BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045253
MAAINEDKTNQARAMWLTCLASAYRTAVACTIVGSITFYGPSSRRGQVTFPAFSYVTVIL
IVTDATLGDTALDRLTTGTTALAVAIAAFFVAFPEGTHLVAKRIALGQIVLTYVMGFVNG
EHSGAVMLPVRVAASTAIGVLACVLALLLPYPRLACYEVKWNCKQLADNASERLRLYVKA
LCAEDKSTALASISLAKSLTKSGTKHIQNIKRYQENMKWEIPFKFLGSNYVKPVKKFQYL
ELPLRGMEMAVTSATSFPMQTFDGLPRVLEEHTCLTIKKVKSYQILCNSMTVPESNEEYS
LKNFQTIPTISQNLPFFFFLFCMKLLNYRTPKTDGSTNSCEEHVLSFKEACTSRACKVKS
KRFMPAFQCSFSLGLAVLFGLLFSKPNGIWSGLSAAISFATAREATFKRTVYGVLGCFLF
EKLLPIRFLFLFPWFIFTSFLRHGRMYGQGGGISAVIGAVLILGRKSFGPPEEFAIARIV
ETFIGLTCTIIGELLFQSTRASTLAKSQLSKRTFIREADVEPNFGFLPFHSACYSKLLVS
LVKMVHLLHFCSYSIGFLEQESQKIDKASWKEDVQKLDGDVKLVKEMACSSIKCFNDAIT
TIKSLAILEKKLGRKTFNVFRDIECGNSPIGLCVPNGILDSDENKEKIVINTYLQHLQEL
DDKIKKVDVEEFKNQIVLSLSALGYCMRSLIIET

High Scoring Gene Products

Symbol, full name Information P value
AT2G28780 protein from Arabidopsis thaliana 7.8e-152

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045253
        (694 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2053200 - symbol:AT2G28780 species:3702 "Arabi...  1014  7.8e-152  3
TAIR|locus:2074889 - symbol:AT3G09450 species:3702 "Arabi...   667  9.8e-90   3


>TAIR|locus:2053200 [details] [associations]
            symbol:AT2G28780 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009734 "auxin mediated
            signaling pathway" evidence=RCA] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:BT004090 EMBL:BT008605
            IPI:IPI00533863 RefSeq:NP_180444.2 UniGene:At.27789
            ProteinModelPortal:Q84W96 PaxDb:Q84W96 PRIDE:Q84W96
            EnsemblPlants:AT2G28780.1 GeneID:817427 KEGG:ath:AT2G28780
            TAIR:At2g28780 eggNOG:NOG289418 HOGENOM:HOG000239132
            InParanoid:Q84W96 OMA:CSIMVEL PhylomeDB:Q84W96
            ProtClustDB:CLSN2918120 Genevestigator:Q84W96 Uniprot:Q84W96
        Length = 796

 Score = 1014 (362.0 bits), Expect = 7.8e-152, Sum P(3) = 7.8e-152
 Identities = 226/439 (51%), Positives = 291/439 (66%)

Query:    97 THLVAKRIALGQIVLTYVMGFVNGEHSGAVMLPVRVAASTAIGVLACVLALLLPYPRLAC 156
             THLVAKRIALGQIVL YV+G++ G  +  VM P++VAASTA+GV+ACVLALL+P PRLA 
Sbjct:   118 THLVAKRIALGQIVLIYVIGYIKGAKTDPVMHPLQVAASTALGVVACVLALLVPLPRLAT 177

Query:   157 YEVKWNCKQLADNASERLRLYVKALCAEDKSTALASISLAKSLTKSGTKHIQNIKRYQEN 216
              EVK +CK+L  N + R++LY+KA C++D  +A AS+S A+ L +S +K  Q +KRYQ +
Sbjct:   178 CEVKQSCKELGQNVTTRVKLYMKAFCSDDSMSATASVSQARVLARSSSKLYQTLKRYQPS 237

Query:   217 MKWE-IPFKFLGSNYVKPVK--KFQYLELPLRGMEMAVTSATSFPMQTFDGLPRV----L 269
             M WE +PFK      V   K  K Q +E+ LRGMEM V S +  P     G  +     +
Sbjct:   238 MTWERLPFKIWRWQNVNDNKGEKLQSMEIALRGMEMVVASKSPIPSSLLAGEVKEDLKNI 297

Query:   270 EEHTCLTIKKVKSYQILCNSMTVPES---NEEYSLKNFQTIPTISQNLPFFFFLFCMKLL 326
             +E   L+IK+V +      S+T PES   N +  L+  Q IP   Q+LPF+FFLFC++LL
Sbjct:   298 QERVILSIKRVNNSSQ--PSVT-PESDPKNPDECLQTLQEIPGTPQDLPFYFFLFCIRLL 354

Query:   327 NYRTPKTDGSTNSCEEHVLSFKEACTSRACKVKSKRFMPAFQCSFSLGLAVLFGLLFSKP 386
                        N  +  VL  K    S      SK+ MPA + S SLGLA+L G +FSKP
Sbjct:   355 E-TIIIAKPEENKVK--VLENKFKTRSWISDWDSKKIMPALKLSLSLGLAILLGSMFSKP 411

Query:   387 NGIWSGLSAAISFATAREATFK-----------RTVYGVLGCFLFEKLLPIRFLFLFPWF 435
             NG W+GL  A+SFA AREATFK            TVYGV+GCF+F+K L +RFL L PWF
Sbjct:   412 NGYWAGLPVAVSFAAAREATFKVTNVKAQGTVIGTVYGVMGCFVFQKFLTVRFLSLLPWF 471

Query:   436 IFTSFLRHGRMYGQGGGISAVIGAVLILGRKSFGPPEEFAIARIVETFIGLTCTIIGELL 495
             +F+SFL   +MYGQ GGISA IGAVLILGRK+FGPP EFAI RI+ETFIGL+C+I+ EL+
Sbjct:   472 LFSSFLSRSKMYGQAGGISAAIGAVLILGRKNFGPPSEFAIERIIETFIGLSCSIMVELV 531

Query:   496 FQSTRASTLAKSQLSKRTF 514
             FQ TRA+ +AK +LS R+F
Sbjct:   532 FQPTRAANIAKLELS-RSF 549

 Score = 268 (99.4 bits), Expect = 7.8e-152, Sum P(3) = 7.8e-152
 Identities = 73/196 (37%), Positives = 108/196 (55%)

Query:   506 KSQLSK-RTFIREADVEPNFGFLPFHSACYSKLLVSLVKMVHLLHFCSYSIGFLEQESQK 564
             +S L++ + F  EA  EP+F F PF+ +CY KL  SL KM  LL F  Y+IGFL ++  K
Sbjct:   576 RSHLNELKKFTAEAHAEPSFWFSPFNFSCYEKLFKSLSKMADLLQFSGYAIGFLGEQG-K 634

Query:   565 IDKASWKEDVQKLDGDVKLVKEMACSSIKCFNDAITTIKSLAILEKKLGRKTFNVFRDIE 624
                   KE +  +D D+K + E      K F + IT +KSL  LEK L  K+ N   DIE
Sbjct:   635 TKSPQCKEILSNVDKDLKSLTESIGLLAKSFEE-ITLLKSLDALEKALA-KSDNTSWDIE 692

Query:   625 CGNSPIGLCVPNGILDSDENKEKIVINTYLQHLQELDDKIKKVD------VEEFKNQIVL 678
              G +P      N    +  ++ + ++ TYLQH + + D + +V+      VE  K+++VL
Sbjct:   693 LGKTP------NPSFSTAVSEPEKILETYLQHCRSVADGLFRVEEDGEEEVEVDKSEVVL 746

Query:   679 SLSALGYCMRSLIIET 694
             SL ALG+C+  +  ET
Sbjct:   747 SLCALGFCVERIGKET 762

 Score = 236 (88.1 bits), Expect = 7.8e-152, Sum P(3) = 7.8e-152
 Identities = 46/62 (74%), Positives = 50/62 (80%)

Query:     9 TNQARAMWLTCLASAYRTAVACTIVGSITFYGPSSRRGQVTFPAFSYVTVILIVTDATLG 68
             T + RAMW TCLASA+RTA+ACTIVGS T YGP      V FPAFSYVTVILI+TDATLG
Sbjct:     4 TERGRAMWRTCLASAFRTALACTIVGSATLYGPEWINRHVAFPAFSYVTVILIITDATLG 63

Query:    69 DT 70
             DT
Sbjct:    64 DT 65


>TAIR|locus:2074889 [details] [associations]
            symbol:AT3G09450 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
            evidence=IEA] InterPro:IPR006726 Pfam:PF04632 GO:GO:0005886
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006810 EMBL:AC016661
            EMBL:AC011436 HOGENOM:HOG000239132 IPI:IPI00536522
            RefSeq:NP_187556.1 UniGene:At.53235 PRIDE:Q9S710
            EnsemblPlants:AT3G09450.1 GeneID:820103 KEGG:ath:AT3G09450
            TAIR:At3g09450 eggNOG:NOG128078 InParanoid:Q9S710 OMA:WDNITHE
            PhylomeDB:Q9S710 ProtClustDB:CLSN2915683 Genevestigator:Q9S710
            Uniprot:Q9S710
        Length = 775

 Score = 667 (239.9 bits), Expect = 9.8e-90, Sum P(3) = 9.8e-90
 Identities = 165/421 (39%), Positives = 241/421 (57%)

Query:   109 IVLTYVMGFVNGEHSGAVMLPVRVAASTAIGVLACVLALLLPYPRLACYEVKWNCKQLAD 168
             + +T+V+   NGE +   MLPV VA STA+G +A ++A+LLP+PRLA  ++   CK  A+
Sbjct:   131 VYVTFVV--FNGEVAHVFMLPVHVAGSTALGAIASLIAVLLPFPRLAHSQMSKGCKLYAE 188

Query:   169 NASERLRLYVKALCAEDKSTALASISLAKSLTKSGTKHIQNIKRYQENMKWEIP-FKFLG 227
             NA ERL ++V+ + A D +TA   I+ A SL+ +    ++NIK + E + WE P  +FL 
Sbjct:   189 NALERLNMFVEIMMARDNTTAQVLIARAASLSAAAKNTLKNIKIHHERISWERPDTRFLS 248

Query:   228 SNY-VKPVKKFQYLELPLRGMEMAVTSATSFPM-QTFDGLPRVLEEHTCLTIKKVKSYQI 285
                 + P +K    +  LRG+E+A+ S +SFP   + D L R+LE     T    +S   
Sbjct:   249 RKQKLDPAEKLHATDFLLRGLELALGSCSSFPQGMSRDELTRLLEGPR--THIAPRSEST 306

Query:   286 LCNSMTVPESNEEYSLKNFQTIPTISQNLPFFFFLFCMKLLNYRTPKTDGSTNSCEEHV- 344
             L +  ++   +E  SL     +P          F      L   +   +G T   E H  
Sbjct:   307 LKSQDSLGWHHEAESLST-AALPVCFFRYCVELFRGDFLSLRQDSKSVNGRTTEEEIHPA 365

Query:   345 ---LSFKEACTSRACK-VKSKRFMPAFQCSFSLGLAVLFGLLFSKPNGIWSGLSAAISFA 400
                LS         C  +  +RF+ AF+CS SLGLAVLFG+L++K NG WSGL+ AIS  
Sbjct:   366 NEGLSMARKFWDILCVWMARERFVFAFKCSISLGLAVLFGILYNKNNGYWSGLTVAISLV 425

Query:   401 TAREATF----KR-------TVYGVLGCFLFEKLLPIRFLFLFPWFIFTSFLRHGRMYGQ 449
             + R+AT      R       +VYG++ C +F++L   RFL L PW I   F+RH ++YGQ
Sbjct:   426 SGRQATLTVANSRLQGTAMGSVYGLICCSVFQRLEEFRFLPLLPWIILAVFMRHSKVYGQ 485

Query:   450 GGGISAVIGAVLILGRKSFGPPEEFAIARIVETFIGLTCTIIGELLFQSTRASTLAKSQL 509
              GG++A I A+LILGR+++G P EFAIARIVE  IGL C + GE+L    RA+TLA++++
Sbjct:   486 PGGVTAAIAALLILGRRNYGAPTEFAIARIVEASIGLLCFVFGEILVTPARAATLARTEI 545

Query:   510 S 510
             S
Sbjct:   546 S 546

 Score = 469 (170.2 bits), Expect = 2.1e-62, Sum P(3) = 2.1e-62
 Identities = 128/329 (38%), Positives = 184/329 (55%)

Query:    94 PEGTHLVAKRIALGQIVLTYVMGFV-NGEHSGAVMLPVRVAASTAIGVLACVLALLLPYP 152
             P  T L+ KRIA GQIV+ YV   V NGE +   MLPV VA STA+G +A ++A+LLP+P
Sbjct:   113 PVSTSLLTKRIAFGQIVVVYVTFVVFNGEVAHVFMLPVHVAGSTALGAIASLIAVLLPFP 172

Query:   153 RLACYEVKWNCKQLADNASERLRLYVKALCAEDKSTALASISLAKSLTKSGTKHIQNIKR 212
             RLA  ++   CK  A+NA ERL ++V+ + A D +TA   I+ A SL+ +    ++NIK 
Sbjct:   173 RLAHSQMSKGCKLYAENALERLNMFVEIMMARDNTTAQVLIARAASLSAAAKNTLKNIKI 232

Query:   213 YQENMKWEIP-FKFLGSNY-VKPVKKFQYLELPLRGMEMAVTSATSFPM-QTFDGLPRVL 269
             + E + WE P  +FL     + P +K    +  LRG+E+A+ S +SFP   + D L R+L
Sbjct:   233 HHERISWERPDTRFLSRKQKLDPAEKLHATDFLLRGLELALGSCSSFPQGMSRDELTRLL 292

Query:   270 EEHTCLTIKKVKSYQILCNSMTVPESNEEYSLKNFQTIPTISQNLPFFFFLFCMKL---- 325
             E     T    +S   L +  ++   +E  SL         +  LP  FF +C++L    
Sbjct:   293 EGPR--THIAPRSESTLKSQDSLGWHHEAESLS--------TAALPVCFFRYCVELFRGD 342

Query:   326 -LNYR--TPKTDGSTNSCEEHV----LSFKEACTSRACK-VKSKRFMPAFQCSFSLGLAV 377
              L+ R  +   +G T   E H     LS         C  +  +RF+ AF+CS SLGLAV
Sbjct:   343 FLSLRQDSKSVNGRTTEEEIHPANEGLSMARKFWDILCVWMARERFVFAFKCSISLGLAV 402

Query:   378 LFGLLFSKPNGIWSGLSAAISFATAREAT 406
             LFG+L++K NG WSGL+ AIS  + R+AT
Sbjct:   403 LFGILYNKNNGYWSGLTVAISLVSGRQAT 431

 Score = 131 (51.2 bits), Expect = 9.8e-90, Sum P(3) = 9.8e-90
 Identities = 31/57 (54%), Positives = 36/57 (63%)

Query:    16 WLTCLASAYRTAVACTIVGSITFYGPSSRRGQVTFPAFSYVTVILI-VTDA--TLGD 69
             WL  L  A RTA+AC IV   T YGP   R   TFPAFSY+T ILI ++DA  T G+
Sbjct:     6 WLERLGLALRTAMACLIVSLTTLYGPKPLRHFTTFPAFSYLTTILIWLSDAEPTYGE 62

 Score = 130 (50.8 bits), Expect = 9.8e-90, Sum P(3) = 9.8e-90
 Identities = 50/183 (27%), Positives = 89/183 (48%)

Query:   514 FIREADVEPNFGFLP-FHSACYSKLLVSLVKMVHLLHFCSYSIGFLEQESQKIDKASWKE 572
             F  EA  EP   FL   ++  Y++LL S  K+  L   C Y    L+  S      ++  
Sbjct:   591 FAAEALTEPKIPFLRRLNTDSYNRLLGSFSKISDL---CLYVCDGLKNLSGVQPTLAFPW 647

Query:   573 DVQKLDGDVKLVKEMACSSIKCFNDAITTIKSLAILEKKLGRKTFNVFRDIECGNSPIGL 632
             D   +  +++  +E    S+KC  + I+  KS A L+K+L ++   +  D+E G +    
Sbjct:   648 D--NITHELRAFQEKLHPSVKCLKE-ISQTKSQARLQKELQKR--KICHDVEAGTTSNDN 702

Query:   633 CVPNGILDSDENKEKIVINTYLQHLQELDDKIKKVDVEE-FKNQIVLSLSALGYCMRSLI 691
                  +  S  + E+  ++ ++  L+E  DKI     ++ FK++  L LS+LG+C+  L+
Sbjct:   703 YSYMELGPSQADVERFSVS-FVMLLKEATDKISCNTADDAFKSETALCLSSLGFCISRLM 761

Query:   692 IET 694
              ET
Sbjct:   762 QET 764

 Score = 50 (22.7 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
 Identities = 26/82 (31%), Positives = 40/82 (48%)

Query:   105 ALGQIVLTYV--MGFVNGEHSGAVMLPVRVAASTAIGVLACVLALLLPYPRLA-CYEVKW 161
             A+ +IV   +  + FV GE    ++ P R A      +  C+ ALL     L  C E K 
Sbjct:   511 AIARIVEASIGLLCFVFGE---ILVTPARAATLARTEISHCLDALLDCIQSLVLCSEQK- 566

Query:   162 NCKQLAD--NASERLRLYVKAL 181
             N K +AD   +  +L+ +V+AL
Sbjct:   567 NQKVVADLRKSQVKLKSHVEAL 588


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      694       675    0.0010  120 3  11 22  0.47    33
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  623 (66 KB)
  Total size of DFA:  350 KB (2174 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  58.68u 0.08s 58.76t   Elapsed:  00:00:05
  Total cpu time:  58.68u 0.08s 58.76t   Elapsed:  00:00:05
  Start:  Sat May 11 08:11:14 2013   End:  Sat May 11 08:11:19 2013

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