BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045249
(211 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKK2|AGL62_ARATH Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana
GN=AGL62 PE=1 SV=1
Length = 299
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 112/189 (59%), Gaps = 14/189 (7%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GRQKI++ K++++++LQVTFSKRRSGLF KA ELC LCGAEV I+VFSP K+F GHP+
Sbjct: 7 GRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPN 66
Query: 61 FDKILNRYLD--------QNHSSLDEVNTIPCVQQHNKEYEDAMQELEKEKKRGKMIEEE 112
D +++R+++ N+ L E VQ N + +LE EKK+ +++
Sbjct: 67 VDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDELKKI 126
Query: 113 KKKNKSNGRFWWQEGNIIDDMGIEELEEYLKAMKKLKGKVEMRVNEIMMNGYLAPNMNLG 172
++K K+ G WW++ ++++ + +LE + ++ LK V + + PN +G
Sbjct: 127 REKTKALGN-WWEDP--VEELALSQLEGFKGNLENLKKVVTVEASRFFQAN--VPNFYVG 181
Query: 173 NDHPD-AFG 180
+ + AFG
Sbjct: 182 SSSNNAAFG 190
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 102/157 (64%), Gaps = 7/157 (4%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GRQKI + K++ ++ QVTFSKRR+GLF KA ELC LCGAE+GIIVFSP K F GHP
Sbjct: 63 GRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPS 122
Query: 61 FDKILNRYLDQNHSSLDEVNTI---PCVQ-QHNKEYEDAMQELEKEKKRGKMIEEEKKKN 116
+ +L+RY+ +N+ SL + + P + N + + E+E+EKK+G+ +EE +K++
Sbjct: 123 VESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEMRKES 182
Query: 117 KSNGRF-WWQEGNIIDDMGIEELEEYLKAMKKLKGKV 152
WW++ +++M + +L+E A+++L+ V
Sbjct: 183 VRRSMINWWEKP--VEEMNMVQLQEMKYALEELRKTV 217
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR KI+IK++E+ NS QVTFSKRRSGL KA EL VLC AEV +IVFS +GK+F
Sbjct: 2 GRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTG 61
Query: 61 FDKILNRYLDQNHSS 75
+ L+RY + SS
Sbjct: 62 MKQTLSRYGNHQSSS 76
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 12/112 (10%)
Query: 2 RQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPDF 61
R K Q+K++E+ S QVTFSKRR+GL KA EL VLC AEV +I+FSP GK++ +
Sbjct: 3 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNM 62
Query: 62 DKILNRYLDQNHSSLDEVNTIPCVQ---QHNKEYEDA-----MQELEKEKKR 105
++RYL D V+T P + QH K YE A +++LE K++
Sbjct: 63 QDTIDRYLRHTK---DRVSTKPVSEENMQHLK-YEAANMMKKIEQLEASKRK 110
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 48/68 (70%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR KI+IK++E+ NS QVTFSKRR+GL KA EL VLC AEV +IVFS +GK+F
Sbjct: 2 GRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTS 61
Query: 61 FDKILNRY 68
K L RY
Sbjct: 62 MKKTLLRY 69
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1
PE=2 SV=1
Length = 256
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRR+GLF KA E+ VLC AEV ++VFS GK+F + P
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDP 61
Query: 60 DFDKILNRY 68
+KIL RY
Sbjct: 62 CMEKILERY 70
>sp|Q9ATE5|FBP24_PETHY MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1
Length = 268
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR KI++K++E+K S QVTFSKRR+GL K EL VLC A++G+I+FS GK+F P
Sbjct: 5 GRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQP 64
Query: 60 -DFDKILNRYLDQNHSSL 76
+I++RYL +SL
Sbjct: 65 HSMSQIISRYLQTTGASL 82
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR K+Q+K++E+K + QVTFSKRR+GL KA E+ VLC AEV IVFSP GK++ A
Sbjct: 2 GRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDS 61
Query: 60 DFDKILNRY 68
DKIL RY
Sbjct: 62 RMDKILERY 70
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 2 RQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHPD 60
R + ++K++E+ S QVTFSKRR+GL KA EL VLC AEV +IVFSP G+++ A P
Sbjct: 3 RGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
Query: 61 FDKILNRY 68
K ++RY
Sbjct: 63 LQKTIDRY 70
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum
lycopersicum GN=TDR4 PE=2 SV=1
Length = 227
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRRSGL KA E+ VLC AEVG+IVFS GK+F A
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDS 61
Query: 60 DFDKILNRY 68
++IL RY
Sbjct: 62 CMERILERY 70
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 2 RQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHPD 60
R + ++K++E+ S QVTFSKRR+GL KA EL VLC AEV +IVFSP G+++ A P
Sbjct: 3 RGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS 62
Query: 61 FDKILNRY 68
K ++RY
Sbjct: 63 LQKTIDRY 70
>sp|Q9M2K8|AGL18_ARATH Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana
GN=AGL18 PE=2 SV=1
Length = 256
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 13/123 (10%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR +I+IKK+E+ NS QVTFSKRR+GL KA EL +LC AEV +I+FS GKI+
Sbjct: 2 GRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSVC 61
Query: 61 FDKILNRY----LDQNHSSLDEVNTIPCVQQHNKEY---EDAMQ-ELEK-----EKKRGK 107
++IL+RY H E + C N+ +D+M+ ELE+ E+ +GK
Sbjct: 62 MEQILSRYGYTTASTEHKQQREHQLLICASHGNEAVLRNDDSMKGELERLQLAIERLKGK 121
Query: 108 MIE 110
+E
Sbjct: 122 ELE 124
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRRSGL KA E+ VLC AEVG+IVFS GK+F A
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDS 61
Query: 60 DFDKILNRY 68
+++L RY
Sbjct: 62 CMERLLERY 70
>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii
GN=SCM1 PE=2 SV=1
Length = 250
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRRSGL KA E+ VLC AEVG+IVFS GK+F A
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDS 61
Query: 60 DFDKILNRY 68
+++L RY
Sbjct: 62 CMERLLERY 70
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR KI+IK++++ S QVTFSKRRSGLF KA EL +LC AEVG++VFS +++
Sbjct: 2 GRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSS 61
Query: 61 FDKILNRY 68
I+ RY
Sbjct: 62 MKSIIERY 69
>sp|Q10CQ1|MAD14_ORYSJ MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica
GN=MADS14 PE=1 SV=2
Length = 246
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR K+Q+K++E+K + QVTFSKRRSGL KA E+ VLC AEV +I+FS GK++ A
Sbjct: 2 GRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDS 61
Query: 60 DFDKILNRY 68
DKIL RY
Sbjct: 62 CMDKILERY 70
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 45/67 (67%)
Query: 2 RQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPDF 61
R K Q+K++E+ S QVTFSKRR+GL KA EL VLC AEV +IVFSP GK++
Sbjct: 3 RGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASAST 62
Query: 62 DKILNRY 68
K + RY
Sbjct: 63 QKTIERY 69
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR ++++K++E+K + QVTFSKRR+GL KA EL VLC AEV +I+FS GK++ G
Sbjct: 2 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 61
Query: 61 FDKILNRYLDQNHSSLDEVNTIPCVQQHNKEYEDAMQELEKEKKRGKMIEEEKKKNKSNG 120
K L RY +++ D N + E + E+ K K + + ++ ++
Sbjct: 62 ITKTLERYQHCCYNAQDSNNAL-------SETQSWYHEMSKLKAKFEALQRTQRHLL--- 111
Query: 121 RFWWQEGNIIDDMGIEELEEYLKAMKKLKGKVEMRVNEIMM 161
G + + ++EL++ K ++ + R ++MM
Sbjct: 112 ------GEDLGPLSVKELQQLEKQLECALSQARQRKTQLMM 146
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%)
Query: 2 RQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPDF 61
R++I I+++++ + QVTFSKRR GLF KA EL +LC AEVG++VFS GK+F
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSM 81
Query: 62 DKILNRY 68
++I++RY
Sbjct: 82 EQIIDRY 88
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRR+GLF KA E+ VLC AEV ++VFS GK+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 60 DFDKILNRY 68
+KIL RY
Sbjct: 62 CMEKILERY 70
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 20/163 (12%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
R+KIQI+K+++ + QVTFSKRR GLF KA EL VLC A+V +I+FS GK+F
Sbjct: 2 AREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSS 61
Query: 61 FDKILNRY--LDQNHSSLDEVNTIPCVQQHNKEYEDAMQELEKEKKRGKMIEEEKKKNKS 118
++L R+ +N LD+ P ++ E D +M +E K+
Sbjct: 62 MKEVLERHNLQSKNLEKLDQ----PSLELQLVENSD----------HARMSKEIADKSH- 106
Query: 119 NGRFWWQEGNIIDDMGIEELEEYLKAMKK-LKGKVEMRVNEIM 160
R G + + IEEL++ KA++ L +E + ++IM
Sbjct: 107 --RLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIM 147
>sp|P29382|SEP1_ARATH Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1
PE=1 SV=2
Length = 251
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 73/115 (63%), Gaps = 7/115 (6%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++++K++E+K + QVTF+KRR+GL KA EL VLC AEV +I+FS GK++
Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 61
Query: 60 DFDKILNRYLDQNHSSLDEVNTIPCVQQHNKEYEDAMQELEKEKKRGKMIEEEKK 114
+ K L+RY ++ S+ EVN P KE E++ +E K K R + ++ +++
Sbjct: 62 NMLKTLDRYQKCSYGSI-EVNNKPA-----KELENSYREYLKLKGRYENLQRQQR 110
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR KI+IK++E+ + QVTF KRR+GL KA EL VLC AEV +IVFS G+++ + +
Sbjct: 2 GRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNN 61
Query: 61 FDKILNRYLDQNHSSLDEVNTIPCVQQHNKEYEDAMQELEKEKKRGKMIEEEKKKNKSNG 120
+ RY + D NT VQ+ N Y QE K +++ + I+ SN
Sbjct: 62 IRSTIERY---KKACSDSTNT-STVQEINAAY--YQQESAKLRQQIQTIQ------NSNR 109
Query: 121 RFWWQEGNIIDDMGIEELEEYLKAMKKLKGKVEMRVNEIMM 161
G+ + + ++EL++ ++K ++ + +E+++
Sbjct: 110 NLM---GDSLSSLSVKELKQVENRLEKAISRIRSKKHELLL 147
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR KI IK++ + S QVTFSKRR+GL KA EL +LC AEVG+I+FS G+++
Sbjct: 2 GRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSSS 61
Query: 61 FDKILNRYLD 70
++ RY D
Sbjct: 62 MKSVIERYSD 71
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRR+GLF KA E+ VLC AEV ++VFS GK+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 60 DFDKILNRY 68
+KIL RY
Sbjct: 62 CMEKILERY 70
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRR+GLF KA E+ VLC AEV ++VFS GK+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 60 DFDKILNRY 68
+KIL RY
Sbjct: 62 CMEKILERY 70
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRR+GLF KA E+ VLC AEV ++VFS GK+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 60 DFDKILNRY 68
+KIL RY
Sbjct: 62 CMEKILERY 70
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR KI I++++D S QVTFSKRR GL KA EL +LC AEVG+I+FS GK++
Sbjct: 2 GRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSS 61
Query: 61 FDKILNRY 68
+++RY
Sbjct: 62 MKSVIDRY 69
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana
GN=ANR1 PE=1 SV=1
Length = 234
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR KI I+++++ S QVTFSKRRSGL KA EL +LC AEVG+I+FS GK++ A +
Sbjct: 2 GRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASNS 61
Query: 60 DFDKILNRY 68
I+ RY
Sbjct: 62 SMKTIIERY 70
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR KI+IK++E+ + QVTF KRR+GL KA EL VLC AEV +IVFS G+++ +
Sbjct: 2 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 61
Query: 61 FDKILNRYLDQNHSSLDEVNTIPCVQQHNKEYEDAMQELEKEKKRGKMIEEEKKKNKSNG 120
+ RY N + + QH +++ K+ ++ +N
Sbjct: 62 VKSTVERYKKANSDTSNSGTVAEVNAQH------------YQQESSKLRQQISSLQNANS 109
Query: 121 RFWWQEGNIIDDMGIEELEEYLKAMKKLKGKVEMRVNEIM 160
R G+ I+ M + +L++ ++K K+ R NE++
Sbjct: 110 RTIV--GDSINTMSLRDLKQVENRLEKGIAKIRARKNELL 147
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
R+KIQIKK+++ + QVTFSKRR GLF KA EL VLC A+V +I+FS GK+F
Sbjct: 2 AREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSS 61
Query: 61 FDKILNR 67
+IL R
Sbjct: 62 MKQILER 68
>sp|Q8RVL4|DEF21_ANTMA MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1
Length = 247
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR KI++K++E+ S QVTFSKRRSGL K EL VLC A++G+IVFS GK+ P
Sbjct: 2 GRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPP 61
Query: 61 FD--KILNRYL 69
F +I++RY+
Sbjct: 62 FSMKQIIDRYV 72
>sp|P0C5B1|MAD14_ORYSI MADS-box transcription factor 14 OS=Oryza sativa subsp. indica
GN=MADS14 PE=2 SV=1
Length = 246
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR K+Q+K++E+ + QVTFSKRRSGL KA E+ VLC AEV +I+FS GK++ A
Sbjct: 2 GRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDS 61
Query: 60 DFDKILNRY 68
DKIL RY
Sbjct: 62 CMDKILERY 70
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 99/181 (54%), Gaps = 17/181 (9%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR +I+IK++E+ S QVTF KRR+GL KA EL VLC AEV +IVFS G+++ + +
Sbjct: 2 GRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNN 61
Query: 60 DFDKILNRYLDQNHSSLDEVNTIPCVQQHNKEYEDAMQELEKEKKRGKMIEEEKKKNKSN 119
+ ++RY + + + P ++ + ++Y QE K + + +M++ K
Sbjct: 62 NVKATIDRY--KKAHACGSTSGAPLIEVNAQQYYQ--QESAKLRHQIQMLQNTNK----- 112
Query: 120 GRFWWQEGNIIDDMGIEELEEYLKAMKKLKGKVEMRVNEIMMN--GYLAPN-MNLGNDHP 176
G+ + ++ ++EL++ ++K K+ R NE++ + Y+A + L ND+
Sbjct: 113 ----HLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNM 168
Query: 177 D 177
D
Sbjct: 169 D 169
>sp|P29384|SEP2_ARATH Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2
PE=1 SV=1
Length = 250
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++++K++E+K + QVTF+KRR+GL KA EL VLC AEV +IVFS GK++
Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTS 61
Query: 60 DFDKILNRYLDQNHSSLDEVNTIPCVQQHNKEYEDAMQELEKEKKRGKMIEEEKK 114
+ K L RY ++ S+ EVN P KE E++ +E K K R + ++ +++
Sbjct: 62 NMLKTLERYQKCSYGSI-EVNNKPA-----KELENSYREYLKLKGRYENLQRQQR 110
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 22/163 (13%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF--LAGH 58
GR KI+IK++E+ + QVTFSKRR GL KA EL VLC AE+G+I+FS +GK+F +
Sbjct: 2 GRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSAS 61
Query: 59 PDFDKILNRYLDQNHSSLDEVNTIPCVQQHNKEYEDAMQELEKEKKRGKMIEEEKKKNKS 118
KI+ RY + + + EY++ Q L E R K E +K ++
Sbjct: 62 SSMKKIIERYQKVSGARIT-------------EYDN--QHLYCEMTRMK---NENEKLQT 103
Query: 119 NGRFWWQEGNIIDDMGIEELEEYLKAMKKLKGKVEMRVNEIMM 161
N R G + + + EL + ++ +V R N++M+
Sbjct: 104 NIRRMM--GEDLTSLTMTELHHLGQQLESASSRVRSRKNQLML 144
>sp|Q39685|CMB1_DIACA MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1
Length = 233
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 68/115 (59%), Gaps = 8/115 (6%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++++K++E+K + QVTF+KRR+GL KA EL VLC AEV +IVFS GK++
Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTS 61
Query: 60 DFDKILNRYLDQNHSSLDEVNTIPCVQQHNKEYEDAMQELEKEKKRGKMIEEEKK 114
+K L RY ++ SL+ Q +KE E + QE K K + +++ +
Sbjct: 62 CMNKTLERYQRCSYGSLE-------TSQPSKETESSYQEYLKLKAKVDVLQRSHR 109
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRR+GL KA E+ VLC AEV +IVFS GK+F
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYTSES 61
Query: 60 DFDKILNRY 68
+K+L RY
Sbjct: 62 CMEKVLERY 70
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana
GN=AGL8 PE=1 SV=1
Length = 242
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRRSGL KA E+ VLC AEV +IVFS GK+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDS 61
Query: 60 DFDKILNRY 68
++IL RY
Sbjct: 62 CMERILERY 70
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba
GN=AGL8 PE=2 SV=1
Length = 241
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRRSGL KA E+ VLC AEV +++FS GK+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDS 61
Query: 60 DFDKILNRY 68
+KIL RY
Sbjct: 62 CMEKILERY 70
>sp|Q8RYD9|TT16_ARATH Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1
SV=1
Length = 252
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKI--FLAGH 58
GR KI+IKK+E++ + QVTFSKRR+GL K EL +LC A +G+IVFS GK+ F +
Sbjct: 2 GRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQ 61
Query: 59 PDFDKILNRYLDQN 72
++++RYL N
Sbjct: 62 NRMPQLIDRYLHTN 75
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 86/161 (53%), Gaps = 14/161 (8%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR ++++K++E+K + QVTFSKRR+GL KA EL VLC AEV +I+FS GK++ G
Sbjct: 2 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 61
Query: 61 FDKILNRYLDQNHSSLDEVNTIPCVQQHNKEYEDAMQELEKEKKRGKMIEEEKKKNKSNG 120
+K L +Y +++ + + E++ QE+ + K + + ++ ++
Sbjct: 62 INKTLEKYNSCCYNAQGSNSALA-----GGEHQSWYQEMSRLKTKLECLQRSQRH----- 111
Query: 121 RFWWQEGNIIDDMGIEELEEYLKAMKKLKGKVEMRVNEIMM 161
G + + I+EL++ K ++ + R +IMM
Sbjct: 112 ----MLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMM 148
>sp|Q8VWM8|M17_MAIZE MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1
Length = 259
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHP- 59
GR KI+IK++E+ + QVTFSKRR GL KA EL VLC A VG+++FS GK+F P
Sbjct: 2 GRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPA 61
Query: 60 -DFDKILNRYLDQNHSSLDEVN 80
+++ +Y +S +E+N
Sbjct: 62 CSLRELIEQYQHATNSHFEEIN 83
>sp|Q40702|MADS2_ORYSJ MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica
GN=MADS2 PE=2 SV=1
Length = 209
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHP- 59
GR KI+IK++E+ + QVTFSKRRSG+ KA E+ VLC AEVG+++FS GK++ P
Sbjct: 2 GRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPK 61
Query: 60 -DFDKILNRY--------LDQNHSSL 76
+IL +Y D+ H SL
Sbjct: 62 TSLSRILEKYQTNSGKILWDEKHKSL 87
>sp|Q55F37|SRFC_DICDI Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3
SV=1
Length = 1050
Score = 75.1 bits (183), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR KI I+K+ ++ + Q TF+KR++GL KAMEL +LC E+ +IVFS N K+F D
Sbjct: 4 GRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQYSSRD 63
Query: 61 FDKILNRYLDQNHSS 75
DK+L RY D ++
Sbjct: 64 MDKLLIRYTDNTDNT 78
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2
SV=1
Length = 254
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRR+GL KA E+ VLC AEV ++VFS GK+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 60 DFDKILNRY 68
+KIL RY
Sbjct: 62 CMEKILERY 70
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRR+GL KA E+ VLC AEV ++VFS GK+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 60 DFDKILNRY 68
+KIL RY
Sbjct: 62 CMEKILERY 70
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6
PE=1 SV=2
Length = 252
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 16/161 (9%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIFLAGHPD 60
GR ++++K++E+K + QVTFSKRR+GL KA EL VLC AEV +I+FS GK++ G
Sbjct: 2 GRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVG 61
Query: 61 FDKILNRYLDQNHSSLDEVNTIPCVQQHNKEYEDAMQELEKEKKRGKMIEEEKKKNKSNG 120
+ + RY + SL N + E+ Q +E + K E + N
Sbjct: 62 IESTIERYNRCYNCSLS-----------NNKPEETTQSWCQEVTKLKSKYESLVRTNRNL 110
Query: 121 RFWWQEGNIIDDMGIEELEEYLKAMKKLKGKVEMRVNEIMM 161
G + +MG++EL+ + ++ R ++MM
Sbjct: 111 L-----GEDLGEMGVKELQALERQLEAALTATRQRKTQVMM 146
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRR+GL KA E+ VLC AEV ++VFS GK+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 60 DFDKILNRY 68
+KIL RY
Sbjct: 62 CMEKILERY 70
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 1 GRQKIQIKKLEDKNSLQVTFSKRRSGLFSKAMELCVLCGAEVGIIVFSPNGKIF-LAGHP 59
GR ++Q+K++E+K + QVTFSKRR+GL KA E+ VLC AEV ++VFS GK+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 60 DFDKILNRY 68
+KIL RY
Sbjct: 62 CMEKILERY 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,528,135
Number of Sequences: 539616
Number of extensions: 3970841
Number of successful extensions: 20976
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 20488
Number of HSP's gapped (non-prelim): 559
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 59 (27.3 bits)