Query 045250
Match_columns 165
No_of_seqs 111 out of 337
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 11:20:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045250.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045250hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK12396 5-methylribose kinase 100.0 3.1E-48 6.7E-53 336.4 13.7 156 3-165 4-162 (409)
2 TIGR01767 MTRK 5-methylthiorib 100.0 1.6E-41 3.5E-46 291.6 11.9 126 38-164 1-128 (370)
3 PRK09550 mtnK methylthioribose 100.0 5.3E-40 1.1E-44 285.8 18.0 156 3-164 1-159 (401)
4 PLN02756 S-methyl-5-thioribose 100.0 1.3E-39 2.7E-44 283.8 16.6 164 1-164 1-164 (418)
5 COG4857 Predicted kinase [Gene 100.0 1.7E-40 3.8E-45 276.4 8.3 159 4-165 3-164 (408)
6 COG3642 Mn2+-dependent serine/ 99.3 1.2E-11 2.7E-16 98.3 9.2 101 46-151 10-111 (204)
7 cd05151 ChoK Choline Kinase (C 99.1 4.4E-10 9.5E-15 84.7 10.1 102 36-152 2-103 (170)
8 cd05154 ACAD10_11_like Acyl-Co 99.1 5.9E-10 1.3E-14 86.9 9.8 111 35-154 1-121 (223)
9 KOG3087 Serine/threonine prote 99.0 4.6E-09 1E-13 84.0 9.2 122 36-159 11-148 (229)
10 TIGR03724 arch_bud32 Kae1-asso 98.9 8.6E-09 1.9E-13 80.0 9.5 108 40-152 2-110 (199)
11 PF01636 APH: Phosphotransfera 98.8 1.2E-08 2.5E-13 79.6 7.1 104 36-152 1-109 (239)
12 PRK05231 homoserine kinase; Pr 98.7 1.4E-07 3E-12 78.9 11.6 128 4-158 2-137 (319)
13 cd05150 APH Aminoglycoside 3'- 98.7 1.1E-07 2.3E-12 76.6 10.4 102 37-153 3-107 (244)
14 PRK14879 serine/threonine prot 98.7 8.9E-08 1.9E-12 74.8 9.6 112 38-152 2-115 (211)
15 cd05157 ETNK_euk Ethanolamine 98.7 1.7E-07 3.6E-12 74.8 10.8 105 35-156 1-108 (235)
16 TIGR00938 thrB_alt homoserine 98.7 2.7E-07 5.9E-12 77.1 12.1 128 5-158 3-138 (307)
17 cd05120 APH_ChoK_like Aminogly 98.7 1.7E-07 3.7E-12 67.4 8.8 102 37-152 3-106 (155)
18 PF03881 Fructosamin_kin: Fruc 98.7 1.4E-07 3.1E-12 79.3 9.2 98 32-150 17-116 (288)
19 PLN02876 acyl-CoA dehydrogenas 98.6 5E-07 1.1E-11 85.4 13.5 135 8-154 17-164 (822)
20 cd05153 HomoserineK_II Homoser 98.6 3.3E-07 7.1E-12 75.6 9.9 120 12-158 2-129 (296)
21 TIGR02721 ycfN_thiK thiamine k 98.6 2.7E-07 5.8E-12 75.0 9.0 101 37-153 1-101 (256)
22 PRK10593 hypothetical protein; 98.6 1.6E-07 3.4E-12 78.9 7.8 109 34-153 16-129 (297)
23 cd05156 ChoK_euk Choline Kinas 98.5 4.2E-07 9E-12 75.4 8.4 104 35-155 1-112 (302)
24 cd05155 APH_ChoK_like_1 Unchar 98.4 1E-06 2.2E-11 70.9 8.3 102 37-154 2-109 (235)
25 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 1.3E-06 2.9E-11 70.7 8.8 102 37-151 6-110 (226)
26 PRK01723 3-deoxy-D-manno-octul 98.4 8E-06 1.7E-10 66.6 11.8 114 37-152 36-162 (239)
27 cd05152 MPH2' Macrolide 2'-Pho 98.3 6.2E-06 1.3E-10 68.7 10.2 108 34-154 13-131 (276)
28 COG3173 Predicted aminoglycosi 98.2 1.4E-05 3.1E-10 68.4 10.4 131 7-152 6-141 (321)
29 PRK09605 bifunctional UGMP fam 98.2 1E-05 2.2E-10 73.0 9.1 110 37-152 338-448 (535)
30 PRK10359 lipopolysaccharide co 98.1 5.5E-05 1.2E-09 62.0 11.9 107 36-152 35-155 (232)
31 PLN02236 choline kinase 98.0 2.4E-05 5.1E-10 67.1 8.8 123 11-152 16-145 (344)
32 PF06293 Kdo: Lipopolysacchari 98.0 2.9E-05 6.4E-10 61.7 8.7 94 57-152 34-138 (206)
33 COG2334 Putative homoserine ki 98.0 7.8E-05 1.7E-09 64.0 11.0 132 1-158 3-144 (331)
34 PLN02421 phosphotransferase, a 97.9 6.9E-05 1.5E-09 63.8 9.5 105 31-152 13-122 (330)
35 PRK15123 lipopolysaccharide co 97.9 0.00014 2.9E-09 60.7 11.0 111 37-152 30-158 (268)
36 COG3001 Uncharacterized protei 97.9 0.00011 2.4E-09 60.9 9.9 99 33-153 17-118 (286)
37 PRK09902 hypothetical protein; 97.9 0.00039 8.5E-09 56.5 12.2 111 43-156 29-155 (216)
38 cd05145 RIO1_like RIO kinase f 97.8 0.00034 7.3E-09 54.5 10.7 109 38-150 3-135 (190)
39 PRK11768 serine/threonine prot 97.7 0.00066 1.4E-08 57.6 12.1 125 5-155 7-139 (325)
40 PF02958 EcKinase: Ecdysteroid 97.7 0.00013 2.8E-09 60.2 7.4 109 41-154 2-133 (294)
41 PRK06148 hypothetical protein; 97.6 0.0014 3E-08 63.8 14.2 128 8-159 10-152 (1013)
42 PF01163 RIO1: RIO1 family; I 97.6 0.00026 5.6E-09 56.2 7.1 101 48-151 2-126 (188)
43 smart00090 RIO RIO-like kinase 97.6 0.00077 1.7E-08 54.9 9.8 110 38-152 34-168 (237)
44 PTZ00384 choline kinase; Provi 97.5 0.00058 1.3E-08 59.7 9.1 110 31-152 49-161 (383)
45 cd05147 RIO1_euk RIO kinase fa 97.5 0.0016 3.5E-08 51.1 10.5 109 38-151 3-137 (190)
46 PF04655 APH_6_hur: Aminoglyco 97.5 0.00043 9.3E-09 57.4 7.3 101 39-153 9-110 (253)
47 cd05069 PTKc_Yes Catalytic dom 97.5 0.0038 8.1E-08 49.7 12.4 105 36-152 10-122 (260)
48 TIGR02906 spore_CotS spore coa 97.4 0.0019 4.1E-08 53.4 10.5 92 47-158 11-110 (313)
49 cd05119 RIO RIO kinase family, 97.3 0.0033 7.1E-08 47.9 10.3 109 38-150 3-132 (187)
50 PTZ00296 choline kinase; Provi 97.3 0.0019 4.1E-08 57.5 9.7 105 31-152 104-218 (442)
51 cd05146 RIO3_euk RIO kinase fa 97.2 0.00083 1.8E-08 53.8 6.2 66 83-151 75-144 (197)
52 cd05070 PTKc_Fyn_Yrk Catalytic 97.1 0.01 2.2E-07 47.1 11.6 105 36-152 10-122 (260)
53 PRK06149 hypothetical protein; 97.1 0.0096 2.1E-07 57.8 13.2 128 8-159 16-156 (972)
54 cd05071 PTKc_Src Catalytic dom 97.1 0.017 3.6E-07 46.2 12.2 105 36-152 10-122 (262)
55 cd05144 RIO2_C RIO kinase fami 97.1 0.0071 1.5E-07 47.0 9.8 110 37-152 20-145 (198)
56 cd05082 PTKc_Csk Catalytic dom 96.9 0.02 4.3E-07 45.4 11.6 103 36-152 10-122 (256)
57 PRK12274 serine/threonine prot 96.9 0.01 2.2E-07 48.3 9.6 103 36-152 6-111 (218)
58 cd00180 PKc Catalytic domain o 96.9 0.025 5.3E-07 41.9 11.0 101 40-151 1-111 (215)
59 PRK09188 serine/threonine prot 96.9 0.014 3E-07 50.8 10.9 106 36-151 22-130 (365)
60 cd05587 STKc_cPKC Catalytic do 96.9 0.016 3.5E-07 48.1 10.9 108 37-152 5-121 (324)
61 cd05115 PTKc_Zap-70 Catalytic 96.9 0.022 4.8E-07 45.5 11.3 104 39-152 2-115 (257)
62 cd05629 STKc_NDR_like_fungal C 96.9 0.012 2.6E-07 50.0 10.2 108 36-152 5-121 (377)
63 cd05039 PTKc_Csk_like Catalyti 96.8 0.021 4.5E-07 45.2 10.7 105 36-152 10-122 (256)
64 cd05589 STKc_PKN Catalytic dom 96.8 0.021 4.6E-07 47.4 11.2 110 37-152 4-121 (324)
65 cd05591 STKc_nPKC_epsilon Cata 96.8 0.021 4.5E-07 47.4 10.8 106 39-152 2-116 (321)
66 cd05073 PTKc_Hck Catalytic dom 96.8 0.031 6.6E-07 44.5 11.4 105 36-152 10-122 (260)
67 TIGR01982 UbiB 2-polyprenylphe 96.8 0.0084 1.8E-07 53.2 8.8 116 34-151 119-276 (437)
68 cd05114 PTKc_Tec_Rlk Catalytic 96.7 0.047 1E-06 43.2 12.1 104 37-152 9-120 (256)
69 cd05613 STKc_MSK1_N N-terminal 96.7 0.035 7.6E-07 44.8 11.3 110 37-152 5-125 (290)
70 cd05599 STKc_NDR_like Catalyti 96.7 0.026 5.6E-07 47.5 10.8 108 36-152 5-121 (364)
71 cd05615 STKc_cPKC_alpha Cataly 96.7 0.024 5.2E-07 47.2 10.4 108 37-152 5-121 (323)
72 cd07862 STKc_CDK6 Catalytic do 96.6 0.068 1.5E-06 43.0 12.7 108 37-152 6-130 (290)
73 cd06631 STKc_YSK4 Catalytic do 96.6 0.026 5.6E-07 44.8 10.0 110 37-152 5-122 (265)
74 cd05614 STKc_MSK2_N N-terminal 96.6 0.029 6.2E-07 46.6 10.6 109 37-152 5-125 (332)
75 cd05598 STKc_LATS Catalytic do 96.6 0.037 8E-07 46.9 11.4 108 36-152 5-121 (376)
76 cd05072 PTKc_Lyn Catalytic dom 96.6 0.05 1.1E-06 43.0 11.6 105 36-152 10-123 (261)
77 cd07837 STKc_CdkB_plant Cataly 96.6 0.06 1.3E-06 43.4 12.1 107 36-152 5-130 (295)
78 cd05600 STKc_Sid2p_Dbf2p Catal 96.6 0.035 7.6E-07 46.2 11.0 109 36-152 5-121 (333)
79 cd05619 STKc_nPKC_theta Cataly 96.6 0.039 8.3E-07 45.9 11.1 106 39-152 2-116 (316)
80 cd06917 STKc_NAK1_like Catalyt 96.6 0.064 1.4E-06 42.8 11.9 108 37-152 6-121 (277)
81 cd06638 STKc_myosinIIIA Cataly 96.5 0.058 1.3E-06 43.3 11.6 107 33-151 18-143 (286)
82 cd05084 PTKc_Fes Catalytic dom 96.5 0.04 8.6E-07 43.4 10.3 104 38-152 1-114 (252)
83 cd05595 STKc_PKB_beta Catalyti 96.5 0.033 7.2E-07 46.3 10.2 106 39-152 2-115 (323)
84 cd05584 STKc_p70S6K Catalytic 96.5 0.031 6.8E-07 46.4 10.1 109 37-152 1-120 (323)
85 cd05083 PTKc_Chk Catalytic dom 96.5 0.069 1.5E-06 42.2 11.5 103 37-152 11-120 (254)
86 cd05580 STKc_PKA Catalytic dom 96.5 0.048 1E-06 44.2 10.8 106 37-151 6-120 (290)
87 smart00219 TyrKc Tyrosine kina 96.5 0.044 9.5E-07 42.9 10.2 105 37-152 4-123 (258)
88 cd05633 STKc_GRK3 Catalytic do 96.4 0.072 1.6E-06 43.1 11.7 107 40-152 2-117 (279)
89 cd05593 STKc_PKB_gamma Catalyt 96.4 0.043 9.3E-07 45.8 10.6 106 39-152 2-115 (328)
90 cd05616 STKc_cPKC_beta Catalyt 96.4 0.042 9E-07 45.6 10.5 108 37-152 5-121 (323)
91 cd05627 STKc_NDR2 Catalytic do 96.4 0.045 9.8E-07 46.1 10.9 108 36-152 5-121 (360)
92 cd06649 PKc_MEK2 Catalytic dom 96.4 0.06 1.3E-06 44.8 11.4 105 36-151 9-122 (331)
93 cd05067 PTKc_Lck_Blk Catalytic 96.4 0.074 1.6E-06 42.1 11.4 105 36-152 10-122 (260)
94 cd05590 STKc_nPKC_eta Catalyti 96.4 0.044 9.5E-07 45.5 10.4 106 39-152 2-116 (320)
95 cd05573 STKc_ROCK_NDR_like Cat 96.4 0.031 6.7E-07 46.5 9.4 107 36-151 5-120 (350)
96 PHA02988 hypothetical protein; 96.4 0.057 1.2E-06 44.1 10.8 107 36-151 24-141 (283)
97 cd06640 STKc_MST4 Catalytic do 96.4 0.046 9.9E-07 43.9 10.0 106 36-152 8-121 (277)
98 PTZ00263 protein kinase A cata 96.4 0.062 1.3E-06 44.8 11.1 108 36-152 22-138 (329)
99 cd05617 STKc_aPKC_zeta Catalyt 96.4 0.037 8E-07 46.1 9.8 106 39-152 2-116 (327)
100 cd05620 STKc_nPKC_delta Cataly 96.3 0.053 1.1E-06 45.0 10.6 106 39-152 2-116 (316)
101 cd05113 PTKc_Btk_Bmx Catalytic 96.3 0.1 2.3E-06 41.4 11.8 104 36-152 8-120 (256)
102 cd05571 STKc_PKB Catalytic dom 96.3 0.052 1.1E-06 45.1 10.4 106 39-152 2-115 (323)
103 cd07859 STKc_TDY_MAPK_plant Ca 96.3 0.063 1.4E-06 44.2 10.7 105 37-152 5-123 (338)
104 cd06610 STKc_OSR1_SPAK Catalyt 96.3 0.081 1.7E-06 41.7 10.9 105 37-152 6-122 (267)
105 cd05085 PTKc_Fer Catalytic dom 96.3 0.1 2.3E-06 40.8 11.5 104 39-152 2-113 (250)
106 cd05068 PTKc_Frk_like Catalyti 96.3 0.083 1.8E-06 41.9 11.0 104 36-152 10-123 (261)
107 cd07861 STKc_CDK1_euk Catalyti 96.3 0.11 2.3E-06 41.7 11.6 105 37-152 5-121 (285)
108 cd05583 STKc_MSK_N N-terminal 96.3 0.041 8.9E-07 44.4 9.2 109 37-151 5-124 (288)
109 cd05582 STKc_RSK_N N-terminal 96.3 0.061 1.3E-06 44.4 10.5 105 38-152 2-118 (318)
110 cd06615 PKc_MEK Catalytic doma 96.2 0.077 1.7E-06 43.6 11.0 105 36-150 5-117 (308)
111 KOG4250 TANK binding protein k 96.2 0.011 2.4E-07 55.2 6.4 105 34-149 14-137 (732)
112 cd06606 STKc_MAPKKK Catalytic 96.2 0.099 2.1E-06 40.5 11.0 106 37-151 5-120 (260)
113 cd05628 STKc_NDR1 Catalytic do 96.2 0.07 1.5E-06 45.1 10.8 109 36-152 5-121 (363)
114 cd05592 STKc_nPKC_theta_delta 96.2 0.066 1.4E-06 44.4 10.5 106 39-152 2-116 (316)
115 cd05034 PTKc_Src_like Catalyti 96.2 0.14 3E-06 40.4 11.9 103 37-152 11-123 (261)
116 cd06654 STKc_PAK1 Catalytic do 96.2 0.12 2.7E-06 42.1 11.9 109 33-152 20-136 (296)
117 cd05038 PTKc_Jak_rpt2 Catalyti 96.2 0.082 1.8E-06 42.1 10.6 105 37-152 9-129 (284)
118 cd05059 PTKc_Tec_like Catalyti 96.2 0.091 2E-06 41.6 10.7 104 36-152 8-120 (256)
119 cd06611 STKc_SLK_like Catalyti 96.2 0.048 1E-06 43.7 9.1 103 37-151 10-122 (280)
120 cd08228 STKc_Nek6 Catalytic do 96.2 0.088 1.9E-06 41.7 10.5 108 37-152 7-126 (267)
121 PF07914 DUF1679: Protein of u 96.2 0.058 1.3E-06 47.7 10.3 117 34-154 35-190 (414)
122 cd05041 PTKc_Fes_like Catalyti 96.1 0.087 1.9E-06 41.3 10.3 103 39-152 2-113 (251)
123 cd07871 STKc_PCTAIRE3 Catalyti 96.1 0.16 3.4E-06 41.2 12.2 105 36-152 9-123 (288)
124 cd05570 STKc_PKC Catalytic dom 96.1 0.069 1.5E-06 44.2 10.2 106 39-152 2-116 (318)
125 cd06652 STKc_MEKK2 Catalytic d 96.1 0.12 2.5E-06 41.1 11.1 109 37-152 7-126 (265)
126 cd05079 PTKc_Jak1_rpt2 Catalyt 96.1 0.1 2.3E-06 42.0 11.0 107 36-152 8-129 (284)
127 cd05585 STKc_YPK1_like Catalyt 96.1 0.067 1.4E-06 44.1 9.9 105 40-152 1-113 (312)
128 cd07831 STKc_MOK Catalytic dom 96.1 0.2 4.3E-06 39.9 12.3 105 37-152 4-120 (282)
129 cd08215 STKc_Nek Catalytic dom 96.0 0.12 2.7E-06 40.1 10.7 107 37-152 5-123 (258)
130 cd05037 PTK_Jak_rpt1 Pseudokin 96.0 0.097 2.1E-06 41.1 10.2 102 39-152 2-121 (259)
131 cd05618 STKc_aPKC_iota Catalyt 96.0 0.092 2E-06 43.9 10.5 106 39-152 2-116 (329)
132 cd07869 STKc_PFTAIRE1 Catalyti 96.0 0.22 4.7E-06 40.7 12.6 106 36-152 9-123 (303)
133 cd05096 PTKc_DDR1 Catalytic do 96.0 0.1 2.2E-06 42.6 10.6 105 37-152 10-158 (304)
134 cd05116 PTKc_Syk Catalytic dom 96.0 0.14 3.1E-06 40.5 11.1 105 39-152 2-115 (257)
135 cd07863 STKc_CDK4 Catalytic do 96.0 0.21 4.7E-06 40.0 12.3 108 37-152 5-128 (288)
136 cd05588 STKc_aPKC Catalytic do 96.0 0.098 2.1E-06 43.6 10.6 106 39-152 2-116 (329)
137 cd05612 STKc_PRKX_like Catalyt 96.0 0.046 1E-06 44.6 8.4 107 37-152 6-121 (291)
138 cd05574 STKc_phototropin_like 96.0 0.14 3E-06 41.9 11.2 107 37-152 6-123 (316)
139 cd08224 STKc_Nek6_Nek7 Catalyt 96.0 0.081 1.8E-06 41.7 9.5 108 37-152 7-126 (267)
140 cd07848 STKc_CDKL5 Catalytic d 96.0 0.19 4.1E-06 40.4 11.8 107 37-152 6-120 (287)
141 cd00192 PTKc Catalytic domain 96.0 0.14 2.9E-06 40.0 10.7 103 39-152 2-125 (262)
142 cd06650 PKc_MEK1 Catalytic dom 95.9 0.12 2.7E-06 43.2 10.9 104 36-150 9-121 (333)
143 cd05057 PTKc_EGFR_like Catalyt 95.9 0.096 2.1E-06 42.0 9.9 107 36-152 11-129 (279)
144 COG2112 Predicted Ser/Thr prot 95.9 0.023 4.9E-07 45.5 6.0 78 36-128 26-103 (201)
145 cd06630 STKc_MEKK1 Catalytic d 95.9 0.085 1.8E-06 41.7 9.5 109 38-152 6-123 (268)
146 cd07880 STKc_p38gamma_MAPK12 C 95.9 0.2 4.2E-06 42.0 12.1 107 36-152 19-138 (343)
147 cd05609 STKc_MAST Catalytic do 95.9 0.15 3.3E-06 41.6 11.2 108 36-152 5-121 (305)
148 cd05626 STKc_LATS2 Catalytic d 95.9 0.1 2.2E-06 44.5 10.4 108 36-152 5-121 (381)
149 PF00069 Pkinase: Protein kina 95.9 0.069 1.5E-06 41.9 8.8 106 37-152 4-118 (260)
150 cd05090 PTKc_Ror1 Catalytic do 95.9 0.087 1.9E-06 42.4 9.5 104 38-152 11-144 (283)
151 cd07853 STKc_NLK Catalytic dom 95.9 0.1 2.2E-06 44.2 10.2 106 37-152 5-123 (372)
152 cd05102 PTKc_VEGFR3 Catalytic 95.9 0.095 2.1E-06 43.5 9.8 84 37-130 12-105 (338)
153 TIGR02904 spore_ysxE spore coa 95.8 0.13 2.7E-06 43.1 10.6 101 36-157 11-119 (309)
154 cd07873 STKc_PCTAIRE1 Catalyti 95.8 0.28 6E-06 39.9 12.3 105 36-152 10-124 (301)
155 cd05603 STKc_SGK2 Catalytic do 95.8 0.12 2.6E-06 42.7 10.3 105 39-152 2-116 (321)
156 cd06651 STKc_MEKK3 Catalytic d 95.8 0.14 3E-06 40.8 10.3 109 37-152 7-126 (266)
157 cd06641 STKc_MST3 Catalytic do 95.8 0.19 4E-06 40.4 11.2 107 36-152 8-121 (277)
158 cd07836 STKc_Pho85 Catalytic d 95.8 0.25 5.4E-06 39.4 11.9 105 36-152 4-120 (284)
159 cd08529 STKc_FA2-like Catalyti 95.8 0.13 2.7E-06 40.4 10.0 107 37-152 5-121 (256)
160 cd05608 STKc_GRK1 Catalytic do 95.8 0.072 1.6E-06 43.1 8.7 105 40-152 1-117 (280)
161 cd08220 STKc_Nek8 Catalytic do 95.8 0.22 4.8E-06 38.9 11.2 107 36-151 4-120 (256)
162 cd06642 STKc_STK25-YSK1 Cataly 95.8 0.072 1.6E-06 42.7 8.5 105 37-152 9-121 (277)
163 cd05112 PTKc_Itk Catalytic dom 95.8 0.3 6.5E-06 38.4 12.0 104 36-151 8-119 (256)
164 cd07832 STKc_CCRK Catalytic do 95.8 0.27 5.9E-06 39.2 11.9 105 37-152 5-119 (286)
165 cd05594 STKc_PKB_alpha Catalyt 95.8 0.13 2.8E-06 42.7 10.2 103 39-150 2-113 (325)
166 cd06632 STKc_MEKK1_plant Catal 95.7 0.19 4.1E-06 39.3 10.7 108 38-152 6-122 (258)
167 cd07844 STKc_PCTAIRE_like Cata 95.7 0.25 5.4E-06 39.7 11.7 105 36-152 9-123 (291)
168 cd06623 PKc_MAPKK_plant_like C 95.7 0.2 4.4E-06 39.3 10.8 103 37-150 6-117 (264)
169 cd05108 PTKc_EGFR Catalytic do 95.7 0.15 3.2E-06 42.0 10.4 107 36-152 11-129 (316)
170 cd08530 STKc_CNK2-like Catalyt 95.7 0.093 2E-06 41.0 8.8 106 37-152 5-123 (256)
171 cd06656 STKc_PAK3 Catalytic do 95.7 0.22 4.7E-06 40.7 11.3 106 36-152 23-135 (297)
172 cd05036 PTKc_ALK_LTK Catalytic 95.7 0.18 3.8E-06 40.5 10.6 106 36-152 10-136 (277)
173 cd05575 STKc_SGK Catalytic dom 95.7 0.14 2.9E-06 42.5 10.1 105 39-152 2-116 (323)
174 cd07860 STKc_CDK2_3 Catalytic 95.7 0.21 4.5E-06 40.0 10.9 106 36-152 4-120 (284)
175 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 95.7 0.25 5.4E-06 39.6 11.3 105 36-152 8-128 (284)
176 cd05621 STKc_ROCK2 Catalytic d 95.7 0.18 3.8E-06 43.1 11.0 109 36-152 47-162 (370)
177 cd06609 STKc_MST3_like Catalyt 95.7 0.23 4.9E-06 39.6 11.0 106 37-152 6-118 (274)
178 cd05056 PTKc_FAK Catalytic dom 95.6 0.26 5.7E-06 39.2 11.3 106 37-152 11-127 (270)
179 cd05060 PTKc_Syk_like Catalyti 95.6 0.22 4.8E-06 39.3 10.8 104 39-152 2-115 (257)
180 cd06648 STKc_PAK_II Catalytic 95.6 0.34 7.3E-06 39.2 12.1 105 36-152 23-135 (285)
181 cd07872 STKc_PCTAIRE2 Catalyti 95.6 0.37 8E-06 39.4 12.4 105 36-152 10-124 (309)
182 cd05611 STKc_Rim15_like Cataly 95.6 0.15 3.2E-06 40.3 9.7 107 38-152 2-117 (260)
183 cd05596 STKc_ROCK Catalytic do 95.6 0.24 5.1E-06 42.2 11.5 109 36-152 47-162 (370)
184 PLN00009 cyclin-dependent kina 95.6 0.36 7.8E-06 39.0 12.1 106 36-152 6-122 (294)
185 cd05622 STKc_ROCK1 Catalytic d 95.6 0.2 4.4E-06 42.7 11.1 109 36-152 47-162 (371)
186 cd06657 STKc_PAK4 Catalytic do 95.6 0.27 5.8E-06 40.2 11.4 105 37-152 25-136 (292)
187 cd06626 STKc_MEKK4 Catalytic d 95.6 0.27 5.8E-06 38.7 11.0 106 37-152 5-119 (264)
188 cd06620 PKc_MAPKK_Byr1_like Ca 95.6 0.15 3.3E-06 41.1 9.7 104 37-150 10-121 (284)
189 COG0478 RIO-like serine/threon 95.5 0.06 1.3E-06 45.7 7.4 106 38-148 97-218 (304)
190 cd06653 STKc_MEKK3_like_1 Cata 95.5 0.32 7E-06 38.6 11.4 109 37-152 7-126 (264)
191 cd07841 STKc_CDK7 Catalytic do 95.5 0.18 3.9E-06 40.7 10.1 109 37-152 5-122 (298)
192 cd07845 STKc_CDK10 Catalytic d 95.5 0.35 7.6E-06 39.5 11.8 106 36-152 11-128 (309)
193 cd05118 STKc_CMGC Catalytic do 95.5 0.24 5.3E-06 39.3 10.6 105 37-152 4-118 (283)
194 cd07847 STKc_CDKL1_4 Catalytic 95.5 0.37 7.9E-06 38.4 11.6 107 37-152 6-120 (286)
195 cd05607 STKc_GRK7 Catalytic do 95.5 0.28 6.1E-06 39.5 10.9 104 40-152 1-115 (277)
196 cd07840 STKc_CDK9_like Catalyt 95.4 0.45 9.8E-06 37.8 12.0 106 37-152 4-120 (287)
197 cd07856 STKc_Sty1_Hog1 Catalyt 95.4 0.33 7.1E-06 40.5 11.6 107 36-152 14-128 (328)
198 PTZ00426 cAMP-dependent protei 95.4 0.28 6E-06 41.4 11.2 108 36-152 34-151 (340)
199 cd05048 PTKc_Ror Catalytic Dom 95.4 0.2 4.4E-06 40.0 9.9 105 37-152 10-144 (283)
200 cd05052 PTKc_Abl Catalytic dom 95.4 0.39 8.4E-06 38.1 11.5 105 36-152 10-124 (263)
201 cd06646 STKc_MAP4K5 Catalytic 95.4 0.33 7.1E-06 38.5 11.0 106 36-152 13-126 (267)
202 cd05601 STKc_CRIK Catalytic do 95.4 0.13 2.8E-06 42.6 9.0 107 36-151 5-121 (330)
203 cd05148 PTKc_Srm_Brk Catalytic 95.4 0.24 5.2E-06 39.0 10.2 104 37-152 11-124 (261)
204 cd05087 PTKc_Aatyk1_Aatyk3 Cat 95.4 0.15 3.2E-06 40.7 9.0 103 39-152 2-120 (269)
205 cd07850 STKc_JNK Catalytic dom 95.4 0.24 5.3E-06 41.5 10.7 106 36-152 20-138 (353)
206 PHA03212 serine/threonine kina 95.4 0.33 7.2E-06 41.9 11.8 98 36-152 96-202 (391)
207 cd05577 STKc_GRK Catalytic dom 95.4 0.33 7.1E-06 38.9 11.0 105 40-152 1-115 (277)
208 cd06639 STKc_myosinIIIB Cataly 95.4 0.45 9.7E-06 38.3 11.9 109 32-152 21-148 (291)
209 PLN00034 mitogen-activated pro 95.4 0.062 1.3E-06 45.2 7.0 106 36-152 78-188 (353)
210 cd05104 PTKc_Kit Catalytic dom 95.4 0.16 3.5E-06 43.3 9.7 83 37-129 40-131 (375)
211 cd06605 PKc_MAPKK Catalytic do 95.3 0.088 1.9E-06 41.6 7.5 104 37-150 6-118 (265)
212 cd05604 STKc_SGK3 Catalytic do 95.3 0.27 5.8E-06 40.8 10.7 106 39-152 2-116 (325)
213 cd08219 STKc_Nek3 Catalytic do 95.3 0.41 8.9E-06 37.6 11.3 105 37-152 5-120 (255)
214 cd05586 STKc_Sck1_like Catalyt 95.3 0.29 6.2E-06 40.6 10.9 106 40-152 1-116 (330)
215 cd07876 STKc_JNK2 Catalytic do 95.3 0.18 4E-06 42.3 9.8 107 36-152 25-143 (359)
216 cd08227 PK_STRAD_alpha Pseudok 95.3 0.2 4.4E-06 41.4 9.9 106 38-152 4-121 (327)
217 cd05109 PTKc_HER2 Catalytic do 95.3 0.35 7.5E-06 38.7 11.0 106 36-152 11-129 (279)
218 cd05065 PTKc_EphR_B Catalytic 95.3 0.5 1.1E-05 37.5 11.8 106 36-152 8-126 (269)
219 smart00221 STYKc Protein kinas 95.3 0.52 1.1E-05 35.7 11.5 105 37-151 4-117 (225)
220 cd05042 PTKc_Aatyk Catalytic d 95.3 0.36 7.8E-06 38.3 10.9 103 39-152 2-120 (269)
221 cd05625 STKc_LATS1 Catalytic d 95.3 0.2 4.3E-06 42.6 9.9 108 36-152 5-121 (382)
222 cd06627 STKc_Cdc7_like Catalyt 95.3 0.45 9.7E-06 37.0 11.2 107 37-152 5-119 (254)
223 cd05101 PTKc_FGFR2 Catalytic d 95.3 0.34 7.3E-06 39.5 10.9 108 36-152 19-157 (304)
224 cd07855 STKc_ERK5 Catalytic do 95.2 0.2 4.2E-06 41.7 9.6 105 37-152 10-127 (334)
225 cd05047 PTKc_Tie Catalytic dom 95.2 0.31 6.8E-06 38.9 10.5 104 39-152 2-132 (270)
226 cd06628 STKc_MAPKKK_Byr2_like 95.2 0.61 1.3E-05 36.8 12.0 110 38-152 6-126 (267)
227 cd05066 PTKc_EphR_A Catalytic 95.2 0.53 1.1E-05 37.4 11.6 105 37-152 9-126 (267)
228 cd06655 STKc_PAK2 Catalytic do 95.2 0.58 1.3E-05 38.2 12.1 106 36-152 23-135 (296)
229 cd05122 PKc_STE Catalytic doma 95.2 0.3 6.5E-06 37.6 9.9 103 37-151 5-117 (253)
230 KOG3021 Predicted kinase [Gene 95.1 0.08 1.7E-06 44.0 6.7 88 41-152 21-113 (313)
231 cd05606 STKc_beta_ARK Catalyti 95.1 0.4 8.7E-06 38.6 11.0 107 40-152 2-117 (278)
232 cd05631 STKc_GRK4 Catalytic do 95.1 0.34 7.3E-06 39.2 10.5 109 36-152 4-122 (285)
233 cd06621 PKc_MAPKK_Pek1_like Ca 95.1 0.21 4.5E-06 40.4 9.2 107 36-152 5-125 (287)
234 cd08528 STKc_Nek10 Catalytic d 95.1 0.11 2.4E-06 41.2 7.5 111 37-150 5-131 (269)
235 PF07714 Pkinase_Tyr: Protein 95.1 0.15 3.3E-06 40.8 8.3 105 37-152 4-123 (259)
236 PRK13184 pknD serine/threonine 95.1 0.26 5.7E-06 47.9 11.1 108 36-152 6-133 (932)
237 cd05572 STKc_cGK_PKG Catalytic 95.1 0.45 9.9E-06 37.5 10.8 105 40-152 1-113 (262)
238 cd08223 STKc_Nek4 Catalytic do 95.0 0.34 7.3E-06 38.0 10.0 107 37-152 5-122 (257)
239 cd07830 STKc_MAK_like Catalyti 95.0 0.18 3.9E-06 40.2 8.5 106 37-152 4-119 (283)
240 cd06613 STKc_MAP4K3_like Catal 95.0 0.62 1.3E-05 36.5 11.5 106 36-152 7-121 (262)
241 cd05602 STKc_SGK1 Catalytic do 95.0 0.27 5.8E-06 40.7 9.8 106 39-152 2-116 (325)
242 cd07849 STKc_ERK1_2_like Catal 95.0 0.46 9.9E-06 39.5 11.2 105 36-152 9-126 (336)
243 cd05581 STKc_PDK1 Catalytic do 95.0 0.26 5.6E-06 39.0 9.3 107 37-152 6-122 (280)
244 cd08221 STKc_Nek9 Catalytic do 95.0 0.58 1.2E-05 36.7 11.2 108 36-152 4-121 (256)
245 cd07833 STKc_CDKL Catalytic do 95.0 0.45 9.8E-06 37.9 10.8 106 37-152 6-120 (288)
246 cd07875 STKc_JNK1 Catalytic do 95.0 0.28 6.1E-06 41.3 10.0 107 36-152 28-146 (364)
247 cd07842 STKc_CDK8_like Catalyt 95.0 0.8 1.7E-05 37.1 12.4 107 37-152 5-128 (316)
248 cd07835 STKc_CDK1_like Catalyt 95.0 0.54 1.2E-05 37.6 11.2 106 37-152 4-119 (283)
249 cd07838 STKc_CDK4_6_like Catal 95.0 0.92 2E-05 36.0 12.5 108 37-152 4-127 (287)
250 cd06608 STKc_myosinIII_like Ca 95.0 0.65 1.4E-05 36.5 11.4 105 36-152 10-133 (275)
251 cd05088 PTKc_Tie2 Catalytic do 94.9 0.4 8.6E-06 39.2 10.5 106 37-152 12-144 (303)
252 cd05076 PTK_Tyk2_rpt1 Pseudoki 94.9 0.44 9.6E-06 38.4 10.6 68 80-152 62-137 (274)
253 cd06624 STKc_ASK Catalytic dom 94.9 0.43 9.2E-06 37.9 10.4 105 36-152 12-128 (268)
254 cd07843 STKc_CDC2L1 Catalytic 94.9 0.47 1E-05 38.2 10.6 105 37-152 10-126 (293)
255 cd07858 STKc_TEY_MAPK_plant Ca 94.9 0.38 8.3E-06 40.0 10.4 106 36-152 9-128 (337)
256 cd06625 STKc_MEKK3_like Cataly 94.9 0.39 8.4E-06 37.8 9.9 108 37-151 7-123 (263)
257 cd05597 STKc_DMPK_like Catalyt 94.9 0.5 1.1E-05 39.4 11.0 108 36-152 5-122 (331)
258 cd05050 PTKc_Musk Catalytic do 94.8 0.43 9.2E-06 38.4 10.3 106 36-152 9-150 (288)
259 cd06614 STKc_PAK Catalytic dom 94.8 0.35 7.5E-06 38.9 9.7 104 36-152 23-136 (286)
260 cd05095 PTKc_DDR2 Catalytic do 94.8 0.36 7.8E-06 39.2 9.8 105 37-152 10-150 (296)
261 cd05579 STKc_MAST_like Catalyt 94.8 0.28 6E-06 38.3 8.9 104 40-152 1-113 (265)
262 cd05632 STKc_GRK5 Catalytic do 94.8 0.58 1.2E-05 37.9 10.9 108 37-152 5-122 (285)
263 cd05086 PTKc_Aatyk2 Catalytic 94.8 0.27 5.8E-06 39.3 8.9 104 39-152 2-119 (268)
264 cd07874 STKc_JNK3 Catalytic do 94.7 0.25 5.5E-06 41.4 8.9 106 36-152 21-139 (355)
265 cd05055 PTKc_PDGFR Catalytic d 94.7 0.69 1.5E-05 37.9 11.4 108 36-152 39-161 (302)
266 cd08218 STKc_Nek1 Catalytic do 94.7 0.65 1.4E-05 36.4 10.8 106 37-152 5-121 (256)
267 cd06658 STKc_PAK5 Catalytic do 94.7 0.27 5.9E-06 40.1 8.9 106 36-152 26-138 (292)
268 cd06619 PKc_MKK5 Catalytic dom 94.7 0.29 6.2E-06 39.4 8.8 106 37-152 6-115 (279)
269 KOG0610 Putative serine/threon 94.6 0.099 2.1E-06 46.5 6.4 103 36-150 81-197 (459)
270 cd05063 PTKc_EphR_A2 Catalytic 94.6 0.63 1.4E-05 36.8 10.7 106 36-152 9-127 (268)
271 cd05046 PTK_CCK4 Pseudokinase 94.6 0.7 1.5E-05 36.7 11.0 106 36-152 9-137 (275)
272 cd05051 PTKc_DDR Catalytic dom 94.6 0.39 8.4E-06 38.7 9.6 107 36-152 9-150 (296)
273 cd05075 PTKc_Axl Catalytic dom 94.6 0.23 5E-06 39.4 8.1 105 38-152 5-132 (272)
274 cd07870 STKc_PFTAIRE2 Catalyti 94.6 0.96 2.1E-05 36.4 11.8 105 36-152 9-123 (291)
275 cd05630 STKc_GRK6 Catalytic do 94.6 0.63 1.4E-05 37.7 10.8 108 37-152 5-122 (285)
276 cd06647 STKc_PAK_I Catalytic d 94.6 0.77 1.7E-05 37.3 11.3 106 36-152 23-135 (293)
277 cd05043 PTK_Ryk Pseudokinase d 94.5 0.7 1.5E-05 36.9 10.8 105 37-152 11-137 (280)
278 KOG0605 NDR and related serine 94.5 0.38 8.2E-06 43.9 9.9 120 36-164 145-294 (550)
279 cd05098 PTKc_FGFR1 Catalytic d 94.5 0.81 1.8E-05 37.3 11.3 107 36-152 22-160 (307)
280 cd05097 PTKc_DDR_like Catalyti 94.5 0.52 1.1E-05 38.2 10.0 104 38-152 11-149 (295)
281 cd05624 STKc_MRCK_beta Catalyt 94.5 0.84 1.8E-05 38.0 11.5 107 36-151 5-121 (331)
282 cd06637 STKc_TNIK Catalytic do 94.5 0.59 1.3E-05 37.0 10.2 104 37-152 11-131 (272)
283 cd05077 PTK_Jak1_rpt1 Pseudoki 94.5 0.88 1.9E-05 36.3 11.2 102 39-152 2-125 (262)
284 cd06617 PKc_MKK3_6 Catalytic d 94.4 0.62 1.4E-05 37.1 10.2 105 36-151 5-122 (283)
285 KOG1187 Serine/threonine prote 94.4 0.59 1.3E-05 40.5 10.7 104 38-152 81-194 (361)
286 PHA03211 serine/threonine kina 94.4 0.73 1.6E-05 41.1 11.5 98 36-152 173-280 (461)
287 cd07852 STKc_MAPK15 Catalytic 94.3 0.8 1.7E-05 38.0 11.0 105 38-152 13-127 (337)
288 cd05105 PTKc_PDGFR_alpha Catal 94.3 0.59 1.3E-05 40.6 10.5 84 36-129 41-133 (400)
289 cd07857 STKc_MPK1 Catalytic do 94.3 1.3 2.8E-05 36.7 12.1 106 37-152 5-125 (332)
290 cd05605 STKc_GRK4_like Catalyt 94.3 0.65 1.4E-05 37.5 10.2 108 37-152 5-122 (285)
291 PTZ00284 protein kinase; Provi 94.2 0.81 1.8E-05 40.2 11.4 104 36-150 133-249 (467)
292 PRK04750 ubiB putative ubiquin 94.2 0.64 1.4E-05 42.6 11.0 109 34-144 121-271 (537)
293 cd05040 PTKc_Ack_like Catalyti 94.2 0.51 1.1E-05 37.0 9.2 103 39-152 2-117 (257)
294 cd07846 STKc_CDKL2_3 Catalytic 94.2 0.69 1.5E-05 36.9 10.1 107 36-152 5-120 (286)
295 cd08225 STKc_Nek5 Catalytic do 94.2 1.1 2.4E-05 35.0 11.0 107 37-152 5-121 (257)
296 PHA03209 serine/threonine kina 94.2 0.81 1.7E-05 38.7 10.9 98 36-152 70-177 (357)
297 cd07865 STKc_CDK9 Catalytic do 94.2 1.8 4E-05 34.8 12.6 107 36-152 16-139 (310)
298 PTZ00024 cyclin-dependent prot 94.1 1 2.2E-05 37.2 11.2 109 38-152 15-139 (335)
299 cd05061 PTKc_InsR Catalytic do 94.1 0.92 2E-05 36.6 10.7 106 36-152 10-139 (288)
300 PRK10345 hypothetical protein; 94.1 1.3 2.9E-05 35.4 11.4 108 36-151 6-124 (210)
301 cd05110 PTKc_HER4 Catalytic do 94.1 0.44 9.5E-06 38.9 8.8 107 36-152 11-129 (303)
302 cd06633 STKc_TAO3 Catalytic do 94.0 1.2 2.7E-05 36.5 11.5 108 36-152 25-141 (313)
303 cd07834 STKc_MAPK Catalytic do 94.0 0.65 1.4E-05 38.2 9.8 105 37-152 5-123 (330)
304 cd06636 STKc_MAP4K4_6 Catalyti 94.0 1 2.3E-05 35.9 10.8 105 36-152 20-141 (282)
305 PTZ00266 NIMA-related protein 94.0 0.81 1.8E-05 45.0 11.7 107 36-151 17-137 (1021)
306 cd05049 PTKc_Trk Catalytic dom 94.0 0.77 1.7E-05 36.5 9.9 104 37-151 10-141 (280)
307 cd05078 PTK_Jak2_Jak3_rpt1 Pse 94.0 0.33 7.1E-06 38.5 7.7 103 39-152 2-120 (258)
308 cd06618 PKc_MKK7 Catalytic dom 93.9 0.51 1.1E-05 38.3 8.9 106 36-150 19-132 (296)
309 cd06645 STKc_MAP4K3 Catalytic 93.9 0.96 2.1E-05 35.7 10.2 106 36-152 13-126 (267)
310 cd07866 STKc_BUR1 Catalytic do 93.8 1.2 2.7E-05 35.8 10.9 107 36-152 12-135 (311)
311 cd05080 PTKc_Tyk2_rpt2 Catalyt 93.8 1.5 3.3E-05 35.1 11.4 106 36-152 8-127 (283)
312 cd08217 STKc_Nek2 Catalytic do 93.8 0.48 1E-05 36.9 8.3 103 37-150 5-123 (265)
313 cd07854 STKc_MAPK4_6 Catalytic 93.7 1.1 2.4E-05 37.4 10.8 104 36-152 9-134 (342)
314 cd06643 STKc_SLK Catalytic dom 93.7 1.1 2.3E-05 35.9 10.3 104 37-152 10-123 (282)
315 cd08229 STKc_Nek7 Catalytic do 93.6 0.74 1.6E-05 36.3 9.2 107 38-152 8-126 (267)
316 cd06629 STKc_MAPKKK_Bck1_like 93.6 0.99 2.1E-05 35.8 10.0 111 37-152 6-128 (272)
317 cd05610 STKc_MASTL Catalytic d 93.6 1 2.2E-05 42.0 11.2 108 36-152 8-124 (669)
318 cd05033 PTKc_EphR Catalytic do 93.6 2.3 5E-05 33.6 12.0 106 36-152 8-126 (266)
319 cd05103 PTKc_VEGFR2 Catalytic 93.6 0.66 1.4E-05 38.8 9.2 85 36-130 11-105 (343)
320 cd07839 STKc_CDK5 Catalytic do 93.5 1 2.2E-05 35.9 10.0 106 37-152 5-119 (284)
321 cd05123 STKc_AGC Catalytic dom 93.5 0.58 1.3E-05 36.4 8.3 104 40-151 1-112 (250)
322 cd06612 STKc_MST1_2 Catalytic 93.5 1.5 3.3E-05 34.1 10.7 102 37-151 8-118 (256)
323 cd06644 STKc_STK10_LOK Catalyt 93.5 2.1 4.5E-05 34.5 11.8 105 36-152 16-130 (292)
324 cd05099 PTKc_FGFR4 Catalytic d 93.5 1.2 2.6E-05 36.5 10.5 107 36-152 16-154 (314)
325 cd05111 PTK_HER3 Pseudokinase 93.5 1.3 2.7E-05 35.7 10.5 110 36-152 11-129 (279)
326 cd05623 STKc_MRCK_alpha Cataly 93.5 1.2 2.7E-05 36.9 10.7 108 36-152 5-122 (332)
327 KOG0197 Tyrosine kinases [Sign 93.5 0.64 1.4E-05 41.9 9.3 102 37-151 211-322 (468)
328 KOG0192 Tyrosine kinase specif 93.4 1.3 2.8E-05 38.6 10.9 103 40-152 49-162 (362)
329 cd05032 PTKc_InsR_like Catalyt 93.3 1.5 3.2E-05 34.8 10.5 106 36-152 10-139 (277)
330 cd06622 PKc_MAPKK_PBS2_like Ca 93.2 0.71 1.5E-05 37.0 8.6 103 37-150 6-120 (286)
331 cd05062 PTKc_IGF-1R Catalytic 93.2 1.3 2.9E-05 35.2 10.1 106 36-152 10-139 (277)
332 cd05092 PTKc_TrkA Catalytic do 93.1 0.91 2E-05 36.4 9.1 105 36-152 9-142 (280)
333 cd05106 PTKc_CSF-1R Catalytic 93.1 0.76 1.7E-05 39.2 9.0 84 36-129 42-134 (374)
334 KOG1235 Predicted unusual prot 93.1 0.44 9.5E-06 43.7 7.8 125 34-159 163-327 (538)
335 PLN00113 leucine-rich repeat r 93.0 0.5 1.1E-05 45.2 8.5 99 37-151 695-799 (968)
336 cd07867 STKc_CDC2L6 Catalytic 92.9 2.6 5.6E-05 34.2 11.6 101 38-152 7-128 (317)
337 cd07864 STKc_CDK12 Catalytic d 92.9 2.5 5.4E-05 34.0 11.3 106 37-152 12-136 (302)
338 KOG0595 Serine/threonine-prote 92.8 1.5 3.2E-05 39.0 10.3 103 38-150 16-127 (429)
339 cd05064 PTKc_EphR_A10 Catalyti 92.8 3.5 7.7E-05 32.7 12.0 105 37-152 10-127 (266)
340 PHA03390 pk1 serine/threonine- 92.7 1.5 3.3E-05 35.1 9.8 98 39-152 23-129 (267)
341 cd06659 STKc_PAK6 Catalytic do 92.7 1.7 3.6E-05 35.5 10.2 105 36-152 25-137 (297)
342 cd05045 PTKc_RET Catalytic dom 92.6 1.9 4.1E-05 34.7 10.3 104 38-152 6-147 (290)
343 cd05089 PTKc_Tie1 Catalytic do 92.6 1.7 3.6E-05 35.3 10.1 106 37-152 7-139 (297)
344 PTZ00267 NIMA-related protein 92.6 0.79 1.7E-05 40.6 8.7 104 36-151 71-188 (478)
345 KOG1164 Casein kinase (serine/ 92.6 1.9 4.1E-05 36.2 10.6 109 36-151 22-141 (322)
346 cd05100 PTKc_FGFR3 Catalytic d 92.5 1.8 4E-05 35.8 10.3 107 37-152 17-154 (334)
347 cd05093 PTKc_TrkB Catalytic do 92.4 1.3 2.7E-05 35.8 9.0 105 36-152 9-140 (288)
348 cd07878 STKc_p38beta_MAPK11 Ca 92.4 1.7 3.7E-05 36.1 10.0 106 36-152 19-138 (343)
349 cd08216 PK_STRAD Pseudokinase 92.3 2 4.4E-05 34.9 10.2 97 47-152 17-121 (314)
350 cd05578 STKc_Yank1 Catalytic d 92.3 1.4 3.1E-05 34.6 9.0 108 37-152 5-120 (258)
351 cd08222 STKc_Nek11 Catalytic d 92.2 0.56 1.2E-05 37.0 6.6 109 38-152 6-126 (260)
352 cd05035 PTKc_Axl_like Catalyti 92.2 2.4 5.2E-05 33.4 10.2 105 38-152 5-133 (273)
353 cd06607 STKc_TAO Catalytic dom 92.2 1.8 4E-05 35.2 9.8 108 36-152 19-135 (307)
354 cd06635 STKc_TAO1 Catalytic do 92.1 3.1 6.6E-05 34.2 11.2 107 36-152 29-145 (317)
355 cd07829 STKc_CDK_like Catalyti 92.1 1 2.2E-05 35.7 8.0 106 37-152 4-118 (282)
356 cd05094 PTKc_TrkC Catalytic do 92.0 1.3 2.9E-05 35.7 8.7 104 37-152 10-143 (291)
357 cd05044 PTKc_c-ros Catalytic d 92.0 0.8 1.7E-05 36.2 7.2 104 39-152 2-126 (269)
358 KOG1165 Casein kinase (serine/ 92.0 1.4 3E-05 38.7 9.0 102 38-152 34-144 (449)
359 cd05058 PTKc_Met_Ron Catalytic 91.8 1.9 4E-05 33.9 9.2 104 39-152 2-118 (262)
360 KOG0032 Ca2+/calmodulin-depend 91.8 1.7 3.7E-05 38.1 9.6 105 38-151 41-154 (382)
361 cd07879 STKc_p38delta_MAPK13 C 91.7 1.3 2.8E-05 37.0 8.6 105 36-152 19-137 (342)
362 cd06616 PKc_MKK4 Catalytic dom 91.7 2.7 5.8E-05 33.6 10.1 106 37-150 9-125 (288)
363 cd05053 PTKc_FGFR Catalytic do 91.7 2 4.2E-05 34.5 9.3 107 36-152 16-152 (293)
364 PF01633 Choline_kinase: Choli 91.4 0.45 9.6E-06 37.3 5.1 63 82-153 21-83 (211)
365 KOG0667 Dual-specificity tyros 91.3 2.2 4.8E-05 39.6 10.1 104 36-150 190-307 (586)
366 COG1718 RIO1 Serine/threonine 91.2 2.2 4.7E-05 35.9 9.1 63 84-149 118-183 (268)
367 cd06634 STKc_TAO2 Catalytic do 91.0 3.9 8.5E-05 33.4 10.6 108 36-152 19-135 (308)
368 cd08226 PK_STRAD_beta Pseudoki 91.0 1.7 3.8E-05 35.8 8.5 104 39-152 5-121 (328)
369 cd05124 AFK Actin-Fragmin Kina 90.8 1.8 3.8E-05 35.8 8.2 30 35-64 2-31 (238)
370 cd05576 STKc_RPK118_like Catal 90.7 3 6.5E-05 32.7 9.3 93 43-152 4-105 (237)
371 cd07851 STKc_p38 Catalytic dom 90.7 2 4.3E-05 35.8 8.7 107 36-152 19-138 (343)
372 cd07877 STKc_p38alpha_MAPK14 C 90.6 5.7 0.00012 33.2 11.4 107 36-152 21-140 (345)
373 PHA03207 serine/threonine kina 90.6 4.4 9.5E-05 34.7 10.9 100 36-152 96-205 (392)
374 cd05107 PTKc_PDGFR_beta Cataly 90.6 3.7 7.9E-05 35.8 10.5 84 37-130 42-134 (401)
375 PTZ00036 glycogen synthase kin 90.5 4.6 9.9E-05 35.4 11.2 104 36-152 70-190 (440)
376 cd05074 PTKc_Tyro3 Catalytic d 90.0 4.6 9.9E-05 31.9 9.9 105 38-152 5-133 (273)
377 cd05091 PTKc_Ror2 Catalytic do 90.0 2.3 5E-05 33.9 8.2 105 37-152 10-144 (283)
378 KOG0583 Serine/threonine prote 89.9 6 0.00013 34.4 11.2 109 36-151 21-139 (370)
379 PF06176 WaaY: Lipopolysacchar 89.6 1.6 3.5E-05 35.8 7.0 104 36-152 35-155 (229)
380 cd05054 PTKc_VEGFR Catalytic d 89.2 3.6 7.7E-05 34.5 9.1 83 37-129 12-104 (337)
381 PTZ00283 serine/threonine prot 88.7 2.8 6.1E-05 37.5 8.6 108 36-152 36-163 (496)
382 smart00220 S_TKc Serine/Threon 88.5 4.6 9.9E-05 30.5 8.6 94 47-151 4-106 (244)
383 KOG2686 Choline kinase [Cell w 87.5 2.1 4.5E-05 37.5 6.7 110 31-151 39-150 (366)
384 cd07868 STKc_CDK8 Catalytic do 87.2 15 0.00032 29.9 11.5 101 38-152 7-128 (317)
385 COG0661 AarF Predicted unusual 86.8 7 0.00015 35.8 10.0 114 33-147 126-279 (517)
386 PLN03225 Serine/threonine-prot 86.4 4.3 9.4E-05 37.2 8.5 99 36-151 136-274 (566)
387 KOG4720 Ethanolamine kinase [L 85.8 3 6.5E-05 36.2 6.6 105 31-152 80-187 (391)
388 KOG1163 Casein kinase (serine/ 85.6 11 0.00025 31.9 9.8 105 36-151 19-130 (341)
389 KOG0615 Serine/threonine prote 85.2 13 0.00028 33.4 10.5 113 35-151 175-295 (475)
390 KOG0198 MEKK and related serin 85.1 9.5 0.00021 32.7 9.4 105 36-151 21-136 (313)
391 KOG0661 MAPK related serine/th 84.7 0.92 2E-05 41.2 3.1 106 36-152 14-130 (538)
392 KOG0594 Protein kinase PCTAIRE 84.6 6.4 0.00014 34.0 8.1 107 36-152 15-140 (323)
393 KOG0587 Traf2- and Nck-interac 83.9 18 0.00038 35.4 11.3 79 31-119 17-105 (953)
394 PLN03224 probable serine/threo 83.8 15 0.00033 33.4 10.6 115 36-152 149-329 (507)
395 KOG0194 Protein tyrosine kinas 82.6 9.4 0.0002 34.7 8.7 104 38-150 163-280 (474)
396 KOG1989 ARK protein kinase fam 79.1 8.5 0.00018 36.8 7.5 101 38-152 43-164 (738)
397 TIGR02905 spore_yutH spore coa 78.8 23 0.0005 29.7 9.5 88 48-160 21-117 (313)
398 KOG0598 Ribosomal protein S6 k 76.4 28 0.00061 30.5 9.3 109 36-152 29-145 (357)
399 PHA02882 putative serine/threo 75.9 25 0.00055 28.4 8.7 113 33-152 12-146 (294)
400 PF10309 DUF2414: Protein of u 73.6 7.9 0.00017 25.4 4.1 38 6-50 13-50 (62)
401 KOG1094 Discoidin domain recep 71.7 18 0.0004 34.2 7.4 102 35-148 541-653 (807)
402 KOG0663 Protein kinase PITSLRE 71.3 24 0.00051 31.2 7.6 105 36-150 80-195 (419)
403 COG3178 Predicted phosphotrans 70.9 2.7 5.9E-05 36.3 1.8 53 96-152 81-133 (351)
404 KOG0592 3-phosphoinositide-dep 69.7 24 0.00052 32.8 7.6 106 37-152 78-194 (604)
405 KOG1290 Serine/threonine prote 65.3 43 0.00092 31.0 8.2 132 11-156 55-211 (590)
406 KOG2268 Serine/threonine prote 65.3 9.4 0.0002 33.9 4.0 105 40-151 100-221 (465)
407 PHA03210 serine/threonine kina 64.9 39 0.00084 30.2 8.1 111 36-152 152-287 (501)
408 KOG0658 Glycogen synthase kina 64.0 31 0.00067 30.3 6.9 103 36-151 28-144 (364)
409 KOG0581 Mitogen-activated prot 63.7 53 0.0012 28.9 8.3 104 36-150 83-196 (364)
410 KOG0662 Cyclin-dependent kinas 62.3 29 0.00062 28.3 6.0 100 36-143 6-108 (292)
411 PF14633 SH2_2: SH2 domain; PD 61.3 14 0.00031 30.1 4.2 42 4-54 39-82 (220)
412 PF03109 ABC1: ABC1 family; I 61.2 3.5 7.6E-05 30.0 0.6 59 33-101 12-71 (119)
413 PF06437 ISN1: IMP-specific 5' 60.2 6.9 0.00015 34.7 2.3 62 12-86 204-265 (408)
414 KOG0611 Predicted serine/threo 58.5 36 0.00078 31.1 6.5 95 38-141 59-158 (668)
415 KOG0608 Warts/lats-like serine 53.9 14 0.00031 35.4 3.3 51 83-138 678-731 (1034)
416 KOG2270 Serine/threonine prote 51.1 23 0.0005 32.0 4.0 70 42-119 155-248 (520)
417 PF11588 DUF3243: Protein of u 46.6 7.9 0.00017 26.8 0.4 28 120-147 6-44 (81)
418 PF09192 Act-Frag_cataly: Acti 44.1 76 0.0016 26.8 6.0 30 36-65 29-63 (275)
419 KOG1166 Mitotic checkpoint ser 42.0 1.2E+02 0.0027 30.1 7.8 104 38-151 704-813 (974)
420 KOG0607 MAP kinase-interacting 40.3 48 0.001 29.3 4.3 73 77-151 118-195 (463)
421 KOG0577 Serine/threonine prote 40.0 44 0.00095 32.0 4.2 109 36-152 30-146 (948)
422 COG1923 Hfq Uncharacterized ho 38.8 37 0.00081 23.3 2.7 28 41-68 36-64 (77)
423 KOG1167 Serine/threonine prote 38.7 46 0.001 29.8 4.0 107 33-151 37-151 (418)
424 COG3231 Aph Aminoglycoside pho 38.5 2.4E+02 0.0052 23.7 9.5 98 38-151 24-127 (266)
425 KOG4721 Serine/threonine prote 38.4 41 0.00088 32.0 3.8 90 36-151 128-231 (904)
426 KOG0671 LAMMER dual specificit 38.1 2.1E+02 0.0045 25.6 7.9 70 78-150 129-210 (415)
427 COG3570 StrB Streptomycin 6-ki 35.5 32 0.00069 28.6 2.3 102 34-151 11-115 (274)
428 PF11454 DUF3016: Protein of u 35.3 93 0.002 23.7 4.8 47 44-91 87-137 (141)
429 TIGR02457 TreS_Cterm trehalose 34.9 3.3E+02 0.0071 25.1 9.1 103 35-151 168-300 (528)
430 KOG0600 Cdc2-related protein k 31.5 3.1E+02 0.0067 25.5 8.1 105 36-151 121-237 (560)
431 cd03527 RuBisCO_small Ribulose 29.6 54 0.0012 23.5 2.5 46 73-118 48-96 (99)
432 PRK01379 cyaY frataxin-like pr 28.7 69 0.0015 23.0 3.0 51 1-64 1-55 (103)
433 KOG0580 Serine/threonine prote 28.6 1E+02 0.0022 26.1 4.3 47 102-150 89-142 (281)
434 PF10009 DUF2252: Uncharacteri 28.6 2.5E+02 0.0054 24.7 7.0 106 43-154 228-346 (385)
435 PF09162 Tap-RNA_bind: Tap, RN 28.1 59 0.0013 22.8 2.4 32 87-118 23-55 (88)
436 KOG4257 Focal adhesion tyrosin 28.1 5.8E+02 0.013 25.0 10.3 103 38-151 395-510 (974)
437 PRK10963 hypothetical protein; 28.0 36 0.00078 27.5 1.5 18 8-25 2-19 (223)
438 KOG0616 cAMP-dependent protein 26.7 3E+02 0.0064 24.1 6.8 105 36-152 48-164 (355)
439 KOG0200 Fibroblast/platelet-de 26.5 3.3E+02 0.0071 25.2 7.7 85 39-132 303-397 (609)
440 PF04340 DUF484: Protein of un 26.0 9.9 0.00022 30.5 -2.1 20 6-25 3-22 (225)
441 COG3137 Putative salt-induced 25.6 2.1E+02 0.0046 23.8 5.5 65 32-101 175-249 (262)
442 KOG1345 Serine/threonine kinas 25.0 67 0.0014 27.9 2.6 101 38-151 30-140 (378)
443 KOG0660 Mitogen-activated prot 24.1 1E+02 0.0023 27.0 3.7 105 36-151 26-144 (359)
444 PF00101 RuBisCO_small: Ribulo 23.1 46 0.00099 23.8 1.1 44 74-117 48-94 (99)
445 KOG2269 Serine/threonine prote 22.9 1.4E+02 0.0031 26.8 4.3 39 78-119 327-367 (531)
446 TIGR02383 Hfq RNA chaperone Hf 22.7 1.1E+02 0.0024 19.9 2.8 26 42-67 33-59 (61)
447 COG2973 TrpR Trp operon repres 22.3 30 0.00064 24.9 0.0 42 114-156 43-85 (103)
448 KOG1693 emp24/gp25L/p24 family 22.2 1.3E+02 0.0027 24.5 3.6 31 34-64 48-78 (209)
449 KOG1026 Nerve growth factor re 21.6 3E+02 0.0064 26.8 6.4 71 79-154 532-628 (774)
450 KOG0664 Nemo-like MAPK-related 21.2 60 0.0013 28.2 1.7 51 38-93 59-111 (449)
451 cd01716 Hfq Hfq, an abundant, 21.1 1.3E+02 0.0027 19.7 2.8 27 42-68 29-56 (61)
452 cd00307 RuBisCO_small_like Rib 20.5 1.8E+02 0.0038 20.1 3.6 46 73-118 31-81 (84)
No 1
>PRK12396 5-methylribose kinase; Reviewed
Probab=100.00 E-value=3.1e-48 Score=336.44 Aligned_cols=156 Identities=32% Similarity=0.503 Sum_probs=146.8
Q ss_pred CCCccccCHhhHHHHHHhC-CCcccccCCCCCcceeEeccCCceeEEEEEEeC--CCeEEEEecCccccccCCCCCCChH
Q 045250 3 FTEFRPLDDKSLLEYIKAT-PSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGT--SGSFVIKQALPYVRCIGESWPMTKE 79 (165)
Q Consensus 3 ~~~~~~l~~~~v~~Yl~~~-~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~--~gsvIvKqa~p~~r~~~~~~~l~~~ 79 (165)
|.+|++|+++++++|+++. +.++ ..++++++++||||+|+||||++. .++||||||+||+|+ +++||+|++
T Consensus 4 ~~~y~~l~~~~v~~yl~~~l~~~~-----~~~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv-~~swpL~~~ 77 (409)
T PRK12396 4 FTKYFLMEANDVIVYVKEKLSKFE-----HAKGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARI-SDEFKLSTN 77 (409)
T ss_pred cccceeCCHhHHHHHHHHhcCCCC-----CcccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhcc-CCCCCCChH
Confidence 5699999999999999985 6553 567899999999999999999986 349999999999995 799999999
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCc
Q 045250 80 RAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTT 159 (165)
Q Consensus 80 R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~ 159 (165)
|+++|+++|+.+++++|++||+||+||++++++|||||+ ++.+||++|++|+.+|.+|++||+|||++|++||||+|++
T Consensus 78 R~~~E~~aL~~~~~~~P~~VP~vy~~D~e~~~~vMEdL~-~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd~~l~~ 156 (409)
T PRK12396 78 RIRIESDVLQLEEELAPGLVPKVYLFDSVMNCCVMEDLS-DHTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMNH 156 (409)
T ss_pred HHHHHHHHHHHHHhhCCCcCCeEEEECcHHhhHHHHhCc-ccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcchhccCh
Confidence 999999999999999999999999999999999999999 6999999999999999999999999999999999999999
Q ss_pred hhhhcC
Q 045250 160 TEHKRN 165 (165)
Q Consensus 160 ~~kk~~ 165 (165)
++||+.
T Consensus 157 ~~kk~~ 162 (409)
T PRK12396 157 KEKKEL 162 (409)
T ss_pred HHHHHh
Confidence 999973
No 2
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=100.00 E-value=1.6e-41 Score=291.61 Aligned_cols=126 Identities=50% Similarity=0.824 Sum_probs=121.3
Q ss_pred EeccCCceeEEEEEEeCCC--eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250 38 KEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR 115 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME 115 (165)
+|+||||+|+||||++++| |||||||+||+|++|++||++.+|+++|+++|+.+++++|..||++|+||++++++|||
T Consensus 1 ~EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~vME 80 (370)
T TIGR01767 1 QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVTVME 80 (370)
T ss_pred CcCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccccceehHh
Confidence 4789999999999998864 89999999999988889999999999999999999999999999999999999999999
Q ss_pred cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCchhhhc
Q 045250 116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~~kk~ 164 (165)
||+ ++.+||++|++|+.+|.+|++||+|||+|||+||||+|++++||+
T Consensus 81 dL~-~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd~~~~~~~kk~ 128 (370)
T TIGR01767 81 DLS-HHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSDYALEPKVKKA 128 (370)
T ss_pred hCc-cchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCHHHHHH
Confidence 999 699999999999999999999999999999999999999999886
No 3
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=100.00 E-value=5.3e-40 Score=285.82 Aligned_cols=156 Identities=49% Similarity=0.783 Sum_probs=146.4
Q ss_pred CCCccccCHhhHHHHHH-hCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCC--eEEEEecCccccccCCCCCCChH
Q 045250 3 FTEFRPLDDKSLLEYIK-ATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKE 79 (165)
Q Consensus 3 ~~~~~~l~~~~v~~Yl~-~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g--svIvKqa~p~~r~~~~~~~l~~~ 79 (165)
+++|++|++++|++||+ ..|.+. +.+.++++++||||+|+||||++.+| ++|||||+||+|+++++|+++.+
T Consensus 1 ~~~y~~l~~~~v~~yl~~~~~~~~-----~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~e 75 (401)
T PRK09550 1 MSGYETLTEEDAVEYAALKLGLFD-----PKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLD 75 (401)
T ss_pred CCCCeeCCHhHHHHHHHHhcCCCC-----CcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHH
Confidence 57999999999999995 446553 56778999999999999999999877 89999999999988888999999
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCc
Q 045250 80 RAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTT 159 (165)
Q Consensus 80 R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~ 159 (165)
|+.+|+++|+.+++.+|..||++|+||++++++|||||+ ++.+||++|++|+.+|.+|++||++||++||+||||++++
T Consensus 76 R~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME~L~-~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd~~~~~ 154 (401)
T PRK09550 76 RARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVMEDLS-DHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSDFGLSS 154 (401)
T ss_pred HHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEEecCC-CccHHHHHHhcCCccHHHHHHHHHHHHHHHhccchhhcCh
Confidence 999999999999999999999999999999999999999 6999999999999999999999999999999999999999
Q ss_pred hhhhc
Q 045250 160 TEHKR 164 (165)
Q Consensus 160 ~~kk~ 164 (165)
++||+
T Consensus 155 ~~~~~ 159 (401)
T PRK09550 155 EEKKA 159 (401)
T ss_pred hhhhh
Confidence 98874
No 4
>PLN02756 S-methyl-5-thioribose kinase
Probab=100.00 E-value=1.3e-39 Score=283.76 Aligned_cols=164 Identities=88% Similarity=1.438 Sum_probs=153.6
Q ss_pred CCCCCccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHH
Q 045250 1 MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKER 80 (165)
Q Consensus 1 ~~~~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R 80 (165)
|.|.+|+.|+.+.+.+|+++++.+...++...+.++++++||||+|+||||++.++++||||++|++|+++++||++.+|
T Consensus 1 ~~~~~y~~l~~~~l~~yl~~~~~~~~~l~g~~~~l~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R 80 (418)
T PLN02756 1 MAFSEFRPLDEKSLVEYIKATPALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKER 80 (418)
T ss_pred CCccccccCCHHHHHHHHHHccchhhhcCCCCCCceEEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccH
Confidence 78999999999999999999877665555445678999999999999999998766999999999999888999999999
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCch
Q 045250 81 AYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTT 160 (165)
Q Consensus 81 ~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~ 160 (165)
+.+|+++|+..++++|..||++|+||+++++++||||++++.+||+.|++|..+|.++++||++||+++|+||||+++++
T Consensus 81 ~~~Ea~aL~~~~~~~p~~VPkVy~~ded~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd~~~~~~ 160 (418)
T PLN02756 81 AYFEATALREHGRLCPDHVPEVYHFDRTMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSLLYHDTT 160 (418)
T ss_pred HHHHHHHHHHhhhcCCCCCCeEEEECCCCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcchhccChh
Confidence 99999999999999999999999999999999999998458999999999999999999999999999999999999999
Q ss_pred hhhc
Q 045250 161 EHKR 164 (165)
Q Consensus 161 ~kk~ 164 (165)
+||+
T Consensus 161 ~kk~ 164 (418)
T PLN02756 161 EHKR 164 (418)
T ss_pred hhhH
Confidence 9986
No 5
>COG4857 Predicted kinase [General function prediction only]
Probab=100.00 E-value=1.7e-40 Score=276.40 Aligned_cols=159 Identities=43% Similarity=0.740 Sum_probs=141.1
Q ss_pred CCccccCHhhHHHH-HHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCC--eEEEEecCccccccCCCCCCChHH
Q 045250 4 TEFRPLDDKSLLEY-IKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKER 80 (165)
Q Consensus 4 ~~~~~l~~~~v~~Y-l~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g--svIvKqa~p~~r~~~~~~~l~~~R 80 (165)
++.+.+...+.+.| .+. .+..++|+....|+|+++||||+||||.|.+..| +.|||||+||+|++|.+||+|..|
T Consensus 3 ~~~f~~~~~Etl~~~~~~--al~~k~G~~~s~ltvkEIGDGNlNyvF~V~~~~~~ka~ivKQA~py~r~vGeswPL~l~R 80 (408)
T COG4857 3 KEVFEALSDETLSYGVNV--ALNLKIGPNKSHLTVKEIGDGNLNYVFIVEGKIGGKAAIVKQALPYVRLVGESWPLPLKR 80 (408)
T ss_pred ccchhhhhHhHhhhhhHH--HHHHHhCCCccceEEEEecCCceeEEEEEecCCCCeehhhhhhhhHHHhcCCcCCCcchH
Confidence 34444445555566 221 2223557667899999999999999999999854 999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCch
Q 045250 81 AYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTT 160 (165)
Q Consensus 81 ~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~ 160 (165)
.++|+.+|.+.++.+|..||++|+||+.++++|||||++ ++++|.+|++|+.+|+++.+||.|||+++|++||+.|.++
T Consensus 81 s~iE~~aL~rq~~~aPh~VPeIyf~De~mavivMEdls~-~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~k 159 (408)
T COG4857 81 SFIEYHALRRQNARAPHFVPEIYFFDEIMAVIVMEDLSP-HKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTK 159 (408)
T ss_pred HHHHHHHHHHhhccCCCCcceeEeecchhhhhhHhhhhH-HHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccchH
Confidence 999999999999999999999999999999999999995 9999999999999999999999999999999999999999
Q ss_pred hhhcC
Q 045250 161 EHKRN 165 (165)
Q Consensus 161 ~kk~~ 165 (165)
+||++
T Consensus 160 ~kK~~ 164 (408)
T COG4857 160 DKKAD 164 (408)
T ss_pred hHHHH
Confidence 99974
No 6
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.31 E-value=1.2e-11 Score=98.34 Aligned_cols=101 Identities=25% Similarity=0.262 Sum_probs=88.1
Q ss_pred eEEEEEEeCCCeEEEEecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHH
Q 045250 46 NFVYIVVGTSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIIL 124 (165)
Q Consensus 46 N~v~rV~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~l 124 (165)
+-++++..-+..+|+|...|+. |...-|-.+..+|++.|+++|..+... ...||.+|++|+.+..++||+++ +..+
T Consensus 10 a~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~-GV~~P~v~dvD~~~~~I~me~I~--G~~l 86 (204)
T COG3642 10 AIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA-GVPVPIVYDVDPDNGLIVMEYIE--GELL 86 (204)
T ss_pred eeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCEEEEEEeC--ChhH
Confidence 3456665444489999999998 665457789999999999999999887 88999999999999999999998 6899
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 045250 125 RKGLIAGIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 125 r~~l~~g~~~~~~a~~iG~~La~~h~~ 151 (165)
|+.+..+ .+.+++.+|..+|++|..
T Consensus 87 kd~l~~~--~~~~~r~vG~~vg~lH~~ 111 (204)
T COG3642 87 KDALEEA--RPDLLREVGRLVGKLHKA 111 (204)
T ss_pred HHHHHhc--chHHHHHHHHHHHHHHhc
Confidence 9999987 589999999999999975
No 7
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.14 E-value=4.4e-10 Score=84.73 Aligned_cols=102 Identities=18% Similarity=0.143 Sum_probs=79.3
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR 115 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME 115 (165)
.++++++|..|.|||++..+++++||+..+... ... ....|+++|+.+.+. ..+|+++.+|.+...+|||
T Consensus 2 ~~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-------~~~-~~~~E~~~l~~l~~~--~~~P~~~~~~~~~~~lv~e 71 (170)
T cd05151 2 HISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-------LLI-NRENEAENSKLAAEA--GIGPKLYYFDPETGVLITE 71 (170)
T ss_pred ceeecCCcccCceEEEEECCeEEEEEeCCCCcc-------ccc-CHHHHHHHHHHHHHh--CCCCceEEEeCCCCeEEEE
Confidence 478999999999999998866999999864321 112 237899999998774 4589999999989999999
Q ss_pred cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
++++ ..+... ....+...+++|+.|+++|..+
T Consensus 72 ~i~G--~~l~~~---~~~~~~~~~~l~~~l~~LH~~~ 103 (170)
T cd05151 72 FIEG--SELLTE---DFSDPENLEKIAKLLKKLHSSP 103 (170)
T ss_pred ecCC--Cccccc---cccCHHHHHHHHHHHHHHhCCC
Confidence 9983 333322 1234678899999999999876
No 8
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.11 E-value=5.9e-10 Score=86.87 Aligned_cols=111 Identities=17% Similarity=0.220 Sum_probs=84.4
Q ss_pred ceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----
Q 045250 35 LTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT----- 108 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e----- 108 (165)
+.++++++|..|.+|||...+| ++|||...+--. .-...+...|+++++.+... ...+|+++.++++
T Consensus 1 ~~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~------~~~~~~~~~E~~~~~~l~~~-~~~vp~~~~~~~~~~~~~ 73 (223)
T cd05154 1 LEVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGAL------LPSAHDVAREYRVLRALAGT-GVPVPKVLALCEDPSVLG 73 (223)
T ss_pred CcceecCCCccceEEEEEecCCcceEEEeCCCccc------CcccccHHHHHHHHHHhhCC-CCCCCCEEEECCCCCccC
Confidence 3578999999999999998875 999999753221 12345789999999999884 5569999999987
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcccc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~tsd 154 (165)
...++||+++ +..+...+..+... ..++.++|+.|+++|..+..
T Consensus 74 ~~~~v~e~i~--G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~ 121 (223)
T cd05154 74 TPFYVMERVD--GRVLRDRLLRPELSPEERRALARALADTLAALHSVDPA 121 (223)
T ss_pred CceEEEEEeC--CEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChh
Confidence 4589999998 34555544322222 36799999999999988753
No 9
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.95 E-value=4.6e-09 Score=84.02 Aligned_cols=122 Identities=17% Similarity=0.139 Sum_probs=96.9
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM 114 (165)
++..+.-|-=-.|++.......-|||...|+- |...-+-.++..|+..|++.|.....+ .-.+|++|+.|..++.+.|
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEecCCCeEEE
Confidence 44455555555888888775577889998886 654446789999999999999999887 8899999999999999999
Q ss_pred ecCCCCchHHHHHHHcCC----CC---HHHHHHHHHHHHHHHhc--------ccccccCc
Q 045250 115 RYLEPPHIILRKGLIAGI----KY---PLLAEHMSEFMAKTLFY--------TSLLYRTT 159 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~----~~---~~~a~~iG~~La~~h~~--------tsd~~l~~ 159 (165)
|+++ +...+|+.+..-- .+ ..++..||+.+|++|.- ||++-|.+
T Consensus 90 E~~~-g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~ 148 (229)
T KOG3087|consen 90 EFID-GASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRS 148 (229)
T ss_pred Eecc-chhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEec
Confidence 9998 6788888887632 22 36899999999999963 56665544
No 10
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.92 E-value=8.6e-09 Score=80.05 Aligned_cols=108 Identities=23% Similarity=0.211 Sum_probs=85.8
Q ss_pred ccCCceeEEEEEEeCCCeEEEEecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCC
Q 045250 40 VGDGNLNFVYIVVGTSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLE 118 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~ 118 (165)
||.|+...||++....+.+++|+..+.. +....++.+..+|...|.++|+.+... ...+|.++.++.+...++||+++
T Consensus 2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA-GVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEEEECCCCEEEEEEEC
Confidence 6889999999999654499999987654 221124667778999999999988763 45789999999999999999998
Q ss_pred CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 119 ~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
+..|.+.+..+.. .++.+++..|+.+|...
T Consensus 81 --g~~l~~~~~~~~~--~~~~~i~~~l~~lH~~g 110 (199)
T TIGR03724 81 --GKPLKDVIEEGND--ELLREIGRLVGKLHKAG 110 (199)
T ss_pred --CccHHHHHhhcHH--HHHHHHHHHHHHHHHCC
Confidence 4678777655432 78999999999999865
No 11
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.82 E-value=1.2e-08 Score=79.56 Aligned_cols=104 Identities=25% Similarity=0.293 Sum_probs=77.5
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC---C--Cc
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR---T--MS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~---e--~~ 110 (165)
.|+++++|..|.+|+|+..+|++|+|...+. . ...+...|.++++.+.+.-. .||+++.++. . ..
T Consensus 1 ~i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~-~--------~~~~~~~e~~~~~~l~~~~~-pvP~~~~~~~~~~~~~~~ 70 (239)
T PF01636_consen 1 HIRPLSGGFSNRVYRVTTDDGRYVLKFYRPP-D--------AAERLRREAAVLRQLAEHGI-PVPRVLAFDTSDEFNGFP 70 (239)
T ss_dssp -EEEEEESSSSEEEEEEETTSEEEEEEESSH-H--------HHHHHHHHHHHHHHHHHTTS-BS--EEEEEEETEETSEE
T ss_pred CCccCCCCCeeeEEEEEECCcEEEEEEeCCC-C--------CHHHHHHHHHHHHHHHhcCC-CCceEEeecccccccccc
Confidence 4789999999999999999889999997765 2 22688899999999988633 7999998432 2 23
Q ss_pred eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
..+|++++ +..+.. .+.....+.++.++|++|+++|..+
T Consensus 71 ~~~~~~i~--g~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~ 109 (239)
T PF01636_consen 71 YLLMEYIP--GRPLDD-ELSPEQRPELLRQLGRALAQLHQVP 109 (239)
T ss_dssp EEEEEEES--SEEHHH-TSTHHHHHHHHHHHHHHHHHHHHSH
T ss_pred eEEEEEec--cccccc-cccccccccccccchhhhhhccccc
Confidence 68999998 345544 1112234678999999999999985
No 12
>PRK05231 homoserine kinase; Provisional
Probab=98.74 E-value=1.4e-07 Score=78.91 Aligned_cols=128 Identities=15% Similarity=0.120 Sum_probs=92.9
Q ss_pred CCccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHH
Q 045250 4 TEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYF 83 (165)
Q Consensus 4 ~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~ 83 (165)
+-|..|+.+++.+.|..-+. .+..+++++++|..|.+|+|++.+|++|||... + .+.+....
T Consensus 2 ~vyt~ls~~~l~~~l~~y~~--------~~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~---~-------~~~~~l~~ 63 (319)
T PRK05231 2 AVYTDVSDDELAAFLAPYDL--------GELLSLKGIAEGIENSNFFLTTTQGEYVLTLFE---R-------LTAEDLPF 63 (319)
T ss_pred CccccCCHHHHHHHHHhcCC--------chhhccchhccccccceEEEEeCCCcEEEEEec---c-------CChHHhHH
Confidence 45899999999999965431 134578999999999999999888899999643 1 23355667
Q ss_pred HHHHHHHhhccCCCCCceEEEE--------cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 045250 84 EALALKEHGKLCPDHVPEVYHF--------DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL 155 (165)
Q Consensus 84 E~~~L~~~~~~~p~~vP~v~~~--------D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~ 155 (165)
|.++|+.+.+. .-.||+++.. ......++||++++ . .+ ....+..++++|+.||++|..+.+|
T Consensus 64 ~~~~l~~L~~~-glpvP~~i~~~~G~~~~~~~g~~~~l~~~l~G-~-~~------~~~~~~~~~~~G~~LA~lH~~~~~f 134 (319)
T PRK05231 64 FLGLMQHLAAR-GVPVPAPVARRDGAALGELAGKPAAIVTFLEG-K-WP------RAPTAAHCAEVGEMLARMHLAGRDF 134 (319)
T ss_pred HHHHHHHHHHC-CCCCCcceeCCCCCEeeeeCCEEEEEEEecCC-C-CC------CCCCHHHHHHHHHHHHHHHhhhhcC
Confidence 88888888653 3336776642 23446789999983 2 21 1134567899999999999999887
Q ss_pred ccC
Q 045250 156 YRT 158 (165)
Q Consensus 156 ~l~ 158 (165)
...
T Consensus 135 ~~~ 137 (319)
T PRK05231 135 PLE 137 (319)
T ss_pred Ccc
Confidence 654
No 13
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.74 E-value=1.1e-07 Score=76.57 Aligned_cols=102 Identities=16% Similarity=0.073 Sum_probs=76.7
Q ss_pred eEeccCCce-eEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEE
Q 045250 37 IKEVGDGNL-NFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT--MSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~-N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e--~~~~v 113 (165)
.++|..|.. |.||+++..+++++||...+.- ..+...|+++|+.+++. ..+|+++++++. ...+|
T Consensus 3 ~~~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~----------~~~~~~E~~~l~~l~~~--~~vP~v~~~~~~~~~~~lv 70 (244)
T cd05150 3 WERVTEGQSGATVYRLDGKNPGLYLKIAPSGP----------TYELEREAERLRWLAGK--LPVPEVIDYGSDDGRAWLL 70 (244)
T ss_pred ceecCCCCCcCeEEEEcCCCCcEEEEecCCCc----------ccchHHHHHHHHHHHhc--CCCCeEEEEEecCCccEEE
Confidence 456666655 9999999876699999987442 23556799999999886 569999999876 47899
Q ss_pred EecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250 114 MRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts 153 (165)
||+++ +..+.+... ....+.++.++|++|+++|....
T Consensus 71 ~e~i~--G~~l~~~~~-~~~~~~~~~~l~~~l~~lH~i~~ 107 (244)
T cd05150 71 TSAVP--GVPAAALWE-ELEPERLVDALAEALRRLHALPV 107 (244)
T ss_pred EEeeC--CccHhHhhc-ccCHHHHHHHHHHHHHHHhcCCc
Confidence 99998 345544332 11235789999999999998753
No 14
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.73 E-value=8.9e-08 Score=74.83 Aligned_cols=112 Identities=21% Similarity=0.126 Sum_probs=84.2
Q ss_pred EeccCCceeEEEEEEeCCCeEEEEecCcccccc-CCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 045250 38 KEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCI-GESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRY 116 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~-~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEd 116 (165)
+.+|.|....||++...++.++||+..+..... ..+.....+|...|++.|+.+... ...+|.+++++.+...++|||
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKA-GVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCeEEEEeCCCCEEEEEE
Confidence 568899999999998755599999987654211 112334456888899999887652 456899999999999999999
Q ss_pred CCCCchHHHHHHHcCCC-CHHHHHHHHHHHHHHHhcc
Q 045250 117 LEPPHIILRKGLIAGIK-YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 l~~~~~~lr~~l~~g~~-~~~~a~~iG~~La~~h~~t 152 (165)
++ +..|.+.+..... ...++.+++.+|+.+|...
T Consensus 81 ~~--G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 115 (211)
T PRK14879 81 IE--GEPLKDLINSNGMEELELSREIGRLVGKLHSAG 115 (211)
T ss_pred eC--CcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCC
Confidence 97 4577776654322 2478999999999999764
No 15
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.72 E-value=1.7e-07 Score=74.84 Aligned_cols=105 Identities=14% Similarity=0.066 Sum_probs=76.5
Q ss_pred ceeEeccCCceeEEEEEEeCC--C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCce
Q 045250 35 LTIKEVGDGNLNFVYIVVGTS--G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSL 111 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rV~~~~--g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~ 111 (165)
+.+++++||..|.+|||+..+ + ++|+|.-.+.. ...+ +| ..|..+++.++.. +.+|+++++.. ..
T Consensus 1 ~~i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~-----~~~~--d~-~~E~~~~~~l~~~--gl~P~v~~~~~--~~ 68 (235)
T cd05157 1 ITFKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT-----ELII--DR-ERELRIHKLLSKH--GLAPKLYATFQ--NG 68 (235)
T ss_pred CeEEEcCCcccceEEEEEcCCCCCCeEEEEEccCCc-----ccee--cH-HHHHHHHHHHHhC--CCCCeEEEEeC--Cc
Confidence 368999999999999999874 4 89999655321 1223 33 2599999998874 35899987764 35
Q ss_pred EEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY 156 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~ 156 (165)
++||+++ + ..+...-+ ..+....++|..||++|..+....
T Consensus 69 ~l~e~i~-G-~~l~~~~~---~~~~~~~~la~~l~~lH~~~~~~~ 108 (235)
T cd05157 69 LIYEFIP-G-RTLEPEDL---RNPKIYRLIARELAKLHSIKPPEA 108 (235)
T ss_pred EEEEeeC-C-CcCCHHHc---cChHHHHHHHHHHHHHhccccccc
Confidence 8999998 3 44433211 236788999999999999987764
No 16
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=98.70 E-value=2.7e-07 Score=77.09 Aligned_cols=128 Identities=11% Similarity=0.119 Sum_probs=92.2
Q ss_pred CccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHH
Q 045250 5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFE 84 (165)
Q Consensus 5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E 84 (165)
-|..++.+.+.+.|...+. .+..+++++++|..|.+|+|++++|+.|+|...+. -+.++...|
T Consensus 3 ~~~~~~~~~l~~~l~~y~~--------~~~~~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~---------~~~~~i~~e 65 (307)
T TIGR00938 3 VYTSVSDEEMSSFLDGYDL--------GELLSLKGIAEGVENSNYLLTTDVGRYILTLYEKR---------VKAEELPFF 65 (307)
T ss_pred ccccCCHHHHHHHHHhcCC--------CCceeccccCCccccceEEEEeCCCcEEEEEecCC---------CCHHHHHHH
Confidence 4788999999999986531 23457999999999999999988789999975431 124577788
Q ss_pred HHHHHHhhccCCCCCceEEEEc--------CCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 045250 85 ALALKEHGKLCPDHVPEVYHFD--------RTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY 156 (165)
Q Consensus 85 ~~~L~~~~~~~p~~vP~v~~~D--------~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~ 156 (165)
.++++.+.+. ...||+++... .....++||++++ ..+. ...+..+.++|+.||++|..+.+|-
T Consensus 66 ~~~l~~L~~~-g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i~G--~~~~------~~~~~~~~~~G~~LA~lH~~~~~~~ 136 (307)
T TIGR00938 66 LALTTHLAAR-GLPVPKPVKSRDGRQLSTLAGKPACLVEFLQG--LSVG------RPTAMHCRPVGEVLAWMHLAGAHFP 136 (307)
T ss_pred HHHHHHHHHC-CCCCCccccCCCCCeehhcCCeEEEEEEeCCC--CCCC------CCCHHHHHHHHHHHHHHHhhhccCC
Confidence 8988888652 22366666532 2334689999983 3331 1235678999999999999998875
Q ss_pred cC
Q 045250 157 RT 158 (165)
Q Consensus 157 l~ 158 (165)
.+
T Consensus 137 ~~ 138 (307)
T TIGR00938 137 EN 138 (307)
T ss_pred CC
Confidence 44
No 17
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.67 E-value=1.7e-07 Score=67.42 Aligned_cols=102 Identities=22% Similarity=0.192 Sum_probs=78.5
Q ss_pred eEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEEE
Q 045250 37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT--MSLIGM 114 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e--~~~~vM 114 (165)
+++++.|..|-||++...++.++||+..+... ..+...|..+|+.+... +..+|+++.+... ...++|
T Consensus 3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~---------~~~~~~e~~~~~~l~~~-~~~~p~~~~~~~~~~~~~~v~ 72 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREK---------GADREREVAILQLLARK-GLPVPKVLASGESDGWSYLLM 72 (155)
T ss_pred ceecccccccceEEEEecCCeEEEEecCCCCc---------hhHHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCccEEEE
Confidence 57899999999999998777999998754322 46788899999999876 6788999888765 799999
Q ss_pred ecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
|+++. ..+... .....+.++.++++.|+.+|..+
T Consensus 73 e~~~g--~~~~~~--~~~~~~~~~~~~~~~l~~lh~~~ 106 (155)
T cd05120 73 EWIEG--ETLDEV--SEEEKEDIAEQLAELLAKLHQLP 106 (155)
T ss_pred EecCC--eecccC--CHHHHHHHHHHHHHHHHHHhCCC
Confidence 99983 333321 11123568899999999999764
No 18
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=98.66 E-value=1.4e-07 Score=79.32 Aligned_cols=98 Identities=23% Similarity=0.245 Sum_probs=69.0
Q ss_pred CCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCC
Q 045250 32 FDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RTM 109 (165)
Q Consensus 32 ~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e~ 109 (165)
..-.++++++||-+|-.||++...+++.||....-.+ .....|++-|+.+++..|..||+++.+- .+.
T Consensus 17 ~~i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~----------~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~ 86 (288)
T PF03881_consen 17 FKITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGR----------DMFEGEAEGLKALAEANPIRVPKVIAWGEYDDD 86 (288)
T ss_dssp ----EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGC----------CHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSC
T ss_pred CceeeeEecCCCChhheEEEECCCccEEEEecChhhH----------HHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCC
Confidence 3456999999999999999996666999998872211 4788999999999998999999999975 356
Q ss_pred ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLF 150 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~ 150 (165)
+.++||++.. . ...+...+.+|+.||++|.
T Consensus 87 ~fLlle~l~~-~----------~~~~~~~~~lg~~LA~LH~ 116 (288)
T PF03881_consen 87 AFLLLEFLEM-G----------SPSPPDWEELGRQLAALHQ 116 (288)
T ss_dssp CEEEEE-------------------CCHHHHHHHHHHHHHH
T ss_pred ceEEEEeecC-C----------CCCchhHHHHHHHHHHHhh
Confidence 7899999983 2 1123468999999999999
No 19
>PLN02876 acyl-CoA dehydrogenase
Probab=98.64 E-value=5e-07 Score=85.39 Aligned_cols=135 Identities=19% Similarity=0.243 Sum_probs=94.3
Q ss_pred ccCHhhHHHHHHhCC-CcccccCCCCCcceeEeccCCceeEEEEEEeCCC----eEEEEecCccccccCCCCCCChHHHH
Q 045250 8 PLDDKSLLEYIKATP-SLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG----SFVIKQALPYVRCIGESWPMTKERAY 82 (165)
Q Consensus 8 ~l~~~~v~~Yl~~~~-~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~ 82 (165)
.++.+.+..||+++. .+ +.+.+.++++.+++|.+|.+|+++..++ .+|+|...+-.. ..+.....
T Consensus 17 ~~d~~~l~~~l~~~~~~~----~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~------~~~~~~~~ 86 (822)
T PLN02876 17 RFDEDALLRYAAANVAGF----PVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKL------LQSAHAVE 86 (822)
T ss_pred cCCHHHHHHHHHHhCCCc----CCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCcc------CccHHHHH
Confidence 578899999999752 11 1122347899999999999999987653 678887654321 22345778
Q ss_pred HHHHHHHHhhccCCCCCceEEEEcCC-----CceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcccc
Q 045250 83 FEALALKEHGKLCPDHVPEVYHFDRT-----MSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 83 ~E~~~L~~~~~~~p~~vP~v~~~D~e-----~~~~vMEdl~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~tsd 154 (165)
.|+++|+.++......||++|.+..+ ...+|||+++ +.++.+....+.. ...++.++++.|+++|...-+
T Consensus 87 rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~--G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~ 164 (822)
T PLN02876 87 REYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLE--GRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVD 164 (822)
T ss_pred HHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecC--CcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCch
Confidence 99999999986555679999988554 4568999998 3444332211111 124788999999999997643
No 20
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=98.61 E-value=3.3e-07 Score=75.64 Aligned_cols=120 Identities=15% Similarity=0.113 Sum_probs=86.3
Q ss_pred hhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHh
Q 045250 12 KSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEH 91 (165)
Q Consensus 12 ~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~ 91 (165)
+++..++.+-+ ..+..+++++++|..|.+|+|...++++|+|...+ -+.++...|.++++.+
T Consensus 2 ~~l~~~l~~y~--------~~~~~~i~~i~~G~~n~~y~v~~~~~~~vLr~~~~----------~~~~~~~~e~~~l~~L 63 (296)
T cd05153 2 EELASFLADYD--------LGELLSFEGISAGIENTNYFVTTDSGRYVLTLFEK----------VSAEELPFFLALLDHL 63 (296)
T ss_pred HHHHHHHHHcC--------CCchhheecccCccccceEEEEeCCCcEEEEEcCC----------CChHhccHHHHHHHHH
Confidence 45566666543 12345899999999999999998877999998654 1236788899999998
Q ss_pred hccCCCCCceEEEEcC--------CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccC
Q 045250 92 GKLCPDHVPEVYHFDR--------TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT 158 (165)
Q Consensus 92 ~~~~p~~vP~v~~~D~--------e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~ 158 (165)
.+. ...||+++.... ....++|+++++ ..+.. ..+....++|+.||++|..++++..+
T Consensus 64 ~~~-g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G--~~~~~------~~~~~~~~lg~~La~lH~~~~~~~~~ 129 (296)
T cd05153 64 AER-GLPVPRPIADRDGEYLSELAGKPAALVEFLAG--EHLTR------PTAAHCRQIGEALARLHLAAQSFPGE 129 (296)
T ss_pred HHC-CCCCCccccCCCCcEeeeeCCceEEEEEeCCC--CCCCC------CCHHHHHHHHHHHHHHHHHhccCCcc
Confidence 764 234777765433 234689999983 23321 34678999999999999998876544
No 21
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.60 E-value=2.7e-07 Score=75.04 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=73.5
Q ss_pred eEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 045250 37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRY 116 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEd 116 (165)
+++++||..|.+||++.+++++|+|...+-.+ .+..+| ..|+++|+.+++. +.+|+++++|+ ..+|||+
T Consensus 1 ~~~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~------~~~~~r-~~E~~~l~~l~~~--g~~P~~i~~~~--~~~v~e~ 69 (256)
T TIGR02721 1 VQTLSGGLTNRSWRIEHPGISFVWRPQSPVCK------ALGVDR-QREYQILQALSAL--GLAPKPILVNE--HWLLVEW 69 (256)
T ss_pred CCcCCCcCcCCeEEEEeCCccEEEeeCCcccc------cccCcH-HHHHHHHHHHHhc--CCCCceEEEeC--CEEEEEe
Confidence 35789999999999996655999997654322 122234 6699999999874 24899999986 4789999
Q ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250 117 LEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 117 l~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts 153 (165)
++ +..+... -...+....++++.|+++|....
T Consensus 70 i~--G~~~~~~---~~~~~~~~~~la~~l~~lH~~~~ 101 (256)
T TIGR02721 70 LE--GEVITLD---QFVALDLLLELAALLHQLHSQPR 101 (256)
T ss_pred cc--Ccccccc---cccCchhHHHHHHHHHHHhCCCC
Confidence 98 3444321 11245678999999999998764
No 22
>PRK10593 hypothetical protein; Provisional
Probab=98.60 E-value=1.6e-07 Score=78.91 Aligned_cols=109 Identities=13% Similarity=0.077 Sum_probs=79.4
Q ss_pred cceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-----CC
Q 045250 34 DLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-----RT 108 (165)
Q Consensus 34 ~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-----~e 108 (165)
..+++++++|..|-||++.+.+++++||..... .+.+-...|++.|+.+++.....||+|+..- ..
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~---------~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g 86 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDSQGNPMPLMARSF---------STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPG 86 (297)
T ss_pred hheeeecCCccceeEEEEEcCCCCEEEEEeccc---------ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCC
Confidence 348999999999999999988788888985421 1235788999999999886557899999743 24
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts 153 (165)
...+|||++. +.++.+..........+++.++..||++|..++
T Consensus 87 ~~~LVmE~i~--G~~~~~~~~~~~~~~~l~~~l~~~La~LH~~~~ 129 (297)
T PRK10593 87 PDVLLLERLR--GVSVEAPARTPERWEQLKDQIVEGLLAWHRIDS 129 (297)
T ss_pred CeEEEEeccC--CEecCCCCCCHHHHHHHHHHHHHHHHHHhCCCh
Confidence 4899999998 334433111111123567778899999999764
No 23
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=98.53 E-value=4.2e-07 Score=75.43 Aligned_cols=104 Identities=15% Similarity=0.099 Sum_probs=76.5
Q ss_pred ceeEeccCCceeEEEEEEeCC-------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc
Q 045250 35 LTIKEVGDGNLNFVYIVVGTS-------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD 106 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rV~~~~-------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D 106 (165)
+++++++||..|.+|+|+..+ + ++|+|...+ +..... ....|.++++.+++.- .+|++++++
T Consensus 1 ~~i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~-------~~~~~~-~r~~E~~~~~~l~~~g--~~P~~~~~~ 70 (302)
T cd05156 1 LEVSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQ-------SVELLI-DRERELVVFARLSERN--LGPKLYGIF 70 (302)
T ss_pred CeEEEecCcccceeEEEEcCCcccccCCCCeEEEEEecC-------CCccee-chHHHHHHHHHHHhCC--CCCceEEEe
Confidence 368999999999999999765 3 777777332 222222 3478999999998853 589999999
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL 155 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~ 155 (165)
++ ..|||++. + ..+....+ ..+..++++|..|+++|......
T Consensus 71 ~~--~~v~e~i~-G-~~l~~~~~---~~~~~~~~ia~~L~~lH~~~~~~ 112 (302)
T cd05156 71 PN--GRIEEFIP-S-RTLTTEEL---RDPDISAEIARRMAKLHSIVVPL 112 (302)
T ss_pred CC--CchhheeC-C-CcCCHhHc---CCcHHHHHHHHHHHHhhCCCCCC
Confidence 74 56899998 3 34443322 24678999999999999987653
No 24
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.44 E-value=1e-06 Score=70.87 Aligned_cols=102 Identities=17% Similarity=0.110 Sum_probs=75.1
Q ss_pred eEecc-CCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----Cc
Q 045250 37 IKEVG-DGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT-----MS 110 (165)
Q Consensus 37 v~~l~-~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e-----~~ 110 (165)
++++. ||..|.||++. +++|+|...+.. +..+...|+++|+.+.+.++..+|+++..... ..
T Consensus 2 ~~~~~~gG~~n~vy~~~---~~~VlR~~~~~~---------~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~ 69 (235)
T cd05155 2 IEPVDSGGTDNATFRLG---DDMSVRLPSAAG---------YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWP 69 (235)
T ss_pred ceeccCCCcccceEEcC---CceEEEcCCccc---------hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcc
Confidence 45566 89999999983 378889755321 23578899999999987678889999987654 23
Q ss_pred eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd 154 (165)
.++||+++ +.++...... ....+++++|++|+++|..+..
T Consensus 70 ~~l~~~i~--G~~l~~~~~~--~~~~l~~~la~~l~~LH~i~~~ 109 (235)
T cd05155 70 WSVYRWLE--GETATAAALS--DPSEFAEDLADFLAALRQIDPS 109 (235)
T ss_pred eEEEEeec--CCCCCccccC--CHHHHHHHHHHHHHHHhCCCcc
Confidence 67899998 4566543211 1237899999999999987654
No 25
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.43 E-value=1.3e-06 Score=70.67 Aligned_cols=102 Identities=16% Similarity=0.084 Sum_probs=76.3
Q ss_pred eEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEE
Q 045250 37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIGM 114 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~vM 114 (165)
.+++++|..|-||+.. ++++|+|...+.. +..+...|+++|+.+... +-.||+++++ |.+...++|
T Consensus 6 ~~~i~~G~t~~~y~~~--~~~~VlR~~~~~~---------~~~~i~~E~~~l~~l~~~-glpvP~~~~~~~~~~~~glv~ 73 (226)
T TIGR02172 6 WTQTGEGGNGESYTHK--TGKWMLKLYNPGF---------DKETIKREFDASRKVFSL-GIPTPHPFDLVEDGGRLGLIY 73 (226)
T ss_pred heeecCCCCcceeEec--CCCEEEEeCCCCC---------CHHHHHHHHHHHHHHHHc-CCCCCceEEEEecCCeeeeee
Confidence 4789999999999853 3388999987533 335678899999999864 6779999999 666778899
Q ss_pred ecCCCCchHHHHHHHcCCC-CHHHHHHHHHHHHHHHhc
Q 045250 115 RYLEPPHIILRKGLIAGIK-YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~-~~~~a~~iG~~La~~h~~ 151 (165)
|.++ +...+...+..... .+.++..+|..|+++|..
T Consensus 74 e~i~-G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~ 110 (226)
T TIGR02172 74 ELIV-GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHST 110 (226)
T ss_pred eecC-CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCC
Confidence 9998 33334333332222 246899999999999975
No 26
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.35 E-value=8e-06 Score=66.59 Aligned_cols=114 Identities=13% Similarity=0.015 Sum_probs=82.3
Q ss_pred eEecc-CCceeEEEEEEeCCCeEEEEecCc-c--ccccCCC--C-CCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-
Q 045250 37 IKEVG-DGNLNFVYIVVGTSGSFVIKQALP-Y--VRCIGES--W-PMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT- 108 (165)
Q Consensus 37 v~~l~-~Gn~N~v~rV~~~~gsvIvKqa~p-~--~r~~~~~--~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e- 108 (165)
-..+| .|..|-||+|...+++++||+... - .++...+ | .....|...|++.|+.+... .-.||+++.+...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~-gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEA-GLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhC-CCCCceeEeeeeee
Confidence 34675 899999999999877999998853 1 1221112 1 35667899999999988763 3346777765321
Q ss_pred C-----ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 109 M-----SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~-----~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
. ..+|||+++ +...|.+.+.++........+|+.+|+.+|...
T Consensus 115 ~~~~~~~~lV~e~l~-G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~G 162 (239)
T PRK01723 115 HGLFYRADILIERIE-GARDLVALLQEAPLSEEQWQAIGQLIARFHDAG 162 (239)
T ss_pred cCcceeeeEEEEecC-CCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCC
Confidence 1 249999998 557888887776666778899999999999875
No 27
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=98.30 E-value=6.2e-06 Score=68.72 Aligned_cols=108 Identities=19% Similarity=0.069 Sum_probs=77.3
Q ss_pred cceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 045250 34 DLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLI 112 (165)
Q Consensus 34 ~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~ 112 (165)
.-++...+.|..|.||+|.+.+| .+|||+++ ...+ ..|...|+++|+.++..+|..+|+++..+.+ .+
T Consensus 13 ~~~~~~~~~g~~~~v~~i~~~~g~~~VlR~p~-~~~~--------~~~l~rE~~vL~~L~~~l~vpvP~~~~~~~~--~~ 81 (276)
T cd05152 13 PETLSLNESGLDFQVVFAKDTDGVPWVLRIPR-RPDV--------SERAAAEKRVLALVRKHLPVQVPDWRVHTPE--LI 81 (276)
T ss_pred CCcceecCCcceeEEEEEEcCCCCeEEEEecC-CHHH--------HHHHHHHHHHHHHHHhcCCCCCCceeeecCc--eE
Confidence 34667777888899999977666 99999995 2222 2578899999999998789999998877765 46
Q ss_pred EEecCCCCchHHHH-HHHc---------CCCCHHHHHHHHHHHHHHHhcccc
Q 045250 113 GMRYLEPPHIILRK-GLIA---------GIKYPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 113 vMEdl~~~~~~lr~-~l~~---------g~~~~~~a~~iG~~La~~h~~tsd 154 (165)
+|+.++. ..+.. .... ....+.+|.++|++|+++|....+
T Consensus 82 ~y~~i~G--~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~ 131 (276)
T cd05152 82 AYPKLPG--VPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQD 131 (276)
T ss_pred EEeccCC--CcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChh
Confidence 7888873 22210 0000 123467999999999999977653
No 28
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=98.20 E-value=1.4e-05 Score=68.36 Aligned_cols=131 Identities=16% Similarity=0.143 Sum_probs=97.5
Q ss_pred cccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHH
Q 045250 7 RPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEAL 86 (165)
Q Consensus 7 ~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~ 86 (165)
..++...+..||..+- + + -.+...+++.++|.+|-+|+....+.++||- +.|.... ..+.++...|++
T Consensus 6 ~~~~~~~l~~~l~~~i--p---~-~~~~~~v~~~~~G~sn~t~~~~~~~~~~vlR-~P~~~~~-----~~~~~~~~re~~ 73 (321)
T COG3173 6 VALDIAALAAYLRSQI--P---G-YAGLLIVEEISGGWSNDTFRLGDTGQKYVLR-KPPRGDP-----VESAHDEKREYR 73 (321)
T ss_pred ccCCHHHHHHHHHhhC--c---C-cCCCceeeeccCCcccceEEEecCCceEEEe-cCCcccc-----chhhhHHHhHHH
Confidence 4567788899998641 1 1 2345688889999999999999875589988 5553333 245677788888
Q ss_pred HHHHhhccCCCCCceEEEEcCCCc----eEEEecCCCCchHHHHHHHcCCCCHHHHH-HHHHHHHHHHhcc
Q 045250 87 ALKEHGKLCPDHVPEVYHFDRTMS----LIGMRYLEPPHIILRKGLIAGIKYPLLAE-HMSEFMAKTLFYT 152 (165)
Q Consensus 87 ~L~~~~~~~p~~vP~v~~~D~e~~----~~vMEdl~~~~~~lr~~l~~g~~~~~~a~-~iG~~La~~h~~t 152 (165)
.|+.+... +..+|..+.+=.+.+ -+||+++. +...+..+..+.....++. ++|++||.+|..-
T Consensus 74 ~i~~l~~~-~vP~p~~~~~~~~~~~g~pf~v~~~ve--Ge~~~~~~~~~~~~~~~~~~~l~~~La~LH~id 141 (321)
T COG3173 74 VIAALLDV-DVPVPRAFGLCGEGYLGTPFYVMEWVE--GEVVWSALPPESLGRQFALDALADFLAELHSID 141 (321)
T ss_pred HHHHhcCC-CCCCcccccccccCCCCCceEEEEEec--ceeccCcCCcccchHHHHHHHHHHHHHHHhCCC
Confidence 88888886 778899998888888 99999998 3344454444443345666 9999999999876
No 29
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.16 E-value=1e-05 Score=72.95 Aligned_cols=110 Identities=24% Similarity=0.157 Sum_probs=83.9
Q ss_pred eEeccCCceeEEEEEEeCCCeEEEEecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250 37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR 115 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME 115 (165)
.+.+|.|....||++....+.+++|...+.. +....+..+..+|...|+++|+.+... ...+|.++..+++...+|||
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~E 416 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRA-GVPTPVIYDVDPEEKTIVME 416 (535)
T ss_pred cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhccc-CCCeeEEEEEeCCCCEEEEE
Confidence 4678999999999998776677777766543 221224456678899999999988652 34578889999999999999
Q ss_pred cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
|++ +..|.+.+. ....++.+++..|+.+|...
T Consensus 417 ~~~--g~~L~~~l~---~~~~~~~~i~~~L~~lH~~g 448 (535)
T PRK09605 417 YIG--GKDLKDVLE---GNPELVRKVGEIVAKLHKAG 448 (535)
T ss_pred ecC--CCcHHHHHH---HHHHHHHHHHHHHHHHHhCC
Confidence 997 467877765 23568999999999999864
No 30
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.12 E-value=5.5e-05 Score=62.02 Aligned_cols=107 Identities=10% Similarity=-0.027 Sum_probs=77.6
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHH------HHHHHHHHHHhhccCCCCCceEEEEcCC-
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKER------AYFEALALKEHGKLCPDHVPEVYHFDRT- 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R------~~~E~~~L~~~~~~~p~~vP~v~~~D~e- 108 (165)
.++.+++|-.+.||.+.+..+.+|||+=.|..... +.-..| ...|+..+..+.. ..-.+|..++.|.+
T Consensus 35 ~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~----~~~~~~f~~g~~~e~Ea~~l~rL~~-~GI~~~~d~~~~~~~ 109 (232)
T PRK10359 35 TIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRT----ERFLKSFVKGDYYENLIVQTDRVRS-EGLASLNDFYLLAER 109 (232)
T ss_pred EEEEecCCCceEEEEEecCCCcEEEEEechhcCch----HHHHHhhhhhHHHHHHHHHHHHHHH-CCCCcceEeeeeccc
Confidence 78889999999999987754499999988776421 111233 3466667777744 35567788877765
Q ss_pred -------CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 109 -------MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 -------~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
...++|||++ +..|++.. ...+....+++..|+.+|...
T Consensus 110 ~~~~~~~~~~lvmEyi~--G~tL~~~~---~~~~~~~~~i~~~l~~lH~~g 155 (232)
T PRK10359 110 KTLRYAHTYIMLIEYIE--GVELNDMP---EISEDVKAKIKASIESLHQHG 155 (232)
T ss_pred ccccccCCeEEEEEEEC--CccHHHhh---hccHHHHHHHHHHHHHHHHcC
Confidence 4788999998 45777752 234567889999999999753
No 31
>PLN02236 choline kinase
Probab=98.05 E-value=2.4e-05 Score=67.10 Aligned_cols=123 Identities=9% Similarity=0.039 Sum_probs=85.3
Q ss_pred HhhHHHHHHhCC-CcccccCCCCCcceeEeccCCceeEEEEEEeCC-----C-eEEEEecCccccccCCCCCCChHHHHH
Q 045250 11 DKSLLEYIKATP-SLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTS-----G-SFVIKQALPYVRCIGESWPMTKERAYF 83 (165)
Q Consensus 11 ~~~v~~Yl~~~~-~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~-----g-svIvKqa~p~~r~~~~~~~l~~~R~~~ 83 (165)
+.++...+++.. ... ++ .+.+.+++++++||..|.+|+|+..+ + ++|+|.-.+.. .+-.+| ..
T Consensus 16 ~~~~~~~~~~~~~~w~-~~-~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t-------~~~idR-~~ 85 (344)
T PLN02236 16 PDELKRILHSLASKWG-DV-VDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV-------ELFFDR-DD 85 (344)
T ss_pred hHHHHHHHHHhcchhc-CC-CCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC-------Ceeech-HH
Confidence 445666666531 111 00 13467899999999999999998532 2 68888665432 244567 78
Q ss_pred HHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 84 EALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 84 E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
|.++++.+++. +..|+++++++.. .|.||++ ...|...-+ ..+.+..+++..|+++|...
T Consensus 86 E~~~~~~l~~~--gl~P~~~~~~~~g--~v~efi~--g~~l~~~~l---~~~~~~~~ia~~L~~lH~~~ 145 (344)
T PLN02236 86 EIRTFECMSRH--GQGPRLLGRFPNG--RVEEFIH--ARTLSAADL---RDPEISALIAAKLREFHSLD 145 (344)
T ss_pred HHHHHHHHHHc--CCCCceEEEECCc--eEEEeeC--CCCCCHHHc---CChHHHHHHHHHHHHHhCCC
Confidence 99999999884 5689999998654 6899997 345543211 34678999999999999854
No 32
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.05 E-value=2.9e-05 Score=61.68 Aligned_cols=94 Identities=18% Similarity=0.073 Sum_probs=75.2
Q ss_pred eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC------CceEEEecCCCCchHHHHHHHc
Q 045250 57 SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT------MSLIGMRYLEPPHIILRKGLIA 130 (165)
Q Consensus 57 svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e------~~~~vMEdl~~~~~~lr~~l~~ 130 (165)
++.+|.-..++...---.++...|...|++.++.+.+. ...||+++.|... .+.+|||+++ +...|.+.+.+
T Consensus 34 ~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~-Gi~tP~pva~~~~r~~~~~~s~lite~l~-~~~~L~~~~~~ 111 (206)
T PF06293_consen 34 RYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREA-GIPTPEPVAYGERRKGGGYRSYLITEALP-GAQDLRDLLQQ 111 (206)
T ss_pred EEEECCeechhccchhhhcccchHHHHHHHHHHHHHHc-CCCCCcEEEEEEEcCCCceeEEEEEEeCC-CcccHHHHHHh
Confidence 78888776665321123458889999999999999885 7779999999887 4589999999 68899998886
Q ss_pred -----CCCCHHHHHHHHHHHHHHHhcc
Q 045250 131 -----GIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 131 -----g~~~~~~a~~iG~~La~~h~~t 152 (165)
......+.+++|.+++++|...
T Consensus 112 ~~~~~~~~~~~ll~~l~~~i~~lH~~g 138 (206)
T PF06293_consen 112 WEQLDPSQRRELLRALARLIAKLHDAG 138 (206)
T ss_pred hcccchhhHHHHHHHHHHHHHHHHHCc
Confidence 3334689999999999999875
No 33
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=98.00 E-value=7.8e-05 Score=64.05 Aligned_cols=132 Identities=15% Similarity=0.134 Sum_probs=96.0
Q ss_pred CCCCCccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHH
Q 045250 1 MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKER 80 (165)
Q Consensus 1 ~~~~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R 80 (165)
|++..|..++++++.+.|...+. ....+...+.. .-|.+|+|.+.+|+.|||-..|- +. ..-
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~--------g~~~~~~~l~s-~eN~~f~~~~~~g~~iLki~~~~-~~--------~~~ 64 (331)
T COG2334 3 DSMAVFTPLTSDEAAAALEAYHY--------GLDGSLRGLNS-EENSNFRVQTEDGRYILKIYRPG-WT--------RAE 64 (331)
T ss_pred cccccccCcChHHHHHHHHhcCc--------Ccccccccccc-ccCceEEEEecCCCeEEEEecCC-CC--------HHH
Confidence 45678999999999999987542 22345566666 78999999999997799998876 32 246
Q ss_pred HHHHHHHHHHhhcc-CCCCCceEEEEcC-------C--CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Q 045250 81 AYFEALALKEHGKL-CPDHVPEVYHFDR-------T--MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLF 150 (165)
Q Consensus 81 ~~~E~~~L~~~~~~-~p~~vP~v~~~D~-------e--~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~ 150 (165)
...|-++|+.+++- .|..+| +-.-|- . -..-+.++++ +..+.+ ..-...++.+|++||++|.
T Consensus 65 i~~el~~l~~La~~~i~v~~P-l~~~dG~~l~~~~~~~r~a~lf~~l~--G~~~~~-----~~~~~~~~~lG~~LgrlH~ 136 (331)
T COG2334 65 IPFELALLQHLAERGIPVPAP-LPSLDGELLEALSGGPRPAALFEYLP--GRPLER-----DDNAEQLEELGRMLGRLHL 136 (331)
T ss_pred HHHHHHHHHHHHHcCCCCCCC-ccCCCcchhhhccCCceeEEEEEecC--CcCcCC-----CCcHHHHHHHHHHHHHHHH
Confidence 77888899998874 344444 222221 2 5667889998 445543 3446789999999999999
Q ss_pred cccccccC
Q 045250 151 YTSLLYRT 158 (165)
Q Consensus 151 ~tsd~~l~ 158 (165)
.+.+|-+.
T Consensus 137 a~~~f~~~ 144 (331)
T COG2334 137 ALRGFPFE 144 (331)
T ss_pred HhCcCCcc
Confidence 99999754
No 34
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.93 E-value=6.9e-05 Score=63.80 Aligned_cols=105 Identities=12% Similarity=0.109 Sum_probs=76.5
Q ss_pred CCCcceeEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 045250 31 KFDDLTIKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF 105 (165)
Q Consensus 31 ~~~~~~v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~ 105 (165)
+.++++++++.||..|.+|||+..+ + ++|||.-.+.. + .-.+| ..|..+++.+++. +..|+++++
T Consensus 13 ~~~~i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t-----~--~~IdR-~~E~~il~~l~~~--gl~P~~l~~ 82 (330)
T PLN02421 13 DDSDFSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNT-----D--YVIDR-ERELQAIKYLSAA--GFGAKLLGV 82 (330)
T ss_pred CcCceEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCc-----C--eEech-HHHHHHHHHHHhc--CCCCceeEE
Confidence 4568999999999999999997543 2 78888665432 2 23445 5699999999874 567999998
Q ss_pred cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 106 DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
++ +. +|.|++. +..|...-+ ..|.....|+..|+++|...
T Consensus 83 ~~-~G-~i~~fi~--g~~l~~~~l---~~~~~~~~ia~~L~~lH~~~ 122 (330)
T PLN02421 83 FG-NG-MIQSFIN--ARTLTPSDM---RKPKVAAEIAKELRRLHQVE 122 (330)
T ss_pred eC-Cc-Eeehhhc--CCCCChHHC---CCHHHHHHHHHHHHHHhCCC
Confidence 84 33 5899996 455533111 34678999999999999854
No 35
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.93 E-value=0.00014 Score=60.73 Aligned_cols=111 Identities=14% Similarity=-0.012 Sum_probs=76.5
Q ss_pred eEeccCCceeEEEEEEeCCCeEEEEecCcccc--ccCCC--CCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC-----
Q 045250 37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVR--CIGES--WPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR----- 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r--~~~~~--~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~----- 107 (165)
+++..+.+ |+|++..+..+.||+-.+... ....- +..|..+...|++.+..+.+. ...||+++.|-.
T Consensus 30 v~~~~~rr---vvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~-GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 30 FRELEGRR---TLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEV-GVDTMTGVAFGERGSNP 105 (268)
T ss_pred EecCCCce---EEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHc-CCCCCCeeEEEEecCCC
Confidence 44444444 678877645999998866542 11111 124455789999999999886 667777755542
Q ss_pred --CCceEEEecCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhcc
Q 045250 108 --TMSLIGMRYLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 --e~~~~vMEdl~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~t 152 (165)
..+.+|||+++ +..++++.+.+. ... ..+..++|.+++++|...
T Consensus 106 ~~~~s~LVte~l~-~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G 158 (268)
T PRK15123 106 ATRTSFIITEDLA-PTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG 158 (268)
T ss_pred ccceeEEEEeeCC-CCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 34789999999 677888887542 111 257789999999999875
No 36
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.91 E-value=0.00011 Score=60.90 Aligned_cols=99 Identities=18% Similarity=0.150 Sum_probs=76.3
Q ss_pred CcceeEeccCCceeEEEEEEeCCCeEEEEecC-ccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--CC
Q 045250 33 DDLTIKEVGDGNLNFVYIVVGTSGSFVIKQAL-PYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR--TM 109 (165)
Q Consensus 33 ~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~-p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--e~ 109 (165)
+.-+.++++||-+|--|||.+...++.||.-. +++. =...|+.-|+.+++.-...||+++..+. ..
T Consensus 17 ~i~er~~v~gG~inea~~v~dg~~~~FvK~n~~~~~~-----------~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~ 85 (286)
T COG3001 17 EIKEREEVSGGDINEAWRLRDGTDPFFVKCNQREQLS-----------MFTAEADGLELLARSNTITVPKVIAVGASRDH 85 (286)
T ss_pred hhhcccccCCccccceeEeecCCcceEEEecchhhHH-----------HHHHHHHHHHHHHhcCCccccceEEecCCCCe
Confidence 44588999999999999999876678777432 2221 1345666688888876688999998765 56
Q ss_pred ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts 153 (165)
+.+|||||+. |..+++-+.++|.-||++|..+.
T Consensus 86 sylVle~L~~-----------~~~d~~~~~~~GqqLA~LH~~~~ 118 (286)
T COG3001 86 SYLVLEYLPT-----------GPLDAHSAFILGQQLARLHQWGG 118 (286)
T ss_pred eEEEEeeccC-----------CCCCchhHHHHHHHHHHHHhhcC
Confidence 7899999983 45567788999999999999874
No 37
>PRK09902 hypothetical protein; Provisional
Probab=97.86 E-value=0.00039 Score=56.51 Aligned_cols=111 Identities=12% Similarity=0.047 Sum_probs=84.8
Q ss_pred CceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------CCceEEEec
Q 045250 43 GNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------TMSLIGMRY 116 (165)
Q Consensus 43 Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------e~~~~vMEd 116 (165)
|-..=|+|+...+..+-|||-..+++.. .-.|++..=...|...|+.+.+. ...||++.++.. -.+.||.|+
T Consensus 29 gG~SgV~r~~~~g~~~ylKrq~nhl~~s-~r~P~g~ptf~rE~~~L~~L~~~-GvPVP~pvf~~~~k~~~~~rA~LVTe~ 106 (216)
T PRK09902 29 NGMSGVQCVERNGKKLYVKRMTHHLFHS-VRYPFGRPTIVREVAVIKELERA-GVIVPKIVFGEAVKIEGEWRALLVTED 106 (216)
T ss_pred CCcceEEEEEeCCcEEEEEeccCccccc-ccCCCCchHHHHHHHHHHHHHHc-CCCCCccceeeeeccCCceEEEEEEEe
Confidence 5555689998775589999999999742 22366666677899999999986 333999997652 348899999
Q ss_pred CCCCchHHHHHHHcCCCC-------HHHHHHHHHHHHHHHhcc---cccc
Q 045250 117 LEPPHIILRKGLIAGIKY-------PLLAEHMSEFMAKTLFYT---SLLY 156 (165)
Q Consensus 117 l~~~~~~lr~~l~~g~~~-------~~~a~~iG~~La~~h~~t---sd~~ 156 (165)
|+ ++.+|-+.+.++... ..+-.++|..++++|... .|++
T Consensus 107 L~-g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly 155 (216)
T PRK09902 107 MA-GFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCY 155 (216)
T ss_pred CC-CCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence 99 799998887775542 368899999999999876 4544
No 38
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=97.80 E-value=0.00034 Score=54.54 Aligned_cols=109 Identities=17% Similarity=0.037 Sum_probs=72.3
Q ss_pred EeccCCceeEEEEEEeCCC-eEEEEecCccccccCC---------C-------C---CCChHHHHHHHHHHHHhhccCCC
Q 045250 38 KEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGE---------S-------W---PMTKERAYFEALALKEHGKLCPD 97 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~---------~-------~---~l~~~R~~~E~~~L~~~~~~~p~ 97 (165)
.++|.|..-.||++.+.+| .++||.-.+-...... . + .+...+...|++.|+.+... ..
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i 81 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA-GV 81 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 4688999999999998777 9999987765321000 0 0 01133456788888887653 44
Q ss_pred CCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHh
Q 045250 98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 98 ~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~ 150 (165)
.+|.++.++ ..++||||++. .......+.++... ..++.++...|..+|.
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g-~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~ 135 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGD-DGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQ 135 (190)
T ss_pred CCceEEEec--CCEEEEEEecC-CCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 678888765 35899999983 32222223334332 3678889999999998
No 39
>PRK11768 serine/threonine protein kinase; Provisional
Probab=97.73 E-value=0.00066 Score=57.62 Aligned_cols=125 Identities=14% Similarity=0.053 Sum_probs=81.1
Q ss_pred CccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHH
Q 045250 5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYF 83 (165)
Q Consensus 5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~ 83 (165)
.|..||++.|.+-+...|... . -.+.. =++.-|.||+|.+++| .+|+|...|-- | +.+-...
T Consensus 7 ~~~~l~p~~~~~a~~~~g~~~------~--~~~~~-l~s~eN~vy~v~~~~~~~~vlKv~r~~~------~--~~~~i~~ 69 (325)
T PRK11768 7 PFQTLTPDLILDALESLGLRV------D--GRLLA-LNSYENRVYQFGDEDGRRVVAKFYRPER------W--SDAQILE 69 (325)
T ss_pred CCCCCChHHHHHHHHHcCCCC------c--cceEe-eccccceEEEEecCCCCEEEEEEcCccc------C--CHHHHHH
Confidence 789999999999998776421 1 12333 3455699999998877 89999876432 1 3355678
Q ss_pred HHHHHHHhhcc-CCCCCce------EEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 045250 84 EALALKEHGKL-CPDHVPE------VYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL 155 (165)
Q Consensus 84 E~~~L~~~~~~-~p~~vP~------v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~ 155 (165)
|.+++..+.+. +|...|. +..++ ...+.+++++++ ... ....+...+++|++||++|..+...
T Consensus 70 E~~~l~~L~~~gipv~~p~~~~G~~~~~~~-g~~~~l~~~~~G--~~~------~~~~~~~~~~lG~~LarlH~~~~~~ 139 (325)
T PRK11768 70 EHAFALELAEAEIPVVAPLAFNGQTLHEHQ-GFRFALFPRRGG--RAP------ELDNLDQLEWVGRFLGRIHQVGAKR 139 (325)
T ss_pred HHHHHHHHHHCCCCCCCCccCCCCEEEEEC-CEEEEEEeeeCC--CCC------CCCCHHHHHHHHHHHHHHHhhccCC
Confidence 88898888763 4533331 12221 234556666652 111 0123567899999999999987743
No 40
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=97.71 E-value=0.00013 Score=60.24 Aligned_cols=109 Identities=17% Similarity=0.042 Sum_probs=69.8
Q ss_pred cCCceeEEEEEEeC------CC----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhc----cCC------CCCc
Q 045250 41 GDGNLNFVYIVVGT------SG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGK----LCP------DHVP 100 (165)
Q Consensus 41 ~~Gn~N~v~rV~~~------~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~----~~p------~~vP 100 (165)
|+|.+..+|||+.. ++ ++|||-...-... .+..-...=...|..+++.+.. +.+ ..+|
T Consensus 2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~--~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P 79 (294)
T PF02958_consen 2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSR--REFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFP 79 (294)
T ss_pred CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhh--hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeec
Confidence 78999999999762 11 8999997621110 1122223344556666654433 222 3589
Q ss_pred eEEEEcCCC--ceEEEecCCC-CchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250 101 EVYHFDRTM--SLIGMRYLEP-PHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 101 ~v~~~D~e~--~~~vMEdl~~-~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd 154 (165)
++|+.+.+. .++|||||.. ++... .. .......-++.+-+.||++|..+-.
T Consensus 80 ~~~~~~~~~~~~~lvlEDL~~~g~~~~-~~--~~~l~~~~~~~~l~~LA~fHA~s~~ 133 (294)
T PF02958_consen 80 KCYYADEDPGDEVLVLEDLSEKGYRMG-DR--RDGLDLEHAELVLKKLAKFHAASWA 133 (294)
T ss_pred eEEEeccCCCceeeehhhhhhcCCccc-cc--ccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999988664 5999999985 33322 11 1124567789999999999998754
No 41
>PRK06148 hypothetical protein; Provisional
Probab=97.63 E-value=0.0014 Score=63.76 Aligned_cols=128 Identities=13% Similarity=0.158 Sum_probs=88.4
Q ss_pred ccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHH
Q 045250 8 PLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEAL 86 (165)
Q Consensus 8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~ 86 (165)
.++.+.+.+-+.++= +.. -++++|++. -|.+|+|+.++| .+|+|...|-- +......|.+
T Consensus 10 ~~s~~~~~~~~~~~y------gl~---~~~~~L~s~-~d~nf~v~~~~g~~yVLKi~~~~~---------~~~~~~~q~~ 70 (1013)
T PRK06148 10 EFTTKDAEALLAQHF------GIS---ATATPLDGE-RDLNFRLTTDDGADYILKIVNPSE---------PRVESDFQTA 70 (1013)
T ss_pred CCCHHHHHHHHHHHc------CCc---eEEeecCCc-CCceEEEEeCCCCeEEEEEcCCcc---------chhHHHHHHH
Confidence 478888888888752 111 256888665 499999998888 99999988631 2235556677
Q ss_pred HHHHhhccCCC-CCceEEEEcC----------C---CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 87 ALKEHGKLCPD-HVPEVYHFDR----------T---MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 87 ~L~~~~~~~p~-~vP~v~~~D~----------e---~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
+|..+.+..|. .||+++.-.. + ..+-+|++++ +..|.+. ....+....++|++||++|..+
T Consensus 71 ~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~--G~~l~~~---~~~t~~~~~~lG~~larlh~al 145 (1013)
T PRK06148 71 ALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRLLRLLSWLP--GTPLAEA---APRTEALLDNLGRALGRLDRAL 145 (1013)
T ss_pred HHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEEEEEEeccC--CCcHHhc---cCCCHHHHHHHHHHHHHHHHHH
Confidence 88877765333 3666553221 1 2466899998 4555431 3345789999999999999999
Q ss_pred cccccCc
Q 045250 153 SLLYRTT 159 (165)
Q Consensus 153 sd~~l~~ 159 (165)
++|.-+.
T Consensus 146 ~~F~~p~ 152 (1013)
T PRK06148 146 QGFMHPG 152 (1013)
T ss_pred hcCCCCC
Confidence 9987554
No 42
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=97.58 E-value=0.00026 Score=56.18 Aligned_cols=101 Identities=22% Similarity=0.198 Sum_probs=59.0
Q ss_pred EEEEEeCCC-eEEEEecCccccc----------c--------CCCC-CCChHHHHHHHHHHHHhhccCCCCCceEEEEcC
Q 045250 48 VYIVVGTSG-SFVIKQALPYVRC----------I--------GESW-PMTKERAYFEALALKEHGKLCPDHVPEVYHFDR 107 (165)
Q Consensus 48 v~rV~~~~g-svIvKqa~p~~r~----------~--------~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~ 107 (165)
||.+...+| .++||-=+..... . ...| .+...|+..|++.|+.+.+. ...||++|.++
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~-Gv~vP~p~~~~- 79 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEA-GVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCT-T-SS--EEEEE-
T ss_pred EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHC-CccCCcEEEEe-
Confidence 677777766 6888865432110 0 0123 45677889999999999885 67799999664
Q ss_pred CCceEEEecCCCCchH---HHHHHHcCCCCHHHHHHHHHHHHHH-Hhc
Q 045250 108 TMSLIGMRYLEPPHII---LRKGLIAGIKYPLLAEHMSEFMAKT-LFY 151 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~---lr~~l~~g~~~~~~a~~iG~~La~~-h~~ 151 (165)
.+++||||+++++.. |++.-........+..++...+..+ |..
T Consensus 80 -~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~ 126 (188)
T PF01163_consen 80 -RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKA 126 (188)
T ss_dssp -TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCT
T ss_pred -CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhc
Confidence 899999999933333 3333222234456777777755554 443
No 43
>smart00090 RIO RIO-like kinase.
Probab=97.56 E-value=0.00077 Score=54.89 Aligned_cols=110 Identities=15% Similarity=0.027 Sum_probs=73.1
Q ss_pred EeccCCceeEEEEEE--eCCC-eEEEEecCccccccC--CCCC----------CC-----hHHHHHHHHHHHHhhccCCC
Q 045250 38 KEVGDGNLNFVYIVV--GTSG-SFVIKQALPYVRCIG--ESWP----------MT-----KERAYFEALALKEHGKLCPD 97 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~--~~~g-svIvKqa~p~~r~~~--~~~~----------l~-----~~R~~~E~~~L~~~~~~~p~ 97 (165)
+.+|.|..--||++. ..+| .++||...+-..... ..|. .+ ..+...|++.|+.+.. ...
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~-~~i 112 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE-AGV 112 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 579999999999998 3466 899998775431100 0010 01 1245679999988875 245
Q ss_pred CCceEEEEcCCCceEEEecCCCCchHHHHHHHc-CCCC----HHHHHHHHHHHHHHHhcc
Q 045250 98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIA-GIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 98 ~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~-g~~~----~~~a~~iG~~La~~h~~t 152 (165)
.+|+++.+. .+.+|||+++. ..+...+.. +... ..++.+|...|+.+|...
T Consensus 113 ~~p~~~~~~--~~~lV~E~~~g--~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g 168 (237)
T smart00090 113 PVPKPIAWR--RNVLVMEFIGG--DGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEG 168 (237)
T ss_pred CCCeeeEec--CceEEEEEecC--CcccccccccCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 679988764 56899999983 233332222 2211 268899999999999877
No 44
>PTZ00384 choline kinase; Provisional
Probab=97.52 E-value=0.00058 Score=59.70 Aligned_cols=110 Identities=14% Similarity=0.096 Sum_probs=74.5
Q ss_pred CCCcceeEeccCCceeEEEEEEeCCC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC
Q 045250 31 KFDDLTIKEVGDGNLNFVYIVVGTSG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR 107 (165)
Q Consensus 31 ~~~~~~v~~l~~Gn~N~v~rV~~~~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~ 107 (165)
+.+.+++++++||-.|.+|+|+..++ ...+|.-+ +|+.|..-.+-.+| ..|.++++.+++ -+..|++|+.++
T Consensus 49 ~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl--~R~~g~~~~l~IdR-~~E~~i~~~Ls~--~glgP~l~~~f~ 123 (383)
T PTZ00384 49 NPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVC--IKKSSTYNSLVIDN-DLQYNIAKLLGD--NNFGPKIIGRFG 123 (383)
T ss_pred CcccEEEEEeCCcccceEEEEEecCCCCCccccceEE--EEeccCCCceEecc-HHHHHHHHHHHh--CCCCCeEEEecC
Confidence 45678999999999999999986532 22222200 11112222333455 567888888876 367899999996
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
+.++.|++. +..+-..- -..|.+...|++.||++|...
T Consensus 124 --~g~l~efIe--Gr~l~~~d---l~~p~~~~~IA~~La~lH~~~ 161 (383)
T PTZ00384 124 --DFTIQEWVE--GNTMGIDS---LQNLSVLTGIASSLAKFHKRV 161 (383)
T ss_pred --CEEEEEEec--cccCChhH---hcCHHHHHHHHHHHHHHhccc
Confidence 469999998 33443311 135778999999999999964
No 45
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=97.49 E-value=0.0016 Score=51.14 Aligned_cols=109 Identities=15% Similarity=0.036 Sum_probs=67.9
Q ss_pred EeccCCceeEEEEEEeCCC-eEEEEecCccccccCCC-------CC------------CChHHHHHHHHHHHHhhccCCC
Q 045250 38 KEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGES-------WP------------MTKERAYFEALALKEHGKLCPD 97 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~-------~~------------l~~~R~~~E~~~L~~~~~~~p~ 97 (165)
..||.|..-.||++.+.+| .++||.-.+-......+ -. +...+...|++.|+.+... ..
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~v 81 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA-GI 81 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 3588899999999998777 89999876532110000 00 0112344588888888652 22
Q ss_pred CCceEEEEcCCCceEEEecCCCCchHHHHHHH-cCCCC----HHHHHHHHHHHHHH-Hhc
Q 045250 98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLI-AGIKY----PLLAEHMSEFMAKT-LFY 151 (165)
Q Consensus 98 ~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~-~g~~~----~~~a~~iG~~La~~-h~~ 151 (165)
.+|.++.+ ..+.+||||++ + ..+..... .+... ..++.+++..|+.+ |..
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~-g-~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~ 137 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIG-D-DGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC 137 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeC-C-CCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 46777654 45689999998 3 34433322 33322 24678888999988 553
No 46
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=97.48 E-value=0.00043 Score=57.41 Aligned_cols=101 Identities=15% Similarity=0.056 Sum_probs=77.2
Q ss_pred eccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecC
Q 045250 39 EVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYL 117 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl 117 (165)
++.+|..++|+.|...+| ..|+|.+.|.-... .-..+..+|+.+.. .-+.+++..|++..++.||.+
T Consensus 9 ~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~~---------~E~~g~~~L~~w~G---~GaVrll~~d~~~~AlLLErl 76 (253)
T PF04655_consen 9 PPAHGSSSLVVPVRRADGTPAVLKLAPPHAEAE---------HEARGEAALRWWNG---RGAVRLLAADPERGALLLERL 76 (253)
T ss_pred CCCCCcceEEEEEEcCCCCeEEEEecCCcccch---------hhhhHHhHhheeCC---CCceeeeccccccchhhhhhc
Confidence 467999999999999998 89999999877542 11223355776654 234699999999999999999
Q ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250 118 EPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 118 ~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts 153 (165)
. ....|.+...+|.. ....+.++..+.++|....
T Consensus 77 ~-~g~~L~~~~~~g~d-~~a~~i~a~l~~~L~~~~~ 110 (253)
T PF04655_consen 77 D-PGRSLASLPREGDD-DEATRIAAGLLRRLHRPAP 110 (253)
T ss_pred c-CCCchhhcccccCc-hHHHHHHHHHHHHHhCCCC
Confidence 6 36788775544443 4668889999999999865
No 47
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=97.45 E-value=0.0038 Score=49.74 Aligned_cols=105 Identities=19% Similarity=0.085 Sum_probs=74.7
Q ss_pred eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM 114 (165)
-.+.+|.|....||++.+..+ .+++|...+.- ...++...|.++|+.+.. |..+|-...+......++|
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~--------~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~v~ 79 (260)
T cd05069 10 LDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT--------MMPEAFLQEAQIMKKLRH--DKLVPLYAVVSEEPIYIVT 79 (260)
T ss_pred eeeeecCcCCCeEEEEEEcCCceEEEEEcccCC--------ccHHHHHHHHHHHHhCCC--CCeeeEEEEEcCCCcEEEE
Confidence 345688888889999988765 78888754321 233677788888887753 6667766677778888999
Q ss_pred ecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t 152 (165)
|+++ ..+|.+.+.+.. .. -.++.++...|+.+|...
T Consensus 80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05069 80 EFMG--KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN 122 (260)
T ss_pred EcCC--CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9998 346777665422 11 357788999999999754
No 48
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=97.42 E-value=0.0019 Score=53.38 Aligned_cols=92 Identities=16% Similarity=0.065 Sum_probs=64.4
Q ss_pred EEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------cCCCceEEEecCC
Q 045250 47 FVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--------DRTMSLIGMRYLE 118 (165)
Q Consensus 47 ~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------D~e~~~~vMEdl~ 118 (165)
-||+|.+++|+.|+|... .+.++...|.++++.+.+. ...||+++.- ..+....+||+++
T Consensus 11 ~v~~v~t~~g~~~LK~~~-----------~~~~~~~~~~~~~~~L~~~-g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~ 78 (313)
T TIGR02906 11 NVYKVETDSGNKCLKKIN-----------YPPERLLFILGAQEHLRKN-GFNIPKILKTKDGELYVKYNGDLYVLTEWIE 78 (313)
T ss_pred cEEEEEeCCCCeEEEEcC-----------CCHHHHHHHHHHHHHHHHc-CCCCCceeecCCCCEEEEECCEEEEEehhcc
Confidence 499999888899999752 1236778889888888663 1245555532 2345678889998
Q ss_pred CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccC
Q 045250 119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT 158 (165)
Q Consensus 119 ~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~ 158 (165)
+ ..+- ...+..+.++|+.||++|..+.++..+
T Consensus 79 G--~~~~------~~~~~~~~~~g~~La~lH~~~~~~~~~ 110 (313)
T TIGR02906 79 G--RECD------FNNPIDLKKAAKGLALFHHASKGYVPP 110 (313)
T ss_pred C--cCCC------CCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 3 2221 123567899999999999999988544
No 49
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=97.34 E-value=0.0033 Score=47.94 Aligned_cols=109 Identities=17% Similarity=0.119 Sum_probs=69.0
Q ss_pred EeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCC-----------------CCChHHHHHHHHHHHHhhccCCCCC
Q 045250 38 KEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESW-----------------PMTKERAYFEALALKEHGKLCPDHV 99 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~-----------------~l~~~R~~~E~~~L~~~~~~~p~~v 99 (165)
..+|.|+...||++.+.+| .++||.-.+-.......+ .+....+..|.+.+..+... ...+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~ 81 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA-GVPV 81 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc-CCCC
Confidence 4688999999999998866 899997554322110001 11122334566666666553 3468
Q ss_pred ceEEEEcCCCceEEEecCCCCc---hHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Q 045250 100 PEVYHFDRTMSLIGMRYLEPPH---IILRKGLIAGIKYPLLAEHMSEFMAKTLF 150 (165)
Q Consensus 100 P~v~~~D~e~~~~vMEdl~~~~---~~lr~~l~~g~~~~~~a~~iG~~La~~h~ 150 (165)
|+++.++ ...++||+++.+. ..+...... ...-.++.++...+..+|.
T Consensus 82 ~~~~~~~--~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~ 132 (187)
T cd05119 82 PKPIDLN--RHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYR 132 (187)
T ss_pred CceEecC--CCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhh
Confidence 8888664 5799999998311 345443322 2234688889999999997
No 50
>PTZ00296 choline kinase; Provisional
Probab=97.30 E-value=0.0019 Score=57.55 Aligned_cols=105 Identities=15% Similarity=0.079 Sum_probs=75.3
Q ss_pred CCCcceeEeccCCceeEEEEEEeCCC----------eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc
Q 045250 31 KFDDLTIKEVGDGNLNFVYIVVGTSG----------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP 100 (165)
Q Consensus 31 ~~~~~~v~~l~~Gn~N~v~rV~~~~g----------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP 100 (165)
+.+++++++++||-.|.+|+|+..++ +++++.- |++-..-.+| ..|..+++.+++. +..|
T Consensus 104 ~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiy-------G~~te~lIdR-~~E~~v~~~ls~~--gi~P 173 (442)
T PTZ00296 104 TEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIY-------GKDVDELYNP-ISEFEVYKTMSKY--RIAP 173 (442)
T ss_pred CcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEec-------CCCccceeCH-HHHHHHHHHHHHC--CCCC
Confidence 44578999999999999999986532 4555443 3332222355 5688899888874 6788
Q ss_pred eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 101 ~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
++|.. .....|.|++. + ..|+..=+ ..|...+.|+..|+++|...
T Consensus 174 ~l~~~--f~gg~I~efi~-g-~~l~~~dl---~~~~~~~~iA~~L~~lH~~~ 218 (442)
T PTZ00296 174 QLLNT--FSGGRIEEWLY-G-DPLRIDDL---KNPSILIGIANVLGKFHTLS 218 (442)
T ss_pred ceEEE--eCCCEEEEeeC-C-ccCCHHHc---CCHHHHHHHHHHHHHHhccc
Confidence 88854 45788899998 3 55554222 34678999999999999875
No 51
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=97.24 E-value=0.00083 Score=53.76 Aligned_cols=66 Identities=15% Similarity=0.066 Sum_probs=46.0
Q ss_pred HHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCC---chHHHHHHHcCCCCHHHHHHHHHHHHHH-Hhc
Q 045250 83 FEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP---HIILRKGLIAGIKYPLLAEHMSEFMAKT-LFY 151 (165)
Q Consensus 83 ~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~---~~~lr~~l~~g~~~~~~a~~iG~~La~~-h~~ 151 (165)
.|++.|+.+.+. ...||+++.+ ..+++||||++++ ...|++....-.....+..+++..|+++ |..
T Consensus 75 kE~r~L~rl~~~-Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~ 144 (197)
T cd05146 75 KEMHNLKRMQKA-GIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC 144 (197)
T ss_pred HHHHHHHHHHHc-CCCCCeEEEe--cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 577789888885 6789999966 7899999999842 2345543322111235668888888888 554
No 52
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=97.14 E-value=0.01 Score=47.10 Aligned_cols=105 Identities=20% Similarity=0.114 Sum_probs=72.8
Q ss_pred eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM 114 (165)
-++.+|.|....||++...++ .+++|.-.+.. ...++...|..+|+.+.. |..++-.-.+..+...++|
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~lv~ 79 (260)
T cd05070 10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT--------MSPESFLEEAQIMKKLRH--DKLVQLYAVVSEEPIYIVT 79 (260)
T ss_pred hhheeccccCceEEEEEecCCceeEEEEecCCC--------CCHHHHHHHHHHHHhcCC--CceEEEEeEECCCCcEEEE
Confidence 356788898899999988766 78888755421 123567788888887753 4444444445666778999
Q ss_pred ecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
|+++ ...|.+.+.+.. .. -.++.++...|+-+|...
T Consensus 80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05070 80 EYMS--KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 122 (260)
T ss_pred EecC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 357777765422 11 357778888888888764
No 53
>PRK06149 hypothetical protein; Provisional
Probab=97.12 E-value=0.0096 Score=57.75 Aligned_cols=128 Identities=16% Similarity=0.136 Sum_probs=85.9
Q ss_pred ccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHH
Q 045250 8 PLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALA 87 (165)
Q Consensus 8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~ 87 (165)
.++.+++...|.++--+ + -++.+++ |.-|.+|+|+.+++++|+|...|.. +......|..+
T Consensus 16 ~ls~~~~~~ll~~~ygl------~---~~~~~L~-s~~d~nf~v~t~~~~yVLKi~~~~~---------~~~~l~~e~~~ 76 (972)
T PRK06149 16 DVSEAQAERILAEHYGL------S---GTLTELG-SQQDRNFRVDSDGGRFVLKICHAAY---------AAVELEAQHAA 76 (972)
T ss_pred CCCHHHHHHHHHHhcCC------c---eEEEecC-CcCcceEEEEecCCcEEEEeCCccC---------ChHHHHHHHHH
Confidence 48889999999764211 1 2467774 5557889999887799999988622 22467788889
Q ss_pred HHHhhccCCC-CCceEEEEcC------------CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250 88 LKEHGKLCPD-HVPEVYHFDR------------TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 88 L~~~~~~~p~-~vP~v~~~D~------------e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd 154 (165)
|+.+.+-.|. .||+++---. ...+-+++|++ +..+.+ .....+..+.++|+++|++|..++|
T Consensus 77 l~hL~~~~~glpvp~pi~t~~G~~~~~~~~~g~~~~vrL~~~l~--G~~~~~---~~~~~~~~~~~lG~~lArlh~al~~ 151 (972)
T PRK06149 77 LRHLAEREPALRVPVVIPALDGEELLTLDVRGQGLRVRLLDYLP--GQPLTR---LGHLAPASVAGLGALCARVARALAD 151 (972)
T ss_pred HHHHHhhCCCCCCceeeECCCCCeEEEEecCCceEEEEEEEecC--Cccccc---cCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 9888765322 3454442111 22467888898 333322 1234578899999999999999999
Q ss_pred cccCc
Q 045250 155 LYRTT 159 (165)
Q Consensus 155 ~~l~~ 159 (165)
|.-+.
T Consensus 152 f~hp~ 156 (972)
T PRK06149 152 FDHPG 156 (972)
T ss_pred CCCCC
Confidence 97543
No 54
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=97.07 E-value=0.017 Score=46.23 Aligned_cols=105 Identities=18% Similarity=0.062 Sum_probs=72.2
Q ss_pred eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM 114 (165)
-.+.+|.|...-||++.+.++ .+.||...+.. ...++...|.++|+.+.. |..++-.-.+..+...+||
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~--------~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~lv~ 79 (262)
T cd05071 10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAFLQEAQVMKKLRH--EKLVQLYAVVSEEPIYIVT 79 (262)
T ss_pred EeeecCCCCCCcEEEEEecCCceEEEEecccCc--------cCHHHHHHHHHHHHhCCC--CCcceEEEEECCCCcEEEE
Confidence 355688888889999987655 78888865311 234577788888888753 5444444445667778999
Q ss_pred ecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|+++ ..+|++.+.+. ... ..++.++...|+.+|...
T Consensus 80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 122 (262)
T cd05071 80 EYMS--KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 122 (262)
T ss_pred EcCC--CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34677777642 211 357788888999998754
No 55
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=97.06 E-value=0.0071 Score=47.05 Aligned_cols=110 Identities=18% Similarity=0.142 Sum_probs=71.1
Q ss_pred eEeccCCceeEEEEEEeCCC-eEEEEecCcccccc--------------CCCC-CCChHHHHHHHHHHHHhhccCCCCCc
Q 045250 37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCI--------------GESW-PMTKERAYFEALALKEHGKLCPDHVP 100 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~--------------~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP 100 (165)
.+.++.|....||++...+| .++||...+-.... -.+| .....+...|..++..+... ...+|
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~v~ 98 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE-GFPVP 98 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc-CCCCC
Confidence 46799999999999998767 89999743211000 0111 11223456677788777553 23678
Q ss_pred eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 101 ~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
.++. .....++||+++ +..|..... ......++.++...+..+|...
T Consensus 99 ~~~~--~~~~~lv~e~~~--g~~L~~~~~-~~~~~~~~~~i~~~l~~lh~~g 145 (198)
T cd05144 99 KPID--WNRHAVVMEYID--GVELYRVRV-LEDPEEVLDEILEEIVKAYKHG 145 (198)
T ss_pred ceee--cCCceEEEEEeC--Ccchhhccc-cccHHHHHHHHHHHHHHHHHCC
Confidence 8774 456789999998 345544322 1234578899999999999753
No 56
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=96.95 E-value=0.02 Score=45.37 Aligned_cols=103 Identities=14% Similarity=0.060 Sum_probs=69.9
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--E-cCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--F-DRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~-D~e~~~~ 112 (165)
-.+.+|.|....||++...+..+++|..... ....+...|+..|+.+.. |..++ ++. + +.....+
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~---------~~~~~~~~e~~~l~~l~~--~~i~~-~~~~~~~~~~~~~l 77 (256)
T cd05082 10 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKND---------ATAQAFLAEASVMTQLRH--SNLVQ-LLGVIVEEKGGLYI 77 (256)
T ss_pred eeeeecccCCCeEEEEEEcCCcEEEEEeCCC---------chHHHHHHHHHHHHhCCC--CCeee-EEEEEEcCCCceEE
Confidence 3577899988999999877558898975321 224567788888887743 44344 332 2 3345679
Q ss_pred EEecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...|.+.+.+... . -.++.+|...|+-+|...
T Consensus 78 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 122 (256)
T cd05082 78 VTEYMA--KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN 122 (256)
T ss_pred EEECCC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 3477777665321 1 256778899999999765
No 57
>PRK12274 serine/threonine protein kinase; Provisional
Probab=96.90 E-value=0.01 Score=48.32 Aligned_cols=103 Identities=16% Similarity=0.165 Sum_probs=69.3
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCC---CCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESW---PMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~---~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~ 112 (165)
.++.++-|...-|+.+..++.+++. +-+. +..| .+...|...|+++|+.+.. +..+|+++.+ ..+.+
T Consensus 6 ~~~~l~~~~f~~v~~~~~~~~k~~~----~~l~--~~~~~~~~~~~~l~~rE~~iL~~L~~--~~~vP~ll~~--~~~~l 75 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRGGERKFVR----RDLS--AAPWWLRGVAWWLARREALALRQLDG--LPRTPRLLHW--DGRHL 75 (218)
T ss_pred cceeecCCCcceEEEeecCCceeee----cccc--cchhhhhhHHHHHHHHHHHHHHhcCC--CCCCCEEEEE--cCEEE
Confidence 4566777777788877775446552 1222 1223 2223467889999998865 3678999977 56899
Q ss_pred EEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
+|||+. +..|.+.+..+ ...+..++...|..+|...
T Consensus 76 vmeyI~--G~~L~~~~~~~--~~~~~~qi~~~L~~lH~~G 111 (218)
T PRK12274 76 DRSYLA--GAAMYQRPPRG--DLAYFRAARRLLQQLHRCG 111 (218)
T ss_pred EEeeec--CccHHhhhhhh--hHHHHHHHHHHHHHHHHCc
Confidence 999997 45666544333 2356788888999999764
No 58
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=96.88 E-value=0.025 Score=41.86 Aligned_cols=101 Identities=18% Similarity=0.109 Sum_probs=73.0
Q ss_pred ccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEEEe
Q 045250 40 VGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT--MSLIGMR 115 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e--~~~~vME 115 (165)
+|.|..+-||++...+ | .++||...+... ....++...|.+.|+.+.. ..+|+++.+... ...++||
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~------~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~~~~~~~~~e 71 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDS------SSLLEELLREIEILKKLNH---PNIVKLYGVFEDENHLYLVME 71 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccc------hhHHHHHHHHHHHHHhcCC---CCeeeEeeeeecCCeEEEEEe
Confidence 5788889999999874 4 899998664332 1145678888888887765 466666655554 8899999
Q ss_pred cCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 045250 116 YLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~ 151 (165)
+++ ...|.+.+... ... -.++.++...|+.+|..
T Consensus 72 ~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 111 (215)
T cd00180 72 YCE--GGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN 111 (215)
T ss_pred cCC--CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 998 35777777654 232 25778888888888876
No 59
>PRK09188 serine/threonine protein kinase; Provisional
Probab=96.88 E-value=0.014 Score=50.84 Aligned_cols=106 Identities=14% Similarity=-0.003 Sum_probs=71.9
Q ss_pred eeEeccCCceeEEEEEEeC--CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~ 112 (165)
-...||.|..-.||++... +| .+.||.-.+.... .......++...|+++|+.+.. |..+|.++.+ ....+
T Consensus 22 ~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~--~~~~~~~~~~~~E~~iL~~L~h--~~iv~~l~~~--~~~~L 95 (365)
T PRK09188 22 ETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPW--WSKPLARHLAAREIRALKTVRG--IGVVPQLLAT--GKDGL 95 (365)
T ss_pred EccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccc--cccHHHHHHHHHHHHHHHhccC--CCCCcEEEEc--CCcEE
Confidence 5567899999999999764 35 4577765422110 0012234668889999988864 5678888754 56899
Q ss_pred EEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ 151 (165)
||||++ +..|.. + .......+..++...|+.+|..
T Consensus 96 VmE~~~--G~~L~~-~-~~~~~~~~~~~i~~aL~~lH~~ 130 (365)
T PRK09188 96 VRGWTE--GVPLHL-A-RPHGDPAWFRSAHRALRDLHRA 130 (365)
T ss_pred EEEccC--CCCHHH-h-CccchHHHHHHHHHHHHHHHHC
Confidence 999997 345642 2 2112257888999999999975
No 60
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=96.87 E-value=0.016 Score=48.09 Aligned_cols=108 Identities=16% Similarity=0.055 Sum_probs=72.7
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~ 112 (165)
+..||.|....||++.+.+ + .++||.-..-.... .-..++...|.+.|+.... |..++.++. .+.+...+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~l 78 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ----DDDVECTMVEKRVLALPGK--PPFLTQLHSCFQTMDRLYF 78 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhcCC--CCceeeeEEEEEcCCEEEE
Confidence 5678999999999998763 4 78999755322110 1234567778887766543 455666543 45677889
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||||++ +..|.+.+.....+ ..++.+|...|+-+|...
T Consensus 79 v~E~~~--~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 121 (324)
T cd05587 79 VMEYVN--GGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG 121 (324)
T ss_pred EEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 34777777654432 235677888888888754
No 61
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=96.87 E-value=0.022 Score=45.46 Aligned_cols=104 Identities=18% Similarity=0.015 Sum_probs=70.4
Q ss_pred eccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM 114 (165)
++|.|....||++... ++ .+++|...+... ....++...|+.+|+.+.. |..++-+-.+..+...+||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~ii~~~~~~~~~~~~lv~ 73 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE------KSVRDEMMREAEIMHQLDN--PYIVRMIGVCEAEALMLVM 73 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC------hHHHHHHHHHHHHHHhcCC--CCeEEEEEEEcCCCeEEEE
Confidence 4788999999998653 33 688887654321 2234677889899987743 4444444455667788999
Q ss_pred ecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
|+++ ..+|.+.+... ... -.++.+|...|+.+|...
T Consensus 74 e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 115 (257)
T cd05115 74 EMAS--GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN 115 (257)
T ss_pred EeCC--CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 9998 35777777542 222 256788888899988764
No 62
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=96.85 E-value=0.012 Score=50.01 Aligned_cols=108 Identities=19% Similarity=0.143 Sum_probs=71.3
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~ 111 (165)
.++.||.|....||++.+. +| .+.||.-...-.. ..-...+...|.++|+.+.. | ++++++. .+.....
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~E~~il~~l~h--p-~iv~~~~~~~~~~~~~ 77 (377)
T cd05629 5 TVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMF----KKDQLAHVKAERDVLAESDS--P-WVVSLYYSFQDAQYLY 77 (377)
T ss_pred EeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHH----HhHHHHHHHHHHHHHHhCCC--C-CcceEEEEEEcCCeeE
Confidence 3678999999999999875 45 7888975421110 11223566778888776542 3 4555543 3566788
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
+||||++ +..|.+.+.....++ .++.++...|..+|...
T Consensus 78 lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g 121 (377)
T cd05629 78 LIMEFLP--GGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLG 121 (377)
T ss_pred EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 347777776655432 25667888888888753
No 63
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=96.82 E-value=0.021 Score=45.16 Aligned_cols=105 Identities=14% Similarity=-0.024 Sum_probs=73.9
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vM 114 (165)
-.+.+|.|....||++...++.++||+...... ...+...|..+|+.+.. |..++-+ +.++.....+||
T Consensus 10 ~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~--------~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 10 LGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST--------AAQAFLAEASVMTTLRH--PNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred ceeeeecCCCceEEEEEecCcEEEEEEeccchh--------HHHHHHHHHHHHHhcCC--cceeeeEEEEcCCCCeEEEE
Confidence 356788999899999998755999998752211 45788888888887753 3333222 345678888999
Q ss_pred ecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
|+++ ...|.+.+.... .. -.++.++...|+-+|...
T Consensus 80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ 122 (256)
T cd05039 80 EYMA--KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN 122 (256)
T ss_pred EecC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9998 347777776543 11 257788888888888765
No 64
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=96.81 E-value=0.021 Score=47.38 Aligned_cols=110 Identities=11% Similarity=-0.003 Sum_probs=73.9
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~ 112 (165)
+..+|.|....||++.+. +| .++||......... . -..++...|.+.++....+--..+.+++. .+.+...+
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~---~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l 79 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-R---DEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF 79 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-h---hHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence 567899999999999875 45 79999865432111 1 23467778888887766543334444443 46677899
Q ss_pred EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
||||++ + ..|...+..+.... .++.+|...|+-+|...
T Consensus 80 v~E~~~-~-~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ 121 (324)
T cd05589 80 VMEYAA-G-GDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENK 121 (324)
T ss_pred EEcCCC-C-CcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 3 46766665554332 46778888888888654
No 65
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=96.77 E-value=0.021 Score=47.38 Aligned_cols=106 Identities=14% Similarity=0.053 Sum_probs=70.4
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM 114 (165)
.||.|....||++... +| .++||.-....... .-..++...|.++|+..... | ++++++. .+.+...+||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~il~~~~~h-p-~i~~~~~~~~~~~~~~lv~ 75 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ----DDDVDCTMTEKRILALAAKH-P-FLTALHCCFQTKDRLFFVM 75 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh----hhHHHHHHHHHHHHHhccCC-C-CccceeeEEEcCCeEEEEE
Confidence 4788888999999876 34 78999865432211 12345667788888765442 3 4444443 3667788999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|+++ ...|...+.+...+ ..++.+|...|.-+|...
T Consensus 76 E~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 116 (321)
T cd05591 76 EYVN--GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG 116 (321)
T ss_pred eCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34777777655433 246778888899999753
No 66
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=96.77 E-value=0.031 Score=44.46 Aligned_cols=105 Identities=18% Similarity=0.075 Sum_probs=71.6
Q ss_pred eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM 114 (165)
-.+.+|.|....||++...++ .+++|.-.+- ....++...|.++|+.+.. |..++-...+......++|
T Consensus 10 ~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~--------~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~v~ 79 (260)
T cd05073 10 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--------SMSVEAFLAEANVMKTLQH--DKLVKLHAVVTKEPIYIIT 79 (260)
T ss_pred EEeEecCccceEEEEEEecCCccEEEEecCCC--------hhHHHHHHHHHHHHHhcCC--CCcceEEEEEcCCCeEEEE
Confidence 567899999999999987665 6777754321 1234677788888887753 5544444444447789999
Q ss_pred ecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|+++ + ..|.+.+... ... -.++.+|...|+-+|...
T Consensus 80 e~~~-~-~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 122 (260)
T cd05073 80 EFMA-K-GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 122 (260)
T ss_pred EeCC-C-CcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9998 3 4677776542 211 246778999999998654
No 67
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=96.76 E-value=0.0084 Score=53.17 Aligned_cols=116 Identities=22% Similarity=0.231 Sum_probs=74.4
Q ss_pred cceeEeccCCceeEEEEEEeCCC-eEEEEecCccccc-cC-----------------CCC-CCChH--------------
Q 045250 34 DLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRC-IG-----------------ESW-PMTKE-------------- 79 (165)
Q Consensus 34 ~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~-~~-----------------~~~-~l~~~-------------- 79 (165)
...-++++.|.+.-|||.++.+| .|+||.-.|-++. .. +.. .++..
T Consensus 119 ~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El 198 (437)
T TIGR01982 119 EFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL 198 (437)
T ss_pred hCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence 34557899999999999999888 8999999887521 00 100 01111
Q ss_pred HHHHHHHHHHHhhccC----CCCCceEEEEcCCCceEEEecCCCCchHHHHHHH---cCCCCHHHHHHHHH-HHHHHHhc
Q 045250 80 RAYFEALALKEHGKLC----PDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLI---AGIKYPLLAEHMSE-FMAKTLFY 151 (165)
Q Consensus 80 R~~~E~~~L~~~~~~~----p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~---~g~~~~~~a~~iG~-~La~~h~~ 151 (165)
....|++.+..+++.. .-.+|++|.--....++||||++ +..+.+.+. .+.....++..+.. ++..+|..
T Consensus 199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~--G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWID--GIPLSDIAALDEAGLDRKALAENLARSFLNQVLRD 276 (437)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeEC--CcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 2345777777776543 23689999665677899999998 344444332 12222457776655 56777653
No 68
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=96.72 E-value=0.047 Score=43.15 Aligned_cols=104 Identities=18% Similarity=0.088 Sum_probs=69.2
Q ss_pred eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEE
Q 045250 37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGM 114 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vM 114 (165)
.+.+|.|....||++...++ .+++|..... ....+....|.++|+.+.. |..++-. ++.+.+...++|
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~--------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRAQIKVAIKAINEG--------AMSEEDFIEEAKVMMKLSH--PKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred eeEecCCcCceEEEEEeccCceEEEEecccC--------CccHHHHHHHHHHHHHCCC--CCceeEEEEEccCCCEEEEE
Confidence 56799999999999988766 7888864311 2334567778888888753 4444433 234455677999
Q ss_pred ecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
||++ ...|.+.+... ... -.++.++...|+-+|...
T Consensus 79 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 120 (256)
T cd05114 79 EFME--NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS 120 (256)
T ss_pred EcCC--CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9997 34666666542 222 246777888888888654
No 69
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.68 E-value=0.035 Score=44.84 Aligned_cols=110 Identities=17% Similarity=0.153 Sum_probs=69.8
Q ss_pred eEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC-c
Q 045250 37 IKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM-S 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~-~ 110 (165)
.+.+|.|....||+|... +| .+++|.-..-.. .......++...|..+|+.+... |..++-...|..+. .
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~~~-~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATI---VQKAKTTEHTRTERQVLEHIRQS-PFLVTLHYAFQTDTKL 80 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhh---hhcchHHHHHHHHHHHHHhcccC-CChhceeeEeecCCeE
Confidence 467899999999999873 45 788887432111 11223446777888888877543 44444333443343 4
Q ss_pred eEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
.+|||+++ ...|.+.+...... . .++.+|...|+-+|...
T Consensus 81 ~lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ 125 (290)
T cd05613 81 HLILDYIN--GGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG 125 (290)
T ss_pred EEEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 59999998 34677777654432 2 34557888888888754
No 70
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=96.67 E-value=0.026 Score=47.47 Aligned_cols=108 Identities=18% Similarity=0.153 Sum_probs=72.0
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
-++.||.|...-||++.+. +| .++||.-..-- ... .-...+...|.++|+.+.. |. +++++ +.+.+...
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~---~~~~~~~~~E~~il~~l~h--~~-iv~~~~~~~~~~~~~ 77 (364)
T cd05599 5 SIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSE-MLE---KEQVAHVRAERDILAEADN--PW-VVKLYYSFQDENYLY 77 (364)
T ss_pred EEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHH-hhh---hhHHHHHHHHHHHHHhCCC--CC-CcceEEEEEcCCeEE
Confidence 3678999999999999886 45 78889764211 000 1123455678888887752 33 33443 34777788
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
+|||+++ +..|.+.+..+..++ .++.+|...|.-+|...
T Consensus 78 lv~E~~~--~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ 121 (364)
T cd05599 78 LIMEYLP--GGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLG 121 (364)
T ss_pred EEECCCC--CcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 357888777655432 35677888888888653
No 71
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=96.66 E-value=0.024 Score=47.19 Aligned_cols=108 Identities=16% Similarity=0.049 Sum_probs=71.4
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~ 112 (165)
...||.|....||++... +| .+.||.-..-... ..-...+...|.++++.... +..++.++. .+.+...+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~l 78 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI----QDDDVECTMVEKRVLALQDK--PPFLTQLHSCFQTVDRLYF 78 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccC--CCchhheeeEEecCCEEEE
Confidence 467899999999999875 45 7889975432211 11234566778777765543 445555543 35566789
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||||++ +..|.+.+.....+ ..++.+|...|+-+|...
T Consensus 79 v~Ey~~--~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ 121 (323)
T cd05615 79 VMEYVN--GGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG 121 (323)
T ss_pred EEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 34676666554332 246778888899999754
No 72
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=96.64 E-value=0.068 Score=43.04 Aligned_cols=108 Identities=12% Similarity=0.023 Sum_probs=69.9
Q ss_pred eEeccCCceeEEEEEEeC--CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------c
Q 045250 37 IKEVGDGNLNFVYIVVGT--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-------D 106 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------D 106 (165)
++.+|.|....||++.+. +| .++||........ .+. ..+...|.+.|+.+..+.-.++++++.+ +
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~--~~~---~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGM---PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC--CCc---hHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 567999999999999873 34 6888865433221 111 2345568888888776543456666643 2
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
.....+|||+++. +|.+.+.... .. -.++.+|...|+-+|...
T Consensus 81 ~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ 130 (290)
T cd07862 81 ETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR 130 (290)
T ss_pred CCcEEEEEccCCC---CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3456799999972 4555554321 21 257888899999999754
No 73
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=96.62 E-value=0.026 Score=44.82 Aligned_cols=110 Identities=15% Similarity=-0.006 Sum_probs=69.7
Q ss_pred eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~v 113 (165)
...+|.|...-||++.+.+| .++||+-....... ..-.-...+...|.+.|+.+.. | .+++++. .+.....++
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~-~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNV-LAAEKEYEKLQEEVDLLKSLKH--V-NIVQYLGTCLDDNTISIF 80 (265)
T ss_pred cceEeccCCeEEEEEEEcCCCeEEEEEeecCccch-hhHHHHHHHHHHHHHHHHhcCC--C-CEeeEeeEeecCCeEEEE
Confidence 35688899999999988777 78999754321100 0000011345567777777653 3 3333443 366778899
Q ss_pred EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ..+|++.+.+... . ..++.++...|+.+|...
T Consensus 81 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (265)
T cd06631 81 MEFVP--GGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC 122 (265)
T ss_pred EecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99998 4578887766332 2 246678888889888754
No 74
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.62 E-value=0.029 Score=46.59 Aligned_cols=109 Identities=13% Similarity=0.095 Sum_probs=70.4
Q ss_pred eEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 045250 37 IKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~ 109 (165)
++.||.|....||+|... +| .+.+|........ ......++...|..+|+.+... | .+++++. .+...
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~~~e~~~l~~l~~~-~-~i~~~~~~~~~~~~ 79 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALV---QKAKTVEHTRTERNVLEHVRQS-P-FLVTLHYAFQTEAK 79 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHh---hhhhHHHHHHHHHHHHHhccCC-C-CcccEEEEEecCCE
Confidence 577999999999999863 34 6778865432111 1123456778888888877542 3 3344433 34455
Q ss_pred ceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
..+||||++ ...|.+.+.++..+ . .++.+|...|+-+|...
T Consensus 80 ~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 125 (332)
T cd05614 80 LHLILDYVS--GGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG 125 (332)
T ss_pred EEEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 679999998 34666766655433 2 45668888899998653
No 75
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=96.61 E-value=0.037 Score=46.91 Aligned_cols=108 Identities=16% Similarity=0.098 Sum_probs=71.5
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
.++.||.|....||++.+. +| .+.||.-...--.. .-...+...|.++|+.+.. | ++++++ +.+.+...
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~h--~-~iv~~~~~~~~~~~~~ 77 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLM----RNQAAHVKAERDILAEADN--E-WVVKLYYSFQDKDNLY 77 (376)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHh----hhhHHHHHHHHHHHHhCCC--C-CcceEEEEEEcCCEEE
Confidence 4778999999999999876 34 78888754221100 1123566678888877643 3 344444 34567778
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
+||||++ +..|.+.+.+.... . .++.+|...|+-+|...
T Consensus 78 lv~E~~~--~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 121 (376)
T cd05598 78 FVMDYIP--GGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMG 121 (376)
T ss_pred EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 45777777665443 2 24667888888888654
No 76
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=96.61 E-value=0.05 Score=43.05 Aligned_cols=105 Identities=19% Similarity=0.089 Sum_probs=71.3
Q ss_pred eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
-++++|.|...-||++...++ .+++|+-.+- ....++...|..+|+.+.. |..++-. +..+.+...++
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~--------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 79 (261)
T cd05072 10 LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG--------TMSVQAFLEEANLMKTLQH--DKLVRLYAVVTKEEPIYII 79 (261)
T ss_pred EeeecCCcCCceEEEEEecCCceEEEEEccCC--------chhHHHHHHHHHHHHhCCC--CCeeeEEEEEcCCCCcEEE
Confidence 467899999999999987766 7888874321 1234677788888887642 3333322 34566777899
Q ss_pred EecCCCCchHHHHHHHc--CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIA--GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~--g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ..+|++.+.. +... -.++.++...|+.+|...
T Consensus 80 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~ 123 (261)
T cd05072 80 TEYMA--KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 123 (261)
T ss_pred EecCC--CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 3467776644 2221 246678889999998654
No 77
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=96.60 E-value=0.06 Score=43.42 Aligned_cols=107 Identities=13% Similarity=0.079 Sum_probs=66.4
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC--
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM-- 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~-- 109 (165)
....+|.|....||++.+. +| .++||....-... .-...+...|.++|+.+... |. +++++. .+.+.
T Consensus 5 ~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-----~~~~~~~~~E~~~l~~l~~~-~~-i~~~~~~~~~~~~~~ 77 (295)
T cd07837 5 KLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-----EGIPPTALREISLLQMLSES-IY-IVRLLDVEHVEEKNG 77 (295)
T ss_pred EeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-----cCCchHHHHHHHHHHHccCC-CC-ccceeeeEeecCCCC
Confidence 3567898998999999876 45 7999975432211 11224566788888877542 33 233332 22222
Q ss_pred ---ceEEEecCCCCchHHHHHHHcC-----CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 110 ---SLIGMRYLEPPHIILRKGLIAG-----IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ---~~~vMEdl~~~~~~lr~~l~~g-----~~~-----~~~a~~iG~~La~~h~~t 152 (165)
..++|||++ . .+++.+... ..+ -.++.+|...|+-+|...
T Consensus 78 ~~~~~lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 130 (295)
T cd07837 78 KPSLYLVFEYLD--S-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG 130 (295)
T ss_pred CceEEEEeeccC--c-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 479999998 2 455555431 111 256788888888888654
No 78
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=96.59 E-value=0.035 Score=46.16 Aligned_cols=109 Identities=15% Similarity=0.045 Sum_probs=71.1
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
-++.+|.|....||++.+. +| .++||.-...... ..-...+...|.++|+... .|..++-. ++.+.+...+
T Consensus 5 ~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~--h~~iv~~~~~~~~~~~~~l 78 (333)
T cd05600 5 ILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF----KLNEVRHVLTERDILTTTK--SEWLVKLLYAFQDDEYLYL 78 (333)
T ss_pred EEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhHHHHHHHHHHHHHhCC--CCCCccEEEEEEcCCEEEE
Confidence 3678999999999999886 35 7889976533211 0112345667888887765 24433332 2345566789
Q ss_pred EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
||||++ +..|.+.+...... . .++.+|...|+.+|...
T Consensus 79 v~e~~~--g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 121 (333)
T cd05600 79 AMEYVP--GGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG 121 (333)
T ss_pred EEeCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 45788877654432 2 35678888888888643
No 79
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=96.57 E-value=0.039 Score=45.87 Aligned_cols=106 Identities=17% Similarity=0.104 Sum_probs=69.3
Q ss_pred eccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~vM 114 (165)
.+|.|....||++.+.+ + .++||.-....... . -...+...|.++|+..... |. +++++ +.+.+...+||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~---~~~~~~~~e~~~l~~~~~h-p~-iv~~~~~~~~~~~~~lv~ 75 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-D---DDVECTMVEKRVLSLAWEH-PF-LTHLYCTFQTKENLFFVM 75 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-c---chHHHHHHHHHHHHhccCC-Cc-CcceEEEEEeCCEEEEEE
Confidence 57888888999998763 4 79999866543211 1 2235667788887665332 33 33333 23556677999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ +..|...+.+.... ..++.+|...|+-+|...
T Consensus 76 ey~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 116 (316)
T cd05619 76 EYLN--GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKG 116 (316)
T ss_pred eCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9998 34777777654322 246778888888888764
No 80
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=96.56 E-value=0.064 Score=42.82 Aligned_cols=108 Identities=16% Similarity=0.089 Sum_probs=71.6
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~ 112 (165)
++.+|.|....||++.+. +| .+++|.-..... .-...+...|...++.+.......+.+++. .+.....+
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP------DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCC------chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 456888999999999875 45 788886432111 123456677888888886533333333443 45566789
Q ss_pred EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||++ ...|.+.+..+... -.++.++...|+-+|...
T Consensus 80 v~e~~~--~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 121 (277)
T cd06917 80 IMEYAE--GGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVG 121 (277)
T ss_pred EEecCC--CCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 35777777666543 246778888888888755
No 81
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=96.54 E-value=0.058 Score=43.29 Aligned_cols=107 Identities=16% Similarity=0.156 Sum_probs=68.4
Q ss_pred Ccc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----
Q 045250 33 DDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF---- 105 (165)
Q Consensus 33 ~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---- 105 (165)
+++ -++.+|.|..+.||++.+. .+ .+++|.-.+... ..++...|...++.+... | .+++++.+
T Consensus 18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--------~~~~~~~e~~~l~~l~~h-~-~i~~~~~~~~~~ 87 (286)
T cd06638 18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD--------IDEEIEAEYNILKALSDH-P-NVVKFYGMYYKK 87 (286)
T ss_pred cceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc--------hHHHHHHHHHHHHHHhcC-C-Ceeeeeeeeeec
Confidence 344 4578999999999999876 34 788886432211 124566788888777543 3 44555543
Q ss_pred ---cCCCceEEEecCCCCchHHHHHHH----cCCCCH-----HHHHHHHHHHHHHHhc
Q 045250 106 ---DRTMSLIGMRYLEPPHIILRKGLI----AGIKYP-----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 106 ---D~e~~~~vMEdl~~~~~~lr~~l~----~g~~~~-----~~a~~iG~~La~~h~~ 151 (165)
+.+...+||||++ ..+|.+.+. .+...+ .++.++...|.-+|..
T Consensus 88 ~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 143 (286)
T cd06638 88 DVKNGDQLWLVLELCN--GGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN 143 (286)
T ss_pred ccCCCCeEEEEEeecC--CCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC
Confidence 3356799999998 346655443 222222 3777888888888864
No 82
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=96.51 E-value=0.04 Score=43.41 Aligned_cols=104 Identities=17% Similarity=0.106 Sum_probs=67.8
Q ss_pred EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEE
Q 045250 38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~v 113 (165)
+.+|.|....||++.+. +| .+++|....... .-...+...|.++|+.+.. |. +++++ +.+.....+|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~lv 71 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP------PDLKAKFLQEARILKQYSH--PN-IVRLIGVCTQKQPIYIV 71 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCC------HHHHHHHHHHHHHHHhCCC--CC-cceEEEEEcCCCCeEEE
Confidence 35788888999999875 45 788886542221 1123567778888887642 43 33343 3466667899
Q ss_pred EecCCCCchHHHHHHHc-CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIA-GI-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~-g~-~~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ..+|.+.+.. +. .. -.++.++...|+-+|...
T Consensus 72 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 114 (252)
T cd05084 72 MELVQ--GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH 114 (252)
T ss_pred Eeecc--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99998 3477776654 32 22 246778888888888654
No 83
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=96.50 E-value=0.033 Score=46.33 Aligned_cols=106 Identities=13% Similarity=0.027 Sum_probs=68.8
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEe
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMR 115 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vME 115 (165)
.+|.|....||++.+. +| .+++|+-....... .-...+...|.++|+.+.. |..++-. .+.+.+...+|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~i~~~~~~~~~~~~~~lv~E 75 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA----KDEVAHTVTESRVLQNTRH--PFLTALKYAFQTHDRLCFVME 75 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hHHHHHHHHHHHHHHhCCC--CCCcceeeEEecCCEEEEEEe
Confidence 4788999999999875 45 79999876443211 1123455667777776643 4333322 2355667789999
Q ss_pred cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|++ ...|...+..+..+ -.++.+|...|+-+|...
T Consensus 76 ~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 115 (323)
T cd05595 76 YAN--GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 115 (323)
T ss_pred CCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 998 34676666655433 246678888888888753
No 84
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=96.50 E-value=0.031 Score=46.41 Aligned_cols=109 Identities=16% Similarity=0.053 Sum_probs=69.4
Q ss_pred eEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCc
Q 045250 37 IKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~ 110 (165)
++.||.|....||+|... .+ .++||.-..-.-. .......+...|.++|+.+.. |..++-. .+.+....
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~~E~~il~~l~h--p~iv~~~~~~~~~~~~ 75 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV---RNQKDTAHTKAERNILEAVKH--PFIVDLIYAFQTGGKL 75 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH---hhhhhHHHHHHHHHHHHhCCC--CchhceeeEEecCCeE
Confidence 356899999999999863 34 6888875421110 011233466778888887753 5444433 23345567
Q ss_pred eEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
.+||||++ ...|.+.+...... . .++.+|...|.-+|...
T Consensus 76 ~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (323)
T cd05584 76 YLILEYLS--GGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG 120 (323)
T ss_pred EEEEeCCC--CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 89999998 45777777655443 2 35667888888888754
No 85
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=96.47 E-value=0.069 Score=42.15 Aligned_cols=103 Identities=14% Similarity=-0.058 Sum_probs=70.3
Q ss_pred eEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 045250 37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRY 116 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEd 116 (165)
.+.+|.|....||++...+..+++|.-... ...++...|..+|+.+.. |..++-.-.+..+...++||+
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~---------~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~v~e~ 79 (254)
T cd05083 11 GEIIGEGEFGAVLQGEYTGQKVAVKNIKCD---------VTAQAFLEETAVMTKLHH--KNLVRLLGVILHNGLYIVMEL 79 (254)
T ss_pred eeeeccCCCCceEecccCCCceEEEeecCc---------chHHHHHHHHHHHHhCCC--CCcCeEEEEEcCCCcEEEEEC
Confidence 467888888899998765558999975321 233567778888877653 555555444555667899999
Q ss_pred CCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250 117 LEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 l~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
++ ...|.+.+.... .. -.++.++...|+.+|...
T Consensus 80 ~~--~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 120 (254)
T cd05083 80 MS--KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK 120 (254)
T ss_pred CC--CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 97 346766665422 12 246778999999999654
No 86
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=96.47 E-value=0.048 Score=44.18 Aligned_cols=106 Identities=20% Similarity=0.172 Sum_probs=70.8
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~ 112 (165)
.+.+|.|....||++... ++ .+++|+-....-. . .-..++...|.++|+.+. .|. +++++. .+.....+
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~---~~~~~~~~~e~~~l~~l~--h~~-i~~~~~~~~~~~~~~~ 78 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV-K---LKQVEHVLNEKRILQSIR--HPF-LVNLYGSFQDDSNLYL 78 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-h---hhHHHHHHHHHHHHHhCC--CCC-ccceeeEEEcCCeEEE
Confidence 567888999999999876 34 7888875422100 0 112467778888888776 243 444443 46667789
Q ss_pred EEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~ 151 (165)
|||+++ ...|.+.+......+ .++.+|...|..+|..
T Consensus 79 v~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~ 120 (290)
T cd05580 79 VMEYVP--GGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL 120 (290)
T ss_pred EEecCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 999997 346777776554322 3667888888888864
No 87
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=96.45 E-value=0.044 Score=42.86 Aligned_cols=105 Identities=17% Similarity=0.074 Sum_probs=70.1
Q ss_pred eEeccCCceeEEEEEEeCC-----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCC
Q 045250 37 IKEVGDGNLNFVYIVVGTS-----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRT 108 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e 108 (165)
.+.+|.|....||++...+ + .+++|...+... + -.......|.+.|+.+.. |. +++++ +.+..
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-----~-~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~ 74 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-----E-QQIEEFLREARIMRKLDH--PN-IVKLLGVCTEEE 74 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-----h-HHHHHHHHHHHHHHhcCC--Cc-hheEEEEEcCCC
Confidence 3578999999999998864 2 688898753321 1 134567778888887722 43 34444 34456
Q ss_pred CceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
...++||+++ ..++.+.+.... .. ..++.++...|+-+|...
T Consensus 75 ~~~~i~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~ 123 (258)
T smart00219 75 PLMIVMEYME--GGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN 123 (258)
T ss_pred eeEEEEeccC--CCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 8889999998 346666665433 21 357778888888888664
No 88
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=96.45 E-value=0.072 Score=43.14 Aligned_cols=107 Identities=11% Similarity=-0.064 Sum_probs=64.4
Q ss_pred ccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEEe
Q 045250 40 VGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIGMR 115 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~vME 115 (165)
+|.|....||++.+. +| .+.+|...+.... ..-...+...|..+++......-..++.++.+ +.+...+|||
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 77 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK----MKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILD 77 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccc----cchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEe
Confidence 678888999999886 45 7888866532211 01112233344445555443222334554433 4567789999
Q ss_pred cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|++ ..+|.+.+...... ..++.++...|+-+|...
T Consensus 78 ~~~--~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ 117 (279)
T cd05633 78 LMN--GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF 117 (279)
T ss_pred cCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 998 34676666554322 246788888899998654
No 89
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=96.44 E-value=0.043 Score=45.82 Aligned_cols=106 Identities=15% Similarity=0.047 Sum_probs=68.4
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEe
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMR 115 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vME 115 (165)
.||.|....||++.+. +| .++||....-.... .-...+...|.++|+.... |..++-. .+.+.+...+|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~~~~~~~~lv~E 75 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA----KDEVAHTLTESRVLKNTRH--PFLTSLKYSFQTKDRLCFVME 75 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCCC--CCCcceEEEEEcCCEEEEEEe
Confidence 4788999999999876 45 79999865432211 1223466677777766543 4433332 3345667789999
Q ss_pred cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|++ + ..|...+...... ..++.+|...|+-+|...
T Consensus 76 y~~-~-g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ 115 (328)
T cd05593 76 YVN-G-GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK 115 (328)
T ss_pred CCC-C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 998 3 4566666554332 246778888899898754
No 90
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=96.44 E-value=0.042 Score=45.59 Aligned_cols=108 Identities=15% Similarity=0.059 Sum_probs=70.6
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~ 112 (165)
+..||.|....||++... ++ .++||.-..-... ..-...+...|.++++.... +..++.++. .+.+...+
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~l 78 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI----QDDDVECTMVEKRVLALSGK--PPFLTQLHSCFQTMDRLYF 78 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccC--CCeEeeEEEEEecCCEEEE
Confidence 567899999999999876 34 7888876532211 11233456667777765432 345555543 35566779
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||||++ + ..|...+.....+ -.++.+|...|+-+|...
T Consensus 79 v~E~~~-~-g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 121 (323)
T cd05616 79 VMEYVN-G-GDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG 121 (323)
T ss_pred EEcCCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 3 4677766554332 247788889999999753
No 91
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=96.44 E-value=0.045 Score=46.14 Aligned_cols=108 Identities=14% Similarity=0.045 Sum_probs=70.8
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
.++.||.|....||++... +| .++||.-..--... .-...+...|..+|..+.. |. +++++ +.+.+...
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~~--~~-iv~~~~~~~~~~~~~ 77 (360)
T cd05627 5 SLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE----KEQVAHIRAERDILVEADG--AW-VVKMFYSFQDKRNLY 77 (360)
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHhCCC--CC-EeeEEEEEEcCCEEE
Confidence 4678999999999999876 45 78888654321110 1224566778888776542 33 33333 34566779
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
+||||++ +..|.+.+.+.... . .++.+|...|..+|...
T Consensus 78 lv~E~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~g 121 (360)
T cd05627 78 LIMEFLP--GGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG 121 (360)
T ss_pred EEEeCCC--CccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 35777777665433 2 36677888888888654
No 92
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=96.43 E-value=0.06 Score=44.85 Aligned_cols=105 Identities=20% Similarity=0.145 Sum_probs=72.0
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
.+..+|.|....||++.+. +| .+++|.-..... +....+...|.+.|+.+.. |. +.+++ +.+.+...
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~ 79 (331)
T cd06649 9 RISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK------PAIRNQIIRELQVLHECNS--PY-IVGFYGAFYSDGEIS 79 (331)
T ss_pred EEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHHCCC--CC-CCeEEEEEEECCEEE
Confidence 5678999999999999986 45 677787653221 1123567778888877642 33 34444 34667789
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
+||||++ ...|.+.+...... ..++.++...|+-+|..
T Consensus 80 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 122 (331)
T cd06649 80 ICMEHMD--GGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 122 (331)
T ss_pred EEeecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 9999998 45787777664432 25677888888888853
No 93
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=96.41 E-value=0.074 Score=42.14 Aligned_cols=105 Identities=24% Similarity=0.157 Sum_probs=70.1
Q ss_pred eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM 114 (165)
-++.+|.|....||++...++ .+++|.-... ....++...|...|+.+.. |..++-.-.+..+...++|
T Consensus 10 ~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~--------~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~v~ 79 (260)
T cd05067 10 LVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQG--------SMSPEAFLAEANLMKQLQH--PRLVRLYAVVTQEPIYIIT 79 (260)
T ss_pred eeeeeccCccceEEeeecCCCceEEEEEecCC--------CCcHHHHHHHHHHHHhcCC--cCeeeEEEEEccCCcEEEE
Confidence 357899999999999998777 8998864311 1334667778888887753 3333322233456789999
Q ss_pred ecCCCCchHHHHHHHc--CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIA--GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~--g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|++. ...|.+.+.. +... -.++.++...|..+|...
T Consensus 80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ 122 (260)
T cd05067 80 EYME--NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN 122 (260)
T ss_pred EcCC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 9997 3467666654 2221 246678888889888654
No 94
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=96.39 E-value=0.044 Score=45.53 Aligned_cols=106 Identities=14% Similarity=0.070 Sum_probs=68.8
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM 114 (165)
.||.|....||++.+. ++ .+.||.-..-.-.. .-..++...|.+.|+..... |. +++++. .+.+...+||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~h-~~-iv~~~~~~~~~~~~~iv~ 75 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ----DDDVECTMTEKRILSLARNH-PF-LTQLYCCFQTPDRLFFVM 75 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----ccHHHHHHHHHHHHHhccCC-Cc-hhceeeEEEcCCEEEEEE
Confidence 5788989999999876 34 68888755322110 12345666777777665432 33 333433 3556678999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ ...|...+.....+ ..++.+|...|+-+|...
T Consensus 76 Ey~~--~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ 116 (320)
T cd05590 76 EFVN--GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG 116 (320)
T ss_pred cCCC--CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 45777777654432 246678888899888764
No 95
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=96.38 E-value=0.031 Score=46.49 Aligned_cols=107 Identities=17% Similarity=0.149 Sum_probs=70.7
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
-++.||.|....||++.+. +| .++||.-....... .-...+...|.++|+.... |. +++++ +.|.+...
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~~-i~~~~~~~~~~~~~~ 77 (350)
T cd05573 5 VIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK----RNQIAHVRAERDILADADS--PW-IVKLYYSFQDEEHLY 77 (350)
T ss_pred EEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh----ccHHHHHHHHHHHHHhcCC--CC-ccchhhheecCCeEE
Confidence 3577899999999999987 45 79999765332110 1223456667777776652 32 33332 34667788
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~ 151 (165)
+||||++ ...|.+.+.+.... . .++.+|...|+-+|..
T Consensus 78 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 120 (350)
T cd05573 78 LVMEYMP--GGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL 120 (350)
T ss_pred EEEcCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9999997 34777777665332 2 4667888899999974
No 96
>PHA02988 hypothetical protein; Provisional
Probab=96.37 E-value=0.057 Score=44.07 Aligned_cols=107 Identities=13% Similarity=0.075 Sum_probs=72.8
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------CC
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------TM 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------e~ 109 (165)
+...++.|....||+....+..++||.-...-.. -..-.++...|...|+.+.. | ++.+++.+-. ..
T Consensus 24 ~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--~-nIv~~~g~~~~~~~~~~~ 96 (283)
T PHA02988 24 TSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKG----HKVLIDITENEIKNLRRIDS--N-NILKIYGFIIDIVDDLPR 96 (283)
T ss_pred CCeEEeeCCceEEEEEEECCEEEEEEeccccccc----cHHHHHHHHHHHHHHHhcCC--C-CEEEEeeeEEecccCCCc
Confidence 3456788888899999986448999976532211 01113566688888887753 4 5666665422 35
Q ss_pred ceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
..+||||++ ...|++.+.+.... -.++.++...|+.+|..
T Consensus 97 ~~lv~Ey~~--~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 141 (283)
T PHA02988 97 LSLILEYCT--RGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY 141 (283)
T ss_pred eEEEEEeCC--CCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 679999998 45788887665432 35777889999999964
No 97
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=96.37 E-value=0.046 Score=43.95 Aligned_cols=106 Identities=18% Similarity=0.060 Sum_probs=68.8
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~ 111 (165)
.+..+|.|....||++.+. ++ .+++|.-.. ..+.-...+...|..+|+... ...+++++.+ +.....
T Consensus 8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~------~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~ 78 (277)
T cd06640 8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL------EEAEDEIEDIQQEITVLSQCD---SPYVTKYYGSYLKGTKLW 78 (277)
T ss_pred hhhhcccCCCeEEEEEEEccCCEEEEEEEEec------cccHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEECCEEE
Confidence 4567899999999999875 34 788886431 111122356666777776553 2344444443 556789
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
+|||+++ ...|++.+..+.... .++.++...|+.+|...
T Consensus 79 lv~e~~~--~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06640 79 IIMEYLG--GGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEK 121 (277)
T ss_pred EEEecCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 356777777665432 45667777788888654
No 98
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=96.36 E-value=0.062 Score=44.80 Aligned_cols=108 Identities=13% Similarity=0.035 Sum_probs=72.2
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
-.+.||.|....||++... +| .++||.....-... .-..++...|..+|+.+.. |. +++++ +.+.+...
T Consensus 22 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~ 94 (329)
T PTZ00263 22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILK----MKQVQHVAQEKSILMELSH--PF-IVNMMCSFQDENRVY 94 (329)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHhCCC--CC-CCcEEEEEEcCCEEE
Confidence 4678999999999999886 44 79999865321100 1123567778888887642 33 33333 45777889
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
+|||+++ ...|.+.+.+.... . .++.+|...|+-+|...
T Consensus 95 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 138 (329)
T PTZ00263 95 FLLEFVV--GGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKD 138 (329)
T ss_pred EEEcCCC--CChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 34677777665433 2 34567888888888754
No 99
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=96.36 E-value=0.037 Score=46.12 Aligned_cols=106 Identities=10% Similarity=0.009 Sum_probs=68.7
Q ss_pred eccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM 114 (165)
.||.|...-||++.+.. + .+.||......... .-...+...|..+++..... | .++.++. .+.....+||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~~~~~~~~-~-~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD----DEDIDWVQTEKHVFEQASSN-P-FLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhhcCC-C-CEeeEEEEEEeCCEEEEEE
Confidence 57889999999998864 3 68888865432111 11234566777777666442 3 3444443 2556677999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ +..|...+...... ..++.+|...|+-+|...
T Consensus 76 e~~~--~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ 116 (327)
T cd05617 76 EYVN--GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERG 116 (327)
T ss_pred eCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34676666554332 247788888999999764
No 100
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=96.35 E-value=0.053 Score=44.97 Aligned_cols=106 Identities=16% Similarity=0.071 Sum_probs=67.6
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM 114 (165)
.||.|....||++.+. +| .++||.-..-.... .-.......|.++|+..... |. +++++. .+.....+||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~~-~~-i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI----DDDVECTMVEKRVLALAWEN-PF-LTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----cchHHHHHHHHHHHHhccCC-CC-ccCeeEEEEeCCEEEEEE
Confidence 5788888999999886 45 78888765433211 11334566777777654332 33 344432 3556677999
Q ss_pred ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
|+++ +..|...+..+... . .++.+|...|+-+|...
T Consensus 76 E~~~--~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 116 (316)
T cd05620 76 EFLN--GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKG 116 (316)
T ss_pred CCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34676666654332 2 35678888899999654
No 101
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=96.32 E-value=0.1 Score=41.42 Aligned_cols=104 Identities=17% Similarity=0.100 Sum_probs=70.7
Q ss_pred eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~ 112 (165)
-.+.+|.|....||.+...++ .+.||+.... ..+.++...|...|+.+.. | .+++++.+ +.+...+
T Consensus 8 ~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~--------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG--------SMSEDEFIEEAKVMMKLSH--E-KLVQLYGVCTKQRPIYI 76 (256)
T ss_pred EeeEecCcccceEEEEEecCCCcEEEEEcCCC--------cccHHHHHHHHHHHhcCCC--C-CeeeEEEEEccCCCcEE
Confidence 456789999999999987655 6888985421 1234567778888877652 4 44455533 3445689
Q ss_pred EEecCCCCchHHHHHHHcCC-C-C----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGI-K-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~-~-~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...|++.+.... . . -.++.+|...|+-+|...
T Consensus 77 v~e~~~--~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 120 (256)
T cd05113 77 VTEYMS--NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ 120 (256)
T ss_pred EEEcCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 347777776532 2 2 257888999999998654
No 102
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=96.32 E-value=0.052 Score=45.06 Aligned_cols=106 Identities=13% Similarity=0.037 Sum_probs=68.3
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEe
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMR 115 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vME 115 (165)
.||.|....||++.+. +| .++||.-..-.... .-...+...|.++|+.+.. |..+.-. .+.+.+...+|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h--p~i~~~~~~~~~~~~~~lv~e 75 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA----KDEVAHTLTESRVLQNTRH--PFLTALKYSFQTHDRLCFVME 75 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hHHHHHHHHHHHHHHhCCC--CCCCCEEEEEEcCCEEEEEEe
Confidence 4788999999999875 45 78999755322110 1123456677778876542 4433332 3345566779999
Q ss_pred cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|++ ...|.+.+..+..+ ..++.+|...|+-+|...
T Consensus 76 ~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 115 (323)
T cd05571 76 YAN--GGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD 115 (323)
T ss_pred CCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 998 34666766665433 235678888899898764
No 103
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=96.29 E-value=0.063 Score=44.23 Aligned_cols=105 Identities=17% Similarity=0.166 Sum_probs=68.0
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC-----
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR----- 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~----- 107 (165)
.+.+|.|....||++.+. +| .++||.-...... .....+...|.++|+.+.. |..+ +++.+ +.
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--pniv-~~~~~~~~~~~~~~ 76 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH-----VSDATRILREIKLLRLLRH--PDIV-EIKHIMLPPSRREF 76 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc-----chhHHHHHHHHHHHHhCCC--CCEe-eecceEeccCCCCC
Confidence 467899999999999875 45 8999975432211 1223567788888887642 3322 23222 11
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
....+|||+++. .|.+.+.++..+ ..++.+|...|+-+|...
T Consensus 77 ~~~~lv~e~~~~---~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 123 (338)
T cd07859 77 KDIYVVFELMES---DLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTAN 123 (338)
T ss_pred ceEEEEEecCCC---CHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 235899999972 566666654332 247788899999999765
No 104
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=96.28 E-value=0.081 Score=41.65 Aligned_cols=105 Identities=16% Similarity=0.104 Sum_probs=70.3
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
.+.+|.|....||++... ++ .+++|.-.. ..+.........|.++|+.+.. | .+++++ ..+.+...+
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~------~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~i 76 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDL------EKCQTSVDELRKEVQAMSQCNH--P-NVVKYYTSFVVGDELWL 76 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEecc------CCcchHHHHHHHHHHHHHhcCC--C-CEEEEEEEEeeCCEEEE
Confidence 566888999999999865 44 788886431 2222355677888888877643 2 333333 456778889
Q ss_pred EEecCCCCchHHHHHHHcC----CCC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAG----IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g----~~~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...+.+.+.++ ... ..++.+|...|+-+|...
T Consensus 77 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~ 122 (267)
T cd06610 77 VMPYLS--GGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG 122 (267)
T ss_pred EEeccC--CCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 34666666542 122 246788889999998654
No 105
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=96.28 E-value=0.1 Score=40.84 Aligned_cols=104 Identities=18% Similarity=0.014 Sum_probs=65.2
Q ss_pred eccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 045250 39 EVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMRY 116 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vMEd 116 (165)
.+|.|....||++...++ .+++|.-..-.. .-...+...|.+.|+.+.. |..++-. +..+.....+|||+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~ 73 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP------QELKIKFLSEARILKQYDH--PNIVKLIGVCTQRQPIYIVMEL 73 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCC------HHHHHHHHHHHHHHHhCCC--CCcCeEEEEEecCCccEEEEEC
Confidence 478888889999987766 788886432110 0112345667777776632 4433322 44566778899999
Q ss_pred CCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 117 LEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 l~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
++ ...+.+.+.... .. -.++.++...|..+|...
T Consensus 74 ~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 113 (250)
T cd05085 74 VP--GGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN 113 (250)
T ss_pred CC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 98 346666665432 22 256677888888888654
No 106
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=96.28 E-value=0.083 Score=41.86 Aligned_cols=104 Identities=17% Similarity=0.133 Sum_probs=68.5
Q ss_pred eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
-.+.+|.|....||++...++ .++||.-.+. + ........|.+.|+.+.. |. +++++ ..+.....+
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~------~--~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~l 78 (261)
T cd05068 10 LLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPG------T--MDPKDFLAEAQIMKKLRH--PK-LIQLYAVCTLEEPIYI 78 (261)
T ss_pred eEEEecccCCccEEEEEecCCeEEEEEeeCCC------c--ccHHHHHHHHHHHHHCCC--CC-ccceeEEEecCCCeee
Confidence 357889888889999987655 7888875421 1 123445667778877652 33 33344 334455679
Q ss_pred EEecCCCCchHHHHHHHcCC--C-----CHHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGI--K-----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~--~-----~~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ..+|.+.+.... . ...++.++...|+.+|...
T Consensus 79 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 123 (261)
T cd05068 79 VTELMK--YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN 123 (261)
T ss_pred eeeccc--CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999996 357777775432 1 1367788888899888653
No 107
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=96.26 E-value=0.11 Score=41.66 Aligned_cols=105 Identities=16% Similarity=0.092 Sum_probs=68.5
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
++.+|.|....||++... +| .++||.-..... ..-...+...|...|+.+.. |. +++++ +.+.....+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~~ 76 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-----EEGVPSTAIREISLLKELQH--PN-IVCLQDVLMQESRLYL 76 (285)
T ss_pred eeEecccCceEEEEEEECCCCcEEEEEEeccccc-----cCCchHHHHHHHHHHHhcCC--CC-EeeeEEEEeeCCeEEE
Confidence 567899999999999875 45 788886542211 11222456678888887752 33 33444 347788899
Q ss_pred EEecCCCCchHHHHHHHc----CCCCH----HHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIA----GIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~----g~~~~----~~a~~iG~~La~~h~~t 152 (165)
|||+++ . .+.+.+.. +.... .++.+|...|+-+|...
T Consensus 77 v~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 121 (285)
T cd07861 77 IFEFLS-M--DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR 121 (285)
T ss_pred EEecCC-C--CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 2 45555433 22222 36888999999999753
No 108
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=96.26 E-value=0.041 Score=44.39 Aligned_cols=109 Identities=17% Similarity=0.150 Sum_probs=69.5
Q ss_pred eEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CCCc
Q 045250 37 IKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-RTMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~e~~ 110 (165)
.+.+|.|....||++... ++ .+.||.-....- .......++...|..+|+.+... |..++-...+. ....
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~---~~~~~~~~~~~~E~~~l~~~~~~-~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI---VQKAKTAEHTRTERQVLEAVRRC-PFLVTLHYAFQTDTKL 80 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH---HhhhhHHHHHHHHHHHHHhccCC-cchhhhheeeecCCEE
Confidence 467899999999998753 34 688887542211 11233446777888888877543 44444333333 3445
Q ss_pred eEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~ 151 (165)
.+|||+++ + ..|.+.+..+..+ . .++.++...|+.+|..
T Consensus 81 ~lv~e~~~-~-~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~ 124 (288)
T cd05583 81 HLILDYVN-G-GELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL 124 (288)
T ss_pred EEEEecCC-C-CcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 59999998 3 4677777654432 2 3566888889988864
No 109
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=96.26 E-value=0.061 Score=44.41 Aligned_cols=105 Identities=15% Similarity=0.123 Sum_probs=67.1
Q ss_pred EeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCc
Q 045250 38 KEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMS 110 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~ 110 (165)
+.+|.|....||+|... +| .+++|.-....-. .....+...|.++|+.+.. |..+ +++. .+....
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~niv-~~~~~~~~~~~~ 73 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-----VRDRVRTKMERDILAEVNH--PFIV-KLHYAFQTEGKL 73 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHhCCC--CCcc-cEEEEEEcCCEE
Confidence 56888989999998763 34 6888865422110 1223466678888876642 4333 3433 355667
Q ss_pred eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+||||++ + ..|.+.+.+.... -.++.+|...|+-+|...
T Consensus 74 ~lv~e~~~-~-~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 118 (318)
T cd05582 74 YLILDFLR-G-GDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG 118 (318)
T ss_pred EEEEcCCC-C-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 79999998 3 4666666554432 246788899999999764
No 110
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=96.25 E-value=0.077 Score=43.59 Aligned_cols=105 Identities=18% Similarity=0.091 Sum_probs=70.0
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
.++.+|.|....||++... +| .+++|....... .-...+...|.++|+.+.. |..++-. .+.+.+...+
T Consensus 5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~l 76 (308)
T cd06615 5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK------PAIRNQIIRELKVLHECNS--PYIVGFYGAFYSDGEISI 76 (308)
T ss_pred EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC------HHHHHHHHHHHHHHHhCCC--CCCCeEEEEEeeCCEEEE
Confidence 3567899999999999876 45 677776543221 0123456778888887743 4333222 4457788899
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~ 150 (165)
+|||++ ...|.+.+...... ..++.+|...|+-+|.
T Consensus 77 v~ey~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~ 117 (308)
T cd06615 77 CMEHMD--GGSLDQVLKKAGRIPENILGKISIAVLRGLTYLRE 117 (308)
T ss_pred EeeccC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999998 34777776553322 2577888889999995
No 111
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=96.25 E-value=0.011 Score=55.16 Aligned_cols=105 Identities=18% Similarity=0.139 Sum_probs=72.8
Q ss_pred cc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-----
Q 045250 34 DL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF----- 105 (165)
Q Consensus 34 ~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----- 105 (165)
.| .-+.+|-|-.--|||..+. .| .|-||++.+.. ...+.+|...|.++|+.+. + |.. -+.+..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~------~~r~~e~~~~EieilkKLn-h-~NI-Vk~f~iee~~~ 84 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES------SLRPRERWCREIEILKKLN-H-PNI-VKLFDIEETKF 84 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc------ccchHHHHHHHHHHHHHcC-c-hhh-hhhcccCCccc
Confidence 44 5566776655569999854 67 89999999876 3478899999999999987 2 221 111111
Q ss_pred ---cCCCceEEEecCCCCchHHHHHHHcCCC--------CHHHHHHHHHHHHHHH
Q 045250 106 ---DRTMSLIGMRYLEPPHIILRKGLIAGIK--------YPLLAEHMSEFMAKTL 149 (165)
Q Consensus 106 ---D~e~~~~vMEdl~~~~~~lr~~l~~g~~--------~~~~a~~iG~~La~~h 149 (165)
-...-++||||++ +..|+..|.+.+. +-.+-.+++..|--+|
T Consensus 85 ~~~~~~~~vlvmEyC~--gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr 137 (732)
T KOG4250|consen 85 LGLVTRLPVLVMEYCS--GGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR 137 (732)
T ss_pred cCcccccceEEEeecC--CCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 2345689999999 5699999998763 2234555666665555
No 112
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=96.23 E-value=0.099 Score=40.49 Aligned_cols=106 Identities=18% Similarity=0.035 Sum_probs=72.0
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC--CCce
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDR--TMSL 111 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~--e~~~ 111 (165)
.+.++.|...-||++.+. ++ .+++|....... ++-..++...|.+.++.+. .|..++-. ...+. ....
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~~ 77 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-----SEEELEALEREIRILSSLQ--HPNIVRYYGSERDEEKNTLN 77 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeecccc-----chHHHHHHHHHHHHHHHcC--CCCEeeEEEEEecCCCCeEE
Confidence 466788888899999887 45 899998753321 1334567778888888776 24444433 22333 4678
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
++||+.+ ..+|.+.+.+...+ -.++.++...|+-+|..
T Consensus 78 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (260)
T cd06606 78 IFLEYVS--GGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN 120 (260)
T ss_pred EEEEecC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9999997 45788877765422 25777888888888874
No 113
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=96.22 E-value=0.07 Score=45.13 Aligned_cols=109 Identities=15% Similarity=0.030 Sum_probs=69.1
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~ 112 (165)
.++.||.|....||++... +| .+.||.-....... .-...+...|.++|+.+.. |..++-... .|.....+
T Consensus 5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~il~~~~~--~~iv~~~~~~~~~~~~~l 78 (363)
T cd05628 5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE----KEQVGHIRAERDILVEADS--LWVVKMFYSFQDKLNLYL 78 (363)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH----hhHHHHHHHHHHHHHhCCC--CCcceEEEEEecCCeEEE
Confidence 4678999999999999876 45 78888754321110 1123466678788776642 333333322 34556779
Q ss_pred EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
||||++ ...|.+.+.+.... . .++.+|...|.-+|...
T Consensus 79 v~E~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~g 121 (363)
T cd05628 79 IMEFLP--GGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLG 121 (363)
T ss_pred EEcCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 34777777654432 2 35667778888888653
No 114
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=96.21 E-value=0.066 Score=44.38 Aligned_cols=106 Identities=15% Similarity=0.057 Sum_probs=67.9
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~vM 114 (165)
.||.|....||++... ++ .++||.-..-... -.-..++...|.+.|...... | ++++++.+ +.+...+||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~h-p-~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL----EDDDVECTMVERRVLALAWEH-P-FLTHLFCTFQTKEHLFFVM 75 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhhHHHHHHHHHHHHhccCC-C-CccceeeEEEcCCEEEEEE
Confidence 5788999999999876 34 7888976533211 112344556677776654332 3 34444433 556778999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ +..|...+.....+ ..++.+|...|+-+|...
T Consensus 76 e~~~--gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 116 (316)
T cd05592 76 EYLN--GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG 116 (316)
T ss_pred cCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34676666554332 236778888888898754
No 115
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=96.21 E-value=0.14 Score=40.43 Aligned_cols=103 Identities=20% Similarity=0.188 Sum_probs=69.9
Q ss_pred eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~v 113 (165)
.+.+|.|....||++.+.++ .++||.-.+- ..+..+...|..+|+.+.. | .+++++.+ +.....++
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~--------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~~v 79 (261)
T cd05034 11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG--------TMSPEAFLQEAQIMKKLRH--D-KLVQLYAVCSEEEPIYIV 79 (261)
T ss_pred eeeeccCcceEEEEEEEcCCceEEEEEecCC--------ccCHHHHHHHHHHHhhCCC--C-CEeeeeeeeecCCceEEE
Confidence 46788888899999987655 7888874421 1344677778888877652 3 44445443 33678899
Q ss_pred EecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ..+|.+.+.+.. .. ..++.++...|+-+|...
T Consensus 80 ~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~ 123 (261)
T cd05034 80 TEYMS--KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN 123 (261)
T ss_pred EeccC--CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99997 457877776532 11 356778888888888654
No 116
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.20 E-value=0.12 Score=42.13 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=72.9
Q ss_pred Ccc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 045250 33 DDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRT 108 (165)
Q Consensus 33 ~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e 108 (165)
..+ .++.+|.|..+.||++.+. ++ .+.+|.-.. ..+ -..++...|.++|+.... |..++-. ++.+..
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~------~~~-~~~~~~~~e~~~l~~~~h--~~v~~~~~~~~~~~ 90 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL------QQQ-PKKELIINEILVMRENKN--PNIVNYLDSYLVGD 90 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEec------CCc-chHHHHHHHHHHHHhCCC--CCEeeEEEEEEeCC
Confidence 344 5667999999999999865 44 788886431 111 234677788888877533 4444433 345677
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
...+|||+++ ...|.+.+.++... ..++.++...|+-+|...
T Consensus 91 ~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~g 136 (296)
T cd06654 91 ELWVVMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136 (296)
T ss_pred EEEEeecccC--CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 8899999998 34676666554322 356678888899998765
No 117
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=96.19 E-value=0.082 Score=42.10 Aligned_cols=105 Identities=16% Similarity=0.066 Sum_probs=68.9
Q ss_pred eEeccCCceeEEEEEEeC-----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc----
Q 045250 37 IKEVGDGNLNFVYIVVGT-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD---- 106 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D---- 106 (165)
++.+|.|..+.||++... .+ .++||...+... .....+...|.+.|+.+. -..+++++.+.
T Consensus 9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~------~~~~~~~~~ei~~l~~l~---~~~i~~~~~~~~~~~ 79 (284)
T cd05038 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE------EQHRSDFEREIEILRTLD---HENIVKYKGVCEKPG 79 (284)
T ss_pred heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc------hHHHHHHHHHHHHHHhCC---CCChheEEeeeecCC
Confidence 467899999999999753 24 788998653321 112345566666666553 23455665543
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++ ..+|++.+.... .. ..++.+|...|+.+|...
T Consensus 80 ~~~~~lv~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 129 (284)
T cd05038 80 GRSLRLIMEYLP--SGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR 129 (284)
T ss_pred CCceEEEEecCC--CCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence 336789999997 457777776533 21 357888889999999654
No 118
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=96.17 E-value=0.091 Score=41.60 Aligned_cols=104 Identities=18% Similarity=0.132 Sum_probs=69.4
Q ss_pred eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~ 112 (165)
-.+.+|.|....||++....+ .+++|.-.+. ....++...|.+.|+.+.. | .+++++. .+.....+
T Consensus 8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~--------~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~l 76 (256)
T cd05059 8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREG--------AMSEDDFIEEAKVMMKLSH--P-NLVQLYGVCTKQRPIFI 76 (256)
T ss_pred hhhhhccCCCceEEEeEecCCccEEEEEeccC--------CCCHHHHHHHHHHHHhCCC--C-CEEEEEEEEcCCCceEE
Confidence 346688899899999987655 7888864321 1234566678888877642 3 4555553 34455679
Q ss_pred EEecCCCCchHHHHHHHcCC-C-C----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGI-K-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~-~-~----~~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...|.+.+.... . . -.++.+|...|+-+|...
T Consensus 77 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 120 (256)
T cd05059 77 VTEYMA--NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG 120 (256)
T ss_pred EEecCC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 346777775432 1 1 257788899999998755
No 119
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=96.16 E-value=0.048 Score=43.70 Aligned_cols=103 Identities=19% Similarity=0.127 Sum_probs=68.0
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
++.+|.|...-||++.+. ++ .+++|+..... .-..++...|.++|+.+. .| .+++++ +.+.....+
T Consensus 10 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-------~~~~~~~~~e~~~l~~l~--h~-~i~~~~~~~~~~~~~~l 79 (280)
T cd06611 10 IGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-------EEELEDFMVEIDILSECK--HP-NIVGLYEAYFYENKLWI 79 (280)
T ss_pred HHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-------HHHHHHHHHHHHHHHhCC--CC-ceeEEEEEEecCCeEEE
Confidence 456889999999999875 45 78888764211 112345667888887776 23 344444 346677789
Q ss_pred EEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhc
Q 045250 113 GMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~ 151 (165)
|||+++ +..|...+.+. ..+ -.++.++...|+-+|..
T Consensus 80 v~e~~~--~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 122 (280)
T cd06611 80 LIEFCD--GGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH 122 (280)
T ss_pred EeeccC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 999998 45666666542 221 24677788888888854
No 120
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=96.16 E-value=0.088 Score=41.71 Aligned_cols=108 Identities=11% Similarity=0.018 Sum_probs=67.9
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
.+.+|.|....||++... +| .++||.-..+... -.-...+...|.+.|+.+.. |..++-+ ++.+.....++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM----DAKARQDCVKEIDLLKQLNH--PNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC----CHHHHHHHHHHHHHHHhCCC--cceeeeeeeEEECCeEEEE
Confidence 456899999999999875 44 8999975432211 01122345668888877743 3322222 34466778899
Q ss_pred EecCCCCchHHHHHHHc----CCC-C----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIA----GIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~----g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ..+|+..+.. +.. . -.++.+|...|+-+|...
T Consensus 81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 126 (267)
T cd08228 81 LELAD--AGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR 126 (267)
T ss_pred EEecC--CCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 99998 3366555532 121 2 256788999999999654
No 121
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=96.15 E-value=0.058 Score=47.72 Aligned_cols=117 Identities=19% Similarity=0.172 Sum_probs=74.6
Q ss_pred cceeEeccC--CceeEEEEEEeC------C-C---eEEEEecCc--ccc---ccC--CCCCCChHH------------HH
Q 045250 34 DLTIKEVGD--GNLNFVYIVVGT------S-G---SFVIKQALP--YVR---CIG--ESWPMTKER------------AY 82 (165)
Q Consensus 34 ~~~v~~l~~--Gn~N~v~rV~~~------~-g---svIvKqa~p--~~r---~~~--~~~~l~~~R------------~~ 82 (165)
+.+++.||+ |.+..|.+|+-. + . +||||-+-. ..+ ... ..-.++.+. -.
T Consensus 35 ~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~l~~~HN 114 (414)
T PF07914_consen 35 NKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLALRALSENMKFEGGKGFDEEKEWEEFEKFLREMHN 114 (414)
T ss_pred CcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEeccHhhHHHHHHhhccccccccchhhHHHHHHHHHHHhhH
Confidence 457777775 778999999843 1 1 899998852 222 211 011122222 23
Q ss_pred HHHHHHHHhhccC--CCCCceEEE---EcCCC---ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250 83 FEALALKEHGKLC--PDHVPEVYH---FDRTM---SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 83 ~E~~~L~~~~~~~--p~~vP~v~~---~D~e~---~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd 154 (165)
.|..+++.+.+.- +-.+|++|+ ||.++ ..++|||++ +.... . +..| ..+.--.+|.+.||++|..+-.
T Consensus 115 rEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ve-n~~~~-~-~~e~-~~~eql~~iv~aLA~~~A~sl~ 190 (414)
T PF07914_consen 115 REVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVE-NVHSM-D-MYEN-LSVEQLLQIVRALAKFHALSLK 190 (414)
T ss_pred HHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccC-Cceee-c-ccCC-CCHHHHHHHHHHHHHHHHhHcc
Confidence 4556777777763 457999999 77776 789999999 44322 2 1122 3356678889999999998744
No 122
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=96.13 E-value=0.087 Score=41.34 Aligned_cols=103 Identities=18% Similarity=0.088 Sum_probs=66.4
Q ss_pred eccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceEEEe
Q 045250 39 EVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSLIGMR 115 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~~vME 115 (165)
.+|.|....||++.+.++ .+++|...... ..-...+...|.++++.+.. | .++++ +..+.....++||
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~------~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~~v~e 72 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTL------PPDLKRKFLQEAEILKQYDH--P-NIVKLIGVCVQKQPIYIVME 72 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccC------CHHHHHHHHHHHHHHHhCCC--C-CeEEEEEEEecCCCeEEEEE
Confidence 577788888999998756 89999654321 11123456677777776642 3 33343 3456677889999
Q ss_pred cCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 116 YLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
+++ ...|.+.+.... .. -.++.++...|+.+|...
T Consensus 73 ~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~ 113 (251)
T cd05041 73 LVP--GGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN 113 (251)
T ss_pred cCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 997 346777664422 22 246667788888888554
No 123
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=96.13 E-value=0.16 Score=41.25 Aligned_cols=105 Identities=12% Similarity=0.078 Sum_probs=70.4
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~ 111 (165)
.++.+|.|....||++... ++ .+++|+-..... .-...+...|.++|+.+.. | ++.+++. .+.....
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~ 79 (288)
T cd07871 9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE------EGAPCTAIREVSLLKNLKH--A-NIVTLHDIIHTERCLT 79 (288)
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc------CCcchhHHHHHHHHHhCCC--C-CEeeEEEEEcCCCeEE
Confidence 4788999999999999876 44 788897642211 1123466778888877743 3 3445543 3556678
Q ss_pred EEEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||+++ . .|.+.+.. +... ..++.+|...|+-+|...
T Consensus 80 lv~e~~~-~--~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 123 (288)
T cd07871 80 LVFEYLD-S--DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK 123 (288)
T ss_pred EEEeCCC-c--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 2 56666654 2222 246788999999999754
No 124
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=96.13 E-value=0.069 Score=44.24 Aligned_cols=106 Identities=13% Similarity=0.040 Sum_probs=69.2
Q ss_pred eccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM 114 (165)
.+|.|....||++.... + .+.||.-..-.-.. . -..++...|.++|+..... .++++++. .+.+...+||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~---~~~~~~~~e~~il~~~~~h--~~i~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-D---DDVECTMTEKRVLALAGKH--PFLTQLHSCFQTKDRLFFVM 75 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-h---hHHHHHHHHHHHHHhccCC--CCccceeeEEEcCCEEEEEE
Confidence 47888889999998763 4 78888754322111 1 2235666788888766532 34555554 4677789999
Q ss_pred ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
||++ +..|...+.++..+ . .++.+|...|+-+|...
T Consensus 76 e~~~--~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ 116 (318)
T cd05570 76 EYVN--GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG 116 (318)
T ss_pred cCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9998 34676666655332 2 35677888888888643
No 125
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=96.12 E-value=0.12 Score=41.11 Aligned_cols=109 Identities=16% Similarity=0.047 Sum_probs=69.1
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC--Cc
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT--MS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e--~~ 110 (165)
.+.++.|....||++.+. +| .++||+....... .+..-...+...|..+|+.+.. |. +++++.+ +.+ ..
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPES--PETSKEVNALECEIQLLKNLLH--ER-IVQYYGCLRDPMERTL 81 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCC--cccHHHHHHHHHHHHHHHhcCC--CC-eeeEEeEeccCCCceE
Confidence 567888888899999875 45 8999976432211 1111223466678888877742 33 3344443 322 24
Q ss_pred eEEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
.++||+++ ...|++.+.+... . -.++.++...|+.+|...
T Consensus 82 ~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (265)
T cd06652 82 SIFMEHMP--GGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM 126 (265)
T ss_pred EEEEEecC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 47999998 4578877765332 2 357888999999999765
No 126
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=96.12 E-value=0.1 Score=41.98 Aligned_cols=107 Identities=15% Similarity=0.022 Sum_probs=69.1
Q ss_pred eeEeccCCceeEEEEEEeC-----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-c--
Q 045250 36 TIKEVGDGNLNFVYIVVGT-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-D-- 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D-- 106 (165)
.++.+|.|....||++... .+ .+++|+..+... . -..++...|.++|+.+.. |..++-.-.+ +
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~---~---~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~ 79 (284)
T cd05079 8 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---G---NHIADLKKEIEILRNLYH--ENIVKYKGICTEDG 79 (284)
T ss_pred hceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc---H---HHHHHHHHHHHHHHhCCC--CCeeeeeeEEecCC
Confidence 5678999999999998732 34 799998654322 1 123567778888877643 4443332222 2
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
.....+||||++ +..|.+.+.+.. .. -.++.+|...|+-+|...
T Consensus 80 ~~~~~lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g 129 (284)
T cd05079 80 GNGIKLIMEFLP--SGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ 129 (284)
T ss_pred CCceEEEEEccC--CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 244679999997 347777765432 11 257778888898888654
No 127
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=96.11 E-value=0.067 Score=44.14 Aligned_cols=105 Identities=12% Similarity=0.101 Sum_probs=68.7
Q ss_pred ccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 045250 40 VGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMRY 116 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vMEd 116 (165)
||.|....||++.+. ++ .+.+|.-...... -.-...+...|.++|+.+. .|..++-. .+.+.+...+||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~ 74 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV----SRSEVTHTLAERTVLAQVN--CPFIVPLKFSFQSPEKLYLVLAF 74 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhCC--CCcEeceeeEEecCCeEEEEEcC
Confidence 577888899999886 34 7888875422111 0123456777888887764 25555533 23466778899999
Q ss_pred CCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 117 LEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 l~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
++ ...|.+.+.....+ ..++.+|...|.-+|...
T Consensus 75 ~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 113 (312)
T cd05585 75 IN--GGELFHHLQREGRFDLSRARFYTAELLCALENLHKFN 113 (312)
T ss_pred CC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 98 35677777554332 246678888898898754
No 128
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=96.07 E-value=0.2 Score=39.87 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=66.5
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC--CCc
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDR--TMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~--e~~ 110 (165)
+..+|.|..+.||++.+. ++ .+++|+....... ....+...|...|+.+... |. +++++ +.|. +..
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~------~~~~~~~~e~~~l~~l~~h-~~-i~~~~~~~~~~~~~~~ 75 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS------LEQVNNLREIQALRRLSPH-PN-ILRLIEVLFDRKTGRL 75 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCC------chhhhHHHHHHHHhhcCCC-CC-ccceEEEEecCCCCcE
Confidence 567899999999999875 44 7889976543221 1122344577777666443 33 23333 3455 678
Q ss_pred eEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
.+|||+++ . .+.+.+.+.. .. -.++.+|...|..+|...
T Consensus 76 ~lv~e~~~--~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 120 (282)
T cd07831 76 ALVFELMD--M-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG 120 (282)
T ss_pred EEEEecCC--c-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999997 3 4556665432 22 246778888888888764
No 129
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=96.04 E-value=0.12 Score=40.09 Aligned_cols=107 Identities=19% Similarity=0.146 Sum_probs=72.3
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
++.++.|...-||++.+. ++ .+++|.-.... ...-...+...|.++++.+. .|..++-. .+.+.+...++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~e~~~l~~l~--~~~~~~~~~~~~~~~~~~lv 77 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSN-----MSEKEREDALNEVKILKKLN--HPNIIKYYESFEEKGKLCIV 77 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCCcEEEEEEeeccc-----CChHHHHHHHHHHHHHHhcC--CCChhheEEEEecCCEEEEE
Confidence 467888888899999987 34 78888754221 11234456777888888776 34433322 45566888899
Q ss_pred EecCCCCchHHHHHHHcC----CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAG----IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g----~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ..+|++.+.+. ..+ ..++.++...|+.+|...
T Consensus 78 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 123 (258)
T cd08215 78 MEYAD--GGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK 123 (258)
T ss_pred EEecC--CCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99998 45777777652 221 357888889999999753
No 130
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=96.03 E-value=0.097 Score=41.07 Aligned_cols=102 Identities=14% Similarity=0.011 Sum_probs=62.9
Q ss_pred eccCCceeEEEEEEeCCCe------------EEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc
Q 045250 39 EVGDGNLNFVYIVVGTSGS------------FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD 106 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~gs------------vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D 106 (165)
.+|.|..+.||++...+.+ +++|. .+.. ... ..+...|+..|+.+.. |..++-+-.+-
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~----~~~~--~~~--~~~~~~e~~~l~~l~h--~~i~~~~~~~~ 71 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKV----LGSD--HRD--SLAFFETASLMSQLSH--KHLVKLYGVCV 71 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeec----cccc--hhh--HHHHHHHHHHHHcCCC--cchhheeeEEe
Confidence 4788888999999886322 33332 2211 111 4566677777776532 44443332222
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t 152 (165)
.....+|||+++ ..+|.+.+.... .. -.++.+|...|+-+|...
T Consensus 72 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 121 (259)
T cd05037 72 RDENIMVEEYVK--FGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK 121 (259)
T ss_pred cCCcEEEEEcCC--CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 267899999998 357887776544 21 246778899999999653
No 131
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=96.03 E-value=0.092 Score=43.85 Aligned_cols=106 Identities=11% Similarity=0.009 Sum_probs=68.0
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~vM 114 (165)
.||.|....||++.+. ++ .+.+|......... .-...+...|..+|...... |..+ +++ +.+.....+||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~~~~h-p~iv-~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND----DEDIDWVQTEKHVFEQASNH-PFLV-GLHSCFQTESRLFFVI 75 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc----hhHHHHHHHHHHHHHhcCCC-CcCC-ceeeEEEeCCEEEEEE
Confidence 5788999999999876 34 78888866443211 12344566777777655433 3333 333 34567788999
Q ss_pred ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
||++ ...|...+...... . .++.+|...|.-+|...
T Consensus 76 E~~~--~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ 116 (329)
T cd05618 76 EYVN--GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 116 (329)
T ss_pred eCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34666666554332 2 36677888888888764
No 132
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=96.03 E-value=0.22 Score=40.68 Aligned_cols=106 Identities=16% Similarity=0.050 Sum_probs=69.7
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP-EVYHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~e~~~~ 112 (165)
-++.+|.|...-||++.+. +| .++||.-..... .-...+...|.++|+.+.. |..+. .-++.+.+...+
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE------EGTPFTAIREASLLKGLKH--ANIVLLHDIIHTKETLTL 80 (303)
T ss_pred EeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc------cccchhHHHHHHHHhhCCC--CCcCeEEEEEecCCeEEE
Confidence 4688999999999999986 45 788997542111 1223466778888887743 33222 223456788899
Q ss_pred EEecCCCCchHHHHHHHcC--CCCH----HHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAG--IKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g--~~~~----~~a~~iG~~La~~h~~t 152 (165)
|||+++. .+.+.+... ...+ .++.+|...|+-+|...
T Consensus 81 v~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 123 (303)
T cd07869 81 VFEYVHT---DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY 123 (303)
T ss_pred EEECCCc---CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999973 455555442 2332 46678888888888754
No 133
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=96.02 E-value=0.1 Score=42.55 Aligned_cols=105 Identities=14% Similarity=0.070 Sum_probs=67.2
Q ss_pred eEeccCCceeEEEEEEeCC-----------------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC
Q 045250 37 IKEVGDGNLNFVYIVVGTS-----------------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDH 98 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-----------------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~ 98 (165)
.+.||.|..-.||++...+ + .+.+|+..+-... -...+...|.++|+.+.. | +
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~E~~~l~~l~h--~-n 80 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANK------NARNDFLKEVKILSRLKD--P-N 80 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCH------HHHHHHHHHHHHHhhcCC--C-C
Confidence 4678999999999997532 2 4777776543211 112345567777766532 3 3
Q ss_pred CceEE--EEcCCCceEEEecCCCCchHHHHHHHcCCC------------------------CHHHHHHHHHHHHHHHhcc
Q 045250 99 VPEVY--HFDRTMSLIGMRYLEPPHIILRKGLIAGIK------------------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 99 vP~v~--~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~------------------------~~~~a~~iG~~La~~h~~t 152 (165)
+.+++ +.+.+...+||||++ ...|.+.+..... ...++.+|...|+-+|...
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 158 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYME--NGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN 158 (304)
T ss_pred eeEEEEEEecCCceEEEEecCC--CCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 44444 345677899999997 3467666644221 1258899999999999764
No 134
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=96.00 E-value=0.14 Score=40.48 Aligned_cols=105 Identities=20% Similarity=0.071 Sum_probs=66.3
Q ss_pred eccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM 114 (165)
++|.|....||++... ++ .+.+|....... . +-..+....|...|+.+.. |..++-+-.+..+...+||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~--~---~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~lv~ 74 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN--D---PALKDELLREANVMQQLDN--PYIVRMIGICEAESWMLVM 74 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC--c---HHHHHHHHHHHHHHHhCCC--CCcceEEEEEcCCCcEEEE
Confidence 5788888899998542 34 788887542211 0 1122445667777766532 4444433344667788999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|+++ ...|.+.+...... -.++.++...|.-+|...
T Consensus 75 e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 115 (257)
T cd05116 75 ELAE--LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETN 115 (257)
T ss_pred ecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34777766554332 357788888898888764
No 135
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=96.00 E-value=0.21 Score=40.00 Aligned_cols=108 Identities=15% Similarity=0.014 Sum_probs=68.6
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------C
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------R 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------~ 107 (165)
++.+|.|....||++.+. +| .+++|.-...... . -...+...|.+.++.+..+--..+.+++.+- .
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~--~---~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE--D---GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC--C---CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 567899999999999876 45 7889976543321 1 1122455688888877654333445555331 2
Q ss_pred CCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
....++||+++. .+++.+.... .. -.++.+|...|.-+|...
T Consensus 80 ~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 128 (288)
T cd07863 80 TKVTLVFEHVDQ---DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC 128 (288)
T ss_pred ceEEEEEccccc---CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 335799999982 5666554421 11 246778888888898654
No 136
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=96.00 E-value=0.098 Score=43.61 Aligned_cols=106 Identities=9% Similarity=-0.023 Sum_probs=68.0
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM 114 (165)
.||.|....||++... ++ .+.||.-...... -.-...+...|..+|+..... |. ++.++. .+.....+||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~~e~~il~~~~~h-p~-Iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVN----DDEDIDWVQTEKHVFETASNH-PF-LVGLHSCFQTESRLFFVI 75 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccCC-CC-CCceEEEEEcCCEEEEEE
Confidence 4788888999999876 44 7888875532211 112345566788888766443 33 333333 3566779999
Q ss_pred ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
||++ ...|...+...... . .++.+|...|+-+|...
T Consensus 76 e~~~--~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 116 (329)
T cd05588 76 EFVS--GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG 116 (329)
T ss_pred eCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34666666554332 2 46678888888888754
No 137
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=95.99 E-value=0.046 Score=44.58 Aligned_cols=107 Identities=19% Similarity=0.134 Sum_probs=70.1
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
++.+|.|....||++.+. +| .++||+-...--. -.-..++...|.++|+.+.. |. +.+++ ..|.....+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~l 78 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI----RLKQEQHVHNEKRVLKEVSH--PF-IIRLFWTEHDQRFLYM 78 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh----hhHHHHHHHHHHHHHHhCCC--Cc-HhhhHhhhccCCeEEE
Confidence 577999999999999886 45 7999975421100 00123456678888877643 32 33333 345666789
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||||++ ...|.+.+.+.... -.++.+|...|+-+|...
T Consensus 79 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 121 (291)
T cd05612 79 LMEYVP--GGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE 121 (291)
T ss_pred EEeCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 34677777654432 246778888999999764
No 138
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=95.98 E-value=0.14 Score=41.93 Aligned_cols=107 Identities=20% Similarity=0.151 Sum_probs=70.4
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~ 112 (165)
.+.+|.|....||++...+ + .+++|.-..-.-. . .-...+...|.+.|+.+. .| .+++++.+ +.....+
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~--~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~~~~~~l 78 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMI--K--RNKVKRVLTEQEILATLD--HP-FLPTLYASFQTETYLCL 78 (316)
T ss_pred eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccc--h--HHHHHHHHHHHHHHHhCC--CC-CchhheeeeecCCEEEE
Confidence 4678999999999999864 5 8999976532100 0 013356777888887776 23 34444433 5566789
Q ss_pred EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||++. ..+|.+.+... ..+ -.++.+|...|+-+|...
T Consensus 79 v~e~~~--~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 123 (316)
T cd05574 79 VMDYCP--GGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG 123 (316)
T ss_pred EEEecC--CCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 34777766543 222 135678889999998764
No 139
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=95.97 E-value=0.081 Score=41.72 Aligned_cols=108 Identities=12% Similarity=0.074 Sum_probs=70.0
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCC-ceEEEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHV-PEVYHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v-P~v~~~D~e~~~~v 113 (165)
.+.+|.|....||++... +| .+++|.-..+-... + -...+...|.++|+.+.. |..+ +.-++.+.....++
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~---~~~~~~~~ei~~l~~~~~--~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD-A---KARQDCLKEIDLLKQLDH--PNVIKYLASFIENNELNIV 80 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccc-h---hhHHHHHHHHHHHHhCCC--CCeeeeeeeeecCCeEEEE
Confidence 456889999999999987 55 78888765433221 1 234677888888887743 2221 22234566778899
Q ss_pred EecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ...|...+.. +..+ -.++.+|...|+.+|...
T Consensus 81 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 126 (267)
T cd08224 81 LELAD--AGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR 126 (267)
T ss_pred EecCC--CCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99998 3466666543 1212 245778888888888754
No 140
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=95.97 E-value=0.19 Score=40.37 Aligned_cols=107 Identities=15% Similarity=-0.002 Sum_probs=66.9
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
++.+|.|....||++.+. ++ .++||.-..- .......++...|.++|+.+.. |..++-. .+.+.+...+|
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~-----~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDS-----EENEEVKETTLRELKMLRTLKQ--ENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecc-----cccccchhhHHHHHHHHHhCCC--ccccchhhhEecCCEEEEE
Confidence 567898999999999986 34 6888854321 1223345667778888887754 3332221 23455677899
Q ss_pred EecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t 152 (165)
|||++. ..+......+. .. -.++.+|...|.-+|...
T Consensus 79 ~e~~~~--~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 120 (287)
T cd07848 79 FEYVEK--NMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND 120 (287)
T ss_pred EecCCC--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999983 23333222222 22 247788888888888653
No 141
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=95.97 E-value=0.14 Score=39.95 Aligned_cols=103 Identities=16% Similarity=0.084 Sum_probs=70.3
Q ss_pred eccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 39 EVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
.+|.|....||++.+.. + .+++|........ ....+...|.+.++.+. .|.. ++++ ..+.....
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~e~~~l~~~~--~~~i-~~~~~~~~~~~~~~ 72 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE------EERKDFLKEARVMKKLG--HPNV-VRLLGVCTEEEPLY 72 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccch------hHHHHHHHHHHHHhhcC--CCCh-heeeeeecCCCceE
Confidence 47888888999998863 4 8899987644321 14567778888888876 2433 3333 34567789
Q ss_pred EEEecCCCCchHHHHHHHcC---------CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAG---------IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g---------~~~-----~~~a~~iG~~La~~h~~t 152 (165)
++||+++ ..+|.+.+... ... -.++.++...|+.+|...
T Consensus 73 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 125 (262)
T cd00192 73 LVLEYME--GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK 125 (262)
T ss_pred EEEEecc--CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999997 34777777664 221 257778888888888743
No 142
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=95.94 E-value=0.12 Score=43.15 Aligned_cols=104 Identities=18% Similarity=0.135 Sum_probs=68.7
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~ 111 (165)
.++.+|.|....||++.+. +| .+++|....... ....++...|.+.|+.+.. |. ++++ ++.+.....
T Consensus 9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~ 79 (333)
T cd06650 9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK------PAIRNQIIRELQVLHECNS--PY-IVGFYGAFYSDGEIS 79 (333)
T ss_pred eeccccCCCCEEEEEEEECCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHHCCC--Cc-ccceeEEEEECCEEE
Confidence 4567899999999999886 44 566665443221 1123466778888877742 33 3333 345777889
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~ 150 (165)
+||||++ +..|.+.+...... ..++.++...|+.+|.
T Consensus 80 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~ 121 (333)
T cd06650 80 ICMEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 121 (333)
T ss_pred EEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999997 45787777654322 2456677888888885
No 143
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=95.94 E-value=0.096 Score=42.02 Aligned_cols=107 Identities=17% Similarity=0.028 Sum_probs=70.2
Q ss_pred eeEeccCCceeEEEEEEeC-CC-----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~ 109 (165)
.++.+|.|....||++... +| .+++|.... ...+....+...|+..|+.+. .|..++-.-.+..+.
T Consensus 11 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~------~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~ 82 (279)
T cd05057 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLRE------ETSPKANKEILDEAYVMASVD--HPHVVRLLGICLSSQ 82 (279)
T ss_pred EcceecCCCCccEEEEEEecCCCCcceEEEEEeccC------CCCHHHHHHHHHHHHHHHhCC--CCCcceEEEEEecCc
Confidence 4568999999999999864 23 356665331 111223345666777787663 255555554455588
Q ss_pred ceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
..++||+++ ...|.+.+.+.. .. -.++.+|...|+.+|...
T Consensus 83 ~~~v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 129 (279)
T cd05057 83 VQLITQLMP--LGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR 129 (279)
T ss_pred eEEEEecCC--CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 899999998 347777776532 21 357788999999999754
No 144
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=95.94 E-value=0.023 Score=45.55 Aligned_cols=78 Identities=23% Similarity=0.238 Sum_probs=59.0
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR 115 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME 115 (165)
.+.+++-|.-.+||.+.-..+.+++|..++= .+..=...|+++|+.++. -..+|++|+||.+.-. ||
T Consensus 26 v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~d---------s~r~~l~kEakiLeil~g--~~~~p~vy~yg~~~i~--me 92 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWRGGEVALKVRRRD---------SPRRNLEKEAKILEILAG--EGVTPEVYFYGEDFIR--ME 92 (201)
T ss_pred hhhhhhcccccEEEEeeccCceEEEEEecCC---------cchhhHHHHHHHHHHhhh--cCCCceEEEechhhhh--hh
Confidence 5678899999999999988777888876632 333345789999988776 4679999999988766 99
Q ss_pred cCCCCchHHHHHH
Q 045250 116 YLEPPHIILRKGL 128 (165)
Q Consensus 116 dl~~~~~~lr~~l 128 (165)
|+. +..|.+.-
T Consensus 93 ~i~--G~~L~~~~ 103 (201)
T COG2112 93 YID--GRPLGKLE 103 (201)
T ss_pred hhc--Ccchhhhh
Confidence 997 45554433
No 145
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=95.93 E-value=0.085 Score=41.73 Aligned_cols=109 Identities=11% Similarity=0.028 Sum_probs=69.2
Q ss_pred EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCC-CChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWP-MTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~-l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
+.+|.|-...||++.+. ++ .+++|........ .... -...+...|...|+.+.. |..++-. ++.+.+...+|
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~--~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNT--SSEQEEVVEALRKEIRLMARLNH--PHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCC--chhHHHHHHHHHHHHHHHHHcCC--CceehhhceeccCCeEEEE
Confidence 45788888999999874 44 8999986533211 1111 123466778888877643 3322221 23366777899
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+.+ ...|.+.+.+.... -.++.+|...|+-+|...
T Consensus 82 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~ 123 (268)
T cd06630 82 VEWMA--GGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ 123 (268)
T ss_pred EeccC--CCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99998 45777777654332 246688888888888653
No 146
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=95.92 E-value=0.2 Score=42.04 Aligned_cols=107 Identities=19% Similarity=0.136 Sum_probs=68.4
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------ 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------ 107 (165)
.+..+|.|....||++.+. +| .++||....-. .......+...|.++|+.+.. |..++-.-.+..
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 19 DLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-----QSELFAKRAYRELRLLKHMKH--ENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred EEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-----cchHHHHHHHHHHHHHHhcCC--CCccceeeeecCCccccc
Confidence 6789999999999999865 45 89999763211 112334567788888887753 333322211222
Q ss_pred -CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 108 -TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 -e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
....+|||+++. .+...+..+.... .++.+|...|+.+|...
T Consensus 92 ~~~~~lv~e~~~~---~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~g 138 (343)
T cd07880 92 FHDFYLVMPFMGT---DLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAG 138 (343)
T ss_pred cceEEEEEecCCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 235899999973 4555554444332 46778888888888754
No 147
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=95.92 E-value=0.15 Score=41.59 Aligned_cols=108 Identities=17% Similarity=0.110 Sum_probs=68.1
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~ 111 (165)
.++.+|.|...-||++... .+ .+++|.-....... .-...+...|.++|+.... | .+++++.. +.....
T Consensus 5 ~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~~~~~~ 77 (305)
T cd05609 5 TIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL----RNQIQQVFVERDILTFAEN--P-FVVSMFCSFETKRHLC 77 (305)
T ss_pred EeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh----HHHHHHHHHHHHHHHhCCC--C-CeeeeEEEEecCCEEE
Confidence 3577899999999999876 34 79999654322100 0112355567777776543 3 45555543 333348
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||+++ +..|.+.+...... ..++.++...|+-+|...
T Consensus 78 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (305)
T cd05609 78 MVMEYVE--GGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYG 121 (305)
T ss_pred EEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 35777777554332 234567778888888765
No 148
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=95.91 E-value=0.1 Score=44.51 Aligned_cols=108 Identities=15% Similarity=0.079 Sum_probs=71.0
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~ 111 (165)
.++.||.|....||++.+. ++ .+.||.-...--. . .-...+...|.++|+.+.. | +++++ .+.+.+...
T Consensus 5 ~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-~---~~~~~~~~~E~~il~~l~h--~-~iv~l~~~~~~~~~~~ 77 (381)
T cd05626 5 KIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL-N---RNQVAHVKAERDILAEADN--E-WVVKLYYSFQDKDNLY 77 (381)
T ss_pred EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-h---hHHHHHHHHHHHHHHhcCC--C-CeeeeEEEEecCCEEE
Confidence 5788999999999999875 44 7888875432110 0 0123466778888877643 3 34443 334667788
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
+||||++ +..|.+.+......+ .++.+|...|.-+|...
T Consensus 78 lv~E~~~--gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 78 FVMDYIP--GGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred EEEecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 346777776654332 34667888888888765
No 149
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=95.90 E-value=0.069 Score=41.88 Aligned_cols=106 Identities=19% Similarity=0.107 Sum_probs=71.8
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
++.||.|-.-.||++.+.. + .+++|.-...-... ........|...++.+. . |.. ++++ ..+.....+
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-----~~~~~~~~e~~~~~~l~-~-~~i-~~~~~~~~~~~~~~~ 75 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-----EEREENIREIKILRRLR-H-PNI-VQILDVFQDDNYLYI 75 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-----HHHHHHHHHHHHHHHHT-B-TTB-CHEEEEEEESSEEEE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-----cccchhhhhhhcccccc-c-ccc-ccccccccccccccc
Confidence 5678888888999999874 4 79999887654321 11112234888888883 2 333 3333 335677889
Q ss_pred EEecCCCCchHHHHHHH-cCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLI-AGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~-~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
+||++. ...|.+.+. .+... -.++.+|...|..+|...
T Consensus 76 v~~~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~ 118 (260)
T PF00069_consen 76 VMEYCP--GGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKG 118 (260)
T ss_dssp EEEEET--TEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccc--ccccccccccccccccccccccccccccccccccccc
Confidence 999998 347777776 34433 367888899999999863
No 150
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=95.89 E-value=0.087 Score=42.37 Aligned_cols=104 Identities=16% Similarity=0.057 Sum_probs=68.0
Q ss_pred EeccCCceeEEEEEEeC-----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 045250 38 KEVGDGNLNFVYIVVGT-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM 109 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~ 109 (165)
+.+|.|....||++... .+ .+.+|....... .-...+...|.+.|+.+.. |. +++++. .+...
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~~ 81 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN------PQQWGEFQQEASLMAELHH--PN-IVCLLGVVTQEQP 81 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC------HHHHHHHHHHHHHHhhCCC--CC-eeeEEEEEecCCc
Confidence 78999999999998741 33 788888763211 1112355667778877642 33 344443 46677
Q ss_pred ceEEEecCCCCchHHHHHHHcCC------------------C----CHHHHHHHHHHHHHHHhcc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGI------------------K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~------------------~----~~~~a~~iG~~La~~h~~t 152 (165)
..++||+++ ..+|++.+.... . .-.++.++...|+-+|...
T Consensus 82 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 144 (283)
T cd05090 82 VCMLFEYLN--QGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF 144 (283)
T ss_pred eEEEEEcCC--CCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC
Confidence 789999998 347777764221 0 1247788999999999765
No 151
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=95.86 E-value=0.1 Score=44.15 Aligned_cols=106 Identities=10% Similarity=0.071 Sum_probs=68.5
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCC-----
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRT----- 108 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e----- 108 (165)
.+.||.|....||++.+. +| .++||.-..... -.....|...|.++|+.+.. |..+.-.-.+ +++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~ 77 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-----NLVSCKRVFRELKMLCFFKH--DNVLSALDILQPPHIDPFE 77 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEecccccc-----chHHHHHHHHHHHHHHhCCC--CCcCCHhheecCCCccccc
Confidence 467899999999999975 45 899997542211 12334678889998887753 3322222111 222
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...+|||+++. .|.+.+..+..+ -.++.+|...|.-+|...
T Consensus 78 ~~~lv~e~~~~---~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ 123 (372)
T cd07853 78 EIYVVTELMQS---DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG 123 (372)
T ss_pred eEEEEeecccc---CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 45789999972 466666555433 246778889999999764
No 152
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=95.86 E-value=0.095 Score=43.48 Aligned_cols=84 Identities=15% Similarity=0.059 Sum_probs=52.9
Q ss_pred eEeccCCceeEEEEEEe------CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC
Q 045250 37 IKEVGDGNLNFVYIVVG------TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRT 108 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e 108 (165)
.+.||.|....||++.. .++ .+.||+-..... .-...+...|.++|+.+... |. +..++. +...
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~n-iv~~~~~~~~~ 83 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT------ASEHKALMSELKILIHIGNH-LN-VVNLLGACTKP 83 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccc------hHHHHHHHHHHHHHHHhccC-cc-eeeEEeEecCC
Confidence 57799999999999964 123 688887542211 11234677788888877543 43 444443 3332
Q ss_pred --CceEEEecCCCCchHHHHHHHc
Q 045250 109 --MSLIGMRYLEPPHIILRKGLIA 130 (165)
Q Consensus 109 --~~~~vMEdl~~~~~~lr~~l~~ 130 (165)
...++|||++ +.+|.+.+..
T Consensus 84 ~~~~~lv~ey~~--~g~L~~~l~~ 105 (338)
T cd05102 84 NGPLMVIVEFCK--YGNLSNFLRA 105 (338)
T ss_pred CCceEEEEecCC--CCcHHHHHHh
Confidence 3568899998 3467666654
No 153
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.85 E-value=0.13 Score=43.08 Aligned_cols=101 Identities=16% Similarity=0.104 Sum_probs=65.1
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhcc-CCCCCc-------eEEEEcC
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKL-CPDHVP-------EVYHFDR 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~-~p~~vP-------~v~~~D~ 107 (165)
.+..+ .|.-|-||+|.+++|..|+|.-. .+.+|......+++.+++. .+..+| ..+..+.
T Consensus 11 ~v~~i-~~~~~~v~~v~T~~G~~~Lk~~~-----------~~~~~l~~~~~~~~~L~~~G~~~~~~~~~t~~G~~~~~~~ 78 (309)
T TIGR02904 11 QPEEM-EQVTGKLFKVYTDQGVFALKKLY-----------ADRNTIESFVSQIQVLSEKGFSRIVPVYPTKDGSYYLFHG 78 (309)
T ss_pred Cceee-ecccCcEEEEEeCCCCEEEEEec-----------cchHhHHHHHHHHHHHHHcCCCcCCceeecCCCCeeeEEC
Confidence 34444 33356788999998899999865 1235777888888777652 222222 2333444
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccccc
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYR 157 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l 157 (165)
+...++|++++ +. .....+.-++++|+.||++|..+..+.-
T Consensus 79 ~~~~~L~~wi~-G~--------~~~~~~~~~~~~~~~LA~lH~~~~~~~~ 119 (309)
T TIGR02904 79 HFLYYLMPWLD-IE--------RNEERNYQHESMFQELALLHRKTVKTER 119 (309)
T ss_pred CEEEEEeCCcc-cc--------cccCCHHHHHHHHHHHHHHHHhhhCCCc
Confidence 55578899988 31 1112235689999999999999997543
No 154
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=95.83 E-value=0.28 Score=39.92 Aligned_cols=105 Identities=13% Similarity=0.058 Sum_probs=69.5
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
.++.+|.|....||++.+. ++ .+++|+-..... .-...+...|...|+.+.. |. +.+++ +.++....
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~n-I~~~~~~~~~~~~~~ 80 (301)
T cd07873 10 KLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE------EGAPCTAIREVSLLKDLKH--AN-IVTLHDIIHTEKSLT 80 (301)
T ss_pred EeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc------cCchhHHHHHHHHHHhcCC--CC-cceEEEEEecCCeEE
Confidence 5678999999999999875 34 788897643221 1123456678888877643 32 33333 33556778
Q ss_pred EEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||+++ . .+++.+.+.. .. -.++.+|...|+-+|...
T Consensus 81 lv~e~~~-~--~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ 124 (301)
T cd07873 81 LVFEYLD-K--DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK 124 (301)
T ss_pred EEEeccc-c--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 2 6777665532 11 246778888999898754
No 155
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=95.83 E-value=0.12 Score=42.69 Aligned_cols=105 Identities=13% Similarity=0.055 Sum_probs=61.9
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHH-HHHhhccCCCCCceEE--EEcCCCceEE
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALA-LKEHGKLCPDHVPEVY--HFDRTMSLIG 113 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~-L~~~~~~~p~~vP~v~--~~D~e~~~~v 113 (165)
.||.|....||++.+. +| .+++|.-...... ..-...+...|... ++... .|..+ +++ +.+.+...+|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~~~l~~~~--h~~iv-~~~~~~~~~~~~~lv 74 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL----KKKEQNHIMAERNVLLKNLK--HPFLV-GLHYSFQTAEKLYFV 74 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH----HhhHHHHHHHHHHHHHHhCC--CCCcc-ceeeEEEcCCEEEEE
Confidence 5788888999999886 44 6888865432110 01112233334332 33221 14333 343 3467778899
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||++ + ..|...+.....+ ..++.+|...|+-+|...
T Consensus 75 ~e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 116 (321)
T cd05603 75 LDYVN-G-GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLN 116 (321)
T ss_pred EcCCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 3 3555555554332 246788899999999753
No 156
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=95.83 E-value=0.14 Score=40.81 Aligned_cols=109 Identities=20% Similarity=0.095 Sum_probs=69.0
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC--CCc
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDR--TMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~--e~~ 110 (165)
.+.+|.|....||++.+. +| .+++|........ ....-...+...|..+|+.+.. |..++ ++. .+. ...
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~h--~~i~~-~~~~~~~~~~~~~ 81 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPES--PETSKEVSALECEIQLLKNLQH--ERIVQ-YYGCLRDRAEKTL 81 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCC--chhHHHHHHHHHHHHHHHHcCC--CCeee-EEEEEEcCCCCEE
Confidence 467899999999999875 35 7888875533221 1111123456667778877742 44443 332 222 345
Q ss_pred eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.++||+++ ...|.+.+.++... -.++.++...|+.+|...
T Consensus 82 ~l~~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ 126 (266)
T cd06651 82 TIFMEYMP--GGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM 126 (266)
T ss_pred EEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 68999997 35777777664432 146788888899898655
No 157
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=95.83 E-value=0.19 Score=40.38 Aligned_cols=107 Identities=16% Similarity=0.033 Sum_probs=65.9
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
.+..+|.|...-||++.+. ++ .++||.... ....-...+...|...++.... |..++-. ++.+.....+
T Consensus 8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~------~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~l 79 (277)
T cd06641 8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL------EEAEDEIEDIQQEITVLSQCDS--PYVTKYYGSYLKDTKLWI 79 (277)
T ss_pred hheeEeecCCeEEEEEEECCCCcEEEEEEecc------ccchHHHHHHHHHHHHHHhcCC--CCEeEEEEEEEeCCeEEE
Confidence 4567899999999999865 45 788896431 1111122345556666665532 3333322 2345567889
Q ss_pred EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...+.+.+..+.... .++.++...|..+|...
T Consensus 80 v~e~~~--~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06641 80 IMEYLG--GGSALDLLEPGPLDETQIATILREILKGLDYLHSEK 121 (277)
T ss_pred EEEeCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCC
Confidence 999998 346667676665443 35566677777777543
No 158
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=95.83 E-value=0.25 Score=39.44 Aligned_cols=105 Identities=14% Similarity=0.112 Sum_probs=69.5
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~ 111 (165)
.++.++.|...-||++.+. +| .++||.-..... .-..++...|.++|+.+.. ..+++++. .+.+...
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~ 74 (284)
T cd07836 4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE------EGTPSTAIREISLMKELKH---ENIVRLHDVIHTENKLM 74 (284)
T ss_pred EeeeeccCCceEEEEEEECCCCeEEEEEEeccccc------ccchHHHHHHHHHHHhhcC---CCEeeeeeeEeeCCcEE
Confidence 4677899999999999986 45 788997653221 1223566678888887742 23444443 4566789
Q ss_pred EEEecCCCCchHHHHHHHcCC----CC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGI----KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~----~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||+++ + .+.+.+.... .. -.++.+|...|+-+|...
T Consensus 75 lv~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (284)
T cd07836 75 LVFEYMD-K--DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR 120 (284)
T ss_pred EEEecCC-c--cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 3 4555554422 22 246778888888888653
No 159
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=95.82 E-value=0.13 Score=40.36 Aligned_cols=107 Identities=20% Similarity=0.096 Sum_probs=68.1
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
...++.|...-||++... +| .+++|.-.... . . .....+...|.+.|+.+.. |..++-. ++.+.....++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~-~---~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 77 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK-M-N---RREREEAIDEARVLAKLDS--SYIIRYYESFLDKGKLNIV 77 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhh-C-C---HHHHHHHHHHHHHHHhcCC--CCeehheeeeccCCEEEEE
Confidence 456888888889999875 45 78888643211 0 0 1234566667777776642 3333222 33455678999
Q ss_pred EecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||++ +.+|++.+.+. ... -.++.++...|.-+|...
T Consensus 78 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~ 121 (256)
T cd08529 78 MEYAE--NGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK 121 (256)
T ss_pred EEeCC--CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 35788777663 222 246778888888888643
No 160
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=95.82 E-value=0.072 Score=43.10 Aligned_cols=105 Identities=15% Similarity=0.021 Sum_probs=64.0
Q ss_pred ccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEEEec
Q 045250 40 VGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTMSLIGMRY 116 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~~~~vMEd 116 (165)
||.|....||++.+. +| .+++|.-....... .-..++...|.++|+.++. |..++-...+ +.....+||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv~e~ 74 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK----RKGYEGAMVEKRILAKVHS--RFIVSLAYAFQTKTDLCLVMTI 74 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh----hHHHHHHHHHHHHHHhCCC--CcEeeeeEEEcCCCeEEEEEeC
Confidence 577888899999875 45 78888754321110 1122456678888877743 4333333333 44456799999
Q ss_pred CCCCchHHHHHHHc----CC-CCH----HHHHHHHHHHHHHHhcc
Q 045250 117 LEPPHIILRKGLIA----GI-KYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 l~~~~~~lr~~l~~----g~-~~~----~~a~~iG~~La~~h~~t 152 (165)
++ ..+|+..+.. +. ... .++.+|...|+-+|...
T Consensus 75 ~~--~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 117 (280)
T cd05608 75 MN--GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR 117 (280)
T ss_pred CC--CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 97 3456555422 11 221 36778888898898753
No 161
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=95.78 E-value=0.22 Score=38.95 Aligned_cols=107 Identities=16% Similarity=0.068 Sum_probs=68.2
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
.++.+|.|....||++.+. ++ .++||.-....-. .-...+...|.++|+.+.. |..++-. .+.+.....+
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~l 76 (256)
T cd08220 4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-----KDERLAAQNECQVLKLLSH--PNIIEYYENFLEDKALMI 76 (256)
T ss_pred EEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-----cHHHHHHHHHHHHHhhCCC--CchhheeeeEecCCEEEE
Confidence 3567899988899999875 33 7888886422110 1123566778888887743 4332222 2345677899
Q ss_pred EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhc
Q 045250 113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~ 151 (165)
|||+++ ...|.+.+.+. ... -.++.++...|+.+|..
T Consensus 77 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 77 VMEYAP--GGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred EEecCC--CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 999998 34677776552 222 23566788888888854
No 162
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=95.78 E-value=0.072 Score=42.71 Aligned_cols=105 Identities=17% Similarity=0.072 Sum_probs=66.9
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
++.+|.|....||++.+. ++ .+++|.-.... ..-..++...|.+.|+.+.. |. +++++ +.+.....+
T Consensus 9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~l 79 (277)
T cd06642 9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE------AEDEIEDIQQEITVLSQCDS--PY-ITRYYGSYLKGTKLWI 79 (277)
T ss_pred HHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc------chHHHHHHHHHHHHHHcCCC--Cc-cHhhhcccccCCceEE
Confidence 456788888899999875 45 78888654221 11123456667777766532 33 22233 346667889
Q ss_pred EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...|.+.+..+... ..++.+|...|+-+|...
T Consensus 80 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (277)
T cd06642 80 IMEYLG--GGSALDLLKPGPLEETYIATILREILKGLDYLHSER 121 (277)
T ss_pred EEEccC--CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 999998 34677776655433 246778888888888544
No 163
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=95.77 E-value=0.3 Score=38.36 Aligned_cols=104 Identities=20% Similarity=0.137 Sum_probs=68.0
Q ss_pred eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
-.+.+|.|...-||++...++ .+++|.-..- .........|.+.|+.+.. |..++-. ++.+.....++
T Consensus 8 ~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 8 LVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG--------AMSEEDFIEEAQVMMKLSH--PKLVQLYGVCTERSPICLV 77 (256)
T ss_pred EEeeecCcccceEEEEEEeCCCeEEEEECCCC--------CCCHHHHHHHHHHHHhCCC--CCeeeEEEEEccCCceEEE
Confidence 357788898899999987655 7888854311 2344567778888887753 4433332 23355677899
Q ss_pred EecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 045250 114 MRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~ 151 (165)
||++. ...|.+.+... ... -.++.++...|+.+|..
T Consensus 78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (256)
T cd05112 78 FEFME--HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS 119 (256)
T ss_pred EEcCC--CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99998 34677766542 222 24566777888888854
No 164
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=95.77 E-value=0.27 Score=39.19 Aligned_cols=105 Identities=14% Similarity=0.063 Sum_probs=68.4
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
...+|.|..+.||++.+. +| .++||.-...... .-...+...|..+++.+. .|.. ++++ +.+.....+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-----~~~~~~~~~e~~~l~~~~--~~~i-~~~~~~~~~~~~~~~ 76 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-----GGIPNQALREIKALQACQ--HPYV-VKLLDVFPHGSGFVL 76 (286)
T ss_pred EeecccCCCcEEEEEEECCCCceEEEEEEEccccc-----chhhHHHHHHHHHHHhCC--CCCC-cceeeEEecCCeeEE
Confidence 467899999999999875 45 8999975432211 122356777888888776 3443 3333 346677889
Q ss_pred EEecCCCCchHHHHHHHc-CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIA-GI-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~-g~-~~----~~~a~~iG~~La~~h~~t 152 (165)
|||+++. .|.+.+.. +. .. -.++.+|...|+.+|...
T Consensus 77 v~e~~~~---~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 119 (286)
T cd07832 77 VMEYMPS---DLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG 119 (286)
T ss_pred EecccCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999952 45555433 22 11 246778888999998764
No 165
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=95.77 E-value=0.13 Score=42.70 Aligned_cols=103 Identities=14% Similarity=0.083 Sum_probs=66.4
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~vM 114 (165)
.+|.|....||++.+. +| .+.+|......-.. .-...+...|.++|+.... | ++++++ +.+.+...+||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~----~~~~~~~~~e~~~l~~~~h--p-~i~~~~~~~~~~~~~~lv~ 74 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA----KDEVAHTLTENRVLQNSRH--P-FLTALKYSFQTHDRLCFVM 74 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCCC--C-CCCceEEEEEcCCEEEEEE
Confidence 5788999999999875 45 78888765432110 1123455667777765432 3 344443 34566778999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 045250 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~ 150 (165)
||++ ...|...+..+... -.++.+|...|+-+|.
T Consensus 75 E~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~ 113 (325)
T cd05594 75 EYAN--GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 113 (325)
T ss_pred eCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9998 34676766655433 2466788888999996
No 166
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=95.75 E-value=0.19 Score=39.29 Aligned_cols=108 Identities=15% Similarity=0.052 Sum_probs=66.4
Q ss_pred EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEE
Q 045250 38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~v 113 (165)
+.+|.|...-||++.+. ++ .+++|....--. .....--..+...|...|+.+.. | .+++++ ..+.....++
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~~~e~~~l~~~~h--~-~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADD--GQTGQEAVKQLEQEIALLSKLQH--P-NIVQYLGTEREEDNLYIF 80 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccc--cccchHHHHHHHHHHHHHHhcCC--C-CchheeeeEecCCeEEEE
Confidence 55788888899999876 55 899997532111 00011123456667777766632 3 333333 3455677899
Q ss_pred EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ...|.+.+.+... . -.++.+|...|+-+|...
T Consensus 81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 122 (258)
T cd06632 81 LELVP--GGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN 122 (258)
T ss_pred EEecC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99997 3467776655432 2 246778888888888654
No 167
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=95.75 E-value=0.25 Score=39.74 Aligned_cols=105 Identities=15% Similarity=0.087 Sum_probs=69.1
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~ 111 (165)
.+..+|.|....||++.+. ++ .++||.-...... -.......|.++|+.+.. |. +.++ +..+.+...
T Consensus 9 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~------~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~ 79 (291)
T cd07844 9 KLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE------GAPFTAIREASLLKDLKH--AN-IVTLHDIIHTKKTLT 79 (291)
T ss_pred EEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc------CCchhHHHHHHHHhhCCC--cc-eeeEEEEEecCCeEE
Confidence 4578899999999999886 44 7999986543321 112244568888887743 32 3333 345667788
Q ss_pred EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ . .|.+.+.... .. -.++.++...|.-+|...
T Consensus 80 lv~e~~~-~--~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~ 123 (291)
T cd07844 80 LVFEYLD-T--DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR 123 (291)
T ss_pred EEEecCC-C--CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 3 5666665422 22 245667888888888654
No 168
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=95.72 E-value=0.2 Score=39.26 Aligned_cols=103 Identities=18% Similarity=0.161 Sum_probs=69.1
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
++.+|.|...-||++.+.+ | .++||.-.... .+....+...|.+.++.+. .| .+++++ +.+.....+
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~------~~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~~~~~~l 76 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDG------DEEFRKQLLRELKTLRSCE--SP-YVVKCYGAFYKEGEISI 76 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCc------chHHHHHHHHHHHHHHhcC--CC-CeeeEEEEEccCCeEEE
Confidence 4567777777889998873 5 79989754321 1123456667777777665 24 344444 345577889
Q ss_pred EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHh
Q 045250 113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~ 150 (165)
+||+++ ...|++.+..... . -.++.++...|+.+|.
T Consensus 77 v~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~ 117 (264)
T cd06623 77 VLEYMD--GGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHT 117 (264)
T ss_pred EEEecC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 999998 4578888765332 2 2577888899998997
No 169
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=95.72 E-value=0.15 Score=42.03 Aligned_cols=107 Identities=14% Similarity=0.023 Sum_probs=70.4
Q ss_pred eeEeccCCceeEEEEEEeC-CC-----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~ 109 (165)
.+..+|.|....||++... +| .+.||.-.+. ...-...+...|..+|+.+.. |..++-.-.+..+.
T Consensus 11 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~~~e~~~l~~l~h--~niv~~~g~~~~~~ 82 (316)
T cd05108 11 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA------TSPKANKEILDEAYVMASVDN--PHVCRLLGICLTST 82 (316)
T ss_pred eeeeeecCCCceEEEEEEecCCCccceeEEEEecccc------CCHHHHHHHHHHHHHHHhCCC--CCCCeEEEEEcCCC
Confidence 5678999999999999753 33 2666765421 122234567778888776632 44444333344567
Q ss_pred ceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t 152 (165)
..++||+++ ...|.+.+.+... . -.++.+|...|+-+|...
T Consensus 83 ~~~v~e~~~--~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 129 (316)
T cd05108 83 VQLITQLMP--FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR 129 (316)
T ss_pred ceeeeecCC--CCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 789999998 4577777776432 1 257789999999999754
No 170
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=95.71 E-value=0.093 Score=41.01 Aligned_cols=106 Identities=17% Similarity=0.071 Sum_probs=68.7
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~~ 112 (165)
.+.++.|...-||++... +| .+++|.-.... .+.....+...|.+.|+.+. .| .++++ ++.+.....+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~~~~~~~ 76 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGS-----MSQKEREDAVNEIRILASVN--HP-NIISYKEAFLDGNKLCI 76 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhh-----ccHHHHHHHHHHHHHHHhCC--CC-CchhhhhhhccCCEEEE
Confidence 567888988899999765 44 78888654222 12233456667777777765 23 23333 4456688899
Q ss_pred EEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...|.+.+.. +... -.++.++...|+.+|...
T Consensus 77 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~ 123 (256)
T cd08530 77 VMEYAP--FGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK 123 (256)
T ss_pred EehhcC--CCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 999997 3466665544 2222 256778888888888664
No 171
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=95.71 E-value=0.22 Score=40.69 Aligned_cols=106 Identities=18% Similarity=0.153 Sum_probs=69.9
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
.++.+|.|....||++.+. +| .+++|.-... . ....++...|..+|+.... |..++-+ ++.+.+...+
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~------~-~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 23 RFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQ------Q-QPKKELIINEILVMRENKN--PNIVNYLDSYLVGDELWV 93 (297)
T ss_pred eeeeeccCCCeEEEEEEECCCCCEEEEEEEecC------c-cchHHHHHHHHHHHHhCCC--CCEeeEEEEEecCCEEEE
Confidence 5678999999999999874 45 8999964311 1 1223566677777776533 4434333 3446677889
Q ss_pred EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...|.+.+.++... ..++.++...|+.+|...
T Consensus 94 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ 135 (297)
T cd06656 94 VMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQ 135 (297)
T ss_pred eecccC--CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 34676766554432 356677888888888653
No 172
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=95.70 E-value=0.18 Score=40.51 Aligned_cols=106 Identities=13% Similarity=0.100 Sum_probs=69.2
Q ss_pred eeEeccCCceeEEEEEEeCC------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 045250 36 TIKEVGDGNLNFVYIVVGTS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D 106 (165)
-++.+|.|....||++.... + .+++|........ ........|..+|+.+.. | ++.+++ +++
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~------~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~ 80 (277)
T cd05036 10 LLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE------QDESDFLMEALIMSKFNH--Q-NIVRLIGVSFE 80 (277)
T ss_pred eeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH------HHHHHHHHHHHHHHhCCC--C-CEeeEEEEEcc
Confidence 45689999999999998753 3 6888866432211 112345567777776643 4 344444 556
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC-------C-----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIK-------Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~-------~-----~~~a~~iG~~La~~h~~t 152 (165)
.+...++||++. ..+|++.+..... . -.++.+|...|+-+|...
T Consensus 81 ~~~~~lv~e~~~--g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 136 (277)
T cd05036 81 RLPRFILLELMA--GGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH 136 (277)
T ss_pred CCCcEEEEecCC--CCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 677899999997 3577777655321 1 147788888888888663
No 173
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=95.69 E-value=0.14 Score=42.51 Aligned_cols=105 Identities=13% Similarity=0.104 Sum_probs=63.8
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHH-HHhhccCCCCCceEE--EEcCCCceEE
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALAL-KEHGKLCPDHVPEVY--HFDRTMSLIG 113 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L-~~~~~~~p~~vP~v~--~~D~e~~~~v 113 (165)
.||.|....||++.+. +| .++||+-...... ..-...+...|...+ +.+. -| ++++++ +.+.+...+|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~~~~~l~--hp-~iv~~~~~~~~~~~~~lv 74 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL----KKKEQKHIMAERNVLLKNVK--HP-FLVGLHYSFQTADKLYFV 74 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhHHHHHHHHHHHHHhhCC--CC-CCCCeeEEEEeCCEEEEE
Confidence 5788888999999986 45 7999975432110 111223344444432 2221 13 334443 3366778899
Q ss_pred EecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
|||++ ...|...+..+...+ .++.+|...|.-+|...
T Consensus 75 ~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~g 116 (323)
T cd05575 75 LDYVN--GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLN 116 (323)
T ss_pred EcCCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 346777666554332 36778889999999754
No 174
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=95.69 E-value=0.21 Score=39.98 Aligned_cols=106 Identities=16% Similarity=0.131 Sum_probs=68.8
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~ 111 (165)
.+..+|.|...-||++.+. +| .++||....... .. -...+...|.+.|+.+.. |. +.++ ++.+.+...
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~--~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~ 75 (284)
T cd07860 4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE---TE--GVPSTAIREISLLKELNH--PN-IVKLLDVIHTENKLY 75 (284)
T ss_pred eeeeecCCCceEEEEEEECCCCCEEEEEEcccccc---cc--ccchHHHHHHHHHHhcCC--CC-CcchhhhcccCCcEE
Confidence 3677899999999999875 45 788886542221 11 122466778888888753 33 2222 234777889
Q ss_pred EEEecCCCCchHHHHHHHc---CCCC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIA---GIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~---g~~~----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ . .++..+.. +... -.++.++...|+-+|...
T Consensus 76 ~v~e~~~-~--~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (284)
T cd07860 76 LVFEFLH-Q--DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120 (284)
T ss_pred EEeeccc-c--CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999997 2 45555544 2222 256778888899998764
No 175
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=95.67 E-value=0.25 Score=39.63 Aligned_cols=105 Identities=19% Similarity=0.068 Sum_probs=68.1
Q ss_pred eeEeccCCceeEEEEEEe-----CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----
Q 045250 36 TIKEVGDGNLNFVYIVVG-----TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF---- 105 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---- 105 (165)
-++.+|.|+...||++.. .++ .++||.-..... -...+...|.++|+.+.. |. +++++.+
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~ 77 (284)
T cd05081 8 FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA-------EHLRDFEREIEILKSLQH--DN-IVKYKGVCYSA 77 (284)
T ss_pred eeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH-------HHHHHHHHHHHHHHhCCC--CC-eeEEEEEEccC
Confidence 467899999999999873 234 788887442211 112456678888777642 43 4444432
Q ss_pred cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 106 DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 D~e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
+.....+||||++ ..+|++.+.+.. .. -.++.++...|+.+|...
T Consensus 78 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~ 128 (284)
T cd05081 78 GRRNLRLVMEYLP--YGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR 128 (284)
T ss_pred CCCceEEEEEecC--CCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 2345679999998 457887776432 22 246788889999999764
No 176
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=95.66 E-value=0.18 Score=43.13 Aligned_cols=109 Identities=13% Similarity=-0.002 Sum_probs=68.7
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
.+..+|.|....||++.... + .+.+|.-...-... .-...+...|..+++.... |..++-. .+.+.....+
T Consensus 47 ~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~i~~~~~h--p~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 47 VVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK----RSDSAFFWEERDIMAFANS--PWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhhHHHHHHHHHHHHhCCC--CCEeeEEEEEEcCCEEEE
Confidence 56779999999999999863 4 67888754221110 0122345566667765432 4333322 2346667889
Q ss_pred EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
||||++ ...|.+.+..+.... .++.+|...|.-+|...
T Consensus 121 v~Ey~~--gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~ 162 (370)
T cd05621 121 VMEYMP--GGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG 162 (370)
T ss_pred EEcCCC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 357777665544332 36678888888888754
No 177
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=95.65 E-value=0.23 Score=39.65 Aligned_cols=106 Identities=15% Similarity=0.008 Sum_probs=68.6
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
+..+|.|..+-||++.+. ++ .+++|.-.. ....-.......|.++++.+.. |..++-. ++.+.....+|
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~------~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~v 77 (274)
T cd06609 6 LECIGKGSFGEVYKAIDKRTNQVVAIKVIDL------EEAEDEIEDIQQEIQFLSQCRS--PYITKYYGSFLKGSKLWII 77 (274)
T ss_pred hhhhcCCCCeEEEEEEECCCCeEEEEEEeec------cccchHHHHHHHHHHHHHHcCC--CCeeeeeEEEEECCeEEEE
Confidence 356788888999999876 45 788887431 1111223455667777877762 4433333 34566677899
Q ss_pred EecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ +..|.+.+..+... -.++.+|...|.-+|...
T Consensus 78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~ 118 (274)
T cd06609 78 MEYCG--GGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEG 118 (274)
T ss_pred EEeeC--CCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99998 45777777665433 246677777888888764
No 178
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=95.64 E-value=0.26 Score=39.15 Aligned_cols=106 Identities=19% Similarity=0.109 Sum_probs=69.5
Q ss_pred eEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCce
Q 045250 37 IKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSL 111 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~ 111 (165)
.+.+|.|....||++...+ . .++||........ -..++...|...|+.+.. |..++-.-.+..+...
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~------~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~ 82 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSP------SVREKFLQEAYIMRQFDH--PHIVKLIGVITENPVW 82 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCH------HHHHHHHHHHHHHHhCCC--CchhceeEEEcCCCcE
Confidence 4578888888999987532 2 6888876543311 123456667777777643 5544443334456677
Q ss_pred EEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||+++ +..|++.+.... .+ -.++.++...|+-+|...
T Consensus 83 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 127 (270)
T cd05056 83 IVMELAP--LGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR 127 (270)
T ss_pred EEEEcCC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 458888886643 21 246788899999999764
No 179
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=95.63 E-value=0.22 Score=39.30 Aligned_cols=104 Identities=20% Similarity=0.015 Sum_probs=68.2
Q ss_pred eccCCceeEEEEEEeC--C--C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEE
Q 045250 39 EVGDGNLNFVYIVVGT--S--G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIG 113 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~--~--g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~v 113 (165)
.||.|....||++... + + .+++|.-..... .-..++...|..+|+.+.. |..++-.-.+..+...++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~v 73 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI------AAGKKEFLREASVMAQLDH--PCIVRLIGVCKGEPLMLV 73 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccc------hHHHHHHHHHHHHHHhcCC--CCeeeEEEEEcCCceEEE
Confidence 5788888999988643 2 2 688887553321 1123456677778876643 444443334455667899
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|.+.+..+... -.++.++...|+.+|...
T Consensus 74 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ 115 (257)
T cd05060 74 MELAP--LGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH 115 (257)
T ss_pred EEeCC--CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 99997 34788888765522 357788888899888665
No 180
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=95.63 E-value=0.34 Score=39.24 Aligned_cols=105 Identities=14% Similarity=0.175 Sum_probs=71.0
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
....+|.|....||++.+. ++ .+++|... . .+.-..+....|...++.+.. | .+.+++ +.+.+...
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~----~---~~~~~~~~~~~e~~~l~~~~h--~-~vv~~~~~~~~~~~~~ 92 (285)
T cd06648 23 NFVKIGEGSTGIVCIATDKSTGRQVAVKKMD----L---RKQQRRELLFNEVVIMRDYQH--P-NIVEMYSSYLVGDELW 92 (285)
T ss_pred cceEeccCCCeEEEEEEECCCCCEEEEEEEe----c---cchhHHHHHHHHHHHHHHcCC--C-ChheEEEEEEcCCeEE
Confidence 5779999999999999865 44 79999631 1 111123344556667766642 3 333343 34678889
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
++||+++ ..+|++.+..+.... .++.+|...|+-+|...
T Consensus 93 ~v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ 135 (285)
T cd06648 93 VVMEFLE--GGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQG 135 (285)
T ss_pred EEEeccC--CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 357888877765432 47788899999998754
No 181
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=95.62 E-value=0.37 Score=39.41 Aligned_cols=105 Identities=11% Similarity=0.051 Sum_probs=68.5
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
.++.+|.|....||++.+. ++ .+++|.-..... .-...+...|.+.|+.+.. |. +.+++ +.+.+...
T Consensus 10 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~ 80 (309)
T cd07872 10 KLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE------EGAPCTAIREVSLLKDLKH--AN-IVTLHDIVHTDKSLT 80 (309)
T ss_pred EEEEecccCCEEEEEEEecCCCCeEEEEEeecccc------CCcchhHHHHHHHHHhCCC--CC-cceEEEEEeeCCeEE
Confidence 5678999999999999876 34 788897542211 1122356678888877643 33 23333 33567788
Q ss_pred EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ . .+.+.+... ... ..++.+|...|+-+|...
T Consensus 81 lv~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ 124 (309)
T cd07872 81 LVFEYLD-K--DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK 124 (309)
T ss_pred EEEeCCC-C--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 2 455555442 221 246778899999999754
No 182
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=95.61 E-value=0.15 Score=40.32 Aligned_cols=107 Identities=14% Similarity=0.027 Sum_probs=64.1
Q ss_pred EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 045250 38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~v 113 (165)
+++|.|....||++.+. +| .++||.-....-. -.-...+...|...+..... ...+++++.+ +.+...+|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~e~~~~~~~~~--~~~i~~~~~~~~~~~~~~lv 75 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI----AKNQVTNVKAERAIMMIQGE--SPYVAKLYYSFQSKDYLYLV 75 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh----HHHHHHHHHHHHHHHhhcCC--CCCeeeeeeeEEcCCeEEEE
Confidence 46888989999999875 44 7888864311100 00111233445444433222 2344555544 44567899
Q ss_pred EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ...|.+.+..... . -.++.+|...|.-+|...
T Consensus 76 ~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ 117 (260)
T cd05611 76 MEYLN--GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRG 117 (260)
T ss_pred EeccC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 3577776655332 2 257788889999998754
No 183
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=95.61 E-value=0.24 Score=42.24 Aligned_cols=109 Identities=15% Similarity=0.038 Sum_probs=68.6
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~~~~ 112 (165)
.++.||.|....||++... +| .+++|+-...-... .........|.++|+.... |..++-...+ +.....+
T Consensus 47 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~il~~~~h--~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 47 VIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK----RSDSAFFWEERDIMAHANS--EWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhhHHHHHHHHHHHHhCCC--CCcceEEEEEecCCEEEE
Confidence 5677999999999999876 44 78889854221100 0122334567777776542 4444443333 4455679
Q ss_pred EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
||||++ +..|.+.+..+.... .++.+|...|+-+|...
T Consensus 121 v~Ey~~--gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ 162 (370)
T cd05596 121 VMEYMP--GGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMG 162 (370)
T ss_pred EEcCCC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 346777665554332 35667888888888653
No 184
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=95.60 E-value=0.36 Score=38.97 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=67.7
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
....+|.|....||++.+. +| .+++|.-..... ..--.++...|.+.|+.+.. |. +++++ +.+.....
T Consensus 6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~ 77 (294)
T PLN00009 6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-----DEGVPSTAIREISLLKEMQH--GN-IVRLQDVVHSEKRLY 77 (294)
T ss_pred EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-----cccchHHHHHHHHHHHhccC--CC-EeeEEEEEecCCeEE
Confidence 3567899999999999876 45 799996432110 01122455678888887743 33 33333 44678889
Q ss_pred EEEecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ . .+.+.+..... . -.++.+|...|.-+|...
T Consensus 78 lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 122 (294)
T PLN00009 78 LVFEYLD--L-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR 122 (294)
T ss_pred EEEeccc--c-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 2 45555544221 1 246778888888888654
No 185
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=95.60 E-value=0.2 Score=42.74 Aligned_cols=109 Identities=14% Similarity=0.056 Sum_probs=68.0
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~~~~ 112 (165)
-++.+|.|....||++... ++ .+++|.-...-... . -...+...|..+|+.... |..++-...+ +.....+
T Consensus 47 i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~-~---~~~~~~~~e~~i~~~~~h--p~iv~~~~~~~~~~~~~l 120 (371)
T cd05622 47 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-R---SDSAFFWEERDIMAFANS--PWVVQLFYAFQDDRYLYM 120 (371)
T ss_pred EEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhh-h---HHHHHHHHHHHHHHhCCC--CCCCeEEEEEEcCCEEEE
Confidence 5678999999999999886 34 78888754221110 0 112344556666665432 4444333233 5556779
Q ss_pred EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
||||++ +..|.+.+..+.... .++.+|...|.-+|...
T Consensus 121 v~Ey~~--gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 162 (371)
T cd05622 121 VMEYMP--GGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 162 (371)
T ss_pred EEcCCC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 346777666554332 35678888888898653
No 186
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=95.58 E-value=0.27 Score=40.20 Aligned_cols=105 Identities=14% Similarity=0.125 Sum_probs=69.4
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
...+|.|....||++... +| .++||... .. . .-...+...|...|+.+.. |..++-. ++.+.+...++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~--~~---~--~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~lv 95 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMD--LR---K--QQRRELLFNEVVIMRDYQH--ENVVEMYNSYLVGDELWVV 95 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEec--cc---c--hhHHHHHHHHHHHHHhcCC--cchhheeeEEEeCCEEEEE
Confidence 456899999999999874 55 79999632 11 1 1123455667777776653 3322222 45577889999
Q ss_pred EecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|++.+..+... -.++.++...|+-+|...
T Consensus 96 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~g 136 (292)
T cd06657 96 MEFLE--GGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQG 136 (292)
T ss_pred EecCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 34677766555432 257778888888888753
No 187
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=95.58 E-value=0.27 Score=38.67 Aligned_cols=106 Identities=20% Similarity=0.143 Sum_probs=70.6
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~ 112 (165)
.+.+|.|....||++.+. ++ .+++|.-..- ...+-...+...|.++++.+.. ..+.+++.+ +.+...+
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~-----~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~~~~~~l 76 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQ-----DNDPKTIKEIADEMKVLELLKH---PNLVKYYGVEVHREKVYI 76 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECc-----ccchHHHHHHHHHHHHHHhCCC---CChhheeeeEecCCEEEE
Confidence 467899999999999875 44 7888873211 1112334566677777776643 344455544 4567899
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...|++.+.++... -.++.++...|+.+|...
T Consensus 77 v~e~~~--~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 119 (264)
T cd06626 77 FMEYCS--GGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG 119 (264)
T ss_pred EEecCC--CCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 45788877665322 246678888888888755
No 188
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=95.58 E-value=0.15 Score=41.06 Aligned_cols=104 Identities=16% Similarity=0.082 Sum_probs=66.5
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
++.+|.|..+-||++... +| .+++|....... .-...+...|.++|+.+.. |..++-. ++.+.....+|
T Consensus 10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK------SSVRKQILRELQIMHECRS--PYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc------chHHHHHHHHHHHHHHcCC--CCcceEeeeEecCCEEEEE
Confidence 457889999999999876 35 677776432111 1224567778888877642 3333322 44566788999
Q ss_pred EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHh
Q 045250 114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~ 150 (165)
|||++ ...|.+.+..... . -.++.++...|.-+|.
T Consensus 82 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 121 (284)
T cd06620 82 MEFMD--CGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYN 121 (284)
T ss_pred EecCC--CCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99998 3467666655332 2 2456677777777874
No 189
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=95.55 E-value=0.06 Score=45.68 Aligned_cols=106 Identities=20% Similarity=0.197 Sum_probs=70.8
Q ss_pred EeccCCceeEEEEEEeCCC-eEEEEecC-------------ccccc-cCCCC-CCChHHHHHHHHHHHHhhccCCCCCce
Q 045250 38 KEVGDGNLNFVYIVVGTSG-SFVIKQAL-------------PYVRC-IGESW-PMTKERAYFEALALKEHGKLCPDHVPE 101 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~-------------p~~r~-~~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~ 101 (165)
.+||-|-=..||-+.+++| .++||.=+ .|++. ..-+| -++.-=+..|.++|+.+... ...||+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~-G~~VP~ 175 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE-GVKVPK 175 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc-CCCCCC
Confidence 6678888888999999877 89988533 33321 11235 44444566777789888775 678999
Q ss_pred EEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHH
Q 045250 102 VYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKT 148 (165)
Q Consensus 102 v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~ 148 (165)
++ |.+.|++|||++. +..|+..=..-+..+.+...|-..++..
T Consensus 176 P~--~~nRHaVvMe~ie--G~eL~~~r~~~en~~~il~~il~~~~~~ 218 (304)
T COG0478 176 PI--AWNRHAVVMEYIE--GVELYRLRLDVENPDEILDKILEEVRKA 218 (304)
T ss_pred cc--ccccceeeeehcc--cceeecccCcccCHHHHHHHHHHHHHHH
Confidence 99 8889999999998 3455442223334456666665555544
No 190
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=95.53 E-value=0.32 Score=38.58 Aligned_cols=109 Identities=17% Similarity=0.067 Sum_probs=67.9
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC--Cc
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT--MS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e--~~ 110 (165)
.+.+|.|....||++.+. +| .+++|.-...... ..-.-...+...|.++|+.+.. |..+ +++.+ |.+ ..
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~~~ei~~l~~l~h--~~i~-~~~~~~~~~~~~~~ 81 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDS--QETSKEVNALECEIQLLKNLRH--DRIV-QYYGCLRDPEEKKL 81 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCccc--chhhHHHHHHHHHHHHHHHcCC--CCcc-eEEEEEEcCCCCEE
Confidence 467888999999999875 45 7888974321111 1111233466678888887753 4433 33332 333 35
Q ss_pred eEEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t 152 (165)
.++||+++ ...|.+.+.... .. -.++.+|...|.-+|...
T Consensus 82 ~~v~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~ 126 (264)
T cd06653 82 SIFVEYMP--GGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM 126 (264)
T ss_pred EEEEEeCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 78999997 456777666533 22 246778888888888554
No 191
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=95.53 E-value=0.18 Score=40.72 Aligned_cols=109 Identities=17% Similarity=0.035 Sum_probs=70.3
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
++.+|.|....||++.+. +| .++||.-...... .....-..+...|.+.|+.+. .|..++-. ++.+.....+|
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERK--EAKDGINFTALREIKLLQELK--HPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccc--cccchhhHHHHHHHHHHhhcC--CCCChhhhheeecCCEEEEE
Confidence 356899999999999875 45 8999986544321 111122334556777777665 24444333 23344567899
Q ss_pred EecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ..|++.+.... .. -.++.+|...|+-+|...
T Consensus 81 ~e~~~---~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 122 (298)
T cd07841 81 FEFME---TDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW 122 (298)
T ss_pred EcccC---CCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99995 26777776544 22 257788899999999765
No 192
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=95.51 E-value=0.35 Score=39.48 Aligned_cols=106 Identities=18% Similarity=0.157 Sum_probs=67.4
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC--CC
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR--TM 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~--e~ 109 (165)
.+..+|.|....||++.+. +| .+++|....... ..+... +...|.++|+.+.. |. +.+++.+ +. +.
T Consensus 11 ~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~---~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~ 82 (309)
T cd07845 11 KLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE--RDGIPI---SSLREITLLLNLRH--PN-IVELKEVVVGKHLDS 82 (309)
T ss_pred EeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC--CCCCcc---hhhHHHHHHHhCCC--CC-CcceEEEEecCCCCe
Confidence 5667899999999999986 45 788896542211 112222 34458888877653 33 3333332 22 45
Q ss_pred ceEEEecCCCCchHHHHHHHcCC--C----CHHHHHHHHHHHHHHHhcc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGI--K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~--~----~~~~a~~iG~~La~~h~~t 152 (165)
..+|||+++. .+.+.+.... . ...++.+|...|+.+|...
T Consensus 83 ~~lv~e~~~~---~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 128 (309)
T cd07845 83 IFLVMEYCEQ---DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF 128 (309)
T ss_pred EEEEEecCCC---CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 7899999982 4555555422 1 1357888899999999865
No 193
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=95.50 E-value=0.24 Score=39.31 Aligned_cols=105 Identities=15% Similarity=0.101 Sum_probs=70.1
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
++.++.|..+-||++... +| .+++|+-..... .+-...+...|.++|+.+.. |. +.+++ ..+.....+
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~~ 75 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-----SEGIPKTALREIKLLKELNH--PN-IIKLLDVFRHKGDLYL 75 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-----cchhHHHHHHHHHHHHHhcC--CC-cchHHHhhccCCCEEE
Confidence 467888999999999876 45 799997543322 11234567778888887752 33 22233 346677889
Q ss_pred EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ . .+.+.+... ... -.++.+|...|+.+|...
T Consensus 76 v~e~~~-~--~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 118 (283)
T cd05118 76 VFEFMD-T--DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG 118 (283)
T ss_pred EEeccC-C--CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999997 2 566666553 222 257788899999998764
No 194
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=95.46 E-value=0.37 Score=38.43 Aligned_cols=107 Identities=16% Similarity=0.146 Sum_probs=68.4
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
+..++.|..+.||++.+. +| .+++|.-.... ....-......|..+|+.+.. |..++-+ ++.+.....+|
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESE-----DDPVIKKIALREIRMLKQLKH--PNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred eeeecccCCeEEEEEEECCCCcEEEEEEEeecc-----cCccccHHHHHHHHHHHhCCC--CCEeeeeeEEeeCCEEEEE
Confidence 467899999999999886 45 78888643211 111122445678888877653 3322222 23355667899
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|...+...... -.++.+|...|+-+|...
T Consensus 79 ~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~ 120 (286)
T cd07847 79 FEYCD--HTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN 120 (286)
T ss_pred EeccC--ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 35676665544322 257788888999999754
No 195
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=95.45 E-value=0.28 Score=39.54 Aligned_cols=104 Identities=15% Similarity=0.085 Sum_probs=63.3
Q ss_pred ccCCceeEEEEEEeC-CC-eEEEEecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEEEe
Q 045250 40 VGDGNLNFVYIVVGT-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTMSLIGMR 115 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~~~~vME 115 (165)
||.|....||++... +| .+.+|.-... ++. .........|.++|+.+.. |..++-...+ +.....+|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-----~~~~~~~~~E~~il~~l~h--p~i~~~~~~~~~~~~~~lv~e 73 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK-----KSGEKMALLEKEILEKVNS--PFIVNLAYAFESKTHLCLVMS 73 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc-----chhhHHHHHHHHHHHhcCC--CcEEEEEEEEecCCeEEEEEe
Confidence 567888889999875 45 7777865321 111 0111233458888887743 5444443333 4455679999
Q ss_pred cCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250 116 YLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
|++ +.+|++.+.... .. -.++.+|...|+-+|...
T Consensus 74 ~~~--g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 115 (277)
T cd05607 74 LMN--GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD 115 (277)
T ss_pred cCC--CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 998 346766654321 11 246678899999999643
No 196
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=95.43 E-value=0.45 Score=37.76 Aligned_cols=106 Identities=15% Similarity=0.026 Sum_probs=69.6
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC--CCce
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDR--TMSL 111 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~--e~~~ 111 (165)
++.+|.|..+.||++...+ | .+++|.-...... + -.......|.+.|+.+. .|..++-. +..+. ....
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~----~-~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~~ 76 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEK----E-GFPITAIREIKLLQKLR--HPNIVRLKEIVTSKGKGSIY 76 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEeccccc----c-cchHHHHHHHHHHHhcc--CCCeeeheeeEecCCCCcEE
Confidence 5678999999999998864 5 7889987754311 1 11134556888888775 24444333 22233 6789
Q ss_pred EEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||+.+ . .+.+.+... ... -.++.+|...|+-+|...
T Consensus 77 lv~e~~~-~--~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ 120 (287)
T cd07840 77 MVFEYMD-H--DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG 120 (287)
T ss_pred EEecccc-c--cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 2 566666553 222 246778888899898764
No 197
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=95.42 E-value=0.33 Score=40.49 Aligned_cols=107 Identities=16% Similarity=0.114 Sum_probs=69.4
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~ 111 (165)
.+..+|.|....||++.+. +| .++||.-...... .-.......|.++|+.+.. |..++-.-.| +.....
T Consensus 14 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 14 DLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-----PVLAKRTYRELKLLKHLRH--ENIISLSDIFISPLEDIY 86 (328)
T ss_pred EEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-----cchhHHHHHHHHHHHhcCC--CCeeeEeeeEecCCCcEE
Confidence 5788999999999999876 55 8899965432211 0112455568888877753 5444433323 245677
Q ss_pred EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
++||+++. .+.+.+..+... ..++.+|...|+.+|...
T Consensus 87 lv~e~~~~---~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~ 128 (328)
T cd07856 87 FVTELLGT---DLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAG 128 (328)
T ss_pred EEeehhcc---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999972 466655544433 246778888898898765
No 198
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=95.41 E-value=0.28 Score=41.40 Aligned_cols=108 Identities=14% Similarity=0.113 Sum_probs=70.3
Q ss_pred eeEeccCCceeEEEEEEeC--CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCc
Q 045250 36 TIKEVGDGNLNFVYIVVGT--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~ 110 (165)
-++.+|.|....||++... ++ .+++|.-....-. -.-..++...|.++|+.+.. |..+ +++ +.+....
T Consensus 34 ~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--p~Iv-~~~~~~~~~~~~ 106 (340)
T PTZ00426 34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII----KQKQVDHVFSERKILNYINH--PFCV-NLYGSFKDESYL 106 (340)
T ss_pred EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh----hhhhHHHHHHHHHHHHhCCC--CCCc-ceEEEEEeCCEE
Confidence 4688999999999999754 22 6888864321100 01223566778888877752 4433 333 3355567
Q ss_pred eEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
.+||||++ ...|.+.+..+..++ .++.+|...|.-+|...
T Consensus 107 ~lv~Ey~~--~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 151 (340)
T PTZ00426 107 YLVLEFVI--GGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN 151 (340)
T ss_pred EEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 89999998 347777776655432 45678888888888754
No 199
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=95.40 E-value=0.2 Score=40.01 Aligned_cols=105 Identities=19% Similarity=0.158 Sum_probs=66.5
Q ss_pred eEeccCCceeEEEEEEeCC-------CeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250 37 IKEVGDGNLNFVYIVVGTS-------GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-------gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~ 107 (165)
++.+|.|....||++.... ..+++|.-..... .-...+...|.+.|+.+.. |. +.+++.+ +.
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~------~~~~~~~~~ei~~l~~l~h--~~-i~~~~~~~~~~ 80 (283)
T cd05048 10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE------PKVQQEFRQEAELMSDLQH--PN-IVCLLGVCTKE 80 (283)
T ss_pred hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC------HHHHHHHHHHHHHHHhcCC--cc-cceEEEEEcCC
Confidence 5678889889999998642 1577776542211 1112345567777766542 33 3444443 55
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCC-----------------C----HHHHHHHHHHHHHHHhcc
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIAGIK-----------------Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~g~~-----------------~----~~~a~~iG~~La~~h~~t 152 (165)
....++||+++ ..+|.+.+..... . -.++.++...|+.+|...
T Consensus 81 ~~~~~~~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~ 144 (283)
T cd05048 81 QPTCMLFEYLA--HGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH 144 (283)
T ss_pred CceEEEEecCC--CCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 66789999997 3467777765321 1 257889999999999764
No 200
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=95.40 E-value=0.39 Score=38.11 Aligned_cols=105 Identities=19% Similarity=0.078 Sum_probs=68.8
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~ 112 (165)
-...+|.|....||++...+ + .+++|.... .. ........|.++|+.+.. |..++-.-. .+.....+
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~------~~--~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~l 79 (263)
T cd05052 10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE------DT--MEVEEFLKEAAVMKEIKH--PNLVQLLGVCTREPPFYI 79 (263)
T ss_pred EeeecCCcccceEEEEEEecCCceEEEEEecC------Cc--hHHHHHHHHHHHHHhCCC--CChhheEEEEcCCCCcEE
Confidence 44678889888999988753 4 788886431 11 234566778888888743 544444322 34456679
Q ss_pred EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...|.+.+.... .. -.++.++...|+-+|...
T Consensus 80 v~e~~~--~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ 124 (263)
T cd05052 80 ITEFMT--YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 124 (263)
T ss_pred EEEeCC--CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 347777665422 22 135788899999999654
No 201
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=95.40 E-value=0.33 Score=38.48 Aligned_cols=106 Identities=17% Similarity=0.012 Sum_probs=67.8
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
-++.+|.|....||++.+. +| .+++|....... -.......|..+|+.+.. |..++-. .+.+.+...+
T Consensus 13 ~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-------~~~~~~~~e~~~l~~~~h--~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 13 LIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-------DDFSLIQQEIFMVKECKH--CNIVAYFGSYLSREKLWI 83 (267)
T ss_pred hhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-------chHHHHHHHHHHHHhcCC--CCeeeeeEEEEeCCEEEE
Confidence 5677898999999999875 44 688887643321 112345567777776533 3322211 2346677789
Q ss_pred EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
|||+++ ..+|.+.+.++.. . -.++.++...|.-+|...
T Consensus 84 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 126 (267)
T cd06646 84 CMEYCG--GGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG 126 (267)
T ss_pred EEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 3567666654332 2 246778888888888754
No 202
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=95.40 E-value=0.13 Score=42.59 Aligned_cols=107 Identities=16% Similarity=0.018 Sum_probs=67.5
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
-+..+|.|....||++.+. +| .+++|.-....... .-...+...|..+|+... ..++++++ +.+.+...
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~i~~~~~---~~~i~~~~~~~~~~~~~~ 77 (330)
T cd05601 5 VKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA----QETVSFFEEERDILSISN---SPWIPQLQYAFQDKDNLY 77 (330)
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCC---CCCCcceeeEEecCCeEE
Confidence 3577899999999999876 45 78888765322110 112344556666666543 23344443 33556678
Q ss_pred EEEecCCCCchHHHHHHHcC--CCCH----HHHHHHHHHHHHHHhc
Q 045250 112 IGMRYLEPPHIILRKGLIAG--IKYP----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g--~~~~----~~a~~iG~~La~~h~~ 151 (165)
+||||++ ...|.+.+.+. .... .++.+|...|.-+|..
T Consensus 78 lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 121 (330)
T cd05601 78 LVMEYQP--GGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM 121 (330)
T ss_pred EEECCCC--CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9999997 34677766553 2222 3567888888888864
No 203
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=95.40 E-value=0.24 Score=39.04 Aligned_cols=104 Identities=16% Similarity=-0.006 Sum_probs=67.1
Q ss_pred eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~v 113 (165)
.+.+|.|....||++.+.++ .+.+|.-...- .....+...|..+|+.+.. |. +.+++ ..+.+...++
T Consensus 11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD-------LLKQQDFQKEVQALKRLRH--KH-LISLFAVCSVGEPVYII 80 (261)
T ss_pred hhhhccCCCccEEEeEecCCCcEEEEeccccc-------hhhHHHHHHHHHHHhcCCC--cc-hhheeeeEecCCCeEEE
Confidence 45678888899999998766 78888743211 1123455566667766642 33 33333 3566778899
Q ss_pred EecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ..+|.+.+.+. ... ..++.+|...|.-+|...
T Consensus 81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 124 (261)
T cd05148 81 TELME--KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN 124 (261)
T ss_pred Eeecc--cCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 34777777652 211 347778888888888654
No 204
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=95.39 E-value=0.15 Score=40.66 Aligned_cols=103 Identities=16% Similarity=0.034 Sum_probs=63.4
Q ss_pred eccCCceeEEEEEEeCC---C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250 39 EVGDGNLNFVYIVVGTS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~ 112 (165)
++|.|....||++...+ + .+++|.-..-.. .-.......|..+|+.+.. |. +++++. .+.....+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~l 72 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS------VQEQMKFLEEAQPYRSLQH--SN-LLQCLGQCTEVTPYLL 72 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC------hHHHHHHHHHHHHHHhCCC--CC-EeeEEEEEcCCCCcEE
Confidence 57888888899997542 2 578885432110 1112345557777776643 43 444443 35566789
Q ss_pred EEecCCCCchHHHHHHHcCCC------C----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIK------Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~------~----~~~a~~iG~~La~~h~~t 152 (165)
||||++ ..+|++.+..... . -.++.++...|+-+|...
T Consensus 73 v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 120 (269)
T cd05087 73 VMEFCP--LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN 120 (269)
T ss_pred EEECCC--CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 3467776654221 1 146778888888888554
No 205
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=95.38 E-value=0.24 Score=41.50 Aligned_cols=106 Identities=18% Similarity=0.207 Sum_probs=66.9
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecC-ccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc------
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQAL-PYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------ 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~-p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------ 106 (165)
.++.+|.|....||++.+. +| .++||... ++.. .-...+...|..+|+.+.. |..++-+-.|-
T Consensus 20 ~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 20 NLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN------VTHAKRAYRELVLMKLVNH--KNIIGLLNVFTPQKSLE 91 (353)
T ss_pred EEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC------hhHHHHHHHHHHHHHhcCC--CCCcceeeeeccCCCcc
Confidence 4688999999999999876 45 89999643 1111 1123466678888877643 33333222221
Q ss_pred -CCCceEEEecCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHhcc
Q 045250 107 -RTMSLIGMRYLEPPHIILRKGLIAGI---KYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 -~e~~~~vMEdl~~~~~~lr~~l~~g~---~~~~~a~~iG~~La~~h~~t 152 (165)
.....+|||+++. .+.+.+...- ....++.++...|+.+|...
T Consensus 92 ~~~~~~lv~e~~~~---~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g 138 (353)
T cd07850 92 EFQDVYLVMELMDA---NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAG 138 (353)
T ss_pred ccCcEEEEEeccCC---CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1235799999982 4555554331 11346888999999999764
No 206
>PHA03212 serine/threonine kinase US3; Provisional
Probab=95.37 E-value=0.33 Score=41.92 Aligned_cols=98 Identities=12% Similarity=0.086 Sum_probs=67.2
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
-++.+|.|....||++.+. .+ .+++|... ..+...|+++|+.+.. |..+ +++ +.+.....
T Consensus 96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------------~~~~~~E~~il~~l~H--pnIv-~~~~~~~~~~~~~ 159 (391)
T PHA03212 96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------------RGGTATEAHILRAINH--PSII-QLKGTFTYNKFTC 159 (391)
T ss_pred EEEEEcCCCCeEEEEEEECCCCCEEEEechh-------------hhhhHHHHHHHHhCCC--CCCC-CEeEEEEECCeeE
Confidence 5678999999999999886 34 78888421 1355779999988753 4433 333 23456678
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
++||+++. .|...+...... -.++.+|...|+-+|...
T Consensus 160 lv~e~~~~---~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~ 202 (391)
T PHA03212 160 LILPRYKT---DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENR 202 (391)
T ss_pred EEEecCCC---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999972 455555443322 256788889999999754
No 207
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=95.37 E-value=0.33 Score=38.93 Aligned_cols=105 Identities=13% Similarity=0.029 Sum_probs=66.1
Q ss_pred ccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceEEEec
Q 045250 40 VGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFDRTMSLIGMRY 116 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~e~~~~vMEd 116 (165)
+|.|...-||++.+. +| .+++|.-.... ... .....+...|.++|+.+. .|..++-.. +-+.+...+||||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~-~~~---~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKR-LKK---RKGEQMALNEKKILEKVS--SRFIVSLAYAFETKDDLCLVMTL 74 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhh-hhh---hhhhHHHHHHHHHHHhCC--CCCEeeeeeEEecCCeEEEEEec
Confidence 466777889999765 45 78888654321 100 012234456888888876 355444432 2355678899999
Q ss_pred CCCCchHHHHHHHcCC--CCH-----HHHHHHHHHHHHHHhcc
Q 045250 117 LEPPHIILRKGLIAGI--KYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 l~~~~~~lr~~l~~g~--~~~-----~~a~~iG~~La~~h~~t 152 (165)
++ ...|++.+.+.. .++ .++.++...|.-+|...
T Consensus 75 ~~--~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ 115 (277)
T cd05577 75 MN--GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR 115 (277)
T ss_pred CC--CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 98 457887776533 222 35678888888888764
No 208
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=95.37 E-value=0.45 Score=38.33 Aligned_cols=109 Identities=16% Similarity=0.088 Sum_probs=68.8
Q ss_pred CCcc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--
Q 045250 32 FDDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-- 106 (165)
Q Consensus 32 ~~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-- 106 (165)
.+++ .+..++.|...-||++... ++ .+++|.-.+.- ...++...|...++.+... | .+++++.+-
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--------~~~~~~~~e~~~l~~l~~h-~-ni~~~~~~~~~ 90 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--------DVDEEIEAEYNILQSLPNH-P-NVVKFYGMFYK 90 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--------cHHHHHHHHHHHHHHhcCC-C-CeEEEEEEEEe
Confidence 3444 5567899999999999885 44 68888654221 1235666777777766432 3 445555432
Q ss_pred -----CCCceEEEecCCCCchHHHHHHH----cCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 107 -----RTMSLIGMRYLEPPHIILRKGLI----AGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 -----~e~~~~vMEdl~~~~~~lr~~l~----~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.....+||||++ ..+|++.+. .+... -.++.++...|..+|...
T Consensus 91 ~~~~~~~~~~lv~ey~~--~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 148 (291)
T cd06639 91 ADKLVGGQLWLVLELCN--GGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR 148 (291)
T ss_pred ccccCCCeeEEEEEECC--CCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 134789999998 346666543 23322 236778888888899754
No 209
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=95.36 E-value=0.062 Score=45.20 Aligned_cols=106 Identities=15% Similarity=0.145 Sum_probs=66.6
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
.++.||.|....||++... +| .++||.-..... .....+...|.++|+.+.. |. +.+++ +.+.....
T Consensus 78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~ 148 (353)
T PLN00034 78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE------DTVRRQICREIEILRDVNH--PN-VVKCHDMFDHNGEIQ 148 (353)
T ss_pred hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc------HHHHHHHHHHHHHHHhCCC--CC-cceeeeEeccCCeEE
Confidence 4567999999999999875 45 899997532211 1123466778888877642 33 33333 33445667
Q ss_pred EEEecCCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGI-KYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~-~~~~~a~~iG~~La~~h~~t 152 (165)
+||||+. .. .|+....... ....++.+|...|.-+|...
T Consensus 149 lv~e~~~-~~-~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 188 (353)
T PLN00034 149 VLLEFMD-GG-SLEGTHIADEQFLADVARQILSGIAYLHRRH 188 (353)
T ss_pred EEEecCC-CC-cccccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 8999998 33 4433221111 12368889999999999754
No 210
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=95.35 E-value=0.16 Score=43.31 Aligned_cols=83 Identities=17% Similarity=0.067 Sum_probs=53.8
Q ss_pred eEeccCCceeEEEEEEe------CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 045250 37 IKEVGDGNLNFVYIVVG------TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~ 107 (165)
.+.||.|....||++.. .++ .+.||.-.+.... -..++...|.++|+.+..+ | ++++++ +.+.
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~~Ei~il~~l~~H-p-nIv~l~~~~~~~ 111 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL------TEREALMSELKVLSYLGNH-I-NIVNLLGACTVG 111 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc------HHHHHHHHHHHHHHHhcCC-c-ceeeeeeeeccC
Confidence 46789999999999863 123 6888876543221 1235667788888877543 3 333443 3466
Q ss_pred CCceEEEecCCCCchHHHHHHH
Q 045250 108 TMSLIGMRYLEPPHIILRKGLI 129 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~ 129 (165)
+...+||||++ +.+|.+.+.
T Consensus 112 ~~~~lv~E~~~--~g~L~~~l~ 131 (375)
T cd05104 112 GPTLVITEYCC--YGDLLNFLR 131 (375)
T ss_pred Ccceeeehhcc--CCcHHHHHH
Confidence 77889999998 335555554
No 211
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=95.35 E-value=0.088 Score=41.56 Aligned_cols=104 Identities=18% Similarity=0.085 Sum_probs=68.1
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE-VYHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~e~~~~v 113 (165)
++.+|.|...-||++.+. ++ .+++|.-.... -.....+...|.+.|+... -|..++- -.+.+.....++
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~------~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~lv 77 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI------NEAIQKQILRELDILHKCN--SPYIVGFYGAFYNNGDISIC 77 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc------ChHHHHHHHHHHHHHHHCC--CCchhhhheeeecCCEEEEE
Confidence 345788888889999886 34 78888643221 1122345667777777665 2433221 134567888999
Q ss_pred EecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHh
Q 045250 114 MRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~ 150 (165)
||+++ ...|++.+... ..+ ..++.++...|+.+|.
T Consensus 78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~ 118 (265)
T cd06605 78 MEYMD--GGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE 118 (265)
T ss_pred EEecC--CCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 99998 45787777654 222 2577888899999997
No 212
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=95.35 E-value=0.27 Score=40.77 Aligned_cols=106 Identities=12% Similarity=0.057 Sum_probs=63.0
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHH-HHHhhccCCCCCceE-EEEcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALA-LKEHGKLCPDHVPEV-YHFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~-L~~~~~~~p~~vP~v-~~~D~e~~~~vM 114 (165)
.||.|....||++... +| .+.||.-....... .-...+...|... ++... -|..++-. .+.+.+...+||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~~l~~~~--hp~iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN----RKEQKHIMAERNVLLKNVK--HPFLVGLHYSFQTTEKLYFVL 75 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHHhCC--CCCCccEEEEEecCCEEEEEE
Confidence 4788889999999875 45 78889765432211 0112233344433 22221 14333332 233567788999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||++ + ..|...+..+... -.++.+|...|+-+|...
T Consensus 76 e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~g 116 (325)
T cd05604 76 DFVN-G-GELFFHLQRERSFPEPRARFYAAEIASALGYLHSIN 116 (325)
T ss_pred cCCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 3 4566666554432 246778899999999755
No 213
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=95.34 E-value=0.41 Score=37.63 Aligned_cols=105 Identities=16% Similarity=0.101 Sum_probs=68.3
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
.+.+|.|...-||++.+. ++ .+++|.-.-.. -.-..++...|...|+.+.. |. +++++ +.+.....+
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~------~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~l 75 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK------SSSAVEDSRKEAVLLAKMKH--PN-IVAFKESFEADGHLYI 75 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc------chHHHHHHHHHHHHHHhCCC--CC-cceEEEEEEECCEEEE
Confidence 567899999999999876 34 78888743111 01234677778888876643 33 33333 346677889
Q ss_pred EEecCCCCchHHHHHHHc--CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIA--GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~--g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||++ +..+.+.+.. +..+ -.++.+|...|..+|...
T Consensus 76 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 120 (255)
T cd08219 76 VMEYCD--GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR 120 (255)
T ss_pred EEeeCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 999998 3456665543 2222 246788899999998753
No 214
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=95.32 E-value=0.29 Score=40.60 Aligned_cols=106 Identities=12% Similarity=0.030 Sum_probs=62.5
Q ss_pred ccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhc-cCCCCCceEEE--EcCCCceEEE
Q 045250 40 VGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGK-LCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~-~~p~~vP~v~~--~D~e~~~~vM 114 (165)
||.|...-||++.+. +| .++||......-. . .-...+...|..+++...- -.|. ++.++. .+.....+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~---~~~~~~~~~e~~~l~~~~~~~~p~-i~~~~~~~~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-A---KKEVAHTIGERNILVRTLLDESPF-IVGLKFSFQTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh-h---hhHHHHHHHHHHHHHHhccCCCCc-CcceEEEEecCCeEEEEE
Confidence 567888889999876 45 7888875321100 0 0122344456666554431 1233 333332 3566789999
Q ss_pred ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
||++ + ..|...+.....+ . .++.+|...|+-+|...
T Consensus 76 e~~~-~-g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ 116 (330)
T cd05586 76 DYMS-G-GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYD 116 (330)
T ss_pred cCCC-C-ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 3 3566666554432 2 45678888888888754
No 215
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=95.32 E-value=0.18 Score=42.33 Aligned_cols=107 Identities=17% Similarity=0.156 Sum_probs=65.6
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------ 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------ 107 (165)
.++.||.|....||++.+. .| .++||.-..-... .-...+...|..+|+.+.. |..++-.-.|..
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 25 QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN-----QTHAKRAYRELVLLKCVNH--KNIISLLNVFTPQKSLEE 97 (359)
T ss_pred EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc-----hhHHHHHHHHHHHHHhCCC--CCEeeeeeeeccCCCccc
Confidence 4688999999999999875 45 7999975321110 1223566678887776642 332222222222
Q ss_pred -CCceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcc
Q 045250 108 -TMSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 -e~~~~vMEdl~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~t 152 (165)
....+|||+++. .+.+.+...-. ...++.+|...|+-+|...
T Consensus 98 ~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 143 (359)
T cd07876 98 FQDVYLVMELMDA---NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG 143 (359)
T ss_pred cceeEEEEeCCCc---CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 234799999983 34444432211 1357788999999999864
No 216
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=95.30 E-value=0.2 Score=41.44 Aligned_cols=106 Identities=9% Similarity=-0.022 Sum_probs=64.1
Q ss_pred EeccCC--ceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 38 KEVGDG--NLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 38 ~~l~~G--n~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
..||.| ....||++... +| .++||.-..-.. ..-..+....|.++|+.+.. |..++-. ++.+.+...+
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--pniv~~~~~~~~~~~~~l 76 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-----TNEMVTFLQGELHVSKLFNH--PNIVPYRATFIADNELWV 76 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhc-----cHHHHHHHHHHHHHHHhcCC--CCeeeEEEEEEECCEEEE
Confidence 456777 45678898775 55 788897432110 00112334457777776532 4443322 3456677889
Q ss_pred EEecCCCCchHHHHHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAG--I-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g--~-~~----~~~a~~iG~~La~~h~~t 152 (165)
||||++ +..+++.+... . .. -.++.+|...|+-+|...
T Consensus 77 v~e~~~--~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 121 (327)
T cd08227 77 VTSFMA--YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG 121 (327)
T ss_pred EEeccC--CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 45777766432 2 22 247788888999998654
No 217
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=95.30 E-value=0.35 Score=38.74 Aligned_cols=106 Identities=14% Similarity=0.067 Sum_probs=65.3
Q ss_pred eeEeccCCceeEEEEEEeC-CC-e----EEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCC
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-S----FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-s----vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e 108 (165)
.++.+|.|....||++... +| . +.+|.-..... .-...+...|...++.+. ..+++.++.+ ...
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~ 81 (279)
T cd05109 11 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS------PKANKEILDEAYVMAGVG---SPYVCRLLGICLTS 81 (279)
T ss_pred eeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC------HHHHHHHHHHHHHHHhcC---CCCCceEEEEEcCC
Confidence 5788999999999999753 44 2 55666542211 111234445555555443 2344444433 345
Q ss_pred CceEEEecCCCCchHHHHHHHcCCC-C-----HHHHHHHHHHHHHHHhcc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGIK-Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~~-~-----~~~a~~iG~~La~~h~~t 152 (165)
...++||+++ ...+.+.+.++.. + -.++.+|...|+-+|...
T Consensus 82 ~~~l~~~~~~--~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 129 (279)
T cd05109 82 TVQLVTQLMP--YGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR 129 (279)
T ss_pred CcEEEEEcCC--CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5678999998 3467777765432 2 257888999999999765
No 218
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=95.30 E-value=0.5 Score=37.54 Aligned_cols=106 Identities=13% Similarity=-0.005 Sum_probs=67.0
Q ss_pred eeEeccCCceeEEEEEEeCC-C----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e 108 (165)
-.+.+|.|....||++.... | .+.||....... .-...+...|..+|+.+.. |. +.+++. .+.+
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~n-i~~~~~~~~~~~ 78 (269)
T cd05065 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT------EKQRRDFLSEASIMGQFDH--PN-IIHLEGVVTKSR 78 (269)
T ss_pred EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC------HHHHHHHHHHHHHHHhCCC--cC-cceEEEEECCCC
Confidence 35678999999999998752 2 488888653211 0112456667777776632 43 333433 3556
Q ss_pred CceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
...+|||+++ ...|.+.+..+. .. -.++.++...|+-+|...
T Consensus 79 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g 126 (269)
T cd05065 79 PVMIITEFME--NGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN 126 (269)
T ss_pred ceEEEEecCC--CCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 6688999998 346777765432 22 245677788888888654
No 219
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=95.29 E-value=0.52 Score=35.69 Aligned_cols=105 Identities=19% Similarity=0.079 Sum_probs=69.6
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
.+.++.|...-||++...+ + .+++|....... + -...+...|.+.++.+.. |..++-+ +..+.....++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~-~~~~~~~~e~~~~~~~~~--~~i~~~~~~~~~~~~~~~v 75 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKT-----E-KQREEFLREIRILKKLKH--PNIVKLYGVFEDPEPLYLV 75 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccc-----h-HHHHHHHHHHHHHHhCCC--CChhhheeeeecCCceEEE
Confidence 4678888888999999875 4 899998663221 1 134577778888877732 4333322 22344778899
Q ss_pred EecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhc
Q 045250 114 MRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~ 151 (165)
||+++ ..+|.+.+..... . ..++.++...|+.+|..
T Consensus 76 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 117 (225)
T smart00221 76 MEYCE--GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL 117 (225)
T ss_pred EeccC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99998 3477776655332 1 35677788888888876
No 220
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=95.27 E-value=0.36 Score=38.34 Aligned_cols=103 Identities=15% Similarity=0.087 Sum_probs=64.4
Q ss_pred eccCCceeEEEEEEeCCC----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 39 EVGDGNLNFVYIVVGTSG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
++|.|...-||++...++ .+++|+...... . -...+...|.+.++.+.. |. +.+++ ..+.....+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~---~---~~~~~~~~e~~~~~~l~h--~n-ii~~~~~~~~~~~~~l 72 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT---P---DEQLLFLQEVQPYRELNH--PN-VLQCLGQCIESIPYLL 72 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCC---h---HHHHHHHHHHHHHHhCCC--CC-cceEEEEECCCCceEE
Confidence 588999999999865432 678887542211 0 112334556666665432 33 44444 345677899
Q ss_pred EEecCCCCchHHHHHHHcCCC------C----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIK------Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~------~----~~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...|++.+..... . -.++.+|...|+-+|...
T Consensus 73 v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (269)
T cd05042 73 VLEFCP--LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD 120 (269)
T ss_pred EEEeCC--CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 999997 4577777765321 1 256778888889899765
No 221
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=95.27 E-value=0.2 Score=42.55 Aligned_cols=108 Identities=15% Similarity=0.049 Sum_probs=68.4
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
.++.||.|....||++.+. ++ .+.||.-...--. ..-...+...|.++|+.+.. |. +++++ +.+.+...
T Consensus 5 ~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~~E~~il~~~~h--~~-iv~~~~~~~~~~~~~ 77 (382)
T cd05625 5 KIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL----LRNQVAHVKAERDILAEADN--EW-VVRLYYSFQDKDNLY 77 (382)
T ss_pred EEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh----hHHHHHHHHHHHHHHHhCCC--Cc-CCeEEEEEEeCCEEE
Confidence 5788999999999999875 34 6888865421100 01112456678778876643 33 33333 34566789
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
+||||++ + ..|.+.+.+...+ . .++.+|...|.-+|...
T Consensus 78 lv~E~~~-g-g~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ 121 (382)
T cd05625 78 FVMDYIP-G-GDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG 121 (382)
T ss_pred EEEeCCC-C-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 3 3666666554433 2 34567778888888754
No 222
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=95.26 E-value=0.45 Score=36.96 Aligned_cols=107 Identities=18% Similarity=0.017 Sum_probs=70.9
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
.+.+|.|...-||++.+. ++ .+++|.-...... .-..++...|.++|+.+.. |..++-. ++.+.....++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v 77 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-----EEALKSIMQEIDLLKNLKH--PNIVKYIGSIETSDSLYII 77 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-----HHHHHHHHHHHHHHHhCCC--CCccEEEEEEEeCCEEEEE
Confidence 467899999999999876 34 7888877643210 1234566777778777642 4433322 34556677899
Q ss_pred EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|.+.+..... . -.++.++...|+-+|...
T Consensus 78 ~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 119 (254)
T cd06627 78 LEYAE--NGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG 119 (254)
T ss_pred EecCC--CCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 99997 3588777765332 2 256778888888888654
No 223
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.25 E-value=0.34 Score=39.46 Aligned_cols=108 Identities=14% Similarity=-0.013 Sum_probs=70.1
Q ss_pred eeEeccCCceeEEEEEEeC--------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-E
Q 045250 36 TIKEVGDGNLNFVYIVVGT--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-F 105 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~ 105 (165)
-.+++|.|....||++... ++ .+++|........ -...+...|..+|+.+... |..++-+-. .
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~------~~~~~~~~E~~~l~~l~~h-~~i~~~~~~~~ 91 (304)
T cd05101 19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATE------KDLSDLVSEMEMMKMIGKH-KNIINLLGACT 91 (304)
T ss_pred ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccch------HHHHHHHHHHHHHHhhccC-CCchheeEEEe
Confidence 3478999999999988631 22 6888876543211 1235677888888877554 544443322 2
Q ss_pred cCCCceEEEecCCCCchHHHHHHHcCCC---------------------CHHHHHHHHHHHHHHHhcc
Q 045250 106 DRTMSLIGMRYLEPPHIILRKGLIAGIK---------------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~---------------------~~~~a~~iG~~La~~h~~t 152 (165)
+.....++||+++ ..+|++.+.+... .-.++.+|...|+-+|...
T Consensus 92 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g 157 (304)
T cd05101 92 QDGPLYVIVEYAS--KGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK 157 (304)
T ss_pred cCCceEEEEecCC--CCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 4445669999998 3478777765321 1245778999999999764
No 224
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=95.23 E-value=0.2 Score=41.68 Aligned_cols=105 Identities=16% Similarity=0.163 Sum_probs=68.5
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE------cCC
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF------DRT 108 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~------D~e 108 (165)
.+.+|.|....||++.+. +| .+++|.-.... .-.-...+...|..+|+.+.. |. +++++.+ +..
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~-----~~~~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF-----DVPTLAKRTLRELKILRHFKH--DN-IIAIRDILRPPGADFK 81 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEecccc-----ccccchHHHHHHHHHHHhcCC--CC-ccCHHHhccccCCCCc
Confidence 467899999999999876 45 88888643211 111234566678888888762 33 3332221 334
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...+|||+++ + .+.+.+..+... -.++.+|...|+-+|...
T Consensus 82 ~~~lv~e~~~-~--~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 127 (334)
T cd07855 82 DVYVVMDLME-S--DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSAN 127 (334)
T ss_pred eEEEEEehhh-h--hHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5679999997 3 677777655432 257778888999999765
No 225
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=95.23 E-value=0.31 Score=38.89 Aligned_cols=104 Identities=17% Similarity=0.090 Sum_probs=65.7
Q ss_pred eccCCceeEEEEEEeCC-C---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250 39 EVGDGNLNFVYIVVGTS-G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~-g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~ 112 (165)
.+|.|....||++.+.+ | .+.+|.-..... .-...+...|.+.|+.+... |..+ +++. .+.....+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~iv-~~~~~~~~~~~~~l 73 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------KDDHRDFAGELEVLCKLGHH-PNII-NLLGACEHRGYLYL 73 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC------HHHHHHHHHHHHHHHhhccC-CCee-eEEEEEecCCCceE
Confidence 47888888999998753 3 356666543321 12235677788888877553 4433 3432 23345679
Q ss_pred EEecCCCCchHHHHHHHcCCC----------------C-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIK----------------Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~----------------~-----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ + .+|.+.+.+... . -.++.++...|+-+|...
T Consensus 74 v~e~~~-~-~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ 132 (270)
T cd05047 74 AIEYAP-H-GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ 132 (270)
T ss_pred EEEeCC-C-CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 3 477777765321 1 246778888899899753
No 226
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=95.19 E-value=0.61 Score=36.82 Aligned_cols=110 Identities=15% Similarity=0.054 Sum_probs=66.4
Q ss_pred EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCC-CC-CCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250 38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGE-SW-PMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~-~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~ 111 (165)
..+|.|..+-||++.+. ++ .+++|.-......... .+ .--.++...|..+|+.+.. | .+++++. .+.+...
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~ 82 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH--E-NIVQYLGSSLDADHLN 82 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC--C-CeeeEEEEEEeCCccE
Confidence 46788889999999875 34 7888865432211000 00 0011344566667766642 3 3444443 3667888
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
++||+++ ...|.+.+...... -.++.++...|..+|...
T Consensus 83 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ 126 (267)
T cd06628 83 IFLEYVP--GGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRG 126 (267)
T ss_pred EEEEecC--CCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999997 34677766553322 256788888888888543
No 227
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=95.18 E-value=0.53 Score=37.41 Aligned_cols=105 Identities=14% Similarity=-0.007 Sum_probs=65.4
Q ss_pred eEeccCCceeEEEEEEeC--C--C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 045250 37 IKEVGDGNLNFVYIVVGT--S--G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~--~--g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~ 109 (165)
.+.+|.|....||++... + + .+++|...+.... -...+...|..+|+.+.. |. +++++. .+.+.
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~ 79 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE------KQRRDFLSEASIMGQFDH--PN-IIHLEGVVTKSKP 79 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCH------HHHHHHHHHHHHHHhCCC--CC-cceEEEEEecCCc
Confidence 567899999999998763 1 2 5888876532210 112345556667766532 43 333333 25566
Q ss_pred ceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
..+|||+++ ..+|.+.+... ... -.++.++...|+.+|...
T Consensus 80 ~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 126 (267)
T cd05066 80 VMIVTEYME--NGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG 126 (267)
T ss_pred cEEEEEcCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 778999998 34777776553 222 246678888888898653
No 228
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=95.17 E-value=0.58 Score=38.20 Aligned_cols=106 Identities=18% Similarity=0.138 Sum_probs=69.3
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
.++.+|.|....||++.+. +| .+++|+-.. ...-..++...|.+.++.+.. |..++-+ ++.+.+...+
T Consensus 23 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~-------~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~l 93 (296)
T cd06655 23 RYEKIGQGASGTVFTAIDVATGQEVAIKQINL-------QKQPKKELIINEILVMKELKN--PNIVNFLDSFLVGDELFV 93 (296)
T ss_pred EEEEEecCCCeEEEEEEEcCCCcEEEEEEEec-------ccCchHHHHHHHHHHHHhcCC--CceeeeeeeEecCceEEE
Confidence 5678999999999999864 45 899996531 111234566778887776642 4333222 3446778889
Q ss_pred EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...|...+..+.... .++.++...|+.+|...
T Consensus 94 v~e~~~--~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~ 135 (296)
T cd06655 94 VMEYLA--GGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQ 135 (296)
T ss_pred EEEecC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 346776665544332 45567778888888554
No 229
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=95.17 E-value=0.3 Score=37.57 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=69.4
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
...++.|....||++.+. ++ .+++|.-..... -...+...|.+.|+.+. ...+++++ +.+.....+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~l 74 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-------EKKEKIINEIQILKKCK---HPNIVKYYGSYLKKDELWI 74 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHHHHhCC---CCCEeEEEEEEecCCeEEE
Confidence 467888888899999986 45 788887753221 12356667777777665 23344444 345577889
Q ss_pred EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 045250 113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~ 151 (165)
+||+++ ...|.+.+... ... -.++.++...|+.+|..
T Consensus 75 ~~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~ 117 (253)
T cd05122 75 VMEFCS--GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN 117 (253)
T ss_pred EEecCC--CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC
Confidence 999998 45777776654 222 24677888888888873
No 230
>KOG3021 consensus Predicted kinase [General function prediction only]
Probab=95.15 E-value=0.08 Score=44.01 Aligned_cols=88 Identities=18% Similarity=0.100 Sum_probs=57.5
Q ss_pred cCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHH--HHHHhhccCCCCCceEEEEc---CCCceEEEe
Q 045250 41 GDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEAL--ALKEHGKLCPDHVPEVYHFD---RTMSLIGMR 115 (165)
Q Consensus 41 ~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~--~L~~~~~~~p~~vP~v~~~D---~e~~~~vME 115 (165)
|||-+|.-=.-+++.|+|.||.-+. ..|..+|-+ -|+++.+.--..||+.+..= --.+.+|||
T Consensus 21 gggcI~~~r~ydtDaG~~FvK~nr~------------~~~~mfeGE~~sLeAi~sT~tv~vprpikvid~p~Ggs~lime 88 (313)
T KOG3021|consen 21 GGGCISDGRHYDTDAGKVFVKVNRS------------IARDMFEGELASLEAIQSTETVLVPRPIKVIDLPGGGSSLIME 88 (313)
T ss_pred CCceeccccccccCCccEEEEeccc------------cchHHHhhHHHHHHHHHhcCceecCCceeeEecCCCceeeeee
Confidence 4555554322333456999997653 134455544 57777775445666655432 357899999
Q ss_pred cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
++. +..||. -++.+|+.||.+|...
T Consensus 89 ~id--f~~lr~----------~~a~lG~qlAdmHl~n 113 (313)
T KOG3021|consen 89 HID--FQGLRS----------DAAKLGSQLADMHLKN 113 (313)
T ss_pred hhh--cccchh----------HHHHHHHHHHHHhhhh
Confidence 996 766765 4788999999999665
No 231
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=95.15 E-value=0.4 Score=38.64 Aligned_cols=107 Identities=11% Similarity=-0.050 Sum_probs=62.5
Q ss_pred ccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEEe
Q 045250 40 VGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGMR 115 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vME 115 (165)
+|.|...-||++.+. +| .+.+|.-..... ...-...+...|...++......-..++..+. .+.+...+|||
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 77 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRI----KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD 77 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeecccc----ccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEe
Confidence 677888899999875 35 788897654211 01111223445555665554422123333332 25567789999
Q ss_pred cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|++ +..|.+.+...... -.++.++...|.-+|...
T Consensus 78 ~~~--g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ 117 (278)
T cd05606 78 LMN--GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF 117 (278)
T ss_pred cCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 998 34676666554332 246667777888888543
No 232
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=95.13 E-value=0.34 Score=39.23 Aligned_cols=109 Identities=12% Similarity=0.017 Sum_probs=67.5
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~ 112 (165)
.++.||.|....||++... +| .+.||.-....... .-...+...|..+|+.+.. |..++-... .+.+...+
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~~--~~iv~~~~~~~~~~~~~l 77 (285)
T cd05631 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----RKGEAMALNEKRILEKVNS--RFVVSLAYAYETKDALCL 77 (285)
T ss_pred EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh----hhhHHHHHHHHHHHHhcCC--CcEEEEEEEEccCCeEEE
Confidence 3577999999999999875 45 78888754321100 0112345568888877643 333333322 35567789
Q ss_pred EEecCCCCchHHHHHHHc-C-CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIA-G-IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~-g-~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...|.+.+.. + ..+ -.++.++...|+-+|...
T Consensus 78 v~e~~~--~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (285)
T cd05631 78 VLTIMN--GGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER 122 (285)
T ss_pred EEEecC--CCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 3456555543 1 112 246778888888898753
No 233
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=95.12 E-value=0.21 Score=40.36 Aligned_cols=107 Identities=19% Similarity=0.078 Sum_probs=68.3
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC--Cc
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRT--MS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e--~~ 110 (165)
.++.+|.|..-.||++.+.. + .+++|....... .-..++...|.+.|+.+.. |..++-.-. .+.+ ..
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~ 76 (287)
T cd06621 5 ELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN------PDLQKQILRELEINKSCKS--PYIVKYYGAFLDESSSSI 76 (287)
T ss_pred EEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc------hHHHHHHHHHHHHHHhCCC--CCeeeeeeEEEccCCCeE
Confidence 56788999999999999863 4 788886543211 1234667788888877642 444443222 2333 46
Q ss_pred eEEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+||||++. ..|.+.+.. +... -.++.+|...|+.+|...
T Consensus 77 ~lv~e~~~~--~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~ 125 (287)
T cd06621 77 GIAMEYCEG--GSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK 125 (287)
T ss_pred EEEEEecCC--CCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 799999983 355544321 2222 258889999999999654
No 234
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=95.12 E-value=0.11 Score=41.23 Aligned_cols=111 Identities=14% Similarity=0.089 Sum_probs=65.8
Q ss_pred eEeccCCceeEEEEEEeCC--C-eEEEEecCcccccc---CCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCC
Q 045250 37 IKEVGDGNLNFVYIVVGTS--G-SFVIKQALPYVRCI---GESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTM 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~--g-svIvKqa~p~~r~~---~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~ 109 (165)
...+|.|....||++.+.. + .++||+-....... ...+.....+...|...++..-.. |..++-+ ++.+...
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h-~~i~~~~~~~~~~~~ 83 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRH-PNIVRYYKTFLENDR 83 (269)
T ss_pred hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCC-CCeeeEEeeEccCCe
Confidence 4568899999999999865 3 78889876443211 123344455566666666543222 3322222 2446677
Q ss_pred ceEEEecCCCCchHHHHHHH----cCCCC-----HHHHHHHHHHHHHHHh
Q 045250 110 SLIGMRYLEPPHIILRKGLI----AGIKY-----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~----~g~~~-----~~~a~~iG~~La~~h~ 150 (165)
..++|||++ +..+.+.+. .+..+ -.++.++...|+-+|.
T Consensus 84 ~~lv~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 131 (269)
T cd08528 84 LYIVMDLIE--GAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK 131 (269)
T ss_pred EEEEEecCC--CCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 889999997 234444432 22222 2466678888888884
No 235
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=95.11 E-value=0.15 Score=40.76 Aligned_cols=105 Identities=19% Similarity=0.184 Sum_probs=70.9
Q ss_pred eEeccCCceeEEEEEEeC-----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CC
Q 045250 37 IKEVGDGNLNFVYIVVGT-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RT 108 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e 108 (165)
...||.|..--|||+... .+ .|+||...+.... -..+....|.+.|+.+ +. | ++.+++.+- .+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~------~~~~~~~~e~~~l~~l-~h-~-ni~~~~g~~~~~~ 74 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSE------EEEEEFLNEIQILRKL-RH-P-NIVKLYGFCIENE 74 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSH------HHHHHHHHHHHHHHTH-SB-T-TBE-EEEEEESSS
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccc------ccceeeeecccccccc-cc-c-ccccccccccccc
Confidence 467899999999999887 12 7999998653321 1146777788777776 32 3 344454443 45
Q ss_pred CceEEEecCCCCchHHHHHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAG--I-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g--~-~~----~~~a~~iG~~La~~h~~t 152 (165)
...+|||+++ ...|++.|... . .. -.++.+|+..|+-+|...
T Consensus 75 ~~~lv~e~~~--~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~ 123 (259)
T PF07714_consen 75 PLFLVMEYCP--GGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN 123 (259)
T ss_dssp SEEEEEE--T--TEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccc--ccccccccccccccccccccccccccccccccccccccc
Confidence 6799999998 44888888876 2 22 257888999999998754
No 236
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=95.09 E-value=0.26 Score=47.90 Aligned_cols=108 Identities=20% Similarity=0.241 Sum_probs=71.8
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~ 111 (165)
-++.+|.|....||++.+. +| .+.||.-..... +......|...|.++++.+.. |..++ ++. .+.+...
T Consensus 6 Ii~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~----~~e~~~~rflrEi~ILs~L~H--PNIVk-l~~v~~d~~~ly 78 (932)
T PRK13184 6 IIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS----ENPLLKKRFLREAKIAADLIH--PGIVP-VYSICSDGDPVY 78 (932)
T ss_pred EEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc----cCHHHHHHHHHHHHHHHhCCC--cCcCe-EEEEEeeCCEEE
Confidence 3578999999999999876 35 799998653221 122334577788888877642 44443 443 3556678
Q ss_pred EEEecCCCCchHHHHHHHcC----C--------C----CHHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAG----I--------K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g----~--------~----~~~~a~~iG~~La~~h~~t 152 (165)
++|||++ +.+|++.+... . . .-.++.+|...|+.+|...
T Consensus 79 LVMEY~e--GGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G 133 (932)
T PRK13184 79 YTMPYIE--GYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG 133 (932)
T ss_pred EEEEcCC--CCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 34677666431 0 0 1246789999999999754
No 237
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=95.05 E-value=0.45 Score=37.53 Aligned_cols=105 Identities=17% Similarity=0.034 Sum_probs=67.3
Q ss_pred ccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 045250 40 VGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMRY 116 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vMEd 116 (165)
+|.|....||++.+.. + .+++|.-....-. .. -...+...|...|+.+.. |..++-+ .+.|.....++|||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~---~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~ 74 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV-ET---GQQEHIFSEKEILEECNH--PFIVKLYRTFKDKKYIYMLMEY 74 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcch-hh---hHHHHHHHHHHHHHhCCC--CCEeeeeeeEEcCCccEEEEec
Confidence 4667778899999873 4 8999976532211 01 123567778887776642 4433322 34577888999999
Q ss_pred CCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250 117 LEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 117 l~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
.+ ...|.+.+......+ .++.+|...|+-+|...
T Consensus 75 ~~--~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 113 (262)
T cd05572 75 CL--GGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRG 113 (262)
T ss_pred CC--CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 97 458888776654332 35567778888888643
No 238
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=95.04 E-value=0.34 Score=38.00 Aligned_cols=107 Identities=19% Similarity=0.109 Sum_probs=65.2
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CC-CceE
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-RT-MSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~e-~~~~ 112 (165)
++.+|.|...-||++.+.. + .+++|.-...... .-..++...|.+.++.+.. |..++-...+. .+ ...+
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~l 77 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-----RRERKAAEQEAQLLSQLKH--PNIVAYRESWEGEDGLLYI 77 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-----HHHHHHHHHHHHHHHhCCC--CCeeeeeeeecCCCCEEEE
Confidence 4678888888999998864 3 7888885321110 0112345567677766643 44444333333 23 2469
Q ss_pred EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ..+|.+.+.+. ... -.++.++...|+.+|...
T Consensus 78 v~e~~~--~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ 122 (257)
T cd08223 78 VMGFCE--GGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH 122 (257)
T ss_pred EecccC--CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 34666666542 212 256778888888898754
No 239
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=95.01 E-value=0.18 Score=40.23 Aligned_cols=106 Identities=17% Similarity=0.146 Sum_probs=67.1
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCC-ceEEEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHV-PEVYHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v-P~v~~~D~e~~~~v 113 (165)
.+.||.|....||++...+ + .++||+-..... .....+...|...++.+... |..+ ..-++.+.+...+|
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~e~~~l~~~~~h-~~i~~~~~~~~~~~~~~lv 76 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY------SWEECMNLREVKSLRKLNEH-PNIVKLKEVFRENDELYFV 76 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhcc------chhHHHHHHHHHHHHhccCC-CCchhHHHHhhcCCcEEEE
Confidence 3568888889999999863 4 788997543221 12223344577777766533 2211 22234567888999
Q ss_pred EecCCCCchHHHHHHHcCC--C-C----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGI--K-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~--~-~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ . ++++.+.... . . ..++.++...|..+|...
T Consensus 77 ~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~ 119 (283)
T cd07830 77 FEYME--G-NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG 119 (283)
T ss_pred EecCC--C-CHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99995 2 5666665543 2 1 357778888888888765
No 240
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=95.01 E-value=0.62 Score=36.51 Aligned_cols=106 Identities=20% Similarity=0.053 Sum_probs=68.2
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
.++.++.|....||++.... + .+++|.-.... . -.......|.++|+.+.. |..++-. ++.+.....+
T Consensus 7 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~---~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~l 77 (262)
T cd06613 7 LIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP----G---DDFEIIQQEISMLKECRH--PNIVAYFGSYLRRDKLWI 77 (262)
T ss_pred EEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc----h---hhHHHHHHHHHHHHhCCC--CChhceEEEEEeCCEEEE
Confidence 45778999999999998753 3 67777654211 1 134566677777776643 4433322 2346677789
Q ss_pred EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...+.+.+... ... -.++.++...|+-+|...
T Consensus 78 ~~e~~~--~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~ 121 (262)
T cd06613 78 VMEYCG--GGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG 121 (262)
T ss_pred EEeCCC--CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 35666666543 222 246777888888888654
No 241
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=95.01 E-value=0.27 Score=40.75 Aligned_cols=106 Identities=9% Similarity=0.015 Sum_probs=61.7
Q ss_pred eccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~vM 114 (165)
.||.|....||++.+.. + .+++|.-....... .-...+...|...+. ..+...++++++ +.+.+...+||
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~~l--~~~~h~~Iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILK----KKEEKHIMSERNVLL--KNVKHPFLVGLHFSFQTADKLYFVL 75 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHh----hhHHHHHHHHHHHHH--HhCCCCCCCceeEEEEcCCeEEEEE
Confidence 57888899999998763 4 68888754321100 011122333333221 122222334443 34567778999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|+++ +..|.+.+.....+ ..++.+|...|.-+|...
T Consensus 76 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~g 116 (325)
T cd05602 76 DYIN--GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 116 (325)
T ss_pred eCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 34676766654432 236778888999999754
No 242
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=95.00 E-value=0.46 Score=39.49 Aligned_cols=105 Identities=13% Similarity=0.116 Sum_probs=67.2
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------c
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-------D 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------D 106 (165)
-.+.+|.|....||++.+. +| .++||+-.+.-. .....|...|..+|+.+.. |..++ ++.+ +
T Consensus 9 i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~niv~-~~~~~~~~~~~~ 79 (336)
T cd07849 9 NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH------QTFCQRTLREIKILRRFKH--ENIIG-ILDIIRPPSFES 79 (336)
T ss_pred EEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc------chhHHHHHHHHHHHHhCCC--CCcCc-hhheeecccccc
Confidence 3567899999999999865 45 899998754321 1223567778888887762 43322 2211 1
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
.....++||+++. .+.+.+..+.... .++.+|...|+.+|...
T Consensus 80 ~~~~~lv~e~~~~---~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ 126 (336)
T cd07849 80 FNDVYIVQELMET---DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSAN 126 (336)
T ss_pred cceEEEEehhccc---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1234789999983 4555555444332 46677888888898765
No 243
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=95.00 E-value=0.26 Score=39.01 Aligned_cols=107 Identities=12% Similarity=0.024 Sum_probs=70.1
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
.+.+|.|....||++.+. +| .+++|.-..- +.. .-.......|.++++.+.. ...+++++ +.+.+...
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~~e~~~~~~l~~--~~~i~~~~~~~~~~~~~~ 78 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIK-----EKKVKYVKIEKEVLTRLNG--HPGIIKLYYTFQDEENLY 78 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccc-----hHHHHHHHHHHHHHHhccc--CCCchhHHHHhcCCceEE
Confidence 457899999999999886 45 7888875431 110 0112456677777776652 22344444 34667888
Q ss_pred EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
++||+++ ..+|++.+.+...+ ..++.++...|+.+|...
T Consensus 79 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~ 122 (280)
T cd05581 79 FVLEYAP--NGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG 122 (280)
T ss_pred EEEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999997 35788877765332 256777888888888654
No 244
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=94.99 E-value=0.58 Score=36.72 Aligned_cols=108 Identities=16% Similarity=0.099 Sum_probs=67.6
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
.++.+|.|....||.+.+. ++ .+++|-....... + -...+...|.++|+.+.. |..+|-. ++.+.....+
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~--~---~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~ 76 (256)
T cd08221 4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS--E---KERRDALNEIVILSLLQH--PNIIAYYNHFMDDNTLLI 76 (256)
T ss_pred EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc--h---hHHHHHHHHHHHHHhCCC--CCeeEEEeEEecCCeEEE
Confidence 3577888888877777665 34 7888875321110 1 123456678888887742 4433333 3556677788
Q ss_pred EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ +..|.+.+.+. ..+ -.++.++...|+-+|...
T Consensus 77 ~~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (256)
T cd08221 77 EMEYAN--GGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG 121 (256)
T ss_pred EEEecC--CCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 899998 45677766553 111 245677888888888643
No 245
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=94.99 E-value=0.45 Score=37.94 Aligned_cols=106 Identities=15% Similarity=0.068 Sum_probs=67.4
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
++.+|.|....||++.+. ++ .++||.-...... . --.++...|.++|+.+.. |. +++++ +.+.+...+
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~--~---~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~i 77 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD--E---DVKKTALREVKVLRQLRH--EN-IVNLKEAFRRKGRLYL 77 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc--c---cchhHHHHHHHHHHhcCC--CC-eeehhheEEECCEEEE
Confidence 566888888889999876 34 7888865432211 1 122577788888887762 32 22222 235567899
Q ss_pred EEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||++ . ..+.....+.. .. -.++.+|...|+.+|...
T Consensus 78 v~e~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (288)
T cd07833 78 VFEYVE-R-TLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN 120 (288)
T ss_pred EEecCC-C-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 3 45544333322 22 256778899999888754
No 246
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=94.99 E-value=0.28 Score=41.30 Aligned_cols=107 Identities=16% Similarity=0.109 Sum_probs=65.9
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------- 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------- 106 (165)
.++.+|.|....||++.+. .+ .++||.-..... ..-...+...|...|+.+.. |..++-.-.+.
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-----NQTHAKRAYRELVLMKCVNH--KNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred EEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-----CchhHHHHHHHHHHHHhcCC--CCccccceeecccccccc
Confidence 4678999999999999876 34 788997542211 11223566778888876642 33322221121
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~t 152 (165)
.....+|||+++. .+.+.+...-. ...++.++...|+-+|...
T Consensus 101 ~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 146 (364)
T cd07875 101 FQDVYIVMELMDA---NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG 146 (364)
T ss_pred cCeEEEEEeCCCC---CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 1235799999983 34444433211 1247888999999999753
No 247
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=94.99 E-value=0.8 Score=37.10 Aligned_cols=107 Identities=16% Similarity=0.044 Sum_probs=66.8
Q ss_pred eEeccCCceeEEEEEEeCC---C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcC--CC
Q 045250 37 IKEVGDGNLNFVYIVVGTS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFDR--TM 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~--e~ 109 (165)
+..+|.|....||++.+.. + .++||.-..... .+.--.++...|..+|+.+.. |..++-.- +.+. ..
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~----~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~ 78 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE----QYTGISQSACREIALLRELKH--ENVVSLVEVFLEHADKS 78 (316)
T ss_pred EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc----cccCccHHHHHHHHHHHhcCC--CCccceEEEEeCCCCce
Confidence 4568999999999999854 4 799998765331 122223566778888887653 43333222 2333 45
Q ss_pred ceEEEecCCCCchHHHHHHHcC------CCC----HHHHHHHHHHHHHHHhcc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAG------IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g------~~~----~~~a~~iG~~La~~h~~t 152 (165)
..+|||+++. .+.+.+... ... -.++.+|...|.-+|...
T Consensus 79 ~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 128 (316)
T cd07842 79 VYLLFDYAEH---DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW 128 (316)
T ss_pred EEEEEeCCCc---CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 7899999973 344433221 111 247778889998888654
No 248
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=94.98 E-value=0.54 Score=37.56 Aligned_cols=106 Identities=16% Similarity=0.097 Sum_probs=69.0
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE-VYHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~e~~~~v 113 (165)
++.+|.|...-||++.+. +| .+++|.-..... ..-..++...|.+.|+.+.. |..++- -++.+.....++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~E~~~l~~l~~--~~iv~~~~~~~~~~~~~iv 76 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-----DEGVPSTAIREISLLKELNH--PNIVRLLDVVHSENKLYLV 76 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-----cccchhHHHHHHHHHHhcCC--CCccCHhheeccCCeEEEE
Confidence 467899999999999875 45 788886432111 01122456678888887752 332221 145577888899
Q ss_pred EecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ . .+++.+.... .. -.++.++...|+.+|...
T Consensus 77 ~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~ 119 (283)
T cd07835 77 FEFLD--L-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR 119 (283)
T ss_pred EeccC--c-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99996 2 5666665533 22 257778889999999764
No 249
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=94.97 E-value=0.92 Score=36.03 Aligned_cols=108 Identities=13% Similarity=0.037 Sum_probs=69.0
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC---
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTM--- 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~--- 109 (165)
+..+|.|...-||++.... + .+++|........ .. -......|...++.+.++--..+.+++.+ +.+.
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~~---~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE--EG---IPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEecccccc--ch---hhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 5678888888899999864 5 7888876543321 11 12345568888888876543344444433 4454
Q ss_pred --ceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250 110 --SLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 --~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
..++||+++ . .+.+.+.... .. -.++.+|...|+-+|...
T Consensus 79 ~~~~l~~e~~~-~--~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~ 127 (287)
T cd07838 79 LKLTLVFEHVD-Q--DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR 127 (287)
T ss_pred ceeEEEehhcc-c--CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 789999997 3 4555554421 12 247778888888888764
No 250
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=94.95 E-value=0.65 Score=36.52 Aligned_cols=105 Identities=12% Similarity=-0.010 Sum_probs=66.7
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------- 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------- 106 (165)
-++.++.|....||++.+. ++ .+++|.-.... ...++...|.++++.+... ..+++++.+-
T Consensus 10 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 10 LVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE--------DEEEEIKEEYNILRKYSNH--PNIATFYGAFIKKNPPG 79 (275)
T ss_pred heeeecCCCCeEEEEEEECCCCcEEEEEEEecCc--------hhHHHHHHHHHHHHHhcCC--CChheEEEEEEecCCCC
Confidence 3567888888889999986 34 78888744221 1335677788888876442 3455555543
Q ss_pred -CCCceEEEecCCCCchHHHHHHHc-----CCCCH----HHHHHHHHHHHHHHhcc
Q 045250 107 -RTMSLIGMRYLEPPHIILRKGLIA-----GIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 -~e~~~~vMEdl~~~~~~lr~~l~~-----g~~~~----~~a~~iG~~La~~h~~t 152 (165)
.+...++||+++ ...|.+.+.. +.... .++.++...|.-+|...
T Consensus 80 ~~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~ 133 (275)
T cd06608 80 NDDQLWLVMELCG--GGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK 133 (275)
T ss_pred cceEEEEEEEcCC--CCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 223579999998 3455555433 22222 36777888888888654
No 251
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=94.95 E-value=0.4 Score=39.24 Aligned_cols=106 Identities=18% Similarity=0.108 Sum_probs=68.3
Q ss_pred eEeccCCceeEEEEEEeC-CC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCc
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~ 110 (165)
.+.+|.|....||++.+. +| .+.+|....... .-...+...|.+.|+.+... | .+++++. .+....
T Consensus 12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~Ei~~l~~l~~h-~-~iv~~~~~~~~~~~~ 83 (303)
T cd05088 12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------KDDHRDFAGELEVLCKLGHH-P-NIINLLGACEHRGYL 83 (303)
T ss_pred eeeecCCCCceEEEEEEccCCceeeEEEEEecccCC------HHHHHHHHHHHHHHHHhcCC-C-CcceEEEEECCCCCc
Confidence 367899999999999864 33 346666443221 12234666788888777543 3 4555543 355678
Q ss_pred eEEEecCCCCchHHHHHHHcCC----------------CC-----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGI----------------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~----------------~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+||||++ ..+|.+.+.... .+ -.++.+|...|+-+|...
T Consensus 84 ~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g 144 (303)
T cd05088 84 YLAIEYAP--HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ 144 (303)
T ss_pred eEEEEeCC--CCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 89999997 346777665422 11 246778888899999754
No 252
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=94.92 E-value=0.44 Score=38.37 Aligned_cols=68 Identities=13% Similarity=0.030 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhc
Q 045250 80 RAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 80 R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~ 151 (165)
+...|+.+++.+. ...+++++.+ +.....+||||++ ...|...+.. +... -.++.+|...|+-+|..
T Consensus 62 ~~~~~~~~~~~l~---h~niv~~~~~~~~~~~~~lv~ey~~--~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 136 (274)
T cd05076 62 AFFETASLMSQVS---HIHLAFVHGVCVRGSENIMVEEFVE--HGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK 136 (274)
T ss_pred HHHHHHHHHhcCC---CCCeeeEEEEEEeCCceEEEEecCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 3344444554332 3445555554 5566789999998 3467666654 2222 25778888888888865
Q ss_pred c
Q 045250 152 T 152 (165)
Q Consensus 152 t 152 (165)
.
T Consensus 137 ~ 137 (274)
T cd05076 137 N 137 (274)
T ss_pred C
Confidence 4
No 253
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=94.92 E-value=0.43 Score=37.90 Aligned_cols=105 Identities=12% Similarity=-0.055 Sum_probs=67.9
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~ 111 (165)
....+|.|-...||++.+. ++ .+++|....... -...+...|.+.|+.+.. |..+ +++. .+.+...
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~iv-~~~~~~~~~~~~~ 81 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-------RYVQPLHEEIALHSYLKH--RNIV-QYLGSDSENGFFK 81 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH-------HHHHHHHHHHHHHHhcCC--CCee-eeeeeeccCCEEE
Confidence 3456888888889999876 44 789996542211 122456677777776642 3333 3333 4556778
Q ss_pred EEEecCCCCchHHHHHHHcC--CC--C----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAG--IK--Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g--~~--~----~~~a~~iG~~La~~h~~t 152 (165)
++||+++ ...|++.+... .. . ..++.+|...|+-+|...
T Consensus 82 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 128 (268)
T cd06624 82 IFMEQVP--GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ 128 (268)
T ss_pred EEEecCC--CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 45787777653 11 2 145678999999999653
No 254
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=94.87 E-value=0.47 Score=38.24 Aligned_cols=105 Identities=15% Similarity=0.119 Sum_probs=68.5
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC--CCc
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDR--TMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~--e~~ 110 (165)
+..+|.|....||++.+. ++ .+++|+-..... ...+ ..+...|...|+.+.. |. ++.++. .+. ...
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~---~~~~~~e~~~l~~l~h--~n-i~~~~~~~~~~~~~~~ 81 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKE--KEGF---PITSLREINILLKLQH--PN-IVTVKEVVVGSNLDKI 81 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccc--cccc---hhhHHHHHHHHHhcCC--CC-EEEEEEEEEecCCCcE
Confidence 456788888899999986 35 788887542221 1111 2345568888877752 33 444433 445 788
Q ss_pred eEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t 152 (165)
.+|||+++ . .|++.+..... . -.++.+|...|+-+|...
T Consensus 82 ~lv~e~~~-~--~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 126 (293)
T cd07843 82 YMVMEYVE-H--DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW 126 (293)
T ss_pred EEEehhcC-c--CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999998 2 67776655321 1 257888899999999765
No 255
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=94.86 E-value=0.38 Score=40.04 Aligned_cols=106 Identities=12% Similarity=0.096 Sum_probs=67.5
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC----
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR---- 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~---- 107 (165)
....+|.|....||++.+. +| .++||+-..... -.....+...|..+|+.+.. |. +.+++.+ +.
T Consensus 9 ~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~n-i~~~~~~~~~~~~~~ 80 (337)
T cd07858 9 PIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-----NRIDAKRTLREIKLLRHLDH--EN-VIAIKDIMPPPHREA 80 (337)
T ss_pred EEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-----ccchhHHHHHHHHHHHhcCC--CC-ccchHHheecccccc
Confidence 4568999999999999876 44 899998653221 11234567778888887643 22 2222211 11
Q ss_pred -CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 108 -TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 -e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
....++||+++. .+.+.+.++... -.++.+|...|.-+|...
T Consensus 81 ~~~~~lv~e~~~~---~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 128 (337)
T cd07858 81 FNDVYIVYELMDT---DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN 128 (337)
T ss_pred cCcEEEEEeCCCC---CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 235899999972 466666554332 246778888888888764
No 256
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=94.86 E-value=0.39 Score=37.79 Aligned_cols=108 Identities=18% Similarity=0.084 Sum_probs=66.9
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~ 112 (165)
.+.+|.|....||++.+. ++ .+++|.-..... ..+...-..+...|.++|+.+.. | .+.+++. .+.+...+
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~--~~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPD--SPETKKEVNALECEIQLLKNLQH--E-RIVQYYGCLRDDETLSI 81 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeeccc--chhhHHHHHHHHHHHHHHHhCCC--C-CeeeeEEEEccCCeEEE
Confidence 457888988899999875 34 788886332111 01111122345567777766532 3 3344443 36678889
Q ss_pred EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
+||+++ ...|++.+...... -.++.++...|+.+|..
T Consensus 82 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 123 (263)
T cd06625 82 FMEYMP--GGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN 123 (263)
T ss_pred EEEECC--CCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 999997 34677777654332 24677888888888854
No 257
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=94.85 E-value=0.5 Score=39.37 Aligned_cols=108 Identities=14% Similarity=0.037 Sum_probs=66.9
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~ 111 (165)
-++.||.|....||++... ++ .+.||.-...-... .....+...|..+++.... | +++.++. .+.....
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~~~~~~ 77 (331)
T cd05597 5 ILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLK----RAETACFREERDVLVNGDR--R-WITNLHYAFQDENNLY 77 (331)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHhCCC--C-CCCceEEEEecCCeEE
Confidence 3577999999999999876 34 78888754211110 1122345566666655422 3 3444432 3556678
Q ss_pred EEEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ ...|.+.+.+ +... ..++.+|...|+-+|...
T Consensus 78 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (331)
T cd05597 78 LVMDYYV--GGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG 122 (331)
T ss_pred EEEecCC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 3577777754 2222 245667788888888654
No 258
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=94.83 E-value=0.43 Score=38.40 Aligned_cols=106 Identities=13% Similarity=0.050 Sum_probs=68.0
Q ss_pred eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250 36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D 106 (165)
.+..+|.|..+.||++... .+ .+.+|+...... .-...+...|...|+.+.. | .+.+++. .+
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~ei~~l~~l~h--~-~iv~~~~~~~~ 79 (288)
T cd05050 9 YVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS------ADMQADFQREAALMAEFDH--P-NIVKLLGVCAV 79 (288)
T ss_pred ecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC------HHHHHHHHHHHHHHHhcCC--C-chheEEEEEcC
Confidence 3567888999999999863 23 688887643221 1112445567777776532 3 3334443 34
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC---------------------------CHHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~---------------------------~~~~a~~iG~~La~~h~~t 152 (165)
.+...++||+++ ..+|++.+..+.. .-.++.+|...|+.+|...
T Consensus 80 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~ 150 (288)
T cd05050 80 GKPMCLLFEYMA--YGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK 150 (288)
T ss_pred CCccEEEEecCC--CCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence 567789999998 3478887765321 0257888999999999753
No 259
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=94.80 E-value=0.35 Score=38.90 Aligned_cols=104 Identities=16% Similarity=0.211 Sum_probs=71.0
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
....++.|..--||++... ++ .+++|....... ..++...|.+.|+.+.. | .+++++ +.+.....
T Consensus 23 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--------~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 23 NLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--------NKELIINEILIMKDCKH--P-NIVDYYDSYLVGDELW 91 (286)
T ss_pred HhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--------hHHHHHHHHHHHHHCCC--C-CeeEEEEEEEECCEEE
Confidence 3466888888889999887 34 899997642211 34566778777776653 3 333333 34667888
Q ss_pred EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
++||+++ ..+|.+.+.... .. -.++.++...|+.+|...
T Consensus 92 lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g 136 (286)
T cd06614 92 VVMEYMD--GGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN 136 (286)
T ss_pred EEEeccC--CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 458888777653 22 247888899999999643
No 260
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=94.79 E-value=0.36 Score=39.15 Aligned_cols=105 Identities=11% Similarity=0.064 Sum_probs=67.2
Q ss_pred eEeccCCceeEEEEEEeCC-----------------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC
Q 045250 37 IKEVGDGNLNFVYIVVGTS-----------------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDH 98 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-----------------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~ 98 (165)
.+.+|.|....||++...+ + .+.+|....... .-...+...|.++|+.+.. | .
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~------~~~~~~~~~E~~~l~~l~~--~-~ 80 (296)
T cd05095 10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN------KNARNDFLKEIKIMSRLKD--P-N 80 (296)
T ss_pred eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC------HHHHHHHHHHHHHHHhCCC--C-C
Confidence 4679999999999985431 2 466666543211 1123455678888877743 3 3
Q ss_pred CceEE--EEcCCCceEEEecCCCCchHHHHHHHcCCC----------------CHHHHHHHHHHHHHHHhcc
Q 045250 99 VPEVY--HFDRTMSLIGMRYLEPPHIILRKGLIAGIK----------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 99 vP~v~--~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~----------------~~~~a~~iG~~La~~h~~t 152 (165)
+++++ +.+.+...++||+++ ..+|.+.+.+... .-.++.+|...|+-+|...
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 150 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYME--NGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN 150 (296)
T ss_pred cceEEEEEecCCccEEEEEeCC--CCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33443 346677889999997 3477776665321 2356788889999999765
No 261
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=94.79 E-value=0.28 Score=38.32 Aligned_cols=104 Identities=14% Similarity=0.041 Sum_probs=65.3
Q ss_pred ccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEEe
Q 045250 40 VGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGMR 115 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vME 115 (165)
+|.|....||++.+.+ | .+++|.-...... -.-..++...|.+.|+.+.. |.. ++++. -+.....++||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~~e~~~l~~~~h--~~i-~~~~~~~~~~~~~~lv~e 73 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMI----RKNQVDQVLTERDILSQAQS--PYV-VKLYYSFQGKKNLYLVME 73 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhh----hhhHHHHHHHHHHHHHhCCC--cch-hHHHHheecCcEEEEEEe
Confidence 4678888999999874 5 8999965322110 01234566667777776652 332 22221 24455679999
Q ss_pred cCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250 116 YLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
+++ ...|+..+.+... . -.++.+|...|+.+|...
T Consensus 74 ~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ 113 (265)
T cd05579 74 YLP--GGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNG 113 (265)
T ss_pred cCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 997 3477776655322 2 257888899999998654
No 262
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=94.76 E-value=0.58 Score=37.86 Aligned_cols=108 Identities=11% Similarity=-0.049 Sum_probs=66.5
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
...+|.|...-||++... ++ .+.+|+-.+..... . -.......|.++|+.+.. |..++-. .+.+.+...++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~---~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv 78 (285)
T cd05632 5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK-R---KGESMALNEKQILEKVNS--QFVVNLAYAYETKDALCLV 78 (285)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh-h---hHHHHHHHHHHHHHHcCC--cCceeEEEEEecCCEEEEE
Confidence 466899999999999875 45 68888754332110 0 112234568888887754 3444433 33455667799
Q ss_pred EecCCCCchHHHHHHHc-CC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIA-GI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~-g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|+..+.. +. .. -.++.++...|.-+|...
T Consensus 79 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ 122 (285)
T cd05632 79 LTIMN--GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN 122 (285)
T ss_pred EEecc--CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99998 3466665543 21 11 246677788888888654
No 263
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=94.75 E-value=0.27 Score=39.30 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=64.0
Q ss_pred eccCCceeEEEEEEeCCC----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 39 EVGDGNLNFVYIVVGTSG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
+||.|....||++...++ .+++|.-..... .-..++...|...++.+.. |..++-+ .+.+.....+|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~~~~l~h--~~iv~~~~~~~~~~~~~lv 73 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS------SKEQNEFLQQGDPYRILQH--PNILQCLGQCVEAIPYLLV 73 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC------hHHHHHHHHHHHHHhccCC--cchhheEEEecCCCccEEE
Confidence 578888888998865322 466666432211 1123566777777765532 4444333 23455667899
Q ss_pred EecCCCCchHHHHHHHcCCC-----C----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIK-----Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~-----~----~~~a~~iG~~La~~h~~t 152 (165)
|||++ ..+|++.+.+... . -.++.+|...|.-+|...
T Consensus 74 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 119 (268)
T cd05086 74 FEYCE--LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN 119 (268)
T ss_pred EecCC--CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 4578777765321 1 246778889999999654
No 264
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=94.70 E-value=0.25 Score=41.37 Aligned_cols=106 Identities=15% Similarity=0.092 Sum_probs=65.6
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------ 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------ 107 (165)
.++.+|.|....||++.+. .+ .+.||.-..... -.-...|...|...|+.+.. |..++-.-.+..
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-----NQTHAKRAYRELVLMKCVNH--KNIISLLNVFTPQKSLEE 93 (355)
T ss_pred EEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-----ChHHHHHHHHHHHHHHHhCC--Cchhceeeeeeccccccc
Confidence 4678999999999999875 34 788886432111 11223566678887776642 433332222221
Q ss_pred -CCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 108 -TMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 -e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
....+|||+++. .+.+.+.. ... ..++.+|...|+-+|...
T Consensus 94 ~~~~~lv~e~~~~---~l~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~g 139 (355)
T cd07874 94 FQDVYLVMELMDA---NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAG 139 (355)
T ss_pred cceeEEEhhhhcc---cHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 235799999983 34444432 222 247888999999999754
No 265
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=94.69 E-value=0.69 Score=37.86 Aligned_cols=108 Identities=15% Similarity=-0.027 Sum_probs=69.3
Q ss_pred eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC
Q 045250 36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDR 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~ 107 (165)
-.+.+|.|....||++..- .+ .+.||.-..... .-..++...|.++|+.+... |..++-+ ++.+.
T Consensus 39 ~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~~ 111 (302)
T cd05055 39 FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH------SSEREALMSELKIMSHLGNH-ENIVNLLGACTIG 111 (302)
T ss_pred EcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC------hHHHHHHHHHHHHHHhccCC-CCcceEEEEEecC
Confidence 3567899999999999742 12 466665443221 12235677888899887543 4433332 23455
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t 152 (165)
....++||+++ ...|.+.+..... . -.++.+|...|+-+|...
T Consensus 112 ~~~~lv~e~~~--~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ 161 (302)
T cd05055 112 GPILVITEYCC--YGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN 161 (302)
T ss_pred CceEEEEEcCC--CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 66789999998 3477777754321 1 247788888999999764
No 266
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=94.68 E-value=0.65 Score=36.42 Aligned_cols=106 Identities=19% Similarity=0.188 Sum_probs=66.2
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
+..+|.|..+-+|.+.+. +| .+++|.-... +.. .-...+...|.++|+.+.. |. +++++ +.+.....+
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~-~~~----~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~l 76 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINIS-KMS----PKEREESRKEVAVLSNMKH--PN-IVQYQESFEENGNLYI 76 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhH-hCC----hHHHHHHHHHHHHHHhCCC--CC-eeeeEeeecCCCeEEE
Confidence 677899999999999876 34 7888863211 100 1122456667777776653 33 33444 335566789
Q ss_pred EEecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t 152 (165)
|||++. ...|.+.+.... .. -.++.++...|+-+|...
T Consensus 77 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (256)
T cd08218 77 VMDYCE--GGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK 121 (256)
T ss_pred EEecCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 345666654421 11 245778888899888543
No 267
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=94.68 E-value=0.27 Score=40.07 Aligned_cols=106 Identities=12% Similarity=0.094 Sum_probs=68.4
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
....+|.|....||++.+. ++ .++||.-. . ...-..++...|...|+.+.. |..++-. .+.+.+...+
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~----~---~~~~~~~~~~~e~~~l~~l~h--~~ii~~~~~~~~~~~~~l 96 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMD----L---RKQQRRELLFNEVVIMRDYHH--ENVVDMYNSYLVGDELWV 96 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEe----c---chHHHHHHHHHHHHHHHhCCC--CcHHHHHHheecCCeEEE
Confidence 4677999999999999875 34 78888531 1 111223455567777766532 3322211 2446778899
Q ss_pred EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...|.+.+..+... -.++.+|...|+-+|...
T Consensus 97 v~e~~~--~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ 138 (292)
T cd06658 97 VMEFLE--GGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQG 138 (292)
T ss_pred EEeCCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 34676666555432 257788888999999764
No 268
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=94.66 E-value=0.29 Score=39.39 Aligned_cols=106 Identities=12% Similarity=-0.009 Sum_probs=63.1
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
++.+|.|....||++.+. ++ .+++|.-..... .-...+...|.+.|+.+.. |..++-+ ++.+.+...+|
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv 77 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT------VELQKQIMSELEILYKCDS--PYIIGFYGAFFVENRISIC 77 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC------hHHHHHHHHHHHHHHhCCC--CCeeeEEEEEEECCEEEEE
Confidence 467899999999999875 44 788885431110 0112345567777765532 3333322 34466777899
Q ss_pred EecCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLI-AGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~-~g~~~~~~a~~iG~~La~~h~~t 152 (165)
||+++. . .+..... .......++.++...|+-+|...
T Consensus 78 ~e~~~~-~-~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 115 (279)
T cd06619 78 TEFMDG-G-SLDVYRKIPEHVLGRIAVAVVKGLTYLWSLK 115 (279)
T ss_pred EecCCC-C-ChHHhhcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999983 3 3322110 00111357888888899888765
No 269
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=94.65 E-value=0.099 Score=46.49 Aligned_cols=103 Identities=20% Similarity=0.210 Sum_probs=65.2
Q ss_pred eeEeccCCceeEEEEEEeCC-C-----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR-- 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~-- 107 (165)
-+..||-|.+--||.|.+.+ + +|+-|.++..... ..|...|.++|+...- .+.|.+|+.-+
T Consensus 81 llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkK--------l~Ra~tE~eIL~~lDH---PFlPTLYa~fet~ 149 (459)
T KOG0610|consen 81 LLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKK--------LKRAQTEREILSLLDH---PFLPTLYASFETD 149 (459)
T ss_pred HHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhH--------HHHHHHHHHHHHhcCC---Cccchhhheeecc
Confidence 45678999999999999874 2 5666666655332 3699999999977644 34677775433
Q ss_pred CCceEEEecCCC-CchHHHHHHHcCCCCHH-----HHHHHHHHHHHHHh
Q 045250 108 TMSLIGMRYLEP-PHIILRKGLIAGIKYPL-----LAEHMSEFMAKTLF 150 (165)
Q Consensus 108 e~~~~vMEdl~~-~~~~lr~~l~~g~~~~~-----~a~~iG~~La~~h~ 150 (165)
+-..++||||++ |.-.||+- +.|+.++. .|+++--+|=-+|.
T Consensus 150 ~~~cl~meyCpGGdL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLHm 197 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLHM 197 (459)
T ss_pred ceeEEEEecCCCccHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHHh
Confidence 456789999995 33344442 12455532 33344444444454
No 270
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=94.63 E-value=0.63 Score=36.83 Aligned_cols=106 Identities=16% Similarity=0.070 Sum_probs=66.0
Q ss_pred eeEeccCCceeEEEEEEeC-CC----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCC
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e 108 (165)
..+.+|.|....||++.+. ++ .+.+|....... .-...+...|.+.|+.+.. | ++.+++ +.+.+
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~ 79 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT------EKQRQDFLSEASIMGQFSH--H-NIIRLEGVVTKFK 79 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC------HHHHHHHHHHHHHHhcCCC--C-CeeEEEEEEccCC
Confidence 3567898988999999874 22 477776543221 0112345567766665532 3 333333 33556
Q ss_pred CceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
...+|||+++ ...|++.+.+. ... -.++.++...|..+|...
T Consensus 80 ~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 127 (268)
T cd05063 80 PAMIITEYME--NGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN 127 (268)
T ss_pred CcEEEEEcCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 6789999998 34677777543 222 256778888888888765
No 271
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=94.63 E-value=0.7 Score=36.72 Aligned_cols=106 Identities=12% Similarity=0.064 Sum_probs=68.9
Q ss_pred eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 045250 36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D 106 (165)
.++.+|.|....||++... +. .+++|..... ...--..+...|.++|+.+.. |. +++++.+ +
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~ 79 (275)
T cd05046 9 EITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT------KDENLQSEFRRELDMFRKLSH--KN-VVRLLGLCRE 79 (275)
T ss_pred eeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc------cchHHHHHHHHHHHHHHhcCC--cc-eeeeEEEECC
Confidence 5677899999999999853 12 5777754311 111224567788888887743 33 3445544 4
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC---------CC-----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGI---------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~---------~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+...+|||+++ ...|++.+.... .+ ..++.+|...|+-+|...
T Consensus 80 ~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~ 137 (275)
T cd05046 80 AEPHYMILEYTD--LGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR 137 (275)
T ss_pred CCcceEEEEecC--CCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC
Confidence 567899999997 457888776533 11 246678888888888553
No 272
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=94.63 E-value=0.39 Score=38.65 Aligned_cols=107 Identities=15% Similarity=0.083 Sum_probs=66.3
Q ss_pred eeEeccCCceeEEEEEEeCCC------------------eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG------------------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPD 97 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g------------------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~ 97 (165)
-++.+|.|....||++.+... .+++|.-..-. -.-..++...|.++|+.+.. |.
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~------~~~~~~~~~~e~~~l~~l~~--~~ 80 (296)
T cd05051 9 FVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA------SDNAREDFLKEVKILSRLSD--PN 80 (296)
T ss_pred ccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc------CHHHHHHHHHHHHHHHhcCC--CC
Confidence 367889999999999987532 24555422111 01122345567777777643 43
Q ss_pred CCceE-EEEcCCCceEEEecCCCCchHHHHHHHcCC-----------CC-----HHHHHHHHHHHHHHHhcc
Q 045250 98 HVPEV-YHFDRTMSLIGMRYLEPPHIILRKGLIAGI-----------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 98 ~vP~v-~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~-----------~~-----~~~a~~iG~~La~~h~~t 152 (165)
.++-+ ++.+.....++||+++ ..+|.+.+.+.. .. -.++.++...|+-+|...
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~ 150 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYME--NGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN 150 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCC--CCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 33322 2234578899999998 357777776543 11 246788888999999765
No 273
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=94.62 E-value=0.23 Score=39.36 Aligned_cols=105 Identities=14% Similarity=0.063 Sum_probs=62.4
Q ss_pred EeccCCceeEEEEEEeCCC----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250 38 KEVGDGNLNFVYIVVGTSG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------- 106 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------- 106 (165)
+.+|.|....||++.+... .+.+|.-...... .-..++...|.+.|+.+. -..+++++.+.
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~-----~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~ 76 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICT-----RSEMEDFLSEAVCMKEFD---HPNVMRLIGVCLQTVESE 76 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCC-----HHHHHHHHHHHHHHHhCC---CCCcceEEEEEccCCccc
Confidence 4688999999999987643 3666655432111 011244556777777663 23455555431
Q ss_pred -CCCceEEEecCCCCchHHHHHHHc------CCC-----CHHHHHHHHHHHHHHHhcc
Q 045250 107 -RTMSLIGMRYLEPPHIILRKGLIA------GIK-----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 -~e~~~~vMEdl~~~~~~lr~~l~~------g~~-----~~~~a~~iG~~La~~h~~t 152 (165)
.....++|||++ +.+|.+.+.. ... .-.++.+|...|+-+|...
T Consensus 77 ~~~~~~~v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 132 (272)
T cd05075 77 GYPSPVVILPFMK--HGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS 132 (272)
T ss_pred CCCCcEEEEEeCC--CCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 123579999998 2356665532 111 1246778888899999654
No 274
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=94.60 E-value=0.96 Score=36.38 Aligned_cols=105 Identities=16% Similarity=0.087 Sum_probs=67.2
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
.++.+|.|...-||++... +| .+++|....... . -...+...|...|+.+.. |. +++++ +.+.+...
T Consensus 9 ~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~---~~~~~~~~e~~~l~~l~h--~n-i~~~~~~~~~~~~~~ 79 (291)
T cd07870 9 NLEKLGEGSYATVYKGISRINGQLVALKVISMKTE---E---GVPFTAIREASLLKGLKH--AN-IVLLHDIIHTKETLT 79 (291)
T ss_pred EEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc---C---CCcHHHHHHHHHHHhcCC--CC-EeEEEEEEecCCeEE
Confidence 5678999999999999875 44 899998643221 1 112345678888887643 32 33444 34566778
Q ss_pred EEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||+++. .+.+.+... ... ..++.+|...|+-+|...
T Consensus 80 lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 123 (291)
T cd07870 80 FVFEYMHT---DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH 123 (291)
T ss_pred EEEecccC---CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999972 333344332 122 246778888899898765
No 275
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=94.60 E-value=0.63 Score=37.71 Aligned_cols=108 Identities=11% Similarity=0.018 Sum_probs=65.4
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~~~~v 113 (165)
.+.+|.|....||.+.+. ++ .++||.-.+-... . .-...+...|..+|+.+.. |..++-...+ +.+...+|
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~-~---~~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv 78 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-K---RKGESMALNEKQILEKVNS--RFVVSLAYAYETKDALCLV 78 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc-c---hHHHHHHHHHHHHHHhCCC--CCeeeeeEEEecCCEEEEE
Confidence 456899999999999876 44 7888864322110 0 0112334568888877643 4444444333 44666799
Q ss_pred EecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ..+|++.+.... .. -.++.++...|.-+|...
T Consensus 79 ~e~~~--g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 122 (285)
T cd05630 79 LTLMN--GGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER 122 (285)
T ss_pred EEecC--CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99997 346766664321 12 145677788888888643
No 276
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=94.59 E-value=0.77 Score=37.34 Aligned_cols=106 Identities=18% Similarity=0.150 Sum_probs=69.9
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
.++.+|.|...-||++.+. ++ .+++|.....- .-..++...|...|+.... |..++-. ++.+.+...+
T Consensus 23 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-------~~~~~~~~~e~~~l~~l~h--p~i~~~~~~~~~~~~~~l 93 (293)
T cd06647 23 RFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ-------QPKKELIINEILVMRENKH--PNIVNYLDSYLVGDELWV 93 (293)
T ss_pred eeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc-------chHHHHHHHHHHHHhhcCC--CCeeehhheeeeCCcEEE
Confidence 5678999999999999865 44 78889743111 1123556667777776642 4332222 3346778899
Q ss_pred EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
|||+++ ...+++.+.++... ..++.++...|+.+|...
T Consensus 94 v~e~~~--~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~g 135 (293)
T cd06647 94 VMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 135 (293)
T ss_pred EEecCC--CCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 35777777654432 246778888888888654
No 277
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=94.53 E-value=0.7 Score=36.90 Aligned_cols=105 Identities=11% Similarity=0.043 Sum_probs=67.4
Q ss_pred eEeccCCceeEEEEEEeCC-----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cC
Q 045250 37 IKEVGDGNLNFVYIVVGTS-----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF---DR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~ 107 (165)
.+.++.|....||++.... + .+++|....... .....+...|...|+.+. .|..++ ++++ +.
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~------~~~~~~~~~e~~~l~~l~--h~ni~~-~~~~~~~~~ 81 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS------EIQVTLLLQESCLLYGLS--HQNILP-ILHVCIEDG 81 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC------HHHHHHHHHHHHHHHhCC--CCCCCe-EEEEEecCC
Confidence 3667888888999998754 4 788887543221 122355666777776552 244444 4433 34
Q ss_pred CCceEEEecCCCCchHHHHHHHcCC--------CC-----HHHHHHHHHHHHHHHhcc
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIAGI--------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~g~--------~~-----~~~a~~iG~~La~~h~~t 152 (165)
....+++|+.+ ...|...+.... .+ ..++.+|...|+-+|...
T Consensus 82 ~~~~~~~~~~~--~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 137 (280)
T cd05043 82 EPPFVLYPYMN--WGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG 137 (280)
T ss_pred CCCEEEEEcCC--CCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 67888999987 457777775531 11 257788899999898654
No 278
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=94.51 E-value=0.38 Score=43.93 Aligned_cols=120 Identities=17% Similarity=0.055 Sum_probs=74.6
Q ss_pred eeEeccCCceeEEEEEEeC-CCeE-EEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SGSF-VIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~gsv-IvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~ 111 (165)
.+.+||-|-.--||.+.-. +|.+ -+|- ++...---.=-+.-.+.|..+|... -...|-++|+ -|+++--
T Consensus 145 ~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~----LkKS~M~~~~Qv~hV~aERdiL~~~---ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 145 LLKVIGKGAFGEVRLARKKDTGEIYAMKI----LKKSEMLKKNQVEHVRAERDILAEV---DSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred hheeeccccceeEEEEEEccCCcEEeeec----ccHHHHHhhhhHHHHHHHHHHhhhc---CCCcEEEEEEEecCCCeeE
Confidence 6788999999999999865 5643 3332 2211000011234556777787662 2345566653 4778888
Q ss_pred EEEecCCCCchHHHHHHHcCCCCH-HH----HHHHHHHHHHHHhcc---------------------cccccCchhhhc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKYP-LL----AEHMSEFMAKTLFYT---------------------SLLYRTTTEHKR 164 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~~-~~----a~~iG~~La~~h~~t---------------------sd~~l~~~~kk~ 164 (165)
+|||||+ +.+++..|+..-..+ +. +++.--++..+|... |||+|.....|.
T Consensus 218 LiMEylP--GGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 218 LIMEYLP--GGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEecC--CccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999 458888888865442 22 233344455666654 888888766553
No 279
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=94.51 E-value=0.81 Score=37.33 Aligned_cols=107 Identities=15% Similarity=-0.004 Sum_probs=69.0
Q ss_pred eeEeccCCceeEEEEEEeCC--------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--
Q 045250 36 TIKEVGDGNLNFVYIVVGTS--------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-- 104 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~--------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-- 104 (165)
-.++||.|....||++.... + .+++|.-.+.... -...+...|.+.|+.+... |. +++++.
T Consensus 22 i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~e~~~l~~l~~h-~~-i~~~~~~~ 93 (307)
T cd05098 22 LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATE------KDLSDLISEMEMMKMIGKH-KN-IINLLGAC 93 (307)
T ss_pred EeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCCh------HHHHHHHHHHHHHHHhcCC-CC-EeeEEEEE
Confidence 44789999999999997531 1 4777765543211 1235666788888877543 43 333332
Q ss_pred EcCCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250 105 FDRTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 105 ~D~e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t 152 (165)
.+.....+|||+++ ...|.+.+.... .. -.++.++...|+-+|...
T Consensus 94 ~~~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g 160 (307)
T cd05098 94 TQDGPLYVIVEYAS--KGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK 160 (307)
T ss_pred ecCCceEEEEecCC--CCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34466779999998 347777776531 11 146888999999999753
No 280
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=94.48 E-value=0.52 Score=38.19 Aligned_cols=104 Identities=13% Similarity=0.091 Sum_probs=66.5
Q ss_pred EeccCCceeEEEEEEeCC-------------C---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce
Q 045250 38 KEVGDGNLNFVYIVVGTS-------------G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE 101 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~-------------g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~ 101 (165)
+.||.|....||++.... + .+.||...+.... -..++...|.++|+.+.. | .+++
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~ei~~l~~l~h--~-~i~~ 81 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTK------TARNDFLKEIKIMSRLKN--P-NIIR 81 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCH------HHHHHHHHHHHHHHhCCC--C-CcCe
Confidence 678999999999987531 1 4778877643211 112345567777776643 3 3444
Q ss_pred EEE--EcCCCceEEEecCCCCchHHHHHHHcCC-------------CC----HHHHHHHHHHHHHHHhcc
Q 045250 102 VYH--FDRTMSLIGMRYLEPPHIILRKGLIAGI-------------KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 102 v~~--~D~e~~~~vMEdl~~~~~~lr~~l~~g~-------------~~----~~~a~~iG~~La~~h~~t 152 (165)
++. .+.....+|||+++ ...|.+.+.... .. -.++.++...|+-+|...
T Consensus 82 ~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 149 (295)
T cd05097 82 LLGVCVSDDPLCMITEYME--NGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN 149 (295)
T ss_pred EEEEEcCCCccEEEEecCC--CCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 443 35667789999998 346766664421 01 246788899999999765
No 281
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=94.48 E-value=0.84 Score=37.99 Aligned_cols=107 Identities=14% Similarity=-0.026 Sum_probs=63.2
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~ 111 (165)
-++.||.|....||++... ++ .+++|.-...-... .........|..+++... ...++.++. .+.+...
T Consensus 5 i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~---~~~i~~l~~~~~~~~~~~ 77 (331)
T cd05624 5 IIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLK----RAETACFREERNVLVNGD---CQWITTLHYAFQDENYLY 77 (331)
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHh----hHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEcCCEEE
Confidence 3578999999999999876 34 68888643211000 011223344555554332 223444432 3556677
Q ss_pred EEEecCCCCchHHHHHHHcC-C-CCH----HHHHHHHHHHHHHHhc
Q 045250 112 IGMRYLEPPHIILRKGLIAG-I-KYP----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g-~-~~~----~~a~~iG~~La~~h~~ 151 (165)
+||||++ +..|.+.+.+. . ... .++.+|...|.-+|..
T Consensus 78 lv~Ey~~--gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~ 121 (331)
T cd05624 78 LVMDYYV--GGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL 121 (331)
T ss_pred EEEeCCC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9999998 34777777652 2 222 3456778888888854
No 282
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=94.47 E-value=0.59 Score=37.01 Aligned_cols=104 Identities=13% Similarity=0.038 Sum_probs=66.1
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c------
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D------ 106 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D------ 106 (165)
++.+|.|....||++... ++ .+++|.-... .-...+...|...|+.+... |.. .+++.+ +
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~--------~~~~~~~~~e~~~l~~~~~h-~~i-~~~~~~~~~~~~~~~ 80 (272)
T cd06637 11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--------GDEEEEIKQEINMLKKYSHH-RNI-ATYYGAFIKKNPPGM 80 (272)
T ss_pred HHheeecCCeEEEEEEEcCCCcEEEEEEEEcC--------CccHHHHHHHHHHHHHhcCC-CCe-eeEeeEEeecCCCCC
Confidence 456888888889999875 34 6888864311 12235677788888776442 333 333322 1
Q ss_pred CCCceEEEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++ ...|.+.+... ... -.++.++...|+-+|...
T Consensus 81 ~~~~~iv~e~~~--~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ 131 (272)
T cd06637 81 DDQLWLVMEFCG--AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK 131 (272)
T ss_pred CcEEEEEEEcCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 234679999998 34777766652 222 247788899999999764
No 283
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=94.45 E-value=0.88 Score=36.31 Aligned_cols=102 Identities=12% Similarity=0.084 Sum_probs=60.8
Q ss_pred eccCCceeEEEEEEeCC-------------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGTS-------------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH 104 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~-------------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~ 104 (165)
.+|.|..+.||+..... . .+++|.-.+.-+ -...+...|+..|+.+. -.++++++.
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-------~~~~~~~~~~~~l~~l~---hp~iv~~~~ 71 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR-------DISLAFFETASMMRQVS---HKHIVLLYG 71 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh-------hHHHHHHHHHHHHHhCC---CCCEeeEEE
Confidence 57889999999987431 1 366665322111 11123344555555443 234555554
Q ss_pred --EcCCCceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 105 --FDRTMSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 105 --~D~e~~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
.+.....++||+++ ...|...+... ... -.++.+|...|+-+|...
T Consensus 72 ~~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 125 (262)
T cd05077 72 VCVRDVENIMVEEFVE--FGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD 125 (262)
T ss_pred EEecCCCCEEEEeccc--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence 46678899999998 34566655432 222 257888999999999654
No 284
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=94.42 E-value=0.62 Score=37.10 Aligned_cols=105 Identities=19% Similarity=0.221 Sum_probs=62.4
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
.++.+|.|....||++.+. +| .+++|+...-... -...+...|...+..... .|..+ +++ +.+.....
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~e~~~~~~~~~-~~~iv-~~~~~~~~~~~~~ 76 (283)
T cd06617 5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS------QEQKRLLMDLDISMRSVD-CPYTV-TFYGALFREGDVW 76 (283)
T ss_pred EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc------HHHHHHHHHHHHHHHHcC-CCCee-eeeEEEecCCcEE
Confidence 3577899999999999886 45 8999976533211 112355555554332222 23333 333 34566778
Q ss_pred EEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhc
Q 045250 112 IGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
++||+++. .+.+.+.. +..+ -.++.+|...|.-+|..
T Consensus 77 lv~e~~~~---~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 122 (283)
T cd06617 77 ICMEVMDT---SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK 122 (283)
T ss_pred EEhhhhcc---cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 99999973 33333322 2222 25678888889989864
No 285
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.41 E-value=0.59 Score=40.49 Aligned_cols=104 Identities=16% Similarity=0.038 Sum_probs=71.5
Q ss_pred EeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC-C-CceEEE
Q 045250 38 KEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR-T-MSLIGM 114 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~-e-~~~~vM 114 (165)
..+|.|-...|||....+| .|.||+-.+.. ... ......|.++|..++ + |..|+=+=++.+ + ..++|.
T Consensus 81 ~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~------~~~-~~eF~~Ei~~ls~l~-H-~Nlv~LlGyC~e~~~~~~LVY 151 (361)
T KOG1187|consen 81 NLIGEGGFGTVYKGVLSDGTVVAVKRLSSNS------GQG-EREFLNEVEILSRLR-H-PNLVKLLGYCLEGGEHRLLVY 151 (361)
T ss_pred cceecCCCeEEEEEEECCCCEEEEEEecCCC------Ccc-hhHHHHHHHHHhcCC-C-cCcccEEEEEecCCceEEEEE
Confidence 4577777889999999987 89999322221 111 223777888887766 2 555554333333 3 279999
Q ss_pred ecCCCCchHHHHHHHcCCC-------CHHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIK-------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~-------~~~~a~~iG~~La~~h~~t 152 (165)
||.+ ++ +|.+.|..... .-.+|..++..|+-+|...
T Consensus 152 Eym~-nG-sL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~ 194 (361)
T KOG1187|consen 152 EYMP-NG-SLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGC 194 (361)
T ss_pred EccC-CC-CHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCC
Confidence 9999 44 88887766542 2379999999999999866
No 286
>PHA03211 serine/threonine kinase US3; Provisional
Probab=94.39 E-value=0.73 Score=41.12 Aligned_cols=98 Identities=13% Similarity=0.057 Sum_probs=67.4
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~ 111 (165)
-...||.|....||++.... + .|+||... ..+...|+++|+.+.. | ++.+++. .+.....
T Consensus 173 i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------------~~~~~~E~~iL~~L~H--p-nIv~l~~~~~~~~~~~ 236 (461)
T PHA03211 173 IHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------------YASSVHEARLLRRLSH--P-AVLALLDVRVVGGLTC 236 (461)
T ss_pred EEEEEccCCCeEEEEEEECCCCCEEEEeccc-------------ccCHHHHHHHHHHCCC--C-CCCcEEEEEEECCEEE
Confidence 45679999999999999874 4 79999521 1234568888887743 3 3444543 4567788
Q ss_pred EEEecCCCCchHHHHHHHcCC--C----CHHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGI--K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~--~----~~~~a~~iG~~La~~h~~t 152 (165)
+|||++.. .|...+.... . .-.++.+|...|+-+|...
T Consensus 237 lv~e~~~~---~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g 280 (461)
T PHA03211 237 LVLPKYRS---DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG 280 (461)
T ss_pred EEEEccCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999972 4555554421 1 1368889999999999764
No 287
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=94.31 E-value=0.8 Score=37.97 Aligned_cols=105 Identities=16% Similarity=0.245 Sum_probs=66.0
Q ss_pred EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----cCCCce
Q 045250 38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF----DRTMSL 111 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----D~e~~~ 111 (165)
+.+|.|....||++.+. +| .++||.-....+. . -...+...|...|+.+... |..++ ++.+ +.....
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~---~~~~~~~~E~~~l~~l~~h-~ni~~-~~~~~~~~~~~~~~ 85 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN--A---TDAQRTFREIMFLQELGDH-PNIVK-LLNVIKAENDKDIY 85 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc--c---hhhhhhhHHHHHHHHhcCC-CCccc-eeeeeccCCCceEE
Confidence 45777777789999876 34 7888976432221 1 1123455688888777332 44443 4433 223468
Q ss_pred EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
+|||+++ . .|...+..+... -.++.+|...|+-+|...
T Consensus 86 lv~e~~~-~--~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 127 (337)
T cd07852 86 LVFEYME-T--DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGN 127 (337)
T ss_pred EEecccc-c--CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 2 677766655322 147788899999998753
No 288
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=94.30 E-value=0.59 Score=40.65 Aligned_cols=84 Identities=15% Similarity=0.018 Sum_probs=53.9
Q ss_pred eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 045250 36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D 106 (165)
-.+.||.|....||++... .+ .+.||.-.+.... ...++...|.++|+.+... |. +++++.+ +
T Consensus 41 ~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~~Ei~~l~~l~~H-pn-Iv~l~~~~~~ 112 (400)
T cd05105 41 LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS------SEKQALMSELKIMTHLGPH-LN-IVNLLGACTK 112 (400)
T ss_pred hhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh------HHHHHHHHHHHHHHhcCCC-CC-eeeEEEEEcc
Confidence 3578999999999998753 12 4777865433221 1235677788888877543 43 4445443 4
Q ss_pred CCCceEEEecCCCCchHHHHHHH
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLI 129 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~ 129 (165)
.....+||||++ ..+|.+.|.
T Consensus 113 ~~~~~lv~Ey~~--~g~L~~~l~ 133 (400)
T cd05105 113 SGPIYIITEYCF--YGDLVNYLH 133 (400)
T ss_pred CCceEEEEEecC--CCcHHHHHH
Confidence 566899999998 336655554
No 289
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=94.28 E-value=1.3 Score=36.73 Aligned_cols=106 Identities=16% Similarity=0.128 Sum_probs=69.2
Q ss_pred eEeccCCceeEEEEEEeC-C--C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc------
Q 045250 37 IKEVGDGNLNFVYIVVGT-S--G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------ 106 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~--g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------ 106 (165)
.+.+|.|....||++.+. . + .+++|.-...... .....+...|.++|+.+... | .+++++.++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~~h-~-~iv~~~~~~~~~~~~ 77 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK-----KILAKRALRELKLLRHFRGH-K-NITCLYDMDIVFPGN 77 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc-----chhHHHHHHHHHHHHHhcCC-C-Chheeeeeeeecccc
Confidence 467889999999999976 3 5 7888875422211 12345777899998887543 3 344555432
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++ . .|.+.+..+..+ -.++.+|...|..+|...
T Consensus 78 ~~~~~~~~e~~~-~--~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g 125 (332)
T cd07857 78 FNELYLYEELME-A--DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSAN 125 (332)
T ss_pred CCcEEEEEeccc-C--CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 133457778776 2 577777665443 247788899999999765
No 290
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=94.27 E-value=0.65 Score=37.55 Aligned_cols=108 Identities=12% Similarity=0.034 Sum_probs=66.0
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~v 113 (165)
++.+|.|....||++.+. ++ .+.||+-....-. . .....+...|..+|+.++. |..++-... -+.+...+|
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~---~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv 78 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-K---RKGEAMALNEKQILEKVNS--RFVVSLAYAYETKDALCLV 78 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh-h---hhhHHHHHHHHHHHHhcCC--CCEeeeeeeecCCCeEEEE
Confidence 567899999999999875 45 6888875432110 0 0112334568888877753 444443322 355678899
Q ss_pred EecCCCCchHHHHHHHc-CC-CC-H----HHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIA-GI-KY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~-g~-~~-~----~~a~~iG~~La~~h~~t 152 (165)
|||+. ...|...+.. +. .+ . .++.++...|.-+|...
T Consensus 79 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (285)
T cd05605 79 LTLMN--GGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER 122 (285)
T ss_pred EeccC--CCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99997 3466655533 21 22 2 35677788888888543
No 291
>PTZ00284 protein kinase; Provisional
Probab=94.23 E-value=0.81 Score=40.21 Aligned_cols=104 Identities=11% Similarity=0.001 Sum_probs=65.8
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCC---CCCceEEEE---cC
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCP---DHVPEVYHF---DR 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p---~~vP~v~~~---D~ 107 (165)
-+..||.|....||++.+.. + .|.||.-.... ........|..+|+.+..... ..++.++.| +.
T Consensus 133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~ 204 (467)
T PTZ00284 133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--------KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET 204 (467)
T ss_pred EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--------hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence 35679999999999998763 4 78899753211 112345678888887765321 124444433 22
Q ss_pred CCceEEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHh
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~ 150 (165)
....+|||++++ .+.+.+.+.. .. ..++.+|...|.-+|.
T Consensus 205 ~~~~iv~~~~g~---~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~ 249 (467)
T PTZ00284 205 GHMCIVMPKYGP---CLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHT 249 (467)
T ss_pred ceEEEEEeccCC---CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 456789998873 3444454432 22 2577888899999996
No 292
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=94.22 E-value=0.64 Score=42.61 Aligned_cols=109 Identities=23% Similarity=0.189 Sum_probs=67.3
Q ss_pred cceeEeccCCceeEEEEEEeCC-C-eEEEEecCcccccc------------------CCC-CCCChH-------------
Q 045250 34 DLTIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCI------------------GES-WPMTKE------------- 79 (165)
Q Consensus 34 ~~~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~------------------~~~-~~l~~~------------- 79 (165)
..+.++++.|.+--|+++.+.+ | .|+||--+|-++.. .++ ..++..
T Consensus 121 ~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~E 200 (537)
T PRK04750 121 DFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDE 200 (537)
T ss_pred hcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHh
Confidence 4566899999999999999976 7 89999999886210 011 112211
Q ss_pred -HHHHHHHHHHHhhccC----CCCCceEEEEcCCCceEEEecCCCCchHHHH--HHHc-CCCCHHHHHHHHHH
Q 045250 80 -RAYFEALALKEHGKLC----PDHVPEVYHFDRTMSLIGMRYLEPPHIILRK--GLIA-GIKYPLLAEHMSEF 144 (165)
Q Consensus 80 -R~~~E~~~L~~~~~~~----p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~--~l~~-g~~~~~~a~~iG~~ 144 (165)
....|++.+..+.+.. .-+||++|.---...++|||++. + ..+.+ .+.+ |.....+|+.....
T Consensus 201 lD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~-G-~~l~d~~~l~~~g~d~~~la~~~v~~ 271 (537)
T PRK04750 201 LDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMY-G-IPVSDVAALRAAGTDMKLLAERGVEV 271 (537)
T ss_pred hCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeec-C-ccHHhHHHHHhcCCCHHHHHHHHHHH
Confidence 1234555555554432 23799999644678999999998 3 34433 2333 32224566554433
No 293
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=94.20 E-value=0.51 Score=37.04 Aligned_cols=103 Identities=12% Similarity=-0.043 Sum_probs=66.9
Q ss_pred eccCCceeEEEEEEeCC--C---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 39 EVGDGNLNFVYIVVGTS--G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~--g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
.+|.|....||++...+ + .+.||.-...... -...+...|...|+.+.. |..+.-. +.++ ....+
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~-~~~~~ 72 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS------DIMDDFLKEAAIMHSLDH--ENLIRLYGVVLT-HPLMM 72 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccH------HHHHHHHHHHHHHhhcCC--CCccceeEEEcC-CeEEE
Confidence 57889999999998643 2 4778876543321 234566778888877753 3322211 2344 67789
Q ss_pred EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ...|++.+.+.. .. ..++.++...|+.+|...
T Consensus 73 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 117 (257)
T cd05040 73 VTELAP--LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR 117 (257)
T ss_pred EEEecC--CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 457777776533 11 246678899999998764
No 294
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=94.19 E-value=0.69 Score=36.91 Aligned_cols=107 Identities=15% Similarity=0.065 Sum_probs=67.8
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~ 111 (165)
.++.+|.|....||++.+.+ | .+++|.-.... ....-.+....|.++|+.+.. |. ++++ ++.+.....
T Consensus 5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~ 76 (286)
T cd07846 5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESE-----DDKMVKKIAMREIRMLKQLRH--EN-LVNLIEVFRRKKRLY 76 (286)
T ss_pred EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhcc-----CcchhhHHHHHHHHHHHhcCC--cc-hhhHHHhcccCCeEE
Confidence 45778999999999999863 4 78888743211 112223445667788877643 22 2222 234667789
Q ss_pred EEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ ...+........ .. -.++.+|...|+-+|...
T Consensus 77 lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (286)
T cd07846 77 LVFEFVD--HTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN 120 (286)
T ss_pred EEEecCC--ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 345655443332 21 356778889999999765
No 295
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=94.19 E-value=1.1 Score=35.00 Aligned_cols=107 Identities=20% Similarity=0.120 Sum_probs=66.8
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
.+.++.|...-||++.+.. | .+++|.-... ... .-..++...|+..|+.+.. |..++-. ...+.....++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~-~~~----~~~~~~~~~E~~~l~~~~h--~~i~~~~~~~~~~~~~~lv 77 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLT-KMP----VKEKEASKKEVILLAKMKH--PNIVTFFASFQENGRLFIV 77 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHh-hcc----chhhHHHHHHHHHHHhCCC--CChhhhhheeccCCeEEEE
Confidence 4678888888999998863 4 7888863221 110 0123456678888877753 3322222 23355667899
Q ss_pred EecCCCCchHHHHHHHcCC--C-C----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGI--K-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~--~-~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ ...|.+.+.... . . -.++.++...|+-+|...
T Consensus 78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (257)
T cd08225 78 MEYCD--GGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK 121 (257)
T ss_pred EecCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 457777665432 1 1 246678888888888643
No 296
>PHA03209 serine/threonine kinase US3; Provisional
Probab=94.16 E-value=0.81 Score=38.65 Aligned_cols=98 Identities=14% Similarity=0.130 Sum_probs=66.3
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
.+..+|.|...-||++.... + .+++|.... .+...|+.+|+.+.. | .+++++ +.+.....
T Consensus 70 ~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-------------~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 70 VIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-------------GTTLIEAMLLQNVNH--P-SVIRMKDTLVSGAITC 133 (357)
T ss_pred EEEEecCCCCeEEEEEEECCCCceEEEEeCCc-------------cccHHHHHHHHhCCC--C-CCcChhheEEeCCeeE
Confidence 56788999999999998863 3 788886321 233568888887653 3 334443 44667788
Q ss_pred EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t 152 (165)
+|||++.. .+.+.+... ... -.++.+|...|+-+|...
T Consensus 134 lv~e~~~~---~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 177 (357)
T PHA03209 134 MVLPHYSS---DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR 177 (357)
T ss_pred EEEEccCC---cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999972 455555442 221 257788999999999764
No 297
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=94.15 E-value=1.8 Score=34.77 Aligned_cols=107 Identities=11% Similarity=-0.019 Sum_probs=66.1
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cC-----
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DR----- 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~----- 107 (165)
.+..+|.|....||++.+. +| .++||.-..... .... ..+...|.++|+.+.. |..++-.-.+ +.
T Consensus 16 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~----~~~~-~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 16 KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE----KEGF-PITALREIKILQLLKH--ENVVNLIEICRTKATPYN 88 (310)
T ss_pred EEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC----cCCc-hhHHHHHHHHHHhCCC--CCccceEEEEeccccccc
Confidence 5678999999999999876 45 788886432111 1111 1244568888877743 5444433222 22
Q ss_pred ---CCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 108 ---TMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 ---e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
....+|||+++. .+.+.+.... .. -.++.+|...|.-+|...
T Consensus 89 ~~~~~~~lv~e~~~~---~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 139 (310)
T cd07865 89 RYKGSFYLVFEFCEH---DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK 139 (310)
T ss_pred CCCceEEEEEcCCCc---CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 234899999983 4555555432 21 257788888999898764
No 298
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=94.11 E-value=1 Score=37.22 Aligned_cols=109 Identities=12% Similarity=0.026 Sum_probs=66.8
Q ss_pred EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCC-------CCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 045250 38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGE-------SWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFD 106 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~-------~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D 106 (165)
..+|.|....||++.+. .| .++||........... +..--..+...|.++|+.+.. |. ++.++ +.+
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~ 91 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH--EN-IMGLVDVYVE 91 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC--cc-eeeeeEEEec
Confidence 45888888899999876 45 7888875422110000 000111245667777877643 33 33333 346
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+...++||+++. .+.+.+...... ..++.+|...|..+|...
T Consensus 92 ~~~~~lv~e~~~~---~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~ 139 (335)
T PTZ00024 92 GDFINLVMDIMAS---DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY 139 (335)
T ss_pred CCcEEEEEecccc---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 6778899999972 566666543322 257888888999999765
No 299
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=94.08 E-value=0.92 Score=36.58 Aligned_cols=106 Identities=20% Similarity=0.173 Sum_probs=65.7
Q ss_pred eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250 36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D 106 (165)
-++.+|.|....||++... .+ .+.||.-.... . .-...+...|..+|+.+. .| ++++++. .+
T Consensus 10 i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~-~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~ 80 (288)
T cd05061 10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-----S-LRERIEFLNEASVMKGFT--CH-HVVRLLGVVSK 80 (288)
T ss_pred eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-----C-HHHHHHHHHHHHHHHhCC--CC-CeeeEEEEEcC
Confidence 4678999999999998642 12 57777522110 0 011234455767776664 24 4555553 45
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC---------------CHHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~---------------~~~~a~~iG~~La~~h~~t 152 (165)
.....+||||++ ..+|.+.+..... .-.++.+|...|+-+|...
T Consensus 81 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 139 (288)
T cd05061 81 GQPTLVVMELMA--HGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK 139 (288)
T ss_pred CCCcEEEEeCCC--CCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 667899999997 3477777754210 1247778888888888754
No 300
>PRK10345 hypothetical protein; Provisional
Probab=94.08 E-value=1.3 Score=35.41 Aligned_cols=108 Identities=13% Similarity=-0.019 Sum_probs=69.5
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhcc--CCCCCceEEEEcCCCc---
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKL--CPDHVPEVYHFDRTMS--- 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~--~p~~vP~v~~~D~e~~--- 110 (165)
+.+.||.|..-.||+ .-.++..+||...+.-. -..+....|...|+.+... .-.++|++|.+-.++.
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~~-------~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g 77 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQRCIKIVYHRGD-------GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG 77 (210)
T ss_pred CcceecCCCceEEEE-CCCCcCeEEEEEecccc-------chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence 457899999999996 32345557888754211 1336789999999988541 1245888887776663
Q ss_pred -e--EEEecCCCCchHHHHHHHcCCCCHH---HHHHHHHHHHHHHhc
Q 045250 111 -L--IGMRYLEPPHIILRKGLIAGIKYPL---LAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 -~--~vMEdl~~~~~~lr~~l~~g~~~~~---~a~~iG~~La~~h~~ 151 (165)
+ +|||+.+....+|.+.+.++...+. +.+.+-.++..+|..
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~ 124 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDN 124 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHC
Confidence 2 6799854336799999977653332 334444444566653
No 301
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=94.06 E-value=0.44 Score=38.92 Aligned_cols=107 Identities=15% Similarity=0.016 Sum_probs=65.4
Q ss_pred eeEeccCCceeEEEEEEeC-CC-----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~ 109 (165)
.++.+|.|....||++.+. +| .+++|...+- ..+-...+...|..+++.+.. |..+.-.-.+....
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~~~e~~~~~~l~h--~niv~~~~~~~~~~ 82 (303)
T cd05110 11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET------TGPKANVEFMDEALIMASMDH--PHLVRLLGVCLSPT 82 (303)
T ss_pred eccccccCCCccEEEEEEecCCCcceeeEEEEecccc------CCHHHHHHHHHHHHHHHhCCC--CCcccEEEEEcCCC
Confidence 5567999999999999864 33 2455654321 112222344556666665532 44444443444556
Q ss_pred ceEEEecCCCCchHHHHHHHcCC--C----CHHHHHHHHHHHHHHHhcc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGI--K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~--~----~~~~a~~iG~~La~~h~~t 152 (165)
..++||+++ . ..+.+.+.... . .-.++.++...|+-+|...
T Consensus 83 ~~~v~e~~~-~-g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 129 (303)
T cd05110 83 IQLVTQLMP-H-GCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 129 (303)
T ss_pred ceeeehhcC-C-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 779999998 3 35666665532 1 1356788999999999764
No 302
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=94.04 E-value=1.2 Score=36.55 Aligned_cols=108 Identities=12% Similarity=0.063 Sum_probs=65.6
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
....+|.|...-||++.+. +| .+++|.-...... ..-...+...|.+.|+.+.. |..++-. ++.+.+...+
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~l 98 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ----TNEKWQDIIKEVKFLQQLKH--PNTIEYKGCYLKEHTAWL 98 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccC----chHHHHHHHHHHHHHHhCCC--CCCccEEEEEEeCCEEEE
Confidence 4567999999999999875 44 6777755322111 11122355667777777642 3333222 2346677889
Q ss_pred EEecCCCCchHHHHHHHc-CCC-C----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIA-GIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~-g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
|||++++ .+-+.+.. +.. . -.++.+|...|+-+|...
T Consensus 99 v~e~~~~---~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g 141 (313)
T cd06633 99 VMEYCLG---SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN 141 (313)
T ss_pred EEecCCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999973 23333332 222 1 136678888888898765
No 303
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=94.03 E-value=0.65 Score=38.18 Aligned_cols=105 Identities=14% Similarity=0.102 Sum_probs=69.5
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC----
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT---- 108 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e---- 108 (165)
.+.+|.|....||++.+.+ | .++||.-.+.... .....+...|.++|+.+. .|..++ ++.+ +.+
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----~~~~~~~~~e~~~l~~l~--~~~i~~-~~~~~~~~~~~~~ 76 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDD-----LIDAKRILREIKLLRHLR--HENIIG-LLDILRPPSPEDF 76 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeecccccc-----chhhhhHHHHHHHHHhcC--Ccchhh-hhhhhcccCcccc
Confidence 4568888889999999864 5 8899976543321 233457777888888775 233222 2222 222
Q ss_pred -CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 109 -MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 -~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...++||+++ . .+.+.+.++... -.++.+|...|+-+|...
T Consensus 77 ~~~~lv~e~~~-~--~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~g 123 (330)
T cd07834 77 NDVYIVTELME-T--DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSAN 123 (330)
T ss_pred cceEEEecchh-h--hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4579999998 2 577777665332 247788888999898765
No 304
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=94.01 E-value=1 Score=35.93 Aligned_cols=105 Identities=14% Similarity=0.038 Sum_probs=65.8
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------- 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------- 106 (165)
-++.+|.|....||++.+. .+ .+++|.....- ....+...|..+++.+... ..+.+++.+-
T Consensus 20 ~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--------~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 20 LVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--------DEEEEIKLEINMLKKYSHH--RNIATYYGAFIKKSPPG 89 (282)
T ss_pred hheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--------HHHHHHHHHHHHHHHhcCC--CcEEEEeeehhcccccC
Confidence 3578899999999999885 34 78888642110 1224566677777776432 2334444332
Q ss_pred -CCCceEEEecCCCCchHHHHHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 045250 107 -RTMSLIGMRYLEPPHIILRKGLIAG--I-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 -~e~~~~vMEdl~~~~~~lr~~l~~g--~-~~----~~~a~~iG~~La~~h~~t 152 (165)
.+...++|||++ ...+...+... . .. -.++.+|...|+.+|...
T Consensus 90 ~~~~~~iv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 141 (282)
T cd06636 90 HDDQLWLVMEFCG--AGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK 141 (282)
T ss_pred CCCEEEEEEEeCC--CCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 345579999998 34565555432 2 22 135678999999999764
No 305
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=94.01 E-value=0.81 Score=45.00 Aligned_cols=107 Identities=16% Similarity=0.137 Sum_probs=67.6
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcC--CCc
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDR--TMS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~--e~~ 110 (165)
-+..||.|....||++.+.. + .+++|.-.... .. .-...+...|..+|+.+.. |..++-+-. ++. ...
T Consensus 17 Il~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~-l~----e~~~~~~~~EI~IL~~L~H--PNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 17 VIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG-LK----EREKSQLVIEVNVMRELKH--KNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred EEEEEecCCCeEEEEEEECCCCeEEEEEEEeccc-cC----HHHHHHHHHHHHHHHHcCC--CCcCeEEEEEEecCCCEE
Confidence 56789999999999999864 3 56777543211 10 0123566778888887753 444433222 233 336
Q ss_pred eEEEecCCCCchHHHHHHHc-----CCCC----HHHHHHHHHHHHHHHhc
Q 045250 111 LIGMRYLEPPHIILRKGLIA-----GIKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~-----g~~~----~~~a~~iG~~La~~h~~ 151 (165)
.+||||++ ...|.+.|.. +.+. -.++.+|...|+-+|..
T Consensus 90 yIVMEY~~--gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~ 137 (1021)
T PTZ00266 90 YILMEFCD--AGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNL 137 (1021)
T ss_pred EEEEeCCC--CCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 79999998 3466555543 2232 25778899999999974
No 306
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=93.99 E-value=0.77 Score=36.50 Aligned_cols=104 Identities=15% Similarity=0.077 Sum_probs=66.5
Q ss_pred eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcC
Q 045250 37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~ 107 (165)
.+.+|.|....||++... ++ .++||.-.... ..-...+...|+++|+.+.. |. +.++ ++.+.
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~ 80 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA------SNDARKDFEREAELLTNFQH--EN-IVKFYGVCTEG 80 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccC------CHHHHHHHHHHHHHHHhcCC--CC-chheeeEEecC
Confidence 456888888899998753 22 68888643211 11123567778888887643 33 3333 34455
Q ss_pred CCceEEEecCCCCchHHHHHHHcCC---------------C----CHHHHHHHHHHHHHHHhc
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIAGI---------------K----YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~g~---------------~----~~~~a~~iG~~La~~h~~ 151 (165)
....++||+++ ..+|++.+.... . .-.++.+|...|+.+|..
T Consensus 81 ~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~ 141 (280)
T cd05049 81 DPPIMVFEYME--HGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ 141 (280)
T ss_pred CCeEEEEecCC--CCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC
Confidence 77899999998 357877775421 1 124677888888888864
No 307
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=93.96 E-value=0.33 Score=38.50 Aligned_cols=103 Identities=12% Similarity=0.028 Sum_probs=61.5
Q ss_pred eccCCceeEEEEEEeCC-C--------eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 045250 39 EVGDGNLNFVYIVVGTS-G--------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRT 108 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~-g--------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e 108 (165)
.+|.|....||++.... + .+++|....-. .-..++...|...|+.... |..+.-. ++.+.+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~~~h--~~iv~~~~~~~~~~ 72 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-------RNYSESFFEAASMMSQLSH--KHLVLNYGVCVCGD 72 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchh-------HHHHHHHHHHHHHHHhCCC--CChhheeeEEEeCC
Confidence 57888889999997642 1 24444432111 1112344556666665432 3333222 344557
Q ss_pred CceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t 152 (165)
...+||||++ ...|.+.+..+.. . -.++.+|...|+-+|...
T Consensus 73 ~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (258)
T cd05078 73 ESIMVQEYVK--FGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG 120 (258)
T ss_pred CcEEEEecCC--CCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 8899999998 3577777765431 1 246788889999888654
No 308
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=93.93 E-value=0.51 Score=38.26 Aligned_cols=106 Identities=16% Similarity=0.154 Sum_probs=64.8
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
-++.+|.|...-||++...+ | .++||+-.... ..-...+...|.+.+..... .|. +++++ +.+.....
T Consensus 19 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~------~~~~~~~~~~e~~~~~~~~~-~~~-i~~~~~~~~~~~~~~ 90 (296)
T cd06618 19 NLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG------NKEENKRILMDLDVVLKSHD-CPY-IVKCYGYFITDSDVF 90 (296)
T ss_pred eeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC------ChHHHHHHHHHHHHHHhccC-CCc-hHhhheeeecCCeEE
Confidence 57789999999999999874 5 78888754211 11223344555555544432 233 33333 33667788
Q ss_pred EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHh
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~ 150 (165)
++||+++.....++.... +... -.++.+|...|+-+|.
T Consensus 91 ~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~ 132 (296)
T cd06618 91 ICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKE 132 (296)
T ss_pred EEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999743334443322 2221 2578888999999995
No 309
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=93.86 E-value=0.96 Score=35.74 Aligned_cols=106 Identities=14% Similarity=0.016 Sum_probs=66.6
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
-.+.+|.|....||++.+. ++ .+++|.-..... -.......|..+++.+.. |..++-. .+.+.+...+
T Consensus 13 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~e~~~~~~l~h--~~ii~~~~~~~~~~~~~l 83 (267)
T cd06645 13 LIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-------EDFAVVQQEIIMMKDCKH--SNIVAYFGSYLRRDKLWI 83 (267)
T ss_pred HHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-------hHHHHHHHHHHHHHhCCC--CCeeeEEEEEEeCCEEEE
Confidence 3456788888899999875 35 788887542211 122345567777776632 3332222 2346677889
Q ss_pred EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ..+|.+.+..... . -.++.++...|.-+|...
T Consensus 84 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 126 (267)
T cd06645 84 CMEFCG--GGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG 126 (267)
T ss_pred EEeccC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 4577776654332 2 246677788888888653
No 310
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=93.81 E-value=1.2 Score=35.83 Aligned_cols=107 Identities=19% Similarity=0.162 Sum_probs=65.8
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC----
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRT---- 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e---- 108 (165)
-++.+|.|....||++... ++ .++||.-...... . ....+...|.++|+.+.. |..++-. +..+..
T Consensus 12 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~---~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 12 ILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--D---GFPITALREIKILKKLKH--PNVVPLIDMAVERPDKSK 84 (311)
T ss_pred EEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC--C---CcchhHHHHHHHHHhcCC--CCccchhhheeccccccc
Confidence 4567999999999999875 44 7899986544321 1 112345668888887743 4333321 122222
Q ss_pred ----CceEEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 109 ----MSLIGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ----~~~~vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...++|||.+. .+...+... ..+ ..++.+|...|+-+|...
T Consensus 85 ~~~~~~~lv~~~~~~---~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~ 135 (311)
T cd07866 85 RKRGSVYMVTPYMDH---DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH 135 (311)
T ss_pred ccCceEEEEEecCCc---CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 34899999972 355555432 222 246778888888898754
No 311
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=93.79 E-value=1.5 Score=35.09 Aligned_cols=106 Identities=18% Similarity=0.069 Sum_probs=66.6
Q ss_pred eeEeccCCceeEEEEEEe-----CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250 36 TIKEVGDGNLNFVYIVVG-----TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~ 107 (165)
.++.+|.|...-||++.. .++ .+++|.-..... .....+...|.++|+.+.. | .+++++.+ +.
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~ 78 (283)
T cd05080 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG------QQNTSGWKKEINILKTLYH--E-NIVKYKGCCSEQ 78 (283)
T ss_pred eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC------hHHHHHHHHHHHHHHhCCC--C-CEeeEEEEEecC
Confidence 467789898888987642 234 688887543211 1223455668788877642 3 44555543 22
Q ss_pred --CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 108 --TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 --e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
....++||+++ ...|.+.+..+.... .++.++...|..+|...
T Consensus 79 ~~~~~~lv~e~~~--~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~ 127 (283)
T cd05080 79 GGKGLQLIMEYVP--LGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQH 127 (283)
T ss_pred CCceEEEEecCCC--CCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23569999997 457777776655432 46777888888888654
No 312
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=93.77 E-value=0.48 Score=36.94 Aligned_cols=103 Identities=18% Similarity=0.129 Sum_probs=62.1
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCC-CChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC--C
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWP-MTKERAYFEALALKEHGKLCPDHVPEVYH--FDRT--M 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~-l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e--~ 109 (165)
...+|.|...-||++.+. +| .+++|.-.. ..+. -..++...|...|+.+.. ..+++++. .+.. .
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~------~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~ 75 (265)
T cd08217 5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDY------GNMTEKEKQQLVSEVNILRELKH---PNIVRYYDRIIDRSNQT 75 (265)
T ss_pred eeeeccCCCeEEEEeeecCCCCEEEEEEEec------ccCCHHHHHHHHHHHHHHHhcCC---CccceeeeeeecCCCCE
Confidence 356888988899999876 44 688885321 1111 112345556666665543 34555544 3322 3
Q ss_pred ceEEEecCCCCchHHHHHHHc----CCC-C----HHHHHHHHHHHHHHHh
Q 045250 110 SLIGMRYLEPPHIILRKGLIA----GIK-Y----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~----g~~-~----~~~a~~iG~~La~~h~ 150 (165)
..++|||++ ..+|.+.+.. +.. . -.++.+|...|+.+|.
T Consensus 76 ~~~~~e~~~--~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~ 123 (265)
T cd08217 76 LYIVMEYCE--GGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHN 123 (265)
T ss_pred EEEEehhcc--CCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 468999998 3366655543 222 1 2477889999999993
No 313
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=93.72 E-value=1.1 Score=37.36 Aligned_cols=104 Identities=15% Similarity=0.175 Sum_probs=65.8
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-------- 105 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------- 105 (165)
.+++||.|....||++.+. +| .+++|.-...- . -..+....|.++|+.+.. |. +.+++.+
T Consensus 9 ~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~----~---~~~~~~~~Ei~~l~~l~h--~~-i~~~~~~~~~~~~~~ 78 (342)
T cd07854 9 DLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD----P---QSVKHALREIKIIRRLDH--DN-IVKVYEVLGPSGSDL 78 (342)
T ss_pred EEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC----C---chHHHHHHHHHHHHhcCC--Cc-chhhHhhhccccccc
Confidence 5788999999999999875 45 78888642111 1 122445567888877643 32 2322211
Q ss_pred --------cCCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 106 --------DRTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 --------D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
+.....+|||+++ . .+++.+..+.... .++.+|...|.-+|...
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~-~--~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g 134 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYME-T--DLANVLEQGPLSEEHARLFMYQLLRGLKYIHSAN 134 (342)
T ss_pred ccccccccccceEEEEeeccc-c--cHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1124569999997 2 6777776665432 45678888888888654
No 314
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=93.65 E-value=1.1 Score=35.91 Aligned_cols=104 Identities=14% Similarity=0.097 Sum_probs=65.3
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
+.++|.|...-||++.+.. + .+++|.-.... .-...+...|.+.|+.+.. |. +++++ +.+.....+
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h--~~-ii~~~~~~~~~~~~~~ 79 (282)
T cd06643 10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-------EEELEDYMVEIDILASCDH--PN-IVKLLDAFYYENNLWI 79 (282)
T ss_pred HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-------HHHHHHHHHHHHHHHHCCC--CC-eeeEEEEEeeCCEEEE
Confidence 3558888889999998864 4 45555542111 0123455667777776642 33 33343 556778889
Q ss_pred EEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t 152 (165)
||||++ + ..+...+.+ +... ..++.+|...|+-+|...
T Consensus 80 v~e~~~-~-~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ 123 (282)
T cd06643 80 LIEFCA-G-GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK 123 (282)
T ss_pred EEEecC-C-CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 3 366665543 2222 347778888899898754
No 315
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=93.64 E-value=0.74 Score=36.32 Aligned_cols=107 Identities=13% Similarity=0.111 Sum_probs=64.8
Q ss_pred EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEEE
Q 045250 38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP-EVYHFDRTMSLIGM 114 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~e~~~~vM 114 (165)
+.+|.|...-||++... +| .++||.-...-.. . .-...+...|...|+.+.. |..++ .-++.+.....++|
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~-~---~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM-D---AKARADCIKEIDLLKQLNH--PNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhh-h---HHHHHHHHHHHHHHHHccC--CchhhhhheeEeCCeEEEEE
Confidence 56888888899999864 45 8889954321110 0 0112355567777776642 32222 12344667788999
Q ss_pred ecCCCCchHHHHHHHc----CCCCH-----HHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIA----GIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~----g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
|+++ ...|++.+.. +...+ .++.+|...|+-+|...
T Consensus 82 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 126 (267)
T cd08229 82 ELAD--AGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR 126 (267)
T ss_pred EecC--CCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9998 3466665542 22221 45778899999999654
No 316
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=93.64 E-value=0.99 Score=35.77 Aligned_cols=111 Identities=15% Similarity=0.105 Sum_probs=66.4
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCcccccc-C--CCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCI-G--ESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTM 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~-~--~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~ 109 (165)
.+.+|.|...-||++... +| .++||+-..-.... . ..+.--.+....|...|+.+.. | .+++++.+ +.+.
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~ 82 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH--L-NIVQYLGFETTEEY 82 (272)
T ss_pred cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC--C-CcceEEEEeccCCc
Confidence 457899999999999764 45 78888653221110 0 0011112344557777766642 3 34444433 4466
Q ss_pred ceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t 152 (165)
..+|||+++ ...|.+.+.+...+ . .++.+|...|.-+|...
T Consensus 83 ~~lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 128 (272)
T cd06629 83 LSIFLEYVP--GGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKG 128 (272)
T ss_pred eEEEEecCC--CCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 789999998 34676666553322 2 35677888888888654
No 317
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=93.58 E-value=1 Score=42.00 Aligned_cols=108 Identities=13% Similarity=-0.035 Sum_probs=68.3
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
-++.||.|....||++.+. .+ .++||.-...-.. -.-...+...|...|+.+.. |.. +.++ +.+.....
T Consensus 8 i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~~~~~~~~~~E~~~l~~l~h--p~I-v~~~~~~~~~~~~~ 80 (669)
T cd05610 8 IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----NKNMVHQVQAERDALALSKS--PFI-VHLYYSLQSANNVY 80 (669)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----CHHHHHHHHHHHHHHHhcCC--CCc-CeEEEEEEECCEEE
Confidence 4678999999999999987 34 7889974321100 01112456667777765532 333 3333 23456788
Q ss_pred EEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
+||||+. +..|++.+..... . -.++.+|...|.-+|...
T Consensus 81 lVmEy~~--g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~g 124 (669)
T cd05610 81 LVMEYLI--GGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG 124 (669)
T ss_pred EEEeCCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 3567776654322 1 256778888888888763
No 318
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=93.58 E-value=2.3 Score=33.61 Aligned_cols=106 Identities=15% Similarity=-0.001 Sum_probs=66.1
Q ss_pred eeEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 045250 36 TIKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e 108 (165)
-.+.+|.|....||++.... . .++||...+... .....+...|..+|+.+.. | .+.+++. .+.+
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~ 78 (266)
T cd05033 8 IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS------DKQRLDFLTEASIMGQFDH--P-NIIRLEGVVTKSR 78 (266)
T ss_pred eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC------hHHHHHHHHHHHHHHhCCC--C-CcceEeEEEecCC
Confidence 35778999999999998642 2 688887543211 1122344557777766642 3 3444443 3556
Q ss_pred CceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
...++||+++ ..+|.+.+... ... -.++.++...|+.+|...
T Consensus 79 ~~~iv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~ 126 (266)
T cd05033 79 PVMIITEYME--NGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN 126 (266)
T ss_pred ceEEEEEcCC--CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 6789999998 34777766542 222 245677788888888743
No 319
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=93.57 E-value=0.66 Score=38.82 Aligned_cols=85 Identities=13% Similarity=0.028 Sum_probs=52.3
Q ss_pred eeEeccCCceeEEEEEEe------CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-E-c
Q 045250 36 TIKEVGDGNLNFVYIVVG------TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-F-D 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~-D 106 (165)
-.+.||.|....||++.. .++ .+.||+-...... -...+...|.+.|+.+... |. +++++. + +
T Consensus 11 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~E~~~l~~l~~h-~n-iv~~~~~~~~ 82 (343)
T cd05103 11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH------SEHRALMSELKILIHIGHH-LN-VVNLLGACTK 82 (343)
T ss_pred ccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh------HHHHHHHHHHHHHHhccCC-cc-Hhhhcceeec
Confidence 467799999999999963 234 6888976422110 1124566788888777542 33 333332 2 2
Q ss_pred C-CCceEEEecCCCCchHHHHHHHc
Q 045250 107 R-TMSLIGMRYLEPPHIILRKGLIA 130 (165)
Q Consensus 107 ~-e~~~~vMEdl~~~~~~lr~~l~~ 130 (165)
+ ....++|||++ ..+|.+.+..
T Consensus 83 ~~~~~~lv~ey~~--~g~L~~~i~~ 105 (343)
T cd05103 83 PGGPLMVIVEFCK--FGNLSNYLRS 105 (343)
T ss_pred CCCceEEEEeccC--CCcHHHHHHh
Confidence 3 34578999998 3466666543
No 320
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=93.54 E-value=1 Score=35.91 Aligned_cols=106 Identities=15% Similarity=0.055 Sum_probs=66.0
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP-EVYHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~e~~~~v 113 (165)
++.+|.|...-||++.+. +| .+++|.-..... .. ....+...|.+.|+.+.. |..++ .-++.|.....++
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~--~~---~~~~~~~~ei~~l~~l~h--~~i~~~~~~~~~~~~~~lv 77 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DE---GVPSSALREICLLKELKH--KNIVRLYDVLHSDKKLTLV 77 (284)
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeecccc--cc---cCccchhHHHHHHHhcCC--CCeeeHHHHhccCCceEEE
Confidence 467899999999999885 45 788886543211 11 112344568888877743 32221 1123466778899
Q ss_pred EecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t 152 (165)
||+++ . .+.+.+.. +... ..++.+|...|+-+|...
T Consensus 78 ~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 119 (284)
T cd07839 78 FEYCD-Q--DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN 119 (284)
T ss_pred EecCC-C--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 2 45555543 2322 356778888888888654
No 321
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=93.53 E-value=0.58 Score=36.39 Aligned_cols=104 Identities=14% Similarity=0.014 Sum_probs=65.6
Q ss_pred ccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 045250 40 VGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMRY 116 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vMEd 116 (165)
+|.|...-||++...+ + .+++|.-....-. -....++...|..+|+.+. .|..++-. .+-+.....++||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~v~e~ 74 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKII----KRKEVEHTLTERNILSRIN--HPFIVKLHYAFQTEEKLYLVLEY 74 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhc----chHHHHHHHHHHHHHHHcC--CCcHHHHHHHeecCCeeEEEEec
Confidence 4677777899998763 4 7888864322110 0124567888888888776 24333322 12355667999999
Q ss_pred CCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhc
Q 045250 117 LEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 117 l~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~ 151 (165)
++ ..+|.+.+..... . ..++.++...|.-+|..
T Consensus 75 ~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~ 112 (250)
T cd05123 75 AP--GGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSL 112 (250)
T ss_pred CC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 97 3477777766532 2 24566778888888763
No 322
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=93.53 E-value=1.5 Score=34.12 Aligned_cols=102 Identities=17% Similarity=0.087 Sum_probs=67.1
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
.+.++.|..--||++...+ + .+++|.-.... ..++...|.+.++.+.. |..++-. ++.+.....++
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------~~~~~~~e~~~~~~l~~--~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE---------DLQEIIKEISILKQCDS--PYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH---------HHHHHHHHHHHHHhCCC--CcEeeeeeeeecCCcEEEE
Confidence 4457888888899998864 4 78888643211 15677788888887722 3333222 34566778899
Q ss_pred EecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhc
Q 045250 114 MRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
||+++ ...|++.+.. +... -.++.++...|+-+|..
T Consensus 77 ~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~ 118 (256)
T cd06612 77 MEYCG--AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN 118 (256)
T ss_pred EecCC--CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 99998 4577777653 3222 25777888888888854
No 323
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=93.51 E-value=2.1 Score=34.52 Aligned_cols=105 Identities=15% Similarity=0.085 Sum_probs=65.9
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
-++.+|.|...-||++.+.. + .+++|.-...-. -...+...|...++.+.. | .+++++ +.+.....
T Consensus 16 i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~ 85 (292)
T cd06644 16 IIGELGDGAFGKVYKAKNKETGALAAAKVIETKSE-------EELEDYMVEIEILATCNH--P-YIVKLLGAFYWDGKLW 85 (292)
T ss_pred hhheecCCCCeEEEEEEECCCCceEEEEEeccCCH-------HHHHHHHHHHHHHHhCCC--C-cEeeeEEEEEeCCeEE
Confidence 36679999999999998864 5 677777542211 113455567777766542 3 344444 34667789
Q ss_pred EEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ ...+...+.+. ... -.++.+|...|+-+|...
T Consensus 86 lv~e~~~--~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ 130 (292)
T cd06644 86 IMIEFCP--GGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK 130 (292)
T ss_pred EEEecCC--CCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999998 33555544432 222 246777788888888643
No 324
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=93.50 E-value=1.2 Score=36.50 Aligned_cols=107 Identities=15% Similarity=-0.002 Sum_probs=69.5
Q ss_pred eeEeccCCceeEEEEEEeC--------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--
Q 045250 36 TIKEVGDGNLNFVYIVVGT--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-- 104 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-- 104 (165)
-...+|.|....||++... .+ .+.+|....... .-...+...|.+.|+.+... | .+.+++.
T Consensus 16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~-~iv~~~~~~ 87 (314)
T cd05099 16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT------DKDLADLISEMELMKLIGKH-K-NIINLLGVC 87 (314)
T ss_pred eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC------hHHHHHHHHHHHHHHhccCC-C-CeeeEEEEE
Confidence 5678999999999999742 12 577887553221 11234666787777766443 4 3444543
Q ss_pred EcCCCceEEEecCCCCchHHHHHHHcCC----------------CC-----HHHHHHHHHHHHHHHhcc
Q 045250 105 FDRTMSLIGMRYLEPPHIILRKGLIAGI----------------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 105 ~D~e~~~~vMEdl~~~~~~lr~~l~~g~----------------~~-----~~~a~~iG~~La~~h~~t 152 (165)
.+.....++|||++ ...|.+.+.... .. -.++.+|...|..+|...
T Consensus 88 ~~~~~~~lv~e~~~--~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g 154 (314)
T cd05099 88 TQEGPLYVIVEYAA--KGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR 154 (314)
T ss_pred ccCCceEEEEecCC--CCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 35566789999998 347777775532 11 136778999999999754
No 325
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=93.50 E-value=1.3 Score=35.67 Aligned_cols=110 Identities=12% Similarity=-0.084 Sum_probs=60.2
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~ 112 (165)
.++.+|.|....||++... +| .+.+|.+.-..... . -.-...+...|...++... -|. +.+++. +......+
T Consensus 11 ~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~-~~~~~~~~~~~~~~l~~l~--h~~-iv~~~~~~~~~~~~~ 85 (279)
T cd05111 11 KLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-S-GRQTFQEITDHMLAMGSLD--HAY-IVRLLGICPGASLQL 85 (279)
T ss_pred eccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-c-chHHHHHHHHHHHHHhcCC--CCC-cceEEEEECCCccEE
Confidence 4567999999999999864 33 33333332222210 0 0011122222333333221 243 444443 34455678
Q ss_pred EEecCCCCchHHHHHHHcC-C-CC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAG-I-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g-~-~~----~~~a~~iG~~La~~h~~t 152 (165)
+||+++ ..+|.+.+... . .. -.++.+|...|+-+|...
T Consensus 86 i~e~~~--~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 129 (279)
T cd05111 86 VTQLSP--LGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR 129 (279)
T ss_pred EEEeCC--CCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999998 34777777542 2 22 257889999999999754
No 326
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=93.50 E-value=1.2 Score=36.95 Aligned_cols=108 Identities=14% Similarity=0.011 Sum_probs=63.1
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
-++.||.|....||++.... + .+.+|.-...-.. . .........|...|+.... | .++.++ +.+.+...
T Consensus 5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~---~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~~~~~~ 77 (332)
T cd05623 5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-K---RAETACFREERDVLVNGDN--Q-WITTLHYAFQDENNLY 77 (332)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-H---hhHHHHHHHHHHHHhhCCC--C-CEeeEEEEEecCCEEE
Confidence 36789999999999998764 3 6777864321110 0 0112233445555544322 3 333333 33556678
Q ss_pred EEEecCCCCchHHHHHHHcC-CCC-H----HHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAG-IKY-P----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g-~~~-~----~~a~~iG~~La~~h~~t 152 (165)
+||||++ ...|.+.+.+. ..+ . .++.+|...|.-+|...
T Consensus 78 lv~ey~~--~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ 122 (332)
T cd05623 78 LVMDYYV--GGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH 122 (332)
T ss_pred EEEeccC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 34777777652 222 2 35567777788777643
No 327
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=93.47 E-value=0.64 Score=41.93 Aligned_cols=102 Identities=21% Similarity=0.152 Sum_probs=71.8
Q ss_pred eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEE
Q 045250 37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT--MSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e--~~~~v 113 (165)
+++||.|+.--||....... +|-+|.-.+- .++.+-...|+.+|+.+.- ..+-++|..=.. .--||
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~--------~m~~~~f~~Ea~iMk~L~H---~~lV~l~gV~~~~~piyIV 279 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEG--------SMSPEAFLREAQIMKKLRH---EKLVKLYGVCTKQEPIYIV 279 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEecc--------ccChhHHHHHHHHHHhCcc---cCeEEEEEEEecCCceEEE
Confidence 56799999999999988755 6777765543 3555666689999987755 223444444333 35899
Q ss_pred EecCCCCchHHHHHHHc--CCC-----CHHHHHHHHHHHHHHHhc
Q 045250 114 MRYLEPPHIILRKGLIA--GIK-----YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~--g~~-----~~~~a~~iG~~La~~h~~ 151 (165)
|||++ ...|++.|.. |.. .-.+|.||+.-|+-+...
T Consensus 280 tE~m~--~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~ 322 (468)
T KOG0197|consen 280 TEYMP--KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK 322 (468)
T ss_pred EEecc--cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC
Confidence 99999 4589999987 332 237899998888776554
No 328
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=93.39 E-value=1.3 Score=38.59 Aligned_cols=103 Identities=18% Similarity=-0.000 Sum_probs=72.7
Q ss_pred ccCCceeEEEEEEeCCCe-EEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC---CceEEEe
Q 045250 40 VGDGNLNFVYIVVGTSGS-FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT---MSLIGMR 115 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~~gs-vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e---~~~~vME 115 (165)
+|.|..-.||+..-.... +.||...+--... .. ..+.+.|+.+|+.++- |..|. ++..=.+ ...+|||
T Consensus 49 iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~-~~----~~~f~~E~~il~~l~H--pNIV~-f~G~~~~~~~~~~iVtE 120 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWRGTDVVAVKIISDPDFDD-ES----RKAFRREASLLSRLRH--PNIVQ-FYGACTSPPGSLCIVTE 120 (362)
T ss_pred cccCCceeEEEEEeCCceeEEEEEecchhcCh-HH----HHHHHHHHHHHHhCCC--CCeee-EEEEEcCCCCceEEEEE
Confidence 888999999999877545 8888877665531 22 7788889988887443 44443 5555444 3689999
Q ss_pred cCCCCchHHHHHHHc---CCCCH----HHHHHHHHHHHHHHhcc
Q 045250 116 YLEPPHIILRKGLIA---GIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 116 dl~~~~~~lr~~l~~---g~~~~----~~a~~iG~~La~~h~~t 152 (165)
|++ ...|++.|.. +...+ .+|.+|++-|--+|...
T Consensus 121 y~~--~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~ 162 (362)
T KOG0192|consen 121 YMP--GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEG 162 (362)
T ss_pred eCC--CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 999 3588888866 33333 57888888777777765
No 329
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=93.32 E-value=1.5 Score=34.76 Aligned_cols=106 Identities=20% Similarity=0.151 Sum_probs=65.9
Q ss_pred eeEeccCCceeEEEEEEeCC------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250 36 TIKEVGDGNLNFVYIVVGTS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D 106 (165)
-...+|.|....||++...+ + .+++|.-..... .........|...|+.+.. | .+.+++. .+
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~------~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~ 80 (277)
T cd05032 10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS------MRERIEFLNEASVMKEFNC--H-HVVRLLGVVST 80 (277)
T ss_pred EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC------HHHHHHHHHHHHHHHhCCC--C-ceeEEEEEEcC
Confidence 45778999999999988642 2 688888432111 1112344556666665532 3 3444543 46
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC-----------C----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIK-----------Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~-----------~----~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++ ..+|.+.+.+... . -.++.+|...|.-+|...
T Consensus 81 ~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 139 (277)
T cd05032 81 GQPTLVVMELMA--KGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK 139 (277)
T ss_pred CCCcEEEEecCC--CCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 677899999997 3477776654211 1 236778888888888643
No 330
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=93.21 E-value=0.71 Score=36.97 Aligned_cols=103 Identities=18% Similarity=0.191 Sum_probs=65.6
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
++.+|.|....||++.+. .| .+++|.-..... .....+...|.++|+.+.. |. +++++ +.+.....+
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~e~~~l~~~~~--~~-i~~~~~~~~~~~~~~l 76 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD------ESKFNQIIMELDILHKAVS--PY-IVDFYGAFFIEGAVYM 76 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHhcCC--Cc-HHhhhhheecCCeEEE
Confidence 456889999999999886 45 788886532111 0112456668888876642 22 22222 345677789
Q ss_pred EEecCCCCchHHHHHHHcC----CCC----HHHHHHHHHHHHHHHh
Q 045250 113 GMRYLEPPHIILRKGLIAG----IKY----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g----~~~----~~~a~~iG~~La~~h~ 150 (165)
|||+++ +..|.+.+..+ ... -.++.+|...|..+|.
T Consensus 77 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 120 (286)
T cd06622 77 CMEYMD--AGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE 120 (286)
T ss_pred EEeecC--CCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999998 34676666554 221 3567778888888884
No 331
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=93.16 E-value=1.3 Score=35.25 Aligned_cols=106 Identities=20% Similarity=0.172 Sum_probs=63.8
Q ss_pred eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 045250 36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D 106 (165)
-...+|.|....||++... .+ .+.||.-..- ..+ -...+...|..+|+.+. .|. +++++.+ +
T Consensus 10 ~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-----~~~-~~~~~~~~e~~~l~~l~--~~~-iv~~~~~~~~ 80 (277)
T cd05062 10 MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-----ASM-RERIEFLNEASVMKEFN--CHH-VVRLLGVVSQ 80 (277)
T ss_pred eeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-----CCH-HHHHHHHHHHHHHHhCC--CCC-eeeEEEEEcC
Confidence 3567899999999987643 23 5888853211 111 11223455666666553 243 4445543 4
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCC---------------CHHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~---------------~~~~a~~iG~~La~~h~~t 152 (165)
.....+||||++ ..+|.+.+.+... .-.++.++...|+.+|...
T Consensus 81 ~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 139 (277)
T cd05062 81 GQPTLVIMELMT--RGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK 139 (277)
T ss_pred CCCeEEEEecCC--CCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 456789999998 3467666654211 1246778899999999754
No 332
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=93.13 E-value=0.91 Score=36.45 Aligned_cols=105 Identities=16% Similarity=0.101 Sum_probs=65.4
Q ss_pred eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 045250 36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D 106 (165)
-..++|.|....||++... ++ .+.+|+-..... ........|.+.|+.+.. | ++.+++ ..+
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~ 78 (280)
T cd05092 9 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-------SARQDFQREAELLTVLQH--Q-HIVRFYGVCTE 78 (280)
T ss_pred eccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH-------HHHHHHHHHHHHHhcCCC--C-CCceEEEEEec
Confidence 4677888999999999632 23 566776332111 123456667777776643 3 333444 345
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGI----------------KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~----------------~~----~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++ ...|.+.+.... .. -.++.+|...|+-+|...
T Consensus 79 ~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~ 142 (280)
T cd05092 79 GRPLLMVFEYMR--HGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH 142 (280)
T ss_pred CCceEEEEecCC--CCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 577889999998 347777665432 11 246678888888888654
No 333
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=93.07 E-value=0.76 Score=39.23 Aligned_cols=84 Identities=15% Similarity=0.017 Sum_probs=52.5
Q ss_pred eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250 36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D 106 (165)
-.+.+|.|....||++... ++ .+.||....... .-..++...|.++|+.+... |. +++++. .+
T Consensus 42 ~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~il~~l~~h-~n-Iv~~~~~~~~ 113 (374)
T cd05106 42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH------TDEREALMSELKILSHLGQH-KN-IVNLLGACTH 113 (374)
T ss_pred ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC------HHHHHHHHHHHHHHHhhccC-Cc-eeeEeeEecC
Confidence 4678999999999998742 22 577777653221 11235667788888776432 33 344443 34
Q ss_pred CCCceEEEecCCCCchHHHHHHH
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLI 129 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~ 129 (165)
.....+||||++ . .+|.+.+.
T Consensus 114 ~~~~~lv~ey~~-~-g~L~~~l~ 134 (374)
T cd05106 114 GGPVLVITEYCC-Y-GDLLNFLR 134 (374)
T ss_pred CCCeEEeHhhcc-C-CcHHHHHH
Confidence 566789999998 3 35655553
No 334
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=93.06 E-value=0.44 Score=43.75 Aligned_cols=125 Identities=16% Similarity=0.122 Sum_probs=84.3
Q ss_pred cceeEeccCCceeEEEEEEeCCC-eEEEEecCcccccc------------------CCCCC----CC--hHHHHHHHHHH
Q 045250 34 DLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCI------------------GESWP----MT--KERAYFEALAL 88 (165)
Q Consensus 34 ~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~------------------~~~~~----l~--~~R~~~E~~~L 88 (165)
..+=+||+--.+--|+|..+.+| .|+||-=.|-++.. .|++. .+ .++...|-.++
T Consensus 163 ~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~ 242 (538)
T KOG1235|consen 163 EFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFT 242 (538)
T ss_pred hcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchH
Confidence 44556777777788999999989 89999999987631 12211 11 11222222222
Q ss_pred HHh----------hccC---CCCCceEEEEcCCCceEEEecCCC-CchHHHHHHHcCCCCH-HHHHHHHHHHHHHHhccc
Q 045250 89 KEH----------GKLC---PDHVPEVYHFDRTMSLIGMRYLEP-PHIILRKGLIAGIKYP-LLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 89 ~~~----------~~~~---p~~vP~v~~~D~e~~~~vMEdl~~-~~~~lr~~l~~g~~~~-~~a~~iG~~La~~h~~ts 153 (165)
+.+ .... +.+||+||-.--...+++|||+.+ .-.++ +.|.+..+.+ +++..++++.+..-|.+.
T Consensus 243 ~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl-~~i~~~gi~~~~i~~~l~~~~~~qIf~~G 321 (538)
T KOG1235|consen 243 KEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDL-DAIDKRGISPHDILNKLVEAYLEQIFKTG 321 (538)
T ss_pred HHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCH-HHHHHcCCCHHHHHHHHHHHHHHHHHhcC
Confidence 222 2222 456999998888889999999985 11223 5555555554 899999999999999998
Q ss_pred ccccCc
Q 045250 154 LLYRTT 159 (165)
Q Consensus 154 d~~l~~ 159 (165)
-|+-|+
T Consensus 322 ffHaDP 327 (538)
T KOG1235|consen 322 FFHADP 327 (538)
T ss_pred CccCCC
Confidence 887765
No 335
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=93.00 E-value=0.5 Score=45.18 Aligned_cols=99 Identities=12% Similarity=0.044 Sum_probs=64.6
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~ 112 (165)
...+|.|....||++... +| .++||.-...-. ....|.+.|+.+ --..+.+++.+ +.+...+
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~l~~l---~HpnIv~~~~~~~~~~~~~l 760 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----------IPSSEIADMGKL---QHPNIVKLIGLCRSEKGAYL 760 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----------ccHHHHHHHhhC---CCCCcceEEEEEEcCCCCEE
Confidence 346899999999999874 55 899996432111 112345555544 23345556654 5667789
Q ss_pred EEecCCCCchHHHHHHHcCC--CCHHHHHHHHHHHHHHHhc
Q 045250 113 GMRYLEPPHIILRKGLIAGI--KYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~--~~~~~a~~iG~~La~~h~~ 151 (165)
||||++ ...|.+.+..-. ..-.++.+|+..|+-+|..
T Consensus 761 v~Ey~~--~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~ 799 (968)
T PLN00113 761 IHEYIE--GKNLSEVLRNLSWERRRKIAIGIAKALRFLHCR 799 (968)
T ss_pred EEeCCC--CCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccC
Confidence 999998 457777664311 1236889999999999954
No 336
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=92.91 E-value=2.6 Score=34.24 Aligned_cols=101 Identities=17% Similarity=0.068 Sum_probs=61.6
Q ss_pred EeccCCceeEEEEEEeCC---C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cCCCc
Q 045250 38 KEVGDGNLNFVYIVVGTS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF---DRTMS 110 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~e~~ 110 (165)
..+|.|....||++...+ + .+++|+-.. ..+ ..+...|.++|+.+.. |..++-.-.+ +....
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~------~~~---~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 75 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEG------TGI---SMSACREIALLRELKH--PNVIALQKVFLSHSDRKV 75 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecC------CCC---cHHHHHHHHHHHhCCC--CCeeeEEEEEeccCCCeE
Confidence 468999999999998642 3 688886532 111 1356678888887653 4333322222 33456
Q ss_pred eEEEecCCCCchHHHHHHHcC----------CCC----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAG----------IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g----------~~~----~~~a~~iG~~La~~h~~t 152 (165)
.++||+++. .+.+.+... ... -.++.+|...|.-+|...
T Consensus 76 ~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ 128 (317)
T cd07867 76 WLLFDYAEH---DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW 128 (317)
T ss_pred EEEEeeeCC---cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 799999983 333333211 111 256778889999999753
No 337
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=92.87 E-value=2.5 Score=34.01 Aligned_cols=106 Identities=16% Similarity=0.093 Sum_probs=64.4
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEE--------
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHF-------- 105 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~-------- 105 (165)
...+|.|....||++... +| .++||........ .-.......|.++++.+.. |..++-. ++.
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-----~~~~~~~~~e~~~~~~l~h--~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-----EGFPITAIREIKILRQLNH--RNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred eeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-----cCchHHHHHHHHHHHhCCC--CCeeeeeheecCcchhhhc
Confidence 466888999999999986 45 7888975433211 1122345567788877742 4333211 111
Q ss_pred --cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 106 --DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 --D~e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
+.....++||+++ . .+...+.... .. -.++.+|...|+.+|...
T Consensus 85 ~~~~~~~~lv~e~~~-~--~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 136 (302)
T cd07864 85 KKDKGAFYLVFEYMD-H--DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN 136 (302)
T ss_pred cccCCcEEEEEcccC-c--cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 2236789999998 3 3444454432 11 257788889999998553
No 338
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=92.78 E-value=1.5 Score=39.03 Aligned_cols=103 Identities=17% Similarity=0.086 Sum_probs=67.2
Q ss_pred EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 045250 38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~v 113 (165)
++||.|-.-.||+..-. ++ .|.||.-.-. .. -+-.++=...|..+|+.+. -.++-+++.+ +++...+|
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~----~l-~~k~~e~L~~Ei~iLkel~---H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKK----KL-NKKLVELLLSEIKILKELK---HPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhh----cc-CHHHHHHHHHHHHHHHhcC---CcceeeEEEEEecCCeEEEE
Confidence 34999999999999876 44 7777754322 00 0112233367777888876 3344455543 56788899
Q ss_pred EecCCCCchHHHHHHHcC-CCCH----HHHHHHHHHHHHHHh
Q 045250 114 MRYLEPPHIILRKGLIAG-IKYP----LLAEHMSEFMAKTLF 150 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g-~~~~----~~a~~iG~~La~~h~ 150 (165)
||||. +.+|-+.+.+. ...+ .+..||+..|.-+|.
T Consensus 88 MEyC~--gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~ 127 (429)
T KOG0595|consen 88 MEYCN--GGDLSDYIRRRGRLPEATARHFMQQLASALQFLHE 127 (429)
T ss_pred EEeCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99998 45888888775 4444 455667777776664
No 339
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=92.76 E-value=3.5 Score=32.71 Aligned_cols=105 Identities=11% Similarity=-0.012 Sum_probs=65.7
Q ss_pred eEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC
Q 045250 37 IKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTM 109 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~ 109 (165)
.+.+|.|....||++... .+ .+.+|.-..-.. .-...+...|...|+.+. -..+++++.+ +.+.
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~------~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~ 80 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS------DKQRRGFLAEALTLGQFD---HSNIVRLEGVITRGNT 80 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC------HHHHHHHHHHHHHHhcCC---CCCcCeEEEEEecCCC
Confidence 356899999999998753 22 577777653211 011234455666665542 2345555544 5567
Q ss_pred ceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
..+||||++ ...|.+.+... ... -.++.+|...|+-+|...
T Consensus 81 ~~lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ 127 (266)
T cd05064 81 MMIVTEYMS--NGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG 127 (266)
T ss_pred cEEEEEeCC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 889999998 34777777653 222 256778888888898654
No 340
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=92.75 E-value=1.5 Score=35.09 Aligned_cols=98 Identities=15% Similarity=0.088 Sum_probs=61.5
Q ss_pred eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250 39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM 114 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM 114 (165)
.+|.|...-||.+... ++ .+++|.-.+.. + ...|....+..... | .+++++. .+.+...+||
T Consensus 23 ~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~------~------~~~e~~~~~~~~~h-~-~iv~~~~~~~~~~~~~iv~ 88 (267)
T PHA03390 23 KLIDGKFGKVSVLKHKPTQKLFVQKIIKAKN------F------NAIEPMVHQLMKDN-P-NFIKLYYSVTTLKGHVLIM 88 (267)
T ss_pred eecCCCceEEEEEEEcCCCcEEEEEEEehhh------c------chhhHHHHHHhhcC-C-CEEEEEEEEecCCeeEEEE
Confidence 3799999999999875 34 67767643221 0 01133333322221 3 3444443 3667889999
Q ss_pred ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
|+++ ..+|.+.+..+... -.++.+|...|+.+|..+
T Consensus 89 e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ 129 (267)
T PHA03390 89 DYIK--DGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHN 129 (267)
T ss_pred EcCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9998 45888877665332 247778888888888765
No 341
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=92.70 E-value=1.7 Score=35.47 Aligned_cols=105 Identities=16% Similarity=0.160 Sum_probs=66.8
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~ 111 (165)
....+|.|....||++.+. ++ .+++|.-.. +. ....++...|...|+.+.. |. +++++ +.+.+...
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~--~~-----~~~~~~~~~e~~~l~~l~h--p~-i~~~~~~~~~~~~~~ 94 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDL--RK-----QQRRELLFNEVVIMRDYQH--QN-VVEMYKSYLVGEELW 94 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEe--cc-----cchHHHHHHHHHHHHhCCC--Cc-hhhhhhheeeCCeEE
Confidence 3446899999999999875 44 799996421 11 1223455566666665532 33 33333 44667889
Q ss_pred EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
++||+++ + ..|...+..+... ..++.++...|+-+|...
T Consensus 95 iv~e~~~-~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 137 (297)
T cd06659 95 VLMEFLQ-G-GALTDIVSQTRLNEEQIATVCESVLQALCYLHSQG 137 (297)
T ss_pred EEEecCC-C-CCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998 3 4666655444332 257788888898888664
No 342
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=92.65 E-value=1.9 Score=34.72 Aligned_cols=104 Identities=19% Similarity=0.105 Sum_probs=64.7
Q ss_pred EeccCCceeEEEEEEeCC-----C--eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 045250 38 KEVGDGNLNFVYIVVGTS-----G--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRT 108 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~-----g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e 108 (165)
+.+|.|....||++.+.. + .+.+|.-...... -...+...|...|+.+.. |.. .+++. .+.+
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~E~~~l~~l~h--~~i-v~~~~~~~~~~ 76 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS------SELRDLLSEFNLLKQVNH--PHV-IKLYGACSQDG 76 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH------HHHHHHHHHHHHHhhCCC--CCE-eeEEEEEecCC
Confidence 567888888899987641 2 4666655422110 112466678777876642 433 33433 3557
Q ss_pred CceEEEecCCCCchHHHHHHHcCCC-----------------------------CHHHHHHHHHHHHHHHhcc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGIK-----------------------------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~~-----------------------------~~~~a~~iG~~La~~h~~t 152 (165)
...++|||++ +..|++.+..... .-.++.++...|.-+|...
T Consensus 77 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 147 (290)
T cd05045 77 PLLLIVEYAK--YGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK 147 (290)
T ss_pred CcEEEEEecC--CCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 7889999998 4578777654321 0256778888888888654
No 343
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=92.65 E-value=1.7 Score=35.31 Aligned_cols=106 Identities=17% Similarity=0.068 Sum_probs=66.3
Q ss_pred eEeccCCceeEEEEEEeCC-C---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCc
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~ 110 (165)
...+|.|....||++.+.+ | .+.+|.-...... ....+...|.+.++.+... |..+ +++.+ +....
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~E~~~l~~l~~h-p~iv-~~~~~~~~~~~~ 78 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASE------NDHRDFAGELEVLCKLGHH-PNII-NLLGACENRGYL 78 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCH------HHHHHHHHHHHHHHhhcCC-Cchh-heEEEEccCCcc
Confidence 4568999999999997753 2 3566654432221 1234666788888776443 4433 34333 44556
Q ss_pred eEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t 152 (165)
.++||+.+ ..+|.+.+.+.. .. -.++.+|...|+.+|...
T Consensus 79 ~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ 139 (297)
T cd05089 79 YIAIEYAP--YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ 139 (297)
T ss_pred eEEEEecC--CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 79999997 347777765432 11 246778888999999754
No 344
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=92.60 E-value=0.79 Score=40.61 Aligned_cols=104 Identities=13% Similarity=0.028 Sum_probs=64.2
Q ss_pred eeEeccCCceeEEEEEEeC-C-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCc
Q 045250 36 TIKEVGDGNLNFVYIVVGT-S-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~ 110 (165)
-.+.+|.|..-.||++... + + .+++|.....- .-...+.+.|.++|+.+.. | .+++++ +.+.+..
T Consensus 71 ~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-------~~~~~~~~~E~~~l~~l~H--p-niv~~~~~~~~~~~~ 140 (478)
T PTZ00267 71 LTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-------ERQAAYARSELHCLAACDH--F-GIVKHFDDFKSDDKL 140 (478)
T ss_pred EEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-------HHHHHHHHHHHHHHHhCCC--C-CEeEEEEEEEECCEE
Confidence 4567788888889988764 3 3 68888643111 1122355667777766542 2 344444 3466788
Q ss_pred eEEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhc
Q 045250 111 LIGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
.+||||++ ...|.+.|.+ ...+ -.++.+|...|.-+|..
T Consensus 141 ~lv~E~~~--gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~ 188 (478)
T PTZ00267 141 LLIMEYGS--GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR 188 (478)
T ss_pred EEEEECCC--CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99999997 3456554432 2122 13667888889988865
No 345
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=92.58 E-value=1.9 Score=36.18 Aligned_cols=109 Identities=22% Similarity=0.215 Sum_probs=74.6
Q ss_pred eeEeccCCceeEEEEEEeCCC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhcc-CCCCCceEEEEc---CC
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKL-CPDHVPEVYHFD---RT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~-~p~~vP~v~~~D---~e 108 (165)
-...+|.|-...||.|.+.+. .+++|--...... .+ .+...|..+|..+... -+..+|.++..- ..
T Consensus 22 i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~------~~-~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~ 94 (322)
T KOG1164|consen 22 LGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGS------KP-SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED 94 (322)
T ss_pred EeeeccccCCceEEEEEecCCCCeeEEEEEEEecccC------CC-ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc
Confidence 677899999999999998753 4666655443332 12 2778899999988862 246889998766 34
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~ 151 (165)
-+.+||+-++++...||...-.++.-. .+|-++...|-.+|..
T Consensus 95 ~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~ 141 (322)
T KOG1164|consen 95 FNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK 141 (322)
T ss_pred eeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc
Confidence 579999999976666665444233222 4666777777777754
No 346
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=92.51 E-value=1.8 Score=35.79 Aligned_cols=107 Identities=15% Similarity=-0.012 Sum_probs=67.3
Q ss_pred eEeccCCceeEEEEEEeC--------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEc
Q 045250 37 IKEVGDGNLNFVYIVVGT--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFD 106 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D 106 (165)
.+.+|.|...-||++... .+ .+.+|....... .-...+...|.++++.+... |..+.-.- +.+
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~ 89 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT------DKDLSDLVSEMEMMKMIGKH-KNIINLLGACTQ 89 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC------HHHHHHHHHHHHHHHhhcCC-CCeeeeeEEEcc
Confidence 578999999999999742 11 577776542211 11234667788888877543 43333222 234
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++ ..+|++.+.+.. .. -.++.+|...|+-+|...
T Consensus 90 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g 154 (334)
T cd05100 90 DGPLYVLVEYAS--KGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK 154 (334)
T ss_pred CCceEEEEecCC--CCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 455679999998 347888776521 11 136788999999999654
No 347
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=92.40 E-value=1.3 Score=35.78 Aligned_cols=105 Identities=16% Similarity=0.108 Sum_probs=66.2
Q ss_pred eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 045250 36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D 106 (165)
-...+|.|...-||++... ++ .+.+|.-.-.. .-...+...|.++|+.+.. |. +++++ +.+
T Consensus 9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~ 78 (288)
T cd05093 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-------DNARKDFHREAELLTNLQH--EH-IVKFYGVCVE 78 (288)
T ss_pred eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-------HHHHHHHHHHHHHHHhCCC--CC-cceEEEEEec
Confidence 3456889999999999752 22 46667543111 1123456678888877642 43 33443 346
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC--------------CC----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGI--------------KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~--------------~~----~~~a~~iG~~La~~h~~t 152 (165)
.....++||+.+ ...|.+.+.... .. -.++.+|...|+-+|...
T Consensus 79 ~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~ 140 (288)
T cd05093 79 GDPLIMVFEYMK--HGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH 140 (288)
T ss_pred CCccEEEEEcCC--CCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 678889999997 447777665321 11 246778888898888765
No 348
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=92.38 E-value=1.7 Score=36.09 Aligned_cols=106 Identities=12% Similarity=0.033 Sum_probs=65.2
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--------E
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--------F 105 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--------~ 105 (165)
.+..||.|....||++.+. ++ .++||.-..-.. -.....+...|.++|+.+.. |..+ +++. .
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~iv-~~~~~~~~~~~~~ 90 (343)
T cd07878 19 NLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-----SLIHARRTYRELRLLKHMKH--ENVI-GLLDVFTPATSIE 90 (343)
T ss_pred hheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-----hhHHHHHHHHHHHHHHhcCC--Cchh-hhhhhhccccccc
Confidence 4578999999999999875 44 788997542211 11234566678888887753 2221 1111 1
Q ss_pred cCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
......++||+++. .|.+.+..+... ..++.+|...|.-+|...
T Consensus 91 ~~~~~~~~~~~~~~---~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 138 (343)
T cd07878 91 NFNEVYLVTNLMGA---DLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAG 138 (343)
T ss_pred ccCcEEEEeecCCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22345788998873 344444334332 257788888888898654
No 349
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=92.32 E-value=2 Score=34.89 Aligned_cols=97 Identities=6% Similarity=-0.125 Sum_probs=60.9
Q ss_pred EEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEEEecCCCCchHHH
Q 045250 47 FVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE-VYHFDRTMSLIGMRYLEPPHIILR 125 (165)
Q Consensus 47 ~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~e~~~~vMEdl~~~~~~lr 125 (165)
+|++....+..++||.-..... ..-..++...|.+.|+.+.. |..++- -.+.+.+...++||+++ +..++
T Consensus 17 ~~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~Ei~~l~~l~h--~~i~~~~~~~~~~~~~~~~~e~~~--~~~l~ 87 (314)
T cd08216 17 HLAKHKPTNTLVAVKKINLDSC-----SKEDLKLLQQEIITSRQLQH--PNILPYVTSFIVDSELYVVSPLMA--YGSCE 87 (314)
T ss_pred EEEEecCCCCEEEEEEEecccc-----chhHHHHHHHHHHHHHhcCC--cchhhhhheeecCCeEEEEEeccC--CCCHH
Confidence 4444444323888888643211 12345788889999988753 443332 14556778899999998 45677
Q ss_pred HHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 045250 126 KGLIAG--I-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 126 ~~l~~g--~-~~----~~~a~~iG~~La~~h~~t 152 (165)
+.+.+. . .. ..++.+|...|+-+|...
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ 121 (314)
T cd08216 88 DLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG 121 (314)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 766542 1 11 246778888888888754
No 350
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=92.30 E-value=1.4 Score=34.56 Aligned_cols=108 Identities=16% Similarity=-0.006 Sum_probs=70.1
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v 113 (165)
...+|.|...-||++.+. ++ .+++|......-.. .-..++...|.+.|+.+.. |..++-. .+.+.+...+|
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv 78 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE----KGSVRNVLNERRILQELNH--PFLVNLWYSFQDEENMYLV 78 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc----hhHHHHHHHHHHHHHhCCC--CChHHHHHhhcCCCeEEEE
Confidence 567899999999999986 35 78888775322100 0124567778777776643 4333322 23356778899
Q ss_pred EecCCCCchHHHHHHHcC-CCCH----HHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAG-IKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g-~~~~----~~a~~iG~~La~~h~~t 152 (165)
||++. +..|+..+... ...+ .++.+|...|+-+|...
T Consensus 79 ~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (258)
T cd05578 79 VDLLL--GGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG 120 (258)
T ss_pred EeCCC--CCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 99997 45777777654 3222 46677888888888653
No 351
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=92.23 E-value=0.56 Score=36.98 Aligned_cols=109 Identities=19% Similarity=0.053 Sum_probs=62.3
Q ss_pred EeccCCceeEEEEEEeCCC--eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCC-ceEEEEcCCCceEEE
Q 045250 38 KEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHV-PEVYHFDRTMSLIGM 114 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v-P~v~~~D~e~~~~vM 114 (165)
+.+|.|....||++.+... ...+|........ ..-+-...+...|..+++.+.. |..+ +.-+..+.+...++|
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVG--ELNPNETVQANQEAQLLSKLDH--PAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEecccccc--ccCcchHHHHHHHHHHHHhCCC--CcHHHHHHHHhcCCceEEEE
Confidence 6789999999999987632 3444443322210 1011223455667777776542 3322 112345677788999
Q ss_pred ecCCCCchHHHHHHHc----CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250 115 RYLEPPHIILRKGLIA----GI-KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 115 Edl~~~~~~lr~~l~~----g~-~~----~~~a~~iG~~La~~h~~t 152 (165)
|+++. ..|...+.+ +. .. -.++.++...|..+|...
T Consensus 82 e~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (260)
T cd08222 82 EYCEG--RDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR 126 (260)
T ss_pred EeCCC--CCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 99983 355444432 22 22 245677888888888653
No 352
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=92.20 E-value=2.4 Score=33.36 Aligned_cols=105 Identities=15% Similarity=0.080 Sum_probs=63.4
Q ss_pred EeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CC--
Q 045250 38 KEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RT-- 108 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e-- 108 (165)
+.+|.|....||++.... + .++||.-..... -.-..++...|.+.|+.... | .+.+++.+. .+
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~-~iv~~~~~~~~~~~~ 76 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-----TYSEIEEFLSEAACMKDFDH--P-NVMKLIGVCFEASSL 76 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-----CHHHHHHHHHHHHHHHhCCC--C-CeeeEEeeeccCCcc
Confidence 467889999999998642 2 588886432111 01123456677777776542 3 344444332 22
Q ss_pred ----CceEEEecCCCCchHHHHHHHcC------CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 109 ----MSLIGMRYLEPPHIILRKGLIAG------IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ----~~~~vMEdl~~~~~~lr~~l~~g------~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...++|||++ +..|.+.+... ... -.++.++...|+-+|...
T Consensus 77 ~~~~~~~~v~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~ 133 (273)
T cd05035 77 QKIPKPMVILPFMK--HGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN 133 (273)
T ss_pred ccCcccEEEEeccC--CCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 2589999997 44666665331 111 236788889999999754
No 353
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=92.18 E-value=1.8 Score=35.23 Aligned_cols=108 Identities=13% Similarity=0.053 Sum_probs=65.6
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE-VYHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~e~~~~ 112 (165)
.+..+|.|..+.||++... +| .+++|.-....... .-...+...|.+.|+.+.. |..+.- -++.+.+...+
T Consensus 19 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~----~~~~~~~~~Ei~~l~~l~h--~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 19 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS----NEKWQDIIKEVRFLQQLRH--PNTIEYKGCYLREHTAWL 92 (307)
T ss_pred hheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc----HHHHHHHHHHHHHHHhCCC--CCEEEEEEEEEeCCeEEE
Confidence 5678999999999999875 34 78888653211110 0112345667777776642 332221 13457788899
Q ss_pred EEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t 152 (165)
||||+.. .+.+.+.. +... -.++.+|...|+-+|...
T Consensus 93 v~e~~~g---~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~ 135 (307)
T cd06607 93 VMEYCLG---SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE 135 (307)
T ss_pred EHHhhCC---CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999973 22233322 2222 247788899999999653
No 354
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=92.15 E-value=3.1 Score=34.20 Aligned_cols=107 Identities=13% Similarity=0.064 Sum_probs=65.1
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCC-ChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPM-TKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l-~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~ 111 (165)
.+..+|.|....||++.+. +| .+++|.-... ..+.. ...+...|.++|+.+.. |..++-. ++.+.....
T Consensus 29 ~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~-----~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~ 101 (317)
T cd06635 29 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYS-----GKQSNEKWQDIIKEVKFLQRIKH--PNSIEYKGCYLREHTAW 101 (317)
T ss_pred hhheeccCCCeEEEEEEEcCCCcEEEEEEEecC-----CCCchHHHHHHHHHHHHHHhCCC--CCEEEEEEEEeeCCeEE
Confidence 5677999999999999875 44 7888853211 01111 12356667778876642 4433332 234667788
Q ss_pred EEEecCCCCchHHHHHHHc-C-CCC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIA-G-IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~-g-~~~----~~~a~~iG~~La~~h~~t 152 (165)
+||||++ + .+-+.+.. + ... -.++.+|...|+-+|...
T Consensus 102 lv~e~~~-g--~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ 145 (317)
T cd06635 102 LVMEYCL-G--SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN 145 (317)
T ss_pred EEEeCCC-C--CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999998 3 23333322 2 222 236678888888888764
No 355
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=92.05 E-value=1 Score=35.68 Aligned_cols=106 Identities=17% Similarity=0.067 Sum_probs=70.0
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEE
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP-EVYHFDRTMSLIG 113 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~e~~~~v 113 (165)
+..+|.|...-||++...+ + .+++|.-...... .--......|.++|+.+. .|..++ .-+..+.+...+|
T Consensus 4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-----~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~~v 76 (282)
T cd07829 4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE-----EGIPSTALREISLLKELK--HPNIVKLLDVIHTERKLYLV 76 (282)
T ss_pred ehcccccCcceEEEeeecCCCcEEEEEEecccccc-----ccccHHHHHHHHHHHhcC--CCCHHHHHhhhhcCCceEEE
Confidence 3457888889999998864 5 8888876644311 111245567888888775 233222 1133466789999
Q ss_pred EecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t 152 (165)
||+.+ . .|++.+.+. ... -.++.++...|+.+|...
T Consensus 77 ~e~~~-~--~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 118 (282)
T cd07829 77 FEYCD-M--DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR 118 (282)
T ss_pred ecCcC-c--CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99998 2 688877765 222 257788888899998764
No 356
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=91.97 E-value=1.3 Score=35.67 Aligned_cols=104 Identities=18% Similarity=0.123 Sum_probs=64.2
Q ss_pred eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 045250 37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~ 107 (165)
...+|.|..+-||++... ++ .+.+|.-.... .-.......|.++|+.+.. | .+.+++ +.+.
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~ 79 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-------LAARKDFQREAELLTNLQH--E-HIVKFYGVCGDG 79 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-------HHHHHHHHHHHHHHhcCCC--C-CcceEEEEEccC
Confidence 467888989999999753 12 36666643211 1112344556667766542 3 334433 3455
Q ss_pred CCceEEEecCCCCchHHHHHHHcCC-----------------C----CHHHHHHHHHHHHHHHhcc
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIAGI-----------------K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~----~~~~a~~iG~~La~~h~~t 152 (165)
+...+|||+++ ..+|.+.+..+. . .-.++.+|...|+-+|...
T Consensus 80 ~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 143 (291)
T cd05094 80 DPLIMVFEYMK--HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH 143 (291)
T ss_pred CceEEEEecCC--CCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 66799999998 347777765421 1 1257788999999998765
No 357
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=91.96 E-value=0.8 Score=36.18 Aligned_cols=104 Identities=15% Similarity=0.010 Sum_probs=62.7
Q ss_pred eccCCceeEEEEEEeCC-------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCC
Q 045250 39 EVGDGNLNFVYIVVGTS-------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTM 109 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~-------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~ 109 (165)
.+|.|...-||++...+ + .++||.-..... .-...+...|...|+.+.. |..++-+ +..+.+.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~ 73 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT------DQEKKEFLKEAHLMSNFNH--PNIVKLLGVCLLNEP 73 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccc------hhhHHHHHHHHHHHHhcCC--CCeeeEeeeecCCCC
Confidence 47888888999988641 1 466665321110 1123455567777776632 4333322 3456777
Q ss_pred ceEEEecCCCCchHHHHHHHcCC-------CC-----HHHHHHHHHHHHHHHhcc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGI-------KY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~-------~~-----~~~a~~iG~~La~~h~~t 152 (165)
..++||+++ ...|.+.+.+.. .. -.++.+|...|+-+|...
T Consensus 74 ~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (269)
T cd05044 74 QYIIMELME--GGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH 126 (269)
T ss_pred eEEEEeccC--CCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 899999998 347777665421 11 246778888888888653
No 358
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=91.95 E-value=1.4 Score=38.74 Aligned_cols=102 Identities=18% Similarity=0.257 Sum_probs=75.2
Q ss_pred EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEE
Q 045250 38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT--MSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e--~~~~v 113 (165)
..||.|+.-.+|-.++- ++ .|-||-..-+.+. | -.+-|+++.+.+.. -.-+|.+|+|-++ .+++|
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A--P-------QLrdEYr~YKlL~g--~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA--P-------QLRDEYRTYKLLGG--TEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred cccccCcceeeecccccccCceEEEEeccccCCc--c-------hHHHHHHHHHHHcC--CCCCCceeeeccccchhhhh
Confidence 56889999999888764 45 8999987755542 2 46789999999885 3457999999997 48999
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
||-|+|...+|-+.. |..| .-+|.++-+-+-.+|...
T Consensus 103 idLLGPSLEDLFD~C--gR~FSvKTV~miA~Qmi~rie~vH~k~ 144 (449)
T KOG1165|consen 103 IDLLGPSLEDLFDLC--GRRFSVKTVAMIAKQMITRIEYVHEKD 144 (449)
T ss_pred hhhhCcCHHHHHHHh--cCcccHHhHHHHHHHHHHHHHHHHhcc
Confidence 999998666665533 4444 246777777777777653
No 359
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=91.79 E-value=1.9 Score=33.89 Aligned_cols=104 Identities=14% Similarity=0.098 Sum_probs=62.6
Q ss_pred eccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250 39 EVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL 111 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~ 111 (165)
.+|.|....||++...+ + .+++|....... .-..++...|...|+... .|..++-.-.+ +.....
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~~ 73 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD------LEEVEQFLKEGIIMKDFS--HPNVLSLLGICLPSEGSPL 73 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCC------HHHHHHHHHHHHHHccCC--CCCcceEEEEeecCCCCcE
Confidence 47888889999987532 2 588886432111 112345556766665543 24444433222 334478
Q ss_pred EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250 112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t 152 (165)
++||+.. ...|.+.+.+.. .. -.++.+|...|+-+|...
T Consensus 74 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 118 (262)
T cd05058 74 VVLPYMK--HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK 118 (262)
T ss_pred EEEecCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999997 346777765432 11 246678999999998754
No 360
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=91.75 E-value=1.7 Score=38.07 Aligned_cols=105 Identities=18% Similarity=0.181 Sum_probs=72.7
Q ss_pred EeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC--CceEEEEcCCCceEE
Q 045250 38 KEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDH--VPEVYHFDRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~--vP~v~~~D~e~~~~v 113 (165)
+++|.|..-.||++.... | .+-+|.-...... +. .+.+-...|..+|+.+... |.. .+.+ +-|+....+|
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~-~~---~~~~~v~~Ev~il~~l~~h-pniv~l~~~-~e~~~~~~lv 114 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLR-GK---EDREDVRREVAILQQLSGH-PNIVQLKDA-FEDPDSVYLV 114 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhcc-cc---ccHHHHHHHHHHHHhccCC-CCEEEEEEE-EEcCCeEEEE
Confidence 689999999999999874 5 5666655443322 22 2667888999999999863 332 2332 3345567899
Q ss_pred EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250 114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
||.+. +..|.+.+.+.. + ..++.+|...+..+|..
T Consensus 115 mEL~~--GGeLfd~i~~~~-~sE~da~~~~~~il~av~~lH~~ 154 (382)
T KOG0032|consen 115 MELCE--GGELFDRIVKKH-YSERDAAGIIRQILEAVKYLHSL 154 (382)
T ss_pred EEecC--CchHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHhC
Confidence 99998 457777777762 3 35677778888888873
No 361
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=91.72 E-value=1.3 Score=36.97 Aligned_cols=105 Identities=19% Similarity=0.151 Sum_probs=64.0
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--------E
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--------F 105 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--------~ 105 (165)
.+..+|.|....||++.+. +| .++||.-..-.. ......+...|.++|+.+.. |..+ +++. .
T Consensus 19 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~niv-~~~~~~~~~~~~~ 90 (342)
T cd07879 19 SLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-----SEIFAKRAYRELTLLKHMQH--ENVI-GLLDVFTSAVSGD 90 (342)
T ss_pred EEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-----cccchhHHHHHHHHHHhcCC--CCcc-chhheecccccCC
Confidence 5688999999999999875 45 799996532111 11223456678888877643 3222 2222 1
Q ss_pred cCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
+.....+|||+++. .++..+ ..... ..++.++...|+-+|...
T Consensus 91 ~~~~~~lv~e~~~~---~l~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ 137 (342)
T cd07879 91 EFQDFYLVMPYMQT---DLQKIM-GHPLSEDKVQYLVYQMLCGLKYIHSAG 137 (342)
T ss_pred CCceEEEEeccccc---CHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22345899999972 444433 22222 246778888999999765
No 362
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=91.71 E-value=2.7 Score=33.64 Aligned_cols=106 Identities=15% Similarity=0.152 Sum_probs=62.7
Q ss_pred eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250 37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI 112 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~ 112 (165)
...+|.|....||++.+. +| .+.+|+-..... .-...+...|...|...... | .+++++ .+++....+
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~e~~~l~~~~~~-~-~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD------EKEQKRLLMDLDVVMRSSDC-P-YIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccC------hHHHHHHHHHHHHHHHhcCC-C-CEeeeeeEEecCCcEEE
Confidence 456889999999999876 34 788897442111 12233455566666655432 3 344444 456778889
Q ss_pred EEecCCCCchHHHHHHH---cCCCC----HHHHHHHHHHHHHHHh
Q 045250 113 GMRYLEPPHIILRKGLI---AGIKY----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~---~g~~~----~~~a~~iG~~La~~h~ 150 (165)
+||+++.....+...+. .+... ..++.++...|+-+|.
T Consensus 81 ~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 125 (288)
T cd06616 81 CMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE 125 (288)
T ss_pred EEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 99998743334433322 12222 2466677777777764
No 363
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=91.66 E-value=2 Score=34.53 Aligned_cols=107 Identities=15% Similarity=-0.021 Sum_probs=67.2
Q ss_pred eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250 36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D 106 (165)
..+.+|.|....||++... .+ .+++|........ -...+...|.++|+.+.+. |.. -+++. .+
T Consensus 16 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~------~~~~~~~~E~~~l~~l~~h-~~i-~~~~~~~~~ 87 (293)
T cd05053 16 LGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE------KDLSDLVSEMEMMKMIGKH-KNI-INLLGVCTQ 87 (293)
T ss_pred EeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCH------HHHHHHHHHHHHHHhhcCC-CCe-eeEEEEEcC
Confidence 4577898988999998753 12 5788866532210 1124566788888776443 332 23333 34
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t 152 (165)
.....++|||++ + .+|.+.+.... .. -.++.+|...|+-+|...
T Consensus 88 ~~~~~li~e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ 152 (293)
T cd05053 88 EGPLYVVVEYAA-H-GNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK 152 (293)
T ss_pred CCCeEEEEEeCC-C-CcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 456789999998 3 37777765321 11 247888999999999653
No 364
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=91.41 E-value=0.45 Score=37.35 Aligned_cols=63 Identities=17% Similarity=0.112 Sum_probs=44.0
Q ss_pred HHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250 82 YFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS 153 (165)
Q Consensus 82 ~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts 153 (165)
..|.++++.+++ -+..|++|+++++. .|.||+. +..+...-+ ..|.+...|+..|+++|...-
T Consensus 21 ~~E~~~~~~l~~--~g~~p~~~~~~~~g--~v~e~i~--g~~l~~~~~---~~~~~~~~iA~~l~~lH~~~~ 83 (211)
T PF01633_consen 21 ENENEALKLLSE--AGLGPKIIYFFENG--RVEEFIE--GRTLSPEDF---RNPEILKRIAKLLAKLHSIPI 83 (211)
T ss_dssp HHHHHHHHHHHH--TTSSS-EEEEETTE--EEEE--S--SEE--CGGG---GSHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHH--cCCCCeEEEEcCCC--cEEEEec--ccccChhhc---cChHHHHHHHHHHHHHhhccc
Confidence 568889988887 57899999998665 5779996 556543211 246789999999999998665
No 365
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=91.27 E-value=2.2 Score=39.56 Aligned_cols=104 Identities=18% Similarity=0.114 Sum_probs=78.9
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC---CCceEE--EEcCC
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPD---HVPEVY--HFDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~---~vP~v~--~~D~e 108 (165)
.++.||-|..--|.|+.+. ++ -|.||-=....+- .....+|..+|..+.+.-|+ ++-+.| ++...
T Consensus 190 V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f--------~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 190 VLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF--------LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEecccccceeEEEEecCCCcEEEEEeeccChHH--------HHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 3677888888888888876 35 6888876655443 26889999999999987665 444444 45568
Q ss_pred CceEEEecCCCCchHHHHHHHcCCC-------CHHHHHHHHHHHHHHHh
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGIK-------YPLLAEHMSEFMAKTLF 150 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~~-------~~~~a~~iG~~La~~h~ 150 (165)
...+|.|-|+ .+|++.|...+- ...++.+|.+.|..+|.
T Consensus 262 HlciVfELL~---~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~ 307 (586)
T KOG0667|consen 262 HLCIVFELLS---TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHE 307 (586)
T ss_pred ceeeeehhhh---hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8899999997 699998877652 23689999999999984
No 366
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=91.19 E-value=2.2 Score=35.88 Aligned_cols=63 Identities=19% Similarity=0.129 Sum_probs=35.9
Q ss_pred HHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCC---chHHHHHHHcCCCCHHHHHHHHHHHHHHH
Q 045250 84 EALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP---HIILRKGLIAGIKYPLLAEHMSEFMAKTL 149 (165)
Q Consensus 84 E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~---~~~lr~~l~~g~~~~~~a~~iG~~La~~h 149 (165)
|..-|+++.+ +...||+.| .-.++++|||++|++ ...|++.=........+-+.+-+.+.++.
T Consensus 118 Ef~NL~R~~e-AGVrvP~Pi--~~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~ 183 (268)
T COG1718 118 EFRNLKRAYE-AGVRVPEPI--AFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLY 183 (268)
T ss_pred HHHHHHHHHH-cCCCCCCce--eecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHH
Confidence 3344555555 367899999 568999999999963 33455422221111233444445554443
No 367
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=91.04 E-value=3.9 Score=33.39 Aligned_cols=108 Identities=13% Similarity=0.060 Sum_probs=64.4
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~ 112 (165)
.+..+|.|....||++.+.. + .+++|+....... . .-...+...|.+.|+.+.. |..++-. ++.+.....+
T Consensus 19 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~--~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~l 92 (308)
T cd06634 19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--S--NEKWQDIIKEVRFLQKLRH--PNTIQYRGCYLREHTAWL 92 (308)
T ss_pred HHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc--C--hHHHHHHHHHHHHHHhCCC--CCcccEEEEEEcCCeeEE
Confidence 45678888888999999763 4 6888866432111 0 0112345567778877642 4433322 3457778889
Q ss_pred EEecCCCCchHHHHHHH-cCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLI-AGIK-Y----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~-~g~~-~----~~~a~~iG~~La~~h~~t 152 (165)
|||++. + .+.+.+. .+.. . -.++.++...|.-+|...
T Consensus 93 v~e~~~-~--~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~ 135 (308)
T cd06634 93 VMEYCL-G--SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 135 (308)
T ss_pred EEEccC-C--CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999997 3 2334332 2322 2 134566777777888643
No 368
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=90.96 E-value=1.7 Score=35.85 Aligned_cols=104 Identities=13% Similarity=-0.021 Sum_probs=61.2
Q ss_pred eccCC--ceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceE
Q 045250 39 EVGDG--NLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSLI 112 (165)
Q Consensus 39 ~l~~G--n~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~~ 112 (165)
++|.| +...||++.+. .| .+.||.-..-... . -..++...|...++.+.. |. +.++ ++.+.+...+
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~--~---~~~~~~~~e~~~~~~l~h--~n-iv~~~~~~~~~~~~~~ 76 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT--E---EHLKALQNEVVLSHFFRH--PN-IMTSWTVFTTGSWLWV 76 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC--H---HHHHHHHHHHHHHHhCCC--CC-cceEeeeEecCCceEE
Confidence 46666 55569999875 45 7888875422110 0 112445556666654432 33 3333 3346677889
Q ss_pred EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t 152 (165)
+||++. +..+.+.+.+.. .. -.++.+|...|+-+|...
T Consensus 77 v~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ 121 (328)
T cd08226 77 ISPFMA--YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG 121 (328)
T ss_pred EEeccc--CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 345555554421 11 147788899999888643
No 369
>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac
Probab=90.82 E-value=1.8 Score=35.82 Aligned_cols=30 Identities=20% Similarity=0.295 Sum_probs=25.3
Q ss_pred ceeEeccCCceeEEEEEEeCCCeEEEEecC
Q 045250 35 LTIKEVGDGNLNFVYIVVGTSGSFVIKQAL 64 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~ 64 (165)
+++...|||++-.++-|...+|.+|||-+.
T Consensus 2 ie~i~~s~s~~~~~~F~~s~~~a~ViK~s~ 31 (238)
T cd05124 2 IKAIDLSDSGVFGALFVESESGAIVVKSSP 31 (238)
T ss_pred ceEEEecCCceEEEEEEcCCCcEEEEEcCc
Confidence 567889999998888888777899999874
No 370
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=90.71 E-value=3 Score=32.66 Aligned_cols=93 Identities=14% Similarity=0.079 Sum_probs=54.1
Q ss_pred CceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEEecCC
Q 045250 43 GNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIGMRYLE 118 (165)
Q Consensus 43 Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~vMEdl~ 118 (165)
|...-||+|.+. +| .+++|+-..... . ..|...+. ....|. +++++ +.+.+...++||+++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-------~-----~~~~~~~~--~~~~~~-i~~~~~~~~~~~~~~lv~e~~~ 68 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-------Y-----SRERLTII--PHCVPN-MVCLHKYIVSEDSVFLVLQHAE 68 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-------h-----hhHHHHHH--hcCCCc-eeehhhheecCCeEEEEEecCC
Confidence 666678999886 44 899997643211 1 11222211 111222 23333 346678889999998
Q ss_pred CCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 119 PPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 119 ~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
...|.+.+.+.... -.++.++...|..+|...
T Consensus 69 --~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ 105 (237)
T cd05576 69 --GGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREG 105 (237)
T ss_pred --CCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 34666666554322 246677788888888654
No 371
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=90.67 E-value=2 Score=35.84 Aligned_cols=107 Identities=14% Similarity=0.074 Sum_probs=67.0
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC----
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRT---- 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e---- 108 (165)
.+..+|.|....||++.+.. + .++||.-..-.. -.-...+...|..+|+.+.. |..++-. ++.+.+
T Consensus 19 ~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 19 NLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-----SAIHAKRTYRELRLLKHMDH--ENVIGLLDVFTPASSLED 91 (343)
T ss_pred EEEEeccCCceEEEEEEECCCCcEEEEEecccccc-----hhhHHHHHHHHHHHHHhccC--CCHHHHHHHhhccccccc
Confidence 57889999999999998863 4 788886432111 01223456678888877632 3333221 112222
Q ss_pred --CceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250 109 --MSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 --~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t 152 (165)
...+|||+++. .|.+.+..+.... .++.+|...|+-+|...
T Consensus 92 ~~~~~lv~e~~~~---~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g 138 (343)
T cd07851 92 FQDVYLVTHLMGA---DLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAG 138 (343)
T ss_pred cccEEEEEecCCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 26899999972 5666665554332 46778888888888754
No 372
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=90.63 E-value=5.7 Score=33.18 Aligned_cols=107 Identities=14% Similarity=0.068 Sum_probs=64.0
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------- 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------- 106 (165)
.++.+|.|....||++.+. +| .+++|.-..-. .-....++...|.+.|+.+.. |..++-.-.+.
T Consensus 21 ~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~Ei~~l~~l~h--~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 21 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-----QSIIHAKRTYRELRLLKHMKH--ENVIGLLDVFTPARSLEE 93 (345)
T ss_pred EEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-----hhhHHHHHHHHHHHHHHHcCC--Ccccceeeeeeecccccc
Confidence 5678999999999999875 45 78888554211 111234567778888887653 33333221121
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t 152 (165)
.....++||+++ ..+.+.+..+... -.++.+|...|+-+|...
T Consensus 94 ~~~~~lv~~~~~---~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 140 (345)
T cd07877 94 FNDVYLVTHLMG---ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 140 (345)
T ss_pred cccEEEEehhcc---cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 122456777665 2454444433322 246778888888899765
No 373
>PHA03207 serine/threonine kinase US3; Provisional
Probab=90.63 E-value=4.4 Score=34.67 Aligned_cols=100 Identities=10% Similarity=-0.057 Sum_probs=64.3
Q ss_pred eeEeccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCc
Q 045250 36 TIKEVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~ 110 (165)
-+..||.|....||++... .+ .++||.... . .....|.++|+.+.. |..++-+ .+.+....
T Consensus 96 i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~------~------~~~~~E~~il~~l~h--~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 96 ILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG------G------KTPGREIDILKTISH--RAIINLIHAYRWKSTV 161 (392)
T ss_pred EEEeecCCCCeEEEEEEEcCCccceeEEEEeccc------c------ccHHHHHHHHHhcCC--CCccceeeeEeeCCEE
Confidence 4577899999999998753 23 688886431 1 123468888887753 4433332 23345667
Q ss_pred eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.++||+++. .+.+.+...... -.++.+|...|+-+|...
T Consensus 162 ~lv~e~~~~---~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~g 205 (392)
T PHA03207 162 CMVMPKYKC---DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRG 205 (392)
T ss_pred EEEehhcCC---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 899999872 455555433222 257788888899999764
No 374
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=90.58 E-value=3.7 Score=35.75 Aligned_cols=84 Identities=15% Similarity=0.049 Sum_probs=53.7
Q ss_pred eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250 37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~ 107 (165)
.+.||.|-...||++... .+ .+.||.-..-.. .-...+...|.++|+.+..+ | ++++++.+ +.
T Consensus 42 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~~E~~~l~~l~~H-~-niv~~~~~~~~~ 113 (401)
T cd05107 42 GRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR------SSEKQALMSELKIMSHLGPH-L-NIVNLLGACTKG 113 (401)
T ss_pred hhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC------hhHHHHHHHHHHHHHhcCCC-C-CeEEEEEEEccC
Confidence 468999999999999853 22 588887642211 11234677788888877543 4 34444433 33
Q ss_pred CCceEEEecCCCCchHHHHHHHc
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIA 130 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~ 130 (165)
....+||||++ ..+|.+.+..
T Consensus 114 ~~~~iv~E~~~--~g~L~~~l~~ 134 (401)
T cd05107 114 GPIYIITEYCR--YGDLVDYLHR 134 (401)
T ss_pred CCcEEEEeccC--CCcHHHHHHh
Confidence 45679999998 3477776644
No 375
>PTZ00036 glycogen synthase kinase; Provisional
Probab=90.53 E-value=4.6 Score=35.43 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=60.0
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEc------
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFD------ 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D------ 106 (165)
-.+.||.|....||++... .+ .+.||.-... . .....|..+|+.+.. |..++-. ++++
T Consensus 70 ~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-----~------~~~~~Ei~il~~l~h--~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 70 LGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-----P------QYKNRELLIMKNLNH--INIIFLKDYYYTECFKKN 136 (440)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-----c------chHHHHHHHHHhcCC--CCCcceeeeEeecccccC
Confidence 4677899999999999875 44 7889864311 1 123358888887743 3333321 1111
Q ss_pred CCC--ceEEEecCCCCch-HHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250 107 RTM--SLIGMRYLEPPHI-ILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ~e~--~~~vMEdl~~~~~-~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t 152 (165)
... ..+||||++.+.. .++.....+... -.++.+|...|+-+|...
T Consensus 137 ~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~ 190 (440)
T PTZ00036 137 EKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF 190 (440)
T ss_pred CCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 111 2379999983211 122222233322 235678888999999754
No 376
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=90.01 E-value=4.6 Score=31.85 Aligned_cols=105 Identities=15% Similarity=0.069 Sum_probs=64.7
Q ss_pred EeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC----C
Q 045250 38 KEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR----T 108 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~----e 108 (165)
+.+|.|....||++... .+ .++||+-....... ...++...|...|+.+.. | .+.+++.+-. .
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~~~~ 76 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS-----SDIEEFLREAACMKEFDH--P-NVIKLIGVSLRSRAK 76 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCCh-----HHHHHHHHHHHHHhcCCC--C-CcceEEEEEccCCCC
Confidence 45788888999999753 34 79999876544321 224566778888776642 4 4455554321 1
Q ss_pred C----ceEEEecCCCCchHHHHHHHc----CCC-------CHHHHHHHHHHHHHHHhcc
Q 045250 109 M----SLIGMRYLEPPHIILRKGLIA----GIK-------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~----~~~vMEdl~~~~~~lr~~l~~----g~~-------~~~~a~~iG~~La~~h~~t 152 (165)
. ..+++||.. ..+|...+.. ++. .-.++.+|...|+-+|...
T Consensus 77 ~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 133 (273)
T cd05074 77 GRLPIPMVILPFMK--HGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN 133 (273)
T ss_pred CcccceEEEEecCC--CCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 257888887 2356555432 111 1357788888899888765
No 377
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=89.98 E-value=2.3 Score=33.94 Aligned_cols=105 Identities=14% Similarity=0.045 Sum_probs=63.7
Q ss_pred eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 045250 37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~ 107 (165)
++++|.|....||++... ++ .++||....... .--.++...|...++.+. .|. +.+++. .+.
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~~~~l~--h~~-iv~~~~~~~~~ 80 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE------GPLREEFKHEAMMRSRLQ--HPN-IVCLLGVVTKE 80 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC------HHHHHHHHHHHHHHhcCC--CCC-cCeEEEEEcCC
Confidence 456788888899999753 12 688887652211 111244555666665543 243 333433 345
Q ss_pred CCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t 152 (165)
+...++||+.+ ...+.+.+.... .. -.++.++...|.-+|...
T Consensus 81 ~~~~~~~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g 144 (283)
T cd05091 81 QPLSMIFSYCS--HSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH 144 (283)
T ss_pred CceEEEEEcCC--CCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 66778999987 457777764211 11 146778899999998654
No 378
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=89.85 E-value=6 Score=34.38 Aligned_cols=109 Identities=18% Similarity=0.117 Sum_probs=71.4
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCC-CChHHHHHHHHHHHHhhccCCC--CCceEEEEcCCCc
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWP-MTKERAYFEALALKEHGKLCPD--HVPEVYHFDRTMS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~-l~~~R~~~E~~~L~~~~~~~p~--~vP~v~~~D~e~~ 110 (165)
-...+|.|+..-|+..... +| .+.+| -..+-.+ ..+. .-..+...|..+|+.+..+ |. ..-+++ ..+...
T Consensus 21 ~~~~lG~GsfgkV~~a~~~~t~~~vAiK-ii~~~~~--~~~~~~~~~~i~rEi~~~~~~~~H-pnI~~l~ev~-~t~~~~ 95 (370)
T KOG0583|consen 21 LGRTLGSGSFGKVKLAKHRLTGEKVAIK-IIDRKKV--SSKSQKLDELIKREISILRRLRSH-PNIIRLLEVF-ATPTKI 95 (370)
T ss_pred eeeeecCCCCeeEEEeeeccCCCeEEEE-Eechhcc--cccccccchhhHHHHHHHHHhccC-CCEeEEEEEE-ecCCeE
Confidence 5678999999999999765 45 78888 3333222 2232 3445666788888888855 32 123333 344558
Q ss_pred eEEEecCCCCchHHHHHHHc-CCCCH----HHHHHHHHHHHHHHhc
Q 045250 111 LIGMRYLEPPHIILRKGLIA-GIKYP----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~-g~~~~----~~a~~iG~~La~~h~~ 151 (165)
.+||||+. + ..|-+.+.+ |..-+ .+-.||-..++-.|..
T Consensus 96 ~ivmEy~~-g-GdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~ 139 (370)
T KOG0583|consen 96 YIVMEYCS-G-GDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR 139 (370)
T ss_pred EEEEEecC-C-ccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC
Confidence 89999999 4 466666666 55444 3557778888888877
No 379
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=89.61 E-value=1.6 Score=35.83 Aligned_cols=104 Identities=19% Similarity=0.155 Sum_probs=64.6
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHH-------HHHHHHHhhcc------CC---CCC
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYF-------EALALKEHGKL------CP---DHV 99 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~-------E~~~L~~~~~~------~p---~~v 99 (165)
.++.+.+..-|+|.+|..+.+.+|+|.-++..+.. +|... -.+.+.....+ .+ -.+
T Consensus 35 ~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~--------er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 35 IIKVFKNTKRNYVALIEIDGKKYILKEPREENRRP--------ERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred EEEeecCCCccEEEEEEECCcEEEEeccchhhhhH--------HHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 55788899999999999988899999999877542 22222 11112211111 11 123
Q ss_pred ceEEEEc-CCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 100 PEVYHFD-RTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 100 P~v~~~D-~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
.+--.+. ...++++|||+. +..+-+.. .+.+.+++.|...+-++|...
T Consensus 107 ~ekk~~~~~~~~~ll~EYIe--G~~l~d~~---~i~e~~~~ki~~~ikqlH~~G 155 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIE--GVELNDIE---DIDEDLAEKIVEAIKQLHKHG 155 (229)
T ss_pred eeeeeccceeEEEEEEEEec--Ceecccch---hcCHHHHHHHHHHHHHHHHcC
Confidence 3333332 355678999998 44443321 134567888889999999764
No 380
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=89.24 E-value=3.6 Score=34.47 Aligned_cols=83 Identities=16% Similarity=0.034 Sum_probs=48.5
Q ss_pred eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 045250 37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDR 107 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~ 107 (165)
.+.||.|....||++... ++ .+++|+-..-.. . -...+...|...++.+... |. +.+++. +++
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~---~---~~~~~~~~E~~~~~~l~~h-~n-iv~~~~~~~~~ 83 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT---A---SEYKALMTELKILIHIGHH-LN-VVNLLGACTKP 83 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCC---H---HHHHHHHHHHHHHHhhccC-cc-hhheeeeEecC
Confidence 467899999999998632 22 688886542111 0 1123455677777766432 33 333332 233
Q ss_pred C-CceEEEecCCCCchHHHHHHH
Q 045250 108 T-MSLIGMRYLEPPHIILRKGLI 129 (165)
Q Consensus 108 e-~~~~vMEdl~~~~~~lr~~l~ 129 (165)
+ ...++|||++ +.+|.+.+.
T Consensus 84 ~~~~~~v~ey~~--~~~L~~~i~ 104 (337)
T cd05054 84 GGPLMVIVEYCK--FGNLSNYLR 104 (337)
T ss_pred CCCEEEEEecCC--CCCHHHHHH
Confidence 3 4567899998 346666554
No 381
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=88.69 E-value=2.8 Score=37.52 Aligned_cols=108 Identities=18% Similarity=0.079 Sum_probs=61.4
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc---eEEEEcC---
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP---EVYHFDR--- 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP---~v~~~D~--- 107 (165)
-.+.||.|....||++... +| .+.||.-...-. -.-...|...|..+|....- |..+. .....|+
T Consensus 36 i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-----~~~~~~~~~~Ei~~l~~~~h--~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 36 ISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-----SEADKNRAQAEVCCLLNCDF--FSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred EEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-----CHHHHHHHHHHHHHHhcCCC--CcEEEeecceecccccCc
Confidence 4568999999999999865 45 799996432110 01122345556556654321 11111 0111111
Q ss_pred C---CceEEEecCCCCchHHHHHHHcC----CCCH-----HHHHHHHHHHHHHHhcc
Q 045250 108 T---MSLIGMRYLEPPHIILRKGLIAG----IKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 e---~~~~vMEdl~~~~~~lr~~l~~g----~~~~-----~~a~~iG~~La~~h~~t 152 (165)
+ ...+||||++ ...|++.+.+. ..++ .++.++...|.-+|...
T Consensus 109 ~~~~~i~lV~Ey~~--~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~ 163 (496)
T PTZ00283 109 ENVLMIALVLDYAN--AGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH 163 (496)
T ss_pred ccceEEEEEEeCCC--CCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 1358999998 34777766542 2222 36778888999998643
No 382
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=88.55 E-value=4.6 Score=30.50 Aligned_cols=94 Identities=19% Similarity=0.086 Sum_probs=61.4
Q ss_pred EEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEEecCCCCch
Q 045250 47 FVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIGMRYLEPPHI 122 (165)
Q Consensus 47 ~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~vMEdl~~~~~ 122 (165)
-||++.... | .+++|........ .+ .++...|.+.++.+.. |. ++.++ ..+.....++||+.+ ..
T Consensus 4 ~v~~~~~~~~~~~~~~k~~~~~~~~---~~---~~~~~~e~~~~~~l~~--~~-i~~~~~~~~~~~~~~l~~e~~~--~~ 72 (244)
T smart00220 4 KVYLARDKKTGKLVAIKVIKKEKIK---KK---RERILREISILKKLKH--PN-IVRLYDVFEDEDKLYLVMEYCD--GG 72 (244)
T ss_pred EEEEEEECCCCcEEEEEEecccccc---cH---HHHHHHHHHHHHhCCC--Cc-HHHHHhheeeCCEEEEEEeCCC--CC
Confidence 578888764 5 8999986644321 11 5788888888877722 32 33333 234478899999998 34
Q ss_pred HHHHHHHcCC-CC----HHHHHHHHHHHHHHHhc
Q 045250 123 ILRKGLIAGI-KY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 123 ~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~ 151 (165)
.|.+.+.... .. -.++.++...|+.+|..
T Consensus 73 ~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 106 (244)
T smart00220 73 DLFDLLKKRGRLSEDEARFYARQILSALEYLHSN 106 (244)
T ss_pred CHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 7777665543 11 25777788888888875
No 383
>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]
Probab=87.54 E-value=2.1 Score=37.53 Aligned_cols=110 Identities=14% Similarity=0.184 Sum_probs=77.0
Q ss_pred CCCcceeEeccCCceeEEEEEEeCCC-eEEEEecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 045250 31 KFDDLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT 108 (165)
Q Consensus 31 ~~~~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e 108 (165)
..+..+++.++||..|.+|.++.+.. ..|=++-.+++ |+-|+.-. ..-...|..++..++.. ..=|++|.+-++
T Consensus 39 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~--~~~~~~Esv~fa~lSer--~lGPkL~G~F~~ 114 (366)
T KOG2686|consen 39 INEEQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVD--FSQRETESVMFAILSER--GLGPKLYGFFSG 114 (366)
T ss_pred hhhhheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCcc--HHHhhhHHHHHHHHhhc--CCCcceeeecCC
Confidence 34567999999999999999998876 45545555554 77655332 45556677778777774 456999998877
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ 151 (165)
.. ||..=+ .+.|.. +--..|++...||.-|+..|..
T Consensus 115 GR---~Eefip-SRtL~~---~~i~~p~~S~~Ia~~~~~~H~~ 150 (366)
T KOG2686|consen 115 GR---FEEFIP-SRTLTL---ADIRDPEISKRIAAKLAEYHGI 150 (366)
T ss_pred cc---Hhhhcc-ccccch---HhhcchhHHHHHHHHHHHhcCC
Confidence 65 443332 555544 3335688999999999999953
No 384
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=87.18 E-value=15 Score=29.89 Aligned_cols=101 Identities=17% Similarity=0.105 Sum_probs=60.9
Q ss_pred EeccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-c--CCCc
Q 045250 38 KEVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-D--RTMS 110 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D--~e~~ 110 (165)
..+|.|....||++... ++ .+.+|+-... .. ......|.++|+.+.. |..+.-.-.| + ....
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~------~~---~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 75 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT------GI---SMSACREIALLRELKH--PNVISLQKVFLSHADRKV 75 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCC------CC---cHHHHHHHHHHHhcCC--CCCcceeeeEecCCCcEE
Confidence 46899999999999854 23 6888875421 11 1345678888887753 4333322222 1 2335
Q ss_pred eEEEecCCCCchHHHHHHHcC---------CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAG---------IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g---------~~~-----~~~a~~iG~~La~~h~~t 152 (165)
.++||+++. .+.+.+... ... -.++.+|...|.-+|...
T Consensus 76 ~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ 128 (317)
T cd07868 76 WLLFDYAEH---DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 128 (317)
T ss_pred EEEEeccCC---CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 688999873 343433221 111 246788888999888653
No 385
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=86.83 E-value=7 Score=35.80 Aligned_cols=114 Identities=21% Similarity=0.198 Sum_probs=71.5
Q ss_pred CcceeEeccCCceeEEEEEEeCCC-eEEEEecCccccc-------------------cCCCCCCChHHH-----------
Q 045250 33 DDLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRC-------------------IGESWPMTKERA----------- 81 (165)
Q Consensus 33 ~~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~-------------------~~~~~~l~~~R~----------- 81 (165)
+..+-+|++.+.+--|++....+| .|+||-=+|=++. ....|.+++.-.
T Consensus 126 ~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E 205 (517)
T COG0661 126 SEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE 205 (517)
T ss_pred HHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence 355678999999999999999988 9999999987642 111133443322
Q ss_pred ---HHHHHHHHHhhccC---C-CCCceEEEEcCCCceEEEecCCCCchHHHHH-HH-cCCCCHHHHHHHHHHHHH
Q 045250 82 ---YFEALALKEHGKLC---P-DHVPEVYHFDRTMSLIGMRYLEPPHIILRKG-LI-AGIKYPLLAEHMSEFMAK 147 (165)
Q Consensus 82 ---~~E~~~L~~~~~~~---p-~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~-l~-~g~~~~~~a~~iG~~La~ 147 (165)
+.|+..+..+++.. | -.||+||--=-...+++||++.+ .+.-... +. +|.....+|+.+.+..-+
T Consensus 206 lDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~G-i~i~d~~~l~~~g~d~k~ia~~~~~~f~~ 279 (517)
T COG0661 206 LDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDG-IKISDIAALKSAGIDRKELAELLVRAFLR 279 (517)
T ss_pred hCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCC-EecccHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 34555666666543 2 26999995445789999999983 3332222 22 233323555555444333
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=86.35 E-value=4.3 Score=37.20 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=57.9
Q ss_pred eeEeccCCceeEEEEEEeC-C----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC---------Cc
Q 045250 36 TIKEVGDGNLNFVYIVVGT-S----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDH---------VP 100 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~---------vP 100 (165)
-...||.|..--||++.+. + + .++||+...+.. .|......+...++.. .+
T Consensus 136 l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--------------~e~~~~e~l~~~~~~~~~~~~~~~~~~ 201 (566)
T PLN03225 136 LGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--------------VEIWMNERVRRACPNSCADFVYGFLEP 201 (566)
T ss_pred EeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--------------hHHHHHHHHHhhchhhHHHHHHhhhcc
Confidence 4577999999999999875 3 5 899998654321 1111111111111111 11
Q ss_pred eEEEEcCCCceEEEecCCCCchHHHHHHHcCCC-------------------------CHHHHHHHHHHHHHHHhc
Q 045250 101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIK-------------------------YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 101 ~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~-------------------------~~~~a~~iG~~La~~h~~ 151 (165)
.. .-+.....+||||.+ ...|.+.+..+.. ...++.+|...|.-+|..
T Consensus 202 ~~-~~~~~~~~LV~ey~~--~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~ 274 (566)
T PLN03225 202 VS-SKKEDEYWLVWRYEG--ESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST 274 (566)
T ss_pred cc-cccCCceEEEEEecC--CCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC
Confidence 11 235567889999998 3466665544321 014677788888888865
No 387
>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]
Probab=85.79 E-value=3 Score=36.23 Aligned_cols=105 Identities=15% Similarity=0.199 Sum_probs=66.9
Q ss_pred CCCcceeEeccCCceeEEEEEEeCCC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC
Q 045250 31 KFDDLTIKEVGDGNLNFVYIVVGTSG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR 107 (165)
Q Consensus 31 ~~~~~~v~~l~~Gn~N~v~rV~~~~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~ 107 (165)
+..+++.+..+||-.|-++-+..... +|+|.- |.- ..+--++.++-.+-...| ++ -+.+|++| -.
T Consensus 80 ~~~~v~~~~fs~gitNkL~~~~vg~~~e~~v~vrv---yg~--~te~vIdre~Ev~afk~L---~a--~G~ap~Ly--~t 147 (391)
T KOG4720|consen 80 KPPEVTFKRFSDGITNKLFSCYVGENMEDHVLVRV---YGH--NTELVIDRENEVIAFKLL---AA--YGFAPKLY--GT 147 (391)
T ss_pred CccceeeeeeccchhHHHHHhhcccccceeEEEEe---ccC--CCceeeccHHHHHHHHHH---HH--cCcChhhh--he
Confidence 45678888999999998876654432 444322 211 123345555544433334 33 35678888 44
Q ss_pred CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 108 TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 108 e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
=++-+|.||+. ++.|-- +....|.+...|++-||++|.--
T Consensus 148 F~NGLvyefi~--g~tL~p---~~mr~pki~~lIAr~mak~H~~~ 187 (391)
T KOG4720|consen 148 FNNGLVYEFIQ--GKTLEP---EHMREPKIFRLIARRMAKIHSIV 187 (391)
T ss_pred ecCceEEeeec--CcccCh---hhccChHHHHHHHHHHHHhheec
Confidence 57889999998 445533 23346889999999999999753
No 388
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=85.65 E-value=11 Score=31.94 Aligned_cols=105 Identities=16% Similarity=0.247 Sum_probs=73.1
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCce
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RTMSL 111 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e~~~ 111 (165)
-++.||.|..--+|....- +| .|-||-....++. | -..+|+.+.+.++.- .-.|.+++|- .+-++
T Consensus 19 lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--p-------qL~yEskvY~iL~~g--~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 19 LVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--P-------QLLYESKVYRILQGG--VGIPHIRHYGTEKDYNV 87 (341)
T ss_pred EEEeecCCchhheeeeeeccCCceEEEEeecccCCC--c-------chhHHHHHHHHhccC--CCCchhhhhccccccce
Confidence 6889999999999988664 56 8999999888875 3 346788888777652 2357787776 56789
Q ss_pred EEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~ 151 (165)
+||+-|+|....|-......-. ---+|.|+-.-+--+|..
T Consensus 88 lVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r 130 (341)
T KOG1163|consen 88 LVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR 130 (341)
T ss_pred eeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh
Confidence 9999999865565554443221 113566665555555554
No 389
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=85.22 E-value=13 Score=33.45 Aligned_cols=113 Identities=17% Similarity=0.098 Sum_probs=67.2
Q ss_pred ceeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCce
Q 045250 35 LTIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSL 111 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~ 111 (165)
+-.+.+|-|-.-.|-.+... +| .|-||+--..--.-...-.....+...|.++|+.++- |..|--- ++-+++..-
T Consensus 175 ii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~H--P~IV~~~d~f~~~ds~Y 252 (475)
T KOG0615|consen 175 IISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSH--PNIVRIKDFFEVPDSSY 252 (475)
T ss_pred EeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCC--CCEEEEeeeeecCCceE
Confidence 45677888888877666554 56 7888875543211011113344556899999998866 4333222 233455669
Q ss_pred EEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhc
Q 045250 112 IGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~ 151 (165)
+||||++ ++ .|-+.+.+.+. . ..+..|+-+.+--+|..
T Consensus 253 mVlE~v~-GG-eLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~ 295 (475)
T KOG0615|consen 253 MVLEYVE-GG-ELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ 295 (475)
T ss_pred EEEEEec-Cc-cHHHHHHhccccccchhHHHHHHHHHHHHHHHHc
Confidence 9999999 44 55565555442 2 24556666666666654
No 390
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=85.06 E-value=9.5 Score=32.69 Aligned_cols=105 Identities=20% Similarity=0.060 Sum_probs=72.9
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCC--Cc
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRT--MS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e--~~ 110 (165)
..+-+|.|..-.||...+.+ | -.-||+..-. . .|. .+=...|..+|+.+. +|..|+..-.+ ..+ .+
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~-~----~~~--~~~l~~Ei~iL~~l~--~p~IV~~~G~~~~~~~~~~ 91 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELE-D----SPT--SESLEREIRILSRLN--HPNIVQYYGSSSSRENDEY 91 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecc-c----chh--HHHHHHHHHHHHhCC--CCCEEeeCCccccccCeee
Confidence 66778999999999999875 5 7888887633 1 122 333567777888887 46655543321 223 48
Q ss_pred eEEEecCCCCchHHHHHHHc-C-CCC----HHHHHHHHHHHHHHHhc
Q 045250 111 LIGMRYLEPPHIILRKGLIA-G-IKY----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~-g-~~~----~~~a~~iG~~La~~h~~ 151 (165)
-+.|||++ ..+|.+.+.. | ... ...+++|.+-|+-+|..
T Consensus 92 ~i~mEy~~--~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~ 136 (313)
T KOG0198|consen 92 NIFMEYAP--GGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK 136 (313)
T ss_pred EeeeeccC--CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 89999999 4577777765 3 332 26889999999999944
No 391
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=84.68 E-value=0.92 Score=41.20 Aligned_cols=106 Identities=15% Similarity=0.181 Sum_probs=71.7
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC--CCceEEEEcCC-Cc
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPD--HVPEVYHFDRT-MS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~--~vP~v~~~D~e-~~ 110 (165)
.++++|||..--||+...- .| -|-||+..-.... ..--=+..|..+|+.+.+. |. ..=+ ...|.+ .-
T Consensus 14 ~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s------~ee~~nLREvksL~kln~h-pniikL~E-vi~d~~~~L 85 (538)
T KOG0661|consen 14 VIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS------WEECMNLREVKSLRKLNPH-PNIIKLKE-VIRDNDRIL 85 (538)
T ss_pred HHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc------HHHHHHHHHHHHHHhcCCC-CcchhhHH-HhhccCceE
Confidence 5678999999999999865 45 6777877655532 1223457788889888865 22 1222 234666 66
Q ss_pred eEEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t 152 (165)
-||||+.. .+|.+.+... +.| -++..||-.-|+-+|.++
T Consensus 86 ~fVfE~Md---~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G 130 (538)
T KOG0661|consen 86 YFVFEFMD---CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG 130 (538)
T ss_pred eeeHHhhh---hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 79999997 4777655443 233 257778888888888765
No 392
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=84.60 E-value=6.4 Score=33.99 Aligned_cols=107 Identities=14% Similarity=0.093 Sum_probs=72.3
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC---
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT--- 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e--- 108 (165)
.++.+|+|.--.||++... +| -|.+|..+-.... ++ .+.=+..|..+|+.+..-++ +-.++.+ +.+
T Consensus 15 ~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~--EG---~P~taiREisllk~L~~~~~--iv~L~dv~~~~~~~~ 87 (323)
T KOG0594|consen 15 KVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE--EG---VPSTAIREISLLKRLSHANH--IVRLHDVIHTSNNHR 87 (323)
T ss_pred HHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc--cC---CCchhhHHHHHHHHhCCCcc--eEEEEeeeeeccccc
Confidence 5677999999999999875 56 6777766544331 22 23446779999999988654 3223221 222
Q ss_pred ---CceEEEecCCCCchHHHHHHHcCC-----C----CHHHHHHHHHHHHHHHhcc
Q 045250 109 ---MSLIGMRYLEPPHIILRKGLIAGI-----K----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ---~~~~vMEdl~~~~~~lr~~l~~g~-----~----~~~~a~~iG~~La~~h~~t 152 (165)
.-.+|||++. .+|++.+.... . ...+..||-+.|+-.|.+.
T Consensus 88 ~~~~l~lvfe~~d---~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~ 140 (323)
T KOG0594|consen 88 GIGKLYLVFEFLD---RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG 140 (323)
T ss_pred ccceEEEEEEeec---ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3458999997 47888777643 1 2367788888888888764
No 393
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=83.89 E-value=18 Score=35.41 Aligned_cols=79 Identities=22% Similarity=0.173 Sum_probs=55.0
Q ss_pred CCCcce-eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--
Q 045250 31 KFDDLT-IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-- 105 (165)
Q Consensus 31 ~~~~~~-v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-- 105 (165)
+...++ .+.++-||--+||++... +| -..||--.|-.-.. +-...|+++|+..... -++++.|++
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d--------eEiE~eynil~~~~~h--pnv~~fyg~~~ 86 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE--------EEIELEYNMLKKYSHH--PNVATFYGAFI 86 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc--------HHHHHHHHHHHhccCC--CCcceEEEEEE
Confidence 444564 566788999999999976 34 56667666555431 5788899999887654 245555544
Q ss_pred -----cCCCceEEEecCCC
Q 045250 106 -----DRTMSLIGMRYLEP 119 (165)
Q Consensus 106 -----D~e~~~~vMEdl~~ 119 (165)
..+.--||||+|+.
T Consensus 87 k~~~~~~DqLWLVMEfC~g 105 (953)
T KOG0587|consen 87 KKDPGNGDQLWLVMEFCGG 105 (953)
T ss_pred EecCCCCCeEEEEeeccCC
Confidence 34777899999995
No 394
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=83.78 E-value=15 Score=33.43 Aligned_cols=115 Identities=13% Similarity=0.118 Sum_probs=61.4
Q ss_pred eeEeccCCceeEEEEEEe-----------------CCC-eEEEEecCccccccCCCC-------CCChHHHHHHHHHHHH
Q 045250 36 TIKEVGDGNLNFVYIVVG-----------------TSG-SFVIKQALPYVRCIGESW-------PMTKERAYFEALALKE 90 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~-----------------~~g-svIvKqa~p~~r~~~~~~-------~l~~~R~~~E~~~L~~ 90 (165)
....||.|..-.||+... .++ .|+||+-...-.....++ .-..+....|...+..
T Consensus 149 i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~ 228 (507)
T PLN03224 149 LRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAK 228 (507)
T ss_pred EeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHH
Confidence 557789999999999753 123 688887432110000001 0122344456666655
Q ss_pred hhcc--CCCCCceEEEE----------cCCCceEEEecCCCCchHHHHHHH---------------cCCCC---------
Q 045250 91 HGKL--CPDHVPEVYHF----------DRTMSLIGMRYLEPPHIILRKGLI---------------AGIKY--------- 134 (165)
Q Consensus 91 ~~~~--~p~~vP~v~~~----------D~e~~~~vMEdl~~~~~~lr~~l~---------------~g~~~--------- 134 (165)
+..- ....+.+.+.| +.....+||||.+. .+|.+.|. .|...
T Consensus 229 l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~--gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~ 306 (507)
T PLN03224 229 IKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESD--ATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKR 306 (507)
T ss_pred hhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCC--CcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccC
Confidence 5431 22223333322 34567899999983 34444332 22211
Q ss_pred -----HHHHHHHHHHHHHHHhcc
Q 045250 135 -----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 135 -----~~~a~~iG~~La~~h~~t 152 (165)
-.++.++...|..+|...
T Consensus 307 ~~~~~~~i~~ql~~aL~~lH~~~ 329 (507)
T PLN03224 307 DINVIKGVMRQVLTGLRKLHRIG 329 (507)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC
Confidence 135677788888888764
No 395
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=82.59 E-value=9.4 Score=34.66 Aligned_cols=104 Identities=13% Similarity=-0.007 Sum_probs=74.2
Q ss_pred EeccCCceeEEEEEEeCCC------eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 045250 38 KEVGDGNLNFVYIVVGTSG------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM 109 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~g------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~ 109 (165)
..||.|+.--||+.....+ .|-||+...--. .-......+..||++|+.+.- .+|-++|+ .|.+-
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~----~~~~~~~e~m~EArvMr~l~H---~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE----LTKEQIKEFMKEARVMRQLNH---PNVVRFYGVAVLEEP 235 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeeccccc----ccHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEcCCCc
Confidence 6899999999999987632 267888774111 112445688899999988543 45677777 78899
Q ss_pred ceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHh
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~ 150 (165)
..+|||.++ +..|.+.|.+... . -.++-+.+.=|.-+|.
T Consensus 236 l~ivmEl~~--gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~ 280 (474)
T KOG0194|consen 236 LMLVMELCN--GGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHS 280 (474)
T ss_pred cEEEEEecC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH
Confidence 999999998 3489999988552 1 1456666666666665
No 396
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=79.05 E-value=8.5 Score=36.79 Aligned_cols=101 Identities=15% Similarity=0.111 Sum_probs=66.2
Q ss_pred EeccCCceeEEEEEEeCCC--eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEc--------
Q 045250 38 KEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFD-------- 106 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D-------- 106 (165)
..|..|-.-.||.+.+..+ .+.+|...--- .-.+.=+..|.++|+.+... |-| =++|
T Consensus 43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d-------e~~L~~v~~EI~~MK~L~gh-----~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVND-------EEALNAVKREIDIMKLLSGH-----KNIVSYIDSSAINRSS 110 (738)
T ss_pred EEEccCCcEEEEEEEecCCCceeeeeeeecCC-------HHHHHHHHHHHHHHHHhcCC-----CceeeEeccccccccC
Confidence 3466777788999999855 67777665321 23456688899999999765 222 2334
Q ss_pred ---CCCceEEEecCCCCchHHHHHHH----cCC-CC--HHHHHHHHHHHHHHHhcc
Q 045250 107 ---RTMSLIGMRYLEPPHIILRKGLI----AGI-KY--PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 107 ---~e~~~~vMEdl~~~~~~lr~~l~----~g~-~~--~~~a~~iG~~La~~h~~t 152 (165)
.-..++.||||. ++ .|-+.|. .+- .. -.+..++.+.+|.+|...
T Consensus 111 ~~~~~EvllLmEyC~-gg-~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~ 164 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCK-GG-SLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK 164 (738)
T ss_pred CCceeEEEeehhhcc-CC-cHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC
Confidence 234579999999 32 3334443 331 11 267888899999999875
No 397
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=78.75 E-value=23 Score=29.72 Aligned_cols=88 Identities=10% Similarity=-0.110 Sum_probs=56.1
Q ss_pred EEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC-CCceEEE--------EcCCCceEEEecCC
Q 045250 48 VYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPD-HVPEVYH--------FDRTMSLIGMRYLE 118 (165)
Q Consensus 48 v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~-~vP~v~~--------~D~e~~~~vMEdl~ 118 (165)
+..|.+++|..|+|.-. ..+.+|......++..+.+. .. .||.++. -..+...++|+.++
T Consensus 21 ~~~~~t~~g~y~Lk~~e----------~~~~~~l~f~~~~~~~L~~~-G~~~v~~~i~tk~G~~~~~~~g~~y~L~~w~~ 89 (313)
T TIGR02905 21 YEAFRANNQAYLIVPVD----------GLEEEELAELMAMSDYLQQA-GDETVLELVKTKFGQSSALIDGVSYYLFKAPE 89 (313)
T ss_pred eeeEEeCCceEEEEEec----------CCCHHHHHHHHHHHHHHHHc-CCCcccceeecCCCCEeEEECCEEEEEEeCCC
Confidence 55667777888888654 24557899999999888663 11 2444332 22344445555543
Q ss_pred CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCch
Q 045250 119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTT 160 (165)
Q Consensus 119 ~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~ 160 (165)
|..... ..+|+.||++|..|.+|..+..
T Consensus 90 ------------~~~~~~--~~~~~~LA~lH~as~~f~~~~~ 117 (313)
T TIGR02905 90 ------------FNERRG--VDLGRELATFHKRGRQYPRPIW 117 (313)
T ss_pred ------------cccchh--HHHHHHHHHHHHhcCCCCCCcc
Confidence 222111 3999999999999998866543
No 398
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=76.41 E-value=28 Score=30.50 Aligned_cols=109 Identities=16% Similarity=0.114 Sum_probs=73.7
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTMSLI 112 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~~~~ 112 (165)
-++.+|-|..--||.|... ++ -.-+|+-.-.. ++. .-.......|+.+|..+. .|-.|.-.|.| |++.-.+
T Consensus 29 ~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~-iv~---~~e~~~~~~Er~IL~~v~--hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 29 ILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK-IVE---KKEVRHTKAERNILSKIK--HPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred eeeeeeccCCceEEEEEEcccCceeehhhhhhhH-hhh---hhhHHHHHHHHHHHHhCC--CCcEeeeEEecccCCeEEE
Confidence 4677899999999999765 33 34444433221 111 134678889999998843 38888888866 6677778
Q ss_pred EEecCCCCchHHHHHHHcCCCCH-H----HHHHHHHHHHHHHhcc
Q 045250 113 GMRYLEPPHIILRKGLIAGIKYP-L----LAEHMSEFMAKTLFYT 152 (165)
Q Consensus 113 vMEdl~~~~~~lr~~l~~g~~~~-~----~a~~iG~~La~~h~~t 152 (165)
|+||++ +..|+..|.+...|+ . -+.+|..+|.-+|...
T Consensus 103 Vld~~~--GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~g 145 (357)
T KOG0598|consen 103 VLDYLN--GGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKG 145 (357)
T ss_pred EEeccC--CccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCC
Confidence 999998 347778887544443 2 3567788888888654
No 399
>PHA02882 putative serine/threonine kinase; Provisional
Probab=75.90 E-value=25 Score=28.40 Aligned_cols=113 Identities=12% Similarity=0.020 Sum_probs=57.6
Q ss_pred Ccce-eEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCC--CChHHHHHHHHHHH---HhhccCCCCCce
Q 045250 33 DDLT-IKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWP--MTKERAYFEALALK---EHGKLCPDHVPE 101 (165)
Q Consensus 33 ~~~~-v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~--l~~~R~~~E~~~L~---~~~~~~p~~vP~ 101 (165)
..+. .+.||.|....||++...+ + .+++|...- . ..... ....+...+....+ .+..+.-..+|.
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~--~--~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENL--E--NETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccc--c--CCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 3454 4568999999999998653 2 456664221 1 01000 00111111222222 222222335677
Q ss_pred EEEEcCC------CceEEEecCCCCchHHHHHHHcCCC-----CHHHHHHHHHHHHHHHhcc
Q 045250 102 VYHFDRT------MSLIGMRYLEPPHIILRKGLIAGIK-----YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 102 v~~~D~e------~~~~vMEdl~~~~~~lr~~l~~g~~-----~~~~a~~iG~~La~~h~~t 152 (165)
++..... ...++||.+.+. +++.+..... ...++.++...|+-+|...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 146 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLVEN---TKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHG 146 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhccC---HHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 6653222 235788888732 2332222211 1358889999999999864
No 400
>PF10309 DUF2414: Protein of unknown function (DUF2414); InterPro: IPR019416 This entry contains proteins that have no known function.
Probab=73.62 E-value=7.9 Score=25.42 Aligned_cols=38 Identities=16% Similarity=0.288 Sum_probs=30.5
Q ss_pred ccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEE
Q 045250 6 FRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYI 50 (165)
Q Consensus 6 ~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~r 50 (165)
-..|+.++|..|+.+. + .......|+=|-|-.+|.||.
T Consensus 13 vd~lsT~dI~~y~~~y--~-----~~~~~~~IEWIdDtScNvvf~ 50 (62)
T PF10309_consen 13 VDELSTDDIKAYFSEY--F-----DEEGPFRIEWIDDTSCNVVFK 50 (62)
T ss_pred CCCCCHHHHHHHHHHh--c-----ccCCCceEEEecCCcEEEEEC
Confidence 3579999999999986 1 134467999999999999985
No 401
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=71.68 E-value=18 Score=34.17 Aligned_cols=102 Identities=18% Similarity=0.098 Sum_probs=68.2
Q ss_pred ceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cCCCc
Q 045250 35 LTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF---DRTMS 110 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~e~~ 110 (165)
+=++.||.|..--|-.+....+ .|-||--+|-.-..+ ..-...|+++|.++ +. | .+-+++.. | |-.
T Consensus 541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~------r~~F~kEIkiLsqL-kh-P-NIveLvGVC~~D-ePi 610 (807)
T KOG1094|consen 541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNA------RNDFLKEIKILSRL-KH-P-NIVELLGVCVQD-DPL 610 (807)
T ss_pred ehhhhhcCcccceeEEEEecCceEEEEeecCcccchhH------HHHHHHHHHHHhcc-CC-C-CeeEEEeeeecC-Cch
Confidence 3567788888888877777665 677777666554321 23345677788766 32 2 34455655 5 566
Q ss_pred eEEEecCCCCchHHHHHHHcCCC-------CHHHHHHHHHHHHHH
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIK-------YPLLAEHMSEFMAKT 148 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~-------~~~~a~~iG~~La~~ 148 (165)
.+||||.. ...|+++|++.+. --.+|.+|+.-||-+
T Consensus 611 cmI~EYmE--nGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYL 653 (807)
T KOG1094|consen 611 CMITEYME--NGDLNQFLSAHELPTAETAPGVSICTQIASGMAYL 653 (807)
T ss_pred HHHHHHHh--cCcHHHHHHhccCcccccchhHHHHHHHHHHHHHH
Confidence 78999998 4699999999743 136888887766544
No 402
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=71.25 E-value=24 Score=31.22 Aligned_cols=105 Identities=18% Similarity=0.159 Sum_probs=69.1
Q ss_pred eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCC---ceEEEEcCCCc
Q 045250 36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHV---PEVYHFDRTMS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v---P~v~~~D~e~~ 110 (165)
.+-.|+.|.--.|||+.+.. + =|-+|.-..--. ..++|++. ..|..+|..++ + |..| =-|..-+-+.-
T Consensus 80 ~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmeke--k~GFPIts---LREIniLl~~~-H-~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 80 KLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE--KEGFPITS---LREINILLKAR-H-PNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred HHhhcccCcceeEEEeccCCcceeEEeeecccccc--cCCCcchh---HHHHHHHHhcC-C-CCeeeeEEEEecccccee
Confidence 45678899999999999873 3 466666555443 35688876 55888887776 2 4322 23556677788
Q ss_pred eEEEecCCCCchHHHHHHHcCC-CC-HH----HHHHHHHHHHHHHh
Q 045250 111 LIGMRYLEPPHIILRKGLIAGI-KY-PL----LAEHMSEFMAKTLF 150 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~-~~-~~----~a~~iG~~La~~h~ 150 (165)
-+||||+. .+||..|.... .| +. +..|+-+-+.-+|.
T Consensus 153 y~VMe~~E---hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~ 195 (419)
T KOG0663|consen 153 YIVMEYVE---HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHD 195 (419)
T ss_pred eeeHHHHH---hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhh
Confidence 89999997 37877776644 33 22 44455555555554
No 403
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=70.95 E-value=2.7 Score=36.34 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=36.2
Q ss_pred CCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250 96 PDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 96 p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t 152 (165)
...||+|+.-|.++..+++|||| +-..| +.+ |...++--.+-+..|+.+|-..
T Consensus 81 Gv~vPqIla~Dld~GfllLedLG-~e~~l-~~~--g~~~~ery~~a~~ll~~~h~~~ 133 (351)
T COG3178 81 GVRVPQILAADLDQGFLLLEDLG-RETFL-QAL--GEPIAERYAAADALLAAAHGAL 133 (351)
T ss_pred CcCccHHhhhchhcCchhHhhcC-cHHHH-Hhc--CCCchhHHHHHHHHHHHHhcCc
Confidence 56899999999999999999999 34333 322 4433332335566777777544
No 404
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=69.74 E-value=24 Score=32.82 Aligned_cols=106 Identities=17% Similarity=0.123 Sum_probs=66.0
Q ss_pred eEeccCCceeEEEEEEeCC-C-eEEEEecCcc-c-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCc
Q 045250 37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPY-V-RCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMS 110 (165)
Q Consensus 37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~-~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~ 110 (165)
-+.+|+|--.-|||.+..+ + .+-||--.-. + |- --+.-..+|.++|+.+..+ |+.+ ++| |.|+++-
T Consensus 78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike------~KvkYV~~Ek~~l~~L~~h-Pgiv-kLy~TFQD~~sL 149 (604)
T KOG0592|consen 78 GKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKE------KKVKYVTREKEALTQLSGH-PGIV-KLYFTFQDEESL 149 (604)
T ss_pred hheeccccceeEEEeeecCCCceeeHhhhhHHHHHhh------cccchhhHHHHHHHHhhCC-CCeE-EEEEEeecccce
Confidence 3578999999999998752 2 3333332211 1 10 0113456789999999865 5443 333 5688888
Q ss_pred eEEEecCCCCchHHHHHHHc-CCCC----HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIA-GIKY----PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~-g~~~----~~~a~~iG~~La~~h~~t 152 (165)
-|||||.+ ++ .|=+.|.+ |..+ ...|++|-..|=-+|...
T Consensus 150 YFvLe~A~-nG-dll~~i~K~Gsfde~caR~YAAeIldAleylH~~G 194 (604)
T KOG0592|consen 150 YFVLEYAP-NG-DLLDLIKKYGSFDETCARFYAAEILDALEYLHSNG 194 (604)
T ss_pred EEEEEecC-CC-cHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999 45 44454544 4433 246777877777777643
No 405
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=65.34 E-value=43 Score=31.00 Aligned_cols=132 Identities=16% Similarity=0.169 Sum_probs=87.0
Q ss_pred HhhHHHHHHhCCCcccccCCCC--Cc-ceeEeccCCceeEEEEEEeCCC-e-E---EEEecCccccccCCCCCCChHHHH
Q 045250 11 DKSLLEYIKATPSLSSKIGNKF--DD-LTIKEVGDGNLNFVYIVVGTSG-S-F---VIKQALPYVRCIGESWPMTKERAY 82 (165)
Q Consensus 11 ~~~v~~Yl~~~~~~~~~~~~~~--~~-~~v~~l~~Gn~N~v~rV~~~~g-s-v---IvKqa~p~~r~~~~~~~l~~~R~~ 82 (165)
.++..||-+.= .=+-++|..+ +. ..++.||+|....||...+..+ + | |||-|.-|.. =..
T Consensus 55 qE~~~dY~kGG-YHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtE-----------aAl 122 (590)
T KOG1290|consen 55 QEDPEDYRKGG-YHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTE-----------AAL 122 (590)
T ss_pred ccChhhhhcCC-CceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHH-----------HHH
Confidence 46678887641 1122445422 33 4889999999999999999865 2 3 5666666653 356
Q ss_pred HHHHHHHHhhccCCC-----CCceEEEEcC------CCceEEEecCCCCchHHHHHHH---cCCCC---HHHHHHHHHHH
Q 045250 83 FEALALKEHGKLCPD-----HVPEVYHFDR------TMSLIGMRYLEPPHIILRKGLI---AGIKY---PLLAEHMSEFM 145 (165)
Q Consensus 83 ~E~~~L~~~~~~~p~-----~vP~v~~~D~------e~~~~vMEdl~~~~~~lr~~l~---~g~~~---~~~a~~iG~~L 145 (165)
-|.+.|+.++.--|. .|-+++.+-. ..-++|+|+|++ -.||-... +|-.. ..++.||-.-|
T Consensus 123 DEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGd--nLLklI~~s~YrGlpl~~VK~I~~qvL~GL 200 (590)
T KOG1290|consen 123 DEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGD--NLLKLIKYSNYRGLPLSCVKEICRQVLTGL 200 (590)
T ss_pred HHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhh--HHHHHHHHhCCCCCcHHHHHHHHHHHHHHH
Confidence 789999999887653 5777774433 345789999994 23322222 23322 47899999999
Q ss_pred HHHHhcccccc
Q 045250 146 AKTLFYTSLLY 156 (165)
Q Consensus 146 a~~h~~tsd~~ 156 (165)
--+|....-.+
T Consensus 201 dYLH~ecgIIH 211 (590)
T KOG1290|consen 201 DYLHRECGIIH 211 (590)
T ss_pred HHHHHhcCccc
Confidence 99998775443
No 406
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=65.33 E-value=9.4 Score=33.88 Aligned_cols=105 Identities=21% Similarity=0.269 Sum_probs=68.8
Q ss_pred ccCCceeEEEEEEeCCC-eEEEE-------------ecCccccc--cCCCC-CCChHHHHHHHHHHHHhhccCCCCCceE
Q 045250 40 VGDGNLNFVYIVVGTSG-SFVIK-------------QALPYVRC--IGESW-PMTKERAYFEALALKEHGKLCPDHVPEV 102 (165)
Q Consensus 40 l~~Gn~N~v~rV~~~~g-svIvK-------------qa~p~~r~--~~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v 102 (165)
||=|-=.-||.|.+..| .+|+| --+.|+|. .+ +| .|+.==+..|..+|+.+... .-.||++
T Consensus 100 IGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~-sWlyLSRlaa~kEfafmkaL~e~-gfpVPkp 177 (465)
T KOG2268|consen 100 IGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSG-SWLYLSRLAATKEFAFMKALYER-GFPVPKP 177 (465)
T ss_pred cccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCcc-chhhhHHHHHHHHHHHHHHHHHc-CCCCCCc
Confidence 44444455777777766 56655 44566642 32 46 56655677899999999885 5678998
Q ss_pred EEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 045250 103 YHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 103 ~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ 151 (165)
+ |-..|++|||.+. +-+|++.= .-...|.+...+-.++.++-.+
T Consensus 178 i--D~~RH~Vvmelv~--g~Pl~~v~-~v~d~~~ly~~lm~~Iv~la~~ 221 (465)
T KOG2268|consen 178 I--DHNRHCVVMELVD--GYPLRQVR-HVEDPPTLYDDLMGLIVRLANH 221 (465)
T ss_pred c--cccceeeHHHhhc--ccceeeee-ecCChHHHHHHHHHHHHHHHHc
Confidence 8 7789999999997 34665521 1123357777777777666544
No 407
>PHA03210 serine/threonine kinase US3; Provisional
Probab=64.89 E-value=39 Score=30.19 Aligned_cols=111 Identities=9% Similarity=-0.024 Sum_probs=59.2
Q ss_pred eeEeccCCceeEEEEEEeCC--C-eEEEE------ecCccc----cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE
Q 045250 36 TIKEVGDGNLNFVYIVVGTS--G-SFVIK------QALPYV----RCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV 102 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~--g-svIvK------qa~p~~----r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v 102 (165)
-+..||.|..--||++.... + ..++| +..++. ...-..-.-...+...|.++|+.+.. | ++.++
T Consensus 152 ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~H--p-nIv~l 228 (501)
T PHA03210 152 VIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNH--E-NILKI 228 (501)
T ss_pred EEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCC--C-CcCcE
Confidence 35789999999999876532 1 12212 111111 00000001123345677778877643 2 34444
Q ss_pred E--EEcCCCceEEEecCCCCchHHHHHHHcCCC----------CHHHHHHHHHHHHHHHhcc
Q 045250 103 Y--HFDRTMSLIGMRYLEPPHIILRKGLIAGIK----------YPLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 103 ~--~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~----------~~~~a~~iG~~La~~h~~t 152 (165)
+ +.+.+...++||+++ + .+...+..+.. ...++.+|...|.-+|...
T Consensus 229 ~~~~~~~~~~~lv~e~~~--~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g 287 (501)
T PHA03210 229 EEILRSEANTYMITQKYD--F-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK 287 (501)
T ss_pred eEEEEECCeeEEEEeccc--c-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 3 345667788999886 2 33343433221 1147788889999999654
No 408
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=63.96 E-value=31 Score=30.31 Aligned_cols=103 Identities=17% Similarity=0.207 Sum_probs=67.2
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT----- 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e----- 108 (165)
..+.+|-|....||+.... .+ .+.||.-.+--|- ...|..+|+.+. + |..|==+|+|-..
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-----------knrEl~im~~l~-H-pNIV~L~~~f~~~~~~d~ 94 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-----------KNRELQIMRKLD-H-PNIVRLLYFFSSSTESDE 94 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-----------CcHHHHHHHhcC-C-cCeeeEEEEEEecCCCch
Confidence 5677899999999999875 33 8999998876663 235888888322 2 5555555555332
Q ss_pred -CceEEEecCCC-CchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250 109 -MSLIGMRYLEP-PHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 109 -~~~~vMEdl~~-~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
---+||||+|. -+..+|+.-..+... .-..-||-+.|+-+|..
T Consensus 95 ~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~ 144 (364)
T KOG0658|consen 95 VYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH 144 (364)
T ss_pred hHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc
Confidence 23489999994 123334322234332 24677888899999874
No 409
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=63.67 E-value=53 Score=28.90 Aligned_cols=104 Identities=18% Similarity=0.156 Sum_probs=64.7
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCC-c
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTM-S 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~-~ 110 (165)
.+..||.||.-.||+|.-. ++ =+.+|-- ++.. -+....-...|.++|+.. ...++-..| ||++.. -
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I--~~~~----~~~~~~Qi~rEl~il~~~---~spyIV~~ygaF~~~~~~i 153 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVI--LLNI----DPALQKQILRELEILRSC---QSPYIVGFYGAFYSNGEEI 153 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEee--cccC----CHHHHHHHHHHHHHHhhC---CCCCeeeEeEEEEeCCceE
Confidence 6788999999999999876 34 3444433 1111 012223345566677655 334555555 345553 6
Q ss_pred eEEEecCCCCchHHHHHHHc-CCCC----HHHHHHHHHHHHHHHh
Q 045250 111 LIGMRYLEPPHIILRKGLIA-GIKY----PLLAEHMSEFMAKTLF 150 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~-g~~~----~~~a~~iG~~La~~h~ 150 (165)
.++|||.. ...|.+.+.+ |.+. ..+|.++=+-|.-+|.
T Consensus 154 sI~mEYMD--gGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~ 196 (364)
T KOG0581|consen 154 SICMEYMD--GGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHE 196 (364)
T ss_pred EeehhhcC--CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 79999997 4577777765 4443 3677777777777774
No 410
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=62.30 E-value=29 Score=28.35 Aligned_cols=100 Identities=20% Similarity=0.185 Sum_probs=62.6
Q ss_pred eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM 114 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM 114 (165)
..+.||.|.-..||...+.+. .+| |+..+|..+.+--.| +-...|.-.|+.+..---...-.++|-| ..-++|+
T Consensus 6 kmekigegtygtvfkarn~~t~eiv---alkrvrlddddegvp-ssalreicllkelkhknivrl~dvlhsd-kkltlvf 80 (292)
T KOG0662|consen 6 KMEKIGEGTYGTVFKARNRETHEIV---ALKRVRLDDDDEGVP-SSALREICLLKELKHKNIVRLHDVLHSD-KKLTLVF 80 (292)
T ss_pred HHHhhcCCcceeeEecccCCccceE---EEEEEeccCCCCCCc-HHHHHHHHHHHHhhhcceeehhhhhccC-ceeEEeH
Confidence 456799999999999987643 332 344555533333333 3466777777766442111223344444 5568999
Q ss_pred ecCCCCchHHHHHHH--cCCCCHHHHHHHHH
Q 045250 115 RYLEPPHIILRKGLI--AGIKYPLLAEHMSE 143 (165)
Q Consensus 115 Edl~~~~~~lr~~l~--~g~~~~~~a~~iG~ 143 (165)
|++. ..||.... +|.+++.+++..--
T Consensus 81 e~cd---qdlkkyfdslng~~d~~~~rsfml 108 (292)
T KOG0662|consen 81 EFCD---QDLKKYFDSLNGDLDPEIVRSFML 108 (292)
T ss_pred HHhh---HHHHHHHHhcCCcCCHHHHHHHHH
Confidence 9997 56777664 47888888876643
No 411
>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A.
Probab=61.33 E-value=14 Score=30.13 Aligned_cols=42 Identities=19% Similarity=0.366 Sum_probs=31.8
Q ss_pred CCccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCc--eeEEEEEEeC
Q 045250 4 TEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGN--LNFVYIVVGT 54 (165)
Q Consensus 4 ~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn--~N~v~rV~~~ 54 (165)
..|+.++...+..||++. +.+++-++|-+.|+ ++.+|.|.+.
T Consensus 39 P~F~n~~~~qAe~~L~~~---------~~Ge~iIRPSSkG~dhL~vTwKv~d~ 82 (220)
T PF14633_consen 39 PLFKNFNYKQAEEYLADQ---------DVGEVIIRPSSKGPDHLTVTWKVADG 82 (220)
T ss_dssp TTEESS-HHHHHHHHCCS----------TT-EEEEE-TTTTTEEEEEEEEETT
T ss_pred CCccCCCHHHHHHHHhcC---------CCCCEEEeeCCCCCCeEEEEEEEcCC
Confidence 368899999999999875 35678999999987 8888888864
No 412
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=61.24 E-value=3.5 Score=29.98 Aligned_cols=59 Identities=15% Similarity=0.166 Sum_probs=45.3
Q ss_pred CcceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce
Q 045250 33 DDLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE 101 (165)
Q Consensus 33 ~~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~ 101 (165)
+.+.-+|++.|.+--|+|.++.+| .|+||--.|.++ ++....-+.|+.+..++....|.
T Consensus 12 ~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~----------~~i~~Dl~~l~~~~~~~~~~~~~ 71 (119)
T PF03109_consen 12 DEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIE----------EQIEADLRILRRLARLLERLPPF 71 (119)
T ss_pred HHCCcchhhheehhhheeeeecccchhhhhhcchHHH----------HHHHHHHHHHHHHHHHHHHcccc
Confidence 345678899999999999999878 999999999987 35666667777777764443333
No 413
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=60.25 E-value=6.9 Score=34.68 Aligned_cols=62 Identities=21% Similarity=0.322 Sum_probs=37.4
Q ss_pred hhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHH
Q 045250 12 KSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEAL 86 (165)
Q Consensus 12 ~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~ 86 (165)
.++++++++...+ +.+.-+---+=||-+||+||..... .+.+.++. ...|.++.....-|..
T Consensus 204 ~GLL~a~~~~~~L------t~~qk~~l~VMGGEsNYLfr~~~~~-----~~~L~~v~--~~~W~~~~m~~W~~~d 265 (408)
T PF06437_consen 204 HGLLDAFKDSTDL------TPEQKSNLYVMGGESNYLFRYDPES-----PHGLEFVP--REEWLLPEMKTWSEED 265 (408)
T ss_pred HHHHHHHHhccCC------CHHHhcCEEEecccceeEEEecCCC-----CCCeEEcc--HHhccCccccCcCHHH
Confidence 4677777765322 2223333345599999999998763 23333443 3578888766666655
No 414
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=58.54 E-value=36 Score=31.08 Aligned_cols=95 Identities=17% Similarity=0.098 Sum_probs=56.6
Q ss_pred EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC--CCceEEEEcCCCceEE
Q 045250 38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPD--HVPEVYHFDRTMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~--~vP~v~~~D~e~~~~v 113 (165)
+-+|.|.-.-|=+.... .| -|-||--+ +-++.+ ..+.-|.+.|.++|..++- |. .+-+ .|-+.+--++|
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIr-KdkIkd---eqDlvhIRREIeIMSsLNH--PhII~IyE-VFENkdKIviv 131 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIR-KDKIKD---EQDLVHIRREIEIMSSLNH--PHIIQIYE-VFENKDKIVIV 131 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhh-hhhccc---HHHHHHHHHHHHHHhhcCC--Cceeehhh-hhcCCceEEEE
Confidence 34667766655555442 33 45555433 111111 3677899999999988765 11 1122 24466788999
Q ss_pred EecCCCCchHHHHHHHcCCC-CHHHHHHH
Q 045250 114 MRYLEPPHIILRKGLIAGIK-YPLLAEHM 141 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~-~~~~a~~i 141 (165)
|||-+ ...|.+.+.+... ...-|+++
T Consensus 132 MEYaS--~GeLYDYiSer~~LsErEaRhf 158 (668)
T KOG0611|consen 132 MEYAS--GGELYDYISERGSLSEREARHF 158 (668)
T ss_pred EEecC--CccHHHHHHHhccccHHHHHHH
Confidence 99999 3478888877443 33444444
No 415
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=53.94 E-value=14 Score=35.37 Aligned_cols=51 Identities=24% Similarity=0.110 Sum_probs=36.3
Q ss_pred HHHHHHHHhhccCCCCCceEEE--EcCCCceEEEecCCCCchHHHHHHHcCCCCH-HHH
Q 045250 83 FEALALKEHGKLCPDHVPEVYH--FDRTMSLIGMRYLEPPHIILRKGLIAGIKYP-LLA 138 (165)
Q Consensus 83 ~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~-~~a 138 (165)
.|..+|..+. ..-|-++|+ -|.++--|||+|++ +.++-..|++..+|+ ++|
T Consensus 678 AERDILAEAD---n~WVVrLyySFQDkdnLYFVMdYIP--GGDmMSLLIrmgIFeE~LA 731 (1034)
T KOG0608|consen 678 AERDILAEAD---NEWVVRLYYSFQDKDNLYFVMDYIP--GGDMMSLLIRMGIFEEDLA 731 (1034)
T ss_pred hhhhhHhhcC---CcceEEEEEEeccCCceEEEEeccC--CccHHHHHHHhccCHHHHH
Confidence 4555664433 345677774 58899999999999 457888999988885 444
No 416
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=51.12 E-value=23 Score=32.00 Aligned_cols=70 Identities=24% Similarity=0.356 Sum_probs=40.9
Q ss_pred CCceeEEEEEEeCCC-eEEEEe----------cCccccccCCCCCCCh----------HHHHHHHH--HHHHhhcc-CCC
Q 045250 42 DGNLNFVYIVVGTSG-SFVIKQ----------ALPYVRCIGESWPMTK----------ERAYFEAL--ALKEHGKL-CPD 97 (165)
Q Consensus 42 ~Gn~N~v~rV~~~~g-svIvKq----------a~p~~r~~~~~~~l~~----------~R~~~E~~--~L~~~~~~-~p~ 97 (165)
|.-+| ||+++..+| .+.||. ..-|+. | ++.+.- =|.+.|-+ -|++++.. +|.
T Consensus 155 GKEAN-VYHat~~dG~~~AIKIYKTSILvFKDRdRYV~--G-EfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~ 230 (520)
T KOG2270|consen 155 GKEAN-VYHATEEDGSEFAIKIYKTSILVFKDRDRYVS--G-EFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPC 230 (520)
T ss_pred Cccce-eEeeecCCCceEEEEEEeeeEEEEechhhhcc--c-eeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 55566 899998887 544443 333332 1 122221 23444544 46666653 454
Q ss_pred CCceEEEEcCCCceEEEecCCC
Q 045250 98 HVPEVYHFDRTMSLIGMRYLEP 119 (165)
Q Consensus 98 ~vP~v~~~D~e~~~~vMEdl~~ 119 (165)
.-|.++ .+|++||++||.
T Consensus 231 PePIlL----k~hVLVM~FlGr 248 (520)
T KOG2270|consen 231 PEPILL----KNHVLVMEFLGR 248 (520)
T ss_pred CCceee----ecceEeeeeccC
Confidence 445544 899999999995
No 417
>PF11588 DUF3243: Protein of unknown function (DUF3243); InterPro: IPR021637 This family of proteins with unknown function includes uncharacterised proteins ymfJ and yflH. The family appears to be restricted to Firmicutes.; PDB: 3D0W_B.
Probab=46.56 E-value=7.9 Score=26.83 Aligned_cols=28 Identities=18% Similarity=0.086 Sum_probs=17.9
Q ss_pred CchHHHHHHHc-----------CCCCHHHHHHHHHHHHH
Q 045250 120 PHIILRKGLIA-----------GIKYPLLAEHMSEFMAK 147 (165)
Q Consensus 120 ~~~~lr~~l~~-----------g~~~~~~a~~iG~~La~ 147 (165)
++..||+.|-+ ......+|.+||.|||.
T Consensus 6 nf~~wK~~Lg~~v~~ae~~Gms~e~i~~~A~~iGdyLA~ 44 (81)
T PF11588_consen 6 NFDQWKDFLGDRVEQAEKLGMSEETIANLAYQIGDYLAK 44 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT----HHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHh
Confidence 46677777754 23456799999999985
No 418
>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes. It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.
Probab=44.13 E-value=76 Score=26.84 Aligned_cols=30 Identities=13% Similarity=0.242 Sum_probs=18.3
Q ss_pred eeEeccCC--ceeEEEEEEeCCC---eEEEEecCc
Q 045250 36 TIKEVGDG--NLNFVYIVVGTSG---SFVIKQALP 65 (165)
Q Consensus 36 ~v~~l~~G--n~N~v~rV~~~~g---svIvKqa~p 65 (165)
+++-...| +.|.+|-++..++ .+|||.+.-
T Consensus 29 sv~~s~~g~ns~gv~fv~~f~~~~~~avViK~s~t 63 (275)
T PF09192_consen 29 SVHHSEHGVNSGGVFFVATFSGSKEEAVVIKFSST 63 (275)
T ss_dssp CEEEEEE-STTS-EEEEEETTE----EEEEE--TT
T ss_pred hHHhhccccCCCCEEEEEEcCCCceEEEEEecCCc
Confidence 66666677 7788877776642 899999853
No 419
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=41.99 E-value=1.2e+02 Score=30.14 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=64.3
Q ss_pred EeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 045250 38 KEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRY 116 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEd 116 (165)
.++|.|----||++...+| .++||+..|=. .|.+=..+...|.-=++....+.+.+ ..|- -.+.+++|+||
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~-----~WEfYI~~q~~~RLk~~~~~~~~~~~--~a~~-~~~~S~lv~ey 775 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPN-----PWEFYICLQVMERLKPQMLPSIMHIS--SAHV-FQNASVLVSEY 775 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCC-----ceeeeehHHHHHhhchhhhcchHHHH--HHHc-cCCcceeeeec
Confidence 5788888888999998888 89999998632 46665555544443222222221111 1121 24889999999
Q ss_pred CCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250 117 LEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 117 l~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~ 151 (165)
-+ +..|-+.+...+.. -.++-++-+.+=.+|..
T Consensus 776 ~~--~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~ 813 (974)
T KOG1166|consen 776 SP--YGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM 813 (974)
T ss_pred cc--cccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc
Confidence 98 66776766643321 24566666666666654
No 420
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=40.27 E-value=48 Score=29.34 Aligned_cols=73 Identities=8% Similarity=-0.034 Sum_probs=46.4
Q ss_pred ChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCC-HHHH----HHHHHHHHHHHhc
Q 045250 77 TKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKY-PLLA----EHMSEFMAKTLFY 151 (165)
Q Consensus 77 ~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~-~~~a----~~iG~~La~~h~~ 151 (165)
...|...|.+.+..........----++-|++++-+|||-+. ++..| +.+.+.+.| ..-| +.|+..|-=+|..
T Consensus 118 sR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~-GGplL-shI~~~~~F~E~EAs~vvkdia~aLdFlH~k 195 (463)
T KOG0607|consen 118 SRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMR-GGPLL-SHIQKRKHFNEREASRVVKDIASALDFLHTK 195 (463)
T ss_pred HHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEeccc-CchHH-HHHHHhhhccHHHHHHHHHHHHHHHHHHhhc
Confidence 446999999998877665221111125668899999999998 45555 556666655 3444 4455555555543
No 421
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=40.01 E-value=44 Score=31.96 Aligned_cols=109 Identities=17% Similarity=0.220 Sum_probs=64.8
Q ss_pred eeEeccCCceeEEEEEEeCCC--eEEEEecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCC--ceEEEEcCCCc
Q 045250 36 TIKEVGDGNLNFVYIVVGTSG--SFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGKLCPDHV--PEVYHFDRTMS 110 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~g--svIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v--P~v~~~D~e~~ 110 (165)
.+.+||.|....||-..+... .|-||-.- |. +-..+-| .-+..|.++|+.+.- |..+ -.+|. -+-.+
T Consensus 30 dLrEIGHGSFGAVYfArd~~n~evVAIKKMs-ySGKQs~EKW----qDIlKEVrFL~~l~H--PntieYkgCyL-re~Ta 101 (948)
T KOG0577|consen 30 DLREIGHGSFGAVYFARDVRNSEVVAIKKMS-YSGKQSNEKW----QDILKEVRFLRQLRH--PNTIEYKGCYL-REHTA 101 (948)
T ss_pred HHHHhcCCccceeEEeeccCccceeeeeecc-ccccccHHHH----HHHHHHHHHHHhccC--CCcccccceee-ccchH
Confidence 789999999999999988743 56666432 22 1111224 357788999987754 3221 12222 33567
Q ss_pred eEEEecCCCCchHHHHHHHcCCCC---HHHHHHHHHHHHHHHhcc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIKY---PLLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~~---~~~a~~iG~~La~~h~~t 152 (165)
-+|||||=+...++-+...++-.- ..++...-.-||-+|.++
T Consensus 102 WLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~ 146 (948)
T KOG0577|consen 102 WLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN 146 (948)
T ss_pred HHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 799999975444554444443222 344445555667777654
No 422
>COG1923 Hfq Uncharacterized host factor I protein [General function prediction only]
Probab=38.81 E-value=37 Score=23.25 Aligned_cols=28 Identities=25% Similarity=0.299 Sum_probs=21.4
Q ss_pred cCCceeEEEEEEeCCC-eEEEEecCcccc
Q 045250 41 GDGNLNFVYIVVGTSG-SFVIKQALPYVR 68 (165)
Q Consensus 41 ~~Gn~N~v~rV~~~~g-svIvKqa~p~~r 68 (165)
-.|.-||+-.+...+. .+|.|||...+.
T Consensus 36 V~sfD~f~VlL~~~g~qqlVYKHAISTi~ 64 (77)
T COG1923 36 VESFDNFVVLLKNTGKQQLVYKHAISTIV 64 (77)
T ss_pred EEeeeeEEEEEEcCCeeEEEEeeeeeEEc
Confidence 3578899966665544 899999998874
No 423
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=38.71 E-value=46 Score=29.78 Aligned_cols=107 Identities=14% Similarity=0.079 Sum_probs=65.1
Q ss_pred CcceeEeccCCceeEEEEEEeCC---C--eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEc
Q 045250 33 DDLTIKEVGDGNLNFVYIVVGTS---G--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFD 106 (165)
Q Consensus 33 ~~~~v~~l~~Gn~N~v~rV~~~~---g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D 106 (165)
.-.-+..+|.|....||...+-. + .|-+|.=. ..-.+.|...|-++|..++.. -..++-.. +-.
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~---------~ts~p~ri~~El~~L~~~gG~-~ni~~~~~~~rn 106 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIY---------RTSSPSRILNELEMLYRLGGS-DNIIKLNGCFRN 106 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeecc---------cccCchHHHHHHHHHHHhccc-hhhhcchhhhcc
Confidence 34578889999988888776643 2 45555322 234568999999999999774 11222221 124
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCCC--HHHHHHHHHHHHHHHhc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIKY--PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~--~~~a~~iG~~La~~h~~ 151 (165)
.++-++||||++ +...++.+..=... ..-...+-..|+.+|..
T Consensus 107 nd~v~ivlp~~~--H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~ 151 (418)
T KOG1167|consen 107 NDQVAIVLPYFE--HDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKN 151 (418)
T ss_pred CCeeEEEecccC--ccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhcc
Confidence 577889999998 55666655442211 12334455556666654
No 424
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=38.51 E-value=2.4e+02 Score=23.73 Aligned_cols=98 Identities=16% Similarity=0.055 Sum_probs=61.2
Q ss_pred EeccCCcee-EEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--CCceEE
Q 045250 38 KEVGDGNLN-FVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR--TMSLIG 113 (165)
Q Consensus 38 ~~l~~Gn~N-~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--e~~~~v 113 (165)
+.+..|-+- -|||+.-..+ .+.+|++..+... -...|++-|+-++.. .--+|.|..+.. +.--++
T Consensus 24 ~~v~~geS~~~v~rl~a~~r~g~~~k~~~~~~~a----------~L~~Ea~RlrWla~~-~l~~P~V~~~~~~~~~~wLl 92 (266)
T COG3231 24 RRVTEGESGAGVFRLFADSRPGLYLKIASSGPAA----------ELEGEAARLRWLAGQ-GLGCPRVLGLEDDADQAWLL 92 (266)
T ss_pred ceeeccCCCCeEEEEeccCCCceEEEEecCcchh----------hhhhHHHHHHHhccc-CCCCCceEeeccCcchhHHh
Confidence 344444433 5899887766 8999999865432 233466666666653 334677777654 667788
Q ss_pred EecCCC-CchHHHHHHHcCCCCH-HHHHHHHHHHHHHHhc
Q 045250 114 MRYLEP-PHIILRKGLIAGIKYP-LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 114 MEdl~~-~~~~lr~~l~~g~~~~-~~a~~iG~~La~~h~~ 151 (165)
|+-++. +....+. ...| .....+++.|-.+|..
T Consensus 93 ~salpG~~~s~~~~-----~~~p~r~v~~la~aLR~LH~l 127 (266)
T COG3231 93 MSALPGEDASHPRY-----ALDPKRAVPLLAEALRRLHEL 127 (266)
T ss_pred hhhcCCCcccchhh-----cCCHHHHHHHHHHHHHHHhcC
Confidence 998884 2222222 2333 5677778888888863
No 425
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=38.40 E-value=41 Score=32.01 Aligned_cols=90 Identities=18% Similarity=0.158 Sum_probs=58.7
Q ss_pred eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHH--HHHhhc--cC---C--CCCceEEEEc
Q 045250 36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALA--LKEHGK--LC---P--DHVPEVYHFD 106 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~--L~~~~~--~~---p--~~vP~v~~~D 106 (165)
+++-+|-|-=-.||+..+.+.+|-||-- |...|.++ |+.+.- ++ . ...|
T Consensus 128 ELeWlGSGaQGAVF~Grl~netVAVKKV----------------~elkETdIKHLRkLkH~NII~FkGVCtqsP------ 185 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLHNETVAVKKV----------------RELKETDIKHLRKLKHPNIITFKGVCTQSP------ 185 (904)
T ss_pred hhhhhccCcccceeeeeccCceehhHHH----------------hhhhhhhHHHHHhccCcceeeEeeeecCCc------
Confidence 6677888888889988888778877732 33344443 444432 11 0 1223
Q ss_pred CCCceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250 107 RTMSLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~ 151 (165)
-+.|||||++ +..|...|.+|+.. | .....|+.-|--+|.+
T Consensus 186 --cyCIiMEfCa--~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h 231 (904)
T KOG4721|consen 186 --CYCIIMEFCA--QGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH 231 (904)
T ss_pred --eeEEeeeccc--cccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh
Confidence 2469999999 56888888888753 3 4566777777777764
No 426
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=38.07 E-value=2.1e+02 Score=25.64 Aligned_cols=70 Identities=20% Similarity=0.104 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHhhccCCCCCc-eEEE---EcCCCce-EEEecCCCCchHHHHHHHcCCC--CH-----HHHHHHHHHH
Q 045250 78 KERAYFEALALKEHGKLCPDHVP-EVYH---FDRTMSL-IGMRYLEPPHIILRKGLIAGIK--YP-----LLAEHMSEFM 145 (165)
Q Consensus 78 ~~R~~~E~~~L~~~~~~~p~~vP-~v~~---~D~e~~~-~vMEdl~~~~~~lr~~l~~g~~--~~-----~~a~~iG~~L 145 (165)
.+=+++|.++|+.+.+-.|...= .+.. ||--+++ +|.|-++ ..++++|-++.. || .+|.||-..+
T Consensus 129 reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG---~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv 205 (415)
T KOG0671|consen 129 REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLG---LSTFDFLKENNYIPFPIDHIRHMGYQLLESV 205 (415)
T ss_pred hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccC---hhHHHHhccCCccccchHHHHHHHHHHHHHH
Confidence 35578899999999887776433 3334 6888887 5666665 578899988663 23 5677777778
Q ss_pred HHHHh
Q 045250 146 AKTLF 150 (165)
Q Consensus 146 a~~h~ 150 (165)
+-+|.
T Consensus 206 ~fLh~ 210 (415)
T KOG0671|consen 206 AFLHD 210 (415)
T ss_pred HHHHh
Confidence 87774
No 427
>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]
Probab=35.49 E-value=32 Score=28.64 Aligned_cols=102 Identities=14% Similarity=-0.030 Sum_probs=60.9
Q ss_pred cceeEecc---CCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCc
Q 045250 34 DLTIKEVG---DGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMS 110 (165)
Q Consensus 34 ~~~v~~l~---~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~ 110 (165)
.|++++-+ +-.+.-+|-|.-.+||-|+|--+++.... -.+.=+..|+-+.. .-+-+++ +.+.+
T Consensus 11 rW~l~p~g~p~~T~ssrllpv~~~ggsa~~~amlk~~~~~---------eerrG~~ll~ww~G---~Gaarvl--a~d~~ 76 (274)
T COG3570 11 RWNLEPAGEPADTHSSRLLPVRRRGGSAIAKAMLKKADLE---------EERRGADLLAWWDG---IGAARVL--AQDDN 76 (274)
T ss_pred hcccCCCCCcccccccceEEEEecCchhHHHHHhhhccch---------Hhhccchhhhhhhc---CCcchhh--ccCcc
Confidence 34444433 33445677787777787777766655432 22223345544443 2345566 55789
Q ss_pred eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ 151 (165)
++.||+.+ ....+-....+|. +....+-..+.++++|..
T Consensus 77 alLlEra~-~~rsl~~l~~~G~-Dd~aTrIac~a~~rlh~P 115 (274)
T COG3570 77 ALLLERAG-GERSLDVLVRDGN-DDAATRIACEALARLHAP 115 (274)
T ss_pred HHHHHhcc-ccchHHHHHHhCC-chHHHHHHHHHHHHhhCC
Confidence 99999999 4544444444454 444556668889999986
No 428
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=35.35 E-value=93 Score=23.67 Aligned_cols=47 Identities=13% Similarity=0.266 Sum_probs=31.4
Q ss_pred ceeEEEEEEeCCCeEEEEecCccccc----cCCCCCCChHHHHHHHHHHHHh
Q 045250 44 NLNFVYIVVGTSGSFVIKQALPYVRC----IGESWPMTKERAYFEALALKEH 91 (165)
Q Consensus 44 n~N~v~rV~~~~gsvIvKqa~p~~r~----~~~~~~l~~~R~~~E~~~L~~~ 91 (165)
-+||-|.+.+.+|.|| +|+...++- ..+...-+.++.++|..+|.-+
T Consensus 87 RI~l~Y~L~d~~G~vi-~~g~e~L~Dm~fl~~~~~~~~~d~l~YEk~mL~dW 137 (141)
T PF11454_consen 87 RIELSYTLTDADGKVI-KQGEEKLKDMGFLMRPRRRRSSDPLRYEKAMLDDW 137 (141)
T ss_pred cEEEEEEEECCCCcEE-EecceEEecchhhcCCCCCCCCcccHHHHHHHHHH
Confidence 3667777877776665 778877652 1234455557888999888654
No 429
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=34.88 E-value=3.3e+02 Score=25.13 Aligned_cols=103 Identities=14% Similarity=0.069 Sum_probs=55.2
Q ss_pred ceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE----EcCC--
Q 045250 35 LTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH----FDRT-- 108 (165)
Q Consensus 35 ~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~----~D~e-- 108 (165)
.+++.+++.-+|....+ +.++|+|-=+--- .|....+-..|...|+ --.+||.++. .|.+
T Consensus 168 ~~~r~l~~EQSNtSi~~---g~~~ilKlyRrl~--~G~nPe~E~~r~Lte~---------gf~~vP~llG~v~~~~~~g~ 233 (528)
T TIGR02457 168 PEVRLLSAEQSNSSLVV---GDRVVLKLYRKVE--PGINPEIEMGRYLTAA---------GYANIPPLLGSVERVGGDQA 233 (528)
T ss_pred CceeecCCCcCceEEEE---CCEEEEEEecccC--CCCCcchHHHHHHHhC---------CCccCCcccEEEEEEcCCCC
Confidence 35678888888866444 2389999833211 1333333344444431 1234454443 3433
Q ss_pred C--ceEEEecCCCCch-------HHHHHHHc---------------CCCCHHHHHHHHHHHHHHHhc
Q 045250 109 M--SLIGMRYLEPPHI-------ILRKGLIA---------------GIKYPLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 109 ~--~~~vMEdl~~~~~-------~lr~~l~~---------------g~~~~~~a~~iG~~La~~h~~ 151 (165)
. -.++.+|+++..- .++..+.+ +..+...++.||.-+|.+|..
T Consensus 234 ~~tla~lq~fV~nqgDaW~~tl~~l~r~~e~~~~~~~~~~~~~~~~~~~~~~~a~~LG~rtAemH~a 300 (528)
T TIGR02457 234 PHTLGLLQGYVQNQGDAWRWTLGHLKRYIEEQLSPCANGALAPTLIGAGYLEFAGLLGRRLAELHLA 300 (528)
T ss_pred EEeeehHhhhhCCCccHHHHHHHHHHHHHHhhhccccccccChhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 2 2344588885221 23433321 122456799999999999964
No 430
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=31.46 E-value=3.1e+02 Score=25.55 Aligned_cols=105 Identities=23% Similarity=0.290 Sum_probs=64.8
Q ss_pred eeEeccCCceeEEEEEEeC-CCeEEEEecCccccccC--CCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEE--cCCC
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SGSFVIKQALPYVRCIG--ESWPMTKERAYFEALALKEHGKLCPDHVP-EVYHF--DRTM 109 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~gsvIvKqa~p~~r~~~--~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~--D~e~ 109 (165)
.++.||.|.-.-||+..+. +|.+| |+-++|... ++++. =+..|..+|+.+.- |..+. +-+-. +.-.
T Consensus 121 ki~kIGeGTyg~VYkAr~~~tgkiv---ALKKvr~d~~~~~~~~---t~~REI~ILr~l~H--pNIikL~eivt~~~~~s 192 (560)
T KOG0600|consen 121 KIEKIGEGTYGQVYKARDLETGKIV---ALKKVRFDNEKEGFPI---TAIREIKILRRLDH--PNIIKLEEIVTSKLSGS 192 (560)
T ss_pred HHHHhcCcchhheeEeeecccCcEE---EEEEeecccCCCcchH---HHHHHHHHHHhcCC--CcccceeeEEEecCCce
Confidence 6788999999999999876 56443 444555432 34444 45679999998865 22110 11122 3356
Q ss_pred ceEEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~ 151 (165)
.-+|+||.. | +|-..+..+ ..| ..+..||-.-|.-.|..
T Consensus 193 iYlVFeYMd--h-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~ 237 (560)
T KOG0600|consen 193 IYLVFEYMD--H-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR 237 (560)
T ss_pred EEEEEeccc--c-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc
Confidence 678999997 4 555555553 333 24566776666666654
No 431
>cd03527 RuBisCO_small Ribulose bisphosphate carboxylase/oxygenase (Rubisco), small subunit. Rubisco is a bifunctional enzyme catalyzes the initial steps of two opposing metabolic pathways: photosynthetic carbon fixation and the competing process of photorespiration. Rubisco Form I, present in plants and green algae, is composed of eight large and eight small subunits. The nearly identical small subunits are encoded by a family of nuclear genes. After translation, the small subunits are translocated across the chloroplast membrane, where an N-terminal signal peptide is cleaved off. While the large subunits contain the catalytic activities, it has been shown that the small subunits are important for catalysis by enhancing the catalytic rate through inducing conformational changes in the large subunits.
Probab=29.56 E-value=54 Score=23.46 Aligned_cols=46 Identities=24% Similarity=0.276 Sum_probs=35.0
Q ss_pred CCCCChHHHHHHHHHHHHhhcc---CCCCCceEEEEcCCCceEEEecCC
Q 045250 73 SWPMTKERAYFEALALKEHGKL---CPDHVPEVYHFDRTMSLIGMRYLE 118 (165)
Q Consensus 73 ~~~l~~~R~~~E~~~L~~~~~~---~p~~vP~v~~~D~e~~~~vMEdl~ 118 (165)
.|.+|.=-+.-+.++|..+.+. -|+.--+++.||+-....+||.+-
T Consensus 48 mwklP~f~~~d~~~Vl~ei~~C~~~~p~~YVRliG~D~~~q~~~~~fIv 96 (99)
T cd03527 48 MWKLPMFGCTDPAQVLREIEACRKAYPDHYVRVVGFDNYKQSQCMSFIV 96 (99)
T ss_pred eccCCCCCCCCHHHHHHHHHHHHHHCCCCeEEEEEEeCCccEEEEEEEe
Confidence 4567775556677777777653 477888999999999999999763
No 432
>PRK01379 cyaY frataxin-like protein; Provisional
Probab=28.73 E-value=69 Score=23.02 Aligned_cols=51 Identities=20% Similarity=0.307 Sum_probs=28.2
Q ss_pred CCCCCccccCHhh---HHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCe-EEEEecC
Q 045250 1 MAFTEFRPLDDKS---LLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGS-FVIKQAL 64 (165)
Q Consensus 1 ~~~~~~~~l~~~~---v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gs-vIvKqa~ 64 (165)
|+-++|..+..+. +.++|.+.. ....+.++ .+||+++.. ..+|+ ||=||+.
T Consensus 1 M~~~ef~~lad~~L~~ie~~ie~~~--------~d~d~D~e-~~~gVLtl~----~~~gt~VINkQ~p 55 (103)
T PRK01379 1 MNNSEFSKIAETTIAYIADKIEEQD--------KEASIDVD-LQGDILNLD----TDKGIYVINKQSA 55 (103)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcC--------CCcceeee-ccCCEEEEE----eCCcEEEEeCCCh
Confidence 5555666665554 344443211 22345555 689998865 35566 4447765
No 433
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=28.59 E-value=1e+02 Score=26.06 Aligned_cols=47 Identities=13% Similarity=0.201 Sum_probs=28.7
Q ss_pred EEEEcCCCceEEEecCCCCchHHHHHHHcC--CCC-H----HHHHHHHHHHHHHHh
Q 045250 102 VYHFDRTMSLIGMRYLEPPHIILRKGLIAG--IKY-P----LLAEHMSEFMAKTLF 150 (165)
Q Consensus 102 v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g--~~~-~----~~a~~iG~~La~~h~ 150 (165)
-|++|...-.+++||.+ ++.. ...|.+| ..+ . ....+++.+|.-.|.
T Consensus 89 ~~fhd~~riyLilEya~-~gel-~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~ 142 (281)
T KOG0580|consen 89 GYFHDSKRIYLILEYAP-RGEL-YKDLQEGRMKRFDEQRAATYIKQLANALLYCHL 142 (281)
T ss_pred hheeccceeEEEEEecC-CchH-HHHHHhcccccccccchhHHHHHHHHHHHHhcc
Confidence 37889999999999999 5544 4445532 222 2 344455555554443
No 434
>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function.
Probab=28.55 E-value=2.5e+02 Score=24.66 Aligned_cols=106 Identities=14% Similarity=0.122 Sum_probs=60.8
Q ss_pred CceeEEEEEEeCCC---e--EEEEecCccc-----cccCCCC---CCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 045250 43 GNLNFVYIVVGTSG---S--FVIKQALPYV-----RCIGESW---PMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM 109 (165)
Q Consensus 43 Gn~N~v~rV~~~~g---s--vIvKqa~p~~-----r~~~~~~---~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~ 109 (165)
|.-.|+..+...+. . +=||||.+=+ ....|.| .-.-+|...=++.|+......=+.+ .++ ..
T Consensus 228 G~~ry~vLl~g~~~~~d~liLqvKeA~~s~~~~~~~~~~p~~~~~~~~g~RVV~~Qr~lq~~sD~~LG~~----~~~-g~ 302 (385)
T PF10009_consen 228 GTRRYYVLLEGKGDGDDPLILQVKEARPSVLEPYVPATQPAWSPYPHEGQRVVAGQRALQAASDPFLGWV----TID-GR 302 (385)
T ss_pred chhheeeEEecCCCCCCceEEEEeccccccchhhhhhhcccCCCCCCcHHHHHHHHHHHhhcCCcccCce----eeC-Cc
Confidence 44457777776532 2 5689998543 2222334 5667787777778877766311111 111 24
Q ss_pred ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250 110 SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL 154 (165)
Q Consensus 110 ~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd 154 (165)
..+|-|.-+- -..+.-.-++...+...|+.+|..||+.|..+.+
T Consensus 303 ~f~VRql~p~-k~~~d~~~l~~~~~~~~a~~~g~~lA~aHars~~ 346 (385)
T PF10009_consen 303 DFYVRQLRPM-KGSVDLEDLDPEELQDYARLCGRALARAHARSDD 346 (385)
T ss_pred eEEEEECCCc-CCCcChhhCCHHHHHHHHHHHHHHHHHHHhcCCh
Confidence 5566665542 1122211123445678999999999999999653
No 435
>PF09162 Tap-RNA_bind: Tap, RNA-binding; InterPro: IPR015245 This domain adopts a structure consisting of an alpha+beta sandwich with an antiparallel beta-sheet, arranged in a 2(beta-alpha-beta) motif. It is mainly found in mRNA export factors, which mediate the sequence nonspecific nuclear export of cellular mRNAs as well as the sequence-specific export of retroviral mRNAs bearing the constitutive transport element []. ; GO: 0003723 RNA binding, 0006406 mRNA export from nucleus, 0005634 nucleus, 0005737 cytoplasm; PDB: 1FT8_A 1KOH_C 1KOO_C 3RW6_B 3RW7_C 1FO1_A.
Probab=28.07 E-value=59 Score=22.77 Aligned_cols=32 Identities=13% Similarity=0.279 Sum_probs=23.4
Q ss_pred HHHHhhccCC-CCCceEEEEcCCCceEEEecCC
Q 045250 87 ALKEHGKLCP-DHVPEVYHFDRTMSLIGMRYLE 118 (165)
Q Consensus 87 ~L~~~~~~~p-~~vP~v~~~D~e~~~~vMEdl~ 118 (165)
.|+.++.+|| .++|.-+||+.....|-.||..
T Consensus 23 Ll~~iq~~c~v~F~Pv~fh~~~~~a~FfV~D~~ 55 (88)
T PF09162_consen 23 LLNSIQSHCSVPFTPVDFHYEKNRAQFFVEDAS 55 (88)
T ss_dssp HHHHHHHHSSS----EEEEEETTEEEEEESSHH
T ss_pred HHHHHHHHCCCCeeeeeeeeeCCEEEEEeCCHH
Confidence 4777788998 6899999999998888888654
No 436
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=28.06 E-value=5.8e+02 Score=24.95 Aligned_cols=103 Identities=19% Similarity=0.174 Sum_probs=70.7
Q ss_pred EeccCCceeEEEEEEe--C-CC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC-c
Q 045250 38 KEVGDGNLNFVYIVVG--T-SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM-S 110 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~--~-~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~-~ 110 (165)
+-||+|..--||...- . .| .|-||--. ...-+-+.+-...|+-+|+.+.- | ++-++++.=.++ -
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK------~d~t~d~tekflqEa~iMrnfdH--p-hIikLIGv~~e~P~ 465 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCK------TDCTPDDTEKFLQEASIMRNFDH--P-HIIKLIGVCVEQPM 465 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhc------cCCChhhHHHHHHHHHHHHhCCC--c-chhheeeeeeccce
Confidence 3478999999998753 2 34 56666543 23345667888899999988754 2 233444443333 3
Q ss_pred eEEEecCCCCchHHHHHHHcCCCC------HHHHHHHHHHHHHHHhc
Q 045250 111 LIGMRYLEPPHIILRKGLIAGIKY------PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 111 ~~vMEdl~~~~~~lr~~l~~g~~~------~~~a~~iG~~La~~h~~ 151 (165)
-+|||-.+ ..-||..|...+.. --.+-||.+.||-+|..
T Consensus 466 WivmEL~~--~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk 510 (974)
T KOG4257|consen 466 WIVMELAP--LGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK 510 (974)
T ss_pred eEEEeccc--chhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh
Confidence 58899887 67999999987742 35688999999988753
No 437
>PRK10963 hypothetical protein; Provisional
Probab=28.04 E-value=36 Score=27.45 Aligned_cols=18 Identities=28% Similarity=0.724 Sum_probs=15.7
Q ss_pred ccCHhhHHHHHHhCCCcc
Q 045250 8 PLDDKSLLEYIKATPSLS 25 (165)
Q Consensus 8 ~l~~~~v~~Yl~~~~~~~ 25 (165)
.||+++|++||+++|-|+
T Consensus 2 ~l~~~~V~~yL~~~PdFf 19 (223)
T PRK10963 2 ELDDRAVVDYLLQNPDFF 19 (223)
T ss_pred CCCHHHHHHHHHHCchHH
Confidence 589999999999998664
No 438
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=26.66 E-value=3e+02 Score=24.10 Aligned_cols=105 Identities=19% Similarity=0.151 Sum_probs=62.6
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEe----cCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQ----ALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRT 108 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKq----a~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e 108 (165)
.+.-+|-|..--|-.|... +| -.-+|. -.-.++- .+-...|..+|+... +|-.+=-. -+.|..
T Consensus 48 ~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQ--------veH~~nEk~vL~~v~--~PFlv~l~~t~~d~~ 117 (355)
T KOG0616|consen 48 RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQ--------VEHTHNEKRVLKAVS--HPFLVKLYGTFKDNS 117 (355)
T ss_pred heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHH--------HHHHhhHHHHHhhcc--CceeEEEEEeeccCC
Confidence 4667888888878777764 33 233332 2222221 256677888888776 34333222 245778
Q ss_pred CceEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT 152 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t 152 (165)
+-.+||||++ ++ -|-..|.+-..|+ -.|++|-.+|--+|...
T Consensus 118 ~lymvmeyv~-GG-ElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~ 164 (355)
T KOG0616|consen 118 NLYMVMEYVP-GG-ELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLD 164 (355)
T ss_pred eEEEEEeccC-Cc-cHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcC
Confidence 8889999999 33 4545555533332 25677777777777543
No 439
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=26.53 E-value=3.3e+02 Score=25.21 Aligned_cols=85 Identities=21% Similarity=0.104 Sum_probs=58.8
Q ss_pred eccCCceeEEEEEEeC----C----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 045250 39 EVGDGNLNFVYIVVGT----S----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRT 108 (165)
Q Consensus 39 ~l~~Gn~N~v~rV~~~----~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e 108 (165)
.+|.|...-|++.... . . .|.||...+.... -..+....|.++|+.++.+ |..+--+ .-....
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~------~~~~~~~~El~~m~~~g~H-~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS------SEKKDLMSELNVLKELGKH-PNIVNLLGACTQDG 375 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCc------HHHHHHHHHHHHHHHhcCC-cchhhheeeeccCC
Confidence 8889999999888743 1 2 6888888766542 3346778889999999886 2211000 001267
Q ss_pred CceEEEecCCCCchHHHHHHHcCC
Q 045250 109 MSLIGMRYLEPPHIILRKGLIAGI 132 (165)
Q Consensus 109 ~~~~vMEdl~~~~~~lr~~l~~g~ 132 (165)
...+|+||+. +.+|+..|.+..
T Consensus 376 ~~~~v~Ey~~--~G~L~~~Lr~~r 397 (609)
T KOG0200|consen 376 PLYVIVEYAE--HGDLLEFLRKKR 397 (609)
T ss_pred ceEEEEEecc--CCcHHHHHHhcc
Confidence 8889999998 568888887766
No 440
>PF04340 DUF484: Protein of unknown function, DUF484; InterPro: IPR007435 This family consists of several proteins of uncharacterised function.; PDB: 3E98_B.
Probab=26.04 E-value=9.9 Score=30.51 Aligned_cols=20 Identities=20% Similarity=0.477 Sum_probs=0.0
Q ss_pred ccccCHhhHHHHHHhCCCcc
Q 045250 6 FRPLDDKSLLEYIKATPSLS 25 (165)
Q Consensus 6 ~~~l~~~~v~~Yl~~~~~~~ 25 (165)
-..|+++.|++||+++|-|+
T Consensus 3 ~~~l~~~~V~~yL~~~PdFf 22 (225)
T PF04340_consen 3 TDALDAEDVAAYLRQHPDFF 22 (225)
T ss_dssp --------------------
T ss_pred cccCCHHHHHHHHHhCcHHH
Confidence 45789999999999998664
No 441
>COG3137 Putative salt-induced outer membrane protein [Cell envelope biogenesis, outer membrane]
Probab=25.58 E-value=2.1e+02 Score=23.82 Aligned_cols=65 Identities=22% Similarity=0.321 Sum_probs=42.1
Q ss_pred CCcceeEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhc-----cCCCCCce
Q 045250 32 FDDLTIKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGK-----LCPDHVPE 101 (165)
Q Consensus 32 ~~~~~v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~-----~~p~~vP~ 101 (165)
+.+.+.++|+-|++++-|.+++. +| +++|=-.--++-. + +.+.=...|.-+|+.... -.|+..|+
T Consensus 175 d~~~e~~pigr~~l~~~wqltdNt~f~~~vs~~~ga~nttlns---e--~al~vain~hfalK~a~~~~~nt~~pE~~~k 249 (262)
T COG3137 175 DDDTETQPIGRGSLDYAWQLTDNTKFTQGVSVFVGAENTTLNS---E--TALNVAINEHFALKVAYNLTYNTEPPESAPK 249 (262)
T ss_pred CCcceeecccccccceeeeeccchhhhcceeEEeccccccccc---h--hhHHHHHHHHHHHHHHhHhhccCCCCCCCCc
Confidence 34589999999999999999987 45 6666555555542 1 222333444445554443 46788877
No 442
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=25.01 E-value=67 Score=27.86 Aligned_cols=101 Identities=14% Similarity=0.076 Sum_probs=57.4
Q ss_pred EeccCCceeEEEEEEeCCC--eEEEEecC-ccccccCCCCCCChHHHHHHHH---HHHHhhccCCCCCceEEEEcCCCce
Q 045250 38 KEVGDGNLNFVYIVVGTSG--SFVIKQAL-PYVRCIGESWPMTKERAYFEAL---ALKEHGKLCPDHVPEVYHFDRTMSL 111 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~~g--svIvKqa~-p~~r~~~~~~~l~~~R~~~E~~---~L~~~~~~~p~~vP~v~~~D~e~~~ 111 (165)
..+|.|-.-.+..+.-... .+++|--. |+... .....|.. .|.-.+.++. +-++-+--.+-++
T Consensus 30 k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~---------~dF~rEfhY~~~Ls~H~hIi~--tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 30 KQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQ---------ADFVREFHYSFFLSPHQHIID--TYEVAFQTSDAYV 98 (378)
T ss_pred HHhcccceeeEEeeeccCCceEEEeeccCcchhhH---------HHHHHHhccceeeccchhhhH--HHHHHhhcCceEE
Confidence 4578898888888876533 56666322 22221 12222322 1222222211 2223344456889
Q ss_pred EEEecCCCCchHHHHHHHcC---CCC-HHHHHHHHHHHHHHHhc
Q 045250 112 IGMRYLEPPHIILRKGLIAG---IKY-PLLAEHMSEFMAKTLFY 151 (165)
Q Consensus 112 ~vMEdl~~~~~~lr~~l~~g---~~~-~~~a~~iG~~La~~h~~ 151 (165)
|+||+.+ ...|+...-.. +.. ..+++++...+.-+|..
T Consensus 99 F~qE~aP--~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsk 140 (378)
T KOG1345|consen 99 FVQEFAP--RGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSK 140 (378)
T ss_pred EeeccCc--cchhhhhcCcccccHHHHHHHHHHHHHHHHHhhcc
Confidence 9999998 66888876552 223 36788888888888753
No 443
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=24.12 E-value=1e+02 Score=27.05 Aligned_cols=105 Identities=15% Similarity=0.175 Sum_probs=63.0
Q ss_pred eeEeccCCceeEEEEEEeC-CC-eEEEEecC-ccccccCCCCCCChHHHHHHHHHHHHhhc--cC---CCCCceEEEEcC
Q 045250 36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQAL-PYVRCIGESWPMTKERAYFEALALKEHGK--LC---PDHVPEVYHFDR 107 (165)
Q Consensus 36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~-p~~r~~~~~~~l~~~R~~~E~~~L~~~~~--~~---p~~vP~v~~~D~ 107 (165)
.++++|.|--+.|....+. +| +|.||--. |+-. ..+..|+..|-..|+.+.- +. -...|... |.
T Consensus 26 ~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~------~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~--~~ 97 (359)
T KOG0660|consen 26 LIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFEN------QIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR--DK 97 (359)
T ss_pred ccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhc------hHHHHHHHHHHHHHHHhcCCCcceEEeecccccc--cc
Confidence 4899999999999887665 55 77776554 3332 4778999999999999873 11 11233111 11
Q ss_pred -CCceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250 108 -TMSLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY 151 (165)
Q Consensus 108 -e~~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~ 151 (165)
..--+|+|..+ ..|-+.+..++.. . -+--||=+.|--+|.+
T Consensus 98 f~DvYiV~elMe---tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA 144 (359)
T KOG0660|consen 98 FNDVYLVFELME---TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA 144 (359)
T ss_pred cceeEEehhHHh---hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc
Confidence 22335666664 4676766666632 1 2333444444445544
No 444
>PF00101 RuBisCO_small: Ribulose bisphosphate carboxylase, small chain; InterPro: IPR000894 RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) is a bifunctional enzyme that catalyses both the carboxylation and oxygenation of ribulose-1,5-bisphosphate (RuBP) [], thus fixing carbon dioxide as the first step of the Calvin cycle. RuBisCO is the major protein in the stroma of chloroplasts, and in higher plants exists as a complex of 8 large and 8 small subunits. The function of the small subunit is unknown []. While the large subunit is coded for by a single gene, the small subunit is coded for by several different genes, which are distributed in a tissue specific manner. They are transcriptionally regulated by light receptor phytochrome [], which results in RuBisCO being more abundant during the day when it is required. The RuBisCo small subunit consists of a central four-stranded beta-sheet, with two helices packed against it [].; PDB: 1BWV_W 1IWA_P 3AXM_X 1WDD_S 3AXK_T 1IR2_K 1RBL_N 1UZH_J 1RSC_P 1UW9_C ....
Probab=23.12 E-value=46 Score=23.78 Aligned_cols=44 Identities=16% Similarity=0.182 Sum_probs=33.5
Q ss_pred CCCChHHHHHHHHHHHHhhc---cCCCCCceEEEEcCCCceEEEecC
Q 045250 74 WPMTKERAYFEALALKEHGK---LCPDHVPEVYHFDRTMSLIGMRYL 117 (165)
Q Consensus 74 ~~l~~~R~~~E~~~L~~~~~---~~p~~vP~v~~~D~e~~~~vMEdl 117 (165)
|.+|.=-+..+.++|..+.+ --|+.--+++.||+..-..+||.+
T Consensus 48 W~~p~~~~~~~~~Vl~el~~c~~~~p~~yVRlig~D~~~q~r~~~~i 94 (99)
T PF00101_consen 48 WKLPMFGCTDPAQVLAELEACLAEHPGEYVRLIGFDNKRQRRVLEFI 94 (99)
T ss_dssp ESSEBTTBSSHHHHHHHHHHHHHHSTTSEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCcCCCCHHHHHHHHHHHHHhCCCceEEEEEEcCcccEEEEEEE
Confidence 45666666667777666655 247888899999999999999976
No 445
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=22.89 E-value=1.4e+02 Score=26.78 Aligned_cols=39 Identities=13% Similarity=0.085 Sum_probs=25.8
Q ss_pred hHHHHHHHHHH--HHhhccCCCCCceEEEEcCCCceEEEecCCC
Q 045250 78 KERAYFEALAL--KEHGKLCPDHVPEVYHFDRTMSLIGMRYLEP 119 (165)
Q Consensus 78 ~~R~~~E~~~L--~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~ 119 (165)
.-|++.|.++. .+.+++ +-.+|.+. --..+++||.++|+
T Consensus 327 i~~mWAEkEmhNL~RMq~~-GlpcP~vV--~lkkhvLVMsFiGd 367 (531)
T KOG2269|consen 327 ILKMWAEKEMHNLSRMQKH-GLPCPQVV--KLKKHVLVMSFIGD 367 (531)
T ss_pred HHHHHHHHHHHHHHHHHhc-CCCCCcee--eeecceEEEEeecC
Confidence 56788888863 344443 33455554 23789999999996
No 446
>TIGR02383 Hfq RNA chaperone Hfq. This model represents the RNA-binding pleiotropic regulator Hfq, a small, Sm-like protein of bacteria. It helps pair regulatory noncoding RNAs with complementary mRNA target regions. It enhances the elongation of poly(A) tails on mRNA. It appears also to protect RNase E recognition sites (A/U-rich sequences with adjacent stem-loop structures) from cleavage. Being pleiotropic, it differs in some of its activities in different species. Hfq binds the non-coding regulatory RNA DsrA (see Rfam RF00014) in the few species known to have it: Escherichia coli, Shigella flexneri, Salmonella spp. In Azorhizobium caulinodans, an hfq mutant is unable to express nifA, and Hfq is called NrfA, for nif regulatory factor (see PubMed:8197116). The name hfq reflects phenomenology as a host factor for phage Q-beta RNA replication.
Probab=22.72 E-value=1.1e+02 Score=19.92 Aligned_cols=26 Identities=15% Similarity=0.308 Sum_probs=18.5
Q ss_pred CCceeEEEEEEeCCC-eEEEEecCccc
Q 045250 42 DGNLNFVYIVVGTSG-SFVIKQALPYV 67 (165)
Q Consensus 42 ~Gn~N~v~rV~~~~g-svIvKqa~p~~ 67 (165)
-|.=||+-.+....+ .+|.|||...+
T Consensus 33 ~~fD~ftVll~~~g~qqLIYKhAISTI 59 (61)
T TIGR02383 33 ESFDNFTVLLESQGKQQLIYKHAISTI 59 (61)
T ss_pred EEEeeeEEEEEECCcEEEEEEEEEEEE
Confidence 356678877765544 79999997654
No 447
>COG2973 TrpR Trp operon repressor [Transcription]
Probab=22.34 E-value=30 Score=24.93 Aligned_cols=42 Identities=14% Similarity=0.072 Sum_probs=34.0
Q ss_pred EecCCCCchHHHHHHHcCCCC-HHHHHHHHHHHHHHHhcccccc
Q 045250 114 MRYLEPPHIILRKGLIAGIKY-PLLAEHMSEFMAKTLFYTSLLY 156 (165)
Q Consensus 114 MEdl~~~~~~lr~~l~~g~~~-~~~a~~iG~~La~~h~~tsd~~ 156 (165)
+|+|+ .-...-.+|++|+.. ..++..+|..+|.+-+.+-.+-
T Consensus 43 Real~-~Rv~Iv~eLL~ge~sQREi~~~LgvsiAtITRGSN~LK 85 (103)
T COG2973 43 REALG-TRVRIVEELLRGELSQREIAQKLGVSIATITRGSNSLK 85 (103)
T ss_pred HHHHH-HHHHHHHHHHhccccHHHHHHHhCcchhhhccchhhhc
Confidence 68888 455677888899987 4899999999999988776554
No 448
>KOG1693 consensus emp24/gp25L/p24 family of membrane trafficking proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.15 E-value=1.3e+02 Score=24.49 Aligned_cols=31 Identities=10% Similarity=0.265 Sum_probs=26.5
Q ss_pred cceeEeccCCceeEEEEEEeCCCeEEEEecC
Q 045250 34 DLTIKEVGDGNLNFVYIVVGTSGSFVIKQAL 64 (165)
Q Consensus 34 ~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~ 64 (165)
.++-+.+.||+.-.=|.+..++|++|++-..
T Consensus 48 ~~~fqV~tGG~fDVD~~I~aPdgkvI~~~~k 78 (209)
T KOG1693|consen 48 SFEFQVQTGGHFDVDYDIEAPDGKVIYSEKK 78 (209)
T ss_pred EEEEEEEeCCceeeEEEEECCCCCEEeeccc
Confidence 3577889999999999999999999987654
No 449
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=21.60 E-value=3e+02 Score=26.84 Aligned_cols=71 Identities=18% Similarity=0.213 Sum_probs=47.7
Q ss_pred HHHHHH--HHHHHHhhccCCCCCceEEE--EcCCCceEEEecCCCCchHHHHHHHcCC----------C---------CH
Q 045250 79 ERAYFE--ALALKEHGKLCPDHVPEVYH--FDRTMSLIGMRYLEPPHIILRKGLIAGI----------K---------YP 135 (165)
Q Consensus 79 ~R~~~E--~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vMEdl~~~~~~lr~~l~~g~----------~---------~~ 135 (165)
.|+-++ ++.|. ++--.++-++|. ...+-..+|+||.. +.+|+++|.... . +-
T Consensus 532 ~~~dF~REaeLla---~l~H~nIVrLlGVC~~~~P~~MvFEYm~--~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L 606 (774)
T KOG1026|consen 532 ARQDFRREAELLA---ELQHPNIVRLLGVCREGDPLCMVFEYMD--HGDLHEFLRARSPKADKLASGQDTPPPLSTSQFL 606 (774)
T ss_pred HHHHHHHHHHHHH---hccCCCeEEEEEEEccCCeeEEEEEecc--cccHHHHHHhhCCccccccCCCCCCCCCCHHHHH
Confidence 555544 44454 444456667765 36678899999997 789999998732 1 12
Q ss_pred HHHHHHH---HHHHHHHhcccc
Q 045250 136 LLAEHMS---EFMAKTLFYTSL 154 (165)
Q Consensus 136 ~~a~~iG---~~La~~h~~tsd 154 (165)
++|.||+ .+|++-||.--|
T Consensus 607 ~iA~QIAaGM~YLs~~~FVHRD 628 (774)
T KOG1026|consen 607 HIATQIAAGMEYLSSHHFVHRD 628 (774)
T ss_pred HHHHHHHHHHHHHHhCcccccc
Confidence 5788885 577888876533
No 450
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=21.16 E-value=60 Score=28.19 Aligned_cols=51 Identities=20% Similarity=0.300 Sum_probs=38.7
Q ss_pred EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhc
Q 045250 38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGK 93 (165)
Q Consensus 38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~ 93 (165)
++||=|-...||-|+++ +| .+-+|--+.+.-. ..+..|...|..+|+.+.-
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~-----L~s~krvFre~kmLcfFkH 111 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQN-----LASCKRVFREIKMLSSFRH 111 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHH-----HHHHHHHHHHHHHHHhhcc
Confidence 57999999999999998 55 6777766655421 2556899999998887743
No 451
>cd01716 Hfq Hfq, an abundant, ubiquitous RNA-binding protein, functions as a pleiotrophic regulator of RNA metabolism in prokaryotes, required for transcription of some transcripts and degradation of others. Hfq binds small RNA molecules called riboregulators that modulate the stability or translation efficiency of RNA transcripts. Hfq binds preferentially to unstructured A/U-rich RNA sequences and is similar to the eukaryotic Sm proteins in both sequence and structure. Hfq forms a homo-hexameric ring similar to the heptameric ring of the Sm proteins.
Probab=21.09 E-value=1.3e+02 Score=19.67 Aligned_cols=27 Identities=19% Similarity=0.298 Sum_probs=20.0
Q ss_pred CCceeEEEEEEeCCC-eEEEEecCcccc
Q 045250 42 DGNLNFVYIVVGTSG-SFVIKQALPYVR 68 (165)
Q Consensus 42 ~Gn~N~v~rV~~~~g-svIvKqa~p~~r 68 (165)
-|.=||+-.+....+ .+|.|||...+.
T Consensus 29 ~~fD~ftVll~~~g~qqLIYKhAISTI~ 56 (61)
T cd01716 29 ESFDNFTVLLESDGKQQLVYKHAISTIT 56 (61)
T ss_pred EEEcceEEEEEECCcEEEEEeeeeEEEe
Confidence 356678877776544 899999997764
No 452
>cd00307 RuBisCO_small_like Ribulose bisphosphate carboxylase/oxygenase (Rubisco), small subunit and related proteins. Rubisco is a bifunctional enzyme catalyzes the initial steps of two opposing metabolic pathways: photosynthetic carbon fixation and the competing process of photorespiration. Rubisco Form I, present in plants and green algae, is composed of eight large and eight small subunits. The nearly identical small subunits are encoded by a family of nuclear genes. After translation, the small subunits are translocated across the chloroplast membrane, where an N-terminal signal peptide is cleaved off. While the large subunits contain the catalytic activities, it has been shown that the small subunits are important for catalysis by enhancing the catalytic rate through inducing conformational changes in the large subunits. This superfamily also contains specific proteins from cyanobacteria. CcmM plays a role in a CO2 concentrating mechanism, which cyanobacteria need to to overcome t
Probab=20.53 E-value=1.8e+02 Score=20.14 Aligned_cols=46 Identities=13% Similarity=-0.063 Sum_probs=33.1
Q ss_pred CCCCChHHH--HHHHHHHHHhhcc---CCCCCceEEEEcCCCceEEEecCC
Q 045250 73 SWPMTKERA--YFEALALKEHGKL---CPDHVPEVYHFDRTMSLIGMRYLE 118 (165)
Q Consensus 73 ~~~l~~~R~--~~E~~~L~~~~~~---~p~~vP~v~~~D~e~~~~vMEdl~ 118 (165)
.|.+|.--+ ..+.++|..+.+. -|+.--+++.||+..-..+||++-
T Consensus 31 ~w~lp~f~~~~~~~~~Vl~el~~c~~~~p~~YVRlig~D~~~q~~~~~fIv 81 (84)
T cd00307 31 SSWQSCGPIEGRSEAQVLAALEACLAEHPGEYVRLIGIDPKAKRRVLEIII 81 (84)
T ss_pred hhcCCCCCCCCCCHHHHHHHHHHHHHHCCCCeEEEEEEeCCccEEEEEEEe
Confidence 355554334 5567777666553 488888999999999999999763
Done!