
Confidence 33469999999999999999999999999999999999999999777777 8999999986 79999999999999
Q ss_pred CCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCcc-ccccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCch
Q 045248 90 GNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 90 ~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
.|++|++++++ ++.+.++++|.+.+++..+... ..++...+.++|+++|++|.. .+..++++++++|+++.+|....
T Consensus 188 ~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 267 (338)
T cd08254 188 MGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD 267 (338)
T ss_pred cCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC
Confidence 99999988864 7888889999988887665442 222445667899999999864 58889999999999999985432
Q ss_pred HHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 167 AMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
. ..+....+..++.++.+.+ ....+.+..++++++++.+.+. .+.+++++++++++.+.+++..||+|++|
T Consensus 268 ~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 268 K-LTVDLSDLIARELRIIGSF-GGTPEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred C-CccCHHHHhhCccEEEEec-cCCHHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 1 2223344556666777655 3567889999999999998876 67899999999999999999899999976
No 64
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.95 E-value=7.1e-27 Score=191.02 Aligned_cols=229 Identities=24% Similarity=0.332 Sum_probs=180.8
Q ss_pred eecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHH
Q 045248 6 RIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQ 85 (240)
Q Consensus 6 ~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~ 85 (240)
++.+...+|+|++|+.++.+.++++|+++++.+++.++..+.+||+++.....+ .++++|+|+|++|++|+++++
T Consensus 85 ~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~-----~~~~~vlI~ga~g~~g~~~~~ 159 (334)
T PTZ00354 85 RVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDV-----KKGQSVLIHAGASGVGTAAAQ 159 (334)
T ss_pred EEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCEEEEEcCCchHHHHHHH
Confidence 333433469999999999999999999999999999999999999999777777 899999999999999999999
Q ss_pred HHHhCCCEEEEEeC-cccHHHHHhcCCCEEEeCCCCc--c-ccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEe
Q 045248 86 LAKLGNTHVTASCG-ARNIEFVKSLGADEVLDYKTPD--G-AALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 86 ~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~--~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~ 161 (240)
+|+.+|++++.+.+ +++.+.++++|++.+++....+ . ...+.+.+.++|+++|++|+..+..++++++++|+++.+
T Consensus 160 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~ 239 (334)
T PTZ00354 160 LAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVY 239 (334)
T ss_pred HHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEE
Confidence 99999998777665 4788888999998888765533 1 223445567899999999988888999999999999998
Q ss_pred CCCchHHHH-HHHhhheeccceeeeEEEcCC---------HHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCC
Q 045248 162 TPGPSAMLT-FALKKLTFSKKQLVPLLLIPK---------RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGH 231 (240)
Q Consensus 162 g~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~ 231 (240)
+........ +....+..++.++.+...... .+.+++++++++++.+.+.+.+.+++++++++++.+.++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 319 (334)
T PTZ00354 240 GFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNK 319 (334)
T ss_pred ecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCC
Confidence 854322211 222223334445655443110 1345778899999999887788999999999999999888
Q ss_pred CcccEEEe
Q 045248 232 ATGKIIVE 239 (240)
Q Consensus 232 ~~gkvvl~ 239 (240)
..+|+|++
T Consensus 320 ~~~kvvv~ 327 (334)
T PTZ00354 320 NIGKVVLT 327 (334)
T ss_pred CCceEEEe
Confidence 78899985
No 65
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=9.4e-27 Score=190.37 Aligned_cols=225 Identities=28% Similarity=0.389 Sum_probs=186.6
Q ss_pred ccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHH
Q 045248 9 VSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 88 (240)
Q Consensus 9 ~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~ 88 (240)
+...+|+|++|+.++++.++++|+++++.+++.++..+.+||+++.....+ +++++++|+| +|++|++++++++
T Consensus 108 ~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~-----~~g~~vli~g-~g~~g~~~~~~a~ 181 (336)
T cd08276 108 GGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPL-----KPGDTVLVQG-TGGVSLFALQFAK 181 (336)
T ss_pred ccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCC-----CCCCEEEEEC-CcHHHHHHHHHHH
Confidence 333478999999999999999999999999999999999999999777777 8999999996 8999999999999
Q ss_pred hCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC-Cc-cc-cccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 89 LGNTHVTASCGA-RNIEFVKSLGADEVLDYKT-PD-GA-ALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 89 ~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~-~~-~~-~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
+.|++|++++++ ++.+.++++|.+.+++... .+ .. ..+.+.++++|.++|++|+..+..++++++++|+++.+|..
T Consensus 182 ~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~ 261 (336)
T cd08276 182 AAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFL 261 (336)
T ss_pred HcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccC
Confidence 999999998865 7888888899998888665 33 22 23445667899999999987788999999999999999864
Q ss_pred chHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 165 PSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
..............++.++.+... ...+.+++++++++++.+.+..+..+++++++++++.+.++...+|++++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 262 SGFEAPVLLLPLLTKGATLRGIAV-GSRAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred CCCccCcCHHHHhhcceEEEEEec-CcHHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 332222233344567777777664 457789999999999988877778999999999999999888888999863
No 66
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.95 E-value=9.2e-27 Score=190.67 Aligned_cols=223 Identities=25% Similarity=0.358 Sum_probs=171.6
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCC-----CCeEEEEcCCchHHHHHHHH
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQ-----QKNILVTAASGGVGHYAVQL 86 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~-----g~~vlV~G~~g~vG~~~~~~ 86 (240)
..|+|++|++++++.++++|+++++++++.+++++.|||+++....++ .+ +++|||+|++|++|++++|+
T Consensus 94 ~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~-----~~~~~~~g~~vlV~ga~g~vg~~~~~~ 168 (336)
T TIGR02817 94 RPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGI-----NDPVAGDKRALLIIGGAGGVGSILIQL 168 (336)
T ss_pred CCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCC-----CCCCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 369999999999999999999999999999999999999999777777 55 99999999999999999999
Q ss_pred HHhC-CCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCC
Q 045248 87 AKLG-NTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 87 a~~~-g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~ 163 (240)
|+.+ |++|++++++ ++.+.++++|+++++++.......+....++++|+++|++++ .....++++++++|+++.++.
T Consensus 169 ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~ 248 (336)
T TIGR02817 169 ARQLTGLTVIATASRPESQEWVLELGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDD 248 (336)
T ss_pred HHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCCCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcc
Confidence 9998 9999999864 788999999999999865422233333455689999999865 668899999999999998864
Q ss_pred CchHHHH-HHHhhheeccceee-eEEE-cC----CHHHHHHHHHHHHCCceEEecCceec---chhHHHHHHHHHcCCCc
Q 045248 164 GPSAMLT-FALKKLTFSKKQLV-PLLL-IP----KRENLDFLVKLVKEGKLKTVINSKHP---LSKAEDAWAESIDGHAT 233 (240)
Q Consensus 164 ~~~~~~~-~~~~~~~~~~~~i~-~~~~-~~----~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~a~~~~~~~~~~ 233 (240)
....... +..+.+.+....+. .... .+ ....++++++++.++.+++.+++.++ ++++++|++.+.+++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 328 (336)
T TIGR02817 249 PAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKAR 328 (336)
T ss_pred cccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCcc
Confidence 3211111 11121222221111 0000 01 12457899999999999887666664 68999999999999888
Q ss_pred ccEEEe
Q 045248 234 GKIIVE 239 (240)
Q Consensus 234 gkvvl~ 239 (240)
||+|+.
T Consensus 329 gkvvv~ 334 (336)
T TIGR02817 329 GKIVLE 334 (336)
T ss_pred ceEEEe
Confidence 999874
No 67
>PRK10083 putative oxidoreductase; Provisional
Probab=99.95 E-value=6.3e-27 Score=191.90 Aligned_cols=220 Identities=17% Similarity=0.182 Sum_probs=170.0
Q ss_pred ccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHH
Q 045248 9 VSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 88 (240)
Q Consensus 9 ~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~ 88 (240)
+...+|+|+||+.++...++++|+++++++++ +...+.+++++. ...++ +++++|+|+| +|++|++++|+|+
T Consensus 110 ~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~-~~~~~-----~~g~~vlI~g-~g~vG~~~~~~a~ 181 (339)
T PRK10083 110 GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVT-GRTGP-----TEQDVALIYG-AGPVGLTIVQVLK 181 (339)
T ss_pred EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHH
Confidence 44457999999999999999999999998876 445567788655 67777 8999999999 8999999999999
Q ss_pred h-CCCE-EEEEeC-cccHHHHHhcCCCEEEeCCCCc-cccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCC
Q 045248 89 L-GNTH-VTASCG-ARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 89 ~-~g~~-v~~~~~-~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~ 163 (240)
. +|++ ++++++ +++.+.++++|++.++++.+.+ ...+.. .+.++|++||++|. ..+..++++++++|+++.+|.
T Consensus 182 ~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~-~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 260 (339)
T PRK10083 182 GVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEE-KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGF 260 (339)
T ss_pred HhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhc-CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcc
Confidence 6 6995 666665 4788999999999999876543 222221 23356799999996 458899999999999999986
Q ss_pred CchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCC-CcccEEEeC
Q 045248 164 GPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGH-ATGKIIVEP 240 (240)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~-~~gkvvl~~ 240 (240)
... ........+..++.++.+.. ...+.+++++++++++++.+ ++++.|+++++++|++.+.++. ..+|+|+++
T Consensus 261 ~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 261 SSE-PSEIVQQGITGKELSIFSSR--LNANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred CCC-CceecHHHHhhcceEEEEEe--cChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence 532 11122223334566666654 35678999999999999986 4778999999999999998653 568999864
No 68
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.95 E-value=7.1e-27 Score=190.85 Aligned_cols=228 Identities=28% Similarity=0.339 Sum_probs=180.9
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHH
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGH 81 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~ 81 (240)
|++....+....|+|++|++++...++++|++++++++++++..+.+||+++.. ..+ .++++++|+|++|++|+
T Consensus 104 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~-----~~~~~vlI~ga~g~vG~ 177 (332)
T cd08259 104 CRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGV-----KKGDTVLVTGAGGGVGI 177 (332)
T ss_pred CCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCC-----CCCCEEEEECCCCHHHH
Confidence 433333344457999999999999999999999999999999999999999965 777 78999999999999999
Q ss_pred HHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEE
Q 045248 82 YAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVID 160 (240)
Q Consensus 82 ~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~ 160 (240)
+++++++..|++|++++++ ++.+.++++|.+.+++..+ ....+... .++|++++++|......++++++++|+++.
T Consensus 178 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~ 254 (332)
T cd08259 178 HAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK-FSEDVKKL--GGADVVIELVGSPTIEESLRSLNKGGRLVL 254 (332)
T ss_pred HHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH-HHHHHHhc--cCCCEEEECCChHHHHHHHHHhhcCCEEEE
Confidence 9999999999999988864 7788888889887776543 21222222 279999999998778889999999999999
Q ss_pred eCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 161 ITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
++...............+++.++.+.. ....+.+++++++++++.+++.+++.++++++++|++.+.++...||+|++
T Consensus 255 ~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 255 IGNVTPDPAPLRPGLLILKEIRIIGSI-SATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred EcCCCCCCcCCCHHHHHhCCcEEEEec-CCCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 985432211111112224555555554 356788999999999999988888899999999999999998888999874
No 69
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.95 E-value=1.1e-26 Score=189.25 Aligned_cols=222 Identities=23% Similarity=0.333 Sum_probs=171.9
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhh--hCCCcCCCCCCC-eEEEEcCCchHHHHHHHHHH
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQS--AGVKLDGSGQQK-NILVTAASGGVGHYAVQLAK 88 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~~~g~-~vlV~G~~g~vG~~~~~~a~ 88 (240)
.+|+|++|+.++++.++++|+++++++++.++..+.+++.++... .++ .+++ +|+|+|++|++|.+++++|+
T Consensus 93 ~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~-----~~~~~~vlI~g~~g~vg~~~~~la~ 167 (323)
T TIGR02823 93 HDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGL-----TPEDGPVLVTGATGGVGSLAVAILS 167 (323)
T ss_pred CCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCC-----CCCCceEEEEcCCcHHHHHHHHHHH
Confidence 479999999999999999999999999999999999998887433 235 6888 99999988999999999999
Q ss_pred hCCCEEEEEeC-cccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchH
Q 045248 89 LGNTHVTASCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSA 167 (240)
Q Consensus 89 ~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~ 167 (240)
.+|++++++++ +++.+.++++|++.+++..+.+. .+....+.++|+++|++|++.+..++++++++|+++.+|.....
T Consensus 168 ~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 246 (323)
T TIGR02823 168 KLGYEVVASTGKAEEEDYLKELGASEVIDREDLSP-PGKPLEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGGP 246 (323)
T ss_pred HcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHH-HHHHhcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCCC
Confidence 99999888775 47778899999988887654322 22222233599999999988888999999999999999864322
Q ss_pred HHHHHHhhheeccceeeeEEEc--C---CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 168 MLTFALKKLTFSKKQLVPLLLI--P---KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 168 ~~~~~~~~~~~~~~~i~~~~~~--~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
..+.....+..++.++.+.... . ..+.+..+.+++..+.+.+. .+.++++++++||+.+.+++..||+|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 247 DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 2222222333556666665431 1 12346677777778887654 45899999999999999999899999864
No 70
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.95 E-value=1.1e-26 Score=192.17 Aligned_cols=217 Identities=17% Similarity=0.169 Sum_probs=175.9
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|++|+.++++.++++|++++++++++++.++.+||+++....++ +++++|||+| +|++|++++++|+.+|+
T Consensus 135 ~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~-----~~g~~vlI~g-~g~vG~~a~~~a~~~G~ 208 (365)
T cd05279 135 TSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKV-----TPGSTCAVFG-LGGVGLSVIMGCKAAGA 208 (365)
T ss_pred cccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 47999999999999999999999999999998999999998788888 8999999997 79999999999999999
Q ss_pred E-EEEEeC-cccHHHHHhcCCCEEEeCCCC--c-cccc-cCCCCCcccEEEeCCCC-CCccccccCCC-CCcEEEEeCCC
Q 045248 93 H-VTASCG-ARNIEFVKSLGADEVLDYKTP--D-GAAL-KSPSGRKYDAVIHCATG-IPWSTFEPNLG-TNGKVIDITPG 164 (240)
Q Consensus 93 ~-v~~~~~-~~~~~~~~~~g~~~v~~~~~~--~-~~~~-~~~~~~~~d~v~d~~g~-~~~~~~~~~l~-~~G~iv~~g~~ 164 (240)
+ |+++.+ +++.+.++++|++.+++..+. + ...+ +.+ ++++|+++|++|. ..+..++++++ ++|+++.+|..
T Consensus 209 ~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 287 (365)
T cd05279 209 SRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMT-DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVP 287 (365)
T ss_pred CeEEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHh-CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecC
Confidence 4 677774 578899999999999887655 3 1222 333 4689999999986 55888999999 99999998854
Q ss_pred c-hHHHHHHHhhheeccceeeeEEEc--CCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 165 P-SAMLTFALKKLTFSKKQLVPLLLI--PKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 165 ~-~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
. ....++....+ .++.++.+.+.. ...+.+.+++++++++.+.+ .++++++++++++||+.+.+++.. |+++
T Consensus 288 ~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 288 PSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred CCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 3 22233344444 566777776542 45678999999999999874 577889999999999998877654 6665
No 71
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=2.4e-28 Score=213.13 Aligned_cols=230 Identities=23% Similarity=0.254 Sum_probs=191.3
Q ss_pred ceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHH
Q 045248 5 WRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAV 84 (240)
Q Consensus 5 ~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~ 84 (240)
.++++.-..-++++.+.++.+++|.+|.+..++||++.|+.|.|+|+++..+..+ ++|+++||++|+||+|++++
T Consensus 1496 rRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~m-----kkGekiLIHaGsGGVGQAAI 1570 (2376)
T KOG1202|consen 1496 RRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQM-----KKGEKILIHAGSGGVGQAAI 1570 (2376)
T ss_pred cEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccc-----cCCcEEEEecCCCchhHHHH
Confidence 4555665567889999999999999999999999999999999999999999988 99999999999999999999
Q ss_pred HHHHhCCCEEEEEeCc-ccHHHHHh----cCCCEEEeCCCCccc--cccCCCCCcccEEEeCCCCCCccccccCCCCCcE
Q 045248 85 QLAKLGNTHVTASCGA-RNIEFVKS----LGADEVLDYKTPDGA--ALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGK 157 (240)
Q Consensus 85 ~~a~~~g~~v~~~~~~-~~~~~~~~----~g~~~v~~~~~~~~~--~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~ 157 (240)
.+|-++|++|+.++.+ ++++++.+ +...++-|.++.++. ++..+.++|+|+|+++...+-++.+++||+.+|+
T Consensus 1571 aiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GR 1650 (2376)
T KOG1202|consen 1571 AIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGR 1650 (2376)
T ss_pred HHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCe
Confidence 9999999999999975 88888853 334566666666643 4578899999999999999889999999999999
Q ss_pred EEEeCCC-----chHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCC----ceEEecCceecchhHHHHHHHHH
Q 045248 158 VIDITPG-----PSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEG----KLKTVINSKHPLSKAEDAWAESI 228 (240)
Q Consensus 158 iv~~g~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~a~~~~~ 228 (240)
+..+|.- ...-++.+.++.+++++-+..+. ....+++.++..++++| -++|+.+++|+-.++++||+.|.
T Consensus 1651 FLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvm-ege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMa 1729 (2376)
T KOG1202|consen 1651 FLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVM-EGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMA 1729 (2376)
T ss_pred eeeecceecccCCcchhhhhhcccceeeeehhhhh-cCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHh
Confidence 9999842 22234445555555554443332 46778888888888876 47899999999999999999999
Q ss_pred cCCCcccEEEeC
Q 045248 229 DGHATGKIIVEP 240 (240)
Q Consensus 229 ~~~~~gkvvl~~ 240 (240)
+|+.+||||+++
T Consensus 1730 sGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1730 SGKHIGKVVIKV 1741 (2376)
T ss_pred ccCccceEEEEE
Confidence 999999999863
No 72
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.95 E-value=2.5e-26 Score=188.13 Aligned_cols=233 Identities=28% Similarity=0.429 Sum_probs=187.1
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHH
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGH 81 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~ 81 (240)
|..+.+.+....|++++|+.++++.++++|+++++++++.++..+.++++++.+...+ .++++++|+|+++++|+
T Consensus 107 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~-----~~~~~vlI~g~~~~iG~ 181 (342)
T cd08266 107 CAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARL-----RPGETVLVHGAGSGVGS 181 (342)
T ss_pred cccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCC-----CCCCEEEEECCCchHHH
Confidence 4444444555679999999999999999999999999999999999999998777777 89999999998889999
Q ss_pred HHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCc--cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEE
Q 045248 82 YAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKV 158 (240)
Q Consensus 82 ~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~i 158 (240)
+++++++..|++|+.++++ ++.+.+++.+.+.+++..+.+ ....+...+.++|+++|++|...+...+++++++|++
T Consensus 182 ~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~ 261 (342)
T cd08266 182 AAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRL 261 (342)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEE
Confidence 9999999999999888865 677888888887777655433 1222334456899999999987788899999999999
Q ss_pred EEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 159 IDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 159 v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
+.++................++.++.+... .....+.+++++++++.+++.+++.|++++++++++.+.++...+|+|+
T Consensus 262 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 340 (342)
T cd08266 262 VTCGATTGYEAPIDLRHVFWRQLSILGSTM-GTKAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVL 340 (342)
T ss_pred EEEecCCCCCCCcCHHHHhhcceEEEEEec-CCHHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEE
Confidence 999854332222222233455666666553 4667889999999999998888889999999999999998888899998
Q ss_pred eC
Q 045248 239 EP 240 (240)
Q Consensus 239 ~~ 240 (240)
++
T Consensus 341 ~~ 342 (342)
T cd08266 341 TP 342 (342)
T ss_pred eC
Confidence 74
No 73
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.95 E-value=1.9e-26 Score=189.39 Aligned_cols=220 Identities=22% Similarity=0.303 Sum_probs=176.7
Q ss_pred cCCCcccceEEEecCCc-----eeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHH
Q 045248 10 SHNGGGLAEFAVAKESS-----TVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAV 84 (240)
Q Consensus 10 ~~~~G~~~e~~~v~~~~-----~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~ 84 (240)
....|+|++|+.++++. ++++|+++++++++.+ ..+.+||+++ ...++ +++++|+|+| +|++|++++
T Consensus 111 ~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~-----~~g~~VlV~g-~g~vg~~~~ 182 (343)
T cd08235 111 NLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQ-RKAGI-----KPGDTVLVIG-AGPIGLLHA 182 (343)
T ss_pred cCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHH
Confidence 33579999999999998 9999999999999776 6778999999 44577 8999999997 799999999
Q ss_pred HHHHhCCCE-EEEEeC-cccHHHHHhcCCCEEEeCCCCcc--ccccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEE
Q 045248 85 QLAKLGNTH-VTASCG-ARNIEFVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVI 159 (240)
Q Consensus 85 ~~a~~~g~~-v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv 159 (240)
|+|+..|++ |+++.+ +++.+.++++|.+.++++.+.+. ...+...+.++|+++|++|+. .+..++++++++|+++
T Consensus 183 ~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v 262 (343)
T cd08235 183 MLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRIL 262 (343)
T ss_pred HHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence 999999998 888775 47788888999988888776542 223345567799999999975 5788899999999999
Q ss_pred EeCCCchH-HHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHcCCCcccE
Q 045248 160 DITPGPSA-MLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESIDGHATGKI 236 (240)
Q Consensus 160 ~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkv 236 (240)
.++..... ..........+++.++.+.. ....+.+++++++++++.+. +.+...+++++++++++.+.+++ .+|+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~ 340 (343)
T cd08235 263 FFGGLPKGSTVNIDPNLIHYREITITGSY-AASPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKI 340 (343)
T ss_pred EEeccCCCCCcccCHHHHhhCceEEEEEe-cCChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEE
Confidence 98853321 12222344556777777655 35667899999999999986 34567899999999999999998 8999
Q ss_pred EEe
Q 045248 237 IVE 239 (240)
Q Consensus 237 vl~ 239 (240)
|++
T Consensus 341 vi~ 343 (343)
T cd08235 341 VIT 343 (343)
T ss_pred EeC
Confidence 874
No 74
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.95 E-value=1.5e-26 Score=189.92 Aligned_cols=217 Identities=22% Similarity=0.306 Sum_probs=174.2
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|++++++.++++|+++++++++++ ..+.+|++++ ....+ +++++++|+| +|++|++++|+|+.+|
T Consensus 115 ~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~-----~~g~~vlI~g-~g~vG~~a~~lak~~G 186 (343)
T cd05285 115 VDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGV-----RPGDTVLVFG-AGPIGLLTAAVAKAFG 186 (343)
T ss_pred CCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 4699999999999999999999999999876 4667899987 77888 8999999987 7999999999999999
Q ss_pred CE-EEEEeC-cccHHHHHhcCCCEEEeCCCCcc----c-cccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCC
Q 045248 92 TH-VTASCG-ARNIEFVKSLGADEVLDYKTPDG----A-ALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 92 ~~-v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~----~-~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~ 163 (240)
++ |+++.+ +++.+.++++|++.+++..+.+. . ..+.+.+.++|+++||+|+. .+...+++++++|+++.+|.
T Consensus 187 ~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T cd05285 187 ATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGM 266 (343)
T ss_pred CcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcc
Confidence 96 888876 47888889999999988765432 1 23445667899999999986 68889999999999999985
Q ss_pred CchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHcCC-CcccEEEe
Q 045248 164 GPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESIDGH-ATGKIIVE 239 (240)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvl~ 239 (240)
.... ...+...+.+++.++.+... ..+.+++++++++++.+. +.+.+.++++++.+|++.+.++. ..+|+++.
T Consensus 267 ~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 267 GKPE-VTLPLSAASLREIDIRGVFR--YANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred CCCC-CccCHHHHhhCCcEEEEecc--ChHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEEe
Confidence 4321 22222345567777776542 347789999999999865 45667899999999999999874 45899873
No 75
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.95 E-value=1.7e-26 Score=192.28 Aligned_cols=228 Identities=20% Similarity=0.242 Sum_probs=175.6
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCC-------ChhhhhhhchHHHHHHHHHHhh-hCCCcCCCCCCCeEEEE
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEV-------SAAEGSGLPVAGLTAHQALTQS-AGVKLDGSGQQKNILVT 73 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~-------~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~~~g~~vlV~ 73 (240)
|..+...+...+|+|++|+.++++.++++|+++ +++ +++++..+.+||+++... .++ ++|++|+|+
T Consensus 137 ~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~-----~~g~~VlV~ 210 (384)
T cd08265 137 CKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGF-----RPGAYVVVY 210 (384)
T ss_pred CCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCC-----CCCCEEEEE
Confidence 444444445558999999999999999999864 444 566667778999998655 577 899999999
Q ss_pred cCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHHHhcCCCEEEeCCCC---c--cccccCCCCCcccEEEeCCCCC--C
Q 045248 74 AASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFVKSLGADEVLDYKTP---D--GAALKSPSGRKYDAVIHCATGI--P 144 (240)
Q Consensus 74 G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~v~~~~~~---~--~~~~~~~~~~~~d~v~d~~g~~--~ 144 (240)
| +|++|++++|+|+.+|+ +|++++++ ++.+.++++|++.++++.+. + ....+.+.++++|+++|++|+. .
T Consensus 211 g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~ 289 (384)
T cd08265 211 G-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPAT 289 (384)
T ss_pred C-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHH
Confidence 6 79999999999999999 79988864 78888899999998876643 2 2233456677899999999964 4
Q ss_pred ccccccCCCCCcEEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHH
Q 045248 145 WSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAED 222 (240)
Q Consensus 145 ~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~ 222 (240)
+..++++|+++|+++.+|.... ...+....+.++..++.+.........+++++++++++.+.+ ++++.|+++++++
T Consensus 290 ~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~ 368 (384)
T cd08265 290 IPQMEKSIAINGKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIME 368 (384)
T ss_pred HHHHHHHHHcCCEEEEECCCCC-CCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHH
Confidence 7788999999999999985432 122223344555667777653234557999999999999875 3667899999999
Q ss_pred HHHHHHcCCCcccEEE
Q 045248 223 AWAESIDGHATGKIIV 238 (240)
Q Consensus 223 a~~~~~~~~~~gkvvl 238 (240)
|++.+.++ ..+|+|+
T Consensus 369 a~~~~~~~-~~~kvvv 383 (384)
T cd08265 369 AIKAASER-TDGKITI 383 (384)
T ss_pred HHHHHhcC-CCceEEe
Confidence 99997665 4788875
No 76
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.95 E-value=1.9e-26 Score=188.16 Aligned_cols=222 Identities=21% Similarity=0.274 Sum_probs=175.4
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|+.++++.++++|+++++++++.++..+.++|.++.....+ .++++++|+|++|.+|++++|+++.+|
T Consensus 91 ~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~-----~~g~~vlI~g~~g~ig~~~~~lak~~G 165 (327)
T PRK10754 91 ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEI-----KPDEQFLFHAAAGGVGLIACQWAKALG 165 (327)
T ss_pred CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCC-----CCCCEEEEEeCCcHHHHHHHHHHHHcC
Confidence 458999999999999999999999999999988989999998777777 899999999989999999999999999
Q ss_pred CEEEEEeCc-ccHHHHHhcCCCEEEeCCCCcc--ccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHH
Q 045248 92 THVTASCGA-RNIEFVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAM 168 (240)
Q Consensus 92 ~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~ 168 (240)
++|+++++. ++.+.++++|++.+++....+. ...+.+.+.++|+++|++|+......+++++++|+++.+|......
T Consensus 166 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~ 245 (327)
T PRK10754 166 AKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGPV 245 (327)
T ss_pred CEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCCC
Confidence 999988864 7888889999988887665442 2334566678999999999877888999999999999998543211
Q ss_pred HHHHHhh------heeccceeeeEEEcCCH----HHHHHHHHHHHCCceEEe--cCceecchhHHHHHHHHHcCCCcccE
Q 045248 169 LTFALKK------LTFSKKQLVPLLLIPKR----ENLDFLVKLVKEGKLKTV--INSKHPLSKAEDAWAESIDGHATGKI 236 (240)
Q Consensus 169 ~~~~~~~------~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkv 236 (240)
....... .......+.+.. .+. +.+.++++++.+|++++. .++.|++++++++++.+.++...+|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 323 (327)
T PRK10754 246 TGVNLGILNQKGSLYVTRPSLQGYI--TTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSS 323 (327)
T ss_pred CCcCHHHHhccCceEEecceeeccc--CCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceE
Confidence 1111111 111122222222 222 345678999999999853 56899999999999999999989999
Q ss_pred EEeC
Q 045248 237 IVEP 240 (240)
Q Consensus 237 vl~~ 240 (240)
|+.+
T Consensus 324 ~~~~ 327 (327)
T PRK10754 324 LLIP 327 (327)
T ss_pred EEeC
Confidence 9864
No 77
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.95 E-value=3.9e-26 Score=185.70 Aligned_cols=208 Identities=17% Similarity=0.230 Sum_probs=168.3
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
.+|+|++|++++++.++++|++++.++++++ ....+++.++ +..++ +++++|+|+| +|++|++++|+|+.+|
T Consensus 108 ~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~-~~~~~-----~~g~~vlV~g-~g~vg~~~~q~a~~~G 179 (319)
T cd08242 108 RDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL-EQVPI-----TPGDKVAVLG-DGKLGLLIAQVLALTG 179 (319)
T ss_pred CCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 4799999999999999999999999988864 3334677666 67777 8999999998 8999999999999999
Q ss_pred CEEEEEeC-cccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCchHHH
Q 045248 92 THVTASCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGPSAML 169 (240)
Q Consensus 92 ~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~ 169 (240)
++|+++++ +++.+.++++|++.++++.+. +.+.++|+++|++|+. .+..++++++++|+++..+.... ..
T Consensus 180 ~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~-~~ 251 (319)
T cd08242 180 PDVVLVGRHSEKLALARRLGVETVLPDEAE-------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG-PA 251 (319)
T ss_pred CeEEEEcCCHHHHHHHHHcCCcEEeCcccc-------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-CC
Confidence 99988886 488999999999887766432 3556899999999874 58888999999999998765332 12
Q ss_pred HHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCce--EEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 170 TFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKL--KTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 170 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
.+....+.+++.++.+.... .+++++++++++++ .+.+++.|+++++++||+.+.++. .+|+|+++
T Consensus 252 ~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 252 SFDLTKAVVNEITLVGSRCG----PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred ccCHHHheecceEEEEEecc----cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 33344566777777776431 28889999999998 456788999999999999998776 58999875
No 78
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.95 E-value=4.8e-26 Score=185.91 Aligned_cols=219 Identities=23% Similarity=0.276 Sum_probs=177.5
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHH
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGH 81 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~ 81 (240)
|+.+.+.+...+|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++ ..+++ +++++++|+| +|++|+
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~-----~~~~~vlV~g-~g~vg~ 181 (329)
T cd08298 109 CDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGL-----KPGQRLGLYG-FGASAH 181 (329)
T ss_pred CCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCC-----CCCCEEEEEC-CcHHHH
Confidence 5555555555679999999999999999999999999999999999999999 88888 8999999998 899999
Q ss_pred HHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEE
Q 045248 82 YAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVI 159 (240)
Q Consensus 82 ~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv 159 (240)
+++++++..|++|++++++ ++.+.++++|++.+++.... .++++|+++++.+. ..+..++++++++|+++
T Consensus 182 ~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v 253 (329)
T cd08298 182 LALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL--------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVV 253 (329)
T ss_pred HHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc--------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEE
Confidence 9999999999999999864 78899999999877765432 23579999998764 45889999999999999
Q ss_pred EeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 160 DITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 160 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
.+|.........+... ...+..+.+.. ....+.+++++++++++.+++. +++++++++++|++.+.++...||+|+
T Consensus 254 ~~g~~~~~~~~~~~~~-~~~~~~i~~~~-~~~~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 254 LAGIHMSDIPAFDYEL-LWGEKTIRSVA-NLTRQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred EEcCCCCCCCccchhh-hhCceEEEEec-CCCHHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 9885322111111111 23455566654 3467788999999999998874 578999999999999999988899874
No 79
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.94 E-value=4e-26 Score=188.84 Aligned_cols=218 Identities=22% Similarity=0.227 Sum_probs=174.4
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|++|+.++++.++++|+++++++++.+++++.||+.++.....+ +++++|||+| +|++|++++|+|++.|+
T Consensus 138 ~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~-----~~g~~vlI~g-~g~vG~~~~~la~~~G~ 211 (365)
T cd08278 138 QSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKP-----RPGSSIAVFG-AGAVGLAAVMAAKIAGC 211 (365)
T ss_pred ccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 58999999999999999999999999999999999999998777777 8999999997 79999999999999999
Q ss_pred -EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cc-cccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCc-h
Q 045248 93 -HVTASCGA-RNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGP-S 166 (240)
Q Consensus 93 -~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~-~ 166 (240)
++++++++ ++.+.++++|++.++++.+.+ .. ..+.+ +.++|+++|++|+ ..+..++++++++|+++.+|... .
T Consensus 212 ~~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~ 290 (365)
T cd08278 212 TTIIAVDIVDSRLELAKELGATHVINPKEEDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPG 290 (365)
T ss_pred CeEEEEeCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCC
Confidence 67877754 788888999999998876654 22 23334 6789999999996 45889999999999999998642 1
Q ss_pred HHHHHHHhhheeccceeeeEEEc--CCHHHHHHHHHHHHCCceEE-ecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 167 AMLTFALKKLTFSKKQLVPLLLI--PKRENLDFLVKLVKEGKLKT-VINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
....++...+..++.++.++... ...+.+++++++++++++.. .+...++++++++|++.+.++... |+|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~ 364 (365)
T cd08278 291 AEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVL 364 (365)
T ss_pred CccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEE
Confidence 12233333343566666665431 12467788999999999854 244589999999999999887754 7776
No 80
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.94 E-value=4.8e-26 Score=187.50 Aligned_cols=216 Identities=16% Similarity=0.218 Sum_probs=171.6
Q ss_pred CCcccceEEEecCC-ceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhC
Q 045248 12 NGGGLAEFAVAKES-STVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLG 90 (240)
Q Consensus 12 ~~G~~~e~~~v~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~ 90 (240)
..|+|+||+.++++ .++++|+++++++++++ ..+.|+|+++ ...++ .++++|+|.| +|++|++++++|+.+
T Consensus 126 ~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~-----~~g~~vlI~g-~g~vG~~~~~~a~~~ 197 (350)
T cd08256 126 VNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANI-----KFDDVVVLAG-AGPLGLGMIGAARLK 197 (350)
T ss_pred CCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHc
Confidence 46999999999988 57899999999999988 7778999998 77788 8999999955 899999999999999
Q ss_pred CCE-EEEEeCc-ccHHHHHhcCCCEEEeCCCCc--cccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCc
Q 045248 91 NTH-VTASCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 91 g~~-v~~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~ 165 (240)
|++ ++++.++ ++.+.++++|++.+++....+ ....+.+.+.++|+++|++|+ ..+..++++++++|+++.+|...
T Consensus 198 G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 277 (350)
T cd08256 198 NPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFG 277 (350)
T ss_pred CCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCC
Confidence 984 5666654 778888999999888776544 223344566789999999996 45788999999999999998543
Q ss_pred hHHHHHHHhhh-eeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 166 SAMLTFALKKL-TFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 166 ~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
.. .++....+ ..++.++.++.. ....+.+++++++++.+++ .+++.++++++++|++.+.++...+|+|+
T Consensus 278 ~~-~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 278 DP-VTVDWSIIGDRKELDVLGSHL--GPYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred CC-CccChhHhhcccccEEEEecc--CchhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 21 11222222 245566766542 3457889999999999986 36789999999999999999888888874
No 81
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.94 E-value=3.4e-26 Score=190.51 Aligned_cols=220 Identities=21% Similarity=0.202 Sum_probs=175.3
Q ss_pred CcccceEEEecCC--ceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhC
Q 045248 13 GGGLAEFAVAKES--STVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLG 90 (240)
Q Consensus 13 ~G~~~e~~~v~~~--~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~ 90 (240)
+|+|+||++++++ .++++|++++++++++++..+.|||+++ ....+ .++++|+|+| +|++|++++++|+.+
T Consensus 135 ~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~-----~~g~~VlV~g-~G~vG~~~~~la~~~ 207 (386)
T cd08283 135 AGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEV-----KPGDTVAVWG-CGPVGLFAARSAKLL 207 (386)
T ss_pred CCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccC-----CCCCEEEEEC-CCHHHHHHHHHHHHc
Confidence 6999999999988 8999999999999999999999999999 77877 8999999997 799999999999999
Q ss_pred CC-EEEEEeC-cccHHHHHhcCCCEEEeCCCCc--cc-cccCCCCCcccEEEeCCCCC----------------------
Q 045248 91 NT-HVTASCG-ARNIEFVKSLGADEVLDYKTPD--GA-ALKSPSGRKYDAVIHCATGI---------------------- 143 (240)
Q Consensus 91 g~-~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~--~~-~~~~~~~~~~d~v~d~~g~~---------------------- 143 (240)
|+ +|+++++ +++.+.+++++...++++...+ .. ....+.++++|++||++|++
T Consensus 208 g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~ 287 (386)
T cd08283 208 GAERVIAIDRVPERLEMARSHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPD 287 (386)
T ss_pred CCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchH
Confidence 98 6988886 4788999988544677766542 22 22445556899999999853
Q ss_pred CccccccCCCCCcEEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHH
Q 045248 144 PWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAE 221 (240)
Q Consensus 144 ~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~ 221 (240)
.+..++++++++|+++.+|................++.++.+... ...+.+++++++++++++.+ ++++.+++++++
T Consensus 288 ~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~ 366 (386)
T cd08283 288 ALREAIQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLTLRMGQT-HVQRYLPRLLELIESGELDPSFIITHRLPLEDAP 366 (386)
T ss_pred HHHHHHHHhccCCEEEEEcCCCCCcCccCHHHHHhCCcEEEeccC-CchHHHHHHHHHHHcCCCChhHceEEEecHHHHH
Confidence 367788999999999999864332222222233455666666542 34677999999999999886 466789999999
Q ss_pred HHHHHHHcCC-CcccEEEeC
Q 045248 222 DAWAESIDGH-ATGKIIVEP 240 (240)
Q Consensus 222 ~a~~~~~~~~-~~gkvvl~~ 240 (240)
+|++.+.++. ..+|+|+++
T Consensus 367 ~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 367 EAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred HHHHHHHhCCCCeEEEEecC
Confidence 9999998876 468999875
No 82
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.94 E-value=6.4e-26 Score=185.81 Aligned_cols=218 Identities=21% Similarity=0.305 Sum_probs=174.7
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|+.++++ ++++|+++++++++++ ..+.++++++ ...++ .++++|||+| +|++|.+++|+|+.+|
T Consensus 113 ~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l-----~~g~~vLI~g-~g~vG~~a~~lA~~~g 183 (337)
T cd08261 113 RDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGV-----TAGDTVLVVG-AGPIGLGVIQVAKARG 183 (337)
T ss_pred CCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 47999999999999 9999999999999877 4567888887 77777 8999999997 7999999999999999
Q ss_pred CEEEEEeC-cccHHHHHhcCCCEEEeCCCCc-cc-cccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCchH
Q 045248 92 THVTASCG-ARNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPSA 167 (240)
Q Consensus 92 ~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~ 167 (240)
++|+++.+ +++.+.++++|+++++++.+.+ .. ..+.+.+.++|+++|++|+ ..+..++++++++|+++.++.....
T Consensus 184 ~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~ 263 (337)
T cd08261 184 ARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGP 263 (337)
T ss_pred CeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCC
Confidence 99998875 4788888999999999877654 22 2344556779999999986 4578899999999999998854321
Q ss_pred HHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcC-CCcccEEEeC
Q 045248 168 MLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDG-HATGKIIVEP 240 (240)
Q Consensus 168 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~-~~~gkvvl~~ 240 (240)
.......+..++.++.+.. ....+.+++++++++++.+++ .+...+++++++++++.+.++ ...+|+|+++
T Consensus 264 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 264 -VTFPDPEFHKKELTILGSR-NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred -CccCHHHHHhCCCEEEEec-cCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 1122223334455555543 345678999999999999987 677789999999999999988 4778999864
No 83
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.94 E-value=5.5e-26 Score=186.66 Aligned_cols=218 Identities=20% Similarity=0.212 Sum_probs=173.5
Q ss_pred CcccceEEEecCC--ceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhC
Q 045248 13 GGGLAEFAVAKES--STVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLG 90 (240)
Q Consensus 13 ~G~~~e~~~v~~~--~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~ 90 (240)
+|+|++|+.++++ .++++|++++++++++++..+.|||+++ ....+ .++++|+|+| +|++|++++|+|+.+
T Consensus 118 ~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~-~~~~~-----~~~~~vlI~g-~g~vg~~~~~~a~~~ 190 (344)
T cd08284 118 DGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGA-KRAQV-----RPGDTVAVIG-CGPVGLCAVLSAQVL 190 (344)
T ss_pred CCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhh-HhcCC-----ccCCEEEEEC-CcHHHHHHHHHHHHc
Confidence 6999999999975 9999999999999999999999999999 45666 7899999997 899999999999999
Q ss_pred CC-EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-c-ccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCc
Q 045248 91 NT-HVTASCGA-RNIEFVKSLGADEVLDYKTPD-G-AALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 91 g~-~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~-~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~ 165 (240)
|+ +|+++++. ++.+.++++|+. +++....+ . ...+.+.++++|++||++|+ ..+..++++++++|+++.+|...
T Consensus 191 g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 269 (344)
T cd08284 191 GAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHT 269 (344)
T ss_pred CCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCC
Confidence 97 89988754 778888999975 45555443 2 22344566789999999996 45888999999999999998654
Q ss_pred hHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 166 SAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 166 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
.............++.++.... ....+.++++++++.++++.+ ++++++++++++++++.+.++.. +|+|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~~ 344 (344)
T cd08284 270 AEEFPFPGLDAYNKNLTLRFGR-CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLDP 344 (344)
T ss_pred CCCccccHHHHhhcCcEEEEec-CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEecC
Confidence 2222222223334555555432 356778999999999999875 46788999999999999988877 9999864
No 84
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.94 E-value=2e-26 Score=187.80 Aligned_cols=221 Identities=30% Similarity=0.404 Sum_probs=172.9
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHH
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGH 81 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~ 81 (240)
|..+.+.+....|+|++|+.++++.++++|+++++++++.+++.+.+||+++. ..++ +++++++|+|++|++|+
T Consensus 104 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~-~~~~-----~~g~~vlI~g~~g~vg~ 177 (325)
T cd08264 104 CRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK-TAGL-----GPGETVVVFGASGNTGI 177 (325)
T ss_pred cCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH-hcCC-----CCCCEEEEECCCchHHH
Confidence 33333334445799999999999999999999999999999999999999984 4777 89999999998899999
Q ss_pred HHHHHHHhCCCEEEEEeCcccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEe
Q 045248 82 YAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 82 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~ 161 (240)
+++++|+.+|++|+++++ .+.++++|++.+++..+. ...+.... +++|+++|++|+..+..++++++++|+++.+
T Consensus 178 ~~~~~a~~~G~~v~~~~~---~~~~~~~g~~~~~~~~~~-~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~ 252 (325)
T cd08264 178 FAVQLAKMMGAEVIAVSR---KDWLKEFGADEVVDYDEV-EEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTF 252 (325)
T ss_pred HHHHHHHHcCCeEEEEeH---HHHHHHhCCCeeecchHH-HHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEE
Confidence 999999999999888863 377788999888876432 12222122 6799999999987788999999999999999
Q ss_pred CCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccE
Q 045248 162 TPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKI 236 (240)
Q Consensus 162 g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 236 (240)
|.........+...+..++.++.+.. ...++.++++++++...+ ..+++.|+++++++|++.+.++...+|+
T Consensus 253 g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 253 GTLTGGEVKLDLSDLYSKQISIIGST-GGTRKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred ecCCCCCCccCHHHHhhcCcEEEEcc-CCCHHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 85322123333444555666677754 356788999999996544 4466789999999999999988777775
No 85
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.94 E-value=4.1e-26 Score=187.06 Aligned_cols=227 Identities=28% Similarity=0.391 Sum_probs=174.7
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcC-----CCCCCCeEEEEcCCchHHHHHHHH
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLD-----GSGQQKNILVTAASGGVGHYAVQL 86 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~-----~~~~g~~vlV~G~~g~vG~~~~~~ 86 (240)
.+|+|++|+.++.+.++++|+++++++++.+++.+.|||+++....++..+ ...++++++|+|++|++|++++++
T Consensus 95 ~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~ 174 (339)
T cd08249 95 RNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQL 174 (339)
T ss_pred CCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHH
Confidence 369999999999999999999999999999999999999998665433100 015789999999889999999999
Q ss_pred HHhCCCEEEEEeCcccHHHHHhcCCCEEEeCCCCc-cccccCCCCCcccEEEeCCCC-CCccccccCCCC--CcEEEEeC
Q 045248 87 AKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGT--NGKVIDIT 162 (240)
Q Consensus 87 a~~~g~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~--~G~iv~~g 162 (240)
|+.+|++|++++++++.+.++++|++++++..+.+ ...+....++++|+++|++|+ ..+..+++++++ +|+++.+|
T Consensus 175 a~~~G~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g 254 (339)
T cd08249 175 AKLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLL 254 (339)
T ss_pred HHHcCCeEEEEECcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEec
Confidence 99999999988877889999999999999876554 222333344789999999998 678999999999 99999998
Q ss_pred CCchHHHHHHHhhheeccceeeeEE------EcCCHHHHHHHHHHHHCCceEEecCceec--chhHHHHHHHHHcCC-Cc
Q 045248 163 PGPSAMLTFALKKLTFSKKQLVPLL------LIPKRENLDFLVKLVKEGKLKTVINSKHP--LSKAEDAWAESIDGH-AT 233 (240)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~a~~~~~~~~-~~ 233 (240)
...... ................. .......+..++++++++++.+.....++ ++++++|++.+.+++ ..
T Consensus 255 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 332 (339)
T cd08249 255 PVPEET--EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSG 332 (339)
T ss_pred CCCccc--cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccc
Confidence 654322 01111222211111110 01123567889999999999876556677 999999999999888 88
Q ss_pred ccEEEeC
Q 045248 234 GKIIVEP 240 (240)
Q Consensus 234 gkvvl~~ 240 (240)
+|+|+++
T Consensus 333 ~kvvv~~ 339 (339)
T cd08249 333 EKLVVRL 339 (339)
T ss_pred eEEEEeC
Confidence 9999874
No 86
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.94 E-value=4e-25 Score=182.16 Aligned_cols=223 Identities=26% Similarity=0.422 Sum_probs=173.7
Q ss_pred CcccceEEEecCC----ceeeCCCCCChhhhhhhchHHHHHHHHHHhhh-CCCcCCCCCCCeEEEEcCCchHHHHHHHHH
Q 045248 13 GGGLAEFAVAKES----STVARPSEVSAAEGSGLPVAGLTAHQALTQSA-GVKLDGSGQQKNILVTAASGGVGHYAVQLA 87 (240)
Q Consensus 13 ~G~~~e~~~v~~~----~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a 87 (240)
.|+|++|+++++. .++++|+++++++++.++..+.|||+++.... .+ ++|++++|+|++|++|++++|+|
T Consensus 98 ~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~-----~~g~~vlI~ga~~~vg~~~~~~a 172 (352)
T cd08247 98 QGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKL-----GPDSKVLVLGGSTSVGRFAIQLA 172 (352)
T ss_pred CceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhcc-----CCCCeEEEECCCchHHHHHHHHH
Confidence 6999999999997 78999999999999999999999999996665 67 89999999998899999999999
Q ss_pred HhC-CC-EEEEEeCcccHHHHHhcCCCEEEeCCCCc-----cccccCCC-CCcccEEEeCCCC-CCccccccCCC---CC
Q 045248 88 KLG-NT-HVTASCGARNIEFVKSLGADEVLDYKTPD-----GAALKSPS-GRKYDAVIHCATG-IPWSTFEPNLG---TN 155 (240)
Q Consensus 88 ~~~-g~-~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-----~~~~~~~~-~~~~d~v~d~~g~-~~~~~~~~~l~---~~ 155 (240)
+.+ |. +++++.++++.+.++++|++.+++..+.+ ...++... ++++|++|||+|+ .....++++++ ++
T Consensus 173 ~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~ 252 (352)
T cd08247 173 KNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN 252 (352)
T ss_pred HhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC
Confidence 987 55 67777766666788999999888865543 12233333 6789999999998 55778899999 99
Q ss_pred cEEEEeCCCchHH-H--------------HHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhH
Q 045248 156 GKVIDITPGPSAM-L--------------TFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKA 220 (240)
Q Consensus 156 G~iv~~g~~~~~~-~--------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 220 (240)
|+++.++...... . ........+...++......+..+.++++++++.++.+++.+++.++++++
T Consensus 253 G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 332 (352)
T cd08247 253 GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDY 332 (352)
T ss_pred CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHH
Confidence 9999764221100 0 011123334444444332223456788999999999999888889999999
Q ss_pred HHHHHHHHcCCCcccEEEeC
Q 045248 221 EDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 221 ~~a~~~~~~~~~~gkvvl~~ 240 (240)
+++++.+.+++..||+|+++
T Consensus 333 ~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 333 KEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred HHHHHHHHcCCCCCcEEEeC
Confidence 99999999988889999864
No 87
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.94 E-value=3.9e-26 Score=187.74 Aligned_cols=221 Identities=20% Similarity=0.239 Sum_probs=174.9
Q ss_pred CCcccceEEEecCC--ceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHh
Q 045248 12 NGGGLAEFAVAKES--STVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKL 89 (240)
Q Consensus 12 ~~G~~~e~~~v~~~--~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~ 89 (240)
.+|+|++|++++++ .++++|++++++++++++..+.|||+++ ...++ +++++|||.| +|++|++++|+|+.
T Consensus 117 ~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~-----~~~~~VlI~g-~g~vg~~~iqlak~ 189 (347)
T cd05278 117 IDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGI-----KPGSTVAVIG-AGPVGLCAVAGARL 189 (347)
T ss_pred CCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHH
Confidence 46999999999997 8999999999999999999999999998 66777 8999999987 79999999999999
Q ss_pred CCC-EEEEEeCc-ccHHHHHhcCCCEEEeCCCCcc-c-cccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCC
Q 045248 90 GNT-HVTASCGA-RNIEFVKSLGADEVLDYKTPDG-A-ALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 90 ~g~-~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~-~-~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
+|+ +++++.++ ++.+.++++|++.++++.+.+. . ....+.++++|+++|++|+ ..+..++++++++|+++.+|..
T Consensus 190 ~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~ 269 (347)
T cd05278 190 LGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVY 269 (347)
T ss_pred cCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCC
Confidence 997 88888754 6788889999999988766542 2 2234555789999999997 5688899999999999999854
Q ss_pred chHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEe--cCceecchhHHHHHHHHHcCCC-cccEEEeC
Q 045248 165 PSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTV--INSKHPLSKAEDAWAESIDGHA-TGKIIVEP 240 (240)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~-~gkvvl~~ 240 (240)
..............++.++.+... +..+.+++++++++++.+++. +...+++++++++++.+..+.. .+|+|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 270 GKPDPLPLLGEWFGKNLTFKTGLV-PVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred CCCcccCccchhhhceeEEEeecc-CchhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 322100011111234555555432 446789999999999998863 4578999999999999988776 67999875
No 88
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.94 E-value=7.2e-26 Score=185.81 Aligned_cols=228 Identities=16% Similarity=0.229 Sum_probs=172.6
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHH
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGH 81 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~ 81 (240)
|++....+...+|+|++|+.++++.++++|+++++++++++ ..+.+++++... .. .+|++|+|.| +|++|+
T Consensus 107 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~~~--~~-----~~g~~vlV~~-~g~vg~ 177 (341)
T PRK05396 107 CRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTALS--FD-----LVGEDVLITG-AGPIGI 177 (341)
T ss_pred CCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHHHc--CC-----CCCCeEEEEC-CCHHHH
Confidence 44433334445799999999999999999999999888754 344455555422 23 5899999987 799999
Q ss_pred HHHHHHHhCCC-EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cccc-cCCCCCcccEEEeCCCC-CCccccccCCCCCc
Q 045248 82 YAVQLAKLGNT-HVTASCGA-RNIEFVKSLGADEVLDYKTPD-GAAL-KSPSGRKYDAVIHCATG-IPWSTFEPNLGTNG 156 (240)
Q Consensus 82 ~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~-~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G 156 (240)
+++|+|+++|+ +|+++.++ ++.+.++++|++.++++++.+ ...+ +.+.+.++|++|||+|+ ..+..++++++++|
T Consensus 178 ~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G 257 (341)
T PRK05396 178 MAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGG 257 (341)
T ss_pred HHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCC
Confidence 99999999999 67777654 678888999999998876654 2222 34556789999999987 44788999999999
Q ss_pred EEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCC-ceEEecCceecchhHHHHHHHHHcCCCccc
Q 045248 157 KVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEG-KLKTVINSKHPLSKAEDAWAESIDGHATGK 235 (240)
Q Consensus 157 ~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~a~~~~~~~~~~gk 235 (240)
+++.+|..+.. ..+....+.+++.++.++......+.+..++++++++ ++.+.+.+.++++++++||+.+..+. .||
T Consensus 258 ~~v~~g~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk 335 (341)
T PRK05396 258 RIAMLGIPPGD-MAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGK 335 (341)
T ss_pred EEEEEecCCCC-CcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-Cce
Confidence 99999864321 2223455667777777764322344566788999988 45556778899999999999998877 799
Q ss_pred EEEeC
Q 045248 236 IIVEP 240 (240)
Q Consensus 236 vvl~~ 240 (240)
+|+++
T Consensus 336 ~vv~~ 340 (341)
T PRK05396 336 VILDW 340 (341)
T ss_pred EEEec
Confidence 99864
No 89
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.94 E-value=1.7e-25 Score=181.24 Aligned_cols=223 Identities=28% Similarity=0.372 Sum_probs=177.0
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|++++|+.++++.++++|++++..+++.++..+.++++++....++ .++++|+|+|++|++|++++++++.+|+
T Consensus 88 ~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~-----~~g~~vlI~g~~g~~g~~~~~~a~~~g~ 162 (320)
T cd05286 88 PGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPV-----KPGDTVLVHAAAGGVGLLLTQWAKALGA 162 (320)
T ss_pred CCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCC-----CCCCEEEEEcCCchHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999989999999999777877 8999999999999999999999999999
Q ss_pred EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc--cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHHH
Q 045248 93 HVTASCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAML 169 (240)
Q Consensus 93 ~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~ 169 (240)
+|++++++ ++.+.++++|++.+++..+.+ ......+.+.++|+++||+|+.....++++++++|+++.+|.......
T Consensus 163 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~ 242 (320)
T cd05286 163 TVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASGPVP 242 (320)
T ss_pred EEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCCCCC
Confidence 99998864 788888999998888765533 223344556789999999998778889999999999999985432111
Q ss_pred HHHHhhheeccceeeeEEE---cCC----HHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 170 TFALKKLTFSKKQLVPLLL---IPK----RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 170 ~~~~~~~~~~~~~i~~~~~---~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
.+....+..++.++.+... ... .+.+.++++++.++.+.+..++.|++++++++++.+..+...+|+|+.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 243 PFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred ccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 1111111133333332211 112 2345678899999998877778999999999999999888889999875
No 90
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.94 E-value=8.2e-26 Score=184.49 Aligned_cols=219 Identities=26% Similarity=0.313 Sum_probs=173.5
Q ss_pred cccceEEEecC-CceeeCCCCCC--hhhhhh-hchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHh
Q 045248 14 GGLAEFAVAKE-SSTVARPSEVS--AAEGSG-LPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKL 89 (240)
Q Consensus 14 G~~~e~~~v~~-~~~~~ip~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~ 89 (240)
|+|++|+.+++ +.++++|++++ +.++++ +++.+.|||+++.....+ .++++|||+|++|++|++++|+++.
T Consensus 94 ~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~-----~~~~~vlI~g~~g~ig~~~~~~a~~ 168 (329)
T cd05288 94 LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKP-----KPGETVVVSAAAGAVGSVVGQIAKL 168 (329)
T ss_pred cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCC-----CCCCEEEEecCcchHHHHHHHHHHH
Confidence 48999999999 99999999985 555555 888899999999777777 7899999999999999999999999
Q ss_pred CCCEEEEEeCc-ccHHHHHh-cCCCEEEeCCCCc-cccc-cCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCc
Q 045248 90 GNTHVTASCGA-RNIEFVKS-LGADEVLDYKTPD-GAAL-KSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 90 ~g~~v~~~~~~-~~~~~~~~-~g~~~v~~~~~~~-~~~~-~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~ 165 (240)
.|++|++++++ ++.+.+++ +|++.++++.+.+ ...+ +.. ++++|+++|++|+..+..++++++++|+++.+|...
T Consensus 169 ~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~-~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~ 247 (329)
T cd05288 169 LGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAA-PDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAIS 247 (329)
T ss_pred cCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhc-cCCceEEEEcchHHHHHHHHHhcCCCceEEEEeecc
Confidence 99999999865 78888887 9999888876644 2222 333 468999999999877889999999999999998543
Q ss_pred hHHHH-----HHHhhheeccceeeeEEEcCC----HHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccE
Q 045248 166 SAMLT-----FALKKLTFSKKQLVPLLLIPK----RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKI 236 (240)
Q Consensus 166 ~~~~~-----~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 236 (240)
..... .+......++.++.+...... .+.+.+++++++++.+++.....+++++++++++.+.++...||+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkv 327 (329)
T cd05288 248 QYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKL 327 (329)
T ss_pred CcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccce
Confidence 21110 112333456666666543222 356788999999999987666678999999999999988888888
Q ss_pred EE
Q 045248 237 IV 238 (240)
Q Consensus 237 vl 238 (240)
|+
T Consensus 328 vv 329 (329)
T cd05288 328 VV 329 (329)
T ss_pred eC
Confidence 74
No 91
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.94 E-value=1.1e-25 Score=186.14 Aligned_cols=220 Identities=21% Similarity=0.305 Sum_probs=176.9
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|+.++++.++++|+++++++++++++++.+||.++....++ .++++|||+| +|++|++++++|+..|
T Consensus 133 ~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~-----~~g~~vLI~g-~g~vG~a~i~lak~~G 206 (363)
T cd08279 133 GLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARV-----RPGDTVAVIG-CGGVGLNAIQGARIAG 206 (363)
T ss_pred cCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 469999999999999999999999999999999999999998788888 8999999996 7999999999999999
Q ss_pred CE-EEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cc-cccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCch
Q 045248 92 TH-VTASCGA-RNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 92 ~~-v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
++ |+++.++ ++.+.++++|++++++....+ .. ..+...+.++|+++|++|+ ..+..++++++++|+++.++....
T Consensus 207 ~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~ 286 (363)
T cd08279 207 ASRIIAVDPVPEKLELARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP 286 (363)
T ss_pred CCcEEEEcCCHHHHHHHHHhCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC
Confidence 95 8888864 788888999998888876544 22 2234446789999999995 457889999999999999985432
Q ss_pred -HHHHHHHhhheeccceeeeEEEc--CCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEE
Q 045248 167 -AMLTFALKKLTFSKKQLVPLLLI--PKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKII 237 (240)
Q Consensus 167 -~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv 237 (240)
....+....+..++..+.++++. ...+.+++++++++++.+.+ .++++++++++++|++.+.+++..+.++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 287 GETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred CcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 22223333344456666665442 34678999999999999875 4678899999999999999888664444
No 92
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.94 E-value=1.5e-25 Score=185.89 Aligned_cols=220 Identities=15% Similarity=0.133 Sum_probs=170.1
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|+||++++++.++++|+++++++++++++++.+||+++....++ +++++|+|+| +|++|++++++|+.+|
T Consensus 141 ~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~-----~~g~~VlV~G-~g~vG~~~~~~a~~~G 214 (373)
T cd08299 141 GTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKV-----TPGSTCAVFG-LGGVGLSAIMGCKAAG 214 (373)
T ss_pred CCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 368999999999999999999999999999999999999998777888 8999999997 8999999999999999
Q ss_pred C-EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc---cccc-cCCCCCcccEEEeCCCCC-CccccccCC-CCCcEEEEeCC
Q 045248 92 T-HVTASCGA-RNIEFVKSLGADEVLDYKTPD---GAAL-KSPSGRKYDAVIHCATGI-PWSTFEPNL-GTNGKVIDITP 163 (240)
Q Consensus 92 ~-~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~---~~~~-~~~~~~~~d~v~d~~g~~-~~~~~~~~l-~~~G~iv~~g~ 163 (240)
+ +|++++++ ++++.++++|++.+++..+.+ ...+ +.+. +++|+++|++|++ .+..++..+ +++|+++.+|.
T Consensus 215 ~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~ 293 (373)
T cd08299 215 ASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGV 293 (373)
T ss_pred CCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEcc
Confidence 9 89999864 889999999999998865432 1222 2233 5799999999964 466656654 67899999986
Q ss_pred CchH-HHHHHHhhheeccceeeeEEEc--CCHHHHHHHHHHHHCCce--EEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 164 GPSA-MLTFALKKLTFSKKQLVPLLLI--PKRENLDFLVKLVKEGKL--KTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 164 ~~~~-~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
.... ..++....+ .++.++.+++.. .+.+.+.++++.+.++.+ ++.+++.|+++++++||+.+.+++. .|+++
T Consensus 294 ~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~ 371 (373)
T cd08299 294 PPSSQNLSINPMLL-LTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVL 371 (373)
T ss_pred CCCCceeecCHHHH-hcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEE
Confidence 4321 222222112 345567776542 234677788888887754 3467789999999999999887764 47777
Q ss_pred eC
Q 045248 239 EP 240 (240)
Q Consensus 239 ~~ 240 (240)
++
T Consensus 372 ~~ 373 (373)
T cd08299 372 TF 373 (373)
T ss_pred eC
Confidence 53
No 93
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.94 E-value=1.8e-25 Score=183.77 Aligned_cols=220 Identities=20% Similarity=0.244 Sum_probs=175.1
Q ss_pred CCcccceEEEecCC--ceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHh
Q 045248 12 NGGGLAEFAVAKES--STVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKL 89 (240)
Q Consensus 12 ~~G~~~e~~~v~~~--~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~ 89 (240)
.+|+|++|+.++++ .++++|++++..+++.++..+.+||.++....++ .+++++||+| +|++|.+++|+|+.
T Consensus 115 ~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~-----~~g~~vlI~g-~g~~g~~~~~~a~~ 188 (345)
T cd08286 115 IDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKV-----KPGDTVAIVG-AGPVGLAALLTAQL 188 (345)
T ss_pred cCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHH
Confidence 46999999999987 8999999999999999999999999977667777 8999999988 69999999999999
Q ss_pred CC-CEEEEEeCc-ccHHHHHhcCCCEEEeCCCCcc--ccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCC
Q 045248 90 GN-THVTASCGA-RNIEFVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 90 ~g-~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
+| .+|+++.++ ++.+.++++|++.++++.+.+. ...+.+.+.++|+++|++|. ..+..++++++++|+++.+|..
T Consensus 189 ~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~ 268 (345)
T cd08286 189 YSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVH 268 (345)
T ss_pred cCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEeccc
Confidence 99 588887764 6788889999999998765442 22344566789999999986 4477888999999999999854
Q ss_pred chHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCC--CcccEEEeC
Q 045248 165 PSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGH--ATGKIIVEP 240 (240)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~--~~gkvvl~~ 240 (240)
.. ...++...+..++.++.+... ..+.+++++++++++.+.+ .+++++++++++++++.+.... ...|+|++|
T Consensus 269 ~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 269 GK-PVDLHLEKLWIKNITITTGLV--DTNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred CC-CCCcCHHHHhhcCcEEEeecC--chhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 32 122233333456666666432 3357888999999998875 4678999999999999988753 345999875
No 94
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.94 E-value=1.8e-25 Score=183.48 Aligned_cols=218 Identities=19% Similarity=0.194 Sum_probs=172.7
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|+||+.++++.++++|+++++++++ ++..+.+||+++ ...++ +++++|||+| +|++|.+++|+|+.+|
T Consensus 114 ~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~-----~~g~~VlI~g-~g~vg~~~~~la~~~G 185 (341)
T cd08262 114 APGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARL-----TPGEVALVIG-CGPIGLAVIAALKARG 185 (341)
T ss_pred CCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 46999999999999999999999999877 566778999986 77778 8999999998 6999999999999999
Q ss_pred CE-EEEEeC-cccHHHHHhcCCCEEEeCCCCcc-----ccccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCC
Q 045248 92 TH-VTASCG-ARNIEFVKSLGADEVLDYKTPDG-----AALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 92 ~~-v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~-----~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~ 163 (240)
++ ++++.+ +++.++++++|+++++++...+. ...+...++++|+++|++|+. .+..++++++++|+++.+|.
T Consensus 186 ~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~ 265 (341)
T cd08262 186 VGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGV 265 (341)
T ss_pred CcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECC
Confidence 95 555554 47888889999988888765431 122344567899999999984 57888999999999999985
Q ss_pred CchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 164 GPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
...... ........++.++.++. ..+.+.+++++++++++.+.+ .+++.+++++++++++.+.++...||+|++
T Consensus 266 ~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 266 CMESDN-IEPALAIRKELTLQFSL-GYTPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CCCCCc-cCHHHHhhcceEEEEEe-cccHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 422111 11111134566666554 356678999999999999875 457889999999999999999888999874
No 95
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.94 E-value=3.3e-25 Score=181.07 Aligned_cols=218 Identities=24% Similarity=0.312 Sum_probs=175.2
Q ss_pred ccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHH
Q 045248 9 VSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 88 (240)
Q Consensus 9 ~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~ 88 (240)
+.+..|+|++|+.++++.++++|+++++++++.++..+.+||+++. ...+ .++++|||+| +|++|++++++|+
T Consensus 111 ~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~-~~~~-----~~~~~vlI~g-~g~iG~~~~~~a~ 183 (330)
T cd08245 111 GYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR-DAGP-----RPGERVAVLG-IGGLGHLAVQYAR 183 (330)
T ss_pred CcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH-hhCC-----CCCCEEEEEC-CCHHHHHHHHHHH
Confidence 4445799999999999999999999999999999999999999994 4677 8999999997 7889999999999
Q ss_pred hCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCch
Q 045248 89 LGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 89 ~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
.+|++|++++++ ++.+.++++|++.+++......... . ..++|+++|+++. .....++++++++|+++.++....
T Consensus 184 ~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~-~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~ 260 (330)
T cd08245 184 AMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQA--A-AGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPES 260 (330)
T ss_pred HCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHh--c-cCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCC
Confidence 999999998865 7888889999988887554331111 2 2479999999885 558889999999999999985432
Q ss_pred HHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 167 AMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
.........+..++.++.+... .....++++++++.++.+.+ ..+.+++++++++++.+.++...||+|+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 261 PPFSPDIFPLIMKRQSIAGSTH-GGRADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred CccccchHHHHhCCCEEEEecc-CCHHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 2222212334456667777654 45678999999999999876 4468999999999999999988888874
No 96
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=9.3e-26 Score=172.50 Aligned_cols=221 Identities=24% Similarity=0.318 Sum_probs=181.0
Q ss_pred ccceEEEecCCc--eeeCC--CCCChhhhh-hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHh
Q 045248 15 GLAEFAVAKESS--TVARP--SEVSAAEGS-GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKL 89 (240)
Q Consensus 15 ~~~e~~~v~~~~--~~~ip--~~~~~~~aa-~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~ 89 (240)
+|.||.++++.. .+++| .++++.-.. ++..+.+|||-.+++.+.. ++|++|+|.||+|++|+.+.|+|+.
T Consensus 102 gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p-----k~geTv~VSaAsGAvGql~GQ~Ak~ 176 (343)
T KOG1196|consen 102 GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP-----KKGETVFVSAASGAVGQLVGQFAKL 176 (343)
T ss_pred cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC-----CCCCEEEEeeccchhHHHHHHHHHh
Confidence 799999997753 34444 345544433 4466778999999999988 8999999999999999999999999
Q ss_pred CCCEEEEEeCc-ccHHHHH-hcCCCEEEeCCCCc--cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCc
Q 045248 90 GNTHVTASCGA-RNIEFVK-SLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 90 ~g~~v~~~~~~-~~~~~~~-~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~ 165 (240)
+||+|+.++.+ ++...++ ++|.+..+||.++. ...++...++|+|+-||.+|+..++..+..++..|+++.+|..+
T Consensus 177 ~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~IS 256 (343)
T KOG1196|consen 177 MGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMIS 256 (343)
T ss_pred cCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeeh
Confidence 99999999965 8888885 67999999999884 45667788999999999999999999999999999999999543
Q ss_pred -----hHHHHHHHhhheeccceeeeEEEcC----CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccE
Q 045248 166 -----SAMLTFALKKLTFSKKQLVPLLLIP----KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKI 236 (240)
Q Consensus 166 -----~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 236 (240)
..+.-.....+..+++++.++.... ..+.++.+..++.+|+|+-.-+-.-.|+..++||.-+.+|+..||.
T Consensus 257 qYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKq 336 (343)
T KOG1196|consen 257 QYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQ 336 (343)
T ss_pred hccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccce
Confidence 1122223456779999999976532 3556788899999999987666566899999999999999999999
Q ss_pred EEeC
Q 045248 237 IVEP 240 (240)
Q Consensus 237 vl~~ 240 (240)
++.+
T Consensus 337 iv~v 340 (343)
T KOG1196|consen 337 LVKV 340 (343)
T ss_pred EEEe
Confidence 8763
No 97
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.94 E-value=1.9e-25 Score=183.35 Aligned_cols=218 Identities=23% Similarity=0.282 Sum_probs=169.8
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|++++++.++++|++++++.+ +++..+.++++++. ... +++++|+|+| +|++|++++|+|+.+|
T Consensus 117 ~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~~--~~~-----~~g~~vlV~g-~g~vg~~~~~la~~~G 187 (341)
T cd05281 117 TDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTVL--AGD-----VSGKSVLITG-CGPIGLMAIAVAKAAG 187 (341)
T ss_pred CCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHHH--hcC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 4699999999999999999999998544 56666678888763 334 6899999987 7999999999999999
Q ss_pred C-EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cccccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCchH
Q 045248 92 T-HVTASCGA-RNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGPSA 167 (240)
Q Consensus 92 ~-~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~ 167 (240)
+ +|+++.++ ++.+.++++|++++++....+ ....+...++++|++||++|+. ....++++|+++|+++.+|.....
T Consensus 188 ~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~ 267 (341)
T cd05281 188 ASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP 267 (341)
T ss_pred CcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC
Confidence 9 78888654 678888999998888765444 2223445667899999999874 478889999999999999854321
Q ss_pred HHHHH-HhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 168 MLTFA-LKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 168 ~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
.... .....+++.++.+.......+.+.+++++++++.+. +.++..+++++++++|+.+.++. .||+|++|
T Consensus 268 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 268 -VDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred -cccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 1111 223556666777655333346788899999999876 45667889999999999999988 89999875
No 98
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.94 E-value=2e-25 Score=183.16 Aligned_cols=218 Identities=22% Similarity=0.261 Sum_probs=169.4
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|++++++.++++|++++++++ +++..+.++++++ .... .++++++|.| +|++|.+++|+++.+|
T Consensus 115 ~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~-----~~g~~vlI~~-~g~vg~~a~~la~~~G 185 (340)
T TIGR00692 115 TDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGP-----ISGKSVLVTG-AGPIGLMAIAVAKASG 185 (340)
T ss_pred CCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 5799999999999999999999998654 5666777888876 2334 6899999987 7999999999999999
Q ss_pred CE-EEEEeCc-ccHHHHHhcCCCEEEeCCCCcc-c-cccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCch
Q 045248 92 TH-VTASCGA-RNIEFVKSLGADEVLDYKTPDG-A-ALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 92 ~~-v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~-~-~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
++ |+++.++ ++.+.++++|++.+++....+. . ..+...++++|+++|++|+ ..+...+++++++|+++.+|....
T Consensus 186 ~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~ 265 (340)
T TIGR00692 186 AYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPG 265 (340)
T ss_pred CcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCC
Confidence 96 8888654 6788889999988887765442 2 2234556789999999986 457888999999999999986432
Q ss_pred HHHHH-HHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 167 AMLTF-ALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 167 ~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
. ... ....+.+++.++.+.......+.+.++++++++++++ +.+...++++++.++++.+.++. .||+|+++
T Consensus 266 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~gkvvv~~ 340 (340)
T TIGR00692 266 K-VTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQ-TGKVILSL 340 (340)
T ss_pred C-cccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCC-CceEEEeC
Confidence 1 111 2224556666776654223445688899999999986 45678999999999999998887 49999874
No 99
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.94 E-value=1.5e-24 Score=176.06 Aligned_cols=220 Identities=41% Similarity=0.615 Sum_probs=172.3
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|++|+.++++.++++|+++++++++.+++.+.+||+++.....+ .++++++|+|++|++|++++++++.+|+
T Consensus 95 ~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~g~~vli~g~~g~~g~~~~~la~~~g~ 169 (319)
T cd08267 95 GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKV-----KPGQRVLINGASGGVGTFAVQIAKALGA 169 (319)
T ss_pred CceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCC-----CCCCEEEEEcCCcHHHHHHHHHHHHcCC
Confidence 58999999999999999999999999999999999999999776667 8999999999889999999999999999
Q ss_pred EEEEEeCcccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC--CccccccCCCCCcEEEEeCCCchHHHH
Q 045248 93 HVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI--PWSTFEPNLGTNGKVIDITPGPSAMLT 170 (240)
Q Consensus 93 ~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~iv~~g~~~~~~~~ 170 (240)
+|++++++++.+.++++|.+.+++....+.. .....++++|+++||+|+. .....+..++++|+++.+|........
T Consensus 170 ~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~ 248 (319)
T cd08267 170 HVTGVCSTRNAELVRSLGADEVIDYTTEDFV-ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLL 248 (319)
T ss_pred EEEEEeCHHHHHHHHHcCCCEeecCCCCCcc-hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccccc
Confidence 9999887678888899999888876544322 3445667899999999953 233444459999999999864322111
Q ss_pred HH---HhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 171 FA---LKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 171 ~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
.. ..........+......+..+.+.+++++++++.+.+.+++++++++++++++.+.++...+|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 249 VLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred cccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 11 001112222222222234578899999999999999888899999999999999998887788874
No 100
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.94 E-value=6.5e-25 Score=179.68 Aligned_cols=220 Identities=27% Similarity=0.384 Sum_probs=174.6
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCC-----CCeEEEEcCCchHHHHHHHH
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQ-----QKNILVTAASGGVGHYAVQL 86 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~-----g~~vlV~G~~g~vG~~~~~~ 86 (240)
..|+|++|+.++++.++++|+++++++++.+++.+.+||+++....++ .+ +++|+|+|++|++|++++|+
T Consensus 95 ~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~-----~~~~~~~g~~vlV~g~~g~vg~~~~~~ 169 (336)
T cd08252 95 RPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGI-----SEDAENEGKTLLIIGGAGGVGSIAIQL 169 (336)
T ss_pred CCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCC-----CCCcCCCCCEEEEEcCCchHHHHHHHH
Confidence 469999999999999999999999999999999999999998777777 55 99999999899999999999
Q ss_pred HHhCC-CEEEEEeC-cccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCC
Q 045248 87 AKLGN-THVTASCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 87 a~~~g-~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~ 163 (240)
|+.+| ++|+++++ +++.+.++++|++.+++........+....++++|+++|++|+ ..+..++++++++|+++.+|.
T Consensus 170 a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~ 249 (336)
T cd08252 170 AKQLTGLTVIATASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVD 249 (336)
T ss_pred HHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecC
Confidence 99999 89999986 4788999999999888765422222233344689999999996 568899999999999999986
Q ss_pred CchHHHHHHHhhheeccceeeeEEEc-----------CCHHHHHHHHHHHHCCceEEecC---ceecchhHHHHHHHHHc
Q 045248 164 GPSAMLTFALKKLTFSKKQLVPLLLI-----------PKRENLDFLVKLVKEGKLKTVIN---SKHPLSKAEDAWAESID 229 (240)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~a~~~~~~ 229 (240)
... ......+..++.++.+.... ...+.++++++++.++.+.+..+ ..+++++++++++.+.+
T Consensus 250 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~ 326 (336)
T cd08252 250 PQE---PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLES 326 (336)
T ss_pred CCC---cccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHc
Confidence 421 11222233445555543321 11345888999999999987543 34799999999999999
Q ss_pred CCCcccEEEe
Q 045248 230 GHATGKIIVE 239 (240)
Q Consensus 230 ~~~~gkvvl~ 239 (240)
+...+|++++
T Consensus 327 ~~~~~~vv~~ 336 (336)
T cd08252 327 GKTIGKIVLE 336 (336)
T ss_pred CCccceEEeC
Confidence 9888999874
No 101
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.93 E-value=5e-25 Score=181.09 Aligned_cols=222 Identities=22% Similarity=0.268 Sum_probs=170.8
Q ss_pred ccCCCcccceEEEecCC--ceeeCCCCCChhhhh-----hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHH
Q 045248 9 VSHNGGGLAEFAVAKES--STVARPSEVSAAEGS-----GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGH 81 (240)
Q Consensus 9 ~~~~~G~~~e~~~v~~~--~~~~ip~~~~~~~aa-----~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~ 81 (240)
+...+|+|+||+.++.+ .++++|++++++++. ++...+.+|++++ ...++ +++++++|.| +|++|+
T Consensus 110 ~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~-----~~g~~vlI~g-~g~vg~ 182 (345)
T cd08287 110 GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGV-----RPGSTVVVVG-DGAVGL 182 (345)
T ss_pred cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHH
Confidence 33456999999999975 999999999983221 2225677899998 56677 7899999987 899999
Q ss_pred HHHHHHHhCCCE-EEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cc-cccCCCCCcccEEEeCCCC-CCccccccCCCCCc
Q 045248 82 YAVQLAKLGNTH-VTASCGA-RNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNG 156 (240)
Q Consensus 82 ~~~~~a~~~g~~-v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G 156 (240)
+++|+|+++|++ ++++++. ++.+.++++|++.++++.... .. ..+.+.+.++|+++|++|+ ..+..++++++++|
T Consensus 183 ~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g 262 (345)
T cd08287 183 CAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGG 262 (345)
T ss_pred HHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCC
Confidence 999999999995 7777755 578888999999999887654 22 2344566789999999986 45889999999999
Q ss_pred EEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcc
Q 045248 157 KVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATG 234 (240)
Q Consensus 157 ~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~g 234 (240)
+++.+|.... ...+.......++.++.+.. ....+.+++++++++++.+++ .+++.+++++++++++.+.++...
T Consensus 263 ~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~- 339 (345)
T cd08287 263 RVGYVGVPHG-GVELDVRELFFRNVGLAGGP-APVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI- 339 (345)
T ss_pred EEEEecccCC-CCccCHHHHHhcceEEEEec-CCcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-
Confidence 9999986542 12222223345666666643 345678999999999999886 457889999999999998876654
Q ss_pred cEEEeC
Q 045248 235 KIIVEP 240 (240)
Q Consensus 235 kvvl~~ 240 (240)
|+++++
T Consensus 340 k~~~~~ 345 (345)
T cd08287 340 KVLLRP 345 (345)
T ss_pred EEEeCC
Confidence 998864
No 102
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.93 E-value=5e-25 Score=182.98 Aligned_cols=217 Identities=20% Similarity=0.206 Sum_probs=170.8
Q ss_pred CcccceEEEecCC--ceeeCCCCCChh---hhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHH
Q 045248 13 GGGLAEFAVAKES--STVARPSEVSAA---EGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLA 87 (240)
Q Consensus 13 ~G~~~e~~~v~~~--~~~~ip~~~~~~---~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a 87 (240)
+|+|+||+.++.. .++++|++++++ ++++++..+.|+|+++ ...++ .+|++|+|.| +|++|++++|+|
T Consensus 124 ~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~-----~~g~~vlI~g-~g~vg~~~~~~a 196 (375)
T cd08282 124 GGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGV-----QPGDTVAVFG-AGPVGLMAAYSA 196 (375)
T ss_pred CCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHH
Confidence 5999999999976 899999999998 5677788888999999 77787 8999999987 799999999999
Q ss_pred HhCCC-EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cccc-cCCCCCcccEEEeCCCCCC------------ccccccC
Q 045248 88 KLGNT-HVTASCGA-RNIEFVKSLGADEVLDYKTPD-GAAL-KSPSGRKYDAVIHCATGIP------------WSTFEPN 151 (240)
Q Consensus 88 ~~~g~-~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~-~~~~~~~~d~v~d~~g~~~------------~~~~~~~ 151 (240)
+++|+ +|++++++ ++.+.++++|++ .+++.+.+ ...+ +.+. +++|+++||+|+.. +..++++
T Consensus 197 ~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~ 274 (375)
T cd08282 197 ILRGASRVYVVDHVPERLDLAESIGAI-PIDFSDGDPVEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRV 274 (375)
T ss_pred HHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCcccHHHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHH
Confidence 99998 89887764 788899999984 56665543 2222 3333 67999999999764 6788899
Q ss_pred CCCCcEEEEeCCCchH------------HHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecc
Q 045248 152 LGTNGKVIDITPGPSA------------MLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPL 217 (240)
Q Consensus 152 l~~~G~iv~~g~~~~~------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~ 217 (240)
++++|+++.+|..... ...+....+..++..+.+.. ....+.++.++++++++++++ .+++++++
T Consensus 275 l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l 353 (375)
T cd08282 275 TRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQ-APVKKYNRQLRDLILAGRAKPSFVVSHVISL 353 (375)
T ss_pred hhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEec-CCchhhHHHHHHHHHcCCCChHHcEEEEeeH
Confidence 9999999888753211 11223333444555555543 345677899999999999986 47899999
Q ss_pred hhHHHHHHHHHcCCCcccEEEeC
Q 045248 218 SKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 218 ~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
++++++++.+.++. .+|+|+++
T Consensus 354 ~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 354 EDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred HHHHHHHHHHhcCC-ceEEEeCC
Confidence 99999999999888 88999864
No 103
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.93 E-value=4.1e-25 Score=181.44 Aligned_cols=219 Identities=21% Similarity=0.269 Sum_probs=171.7
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|+.++++.++++|+++++++++++ ..+.+||+++ ....+ .++++|+|+| +|.+|.+++|+|+.+|
T Consensus 112 ~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~-----~~~~~vlI~g-~g~~g~~~~~lA~~~G 183 (343)
T cd08236 112 RDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAV-RLAGI-----TLGDTVVVIG-AGTIGLLAIQWLKILG 183 (343)
T ss_pred cCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 5799999999999999999999999999887 4667999998 47777 7999999997 7999999999999999
Q ss_pred CE-EEEEeCc-ccHHHHHhcCCCEEEeCCCCccc-cccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCchH
Q 045248 92 TH-VTASCGA-RNIEFVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGPSA 167 (240)
Q Consensus 92 ~~-v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~-~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~ 167 (240)
++ |++++++ ++.+.++++|++.++++.+.... ......+.++|+++||+|+. .+..++++++++|+++.+|.....
T Consensus 184 ~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~ 263 (343)
T cd08236 184 AKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD 263 (343)
T ss_pred CCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC
Confidence 96 8888864 77888889999888887654322 22345556799999999864 578899999999999999854321
Q ss_pred H--HHHHHhhheeccceeeeEEEcC----CHHHHHHHHHHHHCCceE--EecCceecchhHHHHHHHHHc-CCCcccEEE
Q 045248 168 M--LTFALKKLTFSKKQLVPLLLIP----KRENLDFLVKLVKEGKLK--TVINSKHPLSKAEDAWAESID-GHATGKIIV 238 (240)
Q Consensus 168 ~--~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvl 238 (240)
. .......+..++.++.+++... ..+.+++++++++++.+. +.+...+++++++++++.+.+ +...||+|+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 264 VTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred cccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 0 1111222335566666655421 256788999999999875 455678999999999999998 566778874
No 104
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.93 E-value=7.5e-25 Score=179.61 Aligned_cols=217 Identities=21% Similarity=0.287 Sum_probs=169.6
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
.+|+|+||++++++.++++|++++++++++ ...+.++|+++.. ... .++++|||.| +|++|++++|+|+.+|
T Consensus 118 ~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~-~~~-----~~~~~VLI~g-~g~vG~~~~~lak~~G 189 (339)
T cd08232 118 VQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNR-AGD-----LAGKRVLVTG-AGPIGALVVAAARRAG 189 (339)
T ss_pred CCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHh-cCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 469999999999999999999999999876 5666789998844 444 4789999987 7999999999999999
Q ss_pred C-EEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCchHH
Q 045248 92 T-HVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPSAM 168 (240)
Q Consensus 92 ~-~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~ 168 (240)
+ ++++++++ ++.+.++++|++.++++.+.+.... .....++|+++|++|+ ..+...+++|+++|+++.+|.....
T Consensus 190 ~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~-~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~- 267 (339)
T cd08232 190 AAEIVATDLADAPLAVARAMGADETVNLARDPLAAY-AADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGP- 267 (339)
T ss_pred CcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhh-hccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-
Confidence 9 88888864 6777888999999887765431111 1233569999999996 4588899999999999999854311
Q ss_pred HHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 169 LTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 169 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
..........++.++.+.. ...+.+++++++++++.+++ .+.+++++++++++++.+..+...||+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 268 VPLPLNALVAKELDLRGSF--RFDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred ccCcHHHHhhcceEEEEEe--cCHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 1112222345666666654 34567899999999998863 4677899999999999999888889999874
No 105
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.93 E-value=4.7e-25 Score=178.93 Aligned_cols=228 Identities=27% Similarity=0.381 Sum_probs=178.8
Q ss_pred eecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHH
Q 045248 6 RIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQ 85 (240)
Q Consensus 6 ~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~ 85 (240)
++.+...+|+|++|+.++++.++++|+++++.+++.++..+.++|+++.....+ .++++++|+|++|++|+++++
T Consensus 84 ~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~-----~~~~~vlv~g~~~~ig~~~~~ 158 (323)
T cd05276 84 RVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGL-----KAGETVLIHGGASGVGTAAIQ 158 (323)
T ss_pred EEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCC-----CCCCEEEEEcCcChHHHHHHH
Confidence 334444469999999999999999999999999999999999999998777777 799999999988999999999
Q ss_pred HHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCc--cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeC
Q 045248 86 LAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 86 ~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g 162 (240)
+++..|++|+++.++ ++.+.++++|.+.+++....+ ....+...+.++|+++|++|+..+...+++++++|+++.++
T Consensus 159 ~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~ 238 (323)
T cd05276 159 LAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIG 238 (323)
T ss_pred HHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEe
Confidence 999999999988865 778888889988888766543 12223344568999999999877888899999999999987
Q ss_pred CCchHHHHHHHhhheeccceeeeEEEcC---------CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCc
Q 045248 163 PGPSAMLTFALKKLTFSKKQLVPLLLIP---------KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHAT 233 (240)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~ 233 (240)
.............+..++.++.+..... ..+.+.++++++.++++.+..++.|++++++++++.+.++...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 318 (323)
T cd05276 239 LLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHI 318 (323)
T ss_pred cCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCc
Confidence 5422111112222223556666654311 1234677888999999987778899999999999999988878
Q ss_pred ccEEE
Q 045248 234 GKIIV 238 (240)
Q Consensus 234 gkvvl 238 (240)
||+++
T Consensus 319 ~kvv~ 323 (323)
T cd05276 319 GKIVL 323 (323)
T ss_pred ceEeC
Confidence 88874
No 106
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.93 E-value=4.8e-25 Score=182.47 Aligned_cols=217 Identities=22% Similarity=0.286 Sum_probs=168.0
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
+|+|+||++++++.++++|++++++++++. ..+.++++++ ...++ .++++++|+| +|++|++++|+|+.+|+
T Consensus 135 ~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~~~~~-----~~g~~vlI~g-~g~vG~~~~~~a~~~G~ 206 (364)
T PLN02702 135 HGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-RRANI-----GPETNVLVMG-AGPIGLVTMLAARAFGA 206 (364)
T ss_pred CCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 699999999999999999999999998763 2233578887 77777 7899999997 79999999999999999
Q ss_pred E-EEEEeCc-ccHHHHHhcCCCEEEeCCC--Cc-cccc---cCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCC
Q 045248 93 H-VTASCGA-RNIEFVKSLGADEVLDYKT--PD-GAAL---KSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 93 ~-v~~~~~~-~~~~~~~~~g~~~v~~~~~--~~-~~~~---~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~ 163 (240)
+ ++++.++ ++.+.++++|++.++++.. .+ ...+ ....+.++|++||++|+ ..+..++++++++|+++.+|.
T Consensus 207 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 286 (364)
T PLN02702 207 PRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGM 286 (364)
T ss_pred CEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcc
Confidence 5 5666554 6788889999988876532 22 1221 11334579999999995 558899999999999999985
Q ss_pred CchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceE--EecCceecc--hhHHHHHHHHHcCCCcccEEEe
Q 045248 164 GPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLK--TVINSKHPL--SKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
.... .......+.+++.++.+++. ....++.++++++++++. +.+++.|++ +++++|++.+.++...+|+|+.
T Consensus 287 ~~~~-~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 287 GHNE-MTVPLTPAAAREVDVVGVFR--YRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred CCCC-CcccHHHHHhCccEEEEecc--ChHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 4321 22234445677888888653 356788999999999875 456677555 8999999999988878899986
Q ss_pred C
Q 045248 240 P 240 (240)
Q Consensus 240 ~ 240 (240)
+
T Consensus 364 ~ 364 (364)
T PLN02702 364 L 364 (364)
T ss_pred C
Confidence 3
No 107
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.93 E-value=2.9e-25 Score=178.86 Aligned_cols=221 Identities=29% Similarity=0.446 Sum_probs=176.2
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|+.++++.++++|++++++++++++..+.++|+++ ...++ +++++++|+|++|++|++++|+++.+|
T Consensus 72 ~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~-----~~g~~vli~~~~~~~g~~~~~~a~~~g 145 (303)
T cd08251 72 SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGL-----AKGEHILIQTATGGTGLMAVQLARLKG 145 (303)
T ss_pred CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCC-----CCCCEEEEecCCcHHHHHHHHHHHHcC
Confidence 359999999999999999999999999999999999999998 56777 899999999999999999999999999
Q ss_pred CEEEEEeCc-ccHHHHHhcCCCEEEeCCCCc--cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCch--
Q 045248 92 THVTASCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPS-- 166 (240)
Q Consensus 92 ~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~-- 166 (240)
++|+++++. ++.+.++++|++.+++....+ ......+.+.++|+++|++++......+++++++|+++.++....
T Consensus 146 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~ 225 (303)
T cd08251 146 AEIYATASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKS 225 (303)
T ss_pred CEEEEEcCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCc
Confidence 999999865 788888999999888876544 223344566789999999987778888999999999998874321
Q ss_pred -H--HHHHHHhhheeccceeeeEEEc---CCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 167 -A--MLTFALKKLTFSKKQLVPLLLI---PKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 167 -~--~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
. ..........++...+...... ...+.+.+++++++++.+++..++.+++++++++++.+.++...+|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 226 APSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred cCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 1 1111222333444433332211 1134578889999999998878889999999999999998888888874
No 108
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.93 E-value=3.4e-24 Score=176.47 Aligned_cols=224 Identities=32% Similarity=0.493 Sum_probs=172.5
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|++|+.++++.++++|+++++++++.+++.+.|+|+++.+...+. +...+|++++|+|++|++|++++++++.+|+
T Consensus 110 ~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~ 188 (350)
T cd08248 110 QGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLN-PKNAAGKRVLILGGSGGVGTFAIQLLKAWGA 188 (350)
T ss_pred CccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCC-CccCCCCEEEEECCCChHHHHHHHHHHHCCC
Confidence 699999999999999999999999999999999999999986666551 0001499999999899999999999999999
Q ss_pred EEEEEeCcccHHHHHhcCCCEEEeCCCCc-cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchH---H
Q 045248 93 HVTASCGARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSA---M 168 (240)
Q Consensus 93 ~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~---~ 168 (240)
+|+++.++++.+.++++|.+.+++..+.+ ...+. ...++|+++|++|+..+..++++++++|+++.+|..... .
T Consensus 189 ~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~--~~~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 266 (350)
T cd08248 189 HVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELT--ERGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDK 266 (350)
T ss_pred eEEEEeCcchHHHHHHhCCceEEECCChhHHHHHH--hcCCCCEEEECCChHHHHHHHHHhccCCEEEEecCCccccccc
Confidence 99888876778888999998888765533 22222 235799999999988888999999999999998743210 0
Q ss_pred --H--HHHHhhheec---------cceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCccc
Q 045248 169 --L--TFALKKLTFS---------KKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGK 235 (240)
Q Consensus 169 --~--~~~~~~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gk 235 (240)
. ......+.+. ...+.........+.+.++++++.++.+.+.+++.+++++++++++.+.++...+|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 346 (350)
T cd08248 267 LGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGK 346 (350)
T ss_pred ccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceE
Confidence 0 0000111111 11111111234577899999999999998888889999999999999998887888
Q ss_pred EEEe
Q 045248 236 IIVE 239 (240)
Q Consensus 236 vvl~ 239 (240)
++++
T Consensus 347 vv~~ 350 (350)
T cd08248 347 TVIK 350 (350)
T ss_pred EEeC
Confidence 8864
No 109
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.93 E-value=8.1e-25 Score=178.67 Aligned_cols=220 Identities=34% Similarity=0.424 Sum_probs=172.6
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|++|+.++.+.++++|++ ..++++++..+.|||+++.....+ .++++++|+|++|++|++++|+++..|+
T Consensus 93 ~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~-----~~~~~vlI~ga~g~ig~~~~~~a~~~g~ 165 (329)
T cd08250 93 FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEM-----KSGETVLVTAAAGGTGQFAVQLAKLAGC 165 (329)
T ss_pred CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCC-----CCCCEEEEEeCccHHHHHHHHHHHHcCC
Confidence 589999999999999999997 356778888999999999777777 8999999999999999999999999999
Q ss_pred EEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchH---
Q 045248 93 HVTASCGA-RNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSA--- 167 (240)
Q Consensus 93 ~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~--- 167 (240)
+|++++++ ++.+.++++|++.+++..+.+ ...+....++++|+++|++|+..+..++++++++|+++.+|.....
T Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~ 245 (329)
T cd08250 166 HVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSG 245 (329)
T ss_pred eEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCccc
Confidence 99998865 788888999998888766544 2222222346899999999987788999999999999999854321
Q ss_pred ------HHHHHHhhheeccceeeeEEEcC----CHHHHHHHHHHHHCCceEEe--cCceecchhHHHHHHHHHcCCCccc
Q 045248 168 ------MLTFALKKLTFSKKQLVPLLLIP----KRENLDFLVKLVKEGKLKTV--INSKHPLSKAEDAWAESIDGHATGK 235 (240)
Q Consensus 168 ------~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gk 235 (240)
...........++.++.+..... ..+.+.+++++++++.+.+. ..+.++++++++|++.+..+...+|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k 325 (329)
T cd08250 246 TGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGK 325 (329)
T ss_pred CcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCce
Confidence 00001112234555666654311 24567889999999998873 4456899999999999998888889
Q ss_pred EEEe
Q 045248 236 IIVE 239 (240)
Q Consensus 236 vvl~ 239 (240)
+|++
T Consensus 326 vvv~ 329 (329)
T cd08250 326 VVVE 329 (329)
T ss_pred EEeC
Confidence 9874
No 110
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.93 E-value=1.5e-24 Score=176.74 Aligned_cols=223 Identities=23% Similarity=0.318 Sum_probs=171.6
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHh--hhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHh
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQ--SAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKL 89 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~ 89 (240)
.+|+|++|+.++.+.++++|+++++++++.++..+++++.++.. ..+.. +++++++|+|++|++|++++|+|+.
T Consensus 94 ~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~----~~~~~vlI~ga~g~vg~~~~~~A~~ 169 (324)
T cd08288 94 HWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVT----PGDGPVLVTGAAGGVGSVAVALLAR 169 (324)
T ss_pred CCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcC----CCCCEEEEECCCcHHHHHHHHHHHH
Confidence 37999999999999999999999999999999998898877631 23331 3678999999889999999999999
Q ss_pred CCCEEEEEeC-cccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHH
Q 045248 90 GNTHVTASCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAM 168 (240)
Q Consensus 90 ~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~ 168 (240)
+|++|+++++ +++.+.++++|++.++++.+... .+......++|.++|++|+..+...+..++.+|+++.+|......
T Consensus 170 ~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~~ 248 (324)
T cd08288 170 LGYEVVASTGRPEEADYLRSLGASEIIDRAELSE-PGRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGAD 248 (324)
T ss_pred CCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhH-hhhhhccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCCC
Confidence 9999988885 58899999999999988764332 222223345899999999866677788889999999888532111
Q ss_pred HHHHHhhheeccceeeeEEEc-----CCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 169 LTFALKKLTFSKKQLVPLLLI-----PKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 169 ~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
.+.....+..++.++.+.... ...+.+..+.+++..+.+.+ +++.+++++++++++.+.+++..+|+|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 249 LPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA-LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred CCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc-cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 112222233566666665321 12346777888888888876 467999999999999999999999999874
No 111
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.93 E-value=9.7e-25 Score=178.56 Aligned_cols=216 Identities=21% Similarity=0.259 Sum_probs=170.4
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|+.++++.++++|+++++.+++.+ ..+.++++++ ...++ .++++++|+| +|.+|.+++++|+..|
T Consensus 112 ~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~-----~~g~~vlI~g-~g~vg~~~~~la~~~G 183 (334)
T cd08234 112 RNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGI-----KPGDSVLVFG-AGPIGLLLAQLLKLNG 183 (334)
T ss_pred CCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 5799999999999999999999999998766 6677899988 77888 8999999997 7999999999999999
Q ss_pred CE-EEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCch-H
Q 045248 92 TH-VTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPS-A 167 (240)
Q Consensus 92 ~~-v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~~-~ 167 (240)
++ |++++++ ++.+.++++|++.+++..+.+....+.+.++++|+++|++|. ..+..++++++++|+++.+|.... .
T Consensus 184 ~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 263 (334)
T cd08234 184 ASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDA 263 (334)
T ss_pred CcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCC
Confidence 96 7777754 788888999988888766544211134456789999999985 457888999999999999985432 1
Q ss_pred HHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 168 MLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 168 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
..++....+..++.++.+.. ...+.+++++++++++++.+ .++.++++++++++++.+.+ ...||+|+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 264 RVSISPFEIFQKELTIIGSF--INPYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred CcccCHHHHHhCCcEEEEec--cCHHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 12222222233555666654 35667899999999999874 35678999999999999998 67889886
No 112
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.93 E-value=1.7e-24 Score=175.41 Aligned_cols=217 Identities=19% Similarity=0.215 Sum_probs=169.5
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|++|+.++++.++++|+++ ..++.+...+.++++++. ..++ +++++++|+| +|++|++++|+|+.+|+
T Consensus 84 ~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~-----~~~~~vlI~g-~g~vg~~~~~la~~~g~ 154 (312)
T cd08269 84 GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWI-----RAGKTVAVIG-AGFIGLLFLQLAAAAGA 154 (312)
T ss_pred CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence 5899999999999999999998 233322366678999884 7777 8999999997 79999999999999999
Q ss_pred E-EEEEeCc-ccHHHHHhcCCCEEEeCCCCc-cc-cccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEeCCCchH
Q 045248 93 H-VTASCGA-RNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDITPGPSA 167 (240)
Q Consensus 93 ~-v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~ 167 (240)
+ |+++.++ ++.+.++++|++.+++..... .. ..+.+.+.++|+++||+|+. .+..++++++++|+++.+|.....
T Consensus 155 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~ 234 (312)
T cd08269 155 RRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDG 234 (312)
T ss_pred cEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC
Confidence 7 9888865 678888999998888755433 22 23445667899999999864 478899999999999999865322
Q ss_pred HHHHHHhhheeccceeeeEEEc---CCHHHHHHHHHHHHCCceEE--ecCceecchhHHHHHHHHHcCCC-cccEEE
Q 045248 168 MLTFALKKLTFSKKQLVPLLLI---PKRENLDFLVKLVKEGKLKT--VINSKHPLSKAEDAWAESIDGHA-TGKIIV 238 (240)
Q Consensus 168 ~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~-~gkvvl 238 (240)
...+....+.+++.++.++... ...+.+++++++++++.+.+ .+++.+++++++++++.+.+++. .+|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 235 PRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred CcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 2333334566777777665431 22468999999999999886 46678999999999999998864 578876
No 113
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.93 E-value=1.9e-24 Score=175.64 Aligned_cols=227 Identities=23% Similarity=0.354 Sum_probs=178.8
Q ss_pred ccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHH
Q 045248 9 VSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAK 88 (240)
Q Consensus 9 ~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~ 88 (240)
+...+|+|++|+.+++..++++|+++++.++++++..+.++|+++.....+ .++++++|+|++|++|.+++++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~-----~~~~~vlv~g~~~~~g~~~~~~a~ 161 (325)
T TIGR02824 87 ALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGL-----KAGETVLIHGGASGIGTTAIQLAK 161 (325)
T ss_pred EccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCC-----CCCCEEEEEcCcchHHHHHHHHHH
Confidence 333458999999999999999999999999999999999999998777888 899999999999999999999999
Q ss_pred hCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCc--cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCc
Q 045248 89 LGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 89 ~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~ 165 (240)
.+|++|++++++ ++.+.++++|.+.+++....+ ........++++|+++|++|+..+..++++++++|+++.+|...
T Consensus 162 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
T TIGR02824 162 AFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQG 241 (325)
T ss_pred HcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCC
Confidence 999999988864 677788889988777655433 12223344568999999999877888999999999999998543
Q ss_pred hHHHHHHHhhheeccceeeeEEEcC---------CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccE
Q 045248 166 SAMLTFALKKLTFSKKQLVPLLLIP---------KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKI 236 (240)
Q Consensus 166 ~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 236 (240)
..........+..++.++.+..... ..+.+.+++++++++.+.+..++.+++++++++++.+.++...+|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (325)
T TIGR02824 242 GRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKI 321 (325)
T ss_pred CCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceE
Confidence 2111122222235566666654311 1234567788999999887788899999999999999988888999
Q ss_pred EEeC
Q 045248 237 IVEP 240 (240)
Q Consensus 237 vl~~ 240 (240)
++++
T Consensus 322 v~~~ 325 (325)
T TIGR02824 322 VLTV 325 (325)
T ss_pred EEeC
Confidence 9864
No 114
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.93 E-value=2.2e-24 Score=175.18 Aligned_cols=223 Identities=28% Similarity=0.429 Sum_probs=177.5
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|++++|+.++++.++++|+++++++++.+++.+.+||+++....++ .++++++|+|++|++|++++++++.+|
T Consensus 95 ~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~-----~~g~~vlI~g~~~~~g~~~~~~a~~~g 169 (325)
T cd08253 95 RQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGA-----KAGETVLVHGGSGAVGHAAVQLARWAG 169 (325)
T ss_pred CCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCC-----CCCCEEEEEcCCchHHHHHHHHHHHcC
Confidence 378999999999999999999999999999999999999999777888 899999999999999999999999999
Q ss_pred CEEEEEeCc-ccHHHHHhcCCCEEEeCCCCcc-c-cccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHH
Q 045248 92 THVTASCGA-RNIEFVKSLGADEVLDYKTPDG-A-ALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAM 168 (240)
Q Consensus 92 ~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~-~-~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~ 168 (240)
++|++++++ ++.+.++++|++.+++....+. . ..+.+.++++|+++|++|+......+++++++|+++.++.... .
T Consensus 170 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~ 248 (325)
T cd08253 170 ARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGL-R 248 (325)
T ss_pred CEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCC-c
Confidence 999999874 7788888899988887665442 2 2233455689999999998777888899999999999986431 1
Q ss_pred HHHHHhhheeccceeeeEEEc-CC----HHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 169 LTFALKKLTFSKKQLVPLLLI-PK----RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 169 ~~~~~~~~~~~~~~i~~~~~~-~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
.......+..++.++.+.... .. .+.++.+.+++..+.+++..++.+++++++++++.+.++...||+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 249 GTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred CCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 111122222334444443321 11 2356677788888988877888999999999999999988899999875
No 115
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=8e-24 Score=172.26 Aligned_cols=224 Identities=34% Similarity=0.487 Sum_probs=180.7
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|+.++++.++++|+++++.+++.+++.+.++++++.+..++ .++++++|+|++|++|++++++++..|
T Consensus 92 ~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~-----~~g~~vlI~g~~~~ig~~~~~~a~~~g 166 (325)
T cd08271 92 RGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRI-----EAGRTILITGGAGGVGSFAVQLAKRAG 166 (325)
T ss_pred CCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCC-----CCCCEEEEECCccHHHHHHHHHHHHcC
Confidence 368999999999999999999999999999999999999999787877 899999999988899999999999999
Q ss_pred CEEEEEeCcccHHHHHhcCCCEEEeCCCCc-c-ccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchH-H
Q 045248 92 THVTASCGARNIEFVKSLGADEVLDYKTPD-G-AALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSA-M 168 (240)
Q Consensus 92 ~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~-~ 168 (240)
++|+++.++++.+.++++|++.+++..... . .......++++|.+++++++......+++++++|+++.++..... .
T Consensus 167 ~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~ 246 (325)
T cd08271 167 LRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDASP 246 (325)
T ss_pred CEEEEEEcHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCCcc
Confidence 998888766777888899998888765544 2 223344567899999999987767789999999999988743221 1
Q ss_pred HHHHHhhheeccceeeeEEEcC-------CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 169 LTFALKKLTFSKKQLVPLLLIP-------KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 169 ~~~~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
.......+.+++.++....... ..+.+.+++++++++.+.+..++.++++++.++++.+.++...+|+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 247 DPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred hhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 2223345566666665543211 12456788999999999887778899999999999999888889999874
No 116
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.93 E-value=1e-23 Score=170.29 Aligned_cols=214 Identities=34% Similarity=0.517 Sum_probs=174.8
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|++|+.+++..++++|+++++.+++.++..+.++++++.....+ .++++++|+|++|++|++++++++..|+
T Consensus 96 ~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~vlv~g~~g~~g~~~~~~a~~~g~ 170 (309)
T cd05289 96 GGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGL-----KAGQTVLIHGAAGGVGSFAVQLAKARGA 170 (309)
T ss_pred CCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCC-----CCCCEEEEecCCchHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999999999999666667 7899999999889999999999999999
Q ss_pred EEEEEeCcccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHHHHHH
Q 045248 93 HVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAMLTFA 172 (240)
Q Consensus 93 ~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~ 172 (240)
+|++++++++.+.++++|.+.+++....+... ...+.++|.++|++|+.....++++++++|+++.+|.......
T Consensus 171 ~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~--- 245 (309)
T cd05289 171 RVIATASAANADFLRSLGADEVIDYTKGDFER--AAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPPAEQ--- 245 (309)
T ss_pred EEEEEecchhHHHHHHcCCCEEEeCCCCchhh--ccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCcchh---
Confidence 99888865578888899988888765543222 4455689999999998888889999999999999986443211
Q ss_pred HhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 173 LKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 173 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
....++.++......+..+.+.+++++++++.+.+.+++.+++++++++++.+..+...+|+|+
T Consensus 246 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 246 --AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred --hhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 1122333333333223367899999999999998888899999999999999998887788774
No 117
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=4.8e-24 Score=173.50 Aligned_cols=219 Identities=30% Similarity=0.495 Sum_probs=176.6
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|++|+.+++..++++|+++++.+++.++..+.+||+++.+..++ .++++++|+|++|++|++++++++.+|+
T Consensus 96 ~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~-----~~~~~vli~g~~~~~g~~~~~~a~~~g~ 170 (326)
T cd08272 96 QGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAV-----QAGQTVLIHGGAGGVGHVAVQLAKAAGA 170 (326)
T ss_pred CCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCC-----CCCCEEEEEcCCCcHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999999999998777888 8999999999999999999999999999
Q ss_pred EEEEEeCcccHHHHHhcCCCEEEeCCCCc-cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHHHHH
Q 045248 93 HVTASCGARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAMLTF 171 (240)
Q Consensus 93 ~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~ 171 (240)
+|++++++++.+.++++|.+.+++..... ....+.+.+.++|+++|++|+.....++++++++|+++.++........
T Consensus 171 ~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~- 249 (326)
T cd08272 171 RVYATASSEKAAFARSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGATHDLA- 249 (326)
T ss_pred EEEEEechHHHHHHHHcCCCEEEecchhHHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecCCccchh-
Confidence 99988866778888899998887755431 1123345567899999999987788899999999999998754311111
Q ss_pred HHhhheeccceeeeEEEc----------CCHHHHHHHHHHHHCCceEEecC-ceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 172 ALKKLTFSKKQLVPLLLI----------PKRENLDFLVKLVKEGKLKTVIN-SKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 172 ~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
....++.++.+.... ...+.+.++++++.++.+.+.++ +.+++++++++++.+.++...+|+|+++
T Consensus 250 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 250 ---PLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ---hHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 111344444444321 12456888999999999987766 8999999999999999888789999874
No 118
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.93 E-value=5e-24 Score=174.06 Aligned_cols=220 Identities=28% Similarity=0.348 Sum_probs=170.3
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|+.++++.++++|+++++++++.++..+.+||+++....++ .++++++|+|++|++|++++++++.+|
T Consensus 90 ~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~-----~~g~~vlI~g~~g~ig~~~~~~a~~~g 164 (331)
T cd08273 90 RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKV-----LTGQRVLIHGASGGVGQALLELALLAG 164 (331)
T ss_pred CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCC-----CCCCEEEEECCCcHHHHHHHHHHHHcC
Confidence 358999999999999999999999999999999999999999777777 899999999988999999999999999
Q ss_pred CEEEEEeCcccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHH---
Q 045248 92 THVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAM--- 168 (240)
Q Consensus 92 ~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~--- 168 (240)
++|++++++++.+.++++|+.. ++....+.... ...++++|+++|++|+..+..++++++++|+++.+|......
T Consensus 165 ~~v~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~-~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~ 242 (331)
T cd08273 165 AEVYGTASERNHAALRELGATP-IDYRTKDWLPA-MLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQGR 242 (331)
T ss_pred CEEEEEeCHHHHHHHHHcCCeE-EcCCCcchhhh-hccCCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCCcc
Confidence 9999888866788888899754 44433331111 233458999999999877889999999999999998543211
Q ss_pred HHHHH----------hhheeccceeeeEEEc--------CCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcC
Q 045248 169 LTFAL----------KKLTFSKKQLVPLLLI--------PKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDG 230 (240)
Q Consensus 169 ~~~~~----------~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~ 230 (240)
..+.+ ................ ...+.+.+++++++++.+.+.+++++++++++++++.+.++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~ 322 (331)
T cd08273 243 RSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESG 322 (331)
T ss_pred ccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcC
Confidence 11000 0011122222222210 11457889999999999988788899999999999999988
Q ss_pred CCcccEEE
Q 045248 231 HATGKIIV 238 (240)
Q Consensus 231 ~~~gkvvl 238 (240)
...||+|+
T Consensus 323 ~~~gkvv~ 330 (331)
T cd08273 323 KVVGKIVL 330 (331)
T ss_pred CCcceEEe
Confidence 88889886
No 119
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.92 E-value=2.9e-24 Score=171.81 Aligned_cols=221 Identities=28% Similarity=0.374 Sum_probs=174.4
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|+||+.++.+.++++|+++++.+++.+++.+.+++.++.+..++ ++|++++|+|++|++|++++|+++.+|+
T Consensus 60 ~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~g~~vlv~g~~g~~g~~~~~~a~~~g~ 134 (293)
T cd05195 60 PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARL-----QKGESVLIHAAAGGVGQAAIQLAQHLGA 134 (293)
T ss_pred cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhcc-----CCCCEEEEecCCCHHHHHHHHHHHHcCC
Confidence 58999999999999999999999999999999999999999777888 8999999999899999999999999999
Q ss_pred EEEEEeCc-ccHHHHHhcC--CCEEEeCCCCc--cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchH
Q 045248 93 HVTASCGA-RNIEFVKSLG--ADEVLDYKTPD--GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSA 167 (240)
Q Consensus 93 ~v~~~~~~-~~~~~~~~~g--~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~ 167 (240)
+|++++++ ++.+.+++.| ++.+++..+.+ ....+.+.++++|+++|++|+..+..++++++++|+++.+|.....
T Consensus 135 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~ 214 (293)
T cd05195 135 EVFATVGSEEKREFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDIL 214 (293)
T ss_pred EEEEEeCCHHHHHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccc
Confidence 99999865 7888888888 67777765433 1223344567899999999988888999999999999998854321
Q ss_pred ---H--HHHHHhhheeccceeeeEEE---cCCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 168 ---M--LTFALKKLTFSKKQLVPLLL---IPKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 168 ---~--~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
. .....+...++...+..... ....+.+.++++++.++++++..++.+++++++++++.+..+...+|+|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 215 SNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred cCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 1 11111222333333222211 01134678899999999998888889999999999999998887788764
No 120
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.92 E-value=2.9e-24 Score=171.53 Aligned_cols=220 Identities=26% Similarity=0.366 Sum_probs=171.8
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.+...+ .++++|+|+|++|++|++++++++.+|+
T Consensus 56 ~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~g~~vlv~g~~~~~g~~~~~~a~~~g~ 130 (288)
T smart00829 56 PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARL-----RPGESVLIHAAAGGVGQAAIQLAQHLGA 130 (288)
T ss_pred CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCC-----CCCCEEEEecCCcHHHHHHHHHHHHcCC
Confidence 58999999999999999999999999999999999999998777777 8999999999999999999999999999
Q ss_pred EEEEEeC-cccHHHHHhcCC--CEEEeCCCCcc-c-cccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchH
Q 045248 93 HVTASCG-ARNIEFVKSLGA--DEVLDYKTPDG-A-ALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSA 167 (240)
Q Consensus 93 ~v~~~~~-~~~~~~~~~~g~--~~v~~~~~~~~-~-~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~ 167 (240)
+|+++++ +++.+.++++|+ +.++++.+.+. . ..+...++++|.++|++|+.....++++++++|+++.+|.....
T Consensus 131 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~ 210 (288)
T smart00829 131 EVFATAGSPEKRDFLRELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIR 210 (288)
T ss_pred EEEEEeCCHHHHHHHHHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCc
Confidence 9999996 478888899998 67777655442 2 22344556899999999976688899999999999999854210
Q ss_pred -HHHHHHhhheeccceeeeEEE-----cC--CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 168 -MLTFALKKLTFSKKQLVPLLL-----IP--KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 168 -~~~~~~~~~~~~~~~i~~~~~-----~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
........ ..++.++..... .+ ..+.+.++++++.++++.+...+.+++++++++++.+..+...+|+++
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 211 DNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred cccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 01111111 122233333221 01 134577888999999887766678999999999999998877788764
No 121
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.92 E-value=1.3e-23 Score=170.50 Aligned_cols=222 Identities=30% Similarity=0.410 Sum_probs=177.0
Q ss_pred CcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC
Q 045248 13 GGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT 92 (240)
Q Consensus 13 ~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~ 92 (240)
.|++++|+.++++.++++|++++..+++.++..+.+|++++.....+ .++++++|+|++|++|++++++++..|+
T Consensus 91 ~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~vli~g~~~~~g~~~~~~a~~~g~ 165 (323)
T cd08241 91 QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARL-----QPGETVLVLGAAGGVGLAAVQLAKALGA 165 (323)
T ss_pred CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCC-----CCCCEEEEEcCCchHHHHHHHHHHHhCC
Confidence 68999999999999999999999999988888999999998767777 7899999999889999999999999999
Q ss_pred EEEEEeCc-ccHHHHHhcCCCEEEeCCCCcc--ccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHHH
Q 045248 93 HVTASCGA-RNIEFVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAML 169 (240)
Q Consensus 93 ~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~ 169 (240)
+|+.++++ ++.+.++++|++.+++....+. .....+.+.++|.++|++|+..+..++++++++|+++.+|.......
T Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 245 (323)
T cd08241 166 RVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGEIP 245 (323)
T ss_pred EEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCCCcC
Confidence 99998864 7888888999888887655442 22334455689999999998778889999999999999885322111
Q ss_pred HHHHhhheeccceeeeEEEcC--------CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEe
Q 045248 170 TFALKKLTFSKKQLVPLLLIP--------KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVE 239 (240)
Q Consensus 170 ~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~ 239 (240)
.+.......++.++.+..... ..+.+.++++++.++.+.+..+..|+++++.++++.+.++...+|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 246 QIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred cCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 011112234555555544211 1356788999999999987788899999999999999988878898864
No 122
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.92 E-value=2.1e-23 Score=169.76 Aligned_cols=224 Identities=26% Similarity=0.335 Sum_probs=174.7
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|++++|+.++++.++++|+++++++++.++..+.++|+++.....+ .++++++|+|++|++|++++++++..|
T Consensus 95 ~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~vli~g~~~~~g~~~~~~~~~~g 169 (328)
T cd08268 95 QYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGL-----RPGDSVLITAASSSVGLAAIQIANAAG 169 (328)
T ss_pred CCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCC-----CCCCEEEEecCccHHHHHHHHHHHHcC
Confidence 358999999999999999999999999999999999999999777777 789999999988999999999999999
Q ss_pred CEEEEEeCc-ccHHHHHhcCCCEEEeCCCCcc--ccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCchHH
Q 045248 92 THVTASCGA-RNIEFVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGPSAM 168 (240)
Q Consensus 92 ~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~ 168 (240)
+++++++++ ++.+.++++|.+.+++...... .......+.++|++++++|+.....++++++++|+++.+|......
T Consensus 170 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~ 249 (328)
T cd08268 170 ATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSGEP 249 (328)
T ss_pred CEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCCCC
Confidence 999998864 7788888899888887655431 2233344568999999999877888999999999999987543211
Q ss_pred HHHHHhhheeccceeeeEEEc---CC----HHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEEeC
Q 045248 169 LTFALKKLTFSKKQLVPLLLI---PK----RENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 169 ~~~~~~~~~~~~~~i~~~~~~---~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl~~ 240 (240)
..........++..+.+.... .. ...++.+.+++..+.+.+..+..+++++++++++.+..+...+|+|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 250 TPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred CCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 111112123444444444321 11 2345666677778888877778899999999999999888888999874
No 123
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.91 E-value=1.7e-23 Score=167.00 Aligned_cols=210 Identities=22% Similarity=0.241 Sum_probs=160.6
Q ss_pred cccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCE
Q 045248 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTH 93 (240)
Q Consensus 14 G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~ 93 (240)
++|++|+.++++.++++|+++++++++++ ..+.+||+++ ...++ .++++++|+| +|++|++++++|+.+|++
T Consensus 52 ~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~-----~~g~~vlI~g-~g~vg~~~i~~a~~~g~~ 123 (277)
T cd08255 52 GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEP-----RLGERVAVVG-LGLVGLLAAQLAKAAGAR 123 (277)
T ss_pred CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCC
Confidence 47999999999999999999999999888 7889999998 56777 8999999997 799999999999999997
Q ss_pred -EEEEeCc-ccHHHHHhcC-CCEEEeCCCCccccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCchHHH
Q 045248 94 -VTASCGA-RNIEFVKSLG-ADEVLDYKTPDGAALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGPSAML 169 (240)
Q Consensus 94 -v~~~~~~-~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~ 169 (240)
|++++++ ++.+.++++| ++.+++..+ ....+.++|+++|++|. ......+++++++|+++.+|......
T Consensus 124 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~- 196 (277)
T cd08255 124 EVVGVDPDAARRELAEALGPADPVAADTA------DEIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKP- 196 (277)
T ss_pred cEEEECCCHHHHHHHHHcCCCccccccch------hhhcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCc-
Confidence 9999864 7888889999 555543321 11245689999999886 44788999999999999998643221
Q ss_pred HHHHhhheeccceeeeEEEc-----------CCHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcC-CCcccEE
Q 045248 170 TFALKKLTFSKKQLVPLLLI-----------PKRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDG-HATGKII 237 (240)
Q Consensus 170 ~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvv 237 (240)
......+..+..++.+.... ...+.++++++++.++.+++.+.+.+++++++++++.+.++ ....|++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~ 276 (277)
T cd08255 197 LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVV 276 (277)
T ss_pred cccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeee
Confidence 00111122223233332210 12357899999999999988888899999999999999877 3445765
Q ss_pred E
Q 045248 238 V 238 (240)
Q Consensus 238 l 238 (240)
+
T Consensus 277 ~ 277 (277)
T cd08255 277 L 277 (277)
T ss_pred C
Confidence 3
No 124
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.91 E-value=4.9e-23 Score=168.41 Aligned_cols=229 Identities=28% Similarity=0.316 Sum_probs=173.9
Q ss_pred ecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHH
Q 045248 7 IDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQL 86 (240)
Q Consensus 7 ~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~ 86 (240)
+.+....|+|++|+.++.+.++++|+++++++++.++..+.++|+++....++ +++++|+|+|++|++|++++++
T Consensus 84 V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~vli~g~~g~~g~~~~~~ 158 (337)
T cd08275 84 VMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNL-----RPGQSVLVHSAAGGVGLAAGQL 158 (337)
T ss_pred EEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCC-----CCCCEEEEEcCcchHHHHHHHH
Confidence 33433458999999999999999999999999999999999999998778887 8999999999889999999999
Q ss_pred HHhC-CCEEEEEeCcccHHHHHhcCCCEEEeCCCCc-cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 87 AKLG-NTHVTASCGARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 87 a~~~-g~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
++.. +..++....+++.+.++++|++.+++....+ ...+....++++|+++|++|+.....++++++++|+++.+|..
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~ 238 (337)
T cd08275 159 CKTVPNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAA 238 (337)
T ss_pred HHHccCcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeec
Confidence 9998 3333333233477888889998888766544 2222222246799999999987788899999999999999854
Q ss_pred chH---HHH-------------HHHhhheeccceeeeEEEc----CC---HHHHHHHHHHHHCCceEEecCceecchhHH
Q 045248 165 PSA---MLT-------------FALKKLTFSKKQLVPLLLI----PK---RENLDFLVKLVKEGKLKTVINSKHPLSKAE 221 (240)
Q Consensus 165 ~~~---~~~-------------~~~~~~~~~~~~i~~~~~~----~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 221 (240)
... ... ........++.++.+.... .. ...+.++++++.++.+.+..+..|++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (337)
T cd08275 239 NLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVG 318 (337)
T ss_pred CCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHH
Confidence 311 010 0112233455555554321 11 234778889999999887777899999999
Q ss_pred HHHHHHHcCCCcccEEEeC
Q 045248 222 DAWAESIDGHATGKIIVEP 240 (240)
Q Consensus 222 ~a~~~~~~~~~~gkvvl~~ 240 (240)
++++.+.++...+|+++++
T Consensus 319 ~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 319 EAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHcCCCcceEEEeC
Confidence 9999999888889999875
No 125
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.91 E-value=3.7e-23 Score=167.24 Aligned_cols=185 Identities=20% Similarity=0.288 Sum_probs=150.7
Q ss_pred CCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC
Q 045248 12 NGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN 91 (240)
Q Consensus 12 ~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g 91 (240)
..|+|++|++++++.++++|+++++++++ ++..+.++|+++.....+ +++++|+|.| +|++|.+++|+|+.+|
T Consensus 116 ~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~-----~~g~~vlI~g-~g~~g~~~~~la~~~G 188 (306)
T cd08258 116 ADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGI-----RPGDTVVVFG-PGPIGLLAAQVAKLQG 188 (306)
T ss_pred CCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 46999999999999999999999999887 666777999998788888 8999999977 8999999999999999
Q ss_pred CEEEEEeC--c-ccHHHHHhcCCCEEEeCCCCcc-c-cccCCCCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCc
Q 045248 92 THVTASCG--A-RNIEFVKSLGADEVLDYKTPDG-A-ALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 92 ~~v~~~~~--~-~~~~~~~~~g~~~v~~~~~~~~-~-~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~ 165 (240)
++|+++.. + ++.+.++++|++.+ ++...+. . ......+.++|+++|++|+ ..+...+++++++|+++.+|...
T Consensus 189 ~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 267 (306)
T cd08258 189 ATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFG 267 (306)
T ss_pred CEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccC
Confidence 99887743 3 46778889999877 6655442 2 2233456789999999986 45788999999999999998754
Q ss_pred hHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCC
Q 045248 166 SAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEG 205 (240)
Q Consensus 166 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 205 (240)
.....++...+.++++++.+++. .+.++++++++++++|
T Consensus 268 ~~~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 268 PLAASIDVERIIQKELSVIGSRS-STPASWETALRLLASG 306 (306)
T ss_pred CCCcccCHHHHhhcCcEEEEEec-CchHhHHHHHHHHhcC
Confidence 22344455666789999999885 6788899999999875
No 126
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.90 E-value=9.1e-23 Score=161.76 Aligned_cols=193 Identities=28% Similarity=0.343 Sum_probs=153.5
Q ss_pred cccceecccCCCcccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHH
Q 045248 2 CNLWRIDVSHNGGGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGH 81 (240)
Q Consensus 2 c~~~~~~~~~~~G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~ 81 (240)
|....+.+....|+|++|+.++++.++++|+++++++++.++..+.+||+++.....+ .++++|+|+|+++ +|+
T Consensus 75 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~-----~~~~~vli~g~~~-~G~ 148 (271)
T cd05188 75 CPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVL-----KPGDTVLVLGAGG-VGL 148 (271)
T ss_pred CCCCCEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCC-----CCCCEEEEECCCH-HHH
Confidence 4444455556689999999999999999999999999999999999999999777766 7899999999655 999
Q ss_pred HHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCcc-ccccCCCCCcccEEEeCCCC-CCccccccCCCCCcEE
Q 045248 82 YAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVIHCATG-IPWSTFEPNLGTNGKV 158 (240)
Q Consensus 82 ~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~i 158 (240)
+++++++..|.+|++++++ ++.+.++++|++.+++..+.+. ..+....+.++|+++|++|. ..+..++++++++|++
T Consensus 149 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~ 228 (271)
T cd05188 149 LAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRI 228 (271)
T ss_pred HHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEE
Confidence 9999999999999999975 7888889999888887665442 21114456789999999998 6688899999999999
Q ss_pred EEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHH
Q 045248 159 IDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKL 201 (240)
Q Consensus 159 v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 201 (240)
+.++................++.++.++.. ....++++++++
T Consensus 229 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 270 (271)
T cd05188 229 VVVGGTSGGPPLDDLRRLLFKELTIIGSTG-GTREDFEEALDL 270 (271)
T ss_pred EEEccCCCCCCcccHHHHHhcceEEEEeec-CCHHHHHHHHhh
Confidence 999865432222223345677888888764 566677777765
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.78 E-value=7.1e-20 Score=129.66 Aligned_cols=126 Identities=27% Similarity=0.362 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCc-ccc-ccCCCCCcccEEEeCCCC-CCccccccCCC
Q 045248 78 GVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPD-GAA-LKSPSGRKYDAVIHCATG-IPWSTFEPNLG 153 (240)
Q Consensus 78 ~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~-~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~ 153 (240)
|+|++++|+|+++|++|++++++ ++++.++++|++.++++++.+ ... .+.+++.++|+||||+|. ..++.++++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~ 80 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR 80 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence 68999999999999999999975 799999999999999998876 333 345566799999999995 66999999999
Q ss_pred CCcEEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHC
Q 045248 154 TNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKE 204 (240)
Q Consensus 154 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 204 (240)
++|+++.+|.......+++...+.++++++.+++. .++++++++++++++
T Consensus 81 ~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 81 PGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWG-GSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESS-GGHHHHHHHHHHHH-
T ss_pred cCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEcc-CCHHHHHHHHHHhcC
Confidence 99999999987655666778888999999999875 568999999999864
No 128
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.71 E-value=1.3e-17 Score=117.46 Aligned_cols=120 Identities=34% Similarity=0.458 Sum_probs=80.0
Q ss_pred cCCCEEEeCCCCccccccCCCCCcccEEEeCCC--CCC-ccccccCCCCCcEEEEeCCCchHHHHHHHhhheeccceeee
Q 045248 109 LGADEVLDYKTPDGAALKSPSGRKYDAVIHCAT--GIP-WSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVP 185 (240)
Q Consensus 109 ~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g--~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~ 185 (240)
||+++++|++..+. ..+.+||+|||++| .+. +..++++| ++|+++.++. .-........ ....+...
T Consensus 1 LGAd~vidy~~~~~-----~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~~~~~~~~~~---~~~~~~~~ 70 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-----AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-DLPSFARRLK---GRSIRYSF 70 (127)
T ss_dssp CT-SEEEETTCSHH-----HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-HHHHHHHHHH---CHHCEEEC
T ss_pred CCcCEEecCCCccc-----cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-cccchhhhhc---ccceEEEE
Confidence 69999999985444 45689999999999 544 47888999 9999999985 1111111111 11111111
Q ss_pred EE-EcC---CHHHHHHHHHHHHCCceEEecCceecchhHHHHHHHHHcCCCcccEEE
Q 045248 186 LL-LIP---KRENLDFLVKLVKEGKLKTVINSKHPLSKAEDAWAESIDGHATGKIIV 238 (240)
Q Consensus 186 ~~-~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvl 238 (240)
.. ..+ ..+.++++.+++++|++++.+.++||++++++|++.+.+++..||+||
T Consensus 71 ~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 71 LFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred EEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 11 011 345699999999999999999999999999999999999999999996
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.56 E-value=2.9e-14 Score=117.77 Aligned_cols=161 Identities=13% Similarity=0.046 Sum_probs=123.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 143 (240)
-+|++|+|.| .|++|+.+++.++.+|++|+++.. +.|.+.++++|++.+ +.. ..+ .++|+|++++|..
T Consensus 200 l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~~~----e~v-----~~aDVVI~atG~~ 268 (413)
T cd00401 200 IAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-TME----EAV-----KEGDIFVTTTGNK 268 (413)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-cHH----HHH-----cCCCEEEECCCCH
Confidence 4899999999 999999999999999999999885 478899999998533 211 111 3589999999975
Q ss_pred C-cccc-ccCCCCCcEEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHH--HHHHHHHCCce---EEecCce--
Q 045248 144 P-WSTF-EPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLD--FLVKLVKEGKL---KTVINSK-- 214 (240)
Q Consensus 144 ~-~~~~-~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~i---~~~~~~~-- 214 (240)
. +... ++.++++|+++.+|... .+++...+..++.++.++........++ +.++++++|++ .+.++|.
T Consensus 269 ~~i~~~~l~~mk~GgilvnvG~~~---~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~~~ 345 (413)
T cd00401 269 DIITGEHFEQMKDGAIVCNIGHFD---VEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCATGHPSF 345 (413)
T ss_pred HHHHHHHHhcCCCCcEEEEeCCCC---CccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCcccCCCccc
Confidence 5 6655 89999999999999652 3455666667788888775322222456 79999999988 4577788
Q ss_pred ---ecch-hHHHHHHHHHcCCC-cccEEEe
Q 045248 215 ---HPLS-KAEDAWAESIDGHA-TGKIIVE 239 (240)
Q Consensus 215 ---~~~~-~~~~a~~~~~~~~~-~gkvvl~ 239 (240)
++|+ ++.++++.+.+++. .-|+++.
T Consensus 346 vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~ 375 (413)
T cd00401 346 VMSNSFTNQVLAQIELWTNRDKYEVGVYFL 375 (413)
T ss_pred eechhHHHHHHHHHHHHhcCCcCCCcEEEC
Confidence 8999 99999999987653 2466654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.45 E-value=9.6e-13 Score=111.52 Aligned_cols=142 Identities=18% Similarity=0.159 Sum_probs=104.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHHHhcCCCEE-EeCCCCcc--c--c-----------ccC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEV-LDYKTPDG--A--A-----------LKS 127 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v-~~~~~~~~--~--~-----------~~~ 127 (240)
.++++|+|+| +|++|+++++.|+.+|++|++++. +++++.++++|++.+ ++..+.+. . . .+.
T Consensus 163 ~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 5899999999 999999999999999999999995 589999999999844 55433210 0 0 000
Q ss_pred CC--CCcccEEEeCCCCC------C-ccccccCCCCCcEEEEeCCCchH--HHHHHHhhhee-ccceeeeEEEcCCHHHH
Q 045248 128 PS--GRKYDAVIHCATGI------P-WSTFEPNLGTNGKVIDITPGPSA--MLTFALKKLTF-SKKQLVPLLLIPKRENL 195 (240)
Q Consensus 128 ~~--~~~~d~v~d~~g~~------~-~~~~~~~l~~~G~iv~~g~~~~~--~~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 195 (240)
.. ..++|++|+|+|.+ . .+++++.++++|+++.++..... ..+.+...+.. +++++.+.+..+ .+..
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P-~~~p 320 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP-SRLP 320 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc-hhHH
Confidence 01 15799999999952 2 38899999999999999864222 23333445554 788999876433 3444
Q ss_pred HHHHHHHHCCceE
Q 045248 196 DFLVKLVKEGKLK 208 (240)
Q Consensus 196 ~~~~~~~~~~~i~ 208 (240)
.++.+++.++.+.
T Consensus 321 ~~As~lla~~~i~ 333 (509)
T PRK09424 321 TQSSQLYGTNLVN 333 (509)
T ss_pred HHHHHHHHhCCcc
Confidence 4699999998875
No 131
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.66 E-value=5.2e-08 Score=77.58 Aligned_cols=164 Identities=13% Similarity=0.094 Sum_probs=93.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC--EEEEEeC-cccHHHHHh----cCCCEEEeCCCCccccccCCCCCcccEEE
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT--HVTASCG-ARNIEFVKS----LGADEVLDYKTPDGAALKSPSGRKYDAVI 137 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~--~v~~~~~-~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~d~v~ 137 (240)
+++++||.+| +|+ |..++++++..|. +|++++. ++..+.+++ .|...+ .....+...+. .....||+|+
T Consensus 76 ~~g~~VLDiG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~d~~~l~-~~~~~fD~Vi 151 (272)
T PRK11873 76 KPGETVLDLG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLGEIEALP-VADNSVDVII 151 (272)
T ss_pred CCCCEEEEeC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEcchhhCC-CCCCceeEEE
Confidence 7999999999 677 8888888887775 7999985 466666654 343222 11111111111 1235799998
Q ss_pred eCCC-----C--CCccccccCCCCCcEEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCc---e
Q 045248 138 HCAT-----G--IPWSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGK---L 207 (240)
Q Consensus 138 d~~g-----~--~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---i 207 (240)
.... . ..+..+.+.|+++|+++..+........... .+...+.+... .......++.+++++.. +
T Consensus 152 ~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~e~~~~l~~aGf~~v 226 (272)
T PRK11873 152 SNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGELPEEI----RNDAELYAGCV-AGALQEEEYLAMLAEAGFVDI 226 (272)
T ss_pred EcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCCCHHH----HHhHHHHhccc-cCCCCHHHHHHHHHHCCCCce
Confidence 5432 1 2378899999999999887643221111000 11111111111 11122344556666532 3
Q ss_pred EEecCceecchhHHHHHHHH--HcCCCcccEE
Q 045248 208 KTVINSKHPLSKAEDAWAES--IDGHATGKII 237 (240)
Q Consensus 208 ~~~~~~~~~~~~~~~a~~~~--~~~~~~gkvv 237 (240)
.......+++++..++++.+ .++...++.+
T Consensus 227 ~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 227 TIQPKREYRIPDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred EEEeccceecccHHHHHHHhccccccccCceE
Confidence 34455678899999999888 5555445444
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.44 E-value=5.7e-07 Score=76.60 Aligned_cols=99 Identities=21% Similarity=0.225 Sum_probs=73.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHHHhcCCCEE-EeCCCCc---------------cccccC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEV-LDYKTPD---------------GAALKS 127 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v-~~~~~~~---------------~~~~~~ 127 (240)
.++.+++|.| +|.+|+++++.++.+|++|++.+. +++++.++++|++.+ ++..+.. ..+.+.
T Consensus 162 vp~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 4679999999 899999999999999999988885 478999999998753 2321100 000111
Q ss_pred C--CCCcccEEEeCC---CC--C--CccccccCCCCCcEEEEeCCC
Q 045248 128 P--SGRKYDAVIHCA---TG--I--PWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 128 ~--~~~~~d~v~d~~---g~--~--~~~~~~~~l~~~G~iv~~g~~ 164 (240)
. ...++|++|+|+ |. + ..+..++.+++|+.|+.+...
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 1 135699999999 64 2 256778999999999988643
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.44 E-value=1.9e-06 Score=72.11 Aligned_cols=103 Identities=13% Similarity=0.023 Sum_probs=75.4
Q ss_pred HHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCcccccc
Q 045248 48 TAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALK 126 (240)
Q Consensus 48 ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~ 126 (240)
.+|.++.+..++. -.|++|+|+| .|.+|..+++.++.+|++|++++.+ .+...+...|.. +.+. ....
T Consensus 197 s~~~ai~rat~~~----l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~l----~eal- 265 (425)
T PRK05476 197 SLLDGIKRATNVL----IAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMTM----EEAA- 265 (425)
T ss_pred hhHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecCH----HHHH-
Confidence 4455554443442 3899999999 8999999999999999999998864 565666666754 2211 1111
Q ss_pred CCCCCcccEEEeCCCCCC-cc-ccccCCCCCcEEEEeCCCc
Q 045248 127 SPSGRKYDAVIHCATGIP-WS-TFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 127 ~~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~G~iv~~g~~~ 165 (240)
.++|++++++|... +. ..+..+++++.++.+|...
T Consensus 266 ----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 266 ----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred ----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 36899999999754 54 5788999999999998654
No 134
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.26 E-value=6.1e-06 Score=68.65 Aligned_cols=90 Identities=16% Similarity=0.003 Sum_probs=69.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 143 (240)
-.|++|+|+| .|.+|+.+++.++.+|++|+++.. +.+...++..|+. +.+. ...+ .+.|++|+++|..
T Consensus 193 l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~l----eeal-----~~aDVVItaTG~~ 261 (406)
T TIGR00936 193 IAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMTM----EEAA-----KIGDIFITATGNK 261 (406)
T ss_pred CCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCCH----HHHH-----hcCCEEEECCCCH
Confidence 4899999999 999999999999999999999885 4666666777763 3221 1111 3579999999975
Q ss_pred C-cc-ccccCCCCCcEEEEeCCCc
Q 045248 144 P-WS-TFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 144 ~-~~-~~~~~l~~~G~iv~~g~~~ 165 (240)
. +. ..+..+++++.++.+|...
T Consensus 262 ~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 262 DVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred HHHHHHHHhcCCCCcEEEEECCCC
Confidence 5 54 4788999999999998653
No 135
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.21 E-value=5.1e-06 Score=72.96 Aligned_cols=95 Identities=19% Similarity=0.149 Sum_probs=66.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc----------------------ccHHHHHhcCCCEEEeCCC-Cc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA----------------------RNIEFVKSLGADEVLDYKT-PD 121 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~----------------------~~~~~~~~~g~~~v~~~~~-~~ 121 (240)
++|++|+|+| +|+.|+.+++.++..|++|++++.. .+.+.++++|++..++... .+
T Consensus 135 ~~g~~V~VIG-aGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~ 213 (564)
T PRK12771 135 DTGKRVAVIG-GGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGED 213 (564)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCc
Confidence 6899999999 8999999999999999998888731 2456678899876665432 11
Q ss_pred cccccCCCCCcccEEEeCCCCCC-ccccccCCCCCcEEEEeC
Q 045248 122 GAALKSPSGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 122 ~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~g 162 (240)
.. .... ..++|+||+++|... ....+......|.+..++
T Consensus 214 ~~-~~~~-~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~ 253 (564)
T PRK12771 214 IT-LEQL-EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVD 253 (564)
T ss_pred CC-HHHH-HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHH
Confidence 11 1111 246999999999753 444555556666665443
No 136
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.18 E-value=1.9e-05 Score=63.50 Aligned_cols=93 Identities=15% Similarity=0.233 Sum_probs=70.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP 144 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 144 (240)
.+++++|+| .|.+|+.+++.++.+|++|++..+. ++.+.++++|...+ ...+. ...+ .++|+||+|++...
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~~~l-~~~l-----~~aDiVI~t~p~~~ 222 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HLSEL-AEEV-----GKIDIIFNTIPALV 222 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cHHHH-HHHh-----CCCCEEEECCChhh
Confidence 689999999 8999999999999999999999865 67777888886533 21110 1111 35899999997543
Q ss_pred -ccccccCCCCCcEEEEeCCCch
Q 045248 145 -WSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 145 -~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
-...++.+++++.++.+...+.
T Consensus 223 i~~~~l~~~~~g~vIIDla~~pg 245 (296)
T PRK08306 223 LTKEVLSKMPPEALIIDLASKPG 245 (296)
T ss_pred hhHHHHHcCCCCcEEEEEccCCC
Confidence 3466678899999998886543
No 137
>PLN02494 adenosylhomocysteinase
Probab=98.14 E-value=2.2e-05 Score=66.12 Aligned_cols=89 Identities=13% Similarity=0.022 Sum_probs=70.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 143 (240)
-.|++++|+| .|.+|..+++.++.+|++|+++..+ .+...+...|... ++. ...+ ...|+++++.|..
T Consensus 252 LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~v-v~l----eEal-----~~ADVVI~tTGt~ 320 (477)
T PLN02494 252 IAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQV-LTL----EDVV-----SEADIFVTTTGNK 320 (477)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCee-ccH----HHHH-----hhCCEEEECCCCc
Confidence 3699999999 9999999999999999999998865 5656677777652 211 1112 3479999999975
Q ss_pred C--ccccccCCCCCcEEEEeCCC
Q 045248 144 P--WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 144 ~--~~~~~~~l~~~G~iv~~g~~ 164 (240)
. ....++.+++++.++.+|..
T Consensus 321 ~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 321 DIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred cchHHHHHhcCCCCCEEEEcCCC
Confidence 4 37899999999999999974
No 138
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.02 E-value=7.8e-05 Score=63.02 Aligned_cols=90 Identities=13% Similarity=0.012 Sum_probs=68.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 143 (240)
-.|++++|+| .|.+|..+++.++.+|++|+++.++ .+...+...|+.. .+. ...+ ...|+|+.+.|..
T Consensus 252 LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~-~~l----eell-----~~ADIVI~atGt~ 320 (476)
T PTZ00075 252 IAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQV-VTL----EDVV-----ETADIFVTATGNK 320 (476)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCcee-ccH----HHHH-----hcCCEEEECCCcc
Confidence 4899999999 9999999999999999999988754 4444444556532 211 1111 3589999999875
Q ss_pred C-cc-ccccCCCCCcEEEEeCCCc
Q 045248 144 P-WS-TFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 144 ~-~~-~~~~~l~~~G~iv~~g~~~ 165 (240)
. +. ..+..+++++.++.+|...
T Consensus 321 ~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 321 DIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred cccCHHHHhccCCCcEEEEcCCCc
Confidence 4 43 7889999999999999764
No 139
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.84 E-value=3e-05 Score=62.97 Aligned_cols=109 Identities=18% Similarity=0.226 Sum_probs=71.6
Q ss_pred CceeeCCCCCChhhhhhh-chHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-c
Q 045248 25 SSTVARPSEVSAAEGSGL-PVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-R 101 (240)
Q Consensus 25 ~~~~~ip~~~~~~~aa~~-~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~ 101 (240)
..++++|+.+..+.++.. +.+ +++.++. .+...++. -++.+|+|+| +|.+|..+++.++..|. +|+++.++ +
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~s--v~~~Av~-~a~~~~~~-l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ 213 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVS--ISSAAVE-LAEKIFGN-LKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYE 213 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcC--HHHHHHH-HHHHHhCC-ccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 356788888887877665 333 5555552 22211000 2789999999 89999999999998887 77777765 4
Q ss_pred c-HHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCc
Q 045248 102 N-IEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPW 145 (240)
Q Consensus 102 ~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 145 (240)
+ .+.++++|.. +++..+. ...+ ...|+||.+++.+..
T Consensus 214 ra~~la~~~g~~-~~~~~~~-~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 214 RAEELAKELGGN-AVPLDEL-LELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHHHHHcCCe-EEeHHHH-HHHH-----hcCCEEEECCCCCch
Confidence 4 4677888873 3332210 1111 347999999997543
No 140
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.76 E-value=0.00018 Score=59.79 Aligned_cols=95 Identities=13% Similarity=0.161 Sum_probs=63.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-hcCCCEEEeCCCCccccccCCCCCcccEEEeCC---
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-SLGADEVLDYKTPDGAALKSPSGRKYDAVIHCA--- 140 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~--- 140 (240)
++.+|+|+| +|.+|+.+++.++.+|++|++++++ ++.+.+. .++........+.. ...+.. .++|++|+++
T Consensus 166 ~~~~VlViG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~-~l~~~l--~~aDvVI~a~~~~ 241 (370)
T TIGR00518 166 EPGDVTIIG-GGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAY-EIEDAV--KRADLLIGAVLIP 241 (370)
T ss_pred CCceEEEEc-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHH-HHHHHH--ccCCEEEEccccC
Confidence 456699999 8999999999999999998888864 5666554 45543222221111 111111 3589999998
Q ss_pred CC--CC--ccccccCCCCCcEEEEeCCC
Q 045248 141 TG--IP--WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 141 g~--~~--~~~~~~~l~~~G~iv~~g~~ 164 (240)
|. +. ....++.+++++.++.++..
T Consensus 242 g~~~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 242 GAKAPKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CCCCCcCcCHHHHhcCCCCCEEEEEecC
Confidence 33 21 35677788999999988743
No 141
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.76 E-value=0.00042 Score=54.52 Aligned_cols=129 Identities=17% Similarity=0.129 Sum_probs=79.1
Q ss_pred ccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC-E
Q 045248 15 GLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT-H 93 (240)
Q Consensus 15 ~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~ 93 (240)
+|.+|.. +...++++++++++..+.--. +. .+...+... . .++++||-+| +|. |..++.+++ .|+ +
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~-~~l~~l~~~--~-----~~~~~VLDiG-cGs-G~l~i~~~~-~g~~~ 144 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TR-LCLEALEKL--V-----LPGKTVLDVG-CGS-GILAIAAAK-LGAKK 144 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHH-HH-HHHHHHHhh--c-----CCCCEEEEeC-CcH-HHHHHHHHH-cCCCe
Confidence 5556544 667788899888887654222 21 223333222 2 5889999999 676 877776554 576 6
Q ss_pred EEEEeCc-ccHHHHHhc----CCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC----ccccccCCCCCcEEEEeCCC
Q 045248 94 VTASCGA-RNIEFVKSL----GADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP----WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 94 v~~~~~~-~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~~~~~l~~~G~iv~~g~~ 164 (240)
|++++.+ ...+.+++. +....+. +.. ....||+|+-...... +..+.+.|+++|.++..|..
T Consensus 145 v~giDis~~~l~~A~~n~~~~~~~~~~~--------~~~-~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 145 VLAVDIDPQAVEAARENAELNGVELNVY--------LPQ-GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEE--------Ecc-CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 9999954 555555432 2211111 000 1115999987665432 56778889999999988754
Q ss_pred c
Q 045248 165 P 165 (240)
Q Consensus 165 ~ 165 (240)
.
T Consensus 216 ~ 216 (250)
T PRK00517 216 E 216 (250)
T ss_pred H
Confidence 3
No 142
>PRK08324 short chain dehydrogenase; Validated
Probab=97.75 E-value=3e-05 Score=69.71 Aligned_cols=112 Identities=18% Similarity=0.097 Sum_probs=69.1
Q ss_pred cccceEEEecCCceeeCCCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCE
Q 045248 14 GGLAEFAVAKESSTVARPSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTH 93 (240)
Q Consensus 14 G~~~e~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~ 93 (240)
.++++|..+++..++.+ +..+.+++... +.... ..-+|+++||+||+|++|..+++.+...|++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~------------~~~~~---~~l~gk~vLVTGasggIG~~la~~L~~~Ga~ 448 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQ------------RMPKP---KPLAGKVALVTGAAGGIGKATAKRLAAEGAC 448 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhh------------cCCCC---cCCCCCEEEEecCCCHHHHHHHHHHHHCcCE
Confidence 45667777777777766 55666665421 11011 0036899999999999999999999999999
Q ss_pred EEEEeCc-ccHHHH-HhcCC--C-EEE--eCCCCc-c-ccccC--CCCCcccEEEeCCC
Q 045248 94 VTASCGA-RNIEFV-KSLGA--D-EVL--DYKTPD-G-AALKS--PSGRKYDAVIHCAT 141 (240)
Q Consensus 94 v~~~~~~-~~~~~~-~~~g~--~-~v~--~~~~~~-~-~~~~~--~~~~~~d~v~d~~g 141 (240)
|+.++++ ++.+.+ ++++. . ..+ |..+.. . ..+.. ...+++|++|+++|
T Consensus 449 Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 449 VVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred EEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 9999865 444433 33442 1 122 322222 1 11111 11247999999998
No 143
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.69 E-value=0.00037 Score=52.28 Aligned_cols=78 Identities=22% Similarity=0.303 Sum_probs=56.7
Q ss_pred CCCCeEEEEcC-CchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-hcCCC-EEEeCCCCc-----cccccCCCCCcccE
Q 045248 65 GQQKNILVTAA-SGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-SLGAD-EVLDYKTPD-----GAALKSPSGRKYDA 135 (240)
Q Consensus 65 ~~g~~vlV~G~-~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~-~v~~~~~~~-----~~~~~~~~~~~~d~ 135 (240)
...+.|||+|+ .||+|.++..-...-|+.|+++++. +++..+. ++|.. .-+|..+++ ...++....++.|+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 35678899875 6899999999999999999999986 7777775 77742 223444433 12334445678999
Q ss_pred EEeCCCC
Q 045248 136 VIHCATG 142 (240)
Q Consensus 136 v~d~~g~ 142 (240)
.++..|.
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9998884
No 144
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.64 E-value=0.00018 Score=56.41 Aligned_cols=77 Identities=21% Similarity=0.296 Sum_probs=54.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-h----cCCC-EEE--eCCCCc--cccccC--CCCC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-S----LGAD-EVL--DYKTPD--GAALKS--PSGR 131 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~----~g~~-~v~--~~~~~~--~~~~~~--~~~~ 131 (240)
..+.+++|+||++|+|...+..+...|++++.+.|+ ++++.+. + .|.. .++ |..+.+ .....+ ..+.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 578999999999999999999999999999999986 6765552 2 3322 233 223332 112222 2335
Q ss_pred cccEEEeCCC
Q 045248 132 KYDAVIHCAT 141 (240)
Q Consensus 132 ~~d~v~d~~g 141 (240)
.+|+.++++|
T Consensus 84 ~IdvLVNNAG 93 (265)
T COG0300 84 PIDVLVNNAG 93 (265)
T ss_pred cccEEEECCC
Confidence 7999999998
No 145
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.62 E-value=0.00033 Score=54.40 Aligned_cols=77 Identities=13% Similarity=0.188 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-Hh---cCCCEEEeC--CCCc--cccccCC--CCCccc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KS---LGADEVLDY--KTPD--GAALKSP--SGRKYD 134 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~---~g~~~v~~~--~~~~--~~~~~~~--~~~~~d 134 (240)
++++++|+|++|++|..+++.+...|++|+.++++ ++.+.+ ++ .+..+.+.. .+.+ ....+.. .-.++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 57899999999999999999999999999999975 444433 22 222233322 2211 1111111 124689
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
.++.+.|.
T Consensus 84 ~ii~~ag~ 91 (238)
T PRK05786 84 GLVVTVGG 91 (238)
T ss_pred EEEEcCCC
Confidence 99999874
No 146
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.62 E-value=0.0003 Score=58.72 Aligned_cols=112 Identities=13% Similarity=0.078 Sum_probs=73.0
Q ss_pred hhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHHHhcCCCEEEeCC
Q 045248 40 SGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEVLDYK 118 (240)
Q Consensus 40 a~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~ 118 (240)
..+..+....+..+.+..++ +++.+||-+| + |.|..+..+++..|++|++++. ++..+.+++......+...
T Consensus 146 ~~L~~Aq~~k~~~l~~~l~l-----~~g~rVLDIG-c-G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~ 218 (383)
T PRK11705 146 DTLEEAQEAKLDLICRKLQL-----KPGMRVLDIG-C-GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIR 218 (383)
T ss_pred CCHHHHHHHHHHHHHHHhCC-----CCCCEEEEeC-C-CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEE
Confidence 34444445556666677777 8999999999 4 5777888899988999999995 4777777654322112111
Q ss_pred CCccccccCCCCCcccEEEe-----CCCCC----CccccccCCCCCcEEEEeC
Q 045248 119 TPDGAALKSPSGRKYDAVIH-----CATGI----PWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 119 ~~~~~~~~~~~~~~~d~v~d-----~~g~~----~~~~~~~~l~~~G~iv~~g 162 (240)
..+.. .. ...||.|+. .+|.. .+..+.+.|+|+|.++...
T Consensus 219 ~~D~~---~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 219 LQDYR---DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred ECchh---hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 11111 11 246998864 33432 2677788999999987653
No 147
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.62 E-value=5.8e-05 Score=63.74 Aligned_cols=119 Identities=12% Similarity=0.082 Sum_probs=73.9
Q ss_pred ccceecccCCCcccceEEEecCCceee---C-CCCCChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCch
Q 045248 3 NLWRIDVSHNGGGLAEFAVAKESSTVA---R-PSEVSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGG 78 (240)
Q Consensus 3 ~~~~~~~~~~~G~~~e~~~v~~~~~~~---i-p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~ 78 (240)
......|...++.|++++.++. .+.. | +..+|...+| .....+..+. .++++++|+| +|.
T Consensus 127 ~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~-----l~~~~VlViG-aG~ 190 (417)
T TIGR01035 127 QEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGS-----LKGKKALLIG-AGE 190 (417)
T ss_pred HHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCC-----ccCCEEEEEC-ChH
Confidence 3344445556788999888876 3332 3 3334422222 1111133333 4789999999 899
Q ss_pred HHHHHHHHHHhCCC-EEEEEeCc-cc-HHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC
Q 045248 79 VGHYAVQLAKLGNT-HVTASCGA-RN-IEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP 144 (240)
Q Consensus 79 vG~~~~~~a~~~g~-~v~~~~~~-~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 144 (240)
+|..+++.++..|+ +|+++.++ ++ .+.++++|.. .+...+. ...+ .++|+||+|+|.+.
T Consensus 191 iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~~l-~~~l-----~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 191 MGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFEDL-EEYL-----AEADIVISSTGAPH 252 (417)
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHHHH-HHHH-----hhCCEEEECCCCCC
Confidence 99999999999995 88888875 55 3466777764 3332210 1111 36899999998643
No 148
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.55 E-value=0.00038 Score=49.29 Aligned_cols=91 Identities=19% Similarity=0.183 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHH-HhcCCC--EEEeCCCCccccccCCCCCcccEEEeCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFV-KSLGAD--EVLDYKTPDGAALKSPSGRKYDAVIHCA 140 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~-~~~g~~--~v~~~~~~~~~~~~~~~~~~~d~v~d~~ 140 (240)
.+++++|+| +|++|.+++..+...|+ +|+.+.|+ ++.+.+ +.++.. ..+.+.+.. . .-..+|+|+.|+
T Consensus 11 ~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~-~-----~~~~~DivI~aT 83 (135)
T PF01488_consen 11 KGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLE-E-----ALQEADIVINAT 83 (135)
T ss_dssp TTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHC-H-----HHHTESEEEE-S
T ss_pred CCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHH-H-----HHhhCCeEEEec
Confidence 789999999 89999999999999999 68888876 554444 556332 233333211 0 114599999999
Q ss_pred CCCCccccccCCCCC----cEEEEeCC
Q 045248 141 TGIPWSTFEPNLGTN----GKVIDITP 163 (240)
Q Consensus 141 g~~~~~~~~~~l~~~----G~iv~~g~ 163 (240)
+.....-.-..+++. +.++.++.
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 84 PSGMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp STTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred CCCCcccCHHHHHHHHhhhhceecccc
Confidence 864321111223333 46666654
No 149
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.53 E-value=9.4e-05 Score=58.75 Aligned_cols=99 Identities=18% Similarity=0.276 Sum_probs=58.6
Q ss_pred HHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHH----HhcCCCEEEeCCCCcccccc
Q 045248 52 ALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFV----KSLGADEVLDYKTPDGAALK 126 (240)
Q Consensus 52 ~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~----~~~g~~~v~~~~~~~~~~~~ 126 (240)
.+.+.+++ ++|++||-+| +| .|-.+..+++.+|++|++++- .+..+++ ++.|...-+.....+...+
T Consensus 53 ~~~~~~~l-----~~G~~vLDiG-cG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~~- 124 (273)
T PF02353_consen 53 LLCEKLGL-----KPGDRVLDIG-CG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRDL- 124 (273)
T ss_dssp HHHTTTT-------TT-EEEEES--T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG--
T ss_pred HHHHHhCC-----CCCCEEEEeC-CC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeecccc-
Confidence 45588888 9999999999 55 788888999999999999995 4666655 4556321111111111111
Q ss_pred CCCCCcccEEE-----eCCCCCC----ccccccCCCCCcEEEEe
Q 045248 127 SPSGRKYDAVI-----HCATGIP----WSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 127 ~~~~~~~d~v~-----d~~g~~~----~~~~~~~l~~~G~iv~~ 161 (240)
. ..||.|+ +.+|.+. +..+.+.|+|+|+++.-
T Consensus 125 --~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 125 --P-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp -----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred --C-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 2788874 4455332 66777899999998743
No 150
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.52 E-value=0.00035 Score=53.61 Aligned_cols=77 Identities=22% Similarity=0.274 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcCC----CEEEeCCCCc--ccccc--CCCCCcccE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLGA----DEVLDYKTPD--GAALK--SPSGRKYDA 135 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~----~~v~~~~~~~--~~~~~--~~~~~~~d~ 135 (240)
.++.++|.||++|+|.+.++.+...|++|+.+.+. ++++.+ .+++. ...+|-++.. ...++ ...-..+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 56889999999999999999999999999999975 777666 56773 2233444432 11121 112356999
Q ss_pred EEeCCCC
Q 045248 136 VIHCATG 142 (240)
Q Consensus 136 v~d~~g~ 142 (240)
.++..|-
T Consensus 85 LvNNAGl 91 (246)
T COG4221 85 LVNNAGL 91 (246)
T ss_pred EEecCCC
Confidence 9999983
No 151
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.52 E-value=0.00059 Score=50.76 Aligned_cols=116 Identities=15% Similarity=0.136 Sum_probs=73.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHH-HHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC-
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEF-VKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG- 142 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~- 142 (240)
-.|++|.|+| .|.+|...++.++.+|++|++.++..+... ..+.+.. +.+. ...+ ...|+|+.++..
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~----~~~l-~ell-----~~aDiv~~~~plt 102 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE----YVSL-DELL-----AQADIVSLHLPLT 102 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE----ESSH-HHHH-----HH-SEEEE-SSSS
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce----eeeh-hhhc-----chhhhhhhhhccc
Confidence 3699999999 999999999999999999999998644333 4555531 1111 1111 247888888862
Q ss_pred C-C----ccccccCCCCCcEEEEeCCCchHHHHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCceEEecCceecc
Q 045248 143 I-P----WSTFEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKLKTVINSKHPL 217 (240)
Q Consensus 143 ~-~----~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 217 (240)
+ + -...+..++++..+|.++-.. --+-+.+++.+++|++.--.-+++.-
T Consensus 103 ~~T~~li~~~~l~~mk~ga~lvN~aRG~--------------------------~vde~aL~~aL~~g~i~ga~lDV~~~ 156 (178)
T PF02826_consen 103 PETRGLINAEFLAKMKPGAVLVNVARGE--------------------------LVDEDALLDALESGKIAGAALDVFEP 156 (178)
T ss_dssp TTTTTSBSHHHHHTSTTTEEEEESSSGG--------------------------GB-HHHHHHHHHTTSEEEEEESS-SS
T ss_pred cccceeeeeeeeeccccceEEEeccchh--------------------------hhhhhHHHHHHhhccCceEEEECCCC
Confidence 1 1 235567888888888776421 11345667778888887544444433
No 152
>PRK12742 oxidoreductase; Provisional
Probab=97.52 E-value=0.00057 Score=52.99 Aligned_cols=75 Identities=21% Similarity=0.226 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-c-ccHHHH-HhcCCCEE-EeCCCCc-c-ccccCCCCCcccEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-A-RNIEFV-KSLGADEV-LDYKTPD-G-AALKSPSGRKYDAVIHC 139 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~-~~~~~~-~~~g~~~v-~~~~~~~-~-~~~~~~~~~~~d~v~d~ 139 (240)
.++++||+|++|++|..+++.+...|++|+.+.+ . ++.+.+ .+++...+ .|..+.. . ..+.. ..++|+++.+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRK--SGALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHH--hCCCcEEEEC
Confidence 5789999999999999999999999999887764 2 333333 44554322 1222211 1 11221 2469999999
Q ss_pred CCC
Q 045248 140 ATG 142 (240)
Q Consensus 140 ~g~ 142 (240)
+|.
T Consensus 83 ag~ 85 (237)
T PRK12742 83 AGI 85 (237)
T ss_pred CCC
Confidence 984
No 153
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00037 Score=55.61 Aligned_cols=76 Identities=26% Similarity=0.517 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEE-EeCCCCc--ccccc---CCCCCcccEEEe
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEV-LDYKTPD--GAALK---SPSGRKYDAVIH 138 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v-~~~~~~~--~~~~~---~~~~~~~d~v~d 138 (240)
.+++++|+||+|++|..+++.+...|++|++++++ ++.+.+.+.+...+ .|..+.. ...+. ...++.+|+++.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 46789999999999999999999999999999975 66666665554322 2333322 11111 112347999999
Q ss_pred CCC
Q 045248 139 CAT 141 (240)
Q Consensus 139 ~~g 141 (240)
+.|
T Consensus 83 ~Ag 85 (277)
T PRK05993 83 NGA 85 (277)
T ss_pred CCC
Confidence 987
No 154
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.45 E-value=0.0005 Score=55.11 Aligned_cols=93 Identities=14% Similarity=0.207 Sum_probs=66.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP 144 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 144 (240)
.+++++|+| .|.+|..+++.++.+|++|++..++ ++.+.+.++|... +...+. ...+ .+.|+|+.++....
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~-~~~~~l-~~~l-----~~aDiVint~P~~i 221 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARITEMGLIP-FPLNKL-EEKV-----AEIDIVINTIPALV 221 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee-ecHHHH-HHHh-----ccCCEEEECCChHH
Confidence 689999999 8999999999999999999988875 5556666666532 221110 1111 36899999996543
Q ss_pred -ccccccCCCCCcEEEEeCCCch
Q 045248 145 -WSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 145 -~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
-...++.++++..++.++..+.
T Consensus 222 i~~~~l~~~k~~aliIDlas~Pg 244 (287)
T TIGR02853 222 LTADVLSKLPKHAVIIDLASKPG 244 (287)
T ss_pred hCHHHHhcCCCCeEEEEeCcCCC
Confidence 2345677888888888876543
No 155
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.45 E-value=0.00088 Score=52.94 Aligned_cols=104 Identities=12% Similarity=0.194 Sum_probs=69.0
Q ss_pred HHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEe-CcccHHHH----HhcCCCEEEeCCCCcc
Q 045248 48 TAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASC-GARNIEFV----KSLGADEVLDYKTPDG 122 (240)
Q Consensus 48 ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~-~~~~~~~~----~~~g~~~v~~~~~~~~ 122 (240)
.++..+.+.+++ ++|++||=+| .|-|.+++.+|+.+|.+|++++ +++..+.+ ++.|...-+...-.+.
T Consensus 59 ~k~~~~~~kl~L-----~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~ 131 (283)
T COG2230 59 AKLDLILEKLGL-----KPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDY 131 (283)
T ss_pred HHHHHHHHhcCC-----CCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccc
Confidence 344455588888 9999999998 4578889999999999999999 54555554 4566441111111111
Q ss_pred ccccCCCCCcccEE-----EeCCCCCC----ccccccCCCCCcEEEEeC
Q 045248 123 AALKSPSGRKYDAV-----IHCATGIP----WSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 123 ~~~~~~~~~~~d~v-----~d~~g~~~----~~~~~~~l~~~G~iv~~g 162 (240)
..+. +.||-| |+.+|.+. +..+.+.|+++|++++-.
T Consensus 132 rd~~----e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~ 176 (283)
T COG2230 132 RDFE----EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHS 176 (283)
T ss_pred cccc----cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEE
Confidence 1121 238877 45566532 778888999999987554
No 156
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.00048 Score=54.83 Aligned_cols=75 Identities=21% Similarity=0.232 Sum_probs=51.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEE-EeCCCCc--cccccCC--CCCcccEEEeCCC
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEV-LDYKTPD--GAALKSP--SGRKYDAVIHCAT 141 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v-~~~~~~~--~~~~~~~--~~~~~d~v~d~~g 141 (240)
+++||+||+|++|..+++.+...|++|++++++ ++.+.+.+.+...+ .|..+.. ...++.. ...++|+++++.|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 81 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG 81 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 479999999999999999999999999999875 55555555554322 2333322 1111111 2246999999998
Q ss_pred C
Q 045248 142 G 142 (240)
Q Consensus 142 ~ 142 (240)
.
T Consensus 82 ~ 82 (274)
T PRK05693 82 Y 82 (274)
T ss_pred C
Confidence 3
No 157
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.39 E-value=0.0021 Score=48.41 Aligned_cols=99 Identities=20% Similarity=0.191 Sum_probs=68.3
Q ss_pred HhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-c----cHHHHHhcCCCEEEeCCCCccccccCC
Q 045248 54 TQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-R----NIEFVKSLGADEVLDYKTPDGAALKSP 128 (240)
Q Consensus 54 ~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~----~~~~~~~~g~~~v~~~~~~~~~~~~~~ 128 (240)
.+...+ +++++||-+| .|.|..+.-+++..| +|+.+.+. + ..+.++.+|...|.... .| ...-..
T Consensus 65 ~~~L~~-----~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~-gD-G~~G~~ 134 (209)
T COG2518 65 LQLLEL-----KPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRH-GD-GSKGWP 134 (209)
T ss_pred HHHhCC-----CCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEE-CC-cccCCC
Confidence 366677 8999999998 457888888888888 99999974 2 23445678875432211 11 111122
Q ss_pred CCCcccEEEeCCCCCC-ccccccCCCCCcEEEEeC
Q 045248 129 SGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 129 ~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~g 162 (240)
....||.|+-+.+.+. -...++.|++||+++..-
T Consensus 135 ~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv 169 (209)
T COG2518 135 EEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV 169 (209)
T ss_pred CCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence 3367999998888766 457889999999987553
No 158
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.39 E-value=0.00054 Score=51.13 Aligned_cols=76 Identities=17% Similarity=0.137 Sum_probs=52.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCC---CEEEeCCCCc--cccccC--CCCCcccEEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGA---DEVLDYKTPD--GAALKS--PSGRKYDAVI 137 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~---~~v~~~~~~~--~~~~~~--~~~~~~d~v~ 137 (240)
-|.+|||.||++|+|+.+.+-....|.+||.+.+. ++++.++..-. ..+-|..+.+ ....++ ..-...++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 68999999999999999999999999999999975 78888865432 2333332222 111111 1123467888
Q ss_pred eCCC
Q 045248 138 HCAT 141 (240)
Q Consensus 138 d~~g 141 (240)
++.|
T Consensus 84 NNAG 87 (245)
T COG3967 84 NNAG 87 (245)
T ss_pred eccc
Confidence 8777
No 159
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0012 Score=50.86 Aligned_cols=75 Identities=21% Similarity=0.242 Sum_probs=50.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEE--eCCCCc--cccccCCCCCcccEEEeCCCC
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVL--DYKTPD--GAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~--~~~~~~--~~~~~~~~~~~~d~v~d~~g~ 142 (240)
++++|+|++|++|...++.+...|++|++++++ ++.+.+++++....+ |..+.. ....+.....++|+++.++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 579999999999999998888899999999965 555555555433332 222221 112233333579999999874
No 160
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.30 E-value=0.00053 Score=58.14 Aligned_cols=72 Identities=18% Similarity=0.254 Sum_probs=51.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccH-HHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNI-EFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCAT 141 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g 141 (240)
.++++|+|+| +|.+|.++++.++..|+ +|+++.++ ++. +.++++|.. +++..+. ...+ .++|+||+|+|
T Consensus 180 ~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~~~-~~~l-----~~aDvVI~aT~ 251 (423)
T PRK00045 180 LSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLDEL-PEAL-----AEADIVISSTG 251 (423)
T ss_pred ccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHHHH-HHHh-----ccCCEEEECCC
Confidence 3789999999 89999999999999998 78877765 554 466778754 3332111 1111 35899999999
Q ss_pred CCC
Q 045248 142 GIP 144 (240)
Q Consensus 142 ~~~ 144 (240)
.+.
T Consensus 252 s~~ 254 (423)
T PRK00045 252 APH 254 (423)
T ss_pred CCC
Confidence 643
No 161
>PRK06182 short chain dehydrogenase; Validated
Probab=97.26 E-value=0.001 Score=52.87 Aligned_cols=77 Identities=26% Similarity=0.307 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEE-EeCCCCc--cccccC--CCCCcccEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEV-LDYKTPD--GAALKS--PSGRKYDAVIHC 139 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v-~~~~~~~--~~~~~~--~~~~~~d~v~d~ 139 (240)
++++++|+|++|++|..+++.+...|++|+++.++ ++.+.+...+...+ .|..+.+ ...++. ....++|+++.+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 46789999999999999999998899999999875 55555544443322 2333322 111111 123479999999
Q ss_pred CCC
Q 045248 140 ATG 142 (240)
Q Consensus 140 ~g~ 142 (240)
.|.
T Consensus 82 ag~ 84 (273)
T PRK06182 82 AGY 84 (273)
T ss_pred CCc
Confidence 984
No 162
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0017 Score=50.92 Aligned_cols=75 Identities=20% Similarity=0.194 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc--cHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR--NIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 142 (240)
.+++++|+||+|++|..+++.+...|++|+.+.+.. ..+... .+....+..+-.+...+.... .++|+++.++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~-~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESPNEWIKWECGKEESLDKQL-ASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCHHHHHHhc-CCCCEEEECCcc
Confidence 578999999999999999999999999999988643 222111 111222221111111121111 359999999984
No 163
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.00088 Score=54.93 Aligned_cols=77 Identities=18% Similarity=0.284 Sum_probs=51.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH----HHhcCCCE-EE--eCCCCc--cccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF----VKSLGADE-VL--DYKTPD--GAALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~----~~~~g~~~-v~--~~~~~~--~~~~~~--~~~~~~ 133 (240)
.+++++|+|++|++|.++++.+...|++|+.+.++ ++.+. +++.|... ++ |..+.+ ....+. ....++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999998865 44432 34456542 22 322222 111111 112569
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|++|+++|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999983
No 164
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.22 E-value=0.0028 Score=45.84 Aligned_cols=102 Identities=13% Similarity=0.056 Sum_probs=64.6
Q ss_pred HHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHHHhcCCCEEEeCCCCccccccCC
Q 045248 50 HQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEVLDYKTPDGAALKSP 128 (240)
Q Consensus 50 ~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 128 (240)
+.++.+..++. -.|++++|.| =|.+|...++.++.+|++|++++. +-+.-.+..-|.. +..- ...+
T Consensus 10 ~d~i~r~t~~~----l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~-v~~~----~~a~--- 76 (162)
T PF00670_consen 10 VDGIMRATNLM----LAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFE-VMTL----EEAL--- 76 (162)
T ss_dssp HHHHHHHH-S------TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-E-EE-H----HHHT---
T ss_pred HHHHHhcCcee----eCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcE-ecCH----HHHH---
Confidence 33443444543 4899999999 999999999999999999999996 4555555555643 2210 1111
Q ss_pred CCCcccEEEeCCCCCC-c-cccccCCCCCcEEEEeCCCch
Q 045248 129 SGRKYDAVIHCATGIP-W-STFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 129 ~~~~~d~v~d~~g~~~-~-~~~~~~l~~~G~iv~~g~~~~ 166 (240)
...|+++.++|... + .+-++.++++..+..+|..+.
T Consensus 77 --~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~ 114 (162)
T PF00670_consen 77 --RDADIFVTATGNKDVITGEHFRQMKDGAILANAGHFDV 114 (162)
T ss_dssp --TT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred --hhCCEEEECCCCccccCHHHHHHhcCCeEEeccCcCce
Confidence 35799999999865 3 466788999989988886543
No 165
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0012 Score=51.39 Aligned_cols=75 Identities=25% Similarity=0.391 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcCCCEE-EeCCCCc--cccccCCCCCcccEEEeCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLGADEV-LDYKTPD--GAALKSPSGRKYDAVIHCA 140 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~v-~~~~~~~--~~~~~~~~~~~~d~v~d~~ 140 (240)
++++++|+|++|++|..+++.+...|++|+.+.++ ++.+.+ +..+...+ .|..+.. ...+.. ..++|++|.+.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence 57899999999999999999999999999998875 444443 33443322 2332221 111111 24689999999
Q ss_pred CC
Q 045248 141 TG 142 (240)
Q Consensus 141 g~ 142 (240)
|.
T Consensus 86 g~ 87 (245)
T PRK07060 86 GI 87 (245)
T ss_pred CC
Confidence 84
No 166
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0013 Score=51.68 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcCCCEE-EeCCCCc--cccccCC--CCCcccEEEe
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLGADEV-LDYKTPD--GAALKSP--SGRKYDAVIH 138 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~v-~~~~~~~--~~~~~~~--~~~~~d~v~d 138 (240)
++++++|+||+|++|..+++.+...|++|+.++++ .+.+.. ++++...+ .|..+.. ...+... ...++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57899999999999999999999999999999865 443333 44543211 2333322 1111111 1246899999
Q ss_pred CCCC
Q 045248 139 CATG 142 (240)
Q Consensus 139 ~~g~ 142 (240)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9874
No 167
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0017 Score=50.98 Aligned_cols=74 Identities=19% Similarity=0.184 Sum_probs=48.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH----hcCCC-EEE--eCCCCccccccCCCCCcccEEEe
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK----SLGAD-EVL--DYKTPDGAALKSPSGRKYDAVIH 138 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~d~v~d 138 (240)
++++||+|++|++|..+++.+...|++|+++++. ++.+.++ ..+.. .++ |..+.. .+......++|++|.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~id~vi~ 79 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAI--DRAQAAEWDVDVLLN 79 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHH--HHHHHhcCCCCEEEE
Confidence 3579999999999999999999999999998864 3333332 23322 122 322221 111112247999999
Q ss_pred CCCC
Q 045248 139 CATG 142 (240)
Q Consensus 139 ~~g~ 142 (240)
+.|.
T Consensus 80 ~ag~ 83 (257)
T PRK09291 80 NAGI 83 (257)
T ss_pred CCCc
Confidence 9883
No 168
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0011 Score=52.02 Aligned_cols=77 Identities=21% Similarity=0.229 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH----hcC-CCEEEe--CCCCc-c-ccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK----SLG-ADEVLD--YKTPD-G-AALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~----~~g-~~~v~~--~~~~~-~-~~~~~--~~~~~~ 133 (240)
.+++++|+|++|++|..+++.+...|++|+++.++ ++.+.+. ..+ ...++. ..+.+ . ..+.. ....++
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTI 87 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 67999999999999999999999999999999864 4443332 222 122332 22211 1 11110 112468
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.+.|.
T Consensus 88 d~li~~ag~ 96 (258)
T PRK06949 88 DILVNNSGV 96 (258)
T ss_pred CEEEECCCC
Confidence 999999983
No 169
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0019 Score=52.08 Aligned_cols=77 Identities=26% Similarity=0.265 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCC-EEE--eCCCCc--cccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGAD-EVL--DYKTPD--GAALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~-~v~--~~~~~~--~~~~~~--~~~~~~ 133 (240)
.+++++|+||+|++|..+++.+...|++|++++++ ++.+.+ ++.+.. ..+ |-.+.. ...++. ..-+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46889999999999999999998899999999975 444333 223322 222 222211 111111 012469
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.+.|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999984
No 170
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.11 E-value=0.002 Score=47.85 Aligned_cols=88 Identities=27% Similarity=0.260 Sum_probs=57.6
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccc-cCCCCCcccEEEeCCCCCC---
Q 045248 70 ILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAAL-KSPSGRKYDAVIHCATGIP--- 144 (240)
Q Consensus 70 vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~-~~~~~~~~d~v~d~~g~~~--- 144 (240)
|+|.||+|.+|..+++.+...|.+|++++++ ++.+. ..+. .++..+-.+...+ ... .++|.||.++|...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~-~~~~~d~~d~~~~~~al--~~~d~vi~~~~~~~~~~ 75 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGV-EIIQGDLFDPDSVKAAL--KGADAVIHAAGPPPKDV 75 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTE-EEEESCTTCHHHHHHHH--TTSSEEEECCHSTTTHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--cccc-ccceeeehhhhhhhhhh--hhcchhhhhhhhhcccc
Confidence 7899999999999999999999999999975 55555 3333 3443333332211 112 37999999998422
Q ss_pred --ccccccCCCCCc--EEEEeC
Q 045248 145 --WSTFEPNLGTNG--KVIDIT 162 (240)
Q Consensus 145 --~~~~~~~l~~~G--~iv~~g 162 (240)
....++.++..| +++.++
T Consensus 76 ~~~~~~~~a~~~~~~~~~v~~s 97 (183)
T PF13460_consen 76 DAAKNIIEAAKKAGVKRVVYLS 97 (183)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEE
T ss_pred cccccccccccccccccceeee
Confidence 333444443333 666665
No 171
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.11 E-value=0.0026 Score=51.18 Aligned_cols=95 Identities=17% Similarity=0.120 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHHHh----cCCCEEEeCCCCccccccCCCCCcccEEEe
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFVKS----LGADEVLDYKTPDGAALKSPSGRKYDAVIH 138 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d 138 (240)
.++++||-+| +|. |..++.+++ .|+ +|++++.+ ...+.+++ .+....+.....+ .......+||+|+.
T Consensus 158 ~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~---~~~~~~~~fDlVva 231 (288)
T TIGR00406 158 LKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY---LEQPIEGKADVIVA 231 (288)
T ss_pred CCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc---cccccCCCceEEEE
Confidence 5789999999 666 777777665 566 89999954 55555543 2221111100000 11112357999997
Q ss_pred CCCCC----CccccccCCCCCcEEEEeCCCc
Q 045248 139 CATGI----PWSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 139 ~~g~~----~~~~~~~~l~~~G~iv~~g~~~ 165 (240)
..... .+..+.+.|+++|.++..|...
T Consensus 232 n~~~~~l~~ll~~~~~~LkpgG~li~sgi~~ 262 (288)
T TIGR00406 232 NILAEVIKELYPQFSRLVKPGGWLILSGILE 262 (288)
T ss_pred ecCHHHHHHHHHHHHHHcCCCcEEEEEeCcH
Confidence 65432 2556778999999999887543
No 172
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.10 E-value=0.0032 Score=47.65 Aligned_cols=93 Identities=17% Similarity=0.177 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCC--CEEEEEeCc-ccHHHH----HhcC-CCEEEeCCCCccccccCCCCCcccEE
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGN--THVTASCGA-RNIEFV----KSLG-ADEVLDYKTPDGAALKSPSGRKYDAV 136 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g--~~v~~~~~~-~~~~~~----~~~g-~~~v~~~~~~~~~~~~~~~~~~~d~v 136 (240)
.++++|+-.| +|. |..++.+++..+ .+|++++.+ +..+.+ +.+| .+.+............. ....+|.|
T Consensus 39 ~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~-~~~~~D~V 115 (198)
T PRK00377 39 RKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFT-INEKFDRI 115 (198)
T ss_pred CCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhh-cCCCCCEE
Confidence 7999999999 676 888899988764 489999964 555544 4566 33222111111111111 12479999
Q ss_pred EeCCCCC----CccccccCCCCCcEEEE
Q 045248 137 IHCATGI----PWSTFEPNLGTNGKVID 160 (240)
Q Consensus 137 ~d~~g~~----~~~~~~~~l~~~G~iv~ 160 (240)
+...+.. .+..+.+.|+++|+++.
T Consensus 116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 116 FIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred EECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 9866532 26677888999999875
No 173
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.09 E-value=0.0015 Score=55.91 Aligned_cols=77 Identities=23% Similarity=0.286 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCccc---H-HHHHhcCCCEE-EeCCCCc--cccccCC--CCCcccEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARN---I-EFVKSLGADEV-LDYKTPD--GAALKSP--SGRKYDAV 136 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~---~-~~~~~~g~~~v-~~~~~~~--~~~~~~~--~~~~~d~v 136 (240)
+++++||+|++|++|..+++.+...|++|+++.++.. . +..++++...+ .|..+.+ ...+... ...++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5789999999999999999999999999998886422 2 22234554322 2433332 1111111 12369999
Q ss_pred EeCCCC
Q 045248 137 IHCATG 142 (240)
Q Consensus 137 ~d~~g~ 142 (240)
|.+.|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999983
No 174
>PRK08017 oxidoreductase; Provisional
Probab=97.09 E-value=0.0027 Score=49.82 Aligned_cols=75 Identities=24% Similarity=0.353 Sum_probs=51.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEE-eCCCCcc--c---cccCCCCCcccEEEeCC
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVL-DYKTPDG--A---ALKSPSGRKYDAVIHCA 140 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~-~~~~~~~--~---~~~~~~~~~~d~v~d~~ 140 (240)
++++|+|++|++|..+++.+...|++|+++.++ ++.+.+++.+...+. |..+... . .+....+.++|.++.+.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 579999999999999999999999999998875 666767667754332 3222211 1 11111235688999888
Q ss_pred CC
Q 045248 141 TG 142 (240)
Q Consensus 141 g~ 142 (240)
|.
T Consensus 83 g~ 84 (256)
T PRK08017 83 GF 84 (256)
T ss_pred CC
Confidence 73
No 175
>PRK04148 hypothetical protein; Provisional
Probab=97.08 E-value=0.004 Score=43.62 Aligned_cols=93 Identities=19% Similarity=0.125 Sum_probs=59.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHHHhcCCCEEEeCC-CCcc--------------------
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEVLDYK-TPDG-------------------- 122 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~-~~~~-------------------- 122 (240)
.++.+++++| .| .|...+..++..|..|++++. ++..+.+++.+...+.+.- +++.
T Consensus 15 ~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp~el~~ 92 (134)
T PRK04148 15 GKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPPRDLQP 92 (134)
T ss_pred ccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCCHHHHH
Confidence 4668999999 78 887667677788999999995 4777888877764443211 1110
Q ss_pred ccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEE
Q 045248 123 AALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVI 159 (240)
Q Consensus 123 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv 159 (240)
.+++....-+.|++|-..+++....-+++....|..+
T Consensus 93 ~~~~la~~~~~~~~i~~l~~e~~~~~~kl~ny~~~~~ 129 (134)
T PRK04148 93 FILELAKKINVPLIIKPLSGEEPIKELKLINYKGKPI 129 (134)
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCcceEEEecCCeEE
Confidence 0111223345677777777666555566666666543
No 176
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.07 E-value=0.00065 Score=46.15 Aligned_cols=92 Identities=16% Similarity=0.220 Sum_probs=57.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-hCCCEEEEEeC-cccHHHHHh----cCCCEEEeCCCCccccccCCCCCcccEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAK-LGNTHVTASCG-ARNIEFVKS----LGADEVLDYKTPDGAALKSPSGRKYDAVIHC 139 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~-~~g~~v~~~~~-~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 139 (240)
|+.+||-+| .|.|..++.+++ ..+++|++++. ++..+.+++ .+...-+.....+. ........+||+|+..
T Consensus 1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~v~~~ 77 (112)
T PF12847_consen 1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA-EFDPDFLEPFDLVICS 77 (112)
T ss_dssp TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC-HGGTTTSSCEEEEEEC
T ss_pred CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc-ccCcccCCCCCEEEEC
Confidence 578899998 345888888888 57889999995 455555542 22211111111111 1222334569999987
Q ss_pred C-CCC-C---------ccccccCCCCCcEEEE
Q 045248 140 A-TGI-P---------WSTFEPNLGTNGKVID 160 (240)
Q Consensus 140 ~-g~~-~---------~~~~~~~l~~~G~iv~ 160 (240)
. ... . ++.+.+.|+|+|+++.
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 78 GFTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp SGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 7 321 1 4667788999999875
No 177
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.06 E-value=0.017 Score=43.50 Aligned_cols=76 Identities=18% Similarity=0.154 Sum_probs=47.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-Hhc----CCCEE-EeCCCCccccccCCCCCcccEEEe
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSL----GADEV-LDYKTPDGAALKSPSGRKYDAVIH 138 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~----g~~~v-~~~~~~~~~~~~~~~~~~~d~v~d 138 (240)
++.+++|+|++|++|...+..+...|++|+.+.++ ++.+.+ +++ +.... .+..+.+ ...+.. .+.|+||.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~-~~~~~~--~~~diVi~ 103 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDA-ARAAAI--KGADVVFA 103 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHH-HHHHHH--hcCCEEEE
Confidence 67899999988999999888888889999888865 444333 222 22211 1111111 111111 36899999
Q ss_pred CCCCCC
Q 045248 139 CATGIP 144 (240)
Q Consensus 139 ~~g~~~ 144 (240)
++....
T Consensus 104 at~~g~ 109 (194)
T cd01078 104 AGAAGV 109 (194)
T ss_pred CCCCCc
Confidence 887543
No 178
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0045 Score=48.35 Aligned_cols=35 Identities=26% Similarity=0.347 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+|++|++|..+++.+...|++|+.+.+.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 56899999999999999999888899999888764
No 179
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.01 E-value=0.003 Score=55.04 Aligned_cols=40 Identities=23% Similarity=0.206 Sum_probs=35.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHH
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIE 104 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~ 104 (240)
+.|+++||.||+|++|..+++.+...|++|+++.+. ++.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~ 118 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAE 118 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 789999999999999999999998899999999875 4443
No 180
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.99 E-value=0.0041 Score=45.18 Aligned_cols=88 Identities=10% Similarity=0.046 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPW 145 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 145 (240)
.|.+|+|+| +|.+|..-++.+...|++|+++.. +..+.+++++... ...+. .+...-.++|+|+-+++.+..
T Consensus 12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp-~~~~~l~~l~~i~-~~~~~-----~~~~dl~~a~lViaaT~d~e~ 83 (157)
T PRK06719 12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSP-EICKEMKELPYIT-WKQKT-----FSNDDIKDAHLIYAATNQHAV 83 (157)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC-ccCHHHHhccCcE-EEecc-----cChhcCCCceEEEECCCCHHH
Confidence 789999999 899999999988889999888853 3333344454222 11111 111122568999999987665
Q ss_pred cccccCCCCCcEEEEe
Q 045248 146 STFEPNLGTNGKVIDI 161 (240)
Q Consensus 146 ~~~~~~l~~~G~iv~~ 161 (240)
+..+...++.+.++..
T Consensus 84 N~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 84 NMMVKQAAHDFQWVNV 99 (157)
T ss_pred HHHHHHHHHHCCcEEE
Confidence 5444444333334433
No 181
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.99 E-value=0.0069 Score=49.32 Aligned_cols=98 Identities=17% Similarity=0.161 Sum_probs=63.6
Q ss_pred hhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC--EEEEEeCc-ccHHHH----HhcCCCEEEeCCCCccccccC
Q 045248 55 QSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT--HVTASCGA-RNIEFV----KSLGADEVLDYKTPDGAALKS 127 (240)
Q Consensus 55 ~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~--~v~~~~~~-~~~~~~----~~~g~~~v~~~~~~~~~~~~~ 127 (240)
+...+ +++++||.+| +| .|..++.+++..+. +|++++.+ +..+.+ ++.|.+.+............
T Consensus 74 ~~L~i-----~~g~~VLDIG-~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~- 145 (322)
T PRK13943 74 EWVGL-----DKGMRVLEIG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVP- 145 (322)
T ss_pred HhcCC-----CCCCEEEEEe-CC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhccc-
Confidence 45556 7889999999 55 69999999998764 68888854 444333 45676543322111111111
Q ss_pred CCCCcccEEEeCCCCCC-ccccccCCCCCcEEEEe
Q 045248 128 PSGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 128 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~ 161 (240)
....||+|+.+.+... ....++.|+++|+++..
T Consensus 146 -~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 146 -EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred -ccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 1246999999887533 45677899999998763
No 182
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0034 Score=48.23 Aligned_cols=75 Identities=25% Similarity=0.329 Sum_probs=50.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCC-EEEeCCCCc--cccccCCCCCcccEEEeCCCC
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGAD-EVLDYKTPD--GAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~-~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~ 142 (240)
++++|+|++|++|..+++.+...|++|+.+.++ +..+.++..+.. ...|..+.. ........+.++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 478999999999999998888889999998865 555555555543 122222222 111122233579999999874
No 183
>PRK06196 oxidoreductase; Provisional
Probab=96.95 E-value=0.0029 Score=51.50 Aligned_cols=77 Identities=22% Similarity=0.235 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcCCCEEE--eCCCCc-c-ccccC--CCCCcccEEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLGADEVL--DYKTPD-G-AALKS--PSGRKYDAVI 137 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~v~--~~~~~~-~-~~~~~--~~~~~~d~v~ 137 (240)
.+++++|+||+|++|..+++.+...|++|+.++++ ++.+.+ +++.....+ |..+.. . ..+.. ....++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 56899999999999999999888899999998875 443332 233212222 222221 1 11111 1125799999
Q ss_pred eCCCC
Q 045248 138 HCATG 142 (240)
Q Consensus 138 d~~g~ 142 (240)
.++|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99983
No 184
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.0024 Score=50.41 Aligned_cols=78 Identities=26% Similarity=0.262 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCCc-hHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH----h-cCCCEE--E--eCCCCc--cccccC--CC
Q 045248 65 GQQKNILVTAASG-GVGHYAVQLAKLGNTHVTASCGA-RNIEFVK----S-LGADEV--L--DYKTPD--GAALKS--PS 129 (240)
Q Consensus 65 ~~g~~vlV~G~~g-~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~----~-~g~~~v--~--~~~~~~--~~~~~~--~~ 129 (240)
.++++++|+|++| ++|.++++.+...|++|+.+++. ++.+... + +|...+ + |..+.+ ...++. ..
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4678999999886 89999999999999999888864 4433332 2 453322 2 222221 111111 11
Q ss_pred CCcccEEEeCCCC
Q 045248 130 GRKYDAVIHCATG 142 (240)
Q Consensus 130 ~~~~d~v~d~~g~ 142 (240)
..++|+++.+.|.
T Consensus 95 ~g~id~li~~ag~ 107 (262)
T PRK07831 95 LGRLDVLVNNAGL 107 (262)
T ss_pred cCCCCEEEECCCC
Confidence 2468999999984
No 185
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0023 Score=51.58 Aligned_cols=77 Identities=21% Similarity=0.151 Sum_probs=50.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH-HHhcCCC-EE----EeCCCCc-c-ccccC--CCCCccc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF-VKSLGAD-EV----LDYKTPD-G-AALKS--PSGRKYD 134 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~-~~~~g~~-~v----~~~~~~~-~-~~~~~--~~~~~~d 134 (240)
.++++||+||+|++|..+++.+...|++|+.+.++ ++.+. .++++.. .+ .|..+.+ . ..+.. ....++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 67899999999999999999999999999998875 44433 3445421 11 2323222 1 11111 0124699
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
++|.+.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999984
No 186
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.92 E-value=0.011 Score=45.88 Aligned_cols=96 Identities=20% Similarity=0.220 Sum_probs=65.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeC-cccHHHHH----hcCCCEEEeCCCCccccccCCCCCcccEEEe
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCG-ARNIEFVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVIH 138 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~-~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d 138 (240)
++|.+||=+| +|.|-.+..+++..|. +|++++- +.-++.++ +.|... +.+-..+...+. ..+..||++.-
T Consensus 50 ~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dAe~LP-f~D~sFD~vt~ 125 (238)
T COG2226 50 KPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDAENLP-FPDNSFDAVTI 125 (238)
T ss_pred CCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEechhhCC-CCCCccCEEEe
Confidence 5789998775 7789999999998886 9999995 45555554 333332 322222222222 23466899877
Q ss_pred CCC-----C--CCccccccCCCCCcEEEEeCCC
Q 045248 139 CAT-----G--IPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 139 ~~g-----~--~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
+.| . ..+.++.+-|+|+|+++++...
T Consensus 126 ~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~ 158 (238)
T COG2226 126 SFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFS 158 (238)
T ss_pred eehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcC
Confidence 776 1 2277888999999998888743
No 187
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.0035 Score=49.57 Aligned_cols=77 Identities=18% Similarity=0.272 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCC-EEE--eCCCCc--cccccCC--CCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGAD-EVL--DYKTPD--GAALKSP--SGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~-~v~--~~~~~~--~~~~~~~--~~~~~ 133 (240)
+++++||+|++|++|..+++.+...|++|+.+.++ ++.+.+ ++.+.. ..+ |..++. ...+... .-.++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999875 443332 222322 222 222222 1111111 11469
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999873
No 188
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0035 Score=49.62 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-hc----CCC-EEE--eCCCCc--cccccC-CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-SL----GAD-EVL--DYKTPD--GAALKS-PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~----g~~-~v~--~~~~~~--~~~~~~-~~~~~~ 133 (240)
.++++||+|+++++|.++++.+...|++|+.+.++ ++.+.+. ++ +.. ..+ |-.+.. ...+.. ..-.++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 57899999999999999999999999999998865 4433332 21 322 222 222222 111111 122469
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.+.|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999999984
No 189
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.88 E-value=0.0063 Score=46.30 Aligned_cols=90 Identities=13% Similarity=0.152 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc--ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA--RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~--~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 143 (240)
.|++|||+| +|.+|..-++.+...|++|+++++. +..+.+.+.|....+. .+.....+ .++++|+-+.+.+
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~~~dl-----~~~~lVi~at~d~ 80 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLA-RCFDADIL-----EGAFLVIAATDDE 80 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEe-CCCCHHHh-----CCcEEEEECCCCH
Confidence 678999999 8999999999999999999988864 3444444444222221 22111111 4689999888875
Q ss_pred C-ccccccCCCCCcEEEEeC
Q 045248 144 P-WSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 144 ~-~~~~~~~l~~~G~iv~~g 162 (240)
. -.......+..|..|.+-
T Consensus 81 ~ln~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 81 ELNRRVAHAARARGVPVNVV 100 (205)
T ss_pred HHHHHHHHHHHHcCCEEEEC
Confidence 3 334444555667666544
No 190
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.86 E-value=0.025 Score=45.15 Aligned_cols=96 Identities=20% Similarity=0.214 Sum_probs=67.2
Q ss_pred hhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCC
Q 045248 40 SGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYK 118 (240)
Q Consensus 40 a~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~ 118 (240)
...||+....+..+ +..++. -.|++++|+|.+.-+|.-+..++...|++|+.+.+. ..++.
T Consensus 136 ~~~PcTp~ai~~ll-~~~~i~----l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~------------- 197 (286)
T PRK14175 136 TFVPCTPLGIMEIL-KHADID----LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMAS------------- 197 (286)
T ss_pred CCCCCcHHHHHHHH-HHcCCC----CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHH-------------
Confidence 34577776666666 555543 389999999955559999999999999999888753 11110
Q ss_pred CCccccccCCCCCcccEEEeCCCCCC-ccccccCCCCCcEEEEeCCCc
Q 045248 119 TPDGAALKSPSGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 119 ~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~~ 165 (240)
.. ...|+||-++|.+. +.. +.++++..++.+|...
T Consensus 198 -----~~-----~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 198 -----YL-----KDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred -----HH-----hhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 00 34788888888764 333 4578888888888643
No 191
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0043 Score=49.00 Aligned_cols=77 Identities=19% Similarity=0.251 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-hc--CC-CEEE--eCCCCc-c-ccccCC-CCCcccE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-SL--GA-DEVL--DYKTPD-G-AALKSP-SGRKYDA 135 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~--g~-~~v~--~~~~~~-~-~~~~~~-~~~~~d~ 135 (240)
+++++||+||+|++|..+++.+...|++|++++++ ++.+.+. ++ +. ...+ |..+.. . ...+.. ...++|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 56789999999999999999888999999999975 4444332 22 21 1222 222211 0 111110 1256899
Q ss_pred EEeCCCC
Q 045248 136 VIHCATG 142 (240)
Q Consensus 136 v~d~~g~ 142 (240)
++.++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999884
No 192
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.84 E-value=0.0043 Score=48.98 Aligned_cols=76 Identities=20% Similarity=0.217 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHh-cCCC-EEE--eCCCCc--cccccC--CCCCcccEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKS-LGAD-EVL--DYKTPD--GAALKS--PSGRKYDAV 136 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~-~g~~-~v~--~~~~~~--~~~~~~--~~~~~~d~v 136 (240)
++++++|+||+|++|..+++.+...|++|+.+.++ ++.+.+++ .+.. ..+ |..+.. ...++. ..-.++|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 57899999999999999999999999999998865 44444443 2321 122 222211 111111 011468999
Q ss_pred EeCCC
Q 045248 137 IHCAT 141 (240)
Q Consensus 137 ~d~~g 141 (240)
+.+.|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99987
No 193
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.004 Score=49.64 Aligned_cols=77 Identities=19% Similarity=0.145 Sum_probs=49.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhc-CC-CEEE--eCCCCc--cccccCC--CCCcccEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSL-GA-DEVL--DYKTPD--GAALKSP--SGRKYDAV 136 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~-g~-~~v~--~~~~~~--~~~~~~~--~~~~~d~v 136 (240)
.++++||+|++|++|..+++.+...|++|++++++ ++.+.+.+. +. ...+ |..+.. ...++.. .-.++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46789999999999999999999899999999975 555444332 22 1122 222221 1111110 11358999
Q ss_pred EeCCCC
Q 045248 137 IHCATG 142 (240)
Q Consensus 137 ~d~~g~ 142 (240)
+.+.|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999984
No 194
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0041 Score=48.78 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCC-EEE--eCCCCc--cccccCC--CCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGAD-EVL--DYKTPD--GAALKSP--SGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~-~v~--~~~~~~--~~~~~~~--~~~~~ 133 (240)
.++++||+|++|++|..+++.+...|++|+.+.++ ++.+.+ +..+.. ..+ |..+.. ...+... .-.++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999998865 443333 223322 122 222221 1111110 11469
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.+.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999999873
No 195
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0028 Score=49.70 Aligned_cols=77 Identities=21% Similarity=0.189 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCE--EE--eCCCCc-c-ccccCC--CCCcccEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADE--VL--DYKTPD-G-AALKSP--SGRKYDAV 136 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~--v~--~~~~~~-~-~~~~~~--~~~~~d~v 136 (240)
+++++||+||+|++|..+++.+...|++|+.+.++ +..+...+..... .+ |..+.. . ..+... ...++|++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v 93 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL 93 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 57899999999999999999888999999998875 3333333332211 22 222211 1 111111 12468999
Q ss_pred EeCCCC
Q 045248 137 IHCATG 142 (240)
Q Consensus 137 ~d~~g~ 142 (240)
+.++|.
T Consensus 94 i~~ag~ 99 (255)
T PRK06841 94 VNSAGV 99 (255)
T ss_pred EECCCC
Confidence 999984
No 196
>PRK06194 hypothetical protein; Provisional
Probab=96.79 E-value=0.0044 Score=49.57 Aligned_cols=77 Identities=13% Similarity=0.092 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-H---hcCCC-EEEeCCCCccccc----cC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-K---SLGAD-EVLDYKTPDGAAL----KS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~---~~g~~-~v~~~~~~~~~~~----~~--~~~~~~ 133 (240)
.++++||+||+|++|..+++.+...|++|+.+++. ++.+.. + ..+.. .++..+-.+...+ .. ...+++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 56889999999999999999999999999988864 333222 2 22332 1222221111111 10 112468
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.++|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999984
No 197
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.0052 Score=48.40 Aligned_cols=78 Identities=14% Similarity=0.121 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-hcCCC--EEE--eCCCCc-c-ccccCC--CCCccc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-SLGAD--EVL--DYKTPD-G-AALKSP--SGRKYD 134 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~--~v~--~~~~~~-~-~~~~~~--~~~~~d 134 (240)
-++.++||+||+|++|..+++.+...|++|+.+.++ +..+.+. +.... .++ |..++. . ..+... .-.++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 477899999999999999999999999999999875 4443332 22211 222 222222 1 111110 113699
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
+||.+.|.
T Consensus 89 ~vi~~ag~ 96 (264)
T PRK12829 89 VLVNNAGI 96 (264)
T ss_pred EEEECCCC
Confidence 99999985
No 198
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0096 Score=46.94 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=30.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
+++||.|++|++|..+++.+...|++|+.++++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~ 34 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARN 34 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 579999999999999999999999999999865
No 199
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.77 E-value=0.0041 Score=48.60 Aligned_cols=77 Identities=14% Similarity=0.151 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCCE-EE--eCCCCc-c-ccccCC--CCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGADE-VL--DYKTPD-G-AALKSP--SGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~~-v~--~~~~~~-~-~~~~~~--~~~~~ 133 (240)
+++++||+|++|++|..+++.+...|++|+.++++ ++.+.+ +..+... .+ |..+.. . ..++.. ...++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999888865 333322 3334431 22 212211 1 111111 11468
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|.+|.++|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999983
No 200
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0065 Score=47.79 Aligned_cols=78 Identities=19% Similarity=0.193 Sum_probs=48.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhC-CCEEEEEeCc-cc-HH----HHHhcCC--CEEE--eCCCCc--cccccC-CCC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLG-NTHVTASCGA-RN-IE----FVKSLGA--DEVL--DYKTPD--GAALKS-PSG 130 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~-g~~v~~~~~~-~~-~~----~~~~~g~--~~v~--~~~~~~--~~~~~~-~~~ 130 (240)
..+++++|+||+|++|..+++-+... |++|+.+.++ ++ .+ .+++.+. ..++ |..+.. ...++. ...
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 57789999999999999998876666 4899999865 33 33 2333342 1233 222222 111111 112
Q ss_pred CcccEEEeCCCC
Q 045248 131 RKYDAVIHCATG 142 (240)
Q Consensus 131 ~~~d~v~d~~g~ 142 (240)
.++|+++.+.|.
T Consensus 86 g~id~li~~ag~ 97 (253)
T PRK07904 86 GDVDVAIVAFGL 97 (253)
T ss_pred CCCCEEEEeeec
Confidence 479999988874
No 201
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.75 E-value=0.0047 Score=48.75 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-hcCCC-EEE--eCCCCc--cccccC--CCCCcccEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-SLGAD-EVL--DYKTPD--GAALKS--PSGRKYDAV 136 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~-~v~--~~~~~~--~~~~~~--~~~~~~d~v 136 (240)
++++++|+||+|++|..+++.+...|++|+.+.++ ++.+.+. +++.. ..+ |..+.. ...++. ....++|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 57899999999999999999999999999998875 4544443 33321 222 222211 111111 112468999
Q ss_pred EeCCCC
Q 045248 137 IHCATG 142 (240)
Q Consensus 137 ~d~~g~ 142 (240)
+.++|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999983
No 202
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.75 E-value=0.0053 Score=53.17 Aligned_cols=71 Identities=11% Similarity=0.047 Sum_probs=51.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 143 (240)
.++++|+|+| .|..|++++++++..|++|++.+.. .+.+.++++|.. ++.... ....+ ..+|+|+.+.|-+
T Consensus 10 ~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~-~~~~~~-~~~~l-----~~~D~VV~SpGi~ 81 (488)
T PRK03369 10 LPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVA-TVSTSD-AVQQI-----ADYALVVTSPGFR 81 (488)
T ss_pred cCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCE-EEcCcc-hHhHh-----hcCCEEEECCCCC
Confidence 5789999999 9999999999999999999998854 455556777763 332211 11111 3479999999843
No 203
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.0059 Score=47.30 Aligned_cols=77 Identities=18% Similarity=0.126 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH-HHhcC---CCEEEe--CCCCc-c-ccccCC--CCCccc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF-VKSLG---ADEVLD--YKTPD-G-AALKSP--SGRKYD 134 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~-~~~~g---~~~v~~--~~~~~-~-~~~~~~--~~~~~d 134 (240)
.+.+++|+||+|++|..+++.+...|++|+++.++ ++.+. .+++. ....+. ..+.. . ..+... ...++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 56899999999999999998888889999999864 44332 23332 112222 22211 1 111110 113699
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99999874
No 204
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.71 E-value=0.0046 Score=50.48 Aligned_cols=76 Identities=26% Similarity=0.443 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcC---CC-EEE--eCCCCc--cccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLG---AD-EVL--DYKTPD--GAALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g---~~-~v~--~~~~~~--~~~~~~--~~~~~~ 133 (240)
++++++|+||+|++|..+++.+...|++|+.++++ ++.+.+ +++. .. ..+ |..+.. ...... ....++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 67899999999999999999888899999999875 443332 3332 11 122 222211 111111 123469
Q ss_pred cEEEeCCC
Q 045248 134 DAVIHCAT 141 (240)
Q Consensus 134 d~v~d~~g 141 (240)
|++|.++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999998
No 205
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.71 E-value=0.03 Score=44.76 Aligned_cols=76 Identities=12% Similarity=0.079 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCCch-HHHHHHHHHHhCCCEEEEEeCcccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC
Q 045248 65 GQQKNILVTAASGG-VGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 65 ~~g~~vlV~G~~g~-vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 143 (240)
-.|++++|+| .|+ +|..+..++...|+.|+.+.+. ..+..+.+ ..+|+++.++|.+
T Consensus 157 l~Gk~vvViG-~gg~vGkpia~~L~~~gatVtv~~~~-t~~L~~~~---------------------~~aDIvI~AtG~~ 213 (283)
T PRK14192 157 LAGKHAVVVG-RSAILGKPMAMMLLNANATVTICHSR-TQNLPELV---------------------KQADIIVGAVGKP 213 (283)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHhCCCEEEEEeCC-chhHHHHh---------------------ccCCEEEEccCCC
Confidence 4889999999 565 9999999999999976666542 11111111 3588999999864
Q ss_pred CccccccCCCCCcEEEEeCCC
Q 045248 144 PWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 144 ~~~~~~~~l~~~G~iv~~g~~ 164 (240)
.+ --.+.++++..++.+|..
T Consensus 214 ~~-v~~~~lk~gavViDvg~n 233 (283)
T PRK14192 214 EL-IKKDWIKQGAVVVDAGFH 233 (283)
T ss_pred Cc-CCHHHcCCCCEEEEEEEe
Confidence 42 223568888888888754
No 206
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.0064 Score=47.42 Aligned_cols=77 Identities=22% Similarity=0.214 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH-HHhcCCCE-EE--eCCCCc-c-ccccC--CCCCcccEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF-VKSLGADE-VL--DYKTPD-G-AALKS--PSGRKYDAV 136 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~-~~~~g~~~-v~--~~~~~~-~-~~~~~--~~~~~~d~v 136 (240)
++++++|.||+|++|..+++.+...|++|+.++++ ++.+. .++++... .+ |..+.. . ...+. ....++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 56899999999999999999999999999998865 33333 34555432 22 222211 1 11111 112468999
Q ss_pred EeCCCC
Q 045248 137 IHCATG 142 (240)
Q Consensus 137 ~d~~g~ 142 (240)
+.+.|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999874
No 207
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.69 E-value=0.008 Score=45.63 Aligned_cols=91 Identities=10% Similarity=-0.005 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc--cHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR--NIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 143 (240)
.+++|||+| +|.+|...++.+...|++|+++.++- ....+.+.+... +........ .-.++|+||-+++.+
T Consensus 9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~-~~~~~~~~~-----~l~~adlViaaT~d~ 81 (202)
T PRK06718 9 SNKRVVIVG-GGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIR-WKQKEFEPS-----DIVDAFLVIAATNDP 81 (202)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEE-EEecCCChh-----hcCCceEEEEcCCCH
Confidence 788999999 89999999988888999998887542 222222223211 111111111 124689999999876
Q ss_pred CccccccCCCCCcEEEEeCC
Q 045248 144 PWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 144 ~~~~~~~~l~~~G~iv~~g~ 163 (240)
.++..+...+..+.++..-.
T Consensus 82 elN~~i~~~a~~~~lvn~~d 101 (202)
T PRK06718 82 RVNEQVKEDLPENALFNVIT 101 (202)
T ss_pred HHHHHHHHHHHhCCcEEECC
Confidence 65544443334455555543
No 208
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.68 E-value=0.022 Score=39.11 Aligned_cols=92 Identities=17% Similarity=0.237 Sum_probs=58.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCC-CEEEEEeCc-ccHHHH----HhcCCCE--EEeCCCCccccccCCCCCcccEE
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGN-THVTASCGA-RNIEFV----KSLGADE--VLDYKTPDGAALKSPSGRKYDAV 136 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g-~~v~~~~~~-~~~~~~----~~~g~~~--v~~~~~~~~~~~~~~~~~~~d~v 136 (240)
.++++++-+| +|. |..+..+++..+ .+|++++.+ ...+.+ +.++... ++..+.. .... .....+|+|
T Consensus 18 ~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~D~v 92 (124)
T TIGR02469 18 RPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAP--EALE-DSLPEPDRV 92 (124)
T ss_pred CCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccc--ccCh-hhcCCCCEE
Confidence 6778999999 655 888999998875 599999954 444444 3444332 2211111 0011 122479999
Q ss_pred EeCCCCC----CccccccCCCCCcEEEEe
Q 045248 137 IHCATGI----PWSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 137 ~d~~g~~----~~~~~~~~l~~~G~iv~~ 161 (240)
+-..+.. .++.+.+.|+++|.++..
T Consensus 93 ~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 93 FIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred EECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 8765432 377788899999998754
No 209
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.68 E-value=0.006 Score=51.26 Aligned_cols=36 Identities=22% Similarity=0.303 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
..+.+|||+||+|.+|..+++.+...|.+|++++++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~ 93 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVARE 93 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEec
Confidence 467899999999999999999998899999999864
No 210
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.68 E-value=0.01 Score=53.17 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=53.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc----------------------cHHHHHhcCCCEEEeCCCCccc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR----------------------NIEFVKSLGADEVLDYKTPDGA 123 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~----------------------~~~~~~~~g~~~v~~~~~~~~~ 123 (240)
.+++|+|+| +|+.|+.+...+...|.+|++..+.. +.+.++++|.+..++..-....
T Consensus 309 ~~kkVaIIG-~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIG-AGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 589999999 89999999999999999988887542 3456678887655443221111
Q ss_pred cccCCCCCcccEEEeCCCCC
Q 045248 124 ALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 124 ~~~~~~~~~~d~v~d~~g~~ 143 (240)
.+.. ...++|.||.++|..
T Consensus 388 ~~~~-l~~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSD-LTSEYDAVFIGVGTY 406 (639)
T ss_pred CHHH-HHhcCCEEEEeCCCC
Confidence 1111 124699999999963
No 211
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.007 Score=49.77 Aligned_cols=77 Identities=18% Similarity=0.241 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH----HHhcCCCEE-E--eCCCCc-c-ccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF----VKSLGADEV-L--DYKTPD-G-AALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~----~~~~g~~~v-~--~~~~~~-~-~~~~~--~~~~~~ 133 (240)
.+++++|+||+|++|..+++.+...|++|+.++++ ++.+. +++.|.... + |..+.. . ...+. ..-.++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 56899999999999999999999999999998875 44332 234454322 2 222222 1 11111 011469
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|++|+++|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999984
No 212
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.0051 Score=48.21 Aligned_cols=76 Identities=18% Similarity=0.284 Sum_probs=47.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCC-EEE--eCCCCc-c-ccccCC--CCCccc
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGAD-EVL--DYKTPD-G-AALKSP--SGRKYD 134 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~-~v~--~~~~~~-~-~~~~~~--~~~~~d 134 (240)
+++++|.|++|++|..+++.+...|++|++++++ ++.+.+ ++.+.. ..+ |..++. . ..+... .-.++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 4689999999999999999999999999998864 433333 223322 223 222221 1 111111 114689
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
+++.+.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999873
No 213
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.0073 Score=47.36 Aligned_cols=77 Identities=19% Similarity=0.250 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCCE-EE--eCCCCc--cccccCC--CCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGADE-VL--DYKTPD--GAALKSP--SGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~~-v~--~~~~~~--~~~~~~~--~~~~~ 133 (240)
.+++++|+|++|++|..+++.+...|++|+.++++ ++.+.+ ++.+... .+ |..+.+ ...++.. .-.++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 56899999999999999999999999999999864 443332 3334322 22 222221 1111110 12369
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999984
No 214
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=96.64 E-value=0.02 Score=46.16 Aligned_cols=92 Identities=25% Similarity=0.275 Sum_probs=66.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-hCCC-EEEEEeCcccHHHHHhcCC-CEEEeCCCCccccccCCCCCcccEEEeCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAK-LGNT-HVTASCGARNIEFVKSLGA-DEVLDYKTPDGAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~-~~g~-~v~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 142 (240)
..+.|+|..|++-.++.+...++ ..+. +++.+++.....+.+.+|. +.|+.|++-+ ......--+++|+.|+
T Consensus 135 ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~Fve~lg~Yd~V~~Yd~i~-----~l~~~~~~v~VDfaG~ 209 (314)
T PF11017_consen 135 GAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVAFVESLGCYDEVLTYDDID-----SLDAPQPVVIVDFAGN 209 (314)
T ss_pred CccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchhhhhccCCceEEeehhhhh-----hccCCCCEEEEECCCC
Confidence 45788888989989998888888 4554 9999999999999999995 7888776532 1222456689999998
Q ss_pred CC-ccccccCCCCCc-EEEEeC
Q 045248 143 IP-WSTFEPNLGTNG-KVIDIT 162 (240)
Q Consensus 143 ~~-~~~~~~~l~~~G-~iv~~g 162 (240)
.. ...+-+.++..= ..+.+|
T Consensus 210 ~~~~~~Lh~~l~d~l~~~~~VG 231 (314)
T PF11017_consen 210 GEVLAALHEHLGDNLVYSCLVG 231 (314)
T ss_pred HHHHHHHHHHHhhhhhEEEEEE
Confidence 55 444555555542 455555
No 215
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.0084 Score=47.22 Aligned_cols=75 Identities=24% Similarity=0.228 Sum_probs=48.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-hcC-C-CEEE--eCCCCc--cccccCC---CCCcccEE
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-SLG-A-DEVL--DYKTPD--GAALKSP---SGRKYDAV 136 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g-~-~~v~--~~~~~~--~~~~~~~---~~~~~d~v 136 (240)
+++||+||+|++|..+++.+...|++|+.+.++ ++.+.+. ..+ . ..++ |..+.. ...+... ...++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 579999999999999999888899999999865 4444443 232 1 1222 333222 1111111 13579999
Q ss_pred EeCCCC
Q 045248 137 IHCATG 142 (240)
Q Consensus 137 ~d~~g~ 142 (240)
+.++|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999984
No 216
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.0085 Score=46.73 Aligned_cols=77 Identities=18% Similarity=0.209 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCC-EEE--eCCCCc--cccccCC--CCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGAD-EVL--DYKTPD--GAALKSP--SGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~-~v~--~~~~~~--~~~~~~~--~~~~~ 133 (240)
++++++|+|++|++|..++..+...|++|+++.++ ++.+.. +..+.. .++ |..+.. ...++.. .-.++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999988864 433322 233332 222 222221 1111111 11479
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999984
No 217
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.0081 Score=47.29 Aligned_cols=35 Identities=23% Similarity=0.148 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|.|++|++|..+++.+...|++|+.+.++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999999999998864
No 218
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.57 E-value=0.0096 Score=46.46 Aligned_cols=77 Identities=21% Similarity=0.167 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc--c-HHHHHhcCCC-EEE--eCCCCc-c-ccccC--CCCCcccE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR--N-IEFVKSLGAD-EVL--DYKTPD-G-AALKS--PSGRKYDA 135 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~--~-~~~~~~~g~~-~v~--~~~~~~-~-~~~~~--~~~~~~d~ 135 (240)
.+++++|+|++|++|..+++.+...|++|+.++++. + .+.+++.+.. ..+ |..+.+ . ..++. ....++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 678999999999999999999999999999988643 1 2333444432 222 222221 1 11111 11246999
Q ss_pred EEeCCCC
Q 045248 136 VIHCATG 142 (240)
Q Consensus 136 v~d~~g~ 142 (240)
++.+.|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9999874
No 219
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.012 Score=46.67 Aligned_cols=77 Identities=17% Similarity=0.094 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcCCCEEE--eCCCCcc--ccccC--CCCCcccEEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLGADEVL--DYKTPDG--AALKS--PSGRKYDAVI 137 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~v~--~~~~~~~--~~~~~--~~~~~~d~v~ 137 (240)
.+++++|+||+|++|..+++.+...|++|+.+.++ ++.+.+ ++++...++ |..+.+. ..+.. ..-.++|+++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46799999999999999998888899999888865 444433 444422222 3333221 11111 1114699999
Q ss_pred eCCCC
Q 045248 138 HCATG 142 (240)
Q Consensus 138 d~~g~ 142 (240)
.+.|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99984
No 220
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.55 E-value=0.053 Score=43.16 Aligned_cols=91 Identities=12% Similarity=0.149 Sum_probs=56.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHH-HHHhc---CCCEEEeCCCCccccccCCCCCcccEEEeC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIE-FVKSL---GADEVLDYKTPDGAALKSPSGRKYDAVIHC 139 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~-~~~~~---g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 139 (240)
..+++++|+| +|++|.+++..+...|++|+++.++ ++.+ .++++ |....+...+ .....+|+|++|
T Consensus 115 ~~~k~vliiG-aGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~--------~~~~~~DivIna 185 (270)
T TIGR00507 115 RPNQRVLIIG-AGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE--------LPLHRVDLIINA 185 (270)
T ss_pred ccCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh--------hcccCccEEEEC
Confidence 4578999999 6999999998888889988888765 4433 33333 2212221111 111358999999
Q ss_pred CCCCC---cc---ccccCCCCCcEEEEeCCC
Q 045248 140 ATGIP---WS---TFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 140 ~g~~~---~~---~~~~~l~~~G~iv~~g~~ 164 (240)
++... .. .....++++..++.+...
T Consensus 186 tp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~ 216 (270)
T TIGR00507 186 TSAGMSGNIDEPPVPAEKLKEGMVVYDMVYN 216 (270)
T ss_pred CCCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence 97521 11 112346676677766543
No 221
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.55 E-value=0.024 Score=47.88 Aligned_cols=72 Identities=11% Similarity=0.172 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccH-HHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNI-EFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 142 (240)
.+.+++|+| +|++|.+++..+...|+ +++++.++ ++. +.+++++...++.+.+. ...+ ..+|+||.|++.
T Consensus 180 ~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l-~~~l-----~~aDiVI~aT~a 252 (414)
T PRK13940 180 SSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSEL-PQLI-----KKADIIIAAVNV 252 (414)
T ss_pred cCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHH-HHHh-----ccCCEEEECcCC
Confidence 678999999 89999999999999998 67777765 443 44455652233332211 1111 348999999997
Q ss_pred CC
Q 045248 143 IP 144 (240)
Q Consensus 143 ~~ 144 (240)
+.
T Consensus 253 ~~ 254 (414)
T PRK13940 253 LE 254 (414)
T ss_pred CC
Confidence 55
No 222
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.53 E-value=0.0092 Score=51.41 Aligned_cols=77 Identities=17% Similarity=0.169 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc----------------------cHHHHHhcCCCEEEeCCCCcc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR----------------------NIEFVKSLGADEVLDYKTPDG 122 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~----------------------~~~~~~~~g~~~v~~~~~~~~ 122 (240)
+.+++|+|+| +|+.|+.+...++..|.+|+...... ..+.++++|.+..++......
T Consensus 139 ~~~~~V~IIG-~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 217 (467)
T TIGR01318 139 PTGKRVAVIG-AGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRD 217 (467)
T ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCc
Confidence 4688999999 89999999999999999988877432 245667888764443321111
Q ss_pred ccccCCCCCcccEEEeCCCCC
Q 045248 123 AALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 123 ~~~~~~~~~~~d~v~d~~g~~ 143 (240)
...... ..++|.||.++|..
T Consensus 218 ~~~~~~-~~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 ISLDDL-LEDYDAVFLGVGTY 237 (467)
T ss_pred cCHHHH-HhcCCEEEEEeCCC
Confidence 011111 13699999999963
No 223
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.53 E-value=0.0099 Score=48.43 Aligned_cols=71 Identities=28% Similarity=0.368 Sum_probs=47.6
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEE-eCCCCccccccCCCCCcccEEEeCCCC
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~ 142 (240)
+|+|+||+|-+|..+++.+...|.+|.+++++ ++...+...+.+.+. |..+.. ...... .++|+||.+++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~-~l~~al--~g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPE-TLPPSF--KGVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHH-HHHHHH--CCCCEEEECCCC
Confidence 69999999999999999999899999999975 444444445544322 222221 111111 368999998763
No 224
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.0086 Score=47.27 Aligned_cols=77 Identities=17% Similarity=0.122 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH-HHhcCCC-EEE--eCCCCc--cccccC--CCCCcccEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF-VKSLGAD-EVL--DYKTPD--GAALKS--PSGRKYDAV 136 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~-~~~~g~~-~v~--~~~~~~--~~~~~~--~~~~~~d~v 136 (240)
.+++++|.|++|++|..+++.+...|++|+.++++ ++.+. .++++.. ..+ |..+.. ...++. ..-..+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 56899999999999999999999999999999875 43333 3444532 222 222221 111111 112468999
Q ss_pred EeCCCC
Q 045248 137 IHCATG 142 (240)
Q Consensus 137 ~d~~g~ 142 (240)
+.+.|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 999873
No 225
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.0076 Score=46.57 Aligned_cols=35 Identities=20% Similarity=0.235 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
+++++||+|++|++|..+++.+...|++|+.+.++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~ 40 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRG 40 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCC
Confidence 57899999999999999999888889999999874
No 226
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.50 E-value=0.0095 Score=46.76 Aligned_cols=77 Identities=16% Similarity=0.130 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc--c-HHHHHhcCCCE-EE--eCCCCc--cccccC--CCCCcccE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR--N-IEFVKSLGADE-VL--DYKTPD--GAALKS--PSGRKYDA 135 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~--~-~~~~~~~g~~~-v~--~~~~~~--~~~~~~--~~~~~~d~ 135 (240)
.+++++|+||++++|.++++.+...|++|+.+.+.+ + .+..++.+... .+ |..+.. ...++. ..-+++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 678999999999999999999999999998887542 1 23334455321 22 222222 111111 11246999
Q ss_pred EEeCCCC
Q 045248 136 VIHCATG 142 (240)
Q Consensus 136 v~d~~g~ 142 (240)
++.+.|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9999883
No 227
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.50 E-value=0.015 Score=46.22 Aligned_cols=76 Identities=22% Similarity=0.270 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHH----HHHhcCCCE-EE----eCCCCc--ccccc--CCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIE----FVKSLGADE-VL----DYKTPD--GAALK--SPSGR 131 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~----~~~~~g~~~-v~----~~~~~~--~~~~~--~~~~~ 131 (240)
.++.|+|+||++|+|.+++.-....|++++.+++. ++++ .+++.++.. ++ |-.+.+ ...++ ...-+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 78999999999999999988888999988888853 5544 445555433 32 222222 11111 12346
Q ss_pred cccEEEeCCC
Q 045248 132 KYDAVIHCAT 141 (240)
Q Consensus 132 ~~d~v~d~~g 141 (240)
++|+.++..|
T Consensus 91 ~vDvLVNNAG 100 (282)
T KOG1205|consen 91 RVDVLVNNAG 100 (282)
T ss_pred CCCEEEecCc
Confidence 7999999998
No 228
>PLN02253 xanthoxin dehydrogenase
Probab=96.49 E-value=0.0097 Score=47.44 Aligned_cols=35 Identities=26% Similarity=0.203 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+||+|++|.++++.+...|++|+.+.+.
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 57899999999999999998888899999998864
No 229
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.0092 Score=48.32 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+||+|++|..+++.+...|++|+.++++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999888889999988864
No 230
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.012 Score=46.04 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+|++|++|..+++.+...|++|+.+.++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 56889999999999999999888899999999875
No 231
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.47 E-value=0.014 Score=49.10 Aligned_cols=76 Identities=22% Similarity=0.224 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH-HHhcCC-CEEEeCCCCccccccCCCCCcccEEEeCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF-VKSLGA-DEVLDYKTPDGAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~-~~~~g~-~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 142 (240)
.+++++|.||+|++|.++++.+...|++|+++++. ++.+. ..+.+. ...+..+-.+...+.... +++|+++.+.|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l-~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELL-EKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHh-CCCCEEEECCCc
Confidence 57899999999999999999888899999998864 33322 111111 122222111211111111 369999998874
No 232
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.47 E-value=0.011 Score=46.54 Aligned_cols=34 Identities=9% Similarity=0.027 Sum_probs=30.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
++++||+|++|++|..+++.+...|++|+.+.++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~ 35 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADIN 35 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4689999999999999999998899999998864
No 233
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.0088 Score=47.55 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
+++++||.|++|++|..+++.+...|++|+.+.++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 57899999999999999999999999999999864
No 234
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.0087 Score=47.03 Aligned_cols=77 Identities=17% Similarity=0.186 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH---hcCCC-EEE--eCCCCc--cccccC--CCCCccc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK---SLGAD-EVL--DYKTPD--GAALKS--PSGRKYD 134 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~---~~g~~-~v~--~~~~~~--~~~~~~--~~~~~~d 134 (240)
.++++||+||+|++|..+++.+...|++|+.+.++ ++.+..+ +.+.. ..+ |..+.. ...+.. ....++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 67899999999999999998888899998888864 3333333 33432 222 222211 111111 0114789
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
+++.++|.
T Consensus 86 ~vi~~ag~ 93 (258)
T PRK08628 86 GLVNNAGV 93 (258)
T ss_pred EEEECCcc
Confidence 99999983
No 235
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.46 E-value=0.011 Score=46.55 Aligned_cols=74 Identities=26% Similarity=0.245 Sum_probs=46.3
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCCEEEeC--CCCc--cccccC--CCCCcccEEE
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGADEVLDY--KTPD--GAALKS--PSGRKYDAVI 137 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~~v~~~--~~~~--~~~~~~--~~~~~~d~v~ 137 (240)
++||+|+++++|..+++.+...|++|+.+.++ ++.+.+ ++.+....+.. .+.. ...++. ....++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 68999999999999999999999999998865 333222 22332223322 2211 111111 1124699999
Q ss_pred eCCCC
Q 045248 138 HCATG 142 (240)
Q Consensus 138 d~~g~ 142 (240)
.+.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99884
No 236
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.46 E-value=0.016 Score=46.15 Aligned_cols=77 Identities=19% Similarity=0.158 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCc--hHHHHHHHHHHhCCCEEEEEeCcc-cH---HHH-HhcCCCEEE--eCCCCc--cccccC--CCCCc
Q 045248 66 QQKNILVTAASG--GVGHYAVQLAKLGNTHVTASCGAR-NI---EFV-KSLGADEVL--DYKTPD--GAALKS--PSGRK 132 (240)
Q Consensus 66 ~g~~vlV~G~~g--~vG~~~~~~a~~~g~~v~~~~~~~-~~---~~~-~~~g~~~v~--~~~~~~--~~~~~~--~~~~~ 132 (240)
+++++||+||++ ++|.++++.+...|++|+.+.+++ .. +.+ ++.|....+ |-.+.. ...++. ..-++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 578999999876 999999999999999998887542 12 222 344543223 222221 111111 11247
Q ss_pred ccEEEeCCCC
Q 045248 133 YDAVIHCATG 142 (240)
Q Consensus 133 ~d~v~d~~g~ 142 (240)
+|++++++|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999999983
No 237
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.012 Score=45.75 Aligned_cols=78 Identities=18% Similarity=0.213 Sum_probs=49.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCC-EEE--eCCCCc--cccccCC--CCCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGAD-EVL--DYKTPD--GAALKSP--SGRK 132 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~-~v~--~~~~~~--~~~~~~~--~~~~ 132 (240)
...++++|.|++|++|..++..+...|++|+++.++ ++.+.+ ++.+.. ..+ |..+.+ ...++.. ...+
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 456789999999999999999999999999999975 333332 222322 122 222221 1111110 1235
Q ss_pred ccEEEeCCCC
Q 045248 133 YDAVIHCATG 142 (240)
Q Consensus 133 ~d~v~d~~g~ 142 (240)
+|+++.+.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 238
>PRK08264 short chain dehydrogenase; Validated
Probab=96.44 E-value=0.0097 Score=46.13 Aligned_cols=72 Identities=25% Similarity=0.269 Sum_probs=47.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHHHhcCCC-EEE--eCCCCc-cc-cccCCCCCcccEEEe
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFVKSLGAD-EVL--DYKTPD-GA-ALKSPSGRKYDAVIH 138 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~-~v~--~~~~~~-~~-~~~~~~~~~~d~v~d 138 (240)
.+++++|+||+|++|..+++.+...|+ +|+.+.++ ++.+. .+.. .++ |..+.+ .. ..+. -..+|++|.
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEA--ASDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHh--cCCCCEEEE
Confidence 568899999999999999999999999 99888875 33332 3322 222 222211 11 1121 135899999
Q ss_pred CCCC
Q 045248 139 CATG 142 (240)
Q Consensus 139 ~~g~ 142 (240)
++|.
T Consensus 80 ~ag~ 83 (238)
T PRK08264 80 NAGI 83 (238)
T ss_pred CCCc
Confidence 9985
No 239
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.44 E-value=0.012 Score=45.59 Aligned_cols=75 Identities=23% Similarity=0.227 Sum_probs=48.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-c-cHHHHHhcCCCEEE--eCCCCc--cccccCC--CCCcccEEEe
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-R-NIEFVKSLGADEVL--DYKTPD--GAALKSP--SGRKYDAVIH 138 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~-~~~~~~~~g~~~v~--~~~~~~--~~~~~~~--~~~~~d~v~d 138 (240)
++++||.|++|++|..+++.+...|++|+.+.++ + ..+.+++.|.. .+ |..+.+ ...+... ...++|+++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 4689999999999999999998999999998864 2 33444555532 22 222221 1111111 1246899999
Q ss_pred CCCC
Q 045248 139 CATG 142 (240)
Q Consensus 139 ~~g~ 142 (240)
+.|.
T Consensus 81 ~ag~ 84 (236)
T PRK06483 81 NASD 84 (236)
T ss_pred CCcc
Confidence 9873
No 240
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.011 Score=46.15 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
++++++|.|++|++|..+++.+...|++|+.+.++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~ 38 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRD 38 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC
Confidence 56899999999999999998888889999999865
No 241
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.41 E-value=0.018 Score=46.00 Aligned_cols=91 Identities=15% Similarity=0.127 Sum_probs=56.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHH-HhcCCCEE-EeCCCCccccccCCCCC-cccEEEeC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFV-KSLGADEV-LDYKTPDGAALKSPSGR-KYDAVIHC 139 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~~~~-~~d~v~d~ 139 (240)
.++++++|.| +||.+.+++.-++..|+ +++++.|+ +|.+.+ +.++.... +.... ....... .+|+++++
T Consensus 124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~-----~~~~~~~~~~dliINa 197 (283)
T COG0169 124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA-----LADLEGLEEADLLINA 197 (283)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc-----ccccccccccCEEEEC
Confidence 4689999999 89999999999999997 78888875 665555 34442111 10110 0001111 59999999
Q ss_pred CCCCC-------ccccccCCCCCcEEEEeC
Q 045248 140 ATGIP-------WSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 140 ~g~~~-------~~~~~~~l~~~G~iv~~g 162 (240)
++... ... ..++++.-.+..+-
T Consensus 198 Tp~Gm~~~~~~~~~~-~~~l~~~~~v~D~v 226 (283)
T COG0169 198 TPVGMAGPEGDSPVP-AELLPKGAIVYDVV 226 (283)
T ss_pred CCCCCCCCCCCCCCc-HHhcCcCCEEEEec
Confidence 96211 111 34566666665554
No 242
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.41 E-value=0.014 Score=46.28 Aligned_cols=76 Identities=12% Similarity=0.171 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cc----cHHHHHhcCCCEE--EeCCCCc-----cccccCCCCCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-AR----NIEFVKSLGADEV--LDYKTPD-----GAALKSPSGRK 132 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~----~~~~~~~~g~~~v--~~~~~~~-----~~~~~~~~~~~ 132 (240)
-.|+.|||+||++|+|.+.++=...+|++++..+- .+ ..++.++.|..+. .|-++.+ .+.+++.. +.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G~ 114 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV-GD 114 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence 46899999999999999988888888998777773 22 3445555562222 2323322 12233222 37
Q ss_pred ccEEEeCCC
Q 045248 133 YDAVIHCAT 141 (240)
Q Consensus 133 ~d~v~d~~g 141 (240)
+|++++.+|
T Consensus 115 V~ILVNNAG 123 (300)
T KOG1201|consen 115 VDILVNNAG 123 (300)
T ss_pred ceEEEeccc
Confidence 999999998
No 243
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.41 E-value=0.012 Score=45.91 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
+++++||+||+|++|..+++.+...|++|+.++++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 46889999999999999999999999999988864
No 244
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.41 E-value=0.04 Score=40.79 Aligned_cols=92 Identities=20% Similarity=0.275 Sum_probs=58.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHH----HhcCCCEE--EeCCCCccccccCCCCCcccEE
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFV----KSLGADEV--LDYKTPDGAALKSPSGRKYDAV 136 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~----~~~g~~~v--~~~~~~~~~~~~~~~~~~~d~v 136 (240)
.+++.++=+|+ |.|...++++..... +|++++++ ++.+.. +++|.+.+ +.-+.+ ..+... ..+|.+
T Consensus 33 ~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap--~~L~~~--~~~dai 106 (187)
T COG2242 33 RPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAP--EALPDL--PSPDAI 106 (187)
T ss_pred CCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccch--HhhcCC--CCCCEE
Confidence 78897777773 356777888854444 99999975 554444 57886633 222222 122111 258888
Q ss_pred EeCCCCC---CccccccCCCCCcEEEEeC
Q 045248 137 IHCATGI---PWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 137 ~d~~g~~---~~~~~~~~l~~~G~iv~~g 162 (240)
|=--|.. .++.++..|+++|++|.--
T Consensus 107 FIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 107 FIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred EECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 7554432 2888999999999988543
No 245
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.41 E-value=0.014 Score=45.90 Aligned_cols=77 Identities=17% Similarity=0.173 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHH----HHHhcCCCEE-E--eCCCCc--cccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIE----FVKSLGADEV-L--DYKTPD--GAALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~----~~~~~g~~~v-~--~~~~~~--~~~~~~--~~~~~~ 133 (240)
.++++||+|++|++|..+++.+...|++|+.+.++ ++.+ .+++.+.... + |..+.+ ...+.. ....++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999988864 3322 2234454322 2 212211 111111 112358
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.+.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999974
No 246
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.41 E-value=0.12 Score=37.57 Aligned_cols=98 Identities=19% Similarity=0.186 Sum_probs=58.5
Q ss_pred hhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEe
Q 045248 38 EGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLD 116 (240)
Q Consensus 38 ~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~ 116 (240)
+-..+|++....+..+ +..++. -.|++++|+|.+..+|.-+..++...|+.|....+. +..+..-
T Consensus 12 ~~~~~PcTp~aii~lL-~~~~~~----l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~--------- 77 (160)
T PF02882_consen 12 QPGFVPCTPLAIIELL-EYYGID----LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEIT--------- 77 (160)
T ss_dssp TTSS--HHHHHHHHHH-HHTT-S----TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH---------
T ss_pred CCCCcCCCHHHHHHHH-HhcCCC----CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccccee---------
Confidence 3355677776677777 555543 489999999988889999999999999998886643 3332211
Q ss_pred CCCCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 117 YKTPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 117 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
+..|+|+-++|.+.+- --+.++++..++.+|..
T Consensus 78 --------------~~ADIVVsa~G~~~~i-~~~~ik~gavVIDvG~~ 110 (160)
T PF02882_consen 78 --------------RRADIVVSAVGKPNLI-KADWIKPGAVVIDVGIN 110 (160)
T ss_dssp --------------TTSSEEEE-SSSTT-B--GGGS-TTEEEEE--CE
T ss_pred --------------eeccEEeeeecccccc-ccccccCCcEEEecCCc
Confidence 2367777777765532 23467787777777753
No 247
>PRK08643 acetoin reductase; Validated
Probab=96.41 E-value=0.013 Score=46.06 Aligned_cols=76 Identities=20% Similarity=0.135 Sum_probs=47.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCCE-EE--eCCCCc--cccccCC--CCCccc
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGADE-VL--DYKTPD--GAALKSP--SGRKYD 134 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~~-v~--~~~~~~--~~~~~~~--~~~~~d 134 (240)
+++++|+|++|++|..+++.+...|++|+.+.++ ++.+.+ ++.+... .+ |..+++ ...+... ...++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999864 333222 2233321 12 222221 1111111 124699
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999973
No 248
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.41 E-value=0.027 Score=42.17 Aligned_cols=94 Identities=20% Similarity=0.248 Sum_probs=57.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhC-CCEEEEEeCc-ccHHHH----HhcCCCEEEeCCCCccccccCCCCCcccEEEe
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLG-NTHVTASCGA-RNIEFV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVIH 138 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~-g~~v~~~~~~-~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d 138 (240)
+++.+||-+| + |.|..++.+++.. +++|++++.+ +..+.+ ++.+.+. +.....+...... ...||+|+-
T Consensus 44 ~~g~~VLDiG-c-GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~d~~~~~~--~~~fDlV~~ 118 (187)
T PRK00107 44 PGGERVLDVG-S-GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHGRAEEFGQ--EEKFDVVTS 118 (187)
T ss_pred CCCCeEEEEc-C-CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEeccHhhCCC--CCCccEEEE
Confidence 5688999988 3 3455555566544 5699999965 444444 3455433 2222222111211 457999986
Q ss_pred CCCC---CCccccccCCCCCcEEEEeCC
Q 045248 139 CATG---IPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 139 ~~g~---~~~~~~~~~l~~~G~iv~~g~ 163 (240)
.... ..+..+.+.|+++|+++.+-.
T Consensus 119 ~~~~~~~~~l~~~~~~LkpGG~lv~~~~ 146 (187)
T PRK00107 119 RAVASLSDLVELCLPLLKPGGRFLALKG 146 (187)
T ss_pred ccccCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 5432 226678889999999887743
No 249
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.41 E-value=0.012 Score=46.81 Aligned_cols=35 Identities=14% Similarity=0.103 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|.|++|++|..+++.+...|++|+.+.++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~ 43 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRN 43 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999999999988864
No 250
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.40 E-value=0.011 Score=46.35 Aligned_cols=77 Identities=19% Similarity=0.109 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc---cHHHHHhcCCC-EEEeCCCCcc----ccccC--CCCCcccE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR---NIEFVKSLGAD-EVLDYKTPDG----AALKS--PSGRKYDA 135 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~---~~~~~~~~g~~-~v~~~~~~~~----~~~~~--~~~~~~d~ 135 (240)
.+++++|+|++|++|.++++.+...|++|+.+.+.+ ..+.+++.+.. ..+..+-.+. ..++. ....++|+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 578999999999999999999999999998876432 22333444432 1222221111 11111 11246999
Q ss_pred EEeCCCC
Q 045248 136 VIHCATG 142 (240)
Q Consensus 136 v~d~~g~ 142 (240)
++.++|.
T Consensus 89 li~~Ag~ 95 (253)
T PRK08993 89 LVNNAGL 95 (253)
T ss_pred EEECCCC
Confidence 9999984
No 251
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.40 E-value=0.012 Score=46.17 Aligned_cols=77 Identities=14% Similarity=0.145 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc--ccHHHHHhcCCCEE-EeCCCCc--cccccC--CCCCcccEEEe
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA--RNIEFVKSLGADEV-LDYKTPD--GAALKS--PSGRKYDAVIH 138 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~--~~~~~~~~~g~~~v-~~~~~~~--~~~~~~--~~~~~~d~v~d 138 (240)
.+++++|+|++|++|..+++.+...|++|+.+.+. +..+.+++.+...+ .|..++. ...+.. ....++|+++.
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57899999999999999999999999998877643 33344443333211 1222222 111111 11246899999
Q ss_pred CCCC
Q 045248 139 CATG 142 (240)
Q Consensus 139 ~~g~ 142 (240)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06463 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9974
No 252
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.40 E-value=0.0065 Score=43.71 Aligned_cols=91 Identities=19% Similarity=0.317 Sum_probs=60.6
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHHHHhcCCCEEEeCCCCcc-----ccccC--CCCCcccEEEeCCCC
Q 045248 70 ILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDG-----AALKS--PSGRKYDAVIHCATG 142 (240)
Q Consensus 70 vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~-----~~~~~--~~~~~~d~v~d~~g~ 142 (240)
|+|+| +|++|......++..|.+|..+.++.+.+..++.|.. +...+.+. ..... .....+|++|=|+-.
T Consensus 1 I~I~G-~GaiG~~~a~~L~~~g~~V~l~~r~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa 77 (151)
T PF02558_consen 1 ILIIG-AGAIGSLYAARLAQAGHDVTLVSRSPRLEAIKEQGLT--ITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKA 77 (151)
T ss_dssp EEEES-TSHHHHHHHHHHHHTTCEEEEEESHHHHHHHHHHCEE--EEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSG
T ss_pred CEEEC-cCHHHHHHHHHHHHCCCceEEEEccccHHhhhheeEE--EEecccceecccccccCcchhccCCCcEEEEEecc
Confidence 68999 9999999888888899999999986677777777743 22222110 01111 235679999999965
Q ss_pred CC----ccccccCCCCCcEEEEeCC
Q 045248 143 IP----WSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 143 ~~----~~~~~~~l~~~G~iv~~g~ 163 (240)
.. ++.+...+.++..++.+-.
T Consensus 78 ~~~~~~l~~l~~~~~~~t~iv~~qN 102 (151)
T PF02558_consen 78 YQLEQALQSLKPYLDPNTTIVSLQN 102 (151)
T ss_dssp GGHHHHHHHHCTGEETTEEEEEESS
T ss_pred cchHHHHHHHhhccCCCcEEEEEeC
Confidence 33 4445556667777877754
No 253
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.011 Score=47.10 Aligned_cols=76 Identities=13% Similarity=0.090 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCC-EEE--eCCCCc-c-ccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGAD-EVL--DYKTPD-G-AALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~-~v~--~~~~~~-~-~~~~~--~~~~~~ 133 (240)
.+++++|+|++|++|..+++.+...|++|+.+.++ ++.+.+ +..|.. ..+ |..+.+ . ..+.. ....++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999888854 333322 233432 122 222211 1 11111 012468
Q ss_pred cEEEeCCC
Q 045248 134 DAVIHCAT 141 (240)
Q Consensus 134 d~v~d~~g 141 (240)
|+++.+.|
T Consensus 85 d~li~nAg 92 (275)
T PRK05876 85 DVVFSNAG 92 (275)
T ss_pred CEEEECCC
Confidence 99999998
No 254
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.014 Score=46.57 Aligned_cols=35 Identities=26% Similarity=0.191 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.++++||+||+|++|..++..+...|++|++++++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~ 36 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRN 36 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCC
Confidence 35789999999999999999888899999999864
No 255
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.022 Score=44.08 Aligned_cols=76 Identities=12% Similarity=0.033 Sum_probs=49.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH----HHhcCCCE-EE--eCCCCc-c-cccc---CCCCCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF----VKSLGADE-VL--DYKTPD-G-AALK---SPSGRK 132 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~----~~~~g~~~-v~--~~~~~~-~-~~~~---~~~~~~ 132 (240)
.+++++|.|+++++|.+.+.-+...|++|+.+.++ ++.+. +++.+... .+ |..+.. . ..+. ...+..
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999998888899999988864 44332 23445332 22 222221 1 1111 112236
Q ss_pred ccEEEeCCC
Q 045248 133 YDAVIHCAT 141 (240)
Q Consensus 133 ~d~v~d~~g 141 (240)
+|+++.+.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999997
No 256
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.015 Score=45.74 Aligned_cols=75 Identities=23% Similarity=0.345 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----Hh-cCCC-EEE--eCCCCc-c-ccccCCCCCccc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KS-LGAD-EVL--DYKTPD-G-AALKSPSGRKYD 134 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~-~g~~-~v~--~~~~~~-~-~~~~~~~~~~~d 134 (240)
.+++++|.|++|++|..+++.+...|++|+.+.++ ++.+.+ ++ .+.. ..+ |..+.. . ..++. -.++|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--~g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE--AGDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH--hCCCC
Confidence 57899999999999999999888899999999864 443332 22 2321 222 222211 1 11121 14699
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
+++.+.|.
T Consensus 84 ~lv~~ag~ 91 (259)
T PRK06125 84 ILVNNAGA 91 (259)
T ss_pred EEEECCCC
Confidence 99999873
No 257
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.37 E-value=0.097 Score=38.46 Aligned_cols=56 Identities=18% Similarity=0.091 Sum_probs=40.6
Q ss_pred hhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCch-HHHHHHHHHHhCCCEEEEEeCc
Q 045248 39 GSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGG-VGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 39 aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~-vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
....|+...++...+.+...- -.+++++|+| +|. +|..++..++..|++|..+.+.
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~-----l~gk~vlViG-~G~~~G~~~a~~L~~~g~~V~v~~r~ 77 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGID-----LAGKKVVVVG-RSNIVGKPLAALLLNRNATVTVCHSK 77 (168)
T ss_pred CCccCChHHHHHHHHHHcCCC-----CCCCEEEEEC-CcHHHHHHHHHHHhhCCCEEEEEECC
Confidence 344566655666666444322 3899999999 676 5999999999999987777754
No 258
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.37 E-value=0.0065 Score=46.64 Aligned_cols=94 Identities=18% Similarity=0.172 Sum_probs=59.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEe-CcccHHHHHhcCCCE--EEeCCCCccccccCCCCCcccEEEe----
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASC-GARNIEFVKSLGADE--VLDYKTPDGAALKSPSGRKYDAVIH---- 138 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~d~v~d---- 138 (240)
+|.+||=+|.+| |+ +.+-+...|++|++++ +++..+.++.-.... -++|.......+.. .++.||+|+.
T Consensus 59 ~g~~vLDvGCGg--G~-Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~-~~~~FDvV~cmEVl 134 (243)
T COG2227 59 PGLRVLDVGCGG--GI-LSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLAS-AGGQFDVVTCMEVL 134 (243)
T ss_pred CCCeEEEecCCc--cH-hhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchhhhHHHHHh-cCCCccEEEEhhHH
Confidence 788999888444 34 4445556789999999 456667775322211 14455433222222 2278999964
Q ss_pred -CCCCCC--ccccccCCCCCcEEEEeCC
Q 045248 139 -CATGIP--WSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 139 -~~g~~~--~~~~~~~l~~~G~iv~~g~ 163 (240)
-+..+. +..+.++++|+|.++....
T Consensus 135 EHv~dp~~~~~~c~~lvkP~G~lf~STi 162 (243)
T COG2227 135 EHVPDPESFLRACAKLVKPGGILFLSTI 162 (243)
T ss_pred HccCCHHHHHHHHHHHcCCCcEEEEecc
Confidence 444432 6778999999999887653
No 259
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.014 Score=46.46 Aligned_cols=75 Identities=23% Similarity=0.238 Sum_probs=47.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHh-cCCC-EEE--eCCCCc--cccccC--CCCCcccEEEe
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKS-LGAD-EVL--DYKTPD--GAALKS--PSGRKYDAVIH 138 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~-~g~~-~v~--~~~~~~--~~~~~~--~~~~~~d~v~d 138 (240)
+++||+||+|++|..+++.+...|++|+++.++ ++.+.+++ .+.. .++ |..+.. ...+.. ....++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999888899999999875 45554433 2321 222 222221 111111 11246899999
Q ss_pred CCCC
Q 045248 139 CATG 142 (240)
Q Consensus 139 ~~g~ 142 (240)
++|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9984
No 260
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.34 E-value=0.022 Score=44.91 Aligned_cols=77 Identities=13% Similarity=0.064 Sum_probs=47.7
Q ss_pred CCCeEEEEcCC--chHHHHHHHHHHhCCCEEEEEeCcc-cH---HHH-HhcCCCEEEeCCCCcc----ccccCC--CCCc
Q 045248 66 QQKNILVTAAS--GGVGHYAVQLAKLGNTHVTASCGAR-NI---EFV-KSLGADEVLDYKTPDG----AALKSP--SGRK 132 (240)
Q Consensus 66 ~g~~vlV~G~~--g~vG~~~~~~a~~~g~~v~~~~~~~-~~---~~~-~~~g~~~v~~~~~~~~----~~~~~~--~~~~ 132 (240)
.+++++|+||+ +++|.++++.+...|++|+.+.+.+ .. +.+ ++++....+..+-.+. ..++.. ..++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 67899999987 4999999998889999998887642 22 222 3344333332221111 111111 1246
Q ss_pred ccEEEeCCCC
Q 045248 133 YDAVIHCATG 142 (240)
Q Consensus 133 ~d~v~d~~g~ 142 (240)
+|+++.++|.
T Consensus 89 ld~lv~nAg~ 98 (258)
T PRK07533 89 LDFLLHSIAF 98 (258)
T ss_pred CCEEEEcCcc
Confidence 9999999873
No 261
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=96.31 E-value=0.013 Score=48.18 Aligned_cols=37 Identities=19% Similarity=0.201 Sum_probs=32.7
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 64 SGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 64 ~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
+.++++|||+||+|.+|..+++.+...|.+|+++.+.
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~ 39 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRR 39 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecc
Confidence 3467899999999999999999999999999998753
No 262
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.0064 Score=48.16 Aligned_cols=75 Identities=21% Similarity=0.231 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCE-EEeCCCCc--cccccC--CCCCcccEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADE-VLDYKTPD--GAALKS--PSGRKYDAVIHC 139 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~-v~~~~~~~--~~~~~~--~~~~~~d~v~d~ 139 (240)
.+++++|+||+|++|..+++.+...|++|++++++ ++.+.. .+... ..|..+.. ...++. ...+++|++|.+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 45789999999999999999888899999999875 332211 12221 12333222 111111 112468999999
Q ss_pred CCC
Q 045248 140 ATG 142 (240)
Q Consensus 140 ~g~ 142 (240)
.|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 984
No 263
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.30 E-value=0.082 Score=42.29 Aligned_cols=92 Identities=16% Similarity=0.088 Sum_probs=56.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHH-HhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 142 (240)
.+++++|+| +|++|.+++..+...|+ +|+++.++ ++.+.+ ++++....+.. ..+. ...-..+|+|++++..
T Consensus 122 ~~k~vlVlG-aGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~----~~~~~~~DivInaTp~ 195 (278)
T PRK00258 122 KGKRILILG-AGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLEL----QEELADFDLIINATSA 195 (278)
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccc----hhccccCCEEEECCcC
Confidence 678999999 79999999999999995 88888875 554444 34432110111 0000 0111468999999974
Q ss_pred CCc------cccccCCCCCcEEEEeCC
Q 045248 143 IPW------STFEPNLGTNGKVIDITP 163 (240)
Q Consensus 143 ~~~------~~~~~~l~~~G~iv~~g~ 163 (240)
... ......++++..++.+-.
T Consensus 196 g~~~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 196 GMSGELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence 221 122345677766666643
No 264
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.29 E-value=0.019 Score=45.74 Aligned_cols=77 Identities=16% Similarity=0.148 Sum_probs=55.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-----HhcCC---CEEEeCCCCc--c-ccccCCCCCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-----KSLGA---DEVLDYKTPD--G-AALKSPSGRK 132 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-----~~~g~---~~v~~~~~~~--~-~~~~~~~~~~ 132 (240)
+-|++.+|.||+.|+|.+.+.=+..+|.+|+.+.|+ ++++.. ++.++ ..++|+.+.+ . ...+.+.+-.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 457899999999999988654444499999999986 676544 33442 2446777665 2 2345566677
Q ss_pred ccEEEeCCC
Q 045248 133 YDAVIHCAT 141 (240)
Q Consensus 133 ~d~v~d~~g 141 (240)
+-+.++++|
T Consensus 127 VgILVNNvG 135 (312)
T KOG1014|consen 127 VGILVNNVG 135 (312)
T ss_pred eEEEEeccc
Confidence 888899998
No 265
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.29 E-value=0.021 Score=47.16 Aligned_cols=35 Identities=23% Similarity=0.116 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++|||+||+|.+|..+++.+...|.+|+++.+.
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~ 37 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLD 37 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCC
Confidence 56899999999999999999999999999988854
No 266
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.016 Score=46.03 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+||+|++|..+++.+...|++|+.+.++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKT 39 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 56799999999999999999888999999998864
No 267
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.012 Score=45.42 Aligned_cols=72 Identities=19% Similarity=0.273 Sum_probs=46.1
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcCCCEE-EeCCCCc--cccccCCCCCcccEEEeCCC
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLGADEV-LDYKTPD--GAALKSPSGRKYDAVIHCAT 141 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~v-~~~~~~~--~~~~~~~~~~~~d~v~d~~g 141 (240)
+++|.||+|++|..+++.+...|++|+.+.++ ++.+.+ ++.+...+ .|..+.. ...++... .++|+++.+.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence 58999999999999999998899999998865 444433 34443322 1222221 11111111 25899999876
No 268
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.27 E-value=0.018 Score=45.14 Aligned_cols=76 Identities=18% Similarity=0.186 Sum_probs=47.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCC-CEEE--eCCCCccccccCCCCCcccEEEeCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGA-DEVL--DYKTPDGAALKSPSGRKYDAVIHCAT 141 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~-~~v~--~~~~~~~~~~~~~~~~~~d~v~d~~g 141 (240)
++++|||+||+|.+|..+++.+...|++|+++.+. ++.+.....+. ..++ |..+......... +.++|+||.+.|
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~-~~~~d~vi~~~g 94 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAI-GDDSDAVICATG 94 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHh-hcCCCEEEECCC
Confidence 56899999999999999998888889999988865 44332211111 1222 3222111111111 236999998887
Q ss_pred C
Q 045248 142 G 142 (240)
Q Consensus 142 ~ 142 (240)
.
T Consensus 95 ~ 95 (251)
T PLN00141 95 F 95 (251)
T ss_pred C
Confidence 4
No 269
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=96.26 E-value=0.015 Score=48.21 Aligned_cols=94 Identities=13% Similarity=0.146 Sum_probs=64.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHhC--CCEEEEEe-C-c-c-cHHHHHhcCCCEEEeCCCCcccc-----------------
Q 045248 68 KNILVTAASGGVGHYAVQLAKLG--NTHVTASC-G-A-R-NIEFVKSLGADEVLDYKTPDGAA----------------- 124 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~--g~~v~~~~-~-~-~-~~~~~~~~g~~~v~~~~~~~~~~----------------- 124 (240)
++|.|.|++|++|...++..+.+ .++|++++ . + + -.+.++++++..+.-.++.....
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 57999999999999999988765 46888888 3 2 2 34566788887665443321110
Q ss_pred --ccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEEEe
Q 045248 125 --LKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 125 --~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~ 161 (240)
.+......+|+|+.++++. .+...+.+++.|=++.+.
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 0112234699999999874 477788888877666654
No 270
>PRK06484 short chain dehydrogenase; Validated
Probab=96.26 E-value=0.017 Score=50.51 Aligned_cols=78 Identities=12% Similarity=0.156 Sum_probs=51.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-hcCCCE-EE--eCCCCc--cccccCC--CCCcccE
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-SLGADE-VL--DYKTPD--GAALKSP--SGRKYDA 135 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~-v~--~~~~~~--~~~~~~~--~~~~~d~ 135 (240)
..++++||+||++++|..+++.+...|++|+.+.++ ++.+.+. +++... .+ |..+.+ ...++.. ....+|+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 357899999999999999999999999999999875 5554443 444322 12 322222 1111111 1246999
Q ss_pred EEeCCCC
Q 045248 136 VIHCATG 142 (240)
Q Consensus 136 v~d~~g~ 142 (240)
+|.++|.
T Consensus 347 li~nAg~ 353 (520)
T PRK06484 347 LVNNAGI 353 (520)
T ss_pred EEECCCC
Confidence 9999883
No 271
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.015 Score=46.23 Aligned_cols=76 Identities=22% Similarity=0.185 Sum_probs=47.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-hcCCC-EEE--eCCCCc-c-ccccC--CCCCcccEEE
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-SLGAD-EVL--DYKTPD-G-AALKS--PSGRKYDAVI 137 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~-~v~--~~~~~~-~-~~~~~--~~~~~~d~v~ 137 (240)
++++||+|++|++|..+++.+...|++|+.+.++ ++.+.+. .++.. ..+ |..+.. . ..+.. ..-.++|+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999998888889999998875 4444433 33321 222 222211 1 11111 0124689999
Q ss_pred eCCCC
Q 045248 138 HCATG 142 (240)
Q Consensus 138 d~~g~ 142 (240)
.+.|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99984
No 272
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.25 E-value=0.0034 Score=53.77 Aligned_cols=87 Identities=15% Similarity=0.024 Sum_probs=54.1
Q ss_pred CCCCeEE----EEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCC-EEEeCCCCc-cccccCCCCCcccEEE
Q 045248 65 GQQKNIL----VTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGAD-EVLDYKTPD-GAALKSPSGRKYDAVI 137 (240)
Q Consensus 65 ~~g~~vl----V~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~-~v~~~~~~~-~~~~~~~~~~~~d~v~ 137 (240)
++|+++| |+||+|++|.+++|+++..|++|+++.++ .+....+..+.. .+++.+... ...+...
T Consensus 32 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~--------- 102 (450)
T PRK08261 32 RPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKAL--------- 102 (450)
T ss_pred CCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHH---------
Confidence 7888888 88889999999999999999999998754 322222222322 233322211 0000000
Q ss_pred eCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 138 HCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 138 d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
...+...++.+.++|+++.++..
T Consensus 103 ----~~~~~~~l~~l~~~griv~i~s~ 125 (450)
T PRK08261 103 ----YEFFHPVLRSLAPCGRVVVLGRP 125 (450)
T ss_pred ----HHHHHHHHHhccCCCEEEEEccc
Confidence 01244567788889999988753
No 273
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.25 E-value=0.077 Score=40.62 Aligned_cols=98 Identities=20% Similarity=0.180 Sum_probs=59.8
Q ss_pred hhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC--CEEEEEeCc-ccHHHH----HhcCCCEEEeCCCCccccccC
Q 045248 55 QSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN--THVTASCGA-RNIEFV----KSLGADEVLDYKTPDGAALKS 127 (240)
Q Consensus 55 ~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g--~~v~~~~~~-~~~~~~----~~~g~~~v~~~~~~~~~~~~~ 127 (240)
+...+ +++++||-+| +|.|..+..+++..+ .+|++++.+ +-.+.+ ++.|...+ .....+... ..
T Consensus 70 ~~l~~-----~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v-~~~~gd~~~-~~ 140 (212)
T PRK13942 70 ELLDL-----KEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNV-EVIVGDGTL-GY 140 (212)
T ss_pred HHcCC-----CCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEECCccc-CC
Confidence 55666 7999999998 345667777777665 489999964 444444 34454321 111111000 01
Q ss_pred CCCCcccEEEeCCCC-CCccccccCCCCCcEEEEe
Q 045248 128 PSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 128 ~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~ 161 (240)
.....||.|+-+... .......+.|+++|+++..
T Consensus 141 ~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 141 EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 123579999755443 3356778899999998764
No 274
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.012 Score=46.36 Aligned_cols=77 Identities=19% Similarity=0.214 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCE-EEEEeCc-ccHH----HHHhcCCCEE-E--eCCCCc--cccccCC--CCCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTH-VTASCGA-RNIE----FVKSLGADEV-L--DYKTPD--GAALKSP--SGRK 132 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~-v~~~~~~-~~~~----~~~~~g~~~v-~--~~~~~~--~~~~~~~--~~~~ 132 (240)
.+++++|+|++|++|..+++.+...|++ |+.+.++ ++.+ .+++.+.... + |..+.+ ...++.. .-.+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5688999999999999999999999997 8888864 3332 2334443321 2 333222 1111111 1136
Q ss_pred ccEEEeCCCC
Q 045248 133 YDAVIHCATG 142 (240)
Q Consensus 133 ~d~v~d~~g~ 142 (240)
+|.++.+.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999984
No 275
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.25 E-value=0.02 Score=44.37 Aligned_cols=77 Identities=21% Similarity=0.206 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH----HHhcCCCEEE---eCCCCc--cccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF----VKSLGADEVL---DYKTPD--GAALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~----~~~~g~~~v~---~~~~~~--~~~~~~--~~~~~~ 133 (240)
+++++||+|++|++|..+++.+...|.+|+.+.++ ++.+. ++..+....+ |..+.. ...+.. ..-.++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999988999999888875 44322 2334433222 222221 111111 112458
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|.++.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999974
No 276
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.23 E-value=0.16 Score=39.87 Aligned_cols=92 Identities=15% Similarity=0.087 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHHHhcCC-CEEEeCCCCccccccCCCCCcccEEEeCCC-
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGA-DEVLDYKTPDGAALKSPSGRKYDAVIHCAT- 141 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g- 141 (240)
.++.+||-+| +|. |..+..+++ .|.+|++++. ++..+.+++... ...+..+.. .. ......||+|+....
T Consensus 41 ~~~~~vLDiG-cG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~---~~-~~~~~~fD~V~s~~~l 113 (251)
T PRK10258 41 RKFTHVLDAG-CGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIE---SL-PLATATFDLAWSNLAV 113 (251)
T ss_pred cCCCeEEEee-CCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcc---cC-cCCCCcEEEEEECchh
Confidence 4678899998 554 655555544 6789999995 466677765432 122211111 11 112346999986553
Q ss_pred ----C--CCccccccCCCCCcEEEEeCC
Q 045248 142 ----G--IPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 142 ----~--~~~~~~~~~l~~~G~iv~~g~ 163 (240)
. ..+..+.+.|+++|.++....
T Consensus 114 ~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 114 QWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred hhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 1 126677889999999887654
No 277
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.23 E-value=0.01 Score=46.61 Aligned_cols=76 Identities=16% Similarity=0.176 Sum_probs=47.6
Q ss_pred CCCeEEEEcCC--chHHHHHHHHHHhCCCEEEEEeCccc-HHHHHhcCCC--EEE--eCCCCc--cccccCC--CCCccc
Q 045248 66 QQKNILVTAAS--GGVGHYAVQLAKLGNTHVTASCGARN-IEFVKSLGAD--EVL--DYKTPD--GAALKSP--SGRKYD 134 (240)
Q Consensus 66 ~g~~vlV~G~~--g~vG~~~~~~a~~~g~~v~~~~~~~~-~~~~~~~g~~--~v~--~~~~~~--~~~~~~~--~~~~~d 134 (240)
.+++++|+||+ +++|.++++.+...|++|+.+.++++ .+.++++... ..+ |-.+.. ...++.. .-..+|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 67899999988 79999999988889999998886533 2333333221 122 222211 1111111 124699
Q ss_pred EEEeCCC
Q 045248 135 AVIHCAT 141 (240)
Q Consensus 135 ~v~d~~g 141 (240)
+++.++|
T Consensus 86 ~lv~nAg 92 (252)
T PRK06079 86 GIVHAIA 92 (252)
T ss_pred EEEEccc
Confidence 9999987
No 278
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.022 Score=45.32 Aligned_cols=35 Identities=20% Similarity=0.222 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
+.++++|+||+|++|..+++.+...|++|++++++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~ 43 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARR 43 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 55789999999999999999888899999888864
No 279
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.22 E-value=0.022 Score=46.43 Aligned_cols=36 Identities=25% Similarity=0.298 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
..++++||+||+|.+|..+++.+...|++|+++.++
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~ 38 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRD 38 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcC
Confidence 467899999999999999999999999999887754
No 280
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.016 Score=45.74 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+|++|++|..+++.+...|++|+.+.++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDIS 39 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 57899999999999999999999899999988875
No 281
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.20 E-value=0.094 Score=42.17 Aligned_cols=94 Identities=21% Similarity=0.151 Sum_probs=65.7
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEe-CcccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASC-GARNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~g~~~v~~~~~ 119 (240)
..||+....+..+ +..++. -.|++|+|+|.++.+|.-.+.++...|+.|++.. ++...+.+
T Consensus 137 ~~PcTp~ai~~ll-~~~~i~----~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~------------- 198 (296)
T PRK14188 137 LVPCTPLGCMMLL-RRVHGD----LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAV------------- 198 (296)
T ss_pred CcCCCHHHHHHHH-HHhCCC----CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHH-------------
Confidence 4577766666666 544443 3899999999999999999999999999998885 33322111
Q ss_pred CccccccCCCCCcccEEEeCCCCCC-ccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~ 164 (240)
. ...|+|+-++|.+. +... .+++|..++.+|..
T Consensus 199 -----~-----~~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin 232 (296)
T PRK14188 199 -----C-----RRADILVAAVGRPEMVKGD--WIKPGATVIDVGIN 232 (296)
T ss_pred -----H-----hcCCEEEEecCChhhcchh--eecCCCEEEEcCCc
Confidence 0 23678888888654 3332 37888888888853
No 282
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.017 Score=45.38 Aligned_cols=76 Identities=22% Similarity=0.216 Sum_probs=47.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcCC--CEEE--eCCCCc-c-ccccC--CCCCcccEE
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLGA--DEVL--DYKTPD-G-AALKS--PSGRKYDAV 136 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~--~~v~--~~~~~~-~-~~~~~--~~~~~~d~v 136 (240)
+++++|+|++|++|..++..+...|++|+.+.++ ++.+.+ +++.. ...+ |..+.. . ..+.. ..-.++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4689999999999999998888899999998864 443333 33321 1222 222221 1 11111 011368999
Q ss_pred EeCCCC
Q 045248 137 IHCATG 142 (240)
Q Consensus 137 ~d~~g~ 142 (240)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999984
No 283
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.19 E-value=0.015 Score=52.47 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.++++||+|++|++|..+++.+...|++|+.++++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~ 447 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN 447 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57899999999999999999888899999999864
No 284
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.18 E-value=0.03 Score=44.63 Aligned_cols=77 Identities=17% Similarity=0.193 Sum_probs=48.8
Q ss_pred CCCeEEEEcCC--chHHHHHHHHHHhCCCEEEEEeCcc----cHHHH-HhcCCCEEE--eCCCCc--cccccC--CCCCc
Q 045248 66 QQKNILVTAAS--GGVGHYAVQLAKLGNTHVTASCGAR----NIEFV-KSLGADEVL--DYKTPD--GAALKS--PSGRK 132 (240)
Q Consensus 66 ~g~~vlV~G~~--g~vG~~~~~~a~~~g~~v~~~~~~~----~~~~~-~~~g~~~v~--~~~~~~--~~~~~~--~~~~~ 132 (240)
.+++++|+||+ +++|.++++.+...|++|+.+.+++ +.+.+ ++++....+ |-.+.+ ...++. ....+
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57899999986 7999999999889999999887642 22222 344533233 222222 111111 11246
Q ss_pred ccEEEeCCCC
Q 045248 133 YDAVIHCATG 142 (240)
Q Consensus 133 ~d~v~d~~g~ 142 (240)
+|+++.+.|.
T Consensus 84 iDilVnnAG~ 93 (274)
T PRK08415 84 IDFIVHSVAF 93 (274)
T ss_pred CCEEEECCcc
Confidence 9999999983
No 285
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.026 Score=43.91 Aligned_cols=32 Identities=19% Similarity=0.156 Sum_probs=29.1
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
++||.|++|++|..+++.+...|++|+.++++
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~ 34 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARS 34 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecC
Confidence 68999999999999999888899999998865
No 286
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.17 E-value=0.021 Score=44.77 Aligned_cols=35 Identities=23% Similarity=0.155 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.++++||+|++|++|..+++.+...|++|+.+.+.
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~ 37 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLN 37 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 46899999999999999999888899999999864
No 287
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.17 E-value=0.021 Score=43.27 Aligned_cols=66 Identities=17% Similarity=0.143 Sum_probs=45.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcCCCEEEeCCCCccccccCCCCCcccEEEeCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCAT 141 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g 141 (240)
.|++++|+| .|.+|..+++.+...|++|++++++ ++.+.+ +.+|+. .++..+ .....+|+++-|..
T Consensus 27 ~gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~--------l~~~~~Dv~vp~A~ 94 (200)
T cd01075 27 EGKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPEE--------IYSVDADVFAPCAL 94 (200)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcchh--------hccccCCEEEeccc
Confidence 788999999 8999999999999999999988764 454444 444643 333211 11124777775554
No 288
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.17 E-value=0.033 Score=42.64 Aligned_cols=95 Identities=18% Similarity=0.146 Sum_probs=63.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCC--CEEEEEeCc-ccHHHH----HhcCCCEEEeCCC-Cc-cccccCCCCCcccE
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGN--THVTASCGA-RNIEFV----KSLGADEVLDYKT-PD-GAALKSPSGRKYDA 135 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g--~~v~~~~~~-~~~~~~----~~~g~~~v~~~~~-~~-~~~~~~~~~~~~d~ 135 (240)
.+.+++|=+| ..+|..++.+|.... .+++++..+ ++.+.+ ++.|.+..+.--. .+ ...+.....+.||+
T Consensus 58 ~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~fDl 135 (219)
T COG4122 58 SGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDGSFDL 135 (219)
T ss_pred cCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCCCccE
Confidence 5778899888 567888999999777 388888865 666655 4677655322111 12 22222234578999
Q ss_pred EE-eCCCCCC---ccccccCCCCCcEEEEe
Q 045248 136 VI-HCATGIP---WSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 136 v~-d~~g~~~---~~~~~~~l~~~G~iv~~ 161 (240)
|| |+--..+ ++.++++|++||.++.=
T Consensus 136 iFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 136 VFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred EEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 95 4443333 88999999999998743
No 289
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.17 E-value=0.016 Score=45.51 Aligned_cols=77 Identities=16% Similarity=0.194 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHHH----HhcCCC-EEEe--CCCCc--cccccC--CCCCccc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFV----KSLGAD-EVLD--YKTPD--GAALKS--PSGRKYD 134 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~----~~~g~~-~v~~--~~~~~--~~~~~~--~~~~~~d 134 (240)
.++++||+||+|++|..+++.+...|++|+.+.++++.+.+ .+.+.. ..+. ..+.. ...+.. ....++|
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id 93 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKID 93 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 67899999999999999999999999999988865433322 233432 2222 22211 111111 1124689
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
+++.+.|.
T Consensus 94 ~li~~ag~ 101 (258)
T PRK06935 94 ILVNNAGT 101 (258)
T ss_pred EEEECCCC
Confidence 99999873
No 290
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.16 E-value=0.028 Score=45.83 Aligned_cols=36 Identities=33% Similarity=0.368 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
..+++|||+||+|.+|..+++.+...|++|+++.++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRD 38 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 357899999999999999999888899999988864
No 291
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.028 Score=44.13 Aligned_cols=35 Identities=17% Similarity=0.090 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+|+++++|..+++.+...|++|+.+.++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~ 41 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLR 41 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999999999988864
No 292
>PRK12743 oxidoreductase; Provisional
Probab=96.16 E-value=0.025 Score=44.40 Aligned_cols=76 Identities=22% Similarity=0.277 Sum_probs=47.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-c-ccH----HHHHhcCCC-EEE--eCCCCc-c-ccccC--CCCCcc
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-A-RNI----EFVKSLGAD-EVL--DYKTPD-G-AALKS--PSGRKY 133 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~-~~~----~~~~~~g~~-~v~--~~~~~~-~-~~~~~--~~~~~~ 133 (240)
++++||.||+|++|..+++.+...|++|+.+.+ + ++. +.++..|.. ..+ |..+.. . ..++. ..-.++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999988763 3 322 223345543 222 222211 1 11111 111368
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999999873
No 293
>PRK06720 hypothetical protein; Provisional
Probab=96.15 E-value=0.038 Score=40.71 Aligned_cols=77 Identities=16% Similarity=0.173 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHH----HHHhcCCCE-EEeCCCCccc----ccc--CCCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIE----FVKSLGADE-VLDYKTPDGA----ALK--SPSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~----~~~~~g~~~-v~~~~~~~~~----~~~--~~~~~~~ 133 (240)
+++.++|.||++++|...+..+...|++|+.+.++ ++.+ .+++.+... .+..+-.+.. .++ ....+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999998888899999988854 3332 222334332 2222211111 111 1122468
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.++|.
T Consensus 95 DilVnnAG~ 103 (169)
T PRK06720 95 DMLFQNAGL 103 (169)
T ss_pred CEEEECCCc
Confidence 999998874
No 294
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.15 E-value=0.023 Score=44.08 Aligned_cols=35 Identities=26% Similarity=0.266 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|.|++|++|..++..+...|++|+.+.++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~ 40 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLART 40 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999999888999999999875
No 295
>PRK05717 oxidoreductase; Validated
Probab=96.15 E-value=0.018 Score=45.25 Aligned_cols=77 Identities=19% Similarity=0.126 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccH-HHHHhcCCC-EEE--eCCCCc-c-ccccCC--CCCcccEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNI-EFVKSLGAD-EVL--DYKTPD-G-AALKSP--SGRKYDAV 136 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~-~~~~~~g~~-~v~--~~~~~~-~-~~~~~~--~~~~~d~v 136 (240)
.+++++|+|++|++|..+++.+...|++|+.+.++ ++. +..++++.. ..+ |..+.+ . ..++.. .-.++|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 67899999999999999999988899999988754 333 333444432 122 222211 1 111111 11358999
Q ss_pred EeCCCC
Q 045248 137 IHCATG 142 (240)
Q Consensus 137 ~d~~g~ 142 (240)
+.+.|.
T Consensus 89 i~~ag~ 94 (255)
T PRK05717 89 VCNAAI 94 (255)
T ss_pred EECCCc
Confidence 999984
No 296
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.12 E-value=0.037 Score=44.94 Aligned_cols=91 Identities=14% Similarity=0.172 Sum_probs=61.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCC--EEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNT--HVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~--~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 143 (240)
..+|.|+| +|.+|....+.++..|. +|++.+++ ++.+.+++.|.......+ . ...+ ...|+|+.|+...
T Consensus 6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~-~-~~~~-----~~aDvViiavp~~ 77 (307)
T PRK07502 6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTS-A-AEAV-----KGADLVILCVPVG 77 (307)
T ss_pred CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCC-H-HHHh-----cCCCEEEECCCHH
Confidence 46899999 99999999998888885 78888765 677777777753221111 0 1111 3589999999854
Q ss_pred C----ccccccCCCCCcEEEEeCCCc
Q 045248 144 P----WSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 144 ~----~~~~~~~l~~~G~iv~~g~~~ 165 (240)
. +......++++..++.++...
T Consensus 78 ~~~~v~~~l~~~l~~~~iv~dvgs~k 103 (307)
T PRK07502 78 ASGAVAAEIAPHLKPGAIVTDVGSVK 103 (307)
T ss_pred HHHHHHHHHHhhCCCCCEEEeCccch
Confidence 3 333344567777777776543
No 297
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.12 E-value=0.029 Score=43.66 Aligned_cols=77 Identities=27% Similarity=0.314 Sum_probs=47.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-c-c-cH---HHHHhcCCCEEE---eCCCCc--cccccC--CCCCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-A-R-NI---EFVKSLGADEVL---DYKTPD--GAALKS--PSGRK 132 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~-~-~~---~~~~~~g~~~v~---~~~~~~--~~~~~~--~~~~~ 132 (240)
.++.++|+|++|++|..+++.+...|++|+...+ . . .. +.+++.+..... |..+.. ...+.. ....+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3678999999999999999999999998887653 2 2 22 222334543221 222211 011110 01247
Q ss_pred ccEEEeCCCC
Q 045248 133 YDAVIHCATG 142 (240)
Q Consensus 133 ~d~v~d~~g~ 142 (240)
+|+++.+.|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 298
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.024 Score=44.21 Aligned_cols=38 Identities=21% Similarity=0.295 Sum_probs=31.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHH
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIE 104 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~ 104 (240)
+++++|+|++|++|..+++.+...|++|+.+.++ ++.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~ 40 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLE 40 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4689999999999999888888889999988864 4433
No 299
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.11 E-value=0.015 Score=44.32 Aligned_cols=97 Identities=19% Similarity=0.183 Sum_probs=58.5
Q ss_pred hhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC--EEEEEeCc-cc----HHHHHhcCCCEE-EeCCCCcccccc
Q 045248 55 QSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT--HVTASCGA-RN----IEFVKSLGADEV-LDYKTPDGAALK 126 (240)
Q Consensus 55 ~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~--~v~~~~~~-~~----~~~~~~~g~~~v-~~~~~~~~~~~~ 126 (240)
+...+ ++|++||-+| +|.|..+.-+++..|- +|+.+... +- .+.++++|.+.| +...+. .. -
T Consensus 66 ~~L~l-----~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg-~~--g 135 (209)
T PF01135_consen 66 EALDL-----KPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG-SE--G 135 (209)
T ss_dssp HHTTC------TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G-GG--T
T ss_pred HHHhc-----CCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch-hh--c
Confidence 66667 8999999998 3456666666666564 78888864 22 333456665432 111111 11 1
Q ss_pred CCCCCcccEEEeCCCCCC-ccccccCCCCCcEEEEe
Q 045248 127 SPSGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 127 ~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~ 161 (240)
.....+||.|+-+.+-+. -...++.|++||++|..
T Consensus 136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp TGGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred cccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 112357999998887544 45778899999998864
No 300
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.11 E-value=0.097 Score=41.79 Aligned_cols=95 Identities=20% Similarity=0.162 Sum_probs=66.8
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
..||+....+..+ +..++. -.|++++|+|.++-+|.-+..++...|+.|+.+.+. ..++.
T Consensus 137 ~~PcTp~aii~lL-~~~~i~----l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~-------------- 197 (285)
T PRK14189 137 FRPCTPYGVMKML-ESIGIP----LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAA-------------- 197 (285)
T ss_pred CcCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHH--------------
Confidence 4577766666666 555553 389999999977777999999999999998875432 22110
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
.. ...|+|+-++|.+.+-. -+.++++..++.+|..
T Consensus 198 ----~~-----~~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin 232 (285)
T PRK14189 198 ----HT-----RQADIVVAAVGKRNVLT-ADMVKPGATVIDVGMN 232 (285)
T ss_pred ----Hh-----hhCCEEEEcCCCcCccC-HHHcCCCCEEEEcccc
Confidence 00 34788888888655322 2778899888888854
No 301
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.11 E-value=0.016 Score=44.38 Aligned_cols=96 Identities=16% Similarity=0.011 Sum_probs=56.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHH-HhcCCCEEE------e-CCCCcc----ccccCC---
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFV-KSLGADEVL------D-YKTPDG----AALKSP--- 128 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~-~~~g~~~v~------~-~~~~~~----~~~~~~--- 128 (240)
.++.+||+.| .|.|.-++.+| .+|+.|++++- +...+.+ ++.+..... . +..... ..+...
T Consensus 33 ~~~~rvLd~G--CG~G~da~~LA-~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPL--CGKSLDLAWLA-EQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeC--CCchhHHHHHH-hCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 4678999998 44677777776 47999999994 4555543 333322110 0 000010 011111
Q ss_pred CCCcccEEEeCCCC---------CCccccccCCCCCcEEEEeCC
Q 045248 129 SGRKYDAVIHCATG---------IPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 129 ~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~iv~~g~ 163 (240)
....||.|+|+..- ..+..+.++|+|+|+++.++.
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 12469999997641 236678889999998666543
No 302
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.10 E-value=0.16 Score=40.75 Aligned_cols=69 Identities=13% Similarity=0.093 Sum_probs=44.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHH-HhcC----CCEEEeCCCCccccccCCCCCcccEEEe
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFV-KSLG----ADEVLDYKTPDGAALKSPSGRKYDAVIH 138 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~-~~~g----~~~v~~~~~~~~~~~~~~~~~~~d~v~d 138 (240)
.+++++|+| +|+.|.+++..+...|+ +|+.+.++ ++.+.+ ++++ ...+....+. .. .-..+|+||+
T Consensus 126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~-~~-----~~~~aDiVIn 198 (284)
T PRK12549 126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDL-AA-----ALAAADGLVH 198 (284)
T ss_pred cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccch-Hh-----hhCCCCEEEE
Confidence 568999999 89999999999999999 77777765 444433 3332 1122221110 00 1135899999
Q ss_pred CCC
Q 045248 139 CAT 141 (240)
Q Consensus 139 ~~g 141 (240)
|+.
T Consensus 199 aTp 201 (284)
T PRK12549 199 ATP 201 (284)
T ss_pred CCc
Confidence 964
No 303
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.08 E-value=0.024 Score=44.29 Aligned_cols=74 Identities=23% Similarity=0.256 Sum_probs=47.2
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-hcCCC-EEE--eCCCCc--cccccCC--CCCcccEEEeC
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-SLGAD-EVL--DYKTPD--GAALKSP--SGRKYDAVIHC 139 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~-~v~--~~~~~~--~~~~~~~--~~~~~d~v~d~ 139 (240)
+++|+|++|++|..+++.+...|++|+.+++. ++.+.+. .++.. ..+ |..+.. ...+... ...++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 68999999999999999999999999999875 4444432 34432 122 222211 1111111 12469999999
Q ss_pred CCC
Q 045248 140 ATG 142 (240)
Q Consensus 140 ~g~ 142 (240)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 874
No 304
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.025 Score=44.87 Aligned_cols=74 Identities=14% Similarity=0.096 Sum_probs=45.9
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH----HHhcCCCE-EEeCCCCccc----cccC--CCCCcccEE
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF----VKSLGADE-VLDYKTPDGA----ALKS--PSGRKYDAV 136 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~----~~~~g~~~-v~~~~~~~~~----~~~~--~~~~~~d~v 136 (240)
+++|+||+|++|..+++.+...|++|+.+.++ ++.+. ++..+... .+..+-.+.. .+.. ....++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 68999999999999998888899999988864 33332 22334332 2211111111 1111 112469999
Q ss_pred EeCCCC
Q 045248 137 IHCATG 142 (240)
Q Consensus 137 ~d~~g~ 142 (240)
|.++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999984
No 305
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.08 E-value=0.11 Score=41.43 Aligned_cols=95 Identities=19% Similarity=0.131 Sum_probs=67.7
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
..||+....+..+ +..++. -.|++++|+|.+.-+|.-+..++...|+.|+.+.+. ..++..
T Consensus 138 ~~PcTp~av~~ll-~~~~i~----l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~------------- 199 (285)
T PRK10792 138 LRPCTPRGIMTLL-ERYGID----TYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHH------------- 199 (285)
T ss_pred CCCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHH-------------
Confidence 4578776777677 555553 279999999976679999999999999988877643 221110
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
. ...|+++.++|.+.+-. -+.++++..++.+|..
T Consensus 200 -----~-----~~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin 233 (285)
T PRK10792 200 -----V-----RNADLLVVAVGKPGFIP-GEWIKPGAIVIDVGIN 233 (285)
T ss_pred -----H-----hhCCEEEEcCCCccccc-HHHcCCCcEEEEcccc
Confidence 0 34788999998765322 2678888888888843
No 306
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.07 E-value=0.029 Score=46.42 Aligned_cols=36 Identities=25% Similarity=0.262 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
..+.+|||+||+|.+|..+++.+...|++|+++.++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~ 43 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRD 43 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999999999999999999988764
No 307
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.06 E-value=0.025 Score=43.43 Aligned_cols=91 Identities=8% Similarity=-0.011 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc--ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA--RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~--~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 142 (240)
-++.+|||+| +|.++.-=++.+...|++|.++++. +....+.+.|....+. ++.....+ .++++||-+++.
T Consensus 23 ~~~~~VLVVG-GG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~-r~~~~~dl-----~g~~LViaATdD 95 (223)
T PRK05562 23 SNKIKVLIIG-GGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIK-GNYDKEFI-----KDKHLIVIATDD 95 (223)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChHHh-----CCCcEEEECCCC
Confidence 3678999999 8999988788888899999999865 3444444444333322 22111112 468999999987
Q ss_pred CCccccccCC-CCCcEEEEeC
Q 045248 143 IPWSTFEPNL-GTNGKVIDIT 162 (240)
Q Consensus 143 ~~~~~~~~~l-~~~G~iv~~g 162 (240)
+.++..+... +..+.++...
T Consensus 96 ~~vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 96 EKLNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred HHHHHHHHHHHHHcCCeEEEc
Confidence 6655444433 3446555543
No 308
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.05 E-value=0.018 Score=44.87 Aligned_cols=77 Identities=18% Similarity=0.114 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcC--CC-EEEeC--CCCc-c-ccccC--CCCCccc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLG--AD-EVLDY--KTPD-G-AALKS--PSGRKYD 134 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g--~~-~v~~~--~~~~-~-~~~~~--~~~~~~d 134 (240)
+++++||+||+|++|..+++.+...|++|+.++++ ++.+.+ .++. .. ..+.. .+.. . ..+.. ....++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 56799999999999999999888899999999975 444333 2222 21 12211 1111 1 11111 1124689
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999984
No 309
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.04 E-value=0.017 Score=46.16 Aligned_cols=93 Identities=19% Similarity=0.212 Sum_probs=64.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEe-CCCCccccccCCCCCcccEEEeCC---
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLD-YKTPDGAALKSPSGRKYDAVIHCA--- 140 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~-~~~~~~~~~~~~~~~~~d~v~d~~--- 140 (240)
+..+|.|+| .|.+|.-+..+|..+|++|...+.+ +|++++..+-..++-. ++.. ..+++ .-.+.|++|..+
T Consensus 167 ~~~kv~iiG-GGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~--~~iee-~v~~aDlvIgaVLIp 242 (371)
T COG0686 167 LPAKVVVLG-GGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTP--SNIEE-AVKKADLVIGAVLIP 242 (371)
T ss_pred CCccEEEEC-CccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCH--HHHHH-HhhhccEEEEEEEec
Confidence 345677888 7999999999999999999999965 8888887654333211 2221 11111 114688998876
Q ss_pred CCC---C-ccccccCCCCCcEEEEeC
Q 045248 141 TGI---P-WSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 141 g~~---~-~~~~~~~l~~~G~iv~~g 162 (240)
|.. . .++.++.++||+.++.+.
T Consensus 243 gakaPkLvt~e~vk~MkpGsVivDVA 268 (371)
T COG0686 243 GAKAPKLVTREMVKQMKPGSVIVDVA 268 (371)
T ss_pred CCCCceehhHHHHHhcCCCcEEEEEE
Confidence 332 1 567789999999998774
No 310
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.021 Score=43.83 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=45.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-hcCCCEEEeCCCCcccccc-CCC-CCcccEEEeCCCC
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-SLGADEVLDYKTPDGAALK-SPS-GRKYDAVIHCATG 142 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~v~~~~~~~~~~~~-~~~-~~~~d~v~d~~g~ 142 (240)
.++++|.||+|.+|..++..+... ++|+++.++ ++.+.+. +.....++..+-.+...+. ... -.++|.++.++|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 367999999999999988777766 899999875 4444333 2221223322222211111 111 1269999999984
No 311
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.02 E-value=0.035 Score=50.02 Aligned_cols=76 Identities=18% Similarity=0.201 Sum_probs=50.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc----------------------cHHHHHhcCCCEEEeCCCCcc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR----------------------NIEFVKSLGADEVLDYKTPDG 122 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~----------------------~~~~~~~~g~~~v~~~~~~~~ 122 (240)
..+++|+|+| +|+.|+.++..+...|++|+++.+.. +.+.++++|.+...+..-...
T Consensus 325 ~~~~~VaIIG-aGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIG-AGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 3688999999 99999999999999999998887532 244556777543322111000
Q ss_pred ccccCCCCCcccEEEeCCCC
Q 045248 123 AALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 123 ~~~~~~~~~~~d~v~d~~g~ 142 (240)
..+.. ...++|.||.++|.
T Consensus 404 i~~~~-~~~~~DavilAtGa 422 (654)
T PRK12769 404 ISLES-LLEDYDAVFVGVGT 422 (654)
T ss_pred CCHHH-HHhcCCEEEEeCCC
Confidence 00111 11469999999985
No 312
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.02 E-value=0.063 Score=44.14 Aligned_cols=88 Identities=19% Similarity=0.126 Sum_probs=60.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC--
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI-- 143 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-- 143 (240)
.|++|.|+| .|.+|...++.++.+|++|++..+..+.......|.. . .+. ...+ ...|+|+-++...
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~--~--~~l-~ell-----~~aDiV~l~lP~t~~ 217 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAE--Y--RPL-EELL-----RESDFVSLHVPLTKE 217 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCE--e--cCH-HHHH-----hhCCEEEEeCCCChH
Confidence 689999999 9999999999999999999988865333333344432 1 110 1111 2468998888631
Q ss_pred C----ccccccCCCCCcEEEEeCCC
Q 045248 144 P----WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 144 ~----~~~~~~~l~~~G~iv~~g~~ 164 (240)
+ -...+..++++..++.++..
T Consensus 218 T~~~i~~~~~~~mk~ga~lIN~aRg 242 (333)
T PRK13243 218 TYHMINEERLKLMKPTAILVNTARG 242 (333)
T ss_pred HhhccCHHHHhcCCCCeEEEECcCc
Confidence 1 23566788999998888753
No 313
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.01 E-value=0.011 Score=49.11 Aligned_cols=73 Identities=23% Similarity=0.246 Sum_probs=49.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCC-CEEEEEeCc-ccHHHHHhcC---C-CEEEeCCCCccccccCCCCCcccEEEeCCC
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGN-THVTASCGA-RNIEFVKSLG---A-DEVLDYKTPDGAALKSPSGRKYDAVIHCAT 141 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g-~~v~~~~~~-~~~~~~~~~g---~-~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g 141 (240)
.+|||+| +|++|+.+++.+.+.| .+|++.+++ ++.+.+.... . ...+|-.+.+ ...+.. .++|+||++..
T Consensus 2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~-al~~li--~~~d~VIn~~p 77 (389)
T COG1748 2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVD-ALVALI--KDFDLVINAAP 77 (389)
T ss_pred CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChH-HHHHHH--hcCCEEEEeCC
Confidence 5799999 7999999999999999 599999986 7777775543 1 1233333221 111111 23599999997
Q ss_pred CCC
Q 045248 142 GIP 144 (240)
Q Consensus 142 ~~~ 144 (240)
...
T Consensus 78 ~~~ 80 (389)
T COG1748 78 PFV 80 (389)
T ss_pred chh
Confidence 644
No 314
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.00 E-value=0.21 Score=35.46 Aligned_cols=96 Identities=18% Similarity=0.130 Sum_probs=66.9
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
..|+........+ +..+++ -.|++++|+|.+..+|.-+..++...|+.|+.+.+. ...+..
T Consensus 7 ~~p~t~~a~~~ll-~~~~~~----~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~------------- 68 (140)
T cd05212 7 FVSPVAKAVKELL-NKEGVR----LDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSK------------- 68 (140)
T ss_pred ccccHHHHHHHHH-HHcCCC----CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHH-------------
Confidence 4466655555555 555553 389999999999999999999999999999888753 222211
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCCc
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~~ 165 (240)
. +..|+|+-++|.+.+ ---+.+++|..++.+|...
T Consensus 69 -----v-----~~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 69 -----V-----HDADVVVVGSPKPEK-VPTEWIKPGATVINCSPTK 103 (140)
T ss_pred -----H-----hhCCEEEEecCCCCc-cCHHHcCCCCEEEEcCCCc
Confidence 0 347788888886542 2235688888888877543
No 315
>PRK06484 short chain dehydrogenase; Validated
Probab=96.00 E-value=0.021 Score=49.84 Aligned_cols=78 Identities=23% Similarity=0.264 Sum_probs=51.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcCCCE-E--EeCCCCc-c-ccccCC--CCCcccE
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLGADE-V--LDYKTPD-G-AALKSP--SGRKYDA 135 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~-v--~~~~~~~-~-~~~~~~--~~~~~d~ 135 (240)
.++++++|+|+++++|.++++.+...|++|+.+.++ ++.+.+ ++++... . .|..++. . ..+... ...++|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 467899999999999999999999999999999864 454433 4555432 1 2322222 1 111111 1246999
Q ss_pred EEeCCCC
Q 045248 136 VIHCATG 142 (240)
Q Consensus 136 v~d~~g~ 142 (240)
++.+.|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999874
No 316
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.99 E-value=0.031 Score=44.18 Aligned_cols=77 Identities=16% Similarity=0.105 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCC-EEEeCCCCccc----cccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGAD-EVLDYKTPDGA----ALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~-~v~~~~~~~~~----~~~~--~~~~~~ 133 (240)
.+++++|+|+++++|..++..+...|++|+.+.++ ++.+.+ ++.|.. ..+..+-.+.. .+.. ..-.++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 67899999999999999998888899999888864 433322 233432 22222211111 1111 011468
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999983
No 317
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.99 E-value=0.0099 Score=41.42 Aligned_cols=90 Identities=11% Similarity=0.124 Sum_probs=57.3
Q ss_pred EEEEcCCchHHHHHHHHHHhCC--CEEEEEeC--c-c-cHHHHHhcCCCEEEeCCCCcccc-------------------
Q 045248 70 ILVTAASGGVGHYAVQLAKLGN--THVTASCG--A-R-NIEFVKSLGADEVLDYKTPDGAA------------------- 124 (240)
Q Consensus 70 vlV~G~~g~vG~~~~~~a~~~g--~~v~~~~~--~-~-~~~~~~~~g~~~v~~~~~~~~~~------------------- 124 (240)
|.|.|++|.+|..++++.+.+. ++|++..- + + -.+.++++.+..+.-.++.....
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 5789999999999999999988 68888883 2 2 24566788887776544322110
Q ss_pred --ccCCCCCcccEEEeCCCCC-CccccccCCCCCcEEE
Q 045248 125 --LKSPSGRKYDAVIHCATGI-PWSTFEPNLGTNGKVI 159 (240)
Q Consensus 125 --~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv 159 (240)
.+......+|+++..+.+. -+...+..++.+=++.
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia 118 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA 118 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence 0111225689998888663 3777777777654443
No 318
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.019 Score=46.67 Aligned_cols=35 Identities=23% Similarity=0.210 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+||++++|..+++.+...|++|+.++++
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999888999999999875
No 319
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.97 E-value=0.027 Score=44.45 Aligned_cols=77 Identities=18% Similarity=0.224 Sum_probs=47.3
Q ss_pred CCCCeEEEEcCCc--hHHHHHHHHHHhCCCEEEEEeCccc----HHHH-HhcCCCEEE--eCCCCc--cccccC--CCCC
Q 045248 65 GQQKNILVTAASG--GVGHYAVQLAKLGNTHVTASCGARN----IEFV-KSLGADEVL--DYKTPD--GAALKS--PSGR 131 (240)
Q Consensus 65 ~~g~~vlV~G~~g--~vG~~~~~~a~~~g~~v~~~~~~~~----~~~~-~~~g~~~v~--~~~~~~--~~~~~~--~~~~ 131 (240)
-.++.++|+||++ ++|.++++.+...|++|+...++++ .+.+ ++.|....+ |-.+.. ...++. ..-.
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3678999999886 8999999888889999988775422 2222 233433222 333322 111111 1124
Q ss_pred cccEEEeCCC
Q 045248 132 KYDAVIHCAT 141 (240)
Q Consensus 132 ~~d~v~d~~g 141 (240)
++|+++.+.|
T Consensus 86 ~iDilVnnag 95 (260)
T PRK06603 86 SFDFLLHGMA 95 (260)
T ss_pred CccEEEEccc
Confidence 6999999887
No 320
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.97 E-value=0.031 Score=43.40 Aligned_cols=77 Identities=21% Similarity=0.245 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcCCC-EEEeCCCCcccc----ccC--CCCCcccEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLGAD-EVLDYKTPDGAA----LKS--PSGRKYDAV 136 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~-~v~~~~~~~~~~----~~~--~~~~~~d~v 136 (240)
++++++|.|++|++|..+++.+...|++|+...+. ++.+.+ ...+.. ..+..+-.+... ... ..-.++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 56899999999999999999888899988877654 444433 334432 222221111111 111 012469999
Q ss_pred EeCCCC
Q 045248 137 IHCATG 142 (240)
Q Consensus 137 ~d~~g~ 142 (240)
+.+.|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999984
No 321
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.95 E-value=0.036 Score=44.95 Aligned_cols=77 Identities=18% Similarity=0.091 Sum_probs=47.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc--ccHH----HHHhcCCCEEEe---CCCCc--cccccC-CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA--RNIE----FVKSLGADEVLD---YKTPD--GAALKS-PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~--~~~~----~~~~~g~~~v~~---~~~~~--~~~~~~-~~~~~~ 133 (240)
.+++++|+|++|++|...++.+...|++|+..++. .+.+ .++..|....+. ..+.+ ...++. ....++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 67899999999999999999888899999888742 2222 223344332221 11111 111111 012479
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|++|.++|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999999984
No 322
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=95.95 E-value=0.035 Score=45.31 Aligned_cols=95 Identities=11% Similarity=0.089 Sum_probs=58.5
Q ss_pred eEEEEcCCchHHHHHHHHHHhCC----CEEEEEeCc---ccHHHHHhcCCCE-----EEeC-------CCCccccc----
Q 045248 69 NILVTAASGGVGHYAVQLAKLGN----THVTASCGA---RNIEFVKSLGADE-----VLDY-------KTPDGAAL---- 125 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g----~~v~~~~~~---~~~~~~~~~g~~~-----v~~~-------~~~~~~~~---- 125 (240)
+|.|+| .|.+|...++.+...+ ++|+.+... +.+.++.++...+ -+.. ........
T Consensus 1 ~IaInG-fGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAING-FGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEEC-CCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 478999 6999999999988654 677777642 3445554433210 0000 01010111
Q ss_pred -cCC--CCCcccEEEeCCCCCC-ccccccCCCCCcEEEEeCCC
Q 045248 126 -KSP--SGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 126 -~~~--~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~ 164 (240)
... ...++|+|++|+|... ...+...++.|++.|.++.+
T Consensus 80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 111 2358999999999754 66677788888888888754
No 323
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=95.94 E-value=0.038 Score=41.38 Aligned_cols=94 Identities=14% Similarity=0.103 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCC-CEEEEEeCcccHHHHHhcCCCEEE--eCCCCc-c-ccccCCCCCcccEEEe-
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGN-THVTASCGARNIEFVKSLGADEVL--DYKTPD-G-AALKSPSGRKYDAVIH- 138 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~g~~~v~--~~~~~~-~-~~~~~~~~~~~d~v~d- 138 (240)
+++++||.+| +|.-++......+..+ .+|++++.+..+ +..+.. ++ +..+.. . ...+.....++|+|+.
T Consensus 31 ~~g~~VLDiG-~GtG~~~~~l~~~~~~~~~v~~vDis~~~---~~~~i~-~~~~d~~~~~~~~~l~~~~~~~~~D~V~~~ 105 (188)
T TIGR00438 31 KPGDTVLDLG-AAPGGWSQVAVEQVGGKGRVIAVDLQPMK---PIENVD-FIRGDFTDEEVLNKIRERVGDDKVDVVMSD 105 (188)
T ss_pred CCCCEEEEec-CCCCHHHHHHHHHhCCCceEEEEeccccc---cCCCce-EEEeeCCChhHHHHHHHHhCCCCccEEEcC
Confidence 7899999999 6665554433333334 389999865322 112222 22 222211 1 1112234567999995
Q ss_pred C----CCC-------------CCccccccCCCCCcEEEEeCC
Q 045248 139 C----ATG-------------IPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 139 ~----~g~-------------~~~~~~~~~l~~~G~iv~~g~ 163 (240)
. .|. ..+..+.+.|+++|+++....
T Consensus 106 ~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~ 147 (188)
T TIGR00438 106 AAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVF 147 (188)
T ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 2 221 125567889999999887543
No 324
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.94 E-value=0.038 Score=43.68 Aligned_cols=77 Identities=17% Similarity=0.190 Sum_probs=46.9
Q ss_pred CCCeEEEEcC--CchHHHHHHHHHHhCCCEEEEEeCccc-HHHHH----hcCCCEEE--eCCCCc--cccccC--CCCCc
Q 045248 66 QQKNILVTAA--SGGVGHYAVQLAKLGNTHVTASCGARN-IEFVK----SLGADEVL--DYKTPD--GAALKS--PSGRK 132 (240)
Q Consensus 66 ~g~~vlV~G~--~g~vG~~~~~~a~~~g~~v~~~~~~~~-~~~~~----~~g~~~v~--~~~~~~--~~~~~~--~~~~~ 132 (240)
.+++++|+|| ++++|.++++.+...|++|+.+.+.++ .+.++ +.|....+ |-.+.+ ...+.. ....+
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999996 569999999999999999988764322 22222 33432223 222221 111111 11246
Q ss_pred ccEEEeCCCC
Q 045248 133 YDAVIHCATG 142 (240)
Q Consensus 133 ~d~v~d~~g~ 142 (240)
+|+++.++|-
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999999973
No 325
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.94 E-value=0.16 Score=40.91 Aligned_cols=94 Identities=18% Similarity=0.087 Sum_probs=65.7
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
.+||+....+..+ +..+++ -.|++|.|+|.++-+|.-...++...|+.|++..+. ...+.+
T Consensus 138 ~~PcTp~aii~lL-~~~~i~----l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~------------- 199 (301)
T PRK14194 138 LTPCTPSGCLRLL-EDTCGD----LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKAL------------- 199 (301)
T ss_pred CCCCcHHHHHHHH-HHhCCC----CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHH-------------
Confidence 4577776666666 555553 389999999966799999999999999999888643 211111
Q ss_pred CccccccCCCCCcccEEEeCCCCCC-ccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~ 164 (240)
. ...|+|+-++|.+. +... .+++|..++.+|..
T Consensus 200 -----~-----~~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin 233 (301)
T PRK14194 200 -----C-----RQADIVVAAVGRPRLIDAD--WLKPGAVVIDVGIN 233 (301)
T ss_pred -----H-----hcCCEEEEecCChhcccHh--hccCCcEEEEeccc
Confidence 0 23678888888644 3333 37888888888743
No 326
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.91 E-value=0.017 Score=47.14 Aligned_cols=40 Identities=13% Similarity=0.052 Sum_probs=34.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF 105 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~ 105 (240)
.|++++|+||++++|.+.++.+...|++|+.++++ ++.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~ 92 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKD 92 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHH
Confidence 58999999999999999998888899999999975 55443
No 327
>PRK08317 hypothetical protein; Provisional
Probab=95.91 E-value=0.027 Score=43.55 Aligned_cols=100 Identities=18% Similarity=0.208 Sum_probs=61.8
Q ss_pred hhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC--CEEEEEeCc-ccHHHHHhc--CCCEEEeCCCCccccccCCC
Q 045248 55 QSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN--THVTASCGA-RNIEFVKSL--GADEVLDYKTPDGAALKSPS 129 (240)
Q Consensus 55 ~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g--~~v~~~~~~-~~~~~~~~~--g~~~v~~~~~~~~~~~~~~~ 129 (240)
+...+ .++.+||-+| +|. |..+..++...+ .++++++.+ +..+.+++. .....+.....+..... ..
T Consensus 13 ~~~~~-----~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~ 84 (241)
T PRK08317 13 ELLAV-----QPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLP-FP 84 (241)
T ss_pred HHcCC-----CCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCC-CC
Confidence 55566 7889999999 554 888888888773 589999964 566666544 11111111111111111 12
Q ss_pred CCcccEEEeCCC-----C--CCccccccCCCCCcEEEEeC
Q 045248 130 GRKYDAVIHCAT-----G--IPWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 130 ~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~iv~~g 162 (240)
...||+|+-.-. . ..+..+.++|+++|.++...
T Consensus 85 ~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 85 DGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred CCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 356898875432 2 23778888999999988664
No 328
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.023 Score=44.81 Aligned_cols=39 Identities=21% Similarity=0.278 Sum_probs=33.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHH
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIE 104 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~ 104 (240)
.+++++|+||++++|..+++.+...|++|+.+.++ ++.+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~ 46 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLA 46 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 57899999999999999999999999999998875 4443
No 329
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.89 E-value=0.041 Score=42.69 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
.+++++|.|++|++|..++..+...|++|+++.+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~ 37 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYA 37 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 5678999999999999999999999999877764
No 330
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.023 Score=44.91 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
++++++|+||+|++|..+++.+...|++|+.+.++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999999999999864
No 331
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=95.88 E-value=0.017 Score=45.55 Aligned_cols=72 Identities=6% Similarity=-0.048 Sum_probs=48.6
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCC
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCAT 141 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g 141 (240)
+|||.||+|- |..++..+...|.+|+++..+ .+.+.+...|...+....-............++|+|+|++.
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATH 74 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence 6899997775 999888888889999988865 55666666665555532221122223344567899999885
No 332
>PLN00198 anthocyanidin reductase; Provisional
Probab=95.87 E-value=0.046 Score=44.89 Aligned_cols=36 Identities=14% Similarity=0.126 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
..+++|||+||+|.+|..+++.+...|++|+++.++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~ 42 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRD 42 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECC
Confidence 357899999999999999999999899999888754
No 333
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.86 E-value=0.046 Score=43.52 Aligned_cols=78 Identities=14% Similarity=0.102 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCC--chHHHHHHHHHHhCCCEEEEEeCcc----cHHHH-HhcCCCEEEeC--CCCc--cccccC--CCCC
Q 045248 65 GQQKNILVTAAS--GGVGHYAVQLAKLGNTHVTASCGAR----NIEFV-KSLGADEVLDY--KTPD--GAALKS--PSGR 131 (240)
Q Consensus 65 ~~g~~vlV~G~~--g~vG~~~~~~a~~~g~~v~~~~~~~----~~~~~-~~~g~~~v~~~--~~~~--~~~~~~--~~~~ 131 (240)
-.++++||+||+ +++|.++++.+...|++|+.+.+++ +.+.+ ++++....+.. .+.. ...+.. ....
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 367899999986 7999999999999999998876542 22222 34453222322 2211 111111 1124
Q ss_pred cccEEEeCCCC
Q 045248 132 KYDAVIHCATG 142 (240)
Q Consensus 132 ~~d~v~d~~g~ 142 (240)
++|+++.+.|.
T Consensus 88 ~iD~lv~nAG~ 98 (272)
T PRK08159 88 KLDFVVHAIGF 98 (272)
T ss_pred CCcEEEECCcc
Confidence 69999999873
No 334
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.85 E-value=0.024 Score=44.54 Aligned_cols=77 Identities=21% Similarity=0.181 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH----hcCCC-EEE--eCCCCc-c-ccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK----SLGAD-EVL--DYKTPD-G-AALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~----~~g~~-~v~--~~~~~~-~-~~~~~--~~~~~~ 133 (240)
.++++||+|++|++|..+++.+...|++|+.++++ ++.+... ..+.. ..+ |..+.+ . ..+.. ....++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 67899999999999999999988899999998865 4433332 23322 122 222221 1 11111 011468
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|.++.+.|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999873
No 335
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.026 Score=43.82 Aligned_cols=35 Identities=29% Similarity=0.322 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
++++++|+|++|++|..+++.+...|++|+.++++
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARH 39 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 56899999999999999999999999999999875
No 336
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.85 E-value=0.024 Score=44.43 Aligned_cols=77 Identities=21% Similarity=0.208 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH----HHhcCCC-EEE--eCCCCc-c-ccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF----VKSLGAD-EVL--DYKTPD-G-AALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~----~~~~g~~-~v~--~~~~~~-~-~~~~~--~~~~~~ 133 (240)
.++++||+|++|++|..+++.+...|++|+.+.++ ++.+. +++.|.. ..+ |..+.. . ..+.. ....++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999888889999988865 33322 2233322 222 222221 1 11111 112468
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999984
No 337
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.84 E-value=0.13 Score=39.51 Aligned_cols=98 Identities=20% Similarity=0.160 Sum_probs=58.9
Q ss_pred hhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC--EEEEEeCc-ccHHHH----HhcCCCEEEeCCCCccccccC
Q 045248 55 QSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT--HVTASCGA-RNIEFV----KSLGADEVLDYKTPDGAALKS 127 (240)
Q Consensus 55 ~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~--~v~~~~~~-~~~~~~----~~~g~~~v~~~~~~~~~~~~~ 127 (240)
+...+ +++++||-+| +|.|..+..+++..+. +|++++.+ +..+.+ ++.|.+.+- ....+.... .
T Consensus 71 ~~l~~-----~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~-~~~~d~~~~-~ 141 (215)
T TIGR00080 71 ELLEL-----KPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVI-VIVGDGTQG-W 141 (215)
T ss_pred HHhCC-----CCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeE-EEECCcccC-C
Confidence 55666 7999999998 4456667777777653 79999854 444444 455543221 111111100 1
Q ss_pred CCCCcccEEEeCCCC-CCccccccCCCCCcEEEEe
Q 045248 128 PSGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 128 ~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~ 161 (240)
.....||+|+-.... .......+.|+++|+++..
T Consensus 142 ~~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 142 EPLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred cccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 122479998754433 3356777899999998754
No 338
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.83 E-value=0.047 Score=39.78 Aligned_cols=78 Identities=18% Similarity=0.216 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEe-C-cccHHHHHhcCCCEEEeCCCCc-cccc------cCCCCCcccE
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASC-G-ARNIEFVKSLGADEVLDYKTPD-GAAL------KSPSGRKYDA 135 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~-~-~~~~~~~~~~g~~~v~~~~~~~-~~~~------~~~~~~~~d~ 135 (240)
.+|-.-||.|+++++|.+...-+...|+.|+..+ + +...+.++++|-..++.+.+-. ++.+ ....-+..|.
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 4667779999999999999999999999988888 3 3678889999987777544322 1111 1112245799
Q ss_pred EEeCCCC
Q 045248 136 VIHCATG 142 (240)
Q Consensus 136 v~d~~g~ 142 (240)
.++|.|-
T Consensus 87 ~vncagi 93 (260)
T KOG1199|consen 87 LVNCAGI 93 (260)
T ss_pred eeeccce
Confidence 9999984
No 339
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.83 E-value=0.16 Score=40.48 Aligned_cols=95 Identities=15% Similarity=0.104 Sum_probs=66.5
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
..||+....+..+ +..+++ -.|++|+|+|.+.-+|.-+..++...|+.|..+.+. ..++ +
T Consensus 136 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~---~----------- 196 (285)
T PRK14191 136 FVPATPMGVMRLL-KHYHIE----IKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLS---F----------- 196 (285)
T ss_pred CCCCcHHHHHHHH-HHhCCC----CCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHH---H-----------
Confidence 4577776666666 555653 379999999977799999999999999998776432 1111 0
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
.. +..|+++-++|.+.+-. -+.+++|..++.+|..
T Consensus 197 ----~~-----~~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 197 ----YT-----QNADIVCVGVGKPDLIK-ASMVKKGAVVVDIGIN 231 (285)
T ss_pred ----HH-----HhCCEEEEecCCCCcCC-HHHcCCCcEEEEeecc
Confidence 00 34788888888765422 3467888888888853
No 340
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.037 Score=43.00 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
++++++|+|++|++|..+++.+...|++++.+.+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~ 37 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYA 37 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC
Confidence 6789999999999999999999999998887764
No 341
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.005 Score=47.56 Aligned_cols=73 Identities=16% Similarity=0.109 Sum_probs=46.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHHHHhcCCC-EEEeCCCCc-c-cccc-CCCCCcccEEEeCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGAD-EVLDYKTPD-G-AALK-SPSGRKYDAVIHCAT 141 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~-~v~~~~~~~-~-~~~~-~~~~~~~d~v~d~~g 141 (240)
.+++++|+|++|++|..+++.+...|++|+.+.++.... .... ...|..+.. . ..++ .....++|+++.+.|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 357899999999999999999999999999998752211 1111 112333222 1 1111 111236899999988
Q ss_pred C
Q 045248 142 G 142 (240)
Q Consensus 142 ~ 142 (240)
.
T Consensus 78 ~ 78 (234)
T PRK07577 78 I 78 (234)
T ss_pred C
Confidence 4
No 342
>PRK09186 flagellin modification protein A; Provisional
Probab=95.82 E-value=0.027 Score=44.13 Aligned_cols=38 Identities=26% Similarity=0.232 Sum_probs=33.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccH
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNI 103 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~ 103 (240)
.+++++|+|++|++|..++..+...|++|+.+.++ ++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~ 41 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEAL 41 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHH
Confidence 57899999999999999999999999999998864 443
No 343
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.025 Score=44.31 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|.||+|++|..+++.+...|++|+.+.++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART 38 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 67899999999999999999999999999999864
No 344
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.80 E-value=0.037 Score=44.99 Aligned_cols=36 Identities=31% Similarity=0.345 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
..+++|||+||+|.+|..++..+...|.+|++++++
T Consensus 2 ~~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 2 GEGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred CCCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 356899999999999999999999999999988864
No 345
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=95.80 E-value=0.027 Score=41.39 Aligned_cols=96 Identities=19% Similarity=0.147 Sum_probs=60.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHHHhcCCCEEEeCC-CC---------------c--ccccc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEVLDYK-TP---------------D--GAALK 126 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~-~~---------------~--~~~~~ 126 (240)
+..+|+|.| +|.+|+.++++++.+|++|+..+. .++.+..+..+...+.... +. . ...+.
T Consensus 19 ~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 457899999 999999999999999999999985 4777778777765443311 00 0 00010
Q ss_pred CCCCCcccEEEeCC---CC--CC--ccccccCCCCCcEEEEeCC
Q 045248 127 SPSGRKYDAVIHCA---TG--IP--WSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 127 ~~~~~~~d~v~d~~---g~--~~--~~~~~~~l~~~G~iv~~g~ 163 (240)
..=..+|++|-+. +. +. -+..++.++++..|+.+..
T Consensus 98 -~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 98 -EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp -HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred -HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 0013478888543 22 21 4467778899999988864
No 346
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.79 E-value=0.027 Score=41.54 Aligned_cols=90 Identities=18% Similarity=0.176 Sum_probs=57.2
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcC--CCEEEeCCCCccccccCCCCCcccEEEeCCCCC-C
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLG--ADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI-P 144 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g--~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~ 144 (240)
+|.|+||+|-+|..+++=|+.+|-.|++++++ .+....+..- -..+++... ... .-.|+|+||++.|.. +
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~----~a~--~l~g~DaVIsA~~~~~~ 75 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTS----LAS--DLAGHDAVISAFGAGAS 75 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhh----hHh--hhcCCceEEEeccCCCC
Confidence 58899999999999999999999999999976 4443221110 011222111 001 125799999999854 1
Q ss_pred -c--------cccccCCCCCc--EEEEeCCC
Q 045248 145 -W--------STFEPNLGTNG--KVIDITPG 164 (240)
Q Consensus 145 -~--------~~~~~~l~~~G--~iv~~g~~ 164 (240)
- +..++.|+.-| |++.+|..
T Consensus 76 ~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 76 DNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred ChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 1 22555666644 67777643
No 347
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.027 Score=44.02 Aligned_cols=35 Identities=34% Similarity=0.368 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|.|++|++|..+++.+...|++|+.+.+.
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~ 41 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRK 41 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56899999999999999999999999999999864
No 348
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.76 E-value=0.041 Score=43.36 Aligned_cols=34 Identities=6% Similarity=0.065 Sum_probs=30.1
Q ss_pred CCCeEEEEcCC--chHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAAS--GGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~--g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
.+++++|+||+ +++|.++++.+...|++|+.+.+
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r 41 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYA 41 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecC
Confidence 57899999986 79999999988899999988865
No 349
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.04 Score=44.33 Aligned_cols=35 Identities=17% Similarity=0.212 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.++++||+|++|++|..+++.+...|++|+.+.+.
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999998888899999888753
No 350
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.73 E-value=0.2 Score=35.95 Aligned_cols=92 Identities=13% Similarity=0.109 Sum_probs=56.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCC-CEEEEEeCc-ccHH-HHHhcCCCE-EEeCCCCccccccCCCCCcccEEEeCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGN-THVTASCGA-RNIE-FVKSLGADE-VLDYKTPDGAALKSPSGRKYDAVIHCAT 141 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g-~~v~~~~~~-~~~~-~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~d~v~d~~g 141 (240)
++.+++|+| +|++|...++.+...| .+|++..++ ++.+ .+++++... .....+. ... -.++|+|+.+++
T Consensus 18 ~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~Dvvi~~~~ 90 (155)
T cd01065 18 KGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL-EEL-----LAEADLIINTTP 90 (155)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch-hhc-----cccCCEEEeCcC
Confidence 578999999 6999999998888886 578888764 4443 345555421 0111111 111 256999999998
Q ss_pred CCCc-----cccccCCCCCcEEEEeCCC
Q 045248 142 GIPW-----STFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 142 ~~~~-----~~~~~~l~~~G~iv~~g~~ 164 (240)
.... ......++++..++.++..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 91 VGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred CCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 6432 1112335666666666543
No 351
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.73 E-value=0.12 Score=41.15 Aligned_cols=65 Identities=12% Similarity=0.193 Sum_probs=44.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHH-HhcCCCEEEeCCCCccccccCCCCCcccEEEeCCC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCAT 141 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g 141 (240)
..+++++|.| +||.+.+++..+...|+ +|+++.++ ++.+.+ +.++.. +.. .. ....+|+|++|+.
T Consensus 120 ~~~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~~~----~~---~~~~~dlvINaTp 187 (272)
T PRK12550 120 PPDLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----WRP----DL---GGIEADILVNVTP 187 (272)
T ss_pred CCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----chh----hc---ccccCCEEEECCc
Confidence 3456899999 89999999999999998 68888875 444443 444311 110 01 1235899999985
No 352
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.72 E-value=0.023 Score=44.06 Aligned_cols=70 Identities=27% Similarity=0.303 Sum_probs=49.7
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc---cHHHHHhcCCCEEEeCCCCccccc-cCCCCCcccEEEeCCCC
Q 045248 70 ILVTAASGGVGHYAVQLAKLGNTHVTASCGAR---NIEFVKSLGADEVLDYKTPDGAAL-KSPSGRKYDAVIHCATG 142 (240)
Q Consensus 70 vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~---~~~~~~~~g~~~v~~~~~~~~~~~-~~~~~~~~d~v~d~~g~ 142 (240)
|+|+||+|.+|...++.+...+.+|.+.+++. ..+.+++.|+..+ ..+-.+...+ ... .|+|.||-+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al--~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-EADYDDPESLVAAL--KGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT-HHHHHHHH--TTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-ecccCCHHHHHHHH--cCCceEEeecCc
Confidence 78999999999999999999888999999853 3566677888543 3222222221 111 479999988884
No 353
>PRK08589 short chain dehydrogenase; Validated
Probab=95.71 E-value=0.031 Score=44.45 Aligned_cols=77 Identities=19% Similarity=0.141 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHH----HHhcCCC-EEE--eCCCCc--cccccCC--CCCccc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEF----VKSLGAD-EVL--DYKTPD--GAALKSP--SGRKYD 134 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~----~~~~g~~-~v~--~~~~~~--~~~~~~~--~~~~~d 134 (240)
.++++||+|+++++|..+++.+...|++|+.+.++++.+. +++.+.. ..+ |..+.. ...+... .-.++|
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 84 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVD 84 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence 5789999999999999999988889999999986533222 2233322 222 222222 1111110 114689
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
+++.+.|.
T Consensus 85 ~li~~Ag~ 92 (272)
T PRK08589 85 VLFNNAGV 92 (272)
T ss_pred EEEECCCC
Confidence 99999873
No 354
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=95.70 E-value=0.14 Score=39.01 Aligned_cols=96 Identities=20% Similarity=0.115 Sum_probs=59.2
Q ss_pred hhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCC--CEEEEEeCc-ccHHHH----HhcCCC---EEEeCCCCcccc
Q 045248 55 QSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGN--THVTASCGA-RNIEFV----KSLGAD---EVLDYKTPDGAA 124 (240)
Q Consensus 55 ~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g--~~v~~~~~~-~~~~~~----~~~g~~---~v~~~~~~~~~~ 124 (240)
+...+ +++++||=+| + |.|..+..+++..+ .+|++++.+ +..+.+ ++.|.. .++..+.. ..
T Consensus 66 ~~l~~-----~~~~~VLDiG-~-GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~--~~ 136 (205)
T PRK13944 66 ELIEP-----RPGMKILEVG-T-GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGK--RG 136 (205)
T ss_pred HhcCC-----CCCCEEEEEC-c-CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcc--cC
Confidence 55556 7889999998 3 45777777777664 489999964 434433 344532 22221111 11
Q ss_pred ccCCCCCcccEEEeCCCCCC-ccccccCCCCCcEEEEe
Q 045248 125 LKSPSGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 125 ~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~ 161 (240)
.. ....||.|+-+..... .....+.|++||+++..
T Consensus 137 ~~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 137 LE--KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred Cc--cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 11 1357999987665433 45677899999998754
No 355
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.70 E-value=0.016 Score=43.87 Aligned_cols=91 Identities=16% Similarity=0.089 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH----hcCCCEEEeCCCCccccccCCCCCcccEEEeC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVIHC 139 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 139 (240)
.++.+||-.| +| .|..+..+++. |.+|++++.+ +..+.++ ..+...+ .....+..... ....||+|+..
T Consensus 29 ~~~~~vLDiG-cG-~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~~~~~--~~~~fD~I~~~ 102 (197)
T PRK11207 29 VKPGKTLDLG-CG-NGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDLNNLT--FDGEYDFILST 102 (197)
T ss_pred CCCCcEEEEC-CC-CCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecChhhCC--cCCCcCEEEEe
Confidence 5668899998 44 47777777764 8899999954 4444443 2232211 11111111111 13469999876
Q ss_pred CCC---------CCccccccCCCCCcEEEEe
Q 045248 140 ATG---------IPWSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 140 ~g~---------~~~~~~~~~l~~~G~iv~~ 161 (240)
..- ..+..+.+.|+++|.++.+
T Consensus 103 ~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 103 VVLMFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred cchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 431 1256677789999996543
No 356
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.67 E-value=0.034 Score=43.72 Aligned_cols=77 Identities=22% Similarity=0.272 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccH-HHH---HhcCCCE-E--EeCCCCc--cccccC--CCCCccc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNI-EFV---KSLGADE-V--LDYKTPD--GAALKS--PSGRKYD 134 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~-~~~---~~~g~~~-v--~~~~~~~--~~~~~~--~~~~~~d 134 (240)
.++++||+||+|++|..+++.+...|++|+.+.+++.. +.. ++.+.+. . .|..+.. ...+.. ....++|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 57899999999999999999999999999988865322 222 2334321 1 2333321 111111 1124699
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
+++.++|.
T Consensus 87 ~lv~nAg~ 94 (260)
T PRK12823 87 VLINNVGG 94 (260)
T ss_pred EEEECCcc
Confidence 99999973
No 357
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.66 E-value=0.039 Score=45.42 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=29.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
++|||+||+|.+|..+++.+...|.+|+++++.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~ 33 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRR 33 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecC
Confidence 479999999999999999999999999998864
No 358
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.65 E-value=0.028 Score=43.21 Aligned_cols=94 Identities=14% Similarity=-0.008 Sum_probs=54.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHH-HhcCCCEE---------EeCCCCcc--ccccC---C
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFV-KSLGADEV---------LDYKTPDG--AALKS---P 128 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~-~~~g~~~v---------~~~~~~~~--~~~~~---~ 128 (240)
.++.+||+.| .|.|.-++.+|. +|++|++++- +...+.+ ++.+.... ....+-.. ..+.. .
T Consensus 36 ~~~~rvL~~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~ 112 (218)
T PRK13255 36 PAGSRVLVPL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAA 112 (218)
T ss_pred CCCCeEEEeC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCcc
Confidence 5678999998 456777777764 7999999994 4544443 33332211 00000000 00111 1
Q ss_pred CCCcccEEEeCCC---------CCCccccccCCCCCcEEEEe
Q 045248 129 SGRKYDAVIHCAT---------GIPWSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 129 ~~~~~d~v~d~~g---------~~~~~~~~~~l~~~G~iv~~ 161 (240)
....||.|+|... ...+..+.++|+|+|+++.+
T Consensus 113 ~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 113 DLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred cCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 1246899999774 12366788899999875543
No 359
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.059 Score=43.21 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
-.+++++|+||++++|..+++.+...|++|+.+.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~ 38 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI 38 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeC
Confidence 36789999999999999999988889999888764
No 360
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.031 Score=43.45 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=33.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHh
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKS 108 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~ 108 (240)
.+++|+||+|++|..++..+...|++|++++++ ++.+.+.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 43 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT 43 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 568999999999999888888899999999875 55555544
No 361
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.62 E-value=0.083 Score=35.98 Aligned_cols=71 Identities=21% Similarity=0.258 Sum_probs=49.9
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC
Q 045248 70 ILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 70 vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 142 (240)
|+|+| .|.+|..+++.++..+.+|+.++.+ ++.+.+++.|. .++..+..+...++..+-..++.++-+.+.
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~-~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGV-EVIYGDATDPEVLERAGIEKADAVVILTDD 72 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTS-EEEES-TTSHHHHHHTTGGCESEEEEESSS
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhccc-ccccccchhhhHHhhcCccccCEEEEccCC
Confidence 57899 8999999999999977799999975 78888888884 455444433334444444567777766664
No 362
>PLN02686 cinnamoyl-CoA reductase
Probab=95.61 E-value=0.048 Score=45.45 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=34.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV 106 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~ 106 (240)
..+++|||+||+|.+|..+++.+...|++|+++.++ ++.+.+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l 93 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL 93 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 578899999999999999999999999999887754 433333
No 363
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.60 E-value=0.034 Score=43.64 Aligned_cols=77 Identities=17% Similarity=0.145 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH-HhcCCC-EEE--eCCCCc--cccccC--CCCCcccEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV-KSLGAD-EVL--DYKTPD--GAALKS--PSGRKYDAV 136 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~-~v~--~~~~~~--~~~~~~--~~~~~~d~v 136 (240)
.+++++|+|++|++|..+++.+...|++|+.++++ ++.+.+ ++++.. ..+ |-.+.. ...+.. ....++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 56789999999999999999999999999999865 444333 334322 122 222211 111111 011468999
Q ss_pred EeCCCC
Q 045248 137 IHCATG 142 (240)
Q Consensus 137 ~d~~g~ 142 (240)
+.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998873
No 364
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=95.59 E-value=0.058 Score=40.27 Aligned_cols=75 Identities=21% Similarity=0.237 Sum_probs=51.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc--ccHHHHHhcCC--CE-EE--eCCCCc-cc----cccCCCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA--RNIEFVKSLGA--DE-VL--DYKTPD-GA----ALKSPSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~--~~~~~~~~~g~--~~-v~--~~~~~~-~~----~~~~~~~~~~ 133 (240)
..+..+|.|++.++|.+..|.+...|++|.+.+.+ ...+.++.+|. ++ .+ |..++. .+ .... .-..+
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k-~~g~p 91 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEK-SLGTP 91 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHH-hcCCC
Confidence 45678899999999999999999999999999953 45556677764 22 22 222222 11 1111 22378
Q ss_pred cEEEeCCC
Q 045248 134 DAVIHCAT 141 (240)
Q Consensus 134 d~v~d~~g 141 (240)
+++++|.|
T Consensus 92 svlVncAG 99 (256)
T KOG1200|consen 92 SVLVNCAG 99 (256)
T ss_pred cEEEEcCc
Confidence 99999998
No 365
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.57 E-value=0.26 Score=39.43 Aligned_cols=96 Identities=15% Similarity=0.083 Sum_probs=67.3
Q ss_pred hhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCC
Q 045248 40 SGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYK 118 (240)
Q Consensus 40 a~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~ 118 (240)
...||+....+..+ +..++. -.|++++|+|.+.-+|.-+..++...|+.|+.+.+. ..++..
T Consensus 142 ~~~PcTp~av~~ll-~~~~i~----l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~------------ 204 (287)
T PRK14176 142 GLVPCTPHGVIRAL-EEYGVD----IEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKY------------ 204 (287)
T ss_pred CCCCCcHHHHHHHH-HHcCCC----CCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHH------------
Confidence 34577766666666 555553 389999999977779999999999999988777642 222111
Q ss_pred CCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 119 TPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 119 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
-...|+++-++|.+.+- --+.++++..++.+|..
T Consensus 205 -----------~~~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin 238 (287)
T PRK14176 205 -----------TLDADILVVATGVKHLI-KADMVKEGAVIFDVGIT 238 (287)
T ss_pred -----------HhhCCEEEEccCCcccc-CHHHcCCCcEEEEeccc
Confidence 03477888888875532 34578888888888863
No 366
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.57 E-value=0.049 Score=42.54 Aligned_cols=36 Identities=22% Similarity=0.134 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR 101 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~ 101 (240)
+++++||+|++|++|..+++.+...|++|+.+.++.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence 578999999999999999999989999999998654
No 367
>PLN00016 RNA-binding protein; Provisional
Probab=95.56 E-value=0.04 Score=46.13 Aligned_cols=94 Identities=15% Similarity=0.151 Sum_probs=57.4
Q ss_pred CCCeEEEE----cCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH-----------HHhcCCCEEEeCCCCccccccCCC
Q 045248 66 QQKNILVT----AASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF-----------VKSLGADEVLDYKTPDGAALKSPS 129 (240)
Q Consensus 66 ~g~~vlV~----G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~-----------~~~~g~~~v~~~~~~~~~~~~~~~ 129 (240)
...+|||+ ||+|-+|..+++.+...|.+|+++++. ..... +...|...+.- +-.+.. ....
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~-D~~d~~--~~~~ 127 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWG-DPADVK--SKVA 127 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEe-cHHHHH--hhhc
Confidence 45789999 999999999999998899999999975 32221 12233332221 111111 1112
Q ss_pred CCcccEEEeCCCCCC--ccccccCCCCCc--EEEEeC
Q 045248 130 GRKYDAVIHCATGIP--WSTFEPNLGTNG--KVIDIT 162 (240)
Q Consensus 130 ~~~~d~v~d~~g~~~--~~~~~~~l~~~G--~iv~~g 162 (240)
..++|+|+++.+... ....++.++..| ++|.++
T Consensus 128 ~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~S 164 (378)
T PLN00016 128 GAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCS 164 (378)
T ss_pred cCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEc
Confidence 357999999987532 334445554333 677665
No 368
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=95.56 E-value=0.043 Score=45.82 Aligned_cols=36 Identities=19% Similarity=0.111 Sum_probs=32.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
..+++|||+|++|-+|..++..+...|.+|+++++.
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~ 54 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWK 54 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEec
Confidence 567899999999999999999999999999999864
No 369
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.55 E-value=0.054 Score=42.25 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=29.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEe
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASC 98 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~ 98 (240)
++++++|+||+|++|..+++.+...|++|+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~ 35 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNY 35 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence 567999999999999999999999999887643
No 370
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.039 Score=43.18 Aligned_cols=77 Identities=17% Similarity=0.174 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHH----HHHhcCCC-EEE--eCCCCc--cccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIE----FVKSLGAD-EVL--DYKTPD--GAALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~----~~~~~g~~-~v~--~~~~~~--~~~~~~--~~~~~~ 133 (240)
.+++++|.|++|++|..+++.+...|++|+.+.++ ++.+ .+++.+.. ..+ |..+.. ...++. ..-.++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999998888899999999865 3332 22334432 222 222211 111111 011368
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999884
No 371
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.52 E-value=0.036 Score=43.25 Aligned_cols=36 Identities=25% Similarity=0.193 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
-++++++|.|++|++|..+++.+...|++|+.++++
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence 478899999999999999998888889999998864
No 372
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.51 E-value=0.039 Score=43.22 Aligned_cols=77 Identities=18% Similarity=0.177 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCC-EEE--eCCCCc--cccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGAD-EVL--DYKTPD--GAALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~-~v~--~~~~~~--~~~~~~--~~~~~~ 133 (240)
.++++||+||+|++|..+++.+...|++|+.+.++ ++.+.+ ++.+.. ..+ |-.+.+ ...+.. ....++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999888899999998864 433222 233322 122 222221 111111 112468
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999983
No 373
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.49 E-value=0.053 Score=42.10 Aligned_cols=35 Identities=29% Similarity=0.298 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEE-eCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTAS-CGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~-~~~ 100 (240)
.++++||.|++|++|..++..+...|++|+.+ .++
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~ 39 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDIN 39 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 45789999999999999998888889998888 654
No 374
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.49 E-value=0.094 Score=41.52 Aligned_cols=35 Identities=17% Similarity=0.149 Sum_probs=30.0
Q ss_pred CCCeEEEEcCCc--hHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASG--GVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g--~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+||++ ++|.++++.+...|++|+.+.++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 578999999875 89999998888899999887764
No 375
>PRK06398 aldose dehydrogenase; Validated
Probab=95.47 E-value=0.034 Score=43.78 Aligned_cols=35 Identities=26% Similarity=0.224 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.++++||+|++|++|..+++.+...|++|+.+.++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~ 39 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK 39 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 57899999999999999999999999999998865
No 376
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.47 E-value=0.063 Score=43.02 Aligned_cols=73 Identities=10% Similarity=-0.006 Sum_probs=46.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHH-HhcCCC-EEEeCCCCccccccCCCCCcccEEEeCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFV-KSLGAD-EVLDYKTPDGAALKSPSGRKYDAVIHCAT 141 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g 141 (240)
++++++|+| +|+.+.+++..+...|+ +|+++.++ ++.+.+ +.++.. .+...... ..... .-..+|+||+|++
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~--~~~~~-~~~~~DiVInaTp 199 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGD--SGGLA-IEKAAEVLVSTVP 199 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccch--hhhhh-cccCCCEEEECCC
Confidence 578999999 89999999999999998 78888775 554443 444321 11111100 00000 1145899999987
Q ss_pred C
Q 045248 142 G 142 (240)
Q Consensus 142 ~ 142 (240)
.
T Consensus 200 ~ 200 (282)
T TIGR01809 200 A 200 (282)
T ss_pred C
Confidence 4
No 377
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.46 E-value=0.047 Score=42.62 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=29.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
.++++||.||+|++|..+++-+...|++|+.+.+
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~ 38 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK 38 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 4689999999999999999888899998877664
No 378
>PRK07985 oxidoreductase; Provisional
Probab=95.46 E-value=0.038 Score=44.53 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
.+++++|+||+|++|..+++.+...|++|+.+.+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~ 81 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYL 81 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC
Confidence 5689999999999999999999999999988764
No 379
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=95.46 E-value=0.28 Score=37.68 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
.+.+|+|.| .|.+|..+++++...|+++++++.
T Consensus 22 ~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD 54 (217)
T cd05211 22 EGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSD 54 (217)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEc
Confidence 789999999 999999999999999998877774
No 380
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.056 Score=42.29 Aligned_cols=33 Identities=27% Similarity=0.224 Sum_probs=28.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEe
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASC 98 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~ 98 (240)
.+.+++|+|++|++|..+++.+...|++|+...
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~ 37 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHY 37 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence 457999999999999999998888999887654
No 381
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=95.44 E-value=0.16 Score=42.33 Aligned_cols=60 Identities=23% Similarity=0.273 Sum_probs=43.7
Q ss_pred CChhhhhhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 34 VSAAEGSGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 34 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
...+++....+.+.+- .++ +..+.. =+|.+|.|.| .|.+|..+++.+...|++|++++.+
T Consensus 180 ~~r~~aTg~Gv~~~~~-~a~-~~~g~~----l~G~rVaVQG-~GNVg~~aa~~l~~~GAkvva~sds 239 (411)
T COG0334 180 LGRSEATGYGVFYAIR-EAL-KALGDD----LEGARVAVQG-FGNVGQYAAEKLHELGAKVVAVSDS 239 (411)
T ss_pred CCCCcccceehHHHHH-HHH-HHcCCC----cCCCEEEEEC-ccHHHHHHHHHHHHcCCEEEEEEcC
Confidence 3345555555554333 444 444431 1899999999 9999999999999889999999843
No 382
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.43 E-value=0.074 Score=46.05 Aligned_cols=68 Identities=19% Similarity=0.119 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc--c----HHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR--N----IEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHC 139 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~--~----~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 139 (240)
.+++|+|+| .|++|+.++.+++..|++|++++..+ . .+.+++.|......... . ...++|+|+-+
T Consensus 15 ~~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~-----~~~~~D~Vv~s 85 (480)
T PRK01438 15 QGLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGP---T-----LPEDTDLVVTS 85 (480)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c-----ccCCCCEEEEC
Confidence 577999999 89999999999999999999887431 1 24456677643322111 1 12458999988
Q ss_pred CCC
Q 045248 140 ATG 142 (240)
Q Consensus 140 ~g~ 142 (240)
.|-
T Consensus 86 ~Gi 88 (480)
T PRK01438 86 PGW 88 (480)
T ss_pred CCc
Confidence 884
No 383
>PRK09242 tropinone reductase; Provisional
Probab=95.42 E-value=0.044 Score=43.05 Aligned_cols=35 Identities=20% Similarity=0.122 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+|++|++|..+++.+...|++|+.+.++
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~ 42 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARD 42 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 57899999999999999999999999999999864
No 384
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.42 E-value=0.12 Score=43.49 Aligned_cols=71 Identities=23% Similarity=0.312 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-cc-HHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RN-IEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 142 (240)
.+.++||+| +|-+|..++..+...|. +|+..-++ ++ .+.++++|+. ++..++.. ..+ ..+|+||-++|.
T Consensus 177 ~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~el~-~~l-----~~~DvVissTsa 248 (414)
T COG0373 177 KDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEELL-EAL-----AEADVVISSTSA 248 (414)
T ss_pred ccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHHHH-Hhh-----hhCCEEEEecCC
Confidence 789999999 89999999999999998 55555565 44 5567899953 33332211 111 358999999987
Q ss_pred CC
Q 045248 143 IP 144 (240)
Q Consensus 143 ~~ 144 (240)
+.
T Consensus 249 ~~ 250 (414)
T COG0373 249 PH 250 (414)
T ss_pred Cc
Confidence 54
No 385
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=95.40 E-value=0.04 Score=44.59 Aligned_cols=72 Identities=21% Similarity=0.200 Sum_probs=42.8
Q ss_pred EEEEcCCchHHHHHHHHHHhCCC-EEEEEeCcccHHHHHhcCCCEEEeCC-CCc-cccccCCCCCcccEEEeCCC
Q 045248 70 ILVTAASGGVGHYAVQLAKLGNT-HVTASCGARNIEFVKSLGADEVLDYK-TPD-GAALKSPSGRKYDAVIHCAT 141 (240)
Q Consensus 70 vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~g~~~v~~~~-~~~-~~~~~~~~~~~~d~v~d~~g 141 (240)
|||+||+|.+|..+++.+...|. .|+++.+..+.....+++...+.+.. +.. ...+....-.++|+|+.+++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcc
Confidence 68999999999999999999998 78777654322222223222222111 111 11111101157999999987
No 386
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.046 Score=42.97 Aligned_cols=39 Identities=13% Similarity=0.186 Sum_probs=32.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF 105 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~ 105 (240)
+++++|+|++|++|..+++.+...|++|+.+.+. ++.+.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~ 41 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQA 41 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 3689999999999999998888889999998864 44433
No 387
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.39 E-value=0.29 Score=38.99 Aligned_cols=95 Identities=22% Similarity=0.208 Sum_probs=67.4
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
..||+....+..+ +..++. -.|++++|+|.+.-+|.=+..++...|+.|+..-+. ..++..
T Consensus 137 ~~PcTp~av~~lL-~~~~i~----l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~------------- 198 (278)
T PRK14172 137 FLPCTPNSVITLI-KSLNID----IEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEV------------- 198 (278)
T ss_pred CcCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence 4577766666666 555553 389999999999999999999999999988776642 222211
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
. +..|+++-++|.+.+ ---+.+++|..++.+|..
T Consensus 199 -----~-----~~ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin 232 (278)
T PRK14172 199 -----C-----KKADILVVAIGRPKF-IDEEYVKEGAIVIDVGTS 232 (278)
T ss_pred -----H-----hhCCEEEEcCCCcCc-cCHHHcCCCcEEEEeecc
Confidence 0 237788888887653 224568888888888854
No 388
>PLN03139 formate dehydrogenase; Provisional
Probab=95.38 E-value=0.12 Score=43.23 Aligned_cols=89 Identities=18% Similarity=0.117 Sum_probs=60.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC-
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI- 143 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~- 143 (240)
.|++|.|+| .|.+|...++.++.+|++|++.++. ...+..++.|+..+ .+. ...+ ...|+|+-++...
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~---~~l-~ell-----~~sDvV~l~lPlt~ 267 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE---EDL-DAML-----PKCDVVVINTPLTE 267 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec---CCH-HHHH-----hhCCEEEEeCCCCH
Confidence 688999999 9999999999999999999988764 34444455554321 110 1111 2368888877631
Q ss_pred -C----ccccccCCCCCcEEEEeCCC
Q 045248 144 -P----WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 144 -~----~~~~~~~l~~~G~iv~~g~~ 164 (240)
+ -...+..++++..+|.++-.
T Consensus 268 ~T~~li~~~~l~~mk~ga~lIN~aRG 293 (386)
T PLN03139 268 KTRGMFNKERIAKMKKGVLIVNNARG 293 (386)
T ss_pred HHHHHhCHHHHhhCCCCeEEEECCCC
Confidence 1 12466788898888888753
No 389
>PRK12827 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.075 Score=41.29 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=29.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
.+.+++|+||+|++|..+++.+...|++|+.+.+
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 4678999999999999999888899999888664
No 390
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.37 E-value=0.075 Score=41.58 Aligned_cols=33 Identities=15% Similarity=0.113 Sum_probs=29.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
++++|+|++|++|..+++.+...|++|+.+.+.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~ 35 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRP 35 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecC
Confidence 579999999999999999999999999988853
No 391
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.37 E-value=0.5 Score=38.64 Aligned_cols=33 Identities=27% Similarity=0.076 Sum_probs=29.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
-++|.|+| +|.+|...++.+...|++|...+.+
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~ 39 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPA 39 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46899999 8999999999988999999999854
No 392
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.36 E-value=0.029 Score=43.26 Aligned_cols=73 Identities=23% Similarity=0.201 Sum_probs=45.7
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH-hcCCCE-EEeCCCCccccccCCCCCcccEEEeCCCCC
Q 045248 70 ILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK-SLGADE-VLDYKTPDGAALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 70 vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 143 (240)
|||.||+|-+|..++..+...|..|+.+.+. .+..... +..... ..|..+.+ ...+......+|.|+.+++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~-~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKE-QLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHH-HHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccc-cccccccccCceEEEEeeccc
Confidence 7999999999999999999999998888864 3332222 222211 11222211 111112223689999999863
No 393
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.035 Score=43.63 Aligned_cols=35 Identities=23% Similarity=0.285 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
+++++||+|++|++|..+++.+...|++|+.+.++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARS 42 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999999999999875
No 394
>PRK11579 putative oxidoreductase; Provisional
Probab=95.35 E-value=0.35 Score=39.96 Aligned_cols=132 Identities=11% Similarity=0.034 Sum_probs=74.6
Q ss_pred CeEEEEcCCchHHH-HHHHHH-HhCCCEEEEEeCcccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC-
Q 045248 68 KNILVTAASGGVGH-YAVQLA-KLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP- 144 (240)
Q Consensus 68 ~~vlV~G~~g~vG~-~~~~~a-~~~g~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~- 144 (240)
-+|.|+| +|.+|. ...... +.-+++++++++....+..++++...++ .+ ...+ .....+|+|+-++....
T Consensus 5 irvgiiG-~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~~--~~el--l~~~~vD~V~I~tp~~~H 77 (346)
T PRK11579 5 IRVGLIG-YGYASKTFHAPLIAGTPGLELAAVSSSDATKVKADWPTVTVV--SE--PQHL--FNDPNIDLIVIPTPNDTH 77 (346)
T ss_pred ceEEEEC-CCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHHhhCCCCcee--CC--HHHH--hcCCCCCEEEEcCCcHHH
Confidence 4799999 899996 344444 4456799888864322222344322222 11 1111 12357999999998755
Q ss_pred ccccccCCCCCcEEEEeCCCchHH---HHHHHhhheeccceeeeEEEcCCHHHHHHHHHHHHCCce
Q 045248 145 WSTFEPNLGTNGKVIDITPGPSAM---LTFALKKLTFSKKQLVPLLLIPKRENLDFLVKLVKEGKL 207 (240)
Q Consensus 145 ~~~~~~~l~~~G~iv~~g~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i 207 (240)
...+..+++. |+-|++..+-... ..........++..+...+.......++.+.+++++|.+
T Consensus 78 ~~~~~~al~a-GkhVl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~k~~i~~g~i 142 (346)
T PRK11579 78 FPLAKAALEA-GKHVVVDKPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTLKALLAEGVL 142 (346)
T ss_pred HHHHHHHHHC-CCeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHHHHHHhcCCC
Confidence 6677777766 5556676432211 111122222334444333333455678889999999865
No 395
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.35 E-value=0.068 Score=43.74 Aligned_cols=76 Identities=18% Similarity=0.139 Sum_probs=44.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCC--CEEEEEeCc-ccHHHH-HhcCC--CEEEeCCCCccccccCCCCCcccEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGN--THVTASCGA-RNIEFV-KSLGA--DEVLDYKTPDGAALKSPSGRKYDAVIHC 139 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g--~~v~~~~~~-~~~~~~-~~~g~--~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 139 (240)
.++++||+||+|.+|..+++.+...| .+|++++++ .+...+ +.+.. ...+..+-.+...+...- .++|+||.+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~-~~iD~Vih~ 81 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL-RGVDYVVHA 81 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH-hcCCEEEEC
Confidence 46899999999999999988777665 588888764 333222 22321 112211111111111111 258999999
Q ss_pred CCC
Q 045248 140 ATG 142 (240)
Q Consensus 140 ~g~ 142 (240)
+|.
T Consensus 82 Ag~ 84 (324)
T TIGR03589 82 AAL 84 (324)
T ss_pred ccc
Confidence 873
No 396
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.34 E-value=0.046 Score=42.58 Aligned_cols=35 Identities=20% Similarity=0.164 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+||+|++|..++..+...|++|+++.++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 56899999999999999998888889999999875
No 397
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=95.33 E-value=0.11 Score=42.08 Aligned_cols=52 Identities=21% Similarity=0.285 Sum_probs=45.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc----ccHHHHHhcCCCEEEe
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA----RNIEFVKSLGADEVLD 116 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~----~~~~~~~~~g~~~v~~ 116 (240)
.||.++||-.-+|++|..+..++...|++++.+.++ +|...++.+|+.-|..
T Consensus 101 ~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 101 TPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILT 156 (362)
T ss_pred cCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEec
Confidence 899999999999999999999999999999988852 6888899999976653
No 398
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.32 E-value=0.043 Score=42.88 Aligned_cols=40 Identities=23% Similarity=0.189 Sum_probs=32.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV 106 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~ 106 (240)
++++||+|++|++|..++..+...|++|++++++ ++.+.+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~ 41 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAA 41 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3579999999999999998888899999999875 444333
No 399
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=95.31 E-value=0.087 Score=41.01 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=29.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
++++++|+|++|++|..++..+...|++|+++.+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~ 38 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYN 38 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcC
Confidence 5789999999999999999988889998887653
No 400
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.29 E-value=0.084 Score=41.67 Aligned_cols=77 Identities=18% Similarity=0.187 Sum_probs=47.1
Q ss_pred CCCeEEEEcC--CchHHHHHHHHHHhCCCEEEEEeCc----ccHHHH-HhcCCCEEE--eCCCCc--cccccCC--CCCc
Q 045248 66 QQKNILVTAA--SGGVGHYAVQLAKLGNTHVTASCGA----RNIEFV-KSLGADEVL--DYKTPD--GAALKSP--SGRK 132 (240)
Q Consensus 66 ~g~~vlV~G~--~g~vG~~~~~~a~~~g~~v~~~~~~----~~~~~~-~~~g~~~v~--~~~~~~--~~~~~~~--~~~~ 132 (240)
.+++++|+|| ++++|.++++.+...|++|+.+.+. ++.+.+ ++++....+ |..+++ ...++.. ..++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999996 5799999998888899999887532 222222 344532222 222222 1111111 1247
Q ss_pred ccEEEeCCCC
Q 045248 133 YDAVIHCATG 142 (240)
Q Consensus 133 ~d~v~d~~g~ 142 (240)
+|+++.+.|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999999873
No 401
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.29 E-value=0.28 Score=40.24 Aligned_cols=91 Identities=9% Similarity=0.141 Sum_probs=57.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHH-HhCCC-EEEEEeCc-ccHH-HHHh----cCCCEEEeCCCCccccccCCCCCcccEE
Q 045248 65 GQQKNILVTAASGGVGHYAVQLA-KLGNT-HVTASCGA-RNIE-FVKS----LGADEVLDYKTPDGAALKSPSGRKYDAV 136 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a-~~~g~-~v~~~~~~-~~~~-~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~d~v 136 (240)
+..++++|+| +|+.|...+..+ ...++ +|.+..++ ++.+ ++++ ++.. +..+.+. ...+ ...|+|
T Consensus 125 ~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~~-~~~~-----~~aDiV 196 (325)
T PRK08618 125 EDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNSA-DEAI-----EEADII 196 (325)
T ss_pred CCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCCH-HHHH-----hcCCEE
Confidence 4678899999 999998777554 46788 55555554 4433 3333 3432 2212211 1112 358999
Q ss_pred EeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 137 IHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 137 ~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
+.|+++...... +.+++|-++..+|..
T Consensus 197 i~aT~s~~p~i~-~~l~~G~hV~~iGs~ 223 (325)
T PRK08618 197 VTVTNAKTPVFS-EKLKKGVHINAVGSF 223 (325)
T ss_pred EEccCCCCcchH-HhcCCCcEEEecCCC
Confidence 999986442223 888999899999854
No 402
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.29 E-value=0.044 Score=42.39 Aligned_cols=76 Identities=17% Similarity=0.163 Sum_probs=57.1
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH-HH-hcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCCc
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF-VK-SLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIPW 145 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~-~~-~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 145 (240)
+++|.| +|.+|...++.+...|..|+.+..+ ++.+. +. +... +++..+..+...+++.+-..+|+++=++|....
T Consensus 2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~ 79 (225)
T COG0569 2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDATDEDVLEEAGIDDADAVVAATGNDEV 79 (225)
T ss_pred EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHH
Confidence 578999 9999999999999999999999975 56555 33 3443 455444444556666677889999999997553
Q ss_pred c
Q 045248 146 S 146 (240)
Q Consensus 146 ~ 146 (240)
.
T Consensus 80 N 80 (225)
T COG0569 80 N 80 (225)
T ss_pred H
Confidence 3
No 403
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=95.28 E-value=0.027 Score=45.03 Aligned_cols=66 Identities=24% Similarity=0.140 Sum_probs=42.5
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC
Q 045248 70 ILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 70 vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 142 (240)
|||+||+|-+|..+++.+...|++|++++++ .+.+.....+ +.+.... ...+ .-.++|+|+.+++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~--~~~~--~~~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPL--AESE--ALEGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eeccccc--chhh--hcCCCCEEEECCCC
Confidence 5899999999999999988899999999974 3322221111 1111111 1111 11469999999974
No 404
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.28 E-value=0.088 Score=38.46 Aligned_cols=107 Identities=18% Similarity=0.138 Sum_probs=63.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC--
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP-- 144 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-- 144 (240)
.+|.++| .|.+|...++-+...|++|.+..+. ++.+.+.+.|+... +.. .... ...|+|+-++.+..
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-~s~---~e~~-----~~~dvvi~~v~~~~~v 71 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-DSP---AEAA-----EQADVVILCVPDDDAV 71 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-SSH---HHHH-----HHBSEEEE-SSSHHHH
T ss_pred CEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-hhh---hhHh-----hcccceEeecccchhh
Confidence 4688999 9999999999999999999999865 77777777774322 111 1111 23589999887522
Q ss_pred ---ccc--cccCCCCCcEEEEeCCCchHHHHHHHhhheeccceee
Q 045248 145 ---WST--FEPNLGTNGKVIDITPGPSAMLTFALKKLTFSKKQLV 184 (240)
Q Consensus 145 ---~~~--~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~ 184 (240)
+.. .+..++++..++.++.............+..++..+.
T Consensus 72 ~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~v 116 (163)
T PF03446_consen 72 EAVLFGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYV 116 (163)
T ss_dssp HHHHHCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEE
T ss_pred hhhhhhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccceee
Confidence 223 5666777778888876554433333333333444333
No 405
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.28 E-value=0.056 Score=39.25 Aligned_cols=75 Identities=21% Similarity=0.279 Sum_probs=45.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc---ccHHHH----HhcCCC-EEEeC--CCCc--cccccC--CCCCc
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA---RNIEFV----KSLGAD-EVLDY--KTPD--GAALKS--PSGRK 132 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~---~~~~~~----~~~g~~-~v~~~--~~~~--~~~~~~--~~~~~ 132 (240)
++++|+||++++|..+++.+-..|. +|+.+.++ ++.+.+ +..+.. .++.. .+.. ...++. .....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4789999999999998888887777 66666655 333322 334532 22221 1111 111111 23457
Q ss_pred ccEEEeCCCC
Q 045248 133 YDAVIHCATG 142 (240)
Q Consensus 133 ~d~v~d~~g~ 142 (240)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999985
No 406
>PLN02214 cinnamoyl-CoA reductase
Probab=95.27 E-value=0.083 Score=43.59 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.++++|||+||+|.+|..+++.+...|.+|+++.+.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~ 43 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRN 43 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 367899999999999999999999999999998864
No 407
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.25 E-value=0.049 Score=42.96 Aligned_cols=94 Identities=18% Similarity=0.205 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHh----cCCCEEEeCCCCccccccCCCCCcccEEEeCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKS----LGADEVLDYKTPDGAALKSPSGRKYDAVIHCA 140 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~ 140 (240)
++.+||=+| +|.|..+..+++. |.+|++++.+ +..+.+++ .|...-+.....+...........||+|+-..
T Consensus 44 ~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~~~ 120 (255)
T PRK11036 44 RPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILFHA 120 (255)
T ss_pred CCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEehh
Confidence 557888887 4567777777774 8899999954 55555543 33211111111111111112235799998543
Q ss_pred C-----C--CCccccccCCCCCcEEEEeC
Q 045248 141 T-----G--IPWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 141 g-----~--~~~~~~~~~l~~~G~iv~~g 162 (240)
. . ..+..+.+.|+|+|.++.+-
T Consensus 121 vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 121 VLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred HHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 2 2 12678888999999987654
No 408
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.24 E-value=0.34 Score=38.69 Aligned_cols=95 Identities=18% Similarity=0.161 Sum_probs=68.6
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
.+||+....+..+ +..++. -.|++++|+|.+.-+|.=+..++...|+.|+.+.+. ..++..
T Consensus 138 ~~PcTp~avi~ll-~~y~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~------------- 199 (284)
T PRK14177 138 YLPCTPYGMVLLL-KEYGID----VTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSI------------- 199 (284)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence 4577766666666 555553 389999999999999999999999999988877642 322211
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
. +..|+++-++|.+.+ -.-+.+++|..++.+|..
T Consensus 200 -----~-----~~ADIvIsAvGk~~~-i~~~~ik~gavVIDvGin 233 (284)
T PRK14177 200 -----V-----RQADIIVGAVGKPEF-IKADWISEGAVLLDAGYN 233 (284)
T ss_pred -----H-----hhCCEEEEeCCCcCc-cCHHHcCCCCEEEEecCc
Confidence 0 347888888887654 225678899888888864
No 409
>PRK05855 short chain dehydrogenase; Validated
Probab=95.23 E-value=0.049 Score=48.07 Aligned_cols=77 Identities=23% Similarity=0.150 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCC-EEE--eCCCCc--cccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGAD-EVL--DYKTPD--GAALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~-~v~--~~~~~~--~~~~~~--~~~~~~ 133 (240)
.+.++||+||+|++|..+++-+...|++|+.+.++ ++.+.+ ++.|.. ..+ |..+.. ...+.. ...+++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 56789999999999999999888999999998865 343332 333432 222 222221 111111 112469
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.++|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999984
No 410
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.043 Score=42.94 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+||+|++|..+++.+...|++|+.++++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~ 39 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR 39 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999999999999875
No 411
>PRK01581 speE spermidine synthase; Validated
Probab=95.22 E-value=0.077 Score=43.80 Aligned_cols=96 Identities=17% Similarity=0.170 Sum_probs=55.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHHHhcCC-C----EEEeCC-----CCcccc-ccCCCCC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFVKSLGA-D----EVLDYK-----TPDGAA-LKSPSGR 131 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~-~----~v~~~~-----~~~~~~-~~~~~~~ 131 (240)
...++|||+| ||.|..+..+++..+. +|++++-+ +-.+.++++.. . ..++.. -.+... +. ...+
T Consensus 149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~-~~~~ 225 (374)
T PRK01581 149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLS-SPSS 225 (374)
T ss_pred CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHH-hcCC
Confidence 3457999999 4466677777776654 88888854 55677765210 0 001000 011111 11 2345
Q ss_pred cccEEEeCCCCC------------CccccccCCCCCcEEEEeCC
Q 045248 132 KYDAVIHCATGI------------PWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 132 ~~d~v~d~~g~~------------~~~~~~~~l~~~G~iv~~g~ 163 (240)
.||+|+--+..+ .+..+.+.|+++|.++.-..
T Consensus 226 ~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 226 LYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 799986544221 25567889999999876643
No 412
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.22 E-value=0.057 Score=42.34 Aligned_cols=77 Identities=19% Similarity=0.274 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH----HHhcCCC-EEE--eCCCCc--cccccCC--CCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF----VKSLGAD-EVL--DYKTPD--GAALKSP--SGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~----~~~~g~~-~v~--~~~~~~--~~~~~~~--~~~~~ 133 (240)
.+++++|.|++|++|..+++.+...|++|+.+.++ ++.+. +++.+.. ..+ |..+.. ...++.. .-.++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 68899999999999999998888899999999874 33322 2334422 222 222221 1111111 11368
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|.++.+.|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999999984
No 413
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.20 E-value=0.16 Score=42.37 Aligned_cols=78 Identities=15% Similarity=0.101 Sum_probs=47.8
Q ss_pred CCCCeEEEEcCCchHHHH--HHHHHHhCCCEEEEEeCc-c--c--------------HHHHHhcCCC-EEEeCCCCcc--
Q 045248 65 GQQKNILVTAASGGVGHY--AVQLAKLGNTHVTASCGA-R--N--------------IEFVKSLGAD-EVLDYKTPDG-- 122 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~--~~~~a~~~g~~v~~~~~~-~--~--------------~~~~~~~g~~-~v~~~~~~~~-- 122 (240)
..++++||+|+++++|++ +.+.+ ..|++++++... + + .+.+++.|.. ..+.-+-.+.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 456899999999999999 56666 899988887732 1 1 2234556643 2332222221
Q ss_pred --ccccC--CCCCcccEEEeCCCCC
Q 045248 123 --AALKS--PSGRKYDAVIHCATGI 143 (240)
Q Consensus 123 --~~~~~--~~~~~~d~v~d~~g~~ 143 (240)
..++. ..-+++|+++.+++.+
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 11111 1124699999999854
No 414
>PRK06487 glycerate dehydrogenase; Provisional
Probab=95.20 E-value=0.032 Score=45.54 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.|+++.|+| .|.+|...+++++.+|++|++..+.
T Consensus 147 ~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~ 180 (317)
T PRK06487 147 EGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLP 180 (317)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCC
Confidence 678999999 9999999999999999999988754
No 415
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=95.19 E-value=0.039 Score=42.08 Aligned_cols=93 Identities=15% Similarity=0.173 Sum_probs=58.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc--cHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR--NIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 143 (240)
.+++|||+| +|.+|.-=+.++...|++|+++..+. ....+.+.+....+. ...+.... .++++|+-+++.+
T Consensus 11 ~~k~VlvvG-gG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~-~~~~~~~~-----~~~~lviaAt~d~ 83 (210)
T COG1648 11 EGKKVLVVG-GGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE-REFDAEDL-----DDAFLVIAATDDE 83 (210)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh-cccChhhh-----cCceEEEEeCCCH
Confidence 788999999 89999999999999999999998653 333333333211111 11111111 2388888888875
Q ss_pred Cc-cccccCCCCCcEEEEeCCCc
Q 045248 144 PW-STFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 144 ~~-~~~~~~l~~~G~iv~~g~~~ 165 (240)
.+ ....+..++.++.|..-..+
T Consensus 84 ~ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 84 ELNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred HHHHHHHHHHHHhCCceeccCCc
Confidence 53 34555566667776665443
No 416
>PRK00811 spermidine synthase; Provisional
Probab=95.18 E-value=0.059 Score=43.22 Aligned_cols=95 Identities=19% Similarity=0.269 Sum_probs=54.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHHHhc----C--C--CEEEeCCCCcc-ccccCCCCCcc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFVKSL----G--A--DEVLDYKTPDG-AALKSPSGRKY 133 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~----g--~--~~v~~~~~~~~-~~~~~~~~~~~ 133 (240)
++.++||++| ||.|..+..+++..+. +|++++-+ +-.+.+++. + . +.-+.....+. ..+.. ..+.|
T Consensus 75 ~~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~-~~~~y 151 (283)
T PRK00811 75 PNPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAE-TENSF 151 (283)
T ss_pred CCCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhh-CCCcc
Confidence 4567999999 3447677777887676 88888854 545555432 1 1 00000001111 11111 34679
Q ss_pred cEEEeCCCCC-----------CccccccCCCCCcEEEEeC
Q 045248 134 DAVIHCATGI-----------PWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 134 d~v~d~~g~~-----------~~~~~~~~l~~~G~iv~~g 162 (240)
|+|+--+..+ .+..+.+.|+++|.++.-.
T Consensus 152 DvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 152 DVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred cEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 9997544211 1456778999999988643
No 417
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.16 E-value=0.061 Score=42.81 Aligned_cols=77 Identities=22% Similarity=0.198 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH----hcCCC--EE----EeCCCCc--cccc---cCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK----SLGAD--EV----LDYKTPD--GAAL---KSPS 129 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~----~~g~~--~v----~~~~~~~--~~~~---~~~~ 129 (240)
.++.++|+|++.|+|.+++..+...|++|+.+.++ ++.+..+ ..+.. .+ .|..+.+ .... .+..
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~ 86 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF 86 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999975 5443332 22221 11 1222222 1111 1122
Q ss_pred CCcccEEEeCCCC
Q 045248 130 GRKYDAVIHCATG 142 (240)
Q Consensus 130 ~~~~d~v~d~~g~ 142 (240)
..++|+.++..|.
T Consensus 87 ~GkidiLvnnag~ 99 (270)
T KOG0725|consen 87 FGKIDILVNNAGA 99 (270)
T ss_pred CCCCCEEEEcCCc
Confidence 4679999999884
No 418
>PRK14967 putative methyltransferase; Provisional
Probab=95.15 E-value=0.071 Score=41.12 Aligned_cols=89 Identities=24% Similarity=0.258 Sum_probs=53.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHHH----hcCCC-EEEeCCCCccccccCCCCCcccEEE
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFVK----SLGAD-EVLDYKTPDGAALKSPSGRKYDAVI 137 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~d~v~ 137 (240)
+++++||-.| +|. |..++.+++. ++ +|++++.+ ...+.++ ..+.. .++.. +.. .......||+|+
T Consensus 35 ~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~---d~~--~~~~~~~fD~Vi 106 (223)
T PRK14967 35 GPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG---DWA--RAVEFRPFDVVV 106 (223)
T ss_pred CCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC---chh--hhccCCCeeEEE
Confidence 6788999999 665 8888888875 66 89999954 4454443 34432 22221 111 111235799998
Q ss_pred eCCCC----C------------------------CccccccCCCCCcEEEEe
Q 045248 138 HCATG----I------------------------PWSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 138 d~~g~----~------------------------~~~~~~~~l~~~G~iv~~ 161 (240)
-...- . .+..+.+.|+++|+++.+
T Consensus 107 ~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 107 SNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred ECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 65320 0 123456788889988765
No 419
>PLN02928 oxidoreductase family protein
Probab=95.15 E-value=0.11 Score=42.94 Aligned_cols=92 Identities=16% Similarity=0.157 Sum_probs=57.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHHHHhcC----C-CEEEe--CCCCc-cccccCCCCCcccEEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLG----A-DEVLD--YKTPD-GAALKSPSGRKYDAVI 137 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g----~-~~v~~--~~~~~-~~~~~~~~~~~~d~v~ 137 (240)
.|+++.|+| .|.+|..+++.++.+|++|++..+..+.+....++ . ....+ ....+ ...+ ...|+|+
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell-----~~aDiVv 231 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFA-----GEADIVV 231 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHH-----hhCCEEE
Confidence 689999999 99999999999999999999988642222111111 0 00000 00001 1111 2468888
Q ss_pred eCCCC--CC----ccccccCCCCCcEEEEeCC
Q 045248 138 HCATG--IP----WSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 138 d~~g~--~~----~~~~~~~l~~~G~iv~~g~ 163 (240)
-++.. ++ -...+..++++..++.++-
T Consensus 232 l~lPlt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 232 LCCTLTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred ECCCCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 88762 11 2356678888888888863
No 420
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.14 E-value=0.37 Score=38.49 Aligned_cols=95 Identities=20% Similarity=0.144 Sum_probs=67.0
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
..||+.......+ +..++. -.|++++|+|.+.-+|.-+..++...|+.|+.+.+. ..++..
T Consensus 137 ~~PcTp~av~~lL-~~~~i~----l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~------------- 198 (284)
T PRK14190 137 FLPCTPHGILELL-KEYNID----ISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAEL------------- 198 (284)
T ss_pred CCCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHH-------------
Confidence 4577776666666 555653 389999999999999999999999999988876432 211111
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
. +..|+++-++|.+.+ -.-+.+++|..++.+|..
T Consensus 199 -----~-----~~ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~ 232 (284)
T PRK14190 199 -----T-----KQADILIVAVGKPKL-ITADMVKEGAVVIDVGVN 232 (284)
T ss_pred -----H-----HhCCEEEEecCCCCc-CCHHHcCCCCEEEEeecc
Confidence 0 346788888886553 223567888888888854
No 421
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=95.14 E-value=0.19 Score=40.56 Aligned_cols=91 Identities=15% Similarity=0.142 Sum_probs=56.7
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHHHhcCCCEEEeCCCCcc--ccccC-CCCCcccEEEeCCCCCC
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEVLDYKTPDG--AALKS-PSGRKYDAVIHCATGIP 144 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~~~~~--~~~~~-~~~~~~d~v~d~~g~~~ 144 (240)
+|+|+| +|.+|......+...|.+|+.+++ +++.+.+++.|... +..+... ..... ..-..+|+||-++....
T Consensus 2 ~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~d~vila~k~~~ 78 (304)
T PRK06522 2 KIAILG-AGAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAELGPQDLVILAVKAYQ 78 (304)
T ss_pred EEEEEC-CCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHcCCCCEEEEeccccc
Confidence 589999 899999988888888999999987 46666676656421 1000000 00010 01157899999998655
Q ss_pred ccccccC----CCCCcEEEEeC
Q 045248 145 WSTFEPN----LGTNGKVIDIT 162 (240)
Q Consensus 145 ~~~~~~~----l~~~G~iv~~g 162 (240)
...+++. +.++..++.+.
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~~ 100 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFLQ 100 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEec
Confidence 4444444 44445666554
No 422
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.14 E-value=0.26 Score=38.41 Aligned_cols=103 Identities=18% Similarity=0.192 Sum_probs=68.2
Q ss_pred hhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC--EEEEEe-CcccHHHH----HhcCCCEEEeCCCCccccccC
Q 045248 55 QSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT--HVTASC-GARNIEFV----KSLGADEVLDYKTPDGAALKS 127 (240)
Q Consensus 55 ~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~--~v~~~~-~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~ 127 (240)
.+.++ .+|++|+=-| -|.|.++.-+|.+.|- +|+... +++..+.+ +++|....+.....| ..+.
T Consensus 88 ~~~gi-----~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D--v~~~ 158 (256)
T COG2519 88 ARLGI-----SPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD--VREG 158 (256)
T ss_pred HHcCC-----CCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc--cccc
Confidence 56677 8999998766 4568888888887775 899888 45665555 345543322222222 1111
Q ss_pred CCCCcccEEEeCCCCC--CccccccCCCCCcEEEEeCCCch
Q 045248 128 PSGRKYDAVIHCATGI--PWSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 128 ~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
..+..||.++--...+ .++.+.+.|+++|.++.+.+..+
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P~ve 199 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSPTVE 199 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcCCHH
Confidence 2234799887666553 38889999999999998876543
No 423
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.13 E-value=0.39 Score=38.34 Aligned_cols=95 Identities=15% Similarity=0.124 Sum_probs=66.8
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
..||+....+..+ +..++. -.|++++|+|.+.-+|.=+..++...|+.|+..-+. ..++..
T Consensus 135 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~------------- 196 (282)
T PRK14169 135 VVASTPYGIMALL-DAYDID----VAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQL------------- 196 (282)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHH-------------
Confidence 4577766666666 555553 389999999988899999999999999988866542 222211
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
. +..|+++-++|.+.+ ---+.+++|..++.+|..
T Consensus 197 -----~-----~~ADIvI~AvG~p~~-i~~~~vk~GavVIDvGin 230 (282)
T PRK14169 197 -----T-----KEADILVVAVGVPHF-IGADAVKPGAVVIDVGIS 230 (282)
T ss_pred -----H-----hhCCEEEEccCCcCc-cCHHHcCCCcEEEEeecc
Confidence 0 236788888887654 224578888888888853
No 424
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=95.11 E-value=0.15 Score=36.69 Aligned_cols=96 Identities=13% Similarity=0.150 Sum_probs=54.3
Q ss_pred eEEEEcCCchHHHHHHHHHHh-CCCEEEEEeCc---ccHHHHHh----cCC-CEEEeCCCCc-------cccccCC----
Q 045248 69 NILVTAASGGVGHYAVQLAKL-GNTHVTASCGA---RNIEFVKS----LGA-DEVLDYKTPD-------GAALKSP---- 128 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~-~g~~v~~~~~~---~~~~~~~~----~g~-~~v~~~~~~~-------~~~~~~~---- 128 (240)
+|.|+| .|.+|...++.+.. .+.+++++... +...++-+ .|. ...+...+.. .......
T Consensus 2 kv~I~G-~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~ 80 (149)
T smart00846 2 KVGING-FGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN 80 (149)
T ss_pred EEEEEC-cCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence 588999 79999998888774 45677776642 33344422 221 0001111110 0011111
Q ss_pred ---CCCcccEEEeCCCC-CCccccccCCCCCcEEEEeCCCc
Q 045248 129 ---SGRKYDAVIHCATG-IPWSTFEPNLGTNGKVIDITPGP 165 (240)
Q Consensus 129 ---~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~ 165 (240)
...++|+|+||+|. .....+...++.|.+-|.++.+.
T Consensus 81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~ 121 (149)
T smart00846 81 LPWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPA 121 (149)
T ss_pred CcccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCC
Confidence 23578999999986 33445556777776666666553
No 425
>PLN02427 UDP-apiose/xylose synthase
Probab=95.09 E-value=0.096 Score=43.93 Aligned_cols=75 Identities=15% Similarity=0.057 Sum_probs=45.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhC-CCEEEEEeCc-ccHHHHHhcCC------CEEEeCCCCccccccCCCCCcccEEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLG-NTHVTASCGA-RNIEFVKSLGA------DEVLDYKTPDGAALKSPSGRKYDAVI 137 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~-g~~v~~~~~~-~~~~~~~~~g~------~~v~~~~~~~~~~~~~~~~~~~d~v~ 137 (240)
...+|||+||+|-+|..+++.+... |.+|+++++. ++.+.+...+. ...+..+-.+...+.... .++|+||
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~-~~~d~Vi 91 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI-KMADLTI 91 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHh-hcCCEEE
Confidence 3457999999999999999888877 5799998854 44443332221 112211111111111111 2589999
Q ss_pred eCCC
Q 045248 138 HCAT 141 (240)
Q Consensus 138 d~~g 141 (240)
.+++
T Consensus 92 HlAa 95 (386)
T PLN02427 92 NLAA 95 (386)
T ss_pred Eccc
Confidence 9996
No 426
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.09 E-value=0.38 Score=38.42 Aligned_cols=94 Identities=21% Similarity=0.157 Sum_probs=65.4
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
..||+.......+ +..++. -.|+++.|+|.+|-+|.-...++...|+.|++.-+. +..+.
T Consensus 137 ~~PcTp~avi~lL-~~~~i~----l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~-------------- 197 (284)
T PRK14179 137 MIPCTPAGIMEMF-REYNVE----LEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAE-------------- 197 (284)
T ss_pred CcCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHH--------------
Confidence 4577776666666 555553 389999999988999999999999999988876322 21110
Q ss_pred CccccccCCCCCcccEEEeCCCCCC-ccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIP-WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~ 164 (240)
.. +..|+|+-++|.+. +.. ..+++|..++.+|..
T Consensus 198 ----~~-----~~ADIVI~avg~~~~v~~--~~ik~GavVIDvgin 232 (284)
T PRK14179 198 ----VA-----RKADILVVAIGRGHFVTK--EFVKEGAVVIDVGMN 232 (284)
T ss_pred ----HH-----hhCCEEEEecCccccCCH--HHccCCcEEEEecce
Confidence 00 34778888888755 333 348888888888754
No 427
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.09 E-value=0.061 Score=43.74 Aligned_cols=42 Identities=29% Similarity=0.323 Sum_probs=36.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV 106 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~ 106 (240)
-.+.+++|+|+++|+|...++-+...|++|+..+++ ++.+.+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~ 75 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEA 75 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence 467899999999999999999999999999999986 444333
No 428
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.07 E-value=0.066 Score=48.22 Aligned_cols=77 Identities=17% Similarity=0.228 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCC-EEE--eCCCCc--cccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGAD-EVL--DYKTPD--GAALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~-~v~--~~~~~~--~~~~~~--~~~~~~ 133 (240)
.+++++|+||+|++|..+++.+...|++|+++.++ ++.+.+ +..+.. .++ |..+.. ...++. ..-.++
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 449 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV 449 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 36789999999999999999888899999999964 443332 223332 222 222211 111111 112369
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.+.|.
T Consensus 450 d~li~~Ag~ 458 (657)
T PRK07201 450 DYLVNNAGR 458 (657)
T ss_pred CEEEECCCC
Confidence 999999983
No 429
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.06 E-value=0.045 Score=45.23 Aligned_cols=46 Identities=22% Similarity=0.153 Sum_probs=37.6
Q ss_pred HHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 48 TAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 48 ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
|||.-+.....+ ..++|||+||+|-+|..++..+...|.+|+++++
T Consensus 2 ~~~~~~~~~~~~------~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~ 47 (348)
T PRK15181 2 TAYEELRTKLVL------APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDN 47 (348)
T ss_pred chhhhhhhcccc------cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 566666444444 5579999999999999999999999999999985
No 430
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.02 E-value=0.44 Score=35.72 Aligned_cols=121 Identities=18% Similarity=0.063 Sum_probs=72.7
Q ss_pred hhhchHHHHHHHHHHhhhCCC---cCC--CCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHHHHhcCCCEE
Q 045248 40 SGLPVAGLTAHQALTQSAGVK---LDG--SGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEV 114 (240)
Q Consensus 40 a~~~~~~~ta~~~l~~~~~~~---~~~--~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~v 114 (240)
..+||+....+..+ +..++. .|. .-.|++++|+|.+.-+|.=+..++...|+.|+.+..+.-..+.+.-.-.+-
T Consensus 31 ~~~PCTp~avi~lL-~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs 109 (197)
T cd01079 31 SILPCTPLAIVKIL-EFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHE 109 (197)
T ss_pred CccCCCHHHHHHHH-HHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccccccccccc
Confidence 35677776777777 444320 000 038999999998889999999999999999997753211111100000000
Q ss_pred EeCCC-Cc-cccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 115 LDYKT-PD-GAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 115 ~~~~~-~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
... .+ ...+.+ .-+..|+|+-++|.+.+.---+.+++|..++.+|..
T Consensus 110 --~t~~~~~~~~l~~-~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~ 158 (197)
T cd01079 110 --KHHVTDEEAMTLD-CLSQSDVVITGVPSPNYKVPTELLKDGAICINFASI 158 (197)
T ss_pred --cccccchhhHHHH-HhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCC
Confidence 000 00 000100 114589999999987653445788999999999864
No 431
>PRK06128 oxidoreductase; Provisional
Probab=95.02 E-value=0.067 Score=43.19 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
.++++||+||+|++|..+++.+...|++|+.+.+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~ 87 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYL 87 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence 5789999999999999999999999999887764
No 432
>PLN02366 spermidine synthase
Probab=95.02 E-value=0.065 Score=43.46 Aligned_cols=96 Identities=21% Similarity=0.246 Sum_probs=54.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHHHhc-CC-CEEEeCC-----CCcc-ccccCCCCCccc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFVKSL-GA-DEVLDYK-----TPDG-AALKSPSGRKYD 134 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~-g~-~~v~~~~-----~~~~-~~~~~~~~~~~d 134 (240)
++.++||++| +|. |..+..+++..+. +|.++.-+ +-.+.+++. .. ...++.. ..+. ..++...++.||
T Consensus 90 ~~pkrVLiIG-gG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 90 PNPKKVLVVG-GGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCeEEEEc-CCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence 4668999999 343 5566777887665 78787744 444555442 11 0011100 0111 112222346799
Q ss_pred EEEeCCCCC-----------CccccccCCCCCcEEEEeC
Q 045248 135 AVIHCATGI-----------PWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 135 ~v~d~~g~~-----------~~~~~~~~l~~~G~iv~~g 162 (240)
+|+--...+ .+..+.++|+++|.++.-.
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 997543221 2567788999999997543
No 433
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=95.01 E-value=0.048 Score=44.36 Aligned_cols=71 Identities=27% Similarity=0.339 Sum_probs=45.0
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEE-eCCCCccccccCCCCCcccEEEeCCCC
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~ 142 (240)
+++|.|++|.+|..+++.+...|.+|+++.+. ++.....+.+...+. |..+. ..+.... .++|+||.+++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~--~~l~~~~-~~~d~vi~~a~~ 74 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDP--ASLRKAV-AGCRALFHVAAD 74 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCH--HHHHHHH-hCCCEEEEecee
Confidence 68999999999999999999999999999964 433333333432221 22221 1111111 357999998863
No 434
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.01 E-value=0.072 Score=41.78 Aligned_cols=77 Identities=21% Similarity=0.183 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCC-EEE--eCCCCc-c-ccccC--CCCCcc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGAD-EVL--DYKTPD-G-AALKS--PSGRKY 133 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~-~v~--~~~~~~-~-~~~~~--~~~~~~ 133 (240)
.+++++|+|++|++|..+++.+...|++|+.+++. ++.+.+ ++.+.. ..+ |..+.+ . ..+.. ..-.++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999888864 333222 333432 222 222221 1 11110 112468
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|+++.+.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999983
No 435
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=95.00 E-value=0.05 Score=43.47 Aligned_cols=32 Identities=31% Similarity=0.331 Sum_probs=28.6
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
+|||.||+|.+|..+++.+...|.+|+++.+.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 48999999999999999999899999988763
No 436
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.98 E-value=0.45 Score=37.96 Aligned_cols=96 Identities=19% Similarity=0.119 Sum_probs=68.8
Q ss_pred hhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC-cccHHHHHhcCCCEEEeCC
Q 045248 40 SGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG-ARNIEFVKSLGADEVLDYK 118 (240)
Q Consensus 40 a~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~v~~~~ 118 (240)
...||+....+..+ +..++. -.|++++|+|.+.-+|.=+..++...|+.|+.+-+ ...++..
T Consensus 136 ~~~PcTp~aii~lL-~~y~i~----l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~------------ 198 (282)
T PRK14180 136 CLESCTPKGIMTML-REYGIK----TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSH------------ 198 (282)
T ss_pred CcCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHH------------
Confidence 35677776666667 555543 38999999999999999999999999998877654 2222211
Q ss_pred CCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 119 TPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 119 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
-+..|+++-++|.+.+ ---+.+++|..++.+|..
T Consensus 199 -----------~k~ADIvIsAvGkp~~-i~~~~vk~gavVIDvGin 232 (282)
T PRK14180 199 -----------TTKADILIVAVGKPNF-ITADMVKEGAVVIDVGIN 232 (282)
T ss_pred -----------hhhcCEEEEccCCcCc-CCHHHcCCCcEEEEeccc
Confidence 0347888888887664 223678888888888853
No 437
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=94.94 E-value=0.059 Score=41.52 Aligned_cols=32 Identities=28% Similarity=0.402 Sum_probs=28.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEe
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNT-HVTASC 98 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~ 98 (240)
+...|+|+| .||+|.+++..+...|+ ++..++
T Consensus 29 ~~~~V~VvG-iGGVGSw~veALaRsGig~itlID 61 (263)
T COG1179 29 KQAHVCVVG-IGGVGSWAVEALARSGIGRITLID 61 (263)
T ss_pred hhCcEEEEe-cCchhHHHHHHHHHcCCCeEEEEe
Confidence 557899999 99999999999999998 776665
No 438
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.93 E-value=0.36 Score=39.53 Aligned_cols=89 Identities=19% Similarity=0.101 Sum_probs=61.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC--
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG-- 142 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-- 142 (240)
-.|+++.|+| .|.||.+..+.++.+|++|+...+..+.+..++.++..+ + .+ ..+ ...|++.-.+..
T Consensus 144 l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~-~---l~-ell-----~~sDii~l~~Plt~ 212 (324)
T COG1052 144 LRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYV-D---LD-ELL-----AESDIISLHCPLTP 212 (324)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceec-c---HH-HHH-----HhCCEEEEeCCCCh
Confidence 4699999999 999999999999999999999997755333344444322 1 11 111 235677666542
Q ss_pred CC----ccccccCCCCCcEEEEeCCC
Q 045248 143 IP----WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 143 ~~----~~~~~~~l~~~G~iv~~g~~ 164 (240)
++ -...+..+++++.+|.++-.
T Consensus 213 ~T~hLin~~~l~~mk~ga~lVNtaRG 238 (324)
T COG1052 213 ETRHLINAEELAKMKPGAILVNTARG 238 (324)
T ss_pred HHhhhcCHHHHHhCCCCeEEEECCCc
Confidence 22 23566789999999988743
No 439
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.91 E-value=0.45 Score=38.06 Aligned_cols=95 Identities=17% Similarity=0.143 Sum_probs=66.8
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
..||+....+..+ +..+++ -.|++++|+|.+.-+|.=+..++...|+.|+...+. ..++..
T Consensus 134 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~------------- 195 (287)
T PRK14173 134 LEPCTPAGVVRLL-KHYGIP----LAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAV------------- 195 (287)
T ss_pred CCCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence 4577766666666 555553 389999999999999999999999999988866542 222211
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
. +..|+++-++|.+.+- --+.+++|..++.+|..
T Consensus 196 -----~-----~~ADIvIsAvGkp~~i-~~~~vk~GavVIDVGin 229 (287)
T PRK14173 196 -----T-----RRADVLVVAVGRPHLI-TPEMVRPGAVVVDVGIN 229 (287)
T ss_pred -----H-----hhCCEEEEecCCcCcc-CHHHcCCCCEEEEccCc
Confidence 0 2367888888876532 34567888888888854
No 440
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=94.89 E-value=0.1 Score=45.67 Aligned_cols=86 Identities=16% Similarity=0.092 Sum_probs=54.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC--
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI-- 143 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-- 143 (240)
.|+++.|+| .|.+|...++.++.+|++|++.++....+...++|...+ +. ...+ ...|+|+-++...
T Consensus 139 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~-~l----~ell-----~~aDiV~l~lP~t~~ 207 (526)
T PRK13581 139 YGKTLGIIG-LGRIGSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELV-SL----DELL-----ARADFITLHTPLTPE 207 (526)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEE-cH----HHHH-----hhCCEEEEccCCChH
Confidence 588999999 999999999999999999999986433334445554322 10 0111 2356666666531
Q ss_pred C---c-cccccCCCCCcEEEEeC
Q 045248 144 P---W-STFEPNLGTNGKVIDIT 162 (240)
Q Consensus 144 ~---~-~~~~~~l~~~G~iv~~g 162 (240)
+ + ...+..++++..++.++
T Consensus 208 t~~li~~~~l~~mk~ga~lIN~a 230 (526)
T PRK13581 208 TRGLIGAEELAKMKPGVRIINCA 230 (526)
T ss_pred hhcCcCHHHHhcCCCCeEEEECC
Confidence 1 1 23455666766666554
No 441
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.87 E-value=0.06 Score=43.66 Aligned_cols=35 Identities=20% Similarity=0.154 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+||++++|.++++.+...|++|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 57899999999999999999999999999988853
No 442
>PRK07832 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.072 Score=42.25 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=47.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHH----HhcCCCE----EEeCCCCc--cccccC--CCCCccc
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFV----KSLGADE----VLDYKTPD--GAALKS--PSGRKYD 134 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~g~~~----v~~~~~~~--~~~~~~--~~~~~~d 134 (240)
++++|+||+|++|..+++.+...|++|+.+.++ ++.+.. +..+... ..|..+.. ...... ....++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 368999999999999999998999999888864 333222 3334321 12333222 111111 1124689
Q ss_pred EEEeCCCC
Q 045248 135 AVIHCATG 142 (240)
Q Consensus 135 ~v~d~~g~ 142 (240)
+++.+.|.
T Consensus 81 ~lv~~ag~ 88 (272)
T PRK07832 81 VVMNIAGI 88 (272)
T ss_pred EEEECCCC
Confidence 99999984
No 443
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=94.86 E-value=0.082 Score=42.68 Aligned_cols=74 Identities=23% Similarity=0.209 Sum_probs=42.5
Q ss_pred eEEEEcCCchHHHHHHHHHHhCC--CEEEEEeCc---ccHHHHHhcC---CCEEEeCCCCccccc-cCCCCCcccEEEeC
Q 045248 69 NILVTAASGGVGHYAVQLAKLGN--THVTASCGA---RNIEFVKSLG---ADEVLDYKTPDGAAL-KSPSGRKYDAVIHC 139 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g--~~v~~~~~~---~~~~~~~~~g---~~~v~~~~~~~~~~~-~~~~~~~~d~v~d~ 139 (240)
+|+|+||+|.+|..+++.+...| .+|++..+. .+.+.+.++. -..++..+-.+...+ +...+.++|+||++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 48999999999999998777666 688887642 2222222221 112222111111111 11122358999999
Q ss_pred CCC
Q 045248 140 ATG 142 (240)
Q Consensus 140 ~g~ 142 (240)
++.
T Consensus 81 a~~ 83 (317)
T TIGR01181 81 AAE 83 (317)
T ss_pred ccc
Confidence 974
No 444
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=94.85 E-value=0.098 Score=42.40 Aligned_cols=31 Identities=26% Similarity=0.260 Sum_probs=27.6
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
+|||+||+|.+|..+++.+...|.+|+++.+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~ 31 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDN 31 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 4899999999999999999989999887764
No 445
>PRK07402 precorrin-6B methylase; Provisional
Probab=94.85 E-value=0.26 Score=37.11 Aligned_cols=101 Identities=13% Similarity=0.167 Sum_probs=55.0
Q ss_pred hhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhC-CCEEEEEeCc-ccHHHH----HhcCCCE--EEeCCCCcccccc
Q 045248 55 QSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLG-NTHVTASCGA-RNIEFV----KSLGADE--VLDYKTPDGAALK 126 (240)
Q Consensus 55 ~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~-g~~v~~~~~~-~~~~~~----~~~g~~~--v~~~~~~~~~~~~ 126 (240)
...++ +++++||=.| .|.|..++.+++.. +.+|++++.+ +..+.+ ++++... ++..+.. ....
T Consensus 34 ~~l~~-----~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~--~~~~ 104 (196)
T PRK07402 34 SQLRL-----EPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAP--ECLA 104 (196)
T ss_pred HhcCC-----CCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchH--HHHh
Confidence 55555 6888887776 33455566666654 4699999964 555444 3455432 2221111 1111
Q ss_pred CCCCCcccEEEeCCCC--CCccccccCCCCCcEEEEeCCC
Q 045248 127 SPSGRKYDAVIHCATG--IPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 127 ~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
......-++.++.... ..+..+.+.|+++|+++.....
T Consensus 105 ~~~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 144 (196)
T PRK07402 105 QLAPAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATASS 144 (196)
T ss_pred hCCCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEeec
Confidence 1111112334443222 2267788899999998877543
No 446
>PLN02240 UDP-glucose 4-epimerase
Probab=94.85 E-value=0.11 Score=42.87 Aligned_cols=34 Identities=26% Similarity=0.267 Sum_probs=30.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
.+++|||.||+|.+|..+++.+...|.+|+++++
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~ 37 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDN 37 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 4688999999999999999988888999998874
No 447
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=94.84 E-value=0.35 Score=39.41 Aligned_cols=94 Identities=15% Similarity=0.094 Sum_probs=58.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHHHHhcCCCEEEeCCCC-ccc---cccC-CCCCcccEEEeCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTP-DGA---ALKS-PSGRKYDAVIHCA 140 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~---~~~~-~~~~~~d~v~d~~ 140 (240)
...+|+|+| +|.+|......+...|.+|..+.++. .+..++.|.. +-..... ... .... .....+|+||-|+
T Consensus 4 ~~m~I~IiG-~GaiG~~lA~~L~~~g~~V~~~~r~~-~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~vilav 80 (313)
T PRK06249 4 ETPRIGIIG-TGAIGGFYGAMLARAGFDVHFLLRSD-YEAVRENGLQ-VDSVHGDFHLPPVQAYRSAEDMPPCDWVLVGL 80 (313)
T ss_pred cCcEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCC-HHHHHhCCeE-EEeCCCCeeecCceEEcchhhcCCCCEEEEEe
Confidence 345899999 99999998888888899999888754 3445555532 1111110 000 0011 1124689999998
Q ss_pred CCCC----ccccccCCCCCcEEEEeC
Q 045248 141 TGIP----WSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 141 g~~~----~~~~~~~l~~~G~iv~~g 162 (240)
-... +......+.+++.++.+-
T Consensus 81 K~~~~~~~~~~l~~~~~~~~~iv~lq 106 (313)
T PRK06249 81 KTTANALLAPLIPQVAAPDAKVLLLQ 106 (313)
T ss_pred cCCChHhHHHHHhhhcCCCCEEEEec
Confidence 6543 334444567788887763
No 448
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.84 E-value=0.49 Score=37.98 Aligned_cols=96 Identities=17% Similarity=0.067 Sum_probs=67.3
Q ss_pred hhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCC
Q 045248 40 SGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYK 118 (240)
Q Consensus 40 a~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~ 118 (240)
..+||+....+..+ +..++. -.|++++|+|.+.-+|.=+..++...++.|+.+.+. ..++..
T Consensus 138 ~~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~------------ 200 (294)
T PRK14187 138 CLIPCTPKGCLYLI-KTITRN----LSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADY------------ 200 (294)
T ss_pred CccCcCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHH------------
Confidence 34577766666666 555553 389999999988899999999999999998877652 222211
Q ss_pred CCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 119 TPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 119 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
-+..|+++-++|.+.+ ---+.+++|..++.+|..
T Consensus 201 -----------~~~ADIvVsAvGkp~~-i~~~~ik~gaiVIDVGin 234 (294)
T PRK14187 201 -----------CSKADILVAAVGIPNF-VKYSWIKKGAIVIDVGIN 234 (294)
T ss_pred -----------HhhCCEEEEccCCcCc-cCHHHcCCCCEEEEeccc
Confidence 0346788888886553 223567788888888753
No 449
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.82 E-value=0.11 Score=44.51 Aligned_cols=69 Identities=19% Similarity=0.180 Sum_probs=46.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc--cH----HHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR--NI----EFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHC 139 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~--~~----~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 139 (240)
.+++++|+| +|++|+.++..+...|++|++++... .. +.+++.|.. ++.....+ . ...++|+|+-+
T Consensus 4 ~~k~v~iiG-~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~~~-~-----~~~~~d~vv~~ 75 (450)
T PRK14106 4 KGKKVLVVG-AGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIE-LVLGEYPE-E-----FLEGVDLVVVS 75 (450)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCcch-h-----HhhcCCEEEEC
Confidence 578999999 67799999999999999999988642 22 333455543 32222111 1 12468999999
Q ss_pred CCC
Q 045248 140 ATG 142 (240)
Q Consensus 140 ~g~ 142 (240)
.|.
T Consensus 76 ~g~ 78 (450)
T PRK14106 76 PGV 78 (450)
T ss_pred CCC
Confidence 884
No 450
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.80 E-value=0.44 Score=37.96 Aligned_cols=95 Identities=19% Similarity=0.140 Sum_probs=66.1
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
..|++....+..+ +..++. -.|++++|+|.+..+|.-+..++...|+.|....+. ..++..
T Consensus 131 ~~PcTp~av~~ll-~~~~i~----l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~------------- 192 (279)
T PRK14178 131 FAPCTPNGIMTLL-HEYKIS----IAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAE------------- 192 (279)
T ss_pred CCCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHH-------------
Confidence 4577766666666 555553 389999999977799999999999999988887753 211111
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
. +..|+++-++|.+.+ -.-+.+++|..++.+|..
T Consensus 193 -----~-----~~ADIvI~Avgk~~l-v~~~~vk~GavVIDVgi~ 226 (279)
T PRK14178 193 -----L-----RQADILVSAAGKAGF-ITPDMVKPGATVIDVGIN 226 (279)
T ss_pred -----H-----hhCCEEEECCCcccc-cCHHHcCCCcEEEEeecc
Confidence 0 347888888885432 122347889899888854
No 451
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.79 E-value=0.55 Score=37.51 Aligned_cols=96 Identities=17% Similarity=0.161 Sum_probs=67.4
Q ss_pred hhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCC
Q 045248 40 SGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYK 118 (240)
Q Consensus 40 a~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~ 118 (240)
...||+....+..+ +..++. -.|++++|+|.+.-+|.=+..++...++.|+.+-+. ..++..
T Consensus 135 ~~~PcTp~avi~lL-~~y~i~----l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~------------ 197 (282)
T PRK14166 135 GFLPCTPLGVMKLL-KAYEID----LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLY------------ 197 (282)
T ss_pred CCcCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH------------
Confidence 34677776666666 555553 389999999988899999999999899988866542 222211
Q ss_pred CCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 119 TPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 119 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
-+..|+++-++|.+.+ -.-+.+++|..++.+|..
T Consensus 198 -----------~~~ADIvIsAvGkp~~-i~~~~vk~GavVIDvGin 231 (282)
T PRK14166 198 -----------TRQADLIIVAAGCVNL-LRSDMVKEGVIVVDVGIN 231 (282)
T ss_pred -----------HhhCCEEEEcCCCcCc-cCHHHcCCCCEEEEeccc
Confidence 0347788888887653 223578888888888853
No 452
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=94.78 E-value=0.34 Score=31.16 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=26.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~ 99 (240)
.+++++|+| +|.+|..+.+.+...+. ++....+
T Consensus 22 ~~~~v~i~G-~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 22 KGKTVVVLG-AGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 678999999 79999999999988854 6655544
No 453
>PLN02583 cinnamoyl-CoA reductase
Probab=94.78 E-value=0.073 Score=42.95 Aligned_cols=36 Identities=28% Similarity=0.256 Sum_probs=32.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.++++|||+||+|.+|..+++.+...|++|+++.++
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~ 39 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK 39 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 467899999999999999999999999999998863
No 454
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.77 E-value=0.52 Score=37.65 Aligned_cols=95 Identities=19% Similarity=0.186 Sum_probs=66.4
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
.+||+....+..+ +..+++ -.|++++|+|.+.-+|.=+..++...|+.|+..-+. ..++..
T Consensus 136 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~------------- 197 (284)
T PRK14170 136 FVPCTPAGIIELI-KSTGTQ----IEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQV------------- 197 (284)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence 4577766666666 555553 389999999988899999999999999988866542 222111
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
. +..|+++-++|.+.+ ---+.+++|..++.+|..
T Consensus 198 -----~-----~~ADIvI~AvG~~~~-i~~~~vk~GavVIDvGin 231 (284)
T PRK14170 198 -----A-----KEADILVVATGLAKF-VKKDYIKPGAIVIDVGMD 231 (284)
T ss_pred -----H-----hhCCEEEEecCCcCc-cCHHHcCCCCEEEEccCc
Confidence 0 236788888886553 223567888888888854
No 455
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=94.77 E-value=0.017 Score=46.43 Aligned_cols=93 Identities=18% Similarity=0.072 Sum_probs=53.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHH----HhcCCC-EEEeCCCCccccccCCCCCcccEEE
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFV----KSLGAD-EVLDYKTPDGAALKSPSGRKYDAVI 137 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~d~v~ 137 (240)
.++++||=+| .|.|.+++..++ +|+ +|++++-+ ...+.+ +..|.. .+.-... ......+||+|+
T Consensus 160 ~~g~~vLDvG--~GSGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~------~~~~~~~~dlvv 230 (295)
T PF06325_consen 160 KPGKRVLDVG--CGSGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLS------EDLVEGKFDLVV 230 (295)
T ss_dssp STTSEEEEES---TTSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCT------SCTCCS-EEEEE
T ss_pred cCCCEEEEeC--CcHHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEe------cccccccCCEEE
Confidence 6889998887 335655555555 588 89999953 333333 334422 2211111 111227799999
Q ss_pred eCCCCCC----ccccccCCCCCcEEEEeCCCch
Q 045248 138 HCATGIP----WSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 138 d~~g~~~----~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
-.+-... +....+.++++|.+++.|....
T Consensus 231 ANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 231 ANILADVLLELAPDIASLLKPGGYLILSGILEE 263 (295)
T ss_dssp EES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred ECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence 7665432 4455667899999999886543
No 456
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.77 E-value=0.044 Score=41.38 Aligned_cols=91 Identities=15% Similarity=0.070 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH----hcCCCEEEeCCCCccccccCCCCCcccEEEeC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVIHC 139 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 139 (240)
.++.+||-.| .|.|..+..+++ .|.+|++++.+ ...+.++ +.+.. +.....+..... -...+|+|+.+
T Consensus 29 ~~~~~vLDiG--cG~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~d~~~~~--~~~~fD~I~~~ 101 (195)
T TIGR00477 29 VAPCKTLDLG--CGQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAYDINAAA--LNEDYDFIFST 101 (195)
T ss_pred CCCCcEEEeC--CCCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEeccchhcc--ccCCCCEEEEe
Confidence 4557888888 356777777776 58899999954 4444442 23322 111111100001 12469999865
Q ss_pred CC-----C----CCccccccCCCCCcEEEEeC
Q 045248 140 AT-----G----IPWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 140 ~g-----~----~~~~~~~~~l~~~G~iv~~g 162 (240)
.- . ..+..+.+.|+++|.++.+.
T Consensus 102 ~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~ 133 (195)
T TIGR00477 102 VVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA 133 (195)
T ss_pred cccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 32 1 13667778899999965553
No 457
>PRK07574 formate dehydrogenase; Provisional
Probab=94.76 E-value=0.13 Score=43.08 Aligned_cols=88 Identities=11% Similarity=0.108 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcc-cHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGAR-NIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP 144 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 144 (240)
.|++|.|+| .|.+|....+.++.+|.+|++..+.. ..+..+.+|... .... ...+ ...|+|+-++....
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~---~~~l-~ell-----~~aDvV~l~lPlt~ 260 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTY---HVSF-DSLV-----SVCDVVTIHCPLHP 260 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCcee---cCCH-HHHh-----hcCCEEEEcCCCCH
Confidence 678999999 99999999999999999999998653 334344455321 1110 1111 24678877776311
Q ss_pred -----c-cccccCCCCCcEEEEeCC
Q 045248 145 -----W-STFEPNLGTNGKVIDITP 163 (240)
Q Consensus 145 -----~-~~~~~~l~~~G~iv~~g~ 163 (240)
+ ...+..++++..++.++-
T Consensus 261 ~T~~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 261 ETEHLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred HHHHHhCHHHHhcCCCCcEEEECCC
Confidence 1 245667788877777753
No 458
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.75 E-value=0.37 Score=39.09 Aligned_cols=90 Identities=11% Similarity=-0.025 Sum_probs=57.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHH-hCCC-EEEEEeCc-cc-HHHHHhcCCC--EEEeCCCCccccccCCCCCcccEEEe
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAK-LGNT-HVTASCGA-RN-IEFVKSLGAD--EVLDYKTPDGAALKSPSGRKYDAVIH 138 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~-~~g~-~v~~~~~~-~~-~~~~~~~g~~--~v~~~~~~~~~~~~~~~~~~~d~v~d 138 (240)
....+++|+| +|..|.+.++.+. .++. +|.+..++ ++ .+++++++.. .+. ..+ ....+ .+.|+|+.
T Consensus 123 ~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~~~-~~~av-----~~aDiVit 194 (304)
T PRK07340 123 APPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-PLD-GEAIP-----EAVDLVVT 194 (304)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-ECC-HHHHh-----hcCCEEEE
Confidence 4678999999 8999999888776 5777 56666654 44 3444555321 111 111 01112 36999999
Q ss_pred CCCCCC-ccccccCCCCCcEEEEeCCC
Q 045248 139 CATGIP-WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 139 ~~g~~~-~~~~~~~l~~~G~iv~~g~~ 164 (240)
|+.+.. +-.. .+++|-++..+|..
T Consensus 195 aT~s~~Pl~~~--~~~~g~hi~~iGs~ 219 (304)
T PRK07340 195 ATTSRTPVYPE--AARAGRLVVAVGAF 219 (304)
T ss_pred ccCCCCceeCc--cCCCCCEEEecCCC
Confidence 998633 3333 37899999999954
No 459
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.75 E-value=0.083 Score=41.07 Aligned_cols=33 Identities=12% Similarity=0.190 Sum_probs=29.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
++++|.||+|++|...++.+...|++|+++.++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARD 34 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 579999999999999999888899999999864
No 460
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=94.75 E-value=0.16 Score=42.51 Aligned_cols=36 Identities=25% Similarity=0.286 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.....|+|.||+|.+|+..++.++.+|+.|.+..++
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd 112 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRD 112 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccC
Confidence 566789999999999999999999999999999986
No 461
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.74 E-value=0.041 Score=38.26 Aligned_cols=89 Identities=13% Similarity=0.018 Sum_probs=48.3
Q ss_pred eEEEEcCCchHHHHHHHHHHh-CCCEEEEEe-Cccc----HHHHHhcC--CCEEEeCCCCccccccCCCCCcccEEEeCC
Q 045248 69 NILVTAASGGVGHYAVQLAKL-GNTHVTASC-GARN----IEFVKSLG--ADEVLDYKTPDGAALKSPSGRKYDAVIHCA 140 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~-~g~~v~~~~-~~~~----~~~~~~~g--~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~ 140 (240)
+|.|+|.+|-+|..+++.+.. .+.++.+.. +..+ .+..+-.| ...+..+. .++... ..+|++||++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~-----~l~~~~-~~~DVvIDfT 75 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTD-----DLEELL-EEADVVIDFT 75 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS------HHHHT-TH-SEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccch-----hHHHhc-ccCCEEEEcC
Confidence 689999779999999999997 666877666 3321 11111111 11111111 111111 2289999999
Q ss_pred CCCCccccccCCCCCcEEEEeCC
Q 045248 141 TGIPWSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 141 g~~~~~~~~~~l~~~G~iv~~g~ 163 (240)
..+.....++.+...|.-+.+|.
T Consensus 76 ~p~~~~~~~~~~~~~g~~~ViGT 98 (124)
T PF01113_consen 76 NPDAVYDNLEYALKHGVPLVIGT 98 (124)
T ss_dssp -HHHHHHHHHHHHHHT-EEEEE-
T ss_pred ChHHhHHHHHHHHhCCCCEEEEC
Confidence 65555555555555576666654
No 462
>PLN02244 tocopherol O-methyltransferase
Probab=94.73 E-value=0.082 Score=43.60 Aligned_cols=95 Identities=16% Similarity=0.204 Sum_probs=57.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHH----hcCCCEEEeCCCCccccccCCCCCcccEEEeC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVIHC 139 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~ 139 (240)
+++++||=+| + |.|..+..+++..|++|++++.+ ...+.++ +.|...-+.....+.... ....+.||+|+-.
T Consensus 117 ~~~~~VLDiG-C-G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~-~~~~~~FD~V~s~ 193 (340)
T PLN02244 117 KRPKRIVDVG-C-GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQ-PFEDGQFDLVWSM 193 (340)
T ss_pred CCCCeEEEec-C-CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccC-CCCCCCccEEEEC
Confidence 4678898887 3 45667778888889999999954 4444443 334321111111111111 1123579999864
Q ss_pred CCC-------CCccccccCCCCCcEEEEeC
Q 045248 140 ATG-------IPWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 140 ~g~-------~~~~~~~~~l~~~G~iv~~g 162 (240)
-.. ..+..+.+.|+|||+++...
T Consensus 194 ~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 194 ESGEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred CchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 331 12567788999999998764
No 463
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.71 E-value=0.11 Score=46.35 Aligned_cols=93 Identities=10% Similarity=0.120 Sum_probs=67.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC-
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP- 144 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~- 144 (240)
.+.++|.| .|.+|...++.++..|.++++++.+ ++.+.+++.|.. ++.-+..+....+..+-+..|.++-+.+++.
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~-v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~ 477 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYK-VYYGDATQLELLRAAGAEKAEAIVITCNEPED 477 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCe-EEEeeCCCHHHHHhcCCccCCEEEEEeCCHHH
Confidence 46899999 9999999999999999999999975 788889998864 4433333344455555567899999998743
Q ss_pred ---ccccccCCCCCcEEEEe
Q 045248 145 ---WSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 145 ---~~~~~~~l~~~G~iv~~ 161 (240)
.-...+...|.-+++.-
T Consensus 478 n~~i~~~~r~~~p~~~IiaR 497 (601)
T PRK03659 478 TMKIVELCQQHFPHLHILAR 497 (601)
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 11234445666666644
No 464
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.71 E-value=0.097 Score=41.21 Aligned_cols=34 Identities=12% Similarity=0.278 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
.+++++|+||++++|..++..+...|++|+.+.+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~ 40 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN 40 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 6789999999999999999988899999887764
No 465
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=94.71 E-value=0.16 Score=37.74 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=27.2
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNT-HVTASCGA 100 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~ 100 (240)
++||+|+.|++|..+++.+...|. +++.+.++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~ 34 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRS 34 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccC
Confidence 589999999999999988888877 88888854
No 466
>PLN03075 nicotianamine synthase; Provisional
Probab=94.70 E-value=0.2 Score=40.29 Aligned_cols=96 Identities=16% Similarity=0.141 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCC--CEEEEEeCc-ccHHHHHhc-----CCCEEEeCCCCccccccCCCCCcccEE
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGN--THVTASCGA-RNIEFVKSL-----GADEVLDYKTPDGAALKSPSGRKYDAV 136 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g--~~v~~~~~~-~~~~~~~~~-----g~~~v~~~~~~~~~~~~~~~~~~~d~v 136 (240)
.+.++|+-+| +|+.|+.++-+++.+. .+++.++.+ +..+.+++. |...-+.+...+.... .....+||+|
T Consensus 122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~-~~~l~~FDlV 199 (296)
T PLN03075 122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDV-TESLKEYDVV 199 (296)
T ss_pred CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhc-ccccCCcCEE
Confidence 3668999999 9999988887776443 489999964 555555533 2222122222221111 1113579999
Q ss_pred EeCC------CC--CCccccccCCCCCcEEEEeC
Q 045248 137 IHCA------TG--IPWSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 137 ~d~~------g~--~~~~~~~~~l~~~G~iv~~g 162 (240)
+-.+ .. ..++...+.|++||.++.-.
T Consensus 200 F~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 200 FLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 8775 11 12778888999999987654
No 467
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=94.70 E-value=0.19 Score=40.34 Aligned_cols=58 Identities=17% Similarity=0.209 Sum_probs=45.9
Q ss_pred hhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC---c-ccHHHHHhcCCCEEEeCC
Q 045248 55 QSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG---A-RNIEFVKSLGADEVLDYK 118 (240)
Q Consensus 55 ~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~---~-~~~~~~~~~g~~~v~~~~ 118 (240)
....+ ++|. .+|-+.+|+.|.++..+++.+|++++.+.+ + ++.+.++.+|+..++...
T Consensus 55 ~~G~l-----~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLL-----KPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCC-----CCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 44556 7888 557777999999999999999998777774 2 688899999997666544
No 468
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.68 E-value=0.12 Score=46.36 Aligned_cols=92 Identities=15% Similarity=0.163 Sum_probs=65.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC-
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP- 144 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~- 144 (240)
.++|+|.| .|.+|+...+.++..|.++++++.+ ++.+.+++.|.. ++.-+..+...++..+-+.+|.++-+++++.
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~-v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~ 477 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMK-VFYGDATRMDLLESAGAAKAEVLINAIDDPQT 477 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCe-EEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHH
Confidence 47899999 9999999999999999999999965 788889888864 4433333334445555567899998888633
Q ss_pred ---ccccccCCCCCcEEEE
Q 045248 145 ---WSTFEPNLGTNGKVID 160 (240)
Q Consensus 145 ---~~~~~~~l~~~G~iv~ 160 (240)
.-...+.+.|+-+++.
T Consensus 478 n~~i~~~ar~~~p~~~iia 496 (621)
T PRK03562 478 SLQLVELVKEHFPHLQIIA 496 (621)
T ss_pred HHHHHHHHHHhCCCCeEEE
Confidence 2233344455655543
No 469
>PRK06123 short chain dehydrogenase; Provisional
Probab=94.67 E-value=0.15 Score=39.62 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=27.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEe
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASC 98 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~ 98 (240)
++++||+|++|++|..+++.+...|++|+...
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~ 33 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNY 33 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEec
Confidence 45799999999999999988888999877665
No 470
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=94.66 E-value=0.12 Score=42.64 Aligned_cols=73 Identities=11% Similarity=0.068 Sum_probs=42.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHhC-CCEEEEEeCc-ccHHHHHhcCCCEEEeCCCC-ccccccCCCCCcccEEEeCCC
Q 045248 68 KNILVTAASGGVGHYAVQLAKLG-NTHVTASCGA-RNIEFVKSLGADEVLDYKTP-DGAALKSPSGRKYDAVIHCAT 141 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~-g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~~~~~d~v~d~~g 141 (240)
.+|||+||+|-+|..+++.+... |.+|+++++. ++...+........+..+-. +...+... -.++|+||.+++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~~d~ViH~aa 77 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYH-VKKCDVILPLVA 77 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHH-HcCCCEEEECcc
Confidence 36999999999999999888765 6899999864 33222211111122222111 11111111 136899999875
No 471
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.66 E-value=1.4 Score=35.38 Aligned_cols=37 Identities=11% Similarity=0.062 Sum_probs=30.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHH
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEF 105 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~ 105 (240)
.+|.|+| +|.+|....+.+...|.+|+..+.+ +..+.
T Consensus 6 ~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVG-AGQMGAGIAEVCARAGVDVLVFETTEELATA 43 (286)
T ss_pred cEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 4799999 8999999888888889999999854 54443
No 472
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.66 E-value=0.21 Score=39.31 Aligned_cols=89 Identities=12% Similarity=0.076 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhC-CCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCC-
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLG-NTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCAT- 141 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~-g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g- 141 (240)
.++.+||=+| +| .|..+..+++.. +.+|++++.+ .-.+.+++.+.+. +..+ .... .....||+|+-...
T Consensus 28 ~~~~~vLDlG-cG-~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~-~~~d---~~~~--~~~~~fD~v~~~~~l 99 (255)
T PRK14103 28 ERARRVVDLG-CG-PGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDA-RTGD---VRDW--KPKPDTDVVVSNAAL 99 (255)
T ss_pred CCCCEEEEEc-CC-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcE-EEcC---hhhC--CCCCCceEEEEehhh
Confidence 6788998888 44 367777787765 5699999964 5666676655432 2111 1111 12357999987553
Q ss_pred ----C--CCccccccCCCCCcEEEEe
Q 045248 142 ----G--IPWSTFEPNLGTNGKVIDI 161 (240)
Q Consensus 142 ----~--~~~~~~~~~l~~~G~iv~~ 161 (240)
. ..+..+.+.|+|||.++..
T Consensus 100 ~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 100 QWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred hhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 1 1266788889999998765
No 473
>PLN00203 glutamyl-tRNA reductase
Probab=94.66 E-value=0.27 Score=42.90 Aligned_cols=71 Identities=11% Similarity=0.118 Sum_probs=47.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-ccHHHH-HhcC-CC-EEEeCCCCccccccCCCCCcccEEEeCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-RNIEFV-KSLG-AD-EVLDYKTPDGAALKSPSGRKYDAVIHCA 140 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~~~~~~-~~~g-~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~ 140 (240)
.+.+|+|+| +|.+|.++++.+...|+ +|+++.++ ++.+.+ .+++ .. .+....+. ...+ .+.|+||.++
T Consensus 265 ~~kkVlVIG-AG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl-~~al-----~~aDVVIsAT 337 (519)
T PLN00203 265 ASARVLVIG-AGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEM-LACA-----AEADVVFTST 337 (519)
T ss_pred CCCEEEEEe-CHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhH-HHHH-----hcCCEEEEcc
Confidence 478999999 79999999999999998 78888865 554444 4553 22 11111110 1111 4589999999
Q ss_pred CCC
Q 045248 141 TGI 143 (240)
Q Consensus 141 g~~ 143 (240)
+..
T Consensus 338 ~s~ 340 (519)
T PLN00203 338 SSE 340 (519)
T ss_pred CCC
Confidence 853
No 474
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.62 E-value=0.052 Score=37.50 Aligned_cols=90 Identities=20% Similarity=0.162 Sum_probs=51.7
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCC-EEEEEeC-cc--cHHHHHhcC---CCEEEeCCCCccccccCCCCCcccEEEeCCC
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNT-HVTASCG-AR--NIEFVKSLG---ADEVLDYKTPDGAALKSPSGRKYDAVIHCAT 141 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~-~~--~~~~~~~~g---~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g 141 (240)
+|.|+||+|-+|..+++++..+-. +++.+.+ +. ...+...++ -..-+...+.+...+ .++|+||.|++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~Dvvf~a~~ 75 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEEL-----SDVDVVFLALP 75 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHH-----TTESEEEE-SC
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHh-----hcCCEEEecCc
Confidence 589999999999999999887654 7666663 32 122222222 001111111111111 57999999998
Q ss_pred CCC-ccccccCCCCCcEEEEeCC
Q 045248 142 GIP-WSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 142 ~~~-~~~~~~~l~~~G~iv~~g~ 163 (240)
... .+..-..++++-+++..+.
T Consensus 76 ~~~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 76 HGASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp HHHHHHHHHHHHHTTSEEEESSS
T ss_pred hhHHHHHHHHHhhCCcEEEeCCH
Confidence 754 3333334566668887764
No 475
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=94.62 E-value=0.033 Score=44.74 Aligned_cols=32 Identities=31% Similarity=0.310 Sum_probs=29.1
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
+|||+|++|-+|.++.+.++..|.+|+.+.+.
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~ 33 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS 33 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch
Confidence 69999999999999999999999999998644
No 476
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.60 E-value=0.13 Score=40.46 Aligned_cols=34 Identities=15% Similarity=0.082 Sum_probs=29.2
Q ss_pred CCCeEEEEcCC--chHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAAS--GGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~--g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
.+++++|+|++ +++|.++++.+...|++|+.+.+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~ 40 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYL 40 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEec
Confidence 57899999975 79999999998899999887753
No 477
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.59 E-value=0.1 Score=41.13 Aligned_cols=77 Identities=22% Similarity=0.221 Sum_probs=47.8
Q ss_pred CCCeEEEEcC--CchHHHHHHHHHHhCCCEEEEEeCcc---cHHHH-HhcCCC-EEE--eCCCCc--cccccC--CCCCc
Q 045248 66 QQKNILVTAA--SGGVGHYAVQLAKLGNTHVTASCGAR---NIEFV-KSLGAD-EVL--DYKTPD--GAALKS--PSGRK 132 (240)
Q Consensus 66 ~g~~vlV~G~--~g~vG~~~~~~a~~~g~~v~~~~~~~---~~~~~-~~~g~~-~v~--~~~~~~--~~~~~~--~~~~~ 132 (240)
.+++++|+|+ ++++|.++++.+...|++|+.+.+++ ..+.+ ++++.. ..+ |..+.. ...++. ....+
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 78999999998889999999887542 22322 334421 122 222221 111111 11246
Q ss_pred ccEEEeCCCC
Q 045248 133 YDAVIHCATG 142 (240)
Q Consensus 133 ~d~v~d~~g~ 142 (240)
+|+++.++|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999999873
No 478
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=94.58 E-value=0.16 Score=40.32 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=29.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~ 99 (240)
.+.+|+|+| .|++|..++..+...|. +++.++.
T Consensus 29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~ 62 (268)
T PRK15116 29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDM 62 (268)
T ss_pred cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeC
Confidence 567899999 99999999999999997 7777774
No 479
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.58 E-value=0.64 Score=37.43 Aligned_cols=95 Identities=16% Similarity=0.081 Sum_probs=65.1
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
..||+....+..+ +..++. -.|++++|+|.+.-+|.=+..++...|+.|+.+.+. ..++..
T Consensus 137 ~~PcTp~aii~lL-~~~~i~----l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~------------- 198 (297)
T PRK14186 137 LRSCTPAGVMRLL-RSQQID----IAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASI------------- 198 (297)
T ss_pred CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence 4577766666666 555553 389999999999999999999999999988777543 222211
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
. +..|+++-++|.+.+ ---+.+++|..++.+|..
T Consensus 199 -----~-----~~ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin 232 (297)
T PRK14186 199 -----T-----READILVAAAGRPNL-IGAEMVKPGAVVVDVGIH 232 (297)
T ss_pred -----H-----hhCCEEEEccCCcCc-cCHHHcCCCCEEEEeccc
Confidence 0 236777777776543 223567788777777753
No 480
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.57 E-value=0.36 Score=38.83 Aligned_cols=34 Identities=9% Similarity=0.133 Sum_probs=28.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~ 100 (240)
++++++|+| +||.+.+++..+...|+ +++++.++
T Consensus 123 ~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt 157 (288)
T PRK12749 123 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRR 157 (288)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 668999999 78889988877778898 78787775
No 481
>PRK10637 cysG siroheme synthase; Provisional
Probab=94.57 E-value=0.17 Score=43.48 Aligned_cols=92 Identities=11% Similarity=0.086 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc--ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA--RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGI 143 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~--~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 143 (240)
.+.+|||+| +|.++.-=++.+...|++|++++++ +....+.+.|....+. ++.....+ .++++||-+++.+
T Consensus 11 ~~~~vlvvG-gG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~-~~~~~~dl-----~~~~lv~~at~d~ 83 (457)
T PRK10637 11 RDRDCLLVG-GGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVE-GPFDESLL-----DTCWLAIAATDDD 83 (457)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChHHh-----CCCEEEEECCCCH
Confidence 789999999 8999988777777899999988864 3444444444322221 22111112 4688999998875
Q ss_pred Ccc-ccccCCCCCcEEEEeCCC
Q 045248 144 PWS-TFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 144 ~~~-~~~~~l~~~G~iv~~g~~ 164 (240)
.++ +..+..+..|.++.....
T Consensus 84 ~~n~~i~~~a~~~~~lvN~~d~ 105 (457)
T PRK10637 84 AVNQRVSEAAEARRIFCNVVDA 105 (457)
T ss_pred HHhHHHHHHHHHcCcEEEECCC
Confidence 544 344444556777665543
No 482
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.57 E-value=0.64 Score=37.08 Aligned_cols=95 Identities=22% Similarity=0.151 Sum_probs=64.9
Q ss_pred hhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCC
Q 045248 41 GLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKT 119 (240)
Q Consensus 41 ~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~ 119 (240)
..||+....+..+ +..++. -.|++++|+|.+.-+|.=...++...|+.|+..-+. ..++..
T Consensus 136 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~------------- 197 (281)
T PRK14183 136 FVPCTPLGVMELL-EEYEID----VKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAH------------- 197 (281)
T ss_pred CCCCcHHHHHHHH-HHcCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHH-------------
Confidence 4577766666666 555553 389999999988899999999999999988744332 222110
Q ss_pred CccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 120 PDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 120 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
-+..|+++-++|.+.+ ---+.+++|..++.+|..
T Consensus 198 ----------~~~ADIvV~AvGkp~~-i~~~~vk~gavvIDvGin 231 (281)
T PRK14183 198 ----------TKKADIVIVGVGKPNL-ITEDMVKEGAIVIDIGIN 231 (281)
T ss_pred ----------HhhCCEEEEecCcccc-cCHHHcCCCcEEEEeecc
Confidence 0347788888886553 224567888888888743
No 483
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=94.56 E-value=0.19 Score=43.01 Aligned_cols=36 Identities=22% Similarity=0.114 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+..+|||+||+|-+|..++..+...|.+|+++++.
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 456899999999999999999999999999999863
No 484
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.55 E-value=0.088 Score=41.53 Aligned_cols=35 Identities=29% Similarity=0.246 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.+++++|+|++|++|.++++.+...|++|+.+.++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~ 42 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH 42 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999999999988854
No 485
>PLN02256 arogenate dehydrogenase
Probab=94.53 E-value=0.36 Score=39.13 Aligned_cols=90 Identities=14% Similarity=0.235 Sum_probs=58.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCcccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP 144 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 144 (240)
..+.+|.|+| .|.+|......++..|.+|++.+++...+.++++|... ..+. .... ....|+|+-|+....
T Consensus 34 ~~~~kI~IIG-~G~mG~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~---~~~~-~e~~----~~~aDvVilavp~~~ 104 (304)
T PLN02256 34 SRKLKIGIVG-FGNFGQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSF---FRDP-DDFC----EEHPDVVLLCTSILS 104 (304)
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECccHHHHHHHcCCee---eCCH-HHHh----hCCCCEEEEecCHHH
Confidence 5677899999 89999999998888898999888664445666777532 1111 1111 124789988887543
Q ss_pred ccccc-----cCCCCCcEEEEeCC
Q 045248 145 WSTFE-----PNLGTNGKVIDITP 163 (240)
Q Consensus 145 ~~~~~-----~~l~~~G~iv~~g~ 163 (240)
+...+ ..++++..++.++.
T Consensus 105 ~~~vl~~l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 105 TEAVLRSLPLQRLKRSTLFVDVLS 128 (304)
T ss_pred HHHHHHhhhhhccCCCCEEEecCC
Confidence 33322 33556666777765
No 486
>PRK08655 prephenate dehydrogenase; Provisional
Probab=94.52 E-value=0.16 Score=43.50 Aligned_cols=86 Identities=20% Similarity=0.292 Sum_probs=54.5
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-cc-HHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC--
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RN-IEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP-- 144 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-- 144 (240)
+|.|+||.|.+|.+++..++..|.+|++.+++ ++ .+.+.++|.. .. .+ ....+ ...|+|+-|+....
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-~~--~~-~~e~~-----~~aDvVIlavp~~~~~ 72 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-YA--ND-NIDAA-----KDADIVIISVPINVTE 72 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-ec--cC-HHHHh-----ccCCEEEEecCHHHHH
Confidence 58899878999999999999999999888865 44 3555667752 11 11 01111 23677777776432
Q ss_pred --ccccccCCCCCcEEEEeCC
Q 045248 145 --WSTFEPNLGTNGKVIDITP 163 (240)
Q Consensus 145 --~~~~~~~l~~~G~iv~~g~ 163 (240)
+......++++..++.++.
T Consensus 73 ~vl~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 73 DVIKEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHHHHhhCCCCCEEEEccc
Confidence 3333444556666666664
No 487
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=94.52 E-value=0.67 Score=37.34 Aligned_cols=96 Identities=22% Similarity=0.163 Sum_probs=67.5
Q ss_pred hhhchHHHHHHHHHHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCC
Q 045248 40 SGLPVAGLTAHQALTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYK 118 (240)
Q Consensus 40 a~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~ 118 (240)
..+||+....+..+ +..++. -.|++++|+|-+.-+|.=+..++...|+.|+.+-+. ..++..
T Consensus 145 ~~~PcTp~avi~lL-~~~~i~----l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~------------ 207 (299)
T PLN02516 145 LFLPCTPKGCLELL-SRSGIP----IKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESI------------ 207 (299)
T ss_pred CCCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH------------
Confidence 35688777777677 555553 379999999988899999999999999988887643 222211
Q ss_pred CCccccccCCCCCcccEEEeCCCCCCccccccCCCCCcEEEEeCCC
Q 045248 119 TPDGAALKSPSGRKYDAVIHCATGIPWSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 119 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~iv~~g~~ 164 (240)
. +..|+++-++|.+.+ ---+.+++|..++.+|..
T Consensus 208 ------~-----~~ADIvv~AvGk~~~-i~~~~vk~gavVIDvGin 241 (299)
T PLN02516 208 ------V-----READIVIAAAGQAMM-IKGDWIKPGAAVIDVGTN 241 (299)
T ss_pred ------H-----hhCCEEEEcCCCcCc-cCHHHcCCCCEEEEeecc
Confidence 0 346788888876432 224568888888888854
No 488
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.52 E-value=0.18 Score=44.62 Aligned_cols=74 Identities=9% Similarity=0.056 Sum_probs=54.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCC
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 142 (240)
.+.++|.| .|.+|...++.++..|.++++++.+ ++.+.+++.|...++ -+..+....++.+-+.+|.++=++++
T Consensus 417 ~~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~-GD~~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 417 CNHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVL-GNAANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEE-cCCCCHHHHHhcCccccCEEEEEcCC
Confidence 37889999 9999999999999999999999975 788888888865443 33333333444444567877766654
No 489
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.49 E-value=0.052 Score=42.44 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=61.2
Q ss_pred HHhhhCCCcCCCCCCCeEEEEcCCchHHHHHHHHHHhCCC--EEEEEe-CcccHHHH----HhcCCCEE--EeCCCCccc
Q 045248 53 LTQSAGVKLDGSGQQKNILVTAASGGVGHYAVQLAKLGNT--HVTASC-GARNIEFV----KSLGADEV--LDYKTPDGA 123 (240)
Q Consensus 53 l~~~~~~~~~~~~~g~~vlV~G~~g~vG~~~~~~a~~~g~--~v~~~~-~~~~~~~~----~~~g~~~v--~~~~~~~~~ 123 (240)
+...+++ .||++|+=.| .|.|.+...+++..|- +|+... ++++.+.+ +..|.... +...+-...
T Consensus 32 I~~~l~i-----~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~ 104 (247)
T PF08704_consen 32 ILMRLDI-----RPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEE 104 (247)
T ss_dssp HHHHTT-------TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG
T ss_pred HHHHcCC-----CCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecc
Confidence 3356777 8999998877 3456667777776653 999999 45665555 45665322 211211111
Q ss_pred cccCCCCCcccEEEeCCCC--CCccccccCC-CCCcEEEEeCCCch
Q 045248 124 ALKSPSGRKYDAVIHCATG--IPWSTFEPNL-GTNGKVIDITPGPS 166 (240)
Q Consensus 124 ~~~~~~~~~~d~v~d~~g~--~~~~~~~~~l-~~~G~iv~~g~~~~ 166 (240)
-........+|.||==... ..+..+.+.| +++|+++.+.+.-+
T Consensus 105 g~~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP~ie 150 (247)
T PF08704_consen 105 GFDEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSPCIE 150 (247)
T ss_dssp --STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEESSHH
T ss_pred cccccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCHH
Confidence 1111112568888665554 3477888899 89999998876533
No 490
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=94.49 E-value=0.29 Score=39.70 Aligned_cols=93 Identities=6% Similarity=0.060 Sum_probs=57.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHh-cCCCEEEeCCCCc-ccc--ccCCCCCcccEEEeCCCC
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKS-LGADEVLDYKTPD-GAA--LKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~-~g~~~v~~~~~~~-~~~--~~~~~~~~~d~v~d~~g~ 142 (240)
.+|+|+| +|++|....-.+...|..|..+.+. ++.+..++ -|. .+.+..... ... ........+|+||-|+=.
T Consensus 3 m~I~IiG-aGaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~~~~~~~~~~~~~~~~~~D~viv~vK~ 80 (305)
T PRK05708 3 MTWHILG-AGSLGSLWACRLARAGLPVRLILRDRQRLAAYQQAGGL-TLVEQGQASLYAIPAETADAAEPIHRLLLACKA 80 (305)
T ss_pred ceEEEEC-CCHHHHHHHHHHHhCCCCeEEEEechHHHHHHhhcCCe-EEeeCCcceeeccCCCCcccccccCEEEEECCH
Confidence 4699999 9999998877777789999999975 56666654 343 222211111 000 001112478999999864
Q ss_pred CC----ccccccCCCCCcEEEEeC
Q 045248 143 IP----WSTFEPNLGTNGKVIDIT 162 (240)
Q Consensus 143 ~~----~~~~~~~l~~~G~iv~~g 162 (240)
.. +......+.++..++.+-
T Consensus 81 ~~~~~al~~l~~~l~~~t~vv~lQ 104 (305)
T PRK05708 81 YDAEPAVASLAHRLAPGAELLLLQ 104 (305)
T ss_pred HhHHHHHHHHHhhCCCCCEEEEEe
Confidence 33 444555667778777664
No 491
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=94.49 E-value=0.14 Score=41.51 Aligned_cols=76 Identities=22% Similarity=0.312 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-cc---HHHHHhcCC-C---EEEeCCCCccccccCCCCCcccEEE
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RN---IEFVKSLGA-D---EVLDYKTPDGAALKSPSGRKYDAVI 137 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~---~~~~~~~g~-~---~v~~~~~~~~~~~~~~~~~~~d~v~ 137 (240)
.+..|+|+||+|=+|..++..+-.+|++|.+++|+ +. .+.++++.. . .++..+-.+...+.. .-.|.|.||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~-ai~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDK-AIDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHH-HHhCCCEEE
Confidence 67899999999999999999999999999999974 33 345666651 1 222111111111110 114688998
Q ss_pred eCCCC
Q 045248 138 HCATG 142 (240)
Q Consensus 138 d~~g~ 142 (240)
-++..
T Consensus 84 H~Asp 88 (327)
T KOG1502|consen 84 HTASP 88 (327)
T ss_pred EeCcc
Confidence 88864
No 492
>PLN02778 3,5-epimerase/4-reductase
Probab=94.48 E-value=0.25 Score=39.91 Aligned_cols=52 Identities=13% Similarity=0.208 Sum_probs=38.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHH----HHHhcCCCEEEe
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIE----FVKSLGADEVLD 116 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~----~~~~~g~~~v~~ 116 (240)
....+|||+||+|-+|..+++.+...|.+|+..... ...+ .+++.+++.|++
T Consensus 7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH 63 (298)
T PLN02778 7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFN 63 (298)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEE
Confidence 355789999999999999999999999988755432 2322 234556777774
No 493
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=94.45 E-value=0.18 Score=45.54 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCccc----------------------HHHHHhcCCCEEEeCCCCcc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGARN----------------------IEFVKSLGADEVLDYKTPDG 122 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~~~----------------------~~~~~~~g~~~v~~~~~~~~ 122 (240)
..+++|+|+| +|+.|+.+...+...|.+|+++...++ .+.++++|.+..++..-...
T Consensus 191 ~~~k~VaIIG-aGpAGl~aA~~La~~G~~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~d 269 (652)
T PRK12814 191 KSGKKVAIIG-AGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGRD 269 (652)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCcEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccCc
Confidence 4678999999 899999999999999999988875321 34456777654333211000
Q ss_pred ccccCCCCCcccEEEeCCCC
Q 045248 123 AALKSPSGRKYDAVIHCATG 142 (240)
Q Consensus 123 ~~~~~~~~~~~d~v~d~~g~ 142 (240)
...... ...+|.||-++|.
T Consensus 270 v~~~~~-~~~~DaVilAtGa 288 (652)
T PRK12814 270 ITLEEL-QKEFDAVLLAVGA 288 (652)
T ss_pred cCHHHH-HhhcCEEEEEcCC
Confidence 001111 1248999999885
No 494
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.45 E-value=0.17 Score=40.43 Aligned_cols=87 Identities=16% Similarity=0.004 Sum_probs=57.0
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc-ccHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEeCCCCCC---
Q 045248 69 NILVTAASGGVGHYAVQLAKLGNTHVTASCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCATGIP--- 144 (240)
Q Consensus 69 ~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--- 144 (240)
+|.|+| .|.+|......++..|.+|++.+++ ++.+.+.+.|...... .+... -...|+||-|+....
T Consensus 2 ~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~---~~~~~-----~~~aDlVilavp~~~~~~ 72 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEAS---TDLSL-----LKDCDLVILALPIGLLLP 72 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCccccc---CCHhH-----hcCCCEEEEcCCHHHHHH
Confidence 588999 9999999888888889999999865 6777777777422111 11111 135799999997433
Q ss_pred -ccccccCCCCCcEEEEeCCC
Q 045248 145 -WSTFEPNLGTNGKVIDITPG 164 (240)
Q Consensus 145 -~~~~~~~l~~~G~iv~~g~~ 164 (240)
+......++++..+..++..
T Consensus 73 ~~~~l~~~l~~~~ii~d~~Sv 93 (279)
T PRK07417 73 PSEQLIPALPPEAIVTDVGSV 93 (279)
T ss_pred HHHHHHHhCCCCcEEEeCcch
Confidence 33344455555555555543
No 495
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=94.43 E-value=0.11 Score=42.32 Aligned_cols=76 Identities=30% Similarity=0.442 Sum_probs=47.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCC-CEEEEEeCc-ccHHHH-HhcC---CC-EEE--eCCCCc--cccccCC--CCCcc
Q 045248 67 QKNILVTAASGGVGHYAVQLAKLGN-THVTASCGA-RNIEFV-KSLG---AD-EVL--DYKTPD--GAALKSP--SGRKY 133 (240)
Q Consensus 67 g~~vlV~G~~g~vG~~~~~~a~~~g-~~v~~~~~~-~~~~~~-~~~g---~~-~v~--~~~~~~--~~~~~~~--~~~~~ 133 (240)
+++++|+|+++++|..+++.+...| ++|+.++++ ++.+.+ ++++ .. ..+ |..+.+ ...+... ...++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5789999999999999998888889 899998865 433322 3332 11 122 222221 1111111 12469
Q ss_pred cEEEeCCCC
Q 045248 134 DAVIHCATG 142 (240)
Q Consensus 134 d~v~d~~g~ 142 (240)
|++|.++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999873
No 496
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=94.41 E-value=0.13 Score=46.51 Aligned_cols=36 Identities=14% Similarity=0.101 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhC-CCEEEEEeCc
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLG-NTHVTASCGA 100 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~-g~~v~~~~~~ 100 (240)
+++.+|||+||+|-+|..+++.+... |.+|+++++.
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~ 349 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIG 349 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCC
Confidence 57889999999999999999887765 6899999864
No 497
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=94.41 E-value=0.4 Score=38.57 Aligned_cols=97 Identities=15% Similarity=0.108 Sum_probs=58.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-EEEEEeCc-c----cHHHHHhcCCCEEEeCCCCccccccCCCCCcccEEEe
Q 045248 65 GQQKNILVTAASGGVGHYAVQLAKLGNT-HVTASCGA-R----NIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIH 138 (240)
Q Consensus 65 ~~g~~vlV~G~~g~vG~~~~~~a~~~g~-~v~~~~~~-~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d 138 (240)
++++++|=+| .|.|.+++..+ ..|+ +|++++-+ - .++.++..+..... ............++.||+|+-
T Consensus 161 ~~g~~vlDvG--cGSGILaIAa~-kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~--~~~~~~~~~~~~~~~~DvIVA 235 (300)
T COG2264 161 KKGKTVLDVG--CGSGILAIAAA-KLGAKKVVGVDIDPQAVEAARENARLNGVELLV--QAKGFLLLEVPENGPFDVIVA 235 (300)
T ss_pred cCCCEEEEec--CChhHHHHHHH-HcCCceEEEecCCHHHHHHHHHHHHHcCCchhh--hcccccchhhcccCcccEEEe
Confidence 6889998888 34566555544 5677 89999953 2 34444455544211 011111112223368999987
Q ss_pred CCCCC----CccccccCCCCCcEEEEeCCCch
Q 045248 139 CATGI----PWSTFEPNLGTNGKVIDITPGPS 166 (240)
Q Consensus 139 ~~g~~----~~~~~~~~l~~~G~iv~~g~~~~ 166 (240)
.+=.. ...+..+.++|+|.+++.|-..+
T Consensus 236 NILA~vl~~La~~~~~~lkpgg~lIlSGIl~~ 267 (300)
T COG2264 236 NILAEVLVELAPDIKRLLKPGGRLILSGILED 267 (300)
T ss_pred hhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence 66322 25567778999999999996543
No 498
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.40 E-value=0.13 Score=40.38 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeC
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCG 99 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~ 99 (240)
.+++++|+||+|++|..+++.+...|++|+.+.+
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~ 39 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYR 39 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 6789999999999999999999999998887765
No 499
>PRK09135 pteridine reductase; Provisional
Probab=94.39 E-value=0.096 Score=40.68 Aligned_cols=35 Identities=14% Similarity=0.139 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 66 QQKNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 66 ~g~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
.++++||+|++|++|..+++.+...|++|+.+++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 56889999999999999998888899999999863
No 500
>PRK06924 short chain dehydrogenase; Provisional
Probab=94.39 E-value=0.086 Score=41.13 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=29.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCEEEEEeCc
Q 045248 68 KNILVTAASGGVGHYAVQLAKLGNTHVTASCGA 100 (240)
Q Consensus 68 ~~vlV~G~~g~vG~~~~~~a~~~g~~v~~~~~~ 100 (240)
++++|+||+|++|..+++.+...|++|+.+.+.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~ 34 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRT 34 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCC
Confidence 479999999999999999998899999998864
Done!