BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045257
(107 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|323650499|gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica]
Length = 128
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/107 (96%), Positives = 103/107 (96%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
KILVLLRD RKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE
Sbjct: 22 KILVLLRDNRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDLEKEELP HMT VST EIKRAQKAEKDATVLKGSMRKRMEFLDFD
Sbjct: 82 LDLEKEELPPHMTHVSTEEIKRAQKAEKDATVLKGSMRKRMEFLDFD 128
>gi|255550399|ref|XP_002516250.1| lsm1, putative [Ricinus communis]
gi|223544736|gb|EEF46252.1| lsm1, putative [Ricinus communis]
Length = 128
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/107 (91%), Positives = 104/107 (97%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKLLG+LRSFDQFANVVLEGACER+IVGDLYCDI LGLYVIRGENVVLIGE
Sbjct: 22 KLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDLYCDILLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDLEKEELP+HMTCVS AEIKRAQKAE++AT LKGSMRKRMEFLDFD
Sbjct: 82 LDLEKEELPSHMTCVSEAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128
>gi|357450125|ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355484387|gb|AES65590.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
Length = 128
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/107 (87%), Positives = 103/107 (96%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKLLGLLRSFDQFANVVLEGACER+IVGDLYCD+PLGLYVIRGENVVLIGE
Sbjct: 22 KLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDVPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDL KEELP HMTCVS A+I++AQKAE+DA+ LKG+MRKRMEFLDFD
Sbjct: 82 LDLGKEELPPHMTCVSEADIRKAQKAERDASDLKGTMRKRMEFLDFD 128
>gi|356560171|ref|XP_003548368.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Glycine
max]
Length = 121
Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/107 (87%), Positives = 102/107 (95%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL+G LRSFDQFAN VLEGACER+IVGDLYCDIPLGLYVIRGENVVLIGE
Sbjct: 15 KLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGE 74
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDLE+EELP HMT VSTAEIKRAQKAE++A+ LKG+MRKRMEFLDFD
Sbjct: 75 LDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 121
>gi|351721438|ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
Length = 128
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/107 (87%), Positives = 102/107 (95%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL+G LRSFDQFAN VLEGACER+IVGDLYCDIPLGLYVIRGENVVLIGE
Sbjct: 22 KLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDLE+EELP HMT VSTAEIKRAQKAE++A+ LKG+MRKRMEFLDFD
Sbjct: 82 LDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRKRMEFLDFD 128
>gi|388508644|gb|AFK42388.1| unknown [Medicago truncatula]
Length = 128
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/107 (86%), Positives = 103/107 (96%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKLLGLLRSFDQFANVVL+GACER+IVGDLYCD+PLGLYVIRGENVVLIGE
Sbjct: 22 KLLVLLRDGRKLLGLLRSFDQFANVVLKGACERVIVGDLYCDVPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDL KEELP HMTCVS A+I++AQKAE+DA+ LKG+MRKRMEFLDFD
Sbjct: 82 LDLGKEELPPHMTCVSEADIRKAQKAERDASDLKGTMRKRMEFLDFD 128
>gi|255583960|ref|XP_002532727.1| lsm1, putative [Ricinus communis]
gi|223527535|gb|EEF29658.1| lsm1, putative [Ricinus communis]
Length = 128
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/107 (86%), Positives = 101/107 (94%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL+G+LRSFDQFAN VLEGACER+IVGDLYCDIPLGLY+IRGENVVLIGE
Sbjct: 22 KLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDLYCDIPLGLYIIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDLEKEELP HMT VS AEI+RAQKAE+DAT LKG+MRKRMEFLD D
Sbjct: 82 LDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRKRMEFLDLD 128
>gi|225442069|ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera]
gi|147803430|emb|CAN62239.1| hypothetical protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 190 bits (483), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/107 (86%), Positives = 100/107 (93%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRD RKLLG+LRSFDQFAN VLEGACER+IVGDLYCDIPLGLYVIRGENVVLIGE
Sbjct: 22 KLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDLEKEELP HMT VS AEIKRAQKAE++A+ LKG+MRKRMEFLD D
Sbjct: 82 LDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRKRMEFLDLD 128
>gi|359484235|ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
vinifera]
gi|297738539|emb|CBI27784.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/107 (86%), Positives = 100/107 (93%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKLLG+LRSFDQFAN VLEGACER IVGD+YCDIPLGLYVIRGENVVL+GE
Sbjct: 22 KLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDIYCDIPLGLYVIRGENVVLLGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDL+KEELP HMT V AEIKRAQKAE++AT LKGSMRKRMEFLDFD
Sbjct: 82 LDLDKEELPPHMTRVPEAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128
>gi|224119520|ref|XP_002331181.1| predicted protein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222873302|gb|EEF10433.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 187 bits (475), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 92/107 (85%), Positives = 100/107 (93%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL+GLLRSFDQFAN VLEGACER+IVGDLYCDI LGLYVIRGENVVLIGE
Sbjct: 22 KLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDLYCDIHLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDLE+EELP HMT VS AEI+RAQKAE++AT LKG+MRKRMEFLD D
Sbjct: 82 LDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRKRMEFLDLD 128
>gi|224073612|ref|XP_002304120.1| predicted protein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/107 (85%), Positives = 99/107 (92%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL+G+LRSFDQFAN VLEGACER IVGDLYCDI LGLYVIRGENVVLIGE
Sbjct: 22 KLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDLYCDIHLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDLE+EELP HMT VS AEIKRAQKAE++AT LKG+MRKRMEFLD D
Sbjct: 82 LDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTMRKRMEFLDLD 128
>gi|357149636|ref|XP_003575180.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Brachypodium distachyon]
Length = 128
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/107 (84%), Positives = 101/107 (94%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG+LYCD+PLGLYVIRGENVVLIGE
Sbjct: 22 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD EK+ELPAHMTCVS AEI+RA+KAE++A LKGSMRKRMEFLDFD
Sbjct: 82 LDREKDELPAHMTCVSEAEIRRAEKAEREARDLKGSMRKRMEFLDFD 128
>gi|449447922|ref|XP_004141715.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cucumis
sativus]
gi|449480489|ref|XP_004155908.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cucumis
sativus]
Length = 128
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/107 (83%), Positives = 99/107 (92%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKLLG+LRSFDQFAN VLEG+CER+IVGDLY DIPLGLYVIRGENVVL+GE
Sbjct: 22 KVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDLEKEELP HMT VS EIKRAQKAE++AT LKG++RKR+EFLD D
Sbjct: 82 LDLEKEELPPHMTHVSAVEIKRAQKAEREATDLKGTIRKRLEFLDLD 128
>gi|115458610|ref|NP_001052905.1| Os04g0445800 [Oryza sativa Japonica Group]
gi|113564476|dbj|BAF14819.1| Os04g0445800 [Oryza sativa Japonica Group]
gi|218194932|gb|EEC77359.1| hypothetical protein OsI_16058 [Oryza sativa Indica Group]
gi|222628944|gb|EEE61076.1| hypothetical protein OsJ_14946 [Oryza sativa Japonica Group]
Length = 129
Score = 184 bits (467), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/107 (83%), Positives = 101/107 (94%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG+LYCD+PLGLYVIRGENVVLIGE
Sbjct: 23 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGE 82
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD EK+ELPAHMTCVS AEI++A+KAE++A LKGSMRKRMEFLDFD
Sbjct: 83 LDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGSMRKRMEFLDFD 129
>gi|413918440|gb|AFW58372.1| hypothetical protein ZEAMMB73_585309, partial [Zea mays]
Length = 147
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/107 (81%), Positives = 100/107 (93%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG+ YCD+PLGLYVIRGENVVLIGE
Sbjct: 41 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGE 100
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD EK+ELPAHMTCVS AEI++A+KAE++A LKG+MRKRMEFLDFD
Sbjct: 101 LDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGTMRKRMEFLDFD 147
>gi|326500218|dbj|BAK06198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326503284|dbj|BAJ99267.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 128
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/107 (82%), Positives = 100/107 (93%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG+LYCD+PLGLYVIRGENVVLIGE
Sbjct: 22 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD EK+ELP+HMTCVS AEI+ A+KAEK+A LKG+MRKRMEFLDFD
Sbjct: 82 LDREKDELPSHMTCVSEAEIRTAEKAEKEARDLKGTMRKRMEFLDFD 128
>gi|18400270|ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|30682974|ref|NP_850580.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|21536995|gb|AAM61336.1| Sm protein, putative [Arabidopsis thaliana]
gi|27754337|gb|AAO22620.1| putative Sm protein [Arabidopsis thaliana]
gi|28393853|gb|AAO42334.1| putative Sm protein [Arabidopsis thaliana]
gi|332641944|gb|AEE75465.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|332641945|gb|AEE75466.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
Length = 128
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/107 (81%), Positives = 97/107 (90%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL+G LRSFDQFAN VLEGACER+IVG+ YCDIPLGLYVIRGENVVLIGE
Sbjct: 22 KLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD E+EELP HM VS AEIKRAQK E++A+ L+G+MRKRMEFLDFD
Sbjct: 82 LDTEREELPPHMIRVSEAEIKRAQKVEREASELRGTMRKRMEFLDFD 128
>gi|18394697|ref|NP_564072.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
gi|15724180|gb|AAL06482.1|AF411792_1 At1g19120/F14D16_26 [Arabidopsis thaliana]
gi|20334848|gb|AAM16180.1| At1g19120/F14D16_26 [Arabidopsis thaliana]
gi|332191686|gb|AEE29807.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
Length = 128
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/107 (83%), Positives = 97/107 (90%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL+GLLRSFDQFAN VLE A ER+IVGDLYCDIPLGLY+IRGENVVLIGE
Sbjct: 22 KLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDLYCDIPLGLYIIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD+EKEELPAHM V AEIKRAQKAEK+ +LKG+MRKRMEFLD D
Sbjct: 82 LDVEKEELPAHMVQVPEAEIKRAQKAEKEEMLLKGTMRKRMEFLDLD 128
>gi|242073224|ref|XP_002446548.1| hypothetical protein SORBIDRAFT_06g017930 [Sorghum bicolor]
gi|195605684|gb|ACG24672.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|195619498|gb|ACG31579.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|241937731|gb|EES10876.1| hypothetical protein SORBIDRAFT_06g017930 [Sorghum bicolor]
gi|413918442|gb|AFW58374.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 128
Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/107 (81%), Positives = 100/107 (93%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG+ YCD+PLGLYVIRGENVVLIGE
Sbjct: 22 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD EK+ELPAHMTCVS AEI++A+KAE++A LKG+MRKRMEFLDFD
Sbjct: 82 LDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGTMRKRMEFLDFD 128
>gi|21537395|gb|AAM61736.1| unknown [Arabidopsis thaliana]
Length = 128
Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/107 (83%), Positives = 97/107 (90%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL+GLLRSFDQFAN VLE A ER+IVGDLYCDIPLGLY+IRGENVVLIGE
Sbjct: 22 KLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDLYCDIPLGLYIIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD+EKEELPAHM V AEIKRAQKAEK+ +LKG+MRKRMEFLD D
Sbjct: 82 LDVEKEELPAHMLQVPEAEIKRAQKAEKEEMLLKGTMRKRMEFLDLD 128
>gi|302772304|ref|XP_002969570.1| hypothetical protein SELMODRAFT_146440 [Selaginella moellendorffii]
gi|302774851|ref|XP_002970842.1| hypothetical protein SELMODRAFT_94071 [Selaginella moellendorffii]
gi|300161553|gb|EFJ28168.1| hypothetical protein SELMODRAFT_94071 [Selaginella moellendorffii]
gi|300163046|gb|EFJ29658.1| hypothetical protein SELMODRAFT_146440 [Selaginella moellendorffii]
Length = 127
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/107 (81%), Positives = 97/107 (90%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G LRSFDQFAN+VLE A ERIIVGDLYCD+PLGLY+IRGENVVL+GE
Sbjct: 21 KLLVILRDGRKLVGTLRSFDQFANLVLEKAVERIIVGDLYCDLPLGLYIIRGENVVLVGE 80
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD K++LPAHM VS AEIKRAQKAEKDAT LKG+MRKRMEFLD D
Sbjct: 81 LDQTKKDLPAHMVLVSAAEIKRAQKAEKDATELKGTMRKRMEFLDLD 127
>gi|226497340|ref|NP_001146445.1| uncharacterized protein LOC100280029 [Zea mays]
gi|219887259|gb|ACL54004.1| unknown [Zea mays]
gi|223975439|gb|ACN31907.1| unknown [Zea mays]
gi|413918444|gb|AFW58376.1| hypothetical protein ZEAMMB73_585309 [Zea mays]
Length = 168
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/107 (81%), Positives = 100/107 (93%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG+ YCD+PLGLYVIRGENVVLIGE
Sbjct: 62 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGE 121
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD EK+ELPAHMTCVS AEI++A+KAE++A LKG+MRKRMEFLDFD
Sbjct: 122 LDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGTMRKRMEFLDFD 168
>gi|357163727|ref|XP_003579826.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Brachypodium distachyon]
Length = 128
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/107 (81%), Positives = 100/107 (93%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG+LYCD+PLGLYVIRGENVVLIGE
Sbjct: 22 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD EK+ELP+HMTCVS A+I+ A+KAEK+A LKG+MRKRMEFLDFD
Sbjct: 82 LDREKDELPSHMTCVSEADIRTAEKAEKEARDLKGTMRKRMEFLDFD 128
>gi|297844878|ref|XP_002890320.1| hypothetical protein ARALYDRAFT_472135 [Arabidopsis lyrata subsp.
lyrata]
gi|297336162|gb|EFH66579.1| hypothetical protein ARALYDRAFT_472135 [Arabidopsis lyrata subsp.
lyrata]
Length = 128
Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 88/107 (82%), Positives = 97/107 (90%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL+GLLRSFDQFAN V+E A ER+IVGDLYCDIPLGLY+IRGENVVLIGE
Sbjct: 22 KLLVLLRDGRKLMGLLRSFDQFANAVIEEAYERVIVGDLYCDIPLGLYIIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD+EKEELPA M VS AEIKRAQKAEK+ +LKG+MRKRMEFLD D
Sbjct: 82 LDVEKEELPAQMVQVSEAEIKRAQKAEKEEMLLKGTMRKRMEFLDLD 128
>gi|9294633|dbj|BAB02972.1| unnamed protein product [Arabidopsis thaliana]
Length = 118
Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 87/107 (81%), Positives = 97/107 (90%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL+G LRSFDQFAN VLEGACER+IVG+ YCDIPLGLYVIRGENVVLIGE
Sbjct: 12 KLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIPLGLYVIRGENVVLIGE 71
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD E+EELP HM VS AEIKRAQK E++A+ L+G+MRKRMEFLDFD
Sbjct: 72 LDTEREELPPHMIRVSEAEIKRAQKVEREASELRGTMRKRMEFLDFD 118
>gi|116783136|gb|ABK22805.1| unknown [Picea sitchensis]
Length = 172
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/107 (83%), Positives = 97/107 (90%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL+G+LRSFDQFAN VLE A ERIIVGDLYCD+PLGLYVIRGENVVLIGE
Sbjct: 66 KLLVLLRDGRKLIGILRSFDQFANAVLENALERIIVGDLYCDLPLGLYVIRGENVVLIGE 125
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD E+EELPA+M VS EIKRAQKAE+DAT LKGSMRKRMEFLD +
Sbjct: 126 LDPEREELPANMIHVSATEIKRAQKAERDATDLKGSMRKRMEFLDLE 172
>gi|357514091|ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
Length = 131
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/110 (79%), Positives = 98/110 (89%), Gaps = 3/110 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+L+LLRDGRKL+G LRSFDQFAN VLEGACER+IVGDLYCDIPLGLYVIRGENVVLIGE
Sbjct: 22 KLLILLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIK---RAQKAEKDATVLKGSMRKRMEFLDFD 107
+D+E+EELP HMT V T EI+ RAQK E+DA+ LKG+MRKRMEFLD D
Sbjct: 82 MDVEREELPPHMTRVPTEEIRRGIRAQKVERDASELKGTMRKRMEFLDLD 131
>gi|297829970|ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata]
gi|297328707|gb|EFH59126.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata]
Length = 128
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 97/107 (90%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL+G LRSFDQFAN VLEGACER+IVG+ YCDIPLGLYVIRGENVVLIGE
Sbjct: 22 KLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD E+EELP +M VS AEIKRAQK E++A+ L+G+MRKRMEFLDFD
Sbjct: 82 LDTEREELPPNMIRVSEAEIKRAQKVEREASELRGTMRKRMEFLDFD 128
>gi|414587042|tpg|DAA37613.1| TPA: small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 128
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 99/107 (92%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG+ YCD+PLGLYVIRGENVVLIGE
Sbjct: 22 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD EK+ELPAHMTCV AEI++A+KAE++A LKG+MRKRMEFLDFD
Sbjct: 82 LDHEKDELPAHMTCVLEAEIRKAEKAEREARDLKGTMRKRMEFLDFD 128
>gi|38344547|emb|CAD40963.2| OSJNBa0027P08.15 [Oryza sativa Japonica Group]
gi|116310232|emb|CAH67241.1| OSIGBa0140O07.9 [Oryza sativa Indica Group]
Length = 136
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/114 (78%), Positives = 101/114 (88%), Gaps = 7/114 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG+LYCD+PLGLYVIRGENVVLIGE
Sbjct: 23 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGE 82
Query: 61 L-------DLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
L D EK+ELPAHMTCVS AEI++A+KAE++A LKGSMRKRMEFLDFD
Sbjct: 83 LVWFWIEQDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGSMRKRMEFLDFD 136
>gi|168017010|ref|XP_001761041.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687727|gb|EDQ74108.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 127
Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 98/107 (91%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G+LRSFDQFANVVLEGA ERI VG+LYCD+PLGLY+IRGENVVLIGE
Sbjct: 21 KLLVILRDGRKLIGVLRSFDQFANVVLEGALERITVGELYCDLPLGLYIIRGENVVLIGE 80
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDLE+EELP+ M V+ EIK+AQKAEKDAT LKG+MRKRMEFLD D
Sbjct: 81 LDLEREELPSFMVRVTPTEIKQAQKAEKDATELKGTMRKRMEFLDID 127
>gi|226509658|ref|NP_001146909.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|195605102|gb|ACG24381.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 128
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 98/107 (91%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG YCD+PLGLYVIRGENVVLIGE
Sbjct: 22 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGGQYCDVPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LD EK+ELPAHMTCV AEI++A+KAE++A LKG+MRKRMEFLDFD
Sbjct: 82 LDHEKDELPAHMTCVLEAEIRKAEKAEREARDLKGTMRKRMEFLDFD 128
>gi|168038612|ref|XP_001771794.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676925|gb|EDQ63402.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 127
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 97/107 (90%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDG+K++G+LRSFDQFANVVLEGA ERI VG+LYCD+PLGLY+IRGENVVLIGE
Sbjct: 21 KLLVILRDGKKIIGILRSFDQFANVVLEGALERITVGELYCDLPLGLYIIRGENVVLIGE 80
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
LDL +EELP+ M V+ EIK+AQKAEKDAT LKG+MRKRMEFLD +
Sbjct: 81 LDLGREELPSFMVRVTPTEIKQAQKAEKDATELKGTMRKRMEFLDLE 127
>gi|8778287|gb|AAF79296.1|AC068602_19 F14D16.28 [Arabidopsis thaliana]
Length = 223
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/145 (61%), Positives = 97/145 (66%), Gaps = 38/145 (26%)
Query: 1 KILVLLRDGRKLLGLLRSFDQF-----------------------------ANVVLEGAC 31
K+LVLLRDGRKL+GLLRSFDQF AN VLE A
Sbjct: 79 KLLVLLRDGRKLMGLLRSFDQFGTCLSLLHRKSKVFEMVLRNVSFVFGFLEANAVLEEAY 138
Query: 32 ERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIKR--------- 82
ER+IVGDLYCDIPLGLY+IRGENVVLIGELD+EKEELPAHM V AEIKR
Sbjct: 139 ERVIVGDLYCDIPLGLYIIRGENVVLIGELDVEKEELPAHMVQVPEAEIKRVSANILLSL 198
Query: 83 AQKAEKDATVLKGSMRKRMEFLDFD 107
AQKAEK+ +LKG+MRKRMEFLD D
Sbjct: 199 AQKAEKEEMLLKGTMRKRMEFLDLD 223
>gi|195606938|gb|ACG25299.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|413918443|gb|AFW58375.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 105
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 79/85 (92%)
Query: 23 ANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIKR 82
NVVL+GACER+IVG+ YCD+PLGLYVIRGENVVLIGELD EK+ELPAHMTCVS AEI++
Sbjct: 21 TNVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRK 80
Query: 83 AQKAEKDATVLKGSMRKRMEFLDFD 107
A+KAE++A LKG+MRKRMEFLDFD
Sbjct: 81 AEKAEREARDLKGTMRKRMEFLDFD 105
>gi|414587041|tpg|DAA37612.1| TPA: hypothetical protein ZEAMMB73_983155 [Zea mays]
Length = 120
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/94 (74%), Positives = 80/94 (85%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG+ YCD+PLGLYVIRGENVVLIGE
Sbjct: 22 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLK 94
LD EK+ELPAHMTCV AEI++ + VLK
Sbjct: 82 LDHEKDELPAHMTCVLEAEIRKVFADPQSILVLK 115
>gi|303283710|ref|XP_003061146.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457497|gb|EEH54796.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 103
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/105 (66%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDG K+LG LRSFDQFAN+VLEGA ERIIV Y DIPLGLY++RGENVVL+G
Sbjct: 1 KLLVLLRDGSKILGTLRSFDQFANIVLEGAVERIIVNKSYSDIPLGLYIVRGENVVLMGG 60
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLD 105
+D KE +T VS EIK A+ AEK A LKGSM +RM+FLD
Sbjct: 61 VDESKE--TEGLTMVSNDEIKHARDAEKAAENLKGSMLQRMDFLD 103
>gi|302838708|ref|XP_002950912.1| hypothetical protein VOLCADRAFT_109782 [Volvox carteri f.
nagariensis]
gi|300264029|gb|EFJ48227.1| hypothetical protein VOLCADRAFT_109782 [Volvox carteri f.
nagariensis]
Length = 127
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++L++LRDGRK+LG+LRSFDQFAN+V+EGA ERIIVGD Y DIPLGL VIRGENVVL+G
Sbjct: 22 RLLIVLRDGRKVLGVLRSFDQFANLVIEGAVERIIVGDQYGDIPLGLQVIRGENVVLLGR 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
+D EK+ P +T VS A IK A K EK+ LK ++R RM+FLD +
Sbjct: 82 VDEEKDA-PEGLTQVSPAAIKEALKGEKELNKLKSTIRARMDFLDLE 127
>gi|255079102|ref|XP_002503131.1| like-sm protein [Micromonas sp. RCC299]
gi|226518397|gb|ACO64389.1| like-sm protein [Micromonas sp. RCC299]
Length = 127
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
KILV+LRDG K++G LRSFDQFAN+VLE ACERIIVG + DIPLGLY++RGENVVL+G+
Sbjct: 24 KILVVLRDGSKIIGFLRSFDQFANIVLENACERIIVGTSFSDIPLGLYIVRGENVVLMGD 83
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLD 105
+D E +T VS EIKR ++AEK A KG M KRM+FL+
Sbjct: 84 IDETIE--TEGLTEVSNEEIKREREAEKAADKFKGEMLKRMDFLE 126
>gi|384249031|gb|EIE22514.1| hypothetical protein COCSUDRAFT_83471 [Coccomyxa subellipsoidea
C-169]
Length = 125
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 86/107 (80%), Gaps = 1/107 (0%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV LRDGRK++G+LRSFDQFAN+VLEGA ERIIVG LY + PLGLYV+RGENVVL+G+
Sbjct: 20 RLLVQLRDGRKIVGILRSFDQFANLVLEGAVERIIVGILYAEDPLGLYVVRGENVVLLGD 79
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
+D + PA + VS AEI++ Q+ EK+ +K +M+ RM+FL+FD
Sbjct: 80 IDASHDP-PAILQKVSLAEIRQIQRDEKEQEKIKKTMKARMDFLEFD 125
>gi|159469406|ref|XP_001692854.1| Sm protein LSm1 [Chlamydomonas reinhardtii]
gi|158277656|gb|EDP03423.1| Sm protein LSm1 [Chlamydomonas reinhardtii]
Length = 126
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 83/107 (77%), Gaps = 1/107 (0%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV+LRDGRKLLG LRSFDQFAN+V+EGA ERIIVG+ + DIP+GL +IR ENVVL+G
Sbjct: 21 RLLVVLRDGRKLLGTLRSFDQFANLVIEGAVERIIVGEQFGDIPMGLQIIRAENVVLLGR 80
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
+D E + P +T + A+IK AQK EK+ LK ++R RM+FLD D
Sbjct: 81 VD-EAIDAPEGLTRIPAAQIKEAQKGEKELNKLKSTIRARMDFLDLD 126
>gi|145352933|ref|XP_001420788.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581023|gb|ABO99081.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 126
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 81/109 (74%), Gaps = 7/109 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV LRDG ++G LRSFDQFAN+VLE A ERIIVG ++ DIPLGLY++RGENVVL+G+
Sbjct: 20 RLLVALRDGSNIIGTLRSFDQFANIVLESAVERIIVGKMFSDIPLGLYIVRGENVVLMGD 79
Query: 61 L----DLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLD 105
+ DL+ E + V AEI RA++A++ A +KG + KRM+FLD
Sbjct: 80 VGANGDLDGTE---GLIEVDNAEIIRAREADQTAEAMKGDILKRMDFLD 125
>gi|307109206|gb|EFN57444.1| hypothetical protein CHLNCDRAFT_21126 [Chlorella variabilis]
Length = 112
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEK 65
LRDGRK++G L SFDQFAN+VL GA ERIIVG Y +IPLGL+V+RGENVVL+G+LD +
Sbjct: 12 LRDGRKIIGTLCSFDQFANLVLSGAKERIIVGQQYSEIPLGLHVVRGENVVLLGQLDAAR 71
Query: 66 EELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLD 105
E P + V+ A IK+AQ+AE++A +KG + R +FL
Sbjct: 72 EP-PPGLELVTEAAIKQAQRAEREAEKMKGLILARFDFLS 110
>gi|238007068|gb|ACR34569.1| unknown [Zea mays]
gi|414587040|tpg|DAA37611.1| TPA: hypothetical protein ZEAMMB73_983155 [Zea mays]
Length = 102
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 58/61 (95%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG+ YCD+PLGLYVIRGENVVLIGE
Sbjct: 22 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGE 81
Query: 61 L 61
L
Sbjct: 82 L 82
>gi|413918441|gb|AFW58373.1| hypothetical protein ZEAMMB73_585309 [Zea mays]
Length = 100
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 58/61 (95%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGRKLLG L SFDQFANVVL+GACER+IVG+ YCD+PLGLYVIRGENVVLIGE
Sbjct: 22 KLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGE 81
Query: 61 L 61
L
Sbjct: 82 L 82
>gi|424513743|emb|CCO66365.1| U6 snRNA-associated Sm-like protein LSm1 [Bathycoccus prasinos]
Length = 124
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
KILV+LRD ++G LRSFDQFAN+VLE A ER+IVG Y D+PLGLY++RGENVVL+G+
Sbjct: 20 KILVVLRDNSNIVGTLRSFDQFANIVLENAVERMIVGTHYSDVPLGLYIVRGENVVLMGD 79
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFL 104
+D E EL +T V EI+R + AE +A + G + + ++ L
Sbjct: 80 VD-EAIELKG-LTWVENDEIRRMKDAEMEADKMHGLIARNLDML 121
>gi|452820116|gb|EME27163.1| U6 snRNA-associated Sm-like protein LSm1 [Galdieria sulphuraria]
Length = 153
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+ILVL RDGR ++GLLRS+DQ+AN+VLE ER ++ D YCD PLG+++IRGENV L+GE
Sbjct: 41 QILVLQRDGRYIVGLLRSYDQYANLVLENTFERFVLNDSYCDEPLGVFIIRGENVALLGE 100
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDAT-VLKGSMRKRMEFLDFD 107
+D EKE + +H+ VS + K+ + ++ AT L S +R+E+ +D
Sbjct: 101 VDGEKESQWLSHLHTVSLEDTKKTIRGKRQATKALLHSQPERVEWTFYD 149
>gi|388508020|gb|AFK42076.1| unknown [Medicago truncatula]
Length = 99
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/57 (87%), Positives = 53/57 (92%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVL 57
K+LVLLRDGRKLLGLLRSFDQFANVVLEGACER+IVGDLYCD+PLGLYVIRG L
Sbjct: 22 KLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDVPLGLYVIRGGECCL 78
>gi|115383876|ref|XP_001208485.1| hypothetical protein ATEG_01120 [Aspergillus terreus NIH2624]
gi|114196177|gb|EAU37877.1| hypothetical protein ATEG_01120 [Aspergillus terreus NIH2624]
Length = 171
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ G+LY DIP G++++RGENV+L+GE
Sbjct: 54 KLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERMYAGNLYADIPRGIFLVRGENVLLLGE 113
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEK 88
+DL+KE ++P+H+ S E+ +K E+
Sbjct: 114 IDLDKEDDIPSHVQKASFQEVFELKKKEE 142
>gi|121715718|ref|XP_001275468.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
clavatus NRRL 1]
gi|119403625|gb|EAW14042.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
clavatus NRRL 1]
Length = 177
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 75/103 (72%), Gaps = 8/103 (7%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ERI G LY +IP G++++RGENV+L+GE
Sbjct: 60 KLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERIYAGGLYAEIPRGIFLVRGENVLLLGE 119
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRME 102
+DL+KE ++PAH+ E+ +K E A RKRM+
Sbjct: 120 IDLDKEDDVPAHVQKAPFPEVFELKKKEDAA-------RKRMD 155
>gi|317026774|ref|XP_001399521.2| small nuclear ribonucleoprotein (LSM1) [Aspergillus niger CBS
513.88]
gi|350634459|gb|EHA22821.1| hypothetical protein ASPNIDRAFT_174735 [Aspergillus niger ATCC
1015]
gi|358365679|dbj|GAA82301.1| small nuclear ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 174
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ G+LY DIP G++++RGENV+L+GE
Sbjct: 57 KLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLLGE 116
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDA 90
+DL+KE ++P H+ S E+ +K E A
Sbjct: 117 IDLDKEDDIPPHIQRASFQEVFELKKKEDGA 147
>gi|134056432|emb|CAL00599.1| unnamed protein product [Aspergillus niger]
Length = 143
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ G+LY DIP G++++RGENV+L+GE
Sbjct: 26 KLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLLGE 85
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDA 90
+DL+KE ++P H+ S E+ +K E A
Sbjct: 86 IDLDKEDDIPPHIQRASFQEVFELKKKEDGA 116
>gi|164657750|ref|XP_001730001.1| hypothetical protein MGL_2987 [Malassezia globosa CBS 7966]
gi|159103895|gb|EDP42787.1| hypothetical protein MGL_2987 [Malassezia globosa CBS 7966]
Length = 147
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+++V+LRDGRKLLG+LRS+DQFAN+VL+ A ERI +G Y D+P G +++RGENVVL+GE
Sbjct: 25 RVIVVLRDGRKLLGVLRSYDQFANLVLQDAVERIFLGHRYGDVPKGTFIVRGENVVLMGE 84
Query: 61 LDLEKEE-LPAHMTC 74
+DLEKEE +PA +
Sbjct: 85 IDLEKEENIPASIAS 99
>gi|440801773|gb|ELR22778.1| LSM domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 135
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+ILV+L+DGRKLLG+LRSFDQ+AN+VLE ERI VG+ Y + LGL+++RG+N+VL+G
Sbjct: 28 RILVVLQDGRKLLGVLRSFDQYANLVLEQTIERIYVGEQYAEKNLGLFLVRGDNIVLLGP 87
Query: 61 LDLEKEELPAH-MTCVSTAEIKRAQKAEKDATVLKGSMRKRM 101
+D +EEL +T V+ EI+ A+KAE++A + ++++M
Sbjct: 88 IDESREELCVKGLTKVTLPEIEAARKAEREAKRAQWELKQKM 129
>gi|119481233|ref|XP_001260645.1| small nuclear ribonucleoprotein (LSM1), putative [Neosartorya
fischeri NRRL 181]
gi|119408799|gb|EAW18748.1| small nuclear ribonucleoprotein (LSM1), putative [Neosartorya
fischeri NRRL 181]
Length = 177
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ G+LY DIP G++++RGENV+L+GE
Sbjct: 60 KLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLLGE 119
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAE 87
+DL+KE ++P H+ E+ +K E
Sbjct: 120 IDLDKEDDIPPHLQKAPFQEVFELKKKE 147
>gi|71001662|ref|XP_755512.1| small nuclear ribonucleoprotein (LSM1) [Aspergillus fumigatus
Af293]
gi|66853150|gb|EAL93474.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
fumigatus Af293]
gi|159129580|gb|EDP54694.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
fumigatus A1163]
Length = 177
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ G+LY DIP G++++RGENV+L+GE
Sbjct: 60 KLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLLGE 119
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAE 87
+DL+KE ++P H+ E+ +K E
Sbjct: 120 IDLDKEDDIPPHLQKAPFQEVFELKKKE 147
>gi|307172327|gb|EFN63815.1| U6 snRNA-associated Sm-like protein LSm1 [Camponotus floridanus]
Length = 138
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 75/102 (73%), Gaps = 6/102 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G L+S DQFAN+VL+ ERI VG Y DIP G++++RGENVVL+GE
Sbjct: 21 KLMVLLRDGRTLIGYLKSVDQFANIVLQSTIERIHVGQEYGDIPRGIFIVRGENVVLLGE 80
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRM 101
+D+EKE+ LP + V+ EI AQ+ E+++ K +KRM
Sbjct: 81 IDIEKEKVLP--LKKVTVDEILDAQRREQES---KQEQKKRM 117
>gi|156391102|ref|XP_001635608.1| predicted protein [Nematostella vectensis]
gi|156222703|gb|EDO43545.1| predicted protein [Nematostella vectensis]
Length = 138
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGR L+G LRS DQFAN+VL+ ERI VGD Y DIP G++++RGEN+VL+GE
Sbjct: 17 KLLVLLRDGRTLIGYLRSIDQFANLVLQETIERIYVGDRYGDIPRGIFLVRGENLVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEK 88
+D +K E+ + + VS EI AQ+AE+
Sbjct: 77 IDQDK-EVQSKLQEVSVDEILEAQRAEQ 103
>gi|388521873|gb|AFK48998.1| unknown [Lotus japonicus]
Length = 80
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/52 (90%), Positives = 50/52 (96%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRG 52
K+LVLLRDGRKL+G LRSFDQFAN VLEGACER+IVGDLYCDIPLGLYVIRG
Sbjct: 22 KLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
>gi|148298867|ref|NP_001091827.1| LSM1-like protein [Bombyx mori]
gi|95102704|gb|ABF51290.1| LSM1-like protein [Bombyx mori]
Length = 138
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 3/93 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LR DQFAN+VL ERI VG Y DIP G++++RGENVVL+GE
Sbjct: 21 KLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGKEYGDIPRGIFIVRGENVVLLGE 80
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEKDATV 92
+D +KEE LP +T VS EI AQ+ E+DA +
Sbjct: 81 IDKDKEENLP--LTEVSVDEILDAQRREQDAKI 111
>gi|148227316|ref|NP_001090109.1| uncharacterized protein LOC735185 [Xenopus laevis]
gi|76779739|gb|AAI06458.1| MGC131170 protein [Xenopus laevis]
Length = 133
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + P H VS EI Q+ E+ +
Sbjct: 77 IDLEKENDTPLHQ--VSIEEILEDQRVEQQS 105
>gi|332018346|gb|EGI58951.1| U6 snRNA-associated Sm-like protein LSm1 [Acromyrmex echinatior]
Length = 138
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 75/102 (73%), Gaps = 6/102 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G L+S DQFAN+VL+ ERI VG Y DIP G++++RGENVVL+GE
Sbjct: 21 KLMVLLRDGRTLIGYLKSVDQFANIVLQSTIERIHVGQEYGDIPRGIFIVRGENVVLLGE 80
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRM 101
+D+EKE+ LP + V+ EI AQ+ E+++ K +KR+
Sbjct: 81 IDIEKEKVLP--LKKVTVDEILDAQRREQES---KQEQKKRI 117
>gi|322779353|gb|EFZ09609.1| hypothetical protein SINV_06406 [Solenopsis invicta]
Length = 138
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 75/102 (73%), Gaps = 6/102 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G L+S DQFAN+VL+ ERI VG Y DIP G++++RGENVVL+GE
Sbjct: 21 KLMVLLRDGRTLIGYLKSVDQFANIVLQSTIERIHVGQEYGDIPRGIFIVRGENVVLLGE 80
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRM 101
+D+EKE+ LP + V+ EI AQ+ E+++ K +KR+
Sbjct: 81 IDIEKEKVLP--LKKVTVDEILDAQRREQES---KQEQKKRI 117
>gi|430813865|emb|CCJ28830.1| unnamed protein product [Pneumocystis jirovecii]
Length = 129
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V+LRDG+KL+G+LRSFDQ+AN+VL+G ERI V +Y DIP G+++IRGENVVL+GE
Sbjct: 23 KLMVILRDGKKLIGILRSFDQYANLVLQGTVERIYVDQVYGDIPRGVFIIRGENVVLVGE 82
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLK 94
+DL+K++ + VS E QK + D +K
Sbjct: 83 IDLDKKD-DLSLQKVSPVEAFNKQKIQNDLRKIK 115
>gi|321477585|gb|EFX88543.1| hypothetical protein DAPPUDRAFT_304575 [Daphnia pulex]
Length = 137
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 74/106 (69%), Gaps = 4/106 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V+LRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++++RGENV L+GE
Sbjct: 19 KVIVVLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGKEYGDIPRGVFIVRGENVALLGE 78
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEKDATVLKGSMR-KRMEFL 104
+DLEKEE +P + V EI AQ+ E+D K +R KR++ L
Sbjct: 79 IDLEKEERIP--LKQVGVEEILEAQRLEQDEKQAKEKIRLKRLKEL 122
>gi|307212313|gb|EFN88119.1| U6 snRNA-associated Sm-like protein LSm1 [Harpegnathos saltator]
Length = 134
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 3/90 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++++RGENVVL+GE
Sbjct: 17 KLMVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIVRGENVVLLGE 76
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEKD 89
+DLEKE+ LP +T V+ +I AQ+ E++
Sbjct: 77 IDLEKEKVLP--LTQVTVDDILDAQRREQE 104
>gi|350539892|ref|NP_001232304.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
gi|197128059|gb|ACH44557.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
gi|197128060|gb|ACH44558.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
gi|197128061|gb|ACH44559.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
Length = 133
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+ A
Sbjct: 77 IDLEKES-DTPLQQVSIEEILEEQRVEQQA 105
>gi|148886747|ref|NP_001092164.1| LSM1 homolog, U6 small nuclear RNA associated [Xenopus laevis]
gi|146327499|gb|AAI41744.1| LOC100049754 protein [Xenopus laevis]
Length = 133
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + P H VS EI Q+ E+ +
Sbjct: 77 IDLEKESDTPLHQ--VSIEEILEDQRIEQQS 105
>gi|320169252|gb|EFW46151.1| LSM1 protein [Capsaspora owczarzaki ATCC 30864]
Length = 137
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 58/66 (87%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V+LRDGRKL+G LRSFDQFAN+VL+ ERI VGD Y DIP G+++IRGENVVL+GE
Sbjct: 19 KLMVVLRDGRKLIGFLRSFDQFANLVLQDTIERIYVGDAYGDIPRGIFLIRGENVVLLGE 78
Query: 61 LDLEKE 66
+DL+K+
Sbjct: 79 IDLQKD 84
>gi|281210655|gb|EFA84821.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 132
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 67/89 (75%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V+LRDG+K +G++R+FDQFAN++L+ ERI VGD Y D LG++ IRG+ VV++GE
Sbjct: 15 KLIVVLRDGKKFIGVMRTFDQFANIILQDTIERIYVGDKYSDKHLGVFFIRGDTVVILGE 74
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKD 89
+D +KE +T VS EI AQ+AE++
Sbjct: 75 IDPDKEVKEKKLTKVSWEEINLAQQAERE 103
>gi|350593418|ref|XP_003359535.2| PREDICTED: hypothetical protein LOC100627320 [Sus scrofa]
Length = 267
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 151 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 210
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + P + VS EI Q+ E+ A
Sbjct: 211 IDLEKESDTP--LQQVSIEEILEEQRVEQQA 239
>gi|62988318|ref|NP_001017952.1| U6 snRNA-associated Sm-like protein LSm1 [Bos taurus]
gi|296222011|ref|XP_002757005.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Callithrix
jacchus]
gi|75057871|sp|Q5E9Z8.1|LSM1_BOVIN RecName: Full=U6 snRNA-associated Sm-like protein LSm1
gi|59857841|gb|AAX08755.1| Lsm1 protein [Bos taurus]
gi|59857907|gb|AAX08788.1| Lsm1 protein [Bos taurus]
gi|59857923|gb|AAX08796.1| Lsm1 protein [Bos taurus]
gi|296472336|tpg|DAA14451.1| TPA: U6 snRNA-associated Sm-like protein LSm1 [Bos taurus]
Length = 133
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+
Sbjct: 77 IDLEKES-DTPLQQVSIEEILEEQRVEQQT 105
>gi|7657313|ref|NP_055277.1| U6 snRNA-associated Sm-like protein LSm1 [Homo sapiens]
gi|114619705|ref|XP_001170479.1| PREDICTED: uncharacterized protein LOC746776 [Pan troglodytes]
gi|291409096|ref|XP_002720830.1| PREDICTED: Lsm1 protein [Oryctolagus cuniculus]
gi|301763723|ref|XP_002917277.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Ailuropoda melanoleuca]
gi|332240911|ref|XP_003269631.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Nomascus
leucogenys]
gi|344281630|ref|XP_003412581.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Loxodonta
africana]
gi|345781536|ref|XP_532806.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Canis lupus
familiaris]
gi|348554227|ref|XP_003462927.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cavia
porcellus]
gi|395847347|ref|XP_003796340.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Otolemur
garnettii]
gi|397521395|ref|XP_003830782.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Pan paniscus]
gi|402878015|ref|XP_003902702.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Papio anubis]
gi|410956402|ref|XP_003984831.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Felis catus]
gi|426256398|ref|XP_004021827.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Ovis aries]
gi|426359374|ref|XP_004046951.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Gorilla
gorilla gorilla]
gi|20177943|sp|O15116.1|LSM1_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm1; AltName:
Full=Cancer-associated Sm-like; AltName: Full=Small
nuclear ribonuclear CaSm
gi|2232057|gb|AAB62189.1| CaSm [Homo sapiens]
gi|5262854|emb|CAB45865.1| Lsm1 protein [Homo sapiens]
gi|12804683|gb|AAH01767.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Homo
sapiens]
gi|119583736|gb|EAW63332.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|189053287|dbj|BAG35093.1| unnamed protein product [Homo sapiens]
gi|261859266|dbj|BAI46155.1| U6 snRNA-associated Sm-like protein LSm1 [synthetic construct]
gi|351699797|gb|EHB02716.1| U6 snRNA-associated Sm-like protein LSm1 [Heterocephalus glaber]
gi|355697873|gb|EHH28421.1| Cancer-associated Sm-like protein [Macaca mulatta]
gi|355779633|gb|EHH64109.1| Cancer-associated Sm-like protein [Macaca fascicularis]
gi|380811796|gb|AFE77773.1| U6 snRNA-associated Sm-like protein LSm1 [Macaca mulatta]
gi|383412789|gb|AFH29608.1| U6 snRNA-associated Sm-like protein LSm1 [Macaca mulatta]
gi|384943820|gb|AFI35515.1| U6 snRNA-associated Sm-like protein LSm1 [Macaca mulatta]
gi|410210930|gb|JAA02684.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410252368|gb|JAA14151.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410293390|gb|JAA25295.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410336323|gb|JAA37108.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|431902255|gb|ELK08756.1| U6 snRNA-associated Sm-like protein LSm1 [Pteropus alecto]
Length = 133
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+
Sbjct: 77 IDLEKES-DTPLQQVSIEEILEEQRVEQQT 105
>gi|432099963|gb|ELK28857.1| U6 snRNA-associated Sm-like protein LSm1 [Myotis davidii]
Length = 133
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+
Sbjct: 77 IDLEKES-DTPLQQVSIEEILEEQRVEQQT 105
>gi|157820263|ref|NP_001102346.1| U6 snRNA-associated Sm-like protein LSm1 [Rattus norvegicus]
gi|149057826|gb|EDM09069.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted) [Rattus norvegicus]
Length = 133
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGRKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+ +
Sbjct: 77 IDLEKES-DTPLQQVSIEEILEEQRVEQQS 105
>gi|440897037|gb|ELR48810.1| U6 snRNA-associated Sm-like protein LSm1, partial [Bos grunniens
mutus]
Length = 118
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 2 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 61
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+
Sbjct: 62 IDLEKES-DTPLQQVSIEEILEEQRVEQQT 90
>gi|354472085|ref|XP_003498271.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Cricetulus griseus]
gi|344238558|gb|EGV94661.1| U6 snRNA-associated Sm-like protein LSm1 [Cricetulus griseus]
Length = 133
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+
Sbjct: 77 IDLEKES-DTPLQQVSIEEILEEQRVEQQT 105
>gi|149742575|ref|XP_001493258.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Equus
caballus]
Length = 133
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+
Sbjct: 77 IDLEKES-DTPLQQVSIEEILEEQRVEQQT 105
>gi|212537161|ref|XP_002148736.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
marneffei ATCC 18224]
gi|210068478|gb|EEA22569.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
marneffei ATCC 18224]
Length = 169
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 67/82 (81%), Gaps = 1/82 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ERI G+LY + +GLY++RGENV+L+GE
Sbjct: 52 KLVLVLRDGRKLIGVLRSWDQFANLVLQDTVERIYAGNLYAEEHVGLYLVRGENVLLLGE 111
Query: 61 LDLEKE-ELPAHMTCVSTAEIK 81
+DL+KE +LP +T S E++
Sbjct: 112 IDLDKEDDLPETLTQTSMKEVR 133
>gi|226372840|gb|ACO52045.1| U6 snRNA-associated Sm-like protein LSm1 [Rana catesbeiana]
Length = 133
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+ +
Sbjct: 77 IDLEKES-DTPLLQVSIEEILEEQRVEQQS 105
>gi|357609556|gb|EHJ66513.1| LSM1-like protein [Danaus plexippus]
Length = 138
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LR DQFAN+VL ERI VG Y DIP G++++RGENVVL+GE
Sbjct: 21 KLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGREYGDIPRGIFIVRGENVVLLGE 80
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEKDA 90
+D EKEE LP +T VS +I AQ+ E+D
Sbjct: 81 IDKEKEENLP--LTEVSVDDILDAQRREQDT 109
>gi|126303350|ref|XP_001372820.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Monodelphis domestica]
gi|395507426|ref|XP_003758025.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Sarcophilus
harrisii]
Length = 133
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+
Sbjct: 77 IDLEKES-DTPLQQVSIEEILEEQRVEQQT 105
>gi|389609539|dbj|BAM18381.1| Sm protein G, putative [Papilio xuthus]
Length = 138
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 69/93 (74%), Gaps = 3/93 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LR DQFAN+VL ERI VG Y DIP G++++RGENVVL+GE
Sbjct: 21 KLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGKEYGDIPRGIFIVRGENVVLLGE 80
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEKDATV 92
+D +KE+ LP +T VS +I AQ+ E+DA +
Sbjct: 81 IDKDKEDNLP--LTEVSVDDILDAQRREQDAKI 111
>gi|327284091|ref|XP_003226772.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Anolis
carolinensis]
Length = 133
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+
Sbjct: 77 IDLEKES-DTPLQQVSIEEILEIQRVEQQT 105
>gi|66770685|gb|AAY54654.1| IP04948p [Drosophila melanogaster]
Length = 137
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 3/90 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL+ ERI VG+ Y DIP G+++IRGENVVL+GE
Sbjct: 20 KLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGE 79
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEKD 89
+D EKE+ LP + +S EI AQ+ E++
Sbjct: 80 IDREKEQKLP--LKEISVDEILDAQRREQE 107
>gi|242810005|ref|XP_002485492.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
stipitatus ATCC 10500]
gi|218716117|gb|EED15539.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
stipitatus ATCC 10500]
Length = 166
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ERI G+LY + +GLY++RGENV+L+GE
Sbjct: 49 KLVLVLRDGRKLIGVLRSWDQFANLVLQDTVERIYAGNLYAEEHVGLYLVRGENVLLLGE 108
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKD 89
+DL+KE +LP + S E++ + E++
Sbjct: 109 IDLDKEDDLPESLNQASVKEVRELKAKEEE 138
>gi|326932811|ref|XP_003212506.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Meleagris
gallopavo]
Length = 133
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E A
Sbjct: 77 IDLEKES-DTLLQQVSIEEILEEQRVELQA 105
>gi|327349130|gb|EGE77987.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 239
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+G ER+ G+L+ DI G+Y+IRGENV+L+GE
Sbjct: 122 KLVLVLRDGRKLIGVLRSWDQFANLVLQGTVERLYAGNLFADIQRGIYLIRGENVLLLGE 181
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRK 99
+DL+KE ++P E+ A K ++D KG R+
Sbjct: 182 VDLDKEDDIPTGYRQAPFEEV-FALKKQEDNERKKGDKRR 220
>gi|363742099|ref|XP_424387.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Gallus gallus]
Length = 133
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E A
Sbjct: 77 IDLEKES-DTLLQQVSIEEILEEQRVELQA 105
>gi|255946201|ref|XP_002563868.1| Pc20g13900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588603|emb|CAP86719.1| Pc20g13900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 177
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+V + ER+ G LY D+P G++++RGENV+L+GE
Sbjct: 60 KLVLILRDGRKLIGVLRSWDQFANLVFQDTVERVYAGQLYADVPRGIFIVRGENVLLLGE 119
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRK 99
+DL++E ++P +T E+ +K E DA G ++
Sbjct: 120 VDLDREDDIPPTLTRAPFEEVFELKKKE-DAKRKTGDKKR 158
>gi|58332084|ref|NP_001011191.1| LSM1 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
gi|56268999|gb|AAH87559.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Xenopus (Silurana) tropicalis]
Length = 133
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+ +
Sbjct: 77 IDLEKES-DTPLLQVSIEEILEDQRVEQQS 105
>gi|110625667|ref|NP_080308.1| U6 snRNA-associated Sm-like protein LSm1 [Mus musculus]
gi|20177947|sp|Q8VC85.1|LSM1_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm1
gi|18204794|gb|AAH21460.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gi|26334347|dbj|BAC30891.1| unnamed protein product [Mus musculus]
gi|148700874|gb|EDL32821.1| mCG14522 [Mus musculus]
Length = 133
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ ++
Sbjct: 77 IDLEKES-DTPLQQVSIEEILEEQRVQQQT 105
>gi|291228074|ref|XP_002734007.1| PREDICTED: Lsm1 protein-like [Saccoglossus kowalevskii]
Length = 134
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 67/89 (75%), Gaps = 3/89 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KLLVVLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKEYGDIPRGVFVVRGENVVLLGE 76
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEK 88
+DLE E ++P + VS EI AQ++E+
Sbjct: 77 IDLENEGKIP--LKEVSIDEILEAQRSEQ 103
>gi|238496495|ref|XP_002379483.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
flavus NRRL3357]
gi|317147143|ref|XP_003189890.1| small nuclear ribonucleoprotein (LSM1) [Aspergillus oryzae RIB40]
gi|220694363|gb|EED50707.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
flavus NRRL3357]
Length = 174
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ G+LY +I G++++RGENV+L+GE
Sbjct: 57 KLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYAEISRGIFLVRGENVLLLGE 116
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDA 90
+DL+KE ++P H+ E+ + +K E A
Sbjct: 117 IDLDKEDDIPPHVQKAPFEEVFKLKKQEDSA 147
>gi|417408540|gb|JAA50816.1| Putative small nuclear ribonucleoprotein splicing factor, partial
[Desmodus rotundus]
Length = 195
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 79 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 138
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+
Sbjct: 139 IDLEKES-DTPLQQVSIEEILEEQRVEQQT 167
>gi|66529526|ref|XP_624639.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Apis
mellifera]
gi|340709308|ref|XP_003393252.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Bombus
terrestris]
gi|350425090|ref|XP_003494008.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Bombus
impatiens]
gi|380023316|ref|XP_003695469.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Apis
florea]
Length = 134
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 68/90 (75%), Gaps = 3/90 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++++RGENVVL+GE
Sbjct: 17 KLMVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIVRGENVVLLGE 76
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKD 89
+D +KE +LP +T VS +I AQ+ E++
Sbjct: 77 IDRDKERDLP--LTEVSVDDILDAQRREQE 104
>gi|383861132|ref|XP_003706040.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Megachile
rotundata]
Length = 134
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 68/90 (75%), Gaps = 3/90 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++++RGENVVL+GE
Sbjct: 17 KLMVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIVRGENVVLLGE 76
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKD 89
+D +KE +LP +T VS +I AQ+ E++
Sbjct: 77 IDRDKEKDLP--LTEVSVDDILDAQRREQE 104
>gi|197128062|gb|ACH44560.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
Length = 133
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K L LLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLGLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DLEKE + VS EI Q+ E+ A
Sbjct: 77 IDLEKER-DTPLQQVSIEEILEEQRVEQQA 105
>gi|384494127|gb|EIE84618.1| hypothetical protein RO3G_09328 [Rhizopus delemar RA 99-880]
Length = 125
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V+LRDGRKL+G+LRSFDQFAN+VL+ ERI V Y DIP G+++IRGENVVL+GE
Sbjct: 22 KLMVVLRDGRKLIGILRSFDQFANLVLQDTIERIYVRGCYGDIPRGVFLIRGENVVLLGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQK 85
+D++KE+ ++ VS EI AQ+
Sbjct: 82 IDVDKED-QINLRQVSVEEILVAQR 105
>gi|91093274|ref|XP_971370.1| PREDICTED: similar to LSM1-like protein [Tribolium castaneum]
gi|270016827|gb|EFA13273.1| hypothetical protein TcasGA2_TC001544 [Tribolium castaneum]
Length = 136
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++++RGENVVL+GE
Sbjct: 19 KLMVLLRDGRTLIGYLRSVDQFANLVLHHTIERIHVGKEYGDIPRGVFIVRGENVVLLGE 78
Query: 61 LDLEKE-ELPAHMTCVSTAEI 80
+D EKE ELP +T VS EI
Sbjct: 79 IDAEKEAELP--LTEVSVDEI 97
>gi|345565028|gb|EGX47984.1| hypothetical protein AOL_s00081g311 [Arthrobotrys oligospora ATCC
24927]
Length = 262
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G LRS+DQ+AN+VL+ ER+ +LY D+P G Y++RGENV+L+GE
Sbjct: 29 KLVIVLRDGRKLIGTLRSYDQYANLVLQDTIERLYSQNLYADVPRGCYIVRGENVLLLGE 88
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEK 88
+DL+KE + P V EI AQ+AE
Sbjct: 89 IDLDKEDDTPLKQATVD--EIYDAQRAEN 115
>gi|66814660|ref|XP_641509.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74856091|sp|Q54W83.1|LSM1_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm1
gi|60469541|gb|EAL67532.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 129
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 62/83 (74%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V+LRDGRK +G++R+FDQFAN+VL+ ERI VGD Y D LGL+ IRG+NVV++GE
Sbjct: 12 KLIVVLRDGRKFIGIMRTFDQFANIVLQDTIERIYVGDCYSDKNLGLFFIRGDNVVILGE 71
Query: 61 LDLEKEELPAHMTCVSTAEIKRA 83
+D +KE + +S EI +A
Sbjct: 72 IDPDKEVQEKKLKKISWDEITKA 94
>gi|156553084|ref|XP_001600131.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Nasonia
vitripennis]
Length = 134
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 73/102 (71%), Gaps = 6/102 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++++RGENVVL+GE
Sbjct: 17 KLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGKEYGDIPRGVFIVRGENVVLLGE 76
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRM 101
+D +KE+ LP ++ VS +I AQ+ E++ LK +RM
Sbjct: 77 IDKDKEKNLP--LSEVSVDDILDAQRREQE---LKQDQERRM 113
>gi|425774010|gb|EKV12333.1| hypothetical protein PDIG_44610 [Penicillium digitatum PHI26]
gi|425782493|gb|EKV20399.1| hypothetical protein PDIP_16600 [Penicillium digitatum Pd1]
Length = 172
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+V + ER+ G L+ D+P G++++RGENV+L+GE
Sbjct: 55 KLVLILRDGRKLIGVLRSWDQFANLVFQDTVERVYAGHLFADVPRGIFIVRGENVLLLGE 114
Query: 61 LDLEKE-ELPAHMTCVSTAEI 80
+DL++E ++P +T S E+
Sbjct: 115 VDLDREDDIPPTLTRASFEEV 135
>gi|19112312|ref|NP_595520.1| mRNA decapping complex subunit (predicted) [Schizosaccharomyces
pombe 972h-]
gi|3287944|sp|P87173.1|LSM1_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm1
gi|2117304|emb|CAB09117.1| mRNA decapping complex subunit (predicted) [Schizosaccharomyces
pombe]
Length = 140
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 58/66 (87%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V+LRDG+KL+G+LRSFDQFAN++L+ ERI V D+Y DI G+Y++RGENVVL+GE
Sbjct: 23 KVIVVLRDGKKLIGILRSFDQFANLMLQYTIERIYVDDMYGDIDRGVYIVRGENVVLLGE 82
Query: 61 LDLEKE 66
LDL+KE
Sbjct: 83 LDLDKE 88
>gi|57525910|ref|NP_001003551.1| U6 snRNA-associated Sm-like protein LSm1 [Danio rerio]
gi|50417210|gb|AAH78334.1| Zgc:101136 [Danio rerio]
Length = 133
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G+LRS DQFAN+VL ERI VG + DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DL+K E + VS EI Q+ E+ A
Sbjct: 77 VDLDK-ECDQILQRVSIEEILEEQRTEQQA 105
>gi|170047804|ref|XP_001851399.1| CaSm [Culex quinquefasciatus]
gi|167870086|gb|EDS33469.1| CaSm [Culex quinquefasciatus]
Length = 134
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL ERI VG+ Y DI G+++IRGENVVL+GE
Sbjct: 18 KLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFIIRGENVVLLGE 77
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDA 90
+D EKE LP + +S +I AQ+ E++A
Sbjct: 78 IDREKENNLP--LKEISVDDILDAQRREQEA 106
>gi|390358403|ref|XP_003729250.1| PREDICTED: LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein
LSm1-like [Strongylocentrotus purpuratus]
Length = 134
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGR L+G+LRS DQFAN+VL ERI VG Y DIP G+ V+RGENVVL+GE
Sbjct: 17 KLLVVLRDGRTLIGILRSIDQFANLVLHRTIERIHVGRQYGDIPRGVXVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEK 88
+D E E + + VS EI AQ+ E+
Sbjct: 77 IDTENESTHS-LEEVSIDEILEAQRDEQ 103
>gi|290562435|gb|ADD38614.1| U6 snRNA-associated Sm-like protein LSm1 [Lepeophtheirus salmonis]
Length = 138
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G+LRS DQ+AN+VL A ERI VG+ Y DIP G++V+RGENVVL+GE
Sbjct: 19 KLMVLLRDGRTLIGILRSVDQYANLVLHRAIERIHVGNDYGDIPRGIFVVRGENVVLLGE 78
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEK 88
+D +E E + + VS EI AQ ++
Sbjct: 79 IDEVRESEANSKLREVSLEEILEAQTKQQ 107
>gi|330842218|ref|XP_003293079.1| hypothetical protein DICPUDRAFT_157882 [Dictyostelium purpureum]
gi|325076610|gb|EGC30382.1| hypothetical protein DICPUDRAFT_157882 [Dictyostelium purpureum]
Length = 131
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 62/83 (74%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V+LRDGRK +G++R+FDQFAN+VL+ ERI VGD Y D LG++ IRG+NVV++GE
Sbjct: 14 KLIVVLRDGRKFIGMMRTFDQFANIVLQDTIERIYVGDCYSDKNLGVFFIRGDNVVILGE 73
Query: 61 LDLEKEELPAHMTCVSTAEIKRA 83
+D ++E + VS EI +A
Sbjct: 74 IDPDREVQEKKLKKVSWDEITKA 96
>gi|82571526|gb|AAI10195.1| LSM1 protein [Bos taurus]
Length = 95
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEI 80
+DLEKE + VS EI
Sbjct: 77 IDLEKES-DTPLQQVSIEEI 95
>gi|157136994|ref|XP_001656966.1| Sm protein G, putative [Aedes aegypti]
gi|108884233|gb|EAT48458.1| AAEL000478-PA [Aedes aegypti]
Length = 160
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL ERI VG+ Y DI G+++IRGENVVL+GE
Sbjct: 44 KLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFIIRGENVVLLGE 103
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDA 90
+D EKE LP + +S +I AQ+ E++A
Sbjct: 104 IDREKENNLP--LKEISVDDILDAQRREQEA 132
>gi|449298949|gb|EMC94963.1| hypothetical protein BAUCODRAFT_34961 [Baudoinia compniacensis UAMH
10762]
Length = 198
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 76/111 (68%), Gaps = 6/111 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V LRDGRKL+G+LRS+DQF N+VL+ ER+ V ++Y DI GL+++RGENV L+GE
Sbjct: 81 KLMVALRDGRKLIGVLRSWDQFGNLVLQDTVERLFVQNVYADIDRGLFLVRGENVSLLGE 140
Query: 61 LDLEKEEL---PAHMTCVSTA-EIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
+DL+K++ P + V +K+A+ AE+ T + +KR+ L F+
Sbjct: 141 IDLDKDDYIPEPYQLASVEKVFALKKAEDAERKKT--DKTKQKRLADLGFE 189
>gi|348673586|gb|EGZ13405.1| hypothetical protein PHYSODRAFT_316685 [Phytophthora sojae]
Length = 122
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 57/72 (79%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++L++LRDGR L+G LRSFDQ++N++LE ER + G L+CDI LGL +IRG+N+VL+GE
Sbjct: 18 QVLMVLRDGRHLVGYLRSFDQYSNIILEDTYERHVAGGLFCDIELGLNIIRGDNIVLLGE 77
Query: 61 LDLEKEELPAHM 72
LD +KE HM
Sbjct: 78 LDSDKERDQPHM 89
>gi|315051182|ref|XP_003174965.1| hypothetical protein MGYG_02493 [Arthroderma gypseum CBS 118893]
gi|311340280|gb|EFQ99482.1| hypothetical protein MGYG_02493 [Arthroderma gypseum CBS 118893]
Length = 204
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 74/105 (70%), Gaps = 3/105 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ +LY DIP G++++RGENV+L+GE
Sbjct: 87 KLVLVLRDGRKLIGVLRSWDQFANIVLQDTVERLYAENLYADIPRGVFLVRGENVLLLGE 146
Query: 61 LDLEK-EELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFL 104
+DL+K +++P +E+ + +K ++ K RKR L
Sbjct: 147 IDLDKDDDIPEPYRQAPASEVLKLKKQAEEQRKRKD--RKRSSHL 189
>gi|407917694|gb|EKG10998.1| hypothetical protein MPH_12001 [Macrophomina phaseolina MS6]
Length = 170
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V LRDGRKL+G+LRS+DQFAN+VL+ ERI V +LY DI G++++RGENV+L+GE
Sbjct: 53 KLMVALRDGRKLIGVLRSWDQFANLVLQETIERIFVQNLYADINRGVFLVRGENVLLLGE 112
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKR 100
+DL+K++ +P ++ QK E + + + +R++
Sbjct: 113 IDLDKDDYIPEPFEQAPAEKVFALQKQEIEERMKRDKLRRK 153
>gi|452988559|gb|EME88314.1| hypothetical protein MYCFIDRAFT_126773 [Pseudocercospora fijiensis
CIRAD86]
Length = 144
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 68/92 (73%), Gaps = 4/92 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V+LRDGRKL+G+LRS+DQF N+VL+ ER+ V DLY DI GL+++RGENV+++GE
Sbjct: 27 KLMVVLRDGRKLIGVLRSWDQFGNLVLQDTIERLFVHDLYADIERGLFLVRGENVLILGE 86
Query: 61 LDLEKEELPAHMTCVSTA----EIKRAQKAEK 88
+DL+K++ ++ A E+K+ Q E+
Sbjct: 87 IDLDKDDYIPEPYQLAPAEKVFELKKQQDQER 118
>gi|392868828|gb|EAS34628.2| small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 209
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 59/67 (88%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ G+LY + P G+Y++RGENV+L+GE
Sbjct: 92 KLVLILRDGRKLIGVLRSWDQFANLVLQDTVERVYSGNLYGEEPRGVYLVRGENVLLLGE 151
Query: 61 LDLEKEE 67
+DL+KE+
Sbjct: 152 IDLDKED 158
>gi|198437342|ref|XP_002124367.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm1
(Cancer-associated Sm-like) (Small nuclear ribonuclear
CaSm) [Ciona intestinalis]
Length = 133
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LV+LRDGR L+G LRS DQFAN+VL ER+ VG +Y DIP G++VIRGENVVL+GE
Sbjct: 17 KQLVMLRDGRILIGYLRSVDQFANLVLHKTVERVHVGSMYGDIPRGIFVIRGENVVLLGE 76
Query: 61 LDLEKEE 67
+D+E EE
Sbjct: 77 VDIEHEE 83
>gi|303315247|ref|XP_003067631.1| U6 snRNA-associated Sm-like protein LSm1, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240107301|gb|EER25486.1| U6 snRNA-associated Sm-like protein LSm1, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320035563|gb|EFW17504.1| small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
Length = 209
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 59/67 (88%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ G+LY + P G+Y++RGENV+L+GE
Sbjct: 92 KLVLILRDGRKLIGVLRSWDQFANLVLQDTVERVYSGNLYGEEPRGVYLVRGENVLLLGE 151
Query: 61 LDLEKEE 67
+DL+KE+
Sbjct: 152 IDLDKED 158
>gi|405961598|gb|EKC27377.1| U6 snRNA-associated Sm-like protein LSm1 [Crassostrea gigas]
Length = 133
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 54/69 (78%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KLLVVLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEELP 69
+DLE E P
Sbjct: 77 IDLENENNP 85
>gi|349805161|gb|AEQ18053.1| putative u6 snrna-associated sm protein lsm1 [Hymenochirus
curtipes]
Length = 83
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 53/67 (79%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKEE 67
+DLEKE
Sbjct: 77 IDLEKES 83
>gi|125811580|ref|XP_001361929.1| GA18077 [Drosophila pseudoobscura pseudoobscura]
gi|195170162|ref|XP_002025882.1| GL10169 [Drosophila persimilis]
gi|54637105|gb|EAL26508.1| GA18077 [Drosophila pseudoobscura pseudoobscura]
gi|194110746|gb|EDW32789.1| GL10169 [Drosophila persimilis]
Length = 137
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL+ ERI VG+ Y DIP G+++IRGENVVL+GE
Sbjct: 20 KLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNQYGDIPRGVFIIRGENVVLLGE 79
Query: 61 LDLEKEE-LPAHMTCVSTAEI 80
+D EKE+ LP + +S EI
Sbjct: 80 IDREKEQKLP--LKEISVDEI 98
>gi|326475987|gb|EGD99996.1| U6 snRNA-associated Sm-like protein LSm1 [Trichophyton tonsurans
CBS 112818]
gi|326485013|gb|EGE09023.1| small nuclear ribonucleoprotein [Trichophyton equinum CBS 127.97]
Length = 202
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ +LY DIP G++++RGENV+L+GE
Sbjct: 85 KLVLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAENLYADIPRGVFLVRGENVLLLGE 144
Query: 61 LDLEK-EELPAHMTCVSTAEI-KRAQKAEKDATVLKGSMRKRMEFLDFD 107
+DL+K +++P +E+ K ++AE+ ++ L F+
Sbjct: 145 IDLDKDDDIPEPYRQAPASEVLKLKKQAEERRKRKDKKRSSHLQALGFE 193
>gi|194881822|ref|XP_001975020.1| GG20797 [Drosophila erecta]
gi|190658207|gb|EDV55420.1| GG20797 [Drosophila erecta]
Length = 137
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL+ ERI VG+ Y DIP G+++IRGENVVL+GE
Sbjct: 20 KLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGE 79
Query: 61 LDLEKEE-LPAHMTCVSTAEI 80
+D EKE+ LP + VS EI
Sbjct: 80 IDREKEQKLP--LKEVSVDEI 98
>gi|339248761|ref|XP_003373368.1| putative LSM domain protein [Trichinella spiralis]
gi|316970522|gb|EFV54449.1| putative LSM domain protein [Trichinella spiralis]
Length = 139
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGR ++G LRS DQFAN+VLE ERI+V ++Y DI +GL+++RGENV L+GE
Sbjct: 21 KVLVILRDGRNMIGYLRSVDQFANIVLEDTVERIVVNNMYSDISMGLFIVRGENVFLVGE 80
Query: 61 LDLEK--EELPAHMT 73
LD K EE+ T
Sbjct: 81 LDQNKPMEEILTKTT 95
>gi|353237452|emb|CCA69424.1| related to LSM1-Sm-like (Lsm) protein [Piriformospora indica DSM
11827]
Length = 136
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G+LRS+DQFAN+VLEG ER +G + ++P+G+ VIRGENVVL+GE
Sbjct: 20 KVLVILRDGRKLIGVLRSYDQFANLVLEGTIERKHLGPYFAELPVGVMVIRGENVVLLGE 79
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAE 87
+DL+ E E+P ++ ++ ++ E
Sbjct: 80 IDLDVEDEVPLQPVPLNELDVAYKRETE 107
>gi|312380092|gb|EFR26184.1| hypothetical protein AND_26313 [Anopheles darlingi]
Length = 134
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLL DGR L+G LRS DQFAN+VL ERI VG+ Y DI G+++IRGENVVL+GE
Sbjct: 18 KLMVLLHDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFIIRGENVVLLGE 77
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDA 90
+D EKE LP + +S +I AQ+ E++A
Sbjct: 78 IDREKESNLP--LREISVDDILDAQRREQEA 106
>gi|327303990|ref|XP_003236687.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326462029|gb|EGD87482.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 201
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ +LY DIP G++++RGENV+L+GE
Sbjct: 84 KLVLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAENLYADIPRGVFLVRGENVLLLGE 143
Query: 61 LDLEK-EELPAHMTCVSTAEI-KRAQKAEKDATVLKGSMRKRMEFLDFD 107
+DL+K +++P +E+ K ++AE+ ++ L F+
Sbjct: 144 IDLDKDDDIPEPYRQAPASEVLKLKKQAEERRKRKDKKRSTHLQALGFE 192
>gi|47209042|emb|CAF91744.1| unnamed protein product [Tetraodon nigroviridis]
Length = 133
Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+V ERI VG + DIP G++++RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DL+K A + VS EI Q+ E+ A
Sbjct: 77 IDLDK-PCDAFLQQVSIEEILEEQRMEQQA 105
>gi|24656769|ref|NP_611559.1| LSm1 [Drosophila melanogaster]
gi|195346337|ref|XP_002039722.1| GM15742 [Drosophila sechellia]
gi|195486602|ref|XP_002091574.1| GE13737 [Drosophila yakuba]
gi|195585326|ref|XP_002082440.1| GD25220 [Drosophila simulans]
gi|7291257|gb|AAF46688.1| LSm1 [Drosophila melanogaster]
gi|66770707|gb|AAY54665.1| IP04848p [Drosophila melanogaster]
gi|194135071|gb|EDW56587.1| GM15742 [Drosophila sechellia]
gi|194177675|gb|EDW91286.1| GE13737 [Drosophila yakuba]
gi|194194449|gb|EDX08025.1| GD25220 [Drosophila simulans]
gi|220951410|gb|ACL88248.1| CG4279-PA [synthetic construct]
Length = 137
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL+ ERI VG+ Y DIP G+++IRGENVVL+GE
Sbjct: 20 KLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGE 79
Query: 61 LDLEKEE-LPAHMTCVSTAEI 80
+D EKE+ LP + +S EI
Sbjct: 80 IDREKEQKLP--LKEISVDEI 98
>gi|225713684|gb|ACO12688.1| U6 snRNA-associated Sm-like protein LSm1 [Lepeophtheirus salmonis]
Length = 138
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G+LR DQ+AN+VL A ERI VG+ Y DIP G++V+RGENVVL+GE
Sbjct: 19 KLMVLLRDGRTLIGILRPVDQYANLVLHRAIERIHVGNDYGDIPRGIFVVRGENVVLLGE 78
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEK 88
+D +E E + + VS EI AQ ++
Sbjct: 79 IDEVRESEANSKLREVSLEEILEAQTKQQ 107
>gi|194754723|ref|XP_001959644.1| GF12971 [Drosophila ananassae]
gi|195123083|ref|XP_002006039.1| GI18766 [Drosophila mojavensis]
gi|190620942|gb|EDV36466.1| GF12971 [Drosophila ananassae]
gi|193911107|gb|EDW09974.1| GI18766 [Drosophila mojavensis]
Length = 137
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL+ ERI VG+ Y DIP G+++IRGENVVL+GE
Sbjct: 20 KLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGE 79
Query: 61 LDLEKEE-LPAHMTCVSTAEI 80
+D EKE+ LP + +S EI
Sbjct: 80 IDREKEQKLP--LKEISVDEI 98
>gi|405961597|gb|EKC27376.1| U6 snRNA-associated Sm-like protein LSm1 [Crassostrea gigas]
Length = 124
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 54/70 (77%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 8 KLLVVLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKKYGDIPRGIFVVRGENVVLLGE 67
Query: 61 LDLEKEELPA 70
+DLE E P
Sbjct: 68 IDLENENNPQ 77
>gi|195025615|ref|XP_001986091.1| GH21171 [Drosophila grimshawi]
gi|193902091|gb|EDW00958.1| GH21171 [Drosophila grimshawi]
Length = 137
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL+ ERI VG+ Y DIP G+++IRGENVVL+GE
Sbjct: 20 KLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGE 79
Query: 61 LDLEKEE-LP 69
+D EKE+ LP
Sbjct: 80 IDREKEQKLP 89
>gi|346471247|gb|AEO35468.1| hypothetical protein [Amblyomma maculatum]
Length = 135
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDL 63
V LRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++VIRG+NVVL+GE+D
Sbjct: 22 VFLRDGRTLIGYLRSIDQFANLVLHQTIERIHVGKQYGDIPRGIFVIRGDNVVLLGEIDE 81
Query: 64 EKEELPAHMTCVSTAEIKRAQKAEKDA 90
EKE+ + VS +I Q+ E DA
Sbjct: 82 EKEK-DVDLEEVSVEDILEVQRIEADA 107
>gi|443898710|dbj|GAC76044.1| UDP-glucose pyrophosphorylase [Pseudozyma antarctica T-34]
Length = 148
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDG+KL+G+LRS+DQFAN+VL+ ER+ VG+ Y DI G++++RGENVVL+GE
Sbjct: 25 KMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDIARGVFLVRGENVVLMGE 84
Query: 61 LDLEKE-ELPAHMTC 74
+DL+ E E+P +
Sbjct: 85 IDLDAEDEVPPSIAA 99
>gi|449019941|dbj|BAM83343.1| similar to Sm-like protein LSm1 [Cyanidioschyzon merolae strain
10D]
Length = 124
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 6/111 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD-LYCDIPLGLYVIRGENVVLIG 59
++LV LRDGR LG LRSFDQ+ N+ LE A ER++V D + DIP GL V RGENVVL G
Sbjct: 12 RVLVYLRDGRFFLGYLRSFDQYGNLTLEDATERVVVNDEAFADIPRGLQVFRGENVVLFG 71
Query: 60 ELDLEKEELP--AHMTCVSTAEIKRAQKA-EKDATVLKGSMRKRMEFLDFD 107
+D E+ EL + V+ EI+R ++A +D L+ R+R+E+ FD
Sbjct: 72 AVDSEQRELEFLRKLRRVTEEEIRRMEQAVAEDHAALR--RRERLEWPAFD 120
>gi|427786347|gb|JAA58625.1| Putative der and-387 small nuclear ribonucleoprotein splicing
factor [Rhipicephalus pulchellus]
Length = 135
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDL 63
V LRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++VIRG+NVVL+GE+D
Sbjct: 22 VFLRDGRTLIGYLRSIDQFANLVLHQTIERIHVGRQYGDIPRGIFVIRGDNVVLLGEIDE 81
Query: 64 EKEELPAHMTCVSTAEIKRAQKAEKDA 90
+KE+ A + VS +I Q+ E DA
Sbjct: 82 DKEK-DADLEEVSVEDILEVQRIEADA 107
>gi|343429796|emb|CBQ73368.1| related to LSM1-Sm-like (Lsm) protein [Sporisorium reilianum
SRZ2]
Length = 148
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDG+KL+G+LRS+DQFAN+VL+ ER+ VG+ Y DI G++++RGENVVL+GE
Sbjct: 25 KMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDIARGVFLVRGENVVLMGE 84
Query: 61 LDLEKE-ELPAHMTC 74
+DL+ E E+P +
Sbjct: 85 IDLDAEDEVPPSIAA 99
>gi|242021605|ref|XP_002431235.1| lsm1, putative [Pediculus humanus corporis]
gi|212516484|gb|EEB18497.1| lsm1, putative [Pediculus humanus corporis]
Length = 139
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL ERI VG Y DI G++++RGEN+VL+GE
Sbjct: 22 KLMVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGKEYGDIYRGVFIVRGENMVLLGE 81
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDA 90
+D++KE +LP + VS +I AQ+ E++A
Sbjct: 82 IDVDKEKDLP--LDEVSVDDILDAQRREQEA 110
>gi|324527990|gb|ADY48863.1| U6 snRNA-associated Sm-like protein LSm1 [Ascaris suum]
Length = 141
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDL 63
V+LRDGR L+G LR+ DQFAN+VL ERI V Y DIP G+++IRGENVVL GE+D
Sbjct: 24 VILRDGRTLIGYLRTIDQFANLVLHETLERIHVDKYYGDIPRGIFLIRGENVVLAGEIDE 83
Query: 64 EKEELPAHMTCVSTAEIKRAQKAEKDA 90
EKE+ +TCVS EI Q+ + +A
Sbjct: 84 EKEKHTG-LTCVSVDEILSMQREKAEA 109
>gi|71017769|ref|XP_759115.1| hypothetical protein UM02968.1 [Ustilago maydis 521]
gi|46098907|gb|EAK84140.1| hypothetical protein UM02968.1 [Ustilago maydis 521]
Length = 148
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDG+KL+G+LRS+DQFAN+VL+ ER+ VG+ Y D+ G++++RGENVVL+GE
Sbjct: 25 KMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDVARGIFLVRGENVVLMGE 84
Query: 61 LDLEKE-ELPAHMTC 74
+DL+ E E+P +
Sbjct: 85 IDLDAEDEVPPSIAA 99
>gi|195382173|ref|XP_002049805.1| GJ21790 [Drosophila virilis]
gi|194144602|gb|EDW60998.1| GJ21790 [Drosophila virilis]
Length = 137
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL+ ERI VG+ Y DIP G+++IRGENVVL+GE
Sbjct: 20 KLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNQYGDIPRGVFIIRGENVVLLGE 79
Query: 61 LDLEKEE-LPAHMTCVSTAEI 80
+D +KE+ LP + +S EI
Sbjct: 80 IDRDKEQKLP--LKEISVDEI 98
>gi|299472050|emb|CBN80133.1| Sm-like protein LSm1 [Ectocarpus siliculosus]
Length = 138
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+++V+LRDGR L+G++RS+DQF+N+VLE ER V D++ DI LGLY++RG+ +VL+GE
Sbjct: 35 RVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGE 94
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQK 85
LD +EE P + VS EI AQ+
Sbjct: 95 LDETREETP-RLRRVSADEIIEAQQ 118
>gi|221129197|ref|XP_002167435.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Hydra
magnipapillata]
Length = 140
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV+LRDGR L+G LRS DQFANVVLE ERI VG+ Y DI G++++RG+N+VL+GE
Sbjct: 22 RLLVVLRDGRTLIGELRSVDQFANVVLENTIERIHVGNKYGDISRGVFIVRGDNIVLLGE 81
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFL 104
+D KE+ + + V+ EI AQ+ E + K + KR +L
Sbjct: 82 MDALKEK-SSGLKEVTVEEILEAQRVE---LLQKEQLEKRYNYL 121
>gi|388853835|emb|CCF52556.1| related to LSM1-Sm-like (Lsm) protein [Ustilago hordei]
Length = 148
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDG+KL+G+LRS+DQFAN+VL+ ER+ VG+ Y DI G++++RGENVVL+GE
Sbjct: 25 KMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDIVRGVFLVRGENVVLMGE 84
Query: 61 LDLEKE-ELPAHMTC 74
+DL+ E E+P +
Sbjct: 85 IDLDAEDEVPPSIAA 99
>gi|428178017|gb|EKX46894.1| hypothetical protein GUITHDRAFT_152240 [Guillardia theta CCMP2712]
Length = 210
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 8/96 (8%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV LRDGR +G +RSFDQ+ NVVLE A ER +VG+ + D +GLYVIRGEN+VL+ E
Sbjct: 97 RVLVTLRDGRHFVGFMRSFDQYGNVVLEDAFERHVVGNSFADERMGLYVIRGENLVLLAE 156
Query: 61 LDLEKE-------ELPAHMTCVSTAEIKRAQKAEKD 89
LD+ KE E+P A +K +KAE +
Sbjct: 157 LDMHKEQNQPKLREVPLQTIMAQKAALKH-EKAEDE 191
>gi|410925290|ref|XP_003976114.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Takifugu
rubripes]
Length = 133
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+V ERI VG + DIP G++++RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DL+K + VS EI Q+ E+ A
Sbjct: 77 IDLDK-PCDTFLQQVSIEEILEEQRMEQQA 105
>gi|195429567|ref|XP_002062829.1| GK19486 [Drosophila willistoni]
gi|194158914|gb|EDW73815.1| GK19486 [Drosophila willistoni]
Length = 137
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQFAN+VL+ ERI VG+ Y DIP G+++IRGENVVL+GE
Sbjct: 20 KLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGE 79
Query: 61 LDLEKEE-LPAHMTCVSTAEI 80
+D +KE+ LP + +S EI
Sbjct: 80 IDRDKEQKLP--LKEISVDEI 98
>gi|398411868|ref|XP_003857268.1| hypothetical protein MYCGRDRAFT_32304 [Zymoseptoria tritici IPO323]
gi|339477153|gb|EGP92244.1| hypothetical protein MYCGRDRAFT_32304 [Zymoseptoria tritici IPO323]
Length = 132
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDL 63
V LRDGRKL+G+LRS+DQF N+VL+ ER V +LY DI GL+++RGENV+L+GE+DL
Sbjct: 18 VSLRDGRKLIGVLRSWDQFGNLVLQDTIERFFVKNLYADIERGLFLVRGENVLLLGEIDL 77
Query: 64 EKEE-LPAHMTCVSTAEIKRAQKAE-KDATVLKGSMRKRMEFLDFD 107
+K++ +PA + +KAE K+ S +K++ L F+
Sbjct: 78 DKDDYVPAPYEAAPVETVFAMKKAEDKENQKTNQSRQKKLAELGFE 123
>gi|226286851|gb|EEH42364.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 138
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 75/109 (68%), Gaps = 7/109 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+G ERI G L+ D+ G+Y++RGENV+L+GE
Sbjct: 26 KLVLVLRDGRKLIGVLRSWDQFANLVLQGTVERIYAGHLFADVQRGIYLVRGENVLLLGE 85
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRK--RMEFLDFD 107
+D ++P+ S E+ A K +D KG R+ +++ L F+
Sbjct: 86 ID----DIPSGYRQASYDEV-FALKKREDEQRKKGDKRRSNKLQALGFE 129
>gi|388582146|gb|EIM22452.1| RNA cap binding protein [Wallemia sebi CBS 633.66]
Length = 146
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 56/67 (83%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV LRDGRK++G+LRSFDQFAN+VL A ERI + Y DIP G+++IRGENVVL+GE
Sbjct: 20 KMLVALRDGRKIIGVLRSFDQFANLVLNDAVERIHALNEYADIPRGIFLIRGENVVLMGE 79
Query: 61 LDLEKEE 67
+DL+ E+
Sbjct: 80 VDLDTED 86
>gi|453089025|gb|EMF17065.1| Sm-like ribonucleo protein [Mycosphaerella populorum SO2202]
Length = 155
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V LRDGRKL+G+LRS+DQF N+VL+ ER+ V LY DI GL+++RGENV+L+GE
Sbjct: 38 KLMVALRDGRKLIGVLRSWDQFGNLVLQDTVERLFVHHLYADIERGLFLVRGENVLLLGE 97
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEK 88
+DL+K++ +P S ++ + +K E+
Sbjct: 98 IDLDKDDYVPEPFEQASAEKVFQLKKLEE 126
>gi|118794287|ref|XP_321407.3| AGAP001686-PA [Anopheles gambiae str. PEST]
gi|116116223|gb|EAA00900.3| AGAP001686-PA [Anopheles gambiae str. PEST]
Length = 134
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLL DGR L+G LRS DQFAN+VL ERI VG+ Y DI G+ +IRGENVVL+GE
Sbjct: 18 KLMVLLHDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVVIIRGENVVLLGE 77
Query: 61 LDLEKEE-LPAHMTCVSTAEIKRAQKAEKDA 90
+D EKE LP + +S +I AQ+ E++A
Sbjct: 78 IDREKESTLP--LREISVDDILDAQRREQEA 106
>gi|254281302|ref|NP_001156840.1| LSM1 homolog, U6 small nuclear RNA associated [Acyrthosiphon pisum]
Length = 135
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++VLLRDGR L+G LRS DQ+AN++L+ ERI VG + DIP G++++RGENVVL+GE
Sbjct: 18 KLMVLLRDGRTLIGYLRSVDQYANLLLQQTVERIHVGKKFGDIPRGVFLVRGENVVLLGE 77
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKG 95
+D KE VS +I QK E+DA + K
Sbjct: 78 IDALKEA-DQMFERVSIGDILALQKQEQDAKIEKA 111
>gi|301108017|ref|XP_002903090.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097462|gb|EEY55514.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 102
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 54/69 (78%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDL 63
++LRDGR L+G LRSFDQ++N++LE ER + G L+CDI LGL +IRG+N+VL+GELD
Sbjct: 1 MVLRDGRHLVGYLRSFDQYSNIILEDTYERHVAGGLFCDIELGLNIIRGDNIVLLGELDS 60
Query: 64 EKEELPAHM 72
+KE HM
Sbjct: 61 DKERDQPHM 69
>gi|392571535|gb|EIW64707.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 136
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVLLRDGRKL G+LRS+DQFAN+VLE ERI D++ ++ GL++IRGENVVL+GE
Sbjct: 20 KMLVLLRDGRKLQGVLRSYDQFANLVLEDTVERIYHQDVFAEMWRGLFLIRGENVVLLGE 79
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQ 84
+DL++E E+P S E Q
Sbjct: 80 IDLDQEDEVPLRQVEWSVLEAYHKQ 104
>gi|367035444|ref|XP_003667004.1| hypothetical protein MYCTH_57908 [Myceliophthora thermophila ATCC
42464]
gi|347014277|gb|AEO61759.1| hypothetical protein MYCTH_57908 [Myceliophthora thermophila ATCC
42464]
Length = 159
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 9/89 (10%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD---------LYCDIPLGLYVIR 51
K++V LRDGRKLLG+LRS+DQFAN+VL+ ERI V LY DI GL+++R
Sbjct: 33 KLMVALRDGRKLLGILRSWDQFANLVLQSTKERIFVAPGTVPNQPRGLYADIDRGLFLVR 92
Query: 52 GENVVLIGELDLEKEELPAHMTCVSTAEI 80
GENV+L+GE+DL+KE+ P ++ AE+
Sbjct: 93 GENVLLLGEIDLDKEDDPPAGYDLADAEL 121
>gi|154291173|ref|XP_001546172.1| hypothetical protein BC1G_15358 [Botryotinia fuckeliana B05.10]
gi|347441882|emb|CCD34803.1| hypothetical protein [Botryotinia fuckeliana]
Length = 181
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 20/114 (17%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD-------------LYCDIPLGL 47
K+++ LRDGRKL+G+LRS+DQFAN+VL+ ERI + LY DIP GL
Sbjct: 50 KLMISLRDGRKLIGILRSWDQFANIVLQSTIERIFIAPPPSSSPQGATQPGLYADIPRGL 109
Query: 48 YVIRGENVVLIGELDLEKEELPAHMTCVSTAEI-------KRAQKAEKDATVLK 94
+++RGENV+L+GE+DL+K++ + AE+ +RA +A++D L+
Sbjct: 110 FLVRGENVLLLGEIDLDKDDEAPPGYEKADAEVVNRLDKERRAMEAKRDKNRLR 163
>gi|402217673|gb|EJT97752.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 135
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+L++LRDGRKL+G+LRS+DQFAN+VLE + ERI G Y D+ G++VIRGENVVL+GE
Sbjct: 20 KVLIVLRDGRKLVGVLRSYDQFANLVLEDSYERIFHGLEYADVWKGVFVIRGENVVLLGE 79
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKDA 90
+DL+ E E+P + V +I AE +
Sbjct: 80 IDLDVEDEVP--LVQVPLQQILPLHNAENET 108
>gi|409051525|gb|EKM61001.1| hypothetical protein PHACADRAFT_247289 [Phanerochaete carnosa
HHB-10118-sp]
Length = 116
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+LV+LRDGRKL G+LRS+DQFAN+VLE ERI D+Y ++ GLY+IRGENVVL+GE+
Sbjct: 1 MLVVLRDGRKLHGVLRSYDQFANLVLEDTVERIYHQDVYAEMKRGLYLIRGENVVLLGEI 60
Query: 62 DLEKE-ELPAHMTCVSTAE 79
DL++E ++P T E
Sbjct: 61 DLDQEDDVPLKQVDWETLE 79
>gi|432874730|ref|XP_004072564.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Oryzias
latipes]
Length = 133
Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+V ERI VG + DIP G++++RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+DL+K + VS EI Q+ ++ A
Sbjct: 77 IDLDK-PCDTVLQQVSIEEILEEQRLQQQA 105
>gi|209733634|gb|ACI67686.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
gi|303661389|gb|ADM16038.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 133
Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+V ERI VG + DIP G++++RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+D++K + VS EI Q+ ++ A
Sbjct: 77 IDMDK-PCDTVLQQVSIEEILEEQRLQQQA 105
>gi|395334284|gb|EJF66660.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 136
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL G+LRS+DQFAN+VLE ERI D++ ++ GL++IRGENVVL+GE
Sbjct: 20 KMLVVLRDGRKLQGVLRSYDQFANLVLEDTVERIYHQDVFAEVWRGLFLIRGENVVLLGE 79
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQ 84
+DL++E E+P + E Q
Sbjct: 80 IDLDQEDEIPLRQVEWAVLEAYHKQ 104
>gi|443683303|gb|ELT87602.1| hypothetical protein CAPTEDRAFT_179858 [Capitella teleta]
Length = 136
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGR L+G LRS DQFAN+VL ERI VG + IP G+++IRGENVVL+GE
Sbjct: 19 KMLVVLRDGRTLIGFLRSIDQFANLVLHRTIERIHVGKKFGTIPHGIFLIRGENVVLLGE 78
Query: 61 LDLEKEE-LPAHMTCVSTA-EIKRAQK 85
+DLE E+ LP + E++R Q+
Sbjct: 79 IDLENEDKLPLEEVPIEEILELQRNQQ 105
>gi|393247771|gb|EJD55278.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 136
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 8/101 (7%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G+LRS+DQFAN+VLE ER G Y ++ G+++IRGENVVL+GE
Sbjct: 20 KMLVVLRDGRKLVGVLRSYDQFANLVLEDTIERFYHGQNYGEVRRGVFLIRGENVVLLGE 79
Query: 61 LDLEKEE------LPAHMTC-VSTAEI-KRAQKAEKDATVL 93
+DL+ E+ +P +M V E KR Q+ AT+L
Sbjct: 80 IDLDVEDQVPLQVVPQNMIAPVHKEEFEKRKQRDATKATIL 120
>gi|167520007|ref|XP_001744343.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777429|gb|EDQ91046.1| predicted protein [Monosiga brevicollis MX1]
Length = 126
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++ +LRDGRKL+G LRS DQFAN+VL+ ER VG+ Y D+P+G+Y+IRGENV L+GE
Sbjct: 23 KLICVLRDGRKLIGYLRSVDQFANLVLQDTVERYYVGNEYGDVPVGIYIIRGENVALLGE 82
Query: 61 LDLEKEE 67
+D ++
Sbjct: 83 MDASADQ 89
>gi|209734138|gb|ACI67938.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 132
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+V ERI VG + DIP G++++RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGE 76
Query: 61 LDLEK--EELPAHMTCVSTAEIKRAQKAEKDAT 91
+D++K + + ++ E +R Q+ K T
Sbjct: 77 MDIDKLCDNVLQQVSIEEILEEQRLQQQAKQKT 109
>gi|344303572|gb|EGW33821.1| hypothetical protein SPAPADRAFT_54105 [Spathaspora passalidarum
NRRL Y-27907]
Length = 166
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
KI VLLRDGR L G+LR+FDQFAN+VL+ ERI + D + ++ G++++RGENVV++GE
Sbjct: 49 KIFVLLRDGRNLFGILRTFDQFANLVLQDTYERIYLDDKFAEVYRGVFMVRGENVVMMGE 108
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQ 84
LD+++E+ H+ + + + A+
Sbjct: 109 LDIDRED--DHLEVMQQIDFREAE 130
>gi|387915626|gb|AFK11422.1| u6 snRNA-associated Sm-like protein LSm1-like protein
[Callorhinchus milii]
Length = 133
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 52/66 (78%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LV+LRDGR L+G LRS DQFAN+VL E I VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVVLRDGRTLIGYLRSVDQFANLVLHQTVEGIHVGRKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 LDLEKE 66
+DLE+E
Sbjct: 77 IDLERE 82
>gi|389751358|gb|EIM92431.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 136
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDG+KL G+LRS+DQFAN+VLE ERI + Y D +GLY+IRGENVVL+GE
Sbjct: 20 KMLVILRDGKKLHGVLRSYDQFANLVLEETIERIYSKNHYADKYVGLYLIRGENVVLLGE 79
Query: 61 LDL-EKEELP 69
+DL E++E+P
Sbjct: 80 IDLDEEDEIP 89
>gi|302695391|ref|XP_003037374.1| hypothetical protein SCHCODRAFT_64638 [Schizophyllum commune
H4-8]
gi|300111071|gb|EFJ02472.1| hypothetical protein SCHCODRAFT_64638 [Schizophyllum commune
H4-8]
Length = 136
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 58/67 (86%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G+LRS+DQFAN+VLE E+I +L+ + +GL++IRGENVVL+GE
Sbjct: 20 KMLVVLRDGRKLVGVLRSYDQFANLVLEDTWEKIYHSNLWAEKHVGLFLIRGENVVLMGE 79
Query: 61 LDLEKEE 67
+DL++E+
Sbjct: 80 IDLDRED 86
>gi|209733674|gb|ACI67706.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 133
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+V ERI VG + DIP G++++RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGE 76
Query: 61 LDLEK--EELPAHMTCVSTAEIKRAQKAEKDAT 91
+D++K + + ++ E +R Q+ K T
Sbjct: 77 IDIDKLCDNVLQQVSIEEILEEQRLQQQAKQKT 109
>gi|348516098|ref|XP_003445576.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Oreochromis niloticus]
Length = 133
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+V ERI VG + DIP G++++RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+D++K + VS EI Q+ ++ A
Sbjct: 77 IDMDK-PCDTVLQQVSIEEILEEQRLQQQA 105
>gi|196009920|ref|XP_002114825.1| hypothetical protein TRIADDRAFT_58702 [Trichoplax adhaerens]
gi|190582887|gb|EDV22959.1| hypothetical protein TRIADDRAFT_58702 [Trichoplax adhaerens]
Length = 137
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++L+DGR L+G LRS DQFAN+VL+ ERI VG Y DIP GL+VIRG+NV ++GE
Sbjct: 21 KLMIVLKDGRTLIGFLRSVDQFANLVLQDTIERIHVGKQYGDIPRGLFVIRGDNVAILGE 80
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAE 87
+D +K++L + VS +I AQ+ +
Sbjct: 81 MD-DKKDL-TQLQKVSIEDILDAQREQ 105
>gi|213410363|ref|XP_002175951.1| mRNA decapping complex subunit [Schizosaccharomyces japonicus
yFS275]
gi|212003998|gb|EEB09658.1| mRNA decapping complex subunit [Schizosaccharomyces japonicus
yFS275]
Length = 140
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 56/66 (84%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V+LRDG+KL+G+LRSFDQFAN++L+ ER+ +Y DI G+Y++RGENVVL+GE
Sbjct: 23 KVIVILRDGKKLIGILRSFDQFANLMLQCTIERLYEDGMYGDIERGVYIVRGENVVLLGE 82
Query: 61 LDLEKE 66
+DLE+E
Sbjct: 83 IDLERE 88
>gi|170083973|ref|XP_001873210.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650762|gb|EDR15002.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 136
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 66/90 (73%), Gaps = 3/90 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL G+LRS+DQFAN+VLE ERI G+ + + GL++IRGENVVL+GE
Sbjct: 20 KMLVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFAENWHGLFLIRGENVVLLGE 79
Query: 61 LDLEKE-ELPAHMTCVSTAEIKRAQKAEKD 89
+DL++E ++P +T V ++ K + D
Sbjct: 80 IDLDREDDIP--LTQVDYHLLEPYHKQDAD 107
>gi|403415254|emb|CCM01954.1| predicted protein [Fibroporia radiculosa]
Length = 116
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+LV+LRDGRKL G+LRS+DQFAN+VLE ERI D++ ++ GL++IRGENVVL+GE+
Sbjct: 1 MLVVLRDGRKLQGVLRSYDQFANLVLEDTVERIFCQDVFAEVWRGLFLIRGENVVLLGEV 60
Query: 62 DLEKE-ELPAHMTCVSTAEIKRAQK 85
DL++E ++P E +Q+
Sbjct: 61 DLDQEDDVPLRQVAWDELEPYHSQE 85
>gi|326436185|gb|EGD81755.1| hypothetical protein PTSG_02467 [Salpingoeca sp. ATCC 50818]
Length = 132
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
++ +LRDGRKL+G LR+ DQFAN+V + A ERI V D Y DI G+ ++RGENVVL+GEL
Sbjct: 19 LICVLRDGRKLIGYLRTVDQFANLVFQDAVERIYVDDYYGDIQQGIVIVRGENVVLLGEL 78
Query: 62 DLEKEELPAHMTCVSTAEI 80
D E + + +T VS A+I
Sbjct: 79 DAESAQ-NSKLTRVSAADI 96
>gi|392597347|gb|EIW86669.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 136
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL G+LRS+DQFAN+VLE ERI G+ + + GL++IRGENVVL+GE
Sbjct: 20 KMLVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFAEHWHGLFLIRGENVVLLGE 79
Query: 61 LDLEKEE 67
+DL++E+
Sbjct: 80 VDLDQED 86
>gi|209737588|gb|ACI69663.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 168
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+V ERI VG + DIP G++++RGE+VVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGESVVLLGE 76
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+D++K + VS EI Q+ ++ A
Sbjct: 77 IDMDK-PCDTVLQQVSIEEILEEQRLQQQA 105
>gi|290987543|ref|XP_002676482.1| predicted protein [Naegleria gruberi]
gi|284090084|gb|EFC43738.1| predicted protein [Naegleria gruberi]
Length = 150
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 52/62 (83%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V+LRDG+KL+G+LR +DQF N+ LE ERI+V D Y D+ +GLY++RGENVVL+GE
Sbjct: 32 KVMVILRDGKKLIGILRCYDQFVNMTLEKTVERIVVEDKYGDLDVGLYIVRGENVVLMGE 91
Query: 61 LD 62
+D
Sbjct: 92 VD 93
>gi|365983954|ref|XP_003668810.1| hypothetical protein NDAI_0B05340 [Naumovozyma dairenensis CBS 421]
gi|343767577|emb|CCD23567.1| hypothetical protein NDAI_0B05340 [Naumovozyma dairenensis CBS 421]
Length = 183
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + + Y + LG+++IRGENVV++
Sbjct: 64 KIFVLLRDGRLLFGVLRTFDQYANLILQHCVERIYLSEENKYAEQELGIFMIRGENVVML 123
Query: 59 GELDLEKEELPAHMTCVSTAEIKRAQKAEK--DATVLKGSMRKRMEFLDF 106
GE+D++KE+ P + + K A K +K D K +K E+ F
Sbjct: 124 GEVDIDKEDQP--LELMERISFKDASKIKKNNDEKKFKSETKKGKEYARF 171
>gi|452847377|gb|EME49309.1| hypothetical protein DOTSEDRAFT_68172 [Dothistroma septosporum
NZE10]
Length = 164
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEK 65
LRDGRKL+G+LRS+DQF N+VL+ ER+ V +LY DI GL+++RGENV+L+GE+DL+K
Sbjct: 52 LRDGRKLIGVLRSWDQFGNLVLQDTVERLFVQNLYADIERGLFLVRGENVLLLGEIDLDK 111
Query: 66 EE-LPAHMTCVSTAEIKRAQKAEK 88
++ +P + ++ +K E
Sbjct: 112 DDYVPPAFELAAVEKVFALKKQEN 135
>gi|403164177|ref|XP_003324247.2| hypothetical protein PGTG_05053 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164920|gb|EFP79828.2| hypothetical protein PGTG_05053 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 142
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 72/104 (69%), Gaps = 11/104 (10%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL-YCDIPLGLYVIRGENVVLIG 59
KILV LRDG+KL+G+LRS+DQFAN+VL+ ERI G Y DI G+Y++RGENVVL+G
Sbjct: 23 KILVSLRDGKKLIGVLRSYDQFANLVLQDTIERIHDGICKYTDIWRGIYLVRGENVVLLG 82
Query: 60 ELDLEKEE-----LPAH----MTCVSTAEIK-RAQKAEKDATVL 93
E+DL+KE+ H ++ + EI+ +A++ +KD +L
Sbjct: 83 EIDLDKEDEIIKRFEYHSLETVSELQQQEIQTKAERVKKDEKIL 126
>gi|313213235|emb|CBY37078.1| unnamed protein product [Oikopleura dioica]
gi|313227656|emb|CBY22803.1| unnamed protein product [Oikopleura dioica]
Length = 135
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LV+LRDGR L+G+LR+ DQFAN+VL ERI V + DIP G++V+RGENV L GE
Sbjct: 18 KHLVVLRDGRTLIGILRAIDQFANLVLHQTVERIHVDGFFGDIPRGIFVVRGENVALFGE 77
Query: 61 LDLEKEELPAHMTCVSTAEI 80
+DLE E ++ VS EI
Sbjct: 78 VDLENENR-GNLQEVSVEEI 96
>gi|403294428|ref|XP_003938189.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Saimiri
boliviensis boliviensis]
Length = 102
Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 48/61 (78%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K LVLLRDGR L+G LRS DQFAN+VL ERI VG Y DIP G++V+RGENVVL+GE
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGE 76
Query: 61 L 61
+
Sbjct: 77 I 77
>gi|241999432|ref|XP_002434359.1| clathrin heavy chain, putative [Ixodes scapularis]
gi|215497689|gb|EEC07183.1| clathrin heavy chain, putative [Ixodes scapularis]
Length = 459
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDL 63
V LRDGR L+G LRS DQFAN+VL ERI V Y DIP G++V+RG+NVVL+GE+D
Sbjct: 22 VFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEID- 80
Query: 64 EKEELPAHMTCVSTAEIKRAQKAEKDA 90
E +E + VS +I Q+ E +A
Sbjct: 81 EAKERDVDLEEVSVEQILEVQRLEAEA 107
>gi|328856685|gb|EGG05805.1| hypothetical protein MELLADRAFT_36483 [Melampsora larici-populina
98AG31]
Length = 152
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 74/119 (62%), Gaps = 15/119 (12%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG-----------DLYCDIPLGLYV 49
KILV LRDGR L+G+LRS+DQFAN+VL+ A ERI VG Y DI G+Y+
Sbjct: 23 KILVSLRDGRSLIGVLRSYDQFANLVLQDAIERIHVGVGVGKDEERKTGQYADIWRGIYL 82
Query: 50 IRGENVVLIGELDLEKE-ELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
+RGENVVL+GE+DL++E E+ + E+ QK+E+ V + M K E + FD
Sbjct: 83 VRGENVVLLGEIDLDREDEVIERCEQLPIEEVINLQKSEQ---VTRLEMIKSKEKILFD 138
>gi|299755579|ref|XP_001828752.2| hypothetical protein CC1G_06738 [Coprinopsis cinerea
okayama7#130]
gi|298411289|gb|EAU93018.2| hypothetical protein CC1G_06738 [Coprinopsis cinerea
okayama7#130]
Length = 116
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+LV+LRDGRKL G+LRS+DQFAN+VLE ERI +++ + GL++IRGENVVL+GE+
Sbjct: 1 MLVVLRDGRKLHGVLRSYDQFANLVLEDTYERIYHRNMFAEQHHGLFLIRGENVVLMGEI 60
Query: 62 DLEKEE 67
DL+KE+
Sbjct: 61 DLDKED 66
>gi|340385838|ref|XP_003391415.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Amphimedon queenslandica]
Length = 151
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+ILV+LR GR L+G LRS DQFAN++L+ ERI VG Y DIP G++++RGEN+VL GE
Sbjct: 34 RILVVLRGGRTLIGYLRSIDQFANLLLQDTVERIHVGKKYGDIPRGIFLVRGENMVLCGE 93
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKD 89
++ EE + VS EI AQ+ E +
Sbjct: 94 IEKSLEE-SMELEKVSIEEIIEAQRQENE 121
>gi|358396059|gb|EHK45446.1| hypothetical protein TRIATDRAFT_79595 [Trichoderma atroviride IMI
206040]
Length = 168
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%), Gaps = 11/78 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG-----------DLYCDIPLGLYV 49
K++V+LRDGRKL+G+LRS+DQFAN+VL+ ERI Y DIP G+++
Sbjct: 40 KLMVVLRDGRKLIGVLRSWDQFANIVLQSTTERIFAPRADNHDAQQPYGYYADIPHGIFL 99
Query: 50 IRGENVVLIGELDLEKEE 67
+RGENV+L+GE+DL+K++
Sbjct: 100 VRGENVLLLGEIDLDKDD 117
>gi|302502174|ref|XP_003013078.1| small nuclear ribonucleoprotein Lsm8, putative [Arthroderma
benhamiae CBS 112371]
gi|291176640|gb|EFE32438.1| small nuclear ribonucleoprotein Lsm8, putative [Arthroderma
benhamiae CBS 112371]
Length = 221
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 53/61 (86%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ +LY DIP G++++RGENV+L+GE
Sbjct: 84 KLVLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAENLYADIPRGVFLVRGENVLLLGE 143
Query: 61 L 61
+
Sbjct: 144 I 144
>gi|341888884|gb|EGT44819.1| CBN-LSM-1 protein [Caenorhabditis brenneri]
Length = 125
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G LRS DQFAN++LE ER V +C+ G +IRGENV L GE
Sbjct: 21 KLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETSQGFMLIRGENVELAGE 80
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQ 84
+D + +P +T VS E +R +
Sbjct: 81 ID---DSIPNGLTQVSPEEFRRIE 101
>gi|308510334|ref|XP_003117350.1| CRE-LSM-1 protein [Caenorhabditis remanei]
gi|308242264|gb|EFO86216.1| CRE-LSM-1 protein [Caenorhabditis remanei]
Length = 125
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G LRS DQFAN++LE ER V +C+ G +IRGENV L GE
Sbjct: 21 KLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETGQGFMLIRGENVELAGE 80
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQ 84
+D + +P +T VS E +R +
Sbjct: 81 ID---DSIPTGLTQVSPEEFRRIE 101
>gi|302661794|ref|XP_003022560.1| small nuclear ribonucleoprotein Lsm8, putative [Trichophyton
verrucosum HKI 0517]
gi|291186512|gb|EFE41942.1| small nuclear ribonucleoprotein Lsm8, putative [Trichophyton
verrucosum HKI 0517]
Length = 221
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 53/61 (86%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++++LRDGRKL+G+LRS+DQFAN+VL+ ER+ +LY DIP G++++RGENV+L+GE
Sbjct: 84 KLVLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAENLYADIPRGVFLVRGENVLLLGE 143
Query: 61 L 61
+
Sbjct: 144 I 144
>gi|340376043|ref|XP_003386543.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Amphimedon queenslandica]
Length = 151
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+ILV+LR GR L+G LRS DQFAN++L+ ERI VG Y DIP G++++RGEN+VL GE
Sbjct: 34 RILVVLRGGRTLIGYLRSIDQFANLLLQDTVERIHVGKKYGDIPRGIFLVRGENMVLCGE 93
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEK 88
++ EE + VS EI AQ+ E
Sbjct: 94 IEKSLEE-SMELEKVSIEEIIEAQRQEN 120
>gi|442751753|gb|JAA68036.1| Putative u6 snrna-associated sm-like protein lsm1 [Ixodes ricinus]
Length = 145
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDL 63
V LRDGR L+G LRS DQFAN+VL ERI V Y DIP G++V+RG+NVVL+GE+D
Sbjct: 32 VFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEID- 90
Query: 64 EKEELPAHMTCVSTAEIKRAQKAEKDA 90
E +E + VS +I Q+ E +A
Sbjct: 91 EAKERDVDLEEVSVEQILEVQRLEAEA 117
>gi|336376345|gb|EGO04680.1| hypothetical protein SERLA73DRAFT_173904 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389388|gb|EGO30531.1| hypothetical protein SERLADRAFT_454838 [Serpula lacrymans var.
lacrymans S7.9]
Length = 136
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL G+LRS+DQFAN+VLE ER+ + + + G++VIRGENVVL+GE
Sbjct: 20 KMLVILRDGRKLHGVLRSYDQFANLVLEDTVERLYHENTFAENWHGIFVIRGENVVLLGE 79
Query: 61 LDLEKEE 67
+DL+KE+
Sbjct: 80 IDLDKED 86
>gi|401883959|gb|EJT48139.1| RNA cap binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 147
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G+LRS+DQFAN +LE ER+ G + DI +G+ +IRGENVV +GE
Sbjct: 20 KVLVVLRDGRKLIGVLRSYDQFANFLLESTVERLYNGFEFADIDIGVLLIRGENVVALGE 79
Query: 61 LDL-EKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRME 102
+DL ++E+P + K A+ V K + +KR E
Sbjct: 80 IDLIAEDEIPLRQIPLDEMRAKLAEVEVSFRVVKKLTGKKRRE 122
>gi|260949273|ref|XP_002618933.1| hypothetical protein CLUG_00092 [Clavispora lusitaniae ATCC 42720]
gi|238846505|gb|EEQ35969.1| hypothetical protein CLUG_00092 [Clavispora lusitaniae ATCC 42720]
Length = 149
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 65/95 (68%), Gaps = 9/95 (9%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL-------YCDIPLGLYVIRGE 53
KI VLLRDGR + G+LR+FDQFAN+VL+ ERI + L + ++P G++++RGE
Sbjct: 25 KIFVLLRDGRNMSGILRTFDQFANLVLQDTFERIYLPKLDQNSPVRFAEVPRGVFMVRGE 84
Query: 54 NVVLIGELDLEKEELPAHMTCVSTAEIKRAQKAEK 88
NVV++GELD+++E+ H+ + ++A+K K
Sbjct: 85 NVVMLGELDIDRED--DHLAEMQQIPFEQAEKEWK 117
>gi|268532098|ref|XP_002631177.1| C. briggsae CBR-LSM-1 protein [Caenorhabditis briggsae]
Length = 125
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G LRS DQFAN++LE ER V +C+ G +IRGENV L GE
Sbjct: 21 KLLVVLRDGRKLIGYLRSIDQFANLILEDVVERTFVEKYFCETGQGFMLIRGENVELAGE 80
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQ 84
+D + +P +T VS E +R +
Sbjct: 81 ID---DSIPTGLTQVSPEEFRRIE 101
>gi|255716374|ref|XP_002554468.1| KLTH0F06028p [Lachancea thermotolerans]
gi|238935851|emb|CAR24031.1| KLTH0F06028p [Lachancea thermotolerans CBS 6340]
Length = 160
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + + Y + G++++RGENVV++
Sbjct: 41 KIFVLLRDGRMLFGILRTFDQYANLILQHCVERIYITEENKYAECGRGVFMVRGENVVML 100
Query: 59 GELDLEKEELP-AHMTCVSTAEIKRAQKAEKDA 90
GE+D+++E+ P + M +S E +K DA
Sbjct: 101 GEVDIDREDQPLSQMERISFEEASAVKKQRDDA 133
>gi|170578282|ref|XP_001894349.1| U6 snRNA-associated Sm-like protein LSm [Brugia malayi]
gi|158599116|gb|EDP36811.1| U6 snRNA-associated Sm-like protein LSm, putative [Brugia malayi]
gi|402591550|gb|EJW85479.1| LSM1 protein [Wuchereria bancrofti]
Length = 139
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGR L+G LR+ DQFAN+VL ERI V + Y DI G+++IRGENVVL GE
Sbjct: 21 KLLVVLRDGRTLIGYLRTIDQFANLVLHETLERIHVDNYYGDIERGVFLIRGENVVLAGE 80
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQK 85
+D KE+L + + +S EI Q+
Sbjct: 81 IDETKEQL-SGLIPLSAKEILSLQQ 104
>gi|391341680|ref|XP_003745155.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Metaseiulus occidentalis]
Length = 166
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 8/113 (7%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
++VLLRDGR L+G+LRS DQFAN+VL ERI VG Y DIP G++++RGENVVL+GE
Sbjct: 48 LMVLLRDGRVLIGILRSIDQFANLVLHRTIERIHVGKKYGDIPRGVFIVRGENVVLLGEY 107
Query: 62 DLEKEELPAHMTCVSTAEI-------KRAQKAEKDATVLKGSMRKRMEFLDFD 107
+ +E L + V EI RA+K ++D + R +++ FD
Sbjct: 108 EESREGLVG-LQKVGIDEIIEIQREDLRAKKDQEDRRIRTLRERGLLQYSLFD 159
>gi|440632690|gb|ELR02609.1| hypothetical protein GMDG_05572 [Geomyces destructans 20631-21]
Length = 185
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 61/85 (71%), Gaps = 4/85 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL---YCDIPLGLYVIRGENVVL 57
K++V LRDGRKL+G+LRS+DQFAN+VL+ ER+ + D+P G +++RGENV+L
Sbjct: 66 KLMVALRDGRKLIGVLRSWDQFANLVLQSTSERLFTHSPPLQFADVPQGTFLVRGENVLL 125
Query: 58 IGELDLEK-EELPAHMTCVSTAEIK 81
+GE+DL+K +++P AE++
Sbjct: 126 LGEVDLDKDDDVPVGFERGDVAEVQ 150
>gi|448525435|ref|XP_003869115.1| Lsm1 protein [Candida orthopsilosis Co 90-125]
gi|380353468|emb|CCG22978.1| Lsm1 protein [Candida orthopsilosis]
Length = 162
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV---GDLYCDIPLGLYVIRGENVVL 57
KI VLLRDGR G+LR+FDQFAN+VL+ ERI V + +I G++++RGENVV+
Sbjct: 42 KIFVLLRDGRNFFGILRTFDQFANLVLQDTFERIYVEGEPKKFGEIYRGVFIVRGENVVM 101
Query: 58 IGELDLEKEELPAHMTCVSTAEIKRAQKAEK 88
+GELD+++E+ H+ + ++A++ +K
Sbjct: 102 MGELDIDRED--DHLETLQQIPFEQAEQEQK 130
>gi|221482497|gb|EEE20845.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 335
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 50/62 (80%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G LR+FDQF N+VLEG +R++V + Y D+ LG ++RG+N++L G
Sbjct: 229 KLLVVLRDGRKLIGYLRTFDQFGNLVLEGTVQRMVVDNAYADLYLGCMIVRGDNMILFGA 288
Query: 61 LD 62
+D
Sbjct: 289 VD 290
>gi|340515572|gb|EGR45825.1| predicted protein [Trichoderma reesei QM6a]
Length = 174
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 57/78 (73%), Gaps = 11/78 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG-----------DLYCDIPLGLYV 49
K++V+LRDGRKL+G+LRS+DQFAN+VL+ ERI + DIP G+++
Sbjct: 46 KLMVVLRDGRKLIGVLRSWDQFANIVLQSTTERIFAPRPDNPRSEYPYGYFADIPHGIFL 105
Query: 50 IRGENVVLIGELDLEKEE 67
+RGENV+L+GE+DL+K++
Sbjct: 106 VRGENVLLLGEIDLDKDD 123
>gi|190344900|gb|EDK36679.2| hypothetical protein PGUG_00777 [Meyerozyma guilliermondii ATCC
6260]
Length = 157
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 55/76 (72%), Gaps = 9/76 (11%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD---------LYCDIPLGLYVIR 51
KI VL+RDGRKL G+LR+FDQFAN+VL+ A ERI + D Y + G+++IR
Sbjct: 31 KIFVLMRDGRKLFGILRTFDQFANLVLQDAVERIYLNDENDDNSSPQRYSEAYRGVFMIR 90
Query: 52 GENVVLIGELDLEKEE 67
GENVV++GELD++ E+
Sbjct: 91 GENVVMMGELDIDTED 106
>gi|221504537|gb|EEE30210.1| lsm1, putative [Toxoplasma gondii VEG]
Length = 335
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 50/62 (80%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G LR+FDQF N+VLEG +R++V + Y D+ LG ++RG+N++L G
Sbjct: 229 KLLVVLRDGRKLIGYLRTFDQFGNLVLEGTVQRMVVDNAYADLYLGCMIVRGDNMILFGA 288
Query: 61 LD 62
+D
Sbjct: 289 VD 290
>gi|323447461|gb|EGB03380.1| hypothetical protein AURANDRAFT_72740 [Aureococcus anophagefferens]
Length = 129
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 7/78 (8%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACE-RIIVGD------LYCDIPLGLYVIRGE 53
K+L++LRDGR L+G++RSFDQF+NVVLE E R+++ D +Y D+PLGLYVIRG+
Sbjct: 23 KVLIILRDGRNLVGVMRSFDQFSNVVLEDTYERRVVIPDDESQPAVYGDVPLGLYVIRGD 82
Query: 54 NVVLIGELDLEKEELPAH 71
+VVL+GE+ E E H
Sbjct: 83 SVVLLGEVAEELEASEDH 100
>gi|146422932|ref|XP_001487400.1| hypothetical protein PGUG_00777 [Meyerozyma guilliermondii ATCC
6260]
Length = 157
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 55/76 (72%), Gaps = 9/76 (11%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD---------LYCDIPLGLYVIR 51
KI VL+RDGRKL G+LR+FDQFAN+VL+ A ERI + D Y + G+++IR
Sbjct: 31 KIFVLMRDGRKLFGILRTFDQFANLVLQDAVERIYLNDENDDNLSPQRYSEAYRGVFMIR 90
Query: 52 GENVVLIGELDLEKEE 67
GENVV++GELD++ E+
Sbjct: 91 GENVVMMGELDIDTED 106
>gi|237841501|ref|XP_002370048.1| U6 snRNA-associated Sm-like protein LSm1, putative [Toxoplasma
gondii ME49]
gi|211967712|gb|EEB02908.1| U6 snRNA-associated Sm-like protein LSm1, putative [Toxoplasma
gondii ME49]
Length = 335
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 50/62 (80%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G LR+FDQF N+VLEG +R++V + Y D+ LG ++RG+N++L G
Sbjct: 229 KLLVVLRDGRKLIGYLRTFDQFGNLVLEGTVQRMVVDNAYADLYLGCMIVRGDNMILFGA 288
Query: 61 LD 62
+D
Sbjct: 289 VD 290
>gi|410081531|ref|XP_003958345.1| hypothetical protein KAFR_0G01760 [Kazachstania africana CBS 2517]
gi|372464933|emb|CCF59210.1| hypothetical protein KAFR_0G01760 [Kazachstania africana CBS 2517]
Length = 180
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--LYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + D Y + G+++IRGENVV++
Sbjct: 61 KIFVLLRDGRLLFGVLRTFDQYANLILQHCVERIYLTDENKYAEEDRGVFMIRGENVVML 120
Query: 59 GELDLEKEELPAHMTCVSTAEIKRAQ--KAEKDATVLKGSMRK 99
GE+D++KE+ P + + + + A+ K DA K K
Sbjct: 121 GEVDIDKEDQP--LELMESIPFREAEMIKKTNDAARFKSETHK 161
>gi|406696065|gb|EKC99361.1| RNA cap binding protein [Trichosporon asahii var. asahii CBS 8904]
Length = 113
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G+LRS+DQFAN +LE ER+ G + DI +G+ +IRGENVV +GE
Sbjct: 20 KVLVVLRDGRKLIGVLRSYDQFANFLLESTVERLYNGFEFADIDIGVLLIRGENVVALGE 79
Query: 61 LDL-EKEELPAHMTCVSTAEIKRAQ 84
+DL ++E+P + K A+
Sbjct: 80 IDLIAEDEIPLRQIPLDEMRAKLAE 104
>gi|116204657|ref|XP_001228139.1| hypothetical protein CHGG_10212 [Chaetomium globosum CBS 148.51]
gi|88176340|gb|EAQ83808.1| hypothetical protein CHGG_10212 [Chaetomium globosum CBS 148.51]
Length = 182
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 57/76 (75%), Gaps = 9/76 (11%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD---------LYCDIPLGLYVIR 51
K+++ LRDGRKL+G+LRS+DQFAN+VL+ ERI V LY D+ GL+++R
Sbjct: 56 KLMLALRDGRKLVGILRSWDQFANLVLQSTKERIFVPPGTAPDQVRGLYADVDRGLFLVR 115
Query: 52 GENVVLIGELDLEKEE 67
GENV+L+GE+DL+KE+
Sbjct: 116 GENVLLLGEIDLDKED 131
>gi|320585919|gb|EFW98598.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 182
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 19/90 (21%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD-----------------LYCDI 43
K++V+LRDGRK++G+LR++DQFAN++L+ A ER + LY DI
Sbjct: 48 KLMVVLRDGRKVIGVLRTWDQFANLILQNAIERTFLAPGTFEAAAAPESAAQGHGLYADI 107
Query: 44 PLGLYVIRGENVVLIGELDLEK--EELPAH 71
P G Y++RGENV+L+GE+DL++ E P H
Sbjct: 108 PRGTYLVRGENVLLLGEIDLDRDDEAPPGH 137
>gi|6322337|ref|NP_012411.1| Lsm1p [Saccharomyces cerevisiae S288c]
gi|1353009|sp|P47017.1|LSM1_YEAST RecName: Full=Sm-like protein LSm1; AltName: Full=SPB8 protein
gi|1008320|emb|CAA89419.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270504|gb|AAS56633.1| YJL124C [Saccharomyces cerevisiae]
gi|151945004|gb|EDN63259.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190409383|gb|EDV12648.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|256272133|gb|EEU07133.1| Lsm1p [Saccharomyces cerevisiae JAY291]
gi|285812780|tpg|DAA08678.1| TPA: Lsm1p [Saccharomyces cerevisiae S288c]
gi|323304441|gb|EGA58212.1| Lsm1p [Saccharomyces cerevisiae FostersB]
gi|349579079|dbj|GAA24242.1| K7_Lsm1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298642|gb|EIW09739.1| Lsm1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 172
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + Y + G+++IRGENVV++
Sbjct: 53 KIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVML 112
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 113 GEVDIDKEDQP 123
>gi|254571117|ref|XP_002492668.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|238032466|emb|CAY70489.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|328353325|emb|CCA39723.1| Sm-like protein LSm1 [Komagataella pastoris CBS 7435]
Length = 157
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG-DLYCDIPLGLYVIRGENVVLIGE 60
+ V LR+GR +G+LR+FDQFAN+VL+ ERI +G D Y + P G+++IRGENV L+GE
Sbjct: 46 VTVTLREGRVFIGILRTFDQFANLVLQDTVERIYIGDDKYAEAPQGVFLIRGENVSLVGE 105
Query: 61 LDLEKEE 67
+DL++++
Sbjct: 106 IDLDQQD 112
>gi|389638316|ref|XP_003716791.1| hypothetical protein MGG_03195 [Magnaporthe oryzae 70-15]
gi|351642610|gb|EHA50472.1| hypothetical protein MGG_03195 [Magnaporthe oryzae 70-15]
Length = 176
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 73/118 (61%), Gaps = 18/118 (15%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--------LYCDIPLGLYVIRGENV 55
+ LRDGRKL G+LRS+DQFAN+VL+ ER+ V LY DI GL+++RGENV
Sbjct: 54 IALRDGRKLTGVLRSWDQFANLVLQSTVERLFVPPSPSTGERGLYADISRGLFLVRGENV 113
Query: 56 VLIGELDLEKEELPAHMTCVSTAEIK------RAQKAEKDATVLKGSMRKRMEFLDFD 107
+L+GE+DL+K++ P AE++ +A+KAE A + S K++ L F+
Sbjct: 114 LLLGEIDLDKDDDPP--AGYDKAELQVVESLLKARKAEDKAK--EKSRLKKLASLGFE 167
>gi|401625161|gb|EJS43183.1| lsm1p [Saccharomyces arboricola H-6]
Length = 172
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + Y + G+++IRGENVV++
Sbjct: 53 KIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEERGIFMIRGENVVML 112
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 113 GEVDIDKEDQP 123
>gi|290771110|emb|CAY80661.2| Lsm1p [Saccharomyces cerevisiae EC1118]
gi|323347940|gb|EGA82199.1| Lsm1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764929|gb|EHN06447.1| Lsm1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 172
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI+VLLRDGR L G+LR+FDQ+AN++L+ ERI + Y + G+++IRGENVV++
Sbjct: 53 KIVVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVML 112
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 113 GEVDIDKEDQP 123
>gi|367017368|ref|XP_003683182.1| hypothetical protein TDEL_0H01120 [Torulaspora delbrueckii]
gi|359750846|emb|CCE93971.1| hypothetical protein TDEL_0H01120 [Torulaspora delbrueckii]
Length = 165
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV--GDLYCDIPLGLYVIRGENVVLI 58
KI VLLRDG+ L G+LR+FDQ+ANV+LE ERI V + Y + GL+++RGENVV++
Sbjct: 46 KIFVLLRDGKMLFGVLRTFDQYANVILEHCVERIYVPESNQYAEETRGLFMVRGENVVML 105
Query: 59 GELDLEKEELP 69
GE+D+++E+ P
Sbjct: 106 GEVDIDREDGP 116
>gi|365760012|gb|EHN01761.1| Lsm1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401839808|gb|EJT42849.1| LSM1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 172
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + Y + G+++IRGENVV++
Sbjct: 53 KIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVML 112
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 113 GEVDIDKEDQP 123
>gi|346324590|gb|EGX94187.1| small nuclear ribonucleoprotein (LSM1), putative [Cordyceps
militaris CM01]
Length = 178
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 59/86 (68%), Gaps = 17/86 (19%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-----------------GDLYCDI 43
K++V+LRDGRKL+G+LRS+DQFAN+VL+ ER+ LY DI
Sbjct: 43 KLMVVLRDGRKLVGVLRSWDQFANIVLQSTTERLFALQPPQPSDAAPSDTAPPRGLYADI 102
Query: 44 PLGLYVIRGENVVLIGELDLEKEELP 69
G++++RGENV+L+GE+DL++++LP
Sbjct: 103 LHGIFLVRGENVLLLGEMDLDRDDLP 128
>gi|323308589|gb|EGA61833.1| Lsm1p [Saccharomyces cerevisiae FostersO]
Length = 143
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + Y + G+++IRGENVV++
Sbjct: 53 KIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVML 112
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 113 GEVDIDKEDQP 123
>gi|366990971|ref|XP_003675253.1| hypothetical protein NCAS_0B07980 [Naumovozyma castellii CBS 4309]
gi|342301117|emb|CCC68882.1| hypothetical protein NCAS_0B07980 [Naumovozyma castellii CBS 4309]
Length = 175
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI VLLRDG+ L G+LR+FDQ+AN++L+ ERI + + Y + LG+++IRGENVV++
Sbjct: 56 KIFVLLRDGKLLFGILRTFDQYANLILQHCVERIYLTEENKYAENELGIFMIRGENVVML 115
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 116 GEVDIDKEDKP 126
>gi|323337049|gb|EGA78305.1| Lsm1p [Saccharomyces cerevisiae Vin13]
Length = 172
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + Y + G+++IRGENVV++
Sbjct: 53 KIXVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVML 112
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 113 GEVDIDKEDQP 123
>gi|323332984|gb|EGA74386.1| Lsm1p [Saccharomyces cerevisiae AWRI796]
Length = 167
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + Y + G+++IRGENVV++
Sbjct: 53 KIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVML 112
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 113 GEVDIDKEDQP 123
>gi|312084671|ref|XP_003144370.1| U6 snRNA-associated Sm-family protein LSm [Loa loa]
gi|307760468|gb|EFO19702.1| U6 snRNA-associated Sm-family protein LSm [Loa loa]
Length = 139
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGR L+G LR+ DQFAN+VL ERI V Y DI G+++IRGENVVL GE
Sbjct: 21 KLLVVLRDGRTLIGYLRTIDQFANLVLHETLERIHVDKYYGDIQRGVFLIRGENVVLAGE 80
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQK 85
+D E +E + + +S EI Q+
Sbjct: 81 ID-ETKEQSSGLIPLSAKEILSLQR 104
>gi|363753170|ref|XP_003646801.1| hypothetical protein Ecym_5215 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890437|gb|AET39984.1| hypothetical protein Ecym_5215 [Eremothecium cymbalariae
DBVPG#7215]
Length = 152
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + + Y + G++++RGENVV++
Sbjct: 33 KIFVLLRDGRMLFGVLRTFDQYANLILQHCVERIYITEENQYAECERGVFMVRGENVVML 92
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 93 GEIDIDKEDKP 103
>gi|444319832|ref|XP_004180573.1| hypothetical protein TBLA_0D05620 [Tetrapisispora blattae CBS 6284]
gi|387513615|emb|CCH61054.1| hypothetical protein TBLA_0D05620 [Tetrapisispora blattae CBS 6284]
Length = 156
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
K+ VLLRDGR L G+LR+FDQ+AN++L+ ERI + + Y + G+++IRGENVV++
Sbjct: 37 KVFVLLRDGRMLFGVLRTFDQYANLILQHCVERIYLTKENQYSEESRGVFMIRGENVVML 96
Query: 59 GELDLEKEELP-AHMTCVSTAEIKRAQKAEKD 89
GE+D++KE+ P +M + + ++ ++A+ +
Sbjct: 97 GEVDIDKEDAPLENMEFIPWRDAQKIREAQNE 128
>gi|323354402|gb|EGA86241.1| Lsm1p [Saccharomyces cerevisiae VL3]
Length = 167
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + Y + G+++IRGENVV++
Sbjct: 53 KIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVML 112
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 113 GEVDIDKEDQP 123
>gi|58261498|ref|XP_568159.1| RNA cap binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115443|ref|XP_773435.1| hypothetical protein CNBI0490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256061|gb|EAL18788.1| hypothetical protein CNBI0490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230241|gb|AAW46642.1| RNA cap binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 135
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+GL RS+DQFAN +LE ER+ Y D +G+ ++RGENVV +GE
Sbjct: 20 KVLVILRDGRKLIGLFRSYDQFANFLLESCVERLHYKLEYADKDIGVLLVRGENVVALGE 79
Query: 61 LDLEKEEL-PAHMTCVSTAEIK---RAQKAEKDATVLKGSMRKRMEFLD 105
+DL E++ P V E K ++ E+D V K S+ +M F++
Sbjct: 80 IDLIAEDMVPLQQVNVQEIEEKISAENKQRERDHAV-KESVLSKMGFVN 127
>gi|17533843|ref|NP_496385.1| Protein LSM-1 [Caenorhabditis elegans]
gi|3876945|emb|CAA93263.1| Protein LSM-1 [Caenorhabditis elegans]
Length = 125
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G LRS DQFAN++LE ER V +C+ G +IRGENV L GE
Sbjct: 21 KLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETGQGFMLIRGENVELAGE 80
Query: 61 LDLEKEELPAHMTCVSTAEIKR 82
+D + + +T VS E +R
Sbjct: 81 ID---DTIETGLTQVSPEEFRR 99
>gi|156846192|ref|XP_001645984.1| hypothetical protein Kpol_1031p30 [Vanderwaltozyma polyspora DSM
70294]
gi|156116655|gb|EDO18126.1| hypothetical protein Kpol_1031p30 [Vanderwaltozyma polyspora DSM
70294]
Length = 177
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + Y + G++++RGENVV++
Sbjct: 58 KIFVLLRDGRMLFGVLRTFDQYANLILQHCVERIYFTEENKYAEEERGVFMVRGENVVML 117
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 118 GEVDIDKEDKP 128
>gi|254581194|ref|XP_002496582.1| ZYRO0D03432p [Zygosaccharomyces rouxii]
gi|238939474|emb|CAR27649.1| ZYRO0D03432p [Zygosaccharomyces rouxii]
Length = 185
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
K+ VLLRDG+ L G+LR+FDQ+AN++LE ERI + Y + GL+++RGENVV++
Sbjct: 66 KVFVLLRDGKMLFGVLRTFDQYANLILEHCVERIYFTEKNKYAEEYRGLFMVRGENVVML 125
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 126 GEVDIDKEDQP 136
>gi|403217847|emb|CCK72340.1| hypothetical protein KNAG_0J02610 [Kazachstania naganishii CBS
8797]
Length = 183
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 54/69 (78%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
KI VLLRDG+ L G+LR+FDQ+AN++L+ ERI + Y + G++++RGENVV++GE
Sbjct: 66 KIFVLLRDGKLLFGVLRTFDQYANLLLQHCVERIYLEGKYAEEDRGVFMVRGENVVMLGE 125
Query: 61 LDLEKEELP 69
+D++KE+ P
Sbjct: 126 VDIDKEDEP 134
>gi|50309253|ref|XP_454633.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643768|emb|CAG99720.1| KLLA0E15159p [Kluyveromyces lactis]
Length = 179
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV--GDLYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR G+LR+FDQ+AN++L+ ERI + + Y + G+++IRGENVV++
Sbjct: 60 KIFVLLRDGRMFFGVLRTFDQYANLILQHTVERIYIEGENKYGECDRGVFMIRGENVVML 119
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 120 GEVDIDKEDAP 130
>gi|401397747|ref|XP_003880128.1| hypothetical protein NCLIV_005690 [Neospora caninum Liverpool]
gi|325114537|emb|CBZ50093.1| hypothetical protein NCLIV_005690 [Neospora caninum Liverpool]
Length = 174
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 50/62 (80%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+G LR+FDQF N+VLEG +R++V + Y D+ +G ++RG+N++L G
Sbjct: 68 KLLVVLRDGRKLIGYLRTFDQFGNIVLEGTVQRLLVDNAYADLYVGCMIVRGDNMILFGA 127
Query: 61 LD 62
+D
Sbjct: 128 VD 129
>gi|358389037|gb|EHK26630.1| hypothetical protein TRIVIDRAFT_50053 [Trichoderma virens Gv29-8]
Length = 169
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 56/78 (71%), Gaps = 11/78 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG-----------DLYCDIPLGLYV 49
K++V+LRDGRKL+G+LRS+DQFAN+VL+ ERI + DI G+++
Sbjct: 41 KLMVVLRDGRKLIGVLRSWDQFANIVLQSTTERIFAPRPDNPGSEYPYGYFADITHGIFL 100
Query: 50 IRGENVVLIGELDLEKEE 67
+RGENV+L+GE+DL+K++
Sbjct: 101 VRGENVLLLGEIDLDKDD 118
>gi|392578215|gb|EIW71343.1| hypothetical protein TREMEDRAFT_60273 [Tremella mesenterica DSM
1558]
Length = 135
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRK++G+ RS+DQFAN ++E ER+ Y D +G+ ++RGENVV +GE
Sbjct: 20 KVLVILRDGRKIIGVFRSYDQFANFLMESVVERLYHKMEYADRDIGILLVRGENVVAVGE 79
Query: 61 LDLEKEEL-PAHMTCVS---TAEIKRAQKAEKDATVLKGSMRK 99
+DL E+L P T V T + K +KD + + +R+
Sbjct: 80 IDLIAEDLIPLRETSVENIMTRITEENTKRDKDQIIKENVLRE 122
>gi|45198309|ref|NP_985338.1| AFL212Cp [Ashbya gossypii ATCC 10895]
gi|44984196|gb|AAS53162.1| AFL212Cp [Ashbya gossypii ATCC 10895]
gi|374108566|gb|AEY97472.1| FAFL212Cp [Ashbya gossypii FDAG1]
Length = 152
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--LYCDIPLGLYVIRGENVVLI 58
KI VLLRDGR L G+LR+FDQ+AN++L+ ERI + + Y + G++++RGENVV++
Sbjct: 33 KIFVLLRDGRMLFGVLRTFDQYANLILQHCVERIYIPEEGQYGECERGVFMVRGENVVML 92
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 93 GEVDIDKEDKP 103
>gi|328867402|gb|EGG15785.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 84
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 51/61 (83%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V+LRDG+K +G++R+FDQFAN++L+ ERI VG+ Y D LG++ IRG+NVV++GE
Sbjct: 15 KLIVVLRDGKKFIGVMRTFDQFANIILQDTVERIYVGNCYSDKYLGVFFIRGDNVVILGE 74
Query: 61 L 61
+
Sbjct: 75 I 75
>gi|402076659|gb|EJT72082.1| hypothetical protein GGTG_11329 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 190
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 11/72 (15%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD-----------LYCDIPLGLYV 49
K+++ LRDGRKL G+LRS+DQFAN+VL+ ER+ V LY DIP GL++
Sbjct: 62 KLMIALRDGRKLSGVLRSWDQFANLVLQSTTERLFVPPGSTTGAPEDRGLYADIPRGLFL 121
Query: 50 IRGENVVLIGEL 61
+RGENV+L+GE+
Sbjct: 122 VRGENVLLLGEI 133
>gi|406859798|gb|EKD12861.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 170
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 14/75 (18%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--------------LYCDIPLG 46
K++V LRDGRKL+G+LRS+DQFAN+VL+ ERI V LY D+P G
Sbjct: 39 KLMVALRDGRKLIGVLRSWDQFANLVLQSTIERIFVPPSSTPTKPGNEYQPGLYADVPRG 98
Query: 47 LYVIRGENVVLIGEL 61
++ +RGENV+L+GE+
Sbjct: 99 IFFVRGENVLLLGEI 113
>gi|405119473|gb|AFR94245.1| RNA cap binding protein [Cryptococcus neoformans var. grubii H99]
Length = 135
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LV+LRDGRKL+GL RS+DQFAN +LE ER+ Y D +G+ ++RGENVV +GE
Sbjct: 20 KVLVILRDGRKLIGLFRSYDQFANFLLESCVERLHYKLEYADKDIGVLLVRGENVVALGE 79
Query: 61 LDLEKEEL-PAHMTCVSTAEIK---RAQKAEKDATVLKGSMRKRMEFLD 105
+DL E++ P + E K ++ E+D V K ++ +M F++
Sbjct: 80 IDLIAEDMVPLQQVNLQEIEEKISAENKQRERDHAV-KEAVLSKMGFVN 127
>gi|68478982|ref|XP_716425.1| potential mRNA decapping complex component Lsm1 [Candida albicans
SC5314]
gi|46438093|gb|EAK97429.1| potential mRNA decapping complex component Lsm1 [Candida albicans
SC5314]
Length = 167
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 64/100 (64%), Gaps = 8/100 (8%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD------LYCDIPLGLYVIRGEN 54
KI VLL+DGR L G+LR+FDQFAN+VL+ ERI +G+ + + G++++RGEN
Sbjct: 44 KIFVLLKDGRNLFGILRTFDQFANLVLQDTLERIYLGEEGEAPTRFSETYRGVFMVRGEN 103
Query: 55 VVLIGELDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLK 94
VV++GE+D++ E+ H+ + + AQ+ K+ K
Sbjct: 104 VVMLGEMDIDTED--DHLEKLEQVPFEVAQRELKEQQAKK 141
>gi|156044792|ref|XP_001588952.1| hypothetical protein SS1G_10500 [Sclerotinia sclerotiorum 1980]
gi|154694888|gb|EDN94626.1| hypothetical protein SS1G_10500 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 176
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 69/114 (60%), Gaps = 23/114 (20%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD-------------LYCDIPLGL 47
K+++ LRDGRKL+G+LRS+DQF VL+ ERI V LY D+P GL
Sbjct: 48 KLMISLRDGRKLIGILRSWDQF---VLQSTVERIFVAPPSPSTPGAVTQPGLYADVPRGL 104
Query: 48 YVIRGENVVLIGELDLEKEELPAHMTCVSTAEI-------KRAQKAEKDATVLK 94
+++RGENV+L+GE+DL+K++ + AE+ +RA ++KD + LK
Sbjct: 105 FLVRGENVLLLGEIDLDKDDDAPPGYEKADAELVHKLDKERRALDSKKDKSRLK 158
>gi|354545754|emb|CCE42482.1| hypothetical protein CPAR2_201250 [Candida parapsilosis]
Length = 164
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 53/70 (75%), Gaps = 3/70 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV---GDLYCDIPLGLYVIRGENVVL 57
KI VLL+DGR G+LR+FDQFAN+VL+ ERI V + +I G++++RGENVV+
Sbjct: 44 KIFVLLKDGRNFFGILRTFDQFANLVLQDTFERIYVEGEPKKFGEIYRGVFIVRGENVVM 103
Query: 58 IGELDLEKEE 67
+GELD+++E+
Sbjct: 104 MGELDIDRED 113
>gi|366998974|ref|XP_003684223.1| hypothetical protein TPHA_0B01170 [Tetrapisispora phaffii CBS 4417]
gi|357522519|emb|CCE61789.1| hypothetical protein TPHA_0B01170 [Tetrapisispora phaffii CBS 4417]
Length = 157
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLI 58
K+ VLLRDGR L G+LR+FDQ+AN++L+ ERI + Y + G++++RGENVV++
Sbjct: 38 KVFVLLRDGRILFGVLRTFDQYANLILQYCVERIYFTEENKYAEELRGVFMVRGENVVML 97
Query: 59 GELDLEKEELPAHM 72
GE+D++KE+ P M
Sbjct: 98 GEVDIDKEDKPLEM 111
>gi|171689342|ref|XP_001909611.1| hypothetical protein [Podospora anserina S mat+]
gi|170944633|emb|CAP70744.1| unnamed protein product [Podospora anserina S mat+]
Length = 193
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 56/76 (73%), Gaps = 9/76 (11%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD---------LYCDIPLGLYVIR 51
K+++ LRDGRKL+G+LRS+DQFAN+VL+ ERI V ++ DI G +++R
Sbjct: 66 KLMISLRDGRKLIGILRSWDQFANLVLQSTKERIFVPPVLSEKEPTGIFADIDRGTFLVR 125
Query: 52 GENVVLIGELDLEKEE 67
GENV+L+GE+DL+K++
Sbjct: 126 GENVLLLGEIDLDKDD 141
>gi|400597652|gb|EJP65382.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 196
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 26/97 (26%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV------------------------ 36
K++V+LRDGRKL+G+LRS+DQFAN+VL+ ERI
Sbjct: 52 KLMVVLRDGRKLVGVLRSWDQFANIVLQSTTERIFALQPPSPPPTEAADSETTAAATATT 111
Query: 37 --GDLYCDIPLGLYVIRGENVVLIGELDLEKEELPAH 71
LY DI G++++RGENV+L+GE+DL+++++P
Sbjct: 112 TPRGLYADIFHGIFLVRGENVLLLGEMDLDRDDIPPR 148
>gi|448085441|ref|XP_004195860.1| Piso0_005285 [Millerozyma farinosa CBS 7064]
gi|359377282|emb|CCE85665.1| Piso0_005285 [Millerozyma farinosa CBS 7064]
Length = 180
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 11/78 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD-----------LYCDIPLGLYV 49
KI VLLRDGR L G+LR+FDQFAN+V++ ERI + D Y ++ G+++
Sbjct: 52 KIFVLLRDGRNLFGVLRTFDQFANLVIQDTVERIYLDDENSDGTKDKVRRYGEVYRGVFM 111
Query: 50 IRGENVVLIGELDLEKEE 67
IRGENVV++GELD++ E+
Sbjct: 112 IRGENVVMMGELDIDTED 129
>gi|448080960|ref|XP_004194769.1| Piso0_005285 [Millerozyma farinosa CBS 7064]
gi|359376191|emb|CCE86773.1| Piso0_005285 [Millerozyma farinosa CBS 7064]
Length = 180
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 11/78 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD-----------LYCDIPLGLYV 49
KI VLLRDGR L G+LR+FDQFAN+V++ ERI + D Y ++ G+++
Sbjct: 52 KIFVLLRDGRNLFGVLRTFDQFANLVIQDTVERIYLDDENSDGTKDKVRRYGEVYRGVFM 111
Query: 50 IRGENVVLIGELDLEKEE 67
IRGENVV++GELD++ E+
Sbjct: 112 IRGENVVMMGELDIDTED 129
>gi|56753874|gb|AAW25134.1| SJCHGC05770 protein [Schistosoma japonicum]
gi|226469900|emb|CAX70231.1| LSM1 homolog, U6 small nuclear RNA associated [Schistosoma
japonicum]
gi|226469902|emb|CAX70232.1| LSM1 homolog, U6 small nuclear RNA associated [Schistosoma
japonicum]
Length = 139
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V LR GR +G LR DQF NVVL A ERI V + +CD+P G+ +IRGEN+++IG+
Sbjct: 21 KMVVSLRGGRMFIGFLRIIDQFGNVVLHNAVERIHVENKFCDVPQGILLIRGENIIIIGD 80
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFL 104
L+ E + + VS EI + Q+ + A K +KR E
Sbjct: 81 LNPEV-NIDEKLERVSEKEIYKLQQEQTAAR--KELAKKRAELF 121
>gi|255723090|ref|XP_002546479.1| hypothetical protein CTRG_05957 [Candida tropicalis MYA-3404]
gi|240130996|gb|EER30558.1| hypothetical protein CTRG_05957 [Candida tropicalis MYA-3404]
Length = 168
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 55/73 (75%), Gaps = 6/73 (8%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD------LYCDIPLGLYVIRGEN 54
KI VLLRDGR L G+LR+FDQFAN+VL+ ERI + + + ++ G++++RGEN
Sbjct: 45 KIFVLLRDGRNLFGILRTFDQFANLVLQDTFERIYLQEEGEAPARFGEVYRGVFMVRGEN 104
Query: 55 VVLIGELDLEKEE 67
VV++GELD+++E+
Sbjct: 105 VVMMGELDIDRED 117
>gi|50293209|ref|XP_449016.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528329|emb|CAG61986.1| unnamed protein product [Candida glabrata]
Length = 158
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL--YCDIPLGLYVIRGENVVLI 58
KI VLLRDG+ G+LR+FDQ+AN++L+ ERI V + Y + G+++IRGENVV++
Sbjct: 39 KIFVLLRDGKLFFGVLRTFDQYANLILQDCVERIYVQENGEYAEEDRGIFMIRGENVVML 98
Query: 59 GELDLEKEELP 69
GE+D++KE+ P
Sbjct: 99 GEVDIDKEDEP 109
>gi|367054976|ref|XP_003657866.1| hypothetical protein THITE_2124020 [Thielavia terrestris NRRL 8126]
gi|347005132|gb|AEO71530.1| hypothetical protein THITE_2124020 [Thielavia terrestris NRRL 8126]
Length = 179
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%), Gaps = 9/70 (12%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD---------LYCDIPLGLYVIR 51
K++V LRDGRKLLG+LRS+DQFAN+VL+ ERI V LY DI GL+++R
Sbjct: 53 KLMVALRDGRKLLGILRSWDQFANLVLQSTKERIFVPPGTAPNQTRGLYADIDRGLFLVR 112
Query: 52 GENVVLIGEL 61
GENV+L+GE+
Sbjct: 113 GENVLLMGEI 122
>gi|238880277|gb|EEQ43915.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 167
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 54/73 (73%), Gaps = 6/73 (8%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD------LYCDIPLGLYVIRGEN 54
KI VLL+DGR L G+LR+FDQFAN+VL+ ERI +G+ + + G++++RGEN
Sbjct: 44 KIFVLLKDGRNLFGILRTFDQFANLVLQDTLERIYLGEEGEAPTRFSETYRGVFMVRGEN 103
Query: 55 VVLIGELDLEKEE 67
VV++GE+D++ E+
Sbjct: 104 VVMLGEMDIDTED 116
>gi|358337817|dbj|GAA36813.2| U6 snRNA-associated Sm-like protein LSm1 [Clonorchis sinensis]
Length = 137
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K++V L GR G LR DQF NVVL A ERI V +CDIP G+ +IRGEN++LIGE
Sbjct: 19 KMMVYLHGGRVYFGFLRIIDQFGNVVLHQAFERIHVDKKFCDIPQGILMIRGENIILIGE 78
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEF 103
+D E + + VS EI A +AE+ A S R+ F
Sbjct: 79 VD-ENCNIEEQLELVSEKEIY-ALQAERTAARKALSKRRAQLF 119
>gi|149235237|ref|XP_001523497.1| hypothetical protein LELG_05343 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452906|gb|EDK47162.1| hypothetical protein LELG_05343 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 186
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 10/94 (10%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-GDLYCDIP-------LGLYVIRG 52
KI VLLRDGR L G+LR+FDQFAN+VL+ ERI + GD P G++++RG
Sbjct: 61 KIFVLLRDGRNLFGILRTFDQFANLVLQDTFERIYLDGDENDGQPKQFGEEYRGVFMVRG 120
Query: 53 ENVVLIGELDLEKEELPAHMTCVSTAEIKRAQKA 86
ENVV++GELD++ E+ H+ + + A+K
Sbjct: 121 ENVVMMGELDIDTED--GHLEKLQQIPFEEAEKG 152
>gi|224004408|ref|XP_002295855.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585887|gb|ACI64572.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 109
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 53/71 (74%), Gaps = 4/71 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD----LYCDIPLGLYVIRGENVV 56
++LV+LRDGR L+G LR+FDQFAN+VLE ER I+G+ D+ LGLYV+RG+ VV
Sbjct: 16 RMLVVLRDGRHLVGTLRTFDQFANMVLEDTSERRILGETTTCYQADVKLGLYVVRGDVVV 75
Query: 57 LIGELDLEKEE 67
L+GE+D E +
Sbjct: 76 LMGEVDDEGSQ 86
>gi|378726968|gb|EHY53427.1| hypothetical protein HMPREF1120_01620 [Exophiala dermatitidis
NIH/UT8656]
Length = 216
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 34/100 (34%)
Query: 5 LLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--------------------------- 37
+LRDGRK+ G+LRS+DQFAN+VL ER V
Sbjct: 68 VLRDGRKIFGVLRSWDQFANLVLTDTRERYFVSIPAGTSPDAISATASQDAPSLSANTSL 127
Query: 38 -------DLYCDIPLGLYVIRGENVVLIGELDLEKEELPA 70
+LYCDIP G Y++RGENV+L+GE+DL++E+ P
Sbjct: 128 STATLPRNLYCDIPRGTYLVRGENVLLLGEVDLDREDDPP 167
>gi|294655141|ref|XP_457238.2| DEHA2B06402p [Debaryomyces hansenii CBS767]
gi|199429721|emb|CAG85236.2| DEHA2B06402p [Debaryomyces hansenii CBS767]
Length = 172
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 12/95 (12%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD----------LYCDIPLGLYVI 50
KI VLLRDGR L G+LR+FDQFAN+VL+ ERI + + + G++++
Sbjct: 45 KIFVLLRDGRNLFGILRTFDQFANLVLQDTIERIYLDSDDETDDSRPKKFGEAYRGVFMV 104
Query: 51 RGENVVLIGELDLEKEELPAHMTCVSTAEIKRAQK 85
RGENVV++GELD+++E+ H+ + + A+K
Sbjct: 105 RGENVVMMGELDIDRED--DHLEELQQVSFEEAEK 137
>gi|384487468|gb|EIE79648.1| U6 snRNA-associated Sm-like protein LSm1 [Rhizopus delemar RA
99-880]
Length = 68
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 3/59 (5%)
Query: 3 LVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+V+LRDGRKL+G LRSFDQF VL+ ERI VG Y DIP G+++IRGENVVL+GE+
Sbjct: 1 MVVLRDGRKLIGTLRSFDQF---VLQDTIERIYVGQCYGDIPRGIFLIRGENVVLLGEI 56
>gi|302899081|ref|XP_003047975.1| hypothetical protein NECHADRAFT_100373 [Nectria haematococca mpVI
77-13-4]
gi|256728907|gb|EEU42262.1| hypothetical protein NECHADRAFT_100373 [Nectria haematococca mpVI
77-13-4]
Length = 171
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 11/72 (15%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-----------GDLYCDIPLGLYV 49
K++V LRDGRKL+G+LRS+DQFAN+VL+ ERI LY DI G+++
Sbjct: 43 KLMVALRDGRKLIGVLRSWDQFANLVLQSTIERIFAPLPESAGSDQPAGLYADITHGIFL 102
Query: 50 IRGENVVLIGEL 61
+RGENV+L+GE+
Sbjct: 103 VRGENVLLLGEI 114
>gi|427777815|gb|JAA54359.1| Putative der and-387 small nuclear ribonucleoprotein splicing
factor [Rhipicephalus pulchellus]
Length = 204
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 17 RSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTCVS 76
RS DQFAN+VL ERI VG Y DIP G++VIRG+NVVL+GE+D +KE+ A + VS
Sbjct: 71 RSIDQFANLVLHQTIERIHVGRQYGDIPRGIFVIRGDNVVLLGEIDEDKEK-DADLEEVS 129
Query: 77 TAEIKRAQKAEKDA 90
+I Q+ E DA
Sbjct: 130 VEDILEVQRIEADA 143
>gi|341038886|gb|EGS23878.1| hypothetical protein CTHT_0005870 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 209
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%), Gaps = 9/70 (12%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD---------LYCDIPLGLYVIR 51
K++V LRDGRKL+G+LRS+DQFAN+VL+ ERI + LY DI GL+++R
Sbjct: 83 KLMVALRDGRKLIGILRSWDQFANLVLQSTKERIFIPPNTMPNQPRGLYADIDRGLFLVR 142
Query: 52 GENVVLIGEL 61
GENV+L+GE+
Sbjct: 143 GENVLLLGEI 152
>gi|320580108|gb|EFW94331.1| Alpha 4 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 384
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-GDLYCD-IPLGLYVIRGENVVLI 58
K+ VLLRDGR ++G+LR+FDQFAN+V+ ERI + G Y + +++IRGENVV++
Sbjct: 32 KVFVLLRDGRSVIGVLRTFDQFANLVIHDGVERIYLDGSRYGESTEPQIFLIRGENVVMM 91
Query: 59 GELDLEKEELP 69
GELD++KE+ P
Sbjct: 92 GELDIDKEDEP 102
>gi|342873296|gb|EGU75499.1| hypothetical protein FOXB_13986 [Fusarium oxysporum Fo5176]
Length = 169
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 11/72 (15%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD-----------LYCDIPLGLYV 49
K++V LRDGRKL+G+LRS+DQFAN+VL+ ERI LY DI G+++
Sbjct: 41 KLMVALRDGRKLIGVLRSWDQFANLVLQSTVERIFAPSPESAGSDRPTGLYADINHGIFL 100
Query: 50 IRGENVVLIGEL 61
+RGENV+L+GE+
Sbjct: 101 VRGENVLLLGEI 112
>gi|46138721|ref|XP_391051.1| hypothetical protein FG10875.1 [Gibberella zeae PH-1]
gi|408390592|gb|EKJ69984.1| hypothetical protein FPSE_09829 [Fusarium pseudograminearum CS3096]
Length = 169
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 11/72 (15%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD-----------LYCDIPLGLYV 49
K++V LRDGRKL+G+LRS+DQFAN+VL+ ERI LY DI G+++
Sbjct: 41 KLMVALRDGRKLIGVLRSWDQFANLVLQSTIERIFAPSPDSAGSDRPTGLYADINHGIFL 100
Query: 50 IRGENVVLIGEL 61
+RGENV+L+GE+
Sbjct: 101 VRGENVLLLGEI 112
>gi|336468246|gb|EGO56409.1| hypothetical protein NEUTE1DRAFT_45645 [Neurospora tetrasperma FGSC
2508]
gi|350289506|gb|EGZ70731.1| Sm-like ribonucleoprotein [Neurospora tetrasperma FGSC 2509]
Length = 163
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 10/71 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD----------LYCDIPLGLYVI 50
K++V LRDGRKL G+LRS+DQFAN+VL+ ERI V LY D+ GL+V+
Sbjct: 36 KLMVALRDGRKLTGILRSWDQFANLVLQQTKERIFVPPGTQSPAQTRGLYADVDRGLFVV 95
Query: 51 RGENVVLIGEL 61
RGENV+L+GE+
Sbjct: 96 RGENVLLMGEI 106
>gi|126138906|ref|XP_001385976.1| hypothetical protein PICST_68190 [Scheffersomyces stipitis CBS
6054]
gi|126093254|gb|ABN67947.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 166
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 20/122 (16%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD----------------LYCDIP 44
KI VLLRDGR L G+LR+FDQFAN+VL+ ERI + + +
Sbjct: 33 KIFVLLRDGRNLFGILRTFDQFANLVLQDTVERIYLDNDKKQPEPQEDGSIEQKRFGQAY 92
Query: 45 LGLYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIKRAQK--AEKDATVLKGSMRKRME 102
G++++RGENVV++GELD+++E+ H+ + + A+K + A ++ + +
Sbjct: 93 RGIFMVRGENVVMMGELDIDRED--DHLAELQQIPFEEAEKELEKSHAETIRNEKTRSKQ 150
Query: 103 FL 104
FL
Sbjct: 151 FL 152
>gi|429966262|gb|ELA48259.1| hypothetical protein VCUG_00300 [Vavraia culicis 'floridensis']
Length = 106
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 59
+++ L DGR + G+LRSFDQF N+ LE RI VGD Y + LGLY+IRGEN++LIG
Sbjct: 18 HVVIYLHDGRYMYGVLRSFDQFNNITLEQTVCRIFVGDEYAERRLGLYIIRGENIILIG 76
>gi|310796734|gb|EFQ32195.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 177
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 11/72 (15%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-----------GDLYCDIPLGLYV 49
K++V LRDGRKL+G+LRS+DQFAN+VL+ ERI G L+ DI G+++
Sbjct: 49 KLMVALRDGRKLIGVLRSWDQFANLVLQDTVERIYAHPDPDANPPREGGLFADIKRGIFL 108
Query: 50 IRGENVVLIGEL 61
+RGENV+L+GE+
Sbjct: 109 VRGENVLLLGEI 120
>gi|358060802|dbj|GAA93573.1| hypothetical protein E5Q_00217 [Mixia osmundae IAM 14324]
Length = 145
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--LYCDIPLGLYVIRGENVVLI 58
K+LV+LRDGRKL+G+ RS+DQ+AN VL E+I + + +G+Y++RGENV L+
Sbjct: 25 KVLVVLRDGRKLMGMFRSYDQYANFVLCDTIEQIYHPESQTIAERQVGVYLVRGENVALL 84
Query: 59 GELDLEKEELPA 70
GE+DLE E+ P
Sbjct: 85 GEIDLELEDEPP 96
>gi|380484749|emb|CCF39799.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 177
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 72/116 (62%), Gaps = 20/116 (17%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-----------GDLYCDIPLGLYV 49
K++V LRDGRKL+G+LRS+DQFAN+VL+ ER+ G ++ DI G+++
Sbjct: 49 KLMVALRDGRKLIGVLRSWDQFANLVLQDTVERVYAYPDLEANPPREGGMFADIKRGIFL 108
Query: 50 IRGENVVLIGELDLEKEEL------PAHMTCVSTAEIKRAQKAEKDATVLKGSMRK 99
+RGENV+L+GE+DL+K++ PA + V A++ +KD KG ++K
Sbjct: 109 VRGENVLLLGEIDLDKDDDPPPGYEPADLKLVQGLA---AERKDKDKARDKGRIKK 161
>gi|429860091|gb|ELA34841.1| small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 178
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 11/72 (15%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-----------GDLYCDIPLGLYV 49
K++V LRDGRKL+G+LRS+DQFAN+VL+ ER+ L+ DI G+++
Sbjct: 50 KLMVALRDGRKLIGVLRSWDQFANLVLQDTIERVFAHPDPEANPPRPSGLFADIKRGIFL 109
Query: 50 IRGENVVLIGEL 61
+RGENV+L+GE+
Sbjct: 110 VRGENVLLLGEI 121
>gi|344233801|gb|EGV65671.1| Sm-like ribonucleo protein [Candida tenuis ATCC 10573]
Length = 166
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 10/77 (12%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV---GDLYCDIPL-------GLYVI 50
KI +LLRDGR L G+LR+FDQFAN+VL+ ERI + G + P G++++
Sbjct: 39 KIFLLLRDGRNLFGVLRTFDQFANLVLQDTTERIYLDAEGSKSLEKPARFGETYRGVFMV 98
Query: 51 RGENVVLIGELDLEKEE 67
RGENVV++G +D++ E+
Sbjct: 99 RGENVVMMGAVDIDHED 115
>gi|440492571|gb|ELQ75126.1| Small Nuclear ribonucleoprotein splicing factor
[Trachipleistophora hominis]
Length = 106
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 59
+++ L DGR + G+LRSFDQF N+ LE RI + D Y + LGL+VIRGEN++LIG
Sbjct: 18 HVVIYLHDGRYMYGILRSFDQFNNITLEQTVCRIFIDDEYAERRLGLHVIRGENIILIG 76
>gi|50545209|ref|XP_500142.1| YALI0A16775p [Yarrowia lipolytica]
gi|49646007|emb|CAG84074.1| YALI0A16775p [Yarrowia lipolytica CLIB122]
Length = 144
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERI--IVGDLYCDIPLGLYVIRGENVVLI 58
K++V LR GRK G+LRSFDQFAN+VL+ E+ + +Y + G Y+IRGENV L+
Sbjct: 27 KVVVTLRGGRKFFGILRSFDQFANLVLQDTYEKYFAVPEKVYGEEYRGTYIIRGENVELM 86
Query: 59 GELDLEKEELPA----HMTCVSTAEIKRAQKAEKDATVLKGSMRK 99
GE++L+ E+L A V+ K+ + AE LK +M+K
Sbjct: 87 GEVNLD-EDLAAIDYEEKNGVTVNGYKKVEFAEAKKLALK-TMQK 129
>gi|440804396|gb|ELR25273.1| u6 snrnaassociated sm-like protein lsm8, putative [Acanthamoeba
castellanii str. Neff]
Length = 94
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+ ++ D R ++G LR FDQFANV++E + ER+ +PLGLYVIRG+N+ +IGEL
Sbjct: 12 VSIITSDARSIVGTLRGFDQFANVIVEDSHERVYSAQGMEKVPLGLYVIRGDNIAVIGEL 71
Query: 62 D 62
+
Sbjct: 72 N 72
>gi|403160315|ref|XP_003890597.1| hypothetical protein PGTG_20884 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169505|gb|EHS63902.1| hypothetical protein PGTG_20884 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 149
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++LV+ +DGR + G L+ FDQ N++L + ER+ D ++PLGLY++RG+++ +IG
Sbjct: 65 RVLVITQDGRTITGELKGFDQTTNIILSDSVERVYSSDEPMEEVPLGLYIVRGDHISVIG 124
Query: 60 ELDLEKE 66
ELD+E +
Sbjct: 125 ELDVEAD 131
>gi|391345950|ref|XP_003747244.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Metaseiulus occidentalis]
Length = 96
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGE 60
+ V+ DGR +G L+ FDQ N++L+ + ER+ V D +P+GLY+IRGENVVL+GE
Sbjct: 13 VHVVTADGRNFVGTLKGFDQTINIILQESHERVFSVQDGVQKVPMGLYIIRGENVVLVGE 72
Query: 61 LDLEKEE 67
LD E E+
Sbjct: 73 LDEEIEK 79
>gi|219129332|ref|XP_002184845.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403630|gb|EEC43581.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 225
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 55/79 (69%), Gaps = 10/79 (12%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII---------VGDLYCDIPLGLYVIR 51
++L++LRDG+ ++G L S+DQF+N++L ER + + Y D+PLGLYV+R
Sbjct: 103 RVLIVLRDGKHVVGTLVSYDQFSNLILHETVERRMKRCRETSTGIVTYYADVPLGLYVVR 162
Query: 52 GENVVLIGELDLEKEELPA 70
G+++VL G L ++++++PA
Sbjct: 163 GDSIVLCGPL-VDEDDIPA 180
>gi|358054578|dbj|GAA99504.1| hypothetical protein E5Q_06204 [Mixia osmundae IAM 14324]
Length = 95
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIG 59
++LV+ DGR +LG L+ FDQ NV+L + ER+ + + ++PLGL+V+RG+NV L+G
Sbjct: 11 RVLVITADGRTILGDLKGFDQTTNVILSDSIERVYSLEEPVEEVPLGLFVVRGDNVTLVG 70
Query: 60 ELDLEKE 66
ELD E+E
Sbjct: 71 ELDGERE 77
>gi|294955662|ref|XP_002788617.1| small nuclear ribonucleoprotein U6, putative [Perkinsus marinus
ATCC 50983]
gi|239904158|gb|EER20413.1| small nuclear ribonucleoprotein U6, putative [Perkinsus marinus
ATCC 50983]
Length = 137
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 11 KLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPA 70
KL+G L+++DQF N+VL+ ER + LY DI LG+ +IRGEN+VL GE+D E
Sbjct: 44 KLIGWLKTYDQFGNIVLQNTLERHVADGLYADIDLGIMIIRGENIVLFGEVDSLDMEPAL 103
Query: 71 HMTCVSTAEIKRAQKAEKDA 90
+ + AE++A
Sbjct: 104 QQAPLGQVLAREEMNAEREA 123
>gi|397601577|gb|EJK57942.1| hypothetical protein THAOC_21966, partial [Thalassiosira oceanica]
Length = 306
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 20/82 (24%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV---------GD-----------LY 40
++LV+LRDGR L+G+L++FDQFAN+V++ ER I+ GD
Sbjct: 175 RLLVILRDGRHLVGVLKTFDQFANMVMQDTAERRILVVKRADEKDGDSETNSAPKSICYQ 234
Query: 41 CDIPLGLYVIRGENVVLIGELD 62
DI LGL+++RG+NVVL+GE+D
Sbjct: 235 TDIMLGLFIVRGDNVVLMGEVD 256
>gi|449270863|gb|EMC81511.1| U6 snRNA-associated Sm-like protein LSm1, partial [Columba livia]
Length = 108
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 23 ANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIKR 82
AN+VL ERI VG Y DIP G++V+RGENVVL+GE+DLEKE + VS EI
Sbjct: 14 ANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKES-DTPLQQVSIEEILE 72
Query: 83 AQKAEKDA 90
Q+ E+ A
Sbjct: 73 EQRVEQQA 80
>gi|312066607|ref|XP_003136350.1| U6 snRNA-associated Sm-like protein LSm8 [Loa loa]
gi|307768477|gb|EFO27711.1| U6 snRNA-associated Sm-like protein LSm8 [Loa loa]
Length = 98
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
I V+ DGR ++GL++ FDQ N+VLE + ER+ D + IPLGLY++RG+NV +IGE
Sbjct: 13 ISVITGDGRNIVGLMKGFDQTINLVLEDSHERVFSEDAGVEQIPLGLYIVRGDNVAVIGE 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|406603277|emb|CCH45205.1| Sm-like protein LSm1 [Wickerhamomyces ciferrii]
Length = 154
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 59/96 (61%), Gaps = 9/96 (9%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V L DGR L G+LR+FDQ+ + L + Y + +G+ +IRGEN+V+IG+
Sbjct: 47 KVCVTLTDGRHLFGVLRTFDQYGKIYLSD--------NRYGEEYVGVLLIRGENIVIIGD 98
Query: 61 LDLEKEELP-AHMTCVSTAEIKRAQKAEKDATVLKG 95
+D++KE+ P + +T + + K+ QK +D ++ G
Sbjct: 99 VDIDKEDEPLSRLTRIPFPDAKQLQKQSQDQALVDG 134
>gi|281346897|gb|EFB22481.1| hypothetical protein PANDA_005488 [Ailuropoda melanoleuca]
Length = 96
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 22 FANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIK 81
AN+VL ERI VG Y DIP G++V+RGENVVL+GE+DLEKE + VS EI
Sbjct: 1 IANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKES-DTPLQQVSIEEIL 59
Query: 82 RAQKAEKDA 90
Q+ E+
Sbjct: 60 EEQRVEQQT 68
>gi|391347595|ref|XP_003748045.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform 1
[Metaseiulus occidentalis]
gi|391347597|ref|XP_003748046.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform 2
[Metaseiulus occidentalis]
Length = 146
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 59/98 (60%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
I+V+LR+ + L+G LR+ DQF N+VL+ ER VG Y DIP G+ ++R ENV L+GE
Sbjct: 28 IMVVLRNDQILIGKLRAIDQFNNLVLQYTIERPHVGKYYGDIPRGVLMVRAENVQLLGEY 87
Query: 62 DLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRK 99
D ++ + + I+ Q+ E+ + V + + R+
Sbjct: 88 DADRAQHVGLVNVGIEKIIELKQEVEEKSRVERETRRR 125
>gi|170585854|ref|XP_001897697.1| U6 snRNA-associated Sm-like protein LSm8 [Brugia malayi]
gi|158595004|gb|EDP33581.1| U6 snRNA-associated Sm-like protein LSm8, putative [Brugia
malayi]
gi|402593521|gb|EJW87448.1| small nuclear ribonucleoprotein splicing factor [Wuchereria
bancrofti]
Length = 98
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
I V+ DGR ++GL++ FDQ N+VLE + ER+ D + IPLGLY++RG+NV +IGE
Sbjct: 13 ISVITGDGRNIVGLMKGFDQTINLVLEDSHERVFSEDSGVEQIPLGLYIVRGDNVAVIGE 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|261195584|ref|XP_002624196.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239588068|gb|EEQ70711.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239610441|gb|EEQ87428.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
Length = 216
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 13 LGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKE-ELPAH 71
L R + AN+VL+G ER+ G+L+ DI G+Y+IRGENV+L+GE+DL+KE ++P
Sbjct: 111 LPFFRQRMEIANLVLQGTVERLYAGNLFADIQRGIYLIRGENVLLLGEVDLDKEDDIPTG 170
Query: 72 MTCVSTAEIKRAQKAEKDATVLKGSMRK 99
E+ A K ++D KG R+
Sbjct: 171 YRQAPFEEV-FALKKQEDNERKKGDKRR 197
>gi|324537696|gb|ADY49512.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Ascaris
suum]
Length = 98
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
I V+ DGR ++GL++ FDQ N+VLE + ER+ D + IPLGLY++RG+NV ++GE
Sbjct: 13 ISVITGDGRNIVGLMKGFDQTINLVLEDSHERVFSEDAGVEQIPLGLYIVRGDNVAVVGE 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|321255028|ref|XP_003193285.1| RNA cap binding protein [Cryptococcus gattii WM276]
gi|317459755|gb|ADV21498.1| RNA cap binding protein, putative [Cryptococcus gattii WM276]
Length = 160
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 30/134 (22%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFA-------------------------NVVLEGACERII 35
K+LV+LRDGRKLLG+ RS+DQFA N +LE ER+
Sbjct: 20 KVLVILRDGRKLLGVFRSYDQFAFLLQPLCFDGILHILGILMQHANAANFLLESCVERLH 79
Query: 36 VGDLYCDIPLGLYVIRGENVVLIGELDLEKEEL-PAHMTCVSTAEIK---RAQKAEKDAT 91
Y D +G+ ++RGENVV +GE+DL E++ P + E K ++ E+D
Sbjct: 80 YKLEYADKDIGVLLVRGENVVALGEIDLIAEDMVPLQQVNLQEIEEKISAENKQRERDHA 139
Query: 92 VLKGSMRKRMEFLD 105
V K S+ +M F++
Sbjct: 140 V-KESVLSKMGFVN 152
>gi|452824963|gb|EME31962.1| U6 snRNA-associated Sm-like protein LSm8 [Galdieria sulphuraria]
Length = 95
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIGE 60
+ V+ DGR L+G+L+ FDQ NV+LE ERI D+ ++ +GLYV+RG+++ ++GE
Sbjct: 12 VSVVTNDGRILIGILKGFDQSCNVILESTVERIFGTDVAMQEVAVGLYVLRGDDIAILGE 71
Query: 61 LDLEKEE 67
LD EKE
Sbjct: 72 LDAEKES 78
>gi|328766541|gb|EGF76595.1| hypothetical protein BATDEDRAFT_92607 [Batrachochytrium
dendrobatidis JAM81]
Length = 97
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDL 63
V+ DGR +LG L FDQ N++L A ERI G+ D+PLGLYV+RG+++ ++G +D
Sbjct: 14 VVTNDGRVILGKLEGFDQTTNLILSSAKERIFSGEGSQDLPLGLYVVRGDSITVVGLVDE 73
Query: 64 EKE 66
E++
Sbjct: 74 EQD 76
>gi|297682708|ref|XP_002819054.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Pongo
abelii]
Length = 99
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 23 ANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIKR 82
N+VL ERI VG Y DIP G++V+RGENVVL+GE+DLEKE + VS EI
Sbjct: 5 PNLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKES-DTPLQQVSIEEILE 63
Query: 83 AQKAEKDA 90
Q+ E+
Sbjct: 64 EQRVEQQT 71
>gi|401826479|ref|XP_003887333.1| LSM domain-containing protein [Encephalitozoon hellem ATCC 50504]
gi|392998492|gb|AFM98352.1| LSM domain-containing protein [Encephalitozoon hellem ATCC 50504]
Length = 107
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 59
+++V+LRDGR L G+++SFDQF ++ L+G ERI Y + L++IRGEN+ +IG
Sbjct: 19 EVVVMLRDGRYLYGIMKSFDQFNSITLDGVIERIFHDGKYAERKHELFIIRGENITMIG 77
>gi|19173671|ref|NP_597474.1| U6 snRNA-ASSOCIATED SMALL RIBONUCLEOPROTEIN (Sm-LIKE PROTEIN)
[Encephalitozoon cuniculi GB-M1]
gi|19170877|emb|CAD26651.1| U6 snRNA-ASSOCIATED SMALL RIBONUCLEOPROTEIN (Sm-LIKE PROTEIN)
[Encephalitozoon cuniculi GB-M1]
gi|449329221|gb|AGE95495.1| U6 snRNA-associated small ribonucleoprotein [Encephalitozoon
cuniculi]
Length = 102
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 59
+++V+LRDGR L G+++SFDQF +V L+G ERI Y + L++IRGEN+ +IG
Sbjct: 19 EVVVMLRDGRYLYGVMKSFDQFNSVTLDGVIERIFHDTRYAERRHELFIIRGENITMIG 77
>gi|255075791|ref|XP_002501570.1| predicted protein [Micromonas sp. RCC299]
gi|226516834|gb|ACO62828.1| predicted protein [Micromonas sp. RCC299]
Length = 96
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP-LGLYVIRGENVVLIG 59
+I V+ DGR ++G+LR FDQ N++LE ER+ D + LGLY+IRG+N+ +IG
Sbjct: 12 QISVITNDGRNIIGILRGFDQTTNLILEECFERVYSEDSGVEQAVLGLYIIRGDNIAIIG 71
Query: 60 ELDLEKEELPAHMTCVST 77
ELD EEL A + +T
Sbjct: 72 ELD---EELDAELDLANT 86
>gi|295673983|ref|XP_002797537.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280187|gb|EEH35753.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 191
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Query: 24 NVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKE-ELPAHMTCVSTAEIKR 82
N+VL+G ERI G L+ D+ G+Y++RGENV+L+GE+DL+KE ++PA S E+
Sbjct: 97 NLVLQGTVERIYAGHLFADVQRGIYLVRGENVLLLGEIDLDKEDDIPAGYRQASYDEV-F 155
Query: 83 AQKAEKDATVLKGSMRK--RMEFLDFD 107
A K +D KG R+ +++ L F+
Sbjct: 156 ALKKREDEQRKKGDRRRSNKLQALGFE 182
>gi|213404570|ref|XP_002173057.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
gi|212001104|gb|EEB06764.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
Length = 94
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
++ V+ DGR +LG LR FDQ N++L + ER+I D + IPLGLY+IRGENV ++G
Sbjct: 10 QVEVITNDGRCVLGSLRGFDQTTNLILSNSKERLISWDQETEVIPLGLYIIRGENVAMVG 69
Query: 60 ELD 62
+D
Sbjct: 70 LVD 72
>gi|396464109|ref|XP_003836665.1| hypothetical protein LEMA_P042010.1 [Leptosphaeria maculans JN3]
gi|312213218|emb|CBX93300.1| hypothetical protein LEMA_P042010.1 [Leptosphaeria maculans JN3]
Length = 230
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--------------LYCDIPL- 45
K+ +LLRD ++ +G+LRS+DQFAN+VL ERI + L D+ L
Sbjct: 101 KVDILLRDEKEYIGILRSYDQFANLVLTECYERIAARNPDATPSSDPSIPRWLIHDVKLP 160
Query: 46 GLYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIKR---AQKAEKDAT 91
G+ IRGENV + +DL++EE P T +++ +QKAEK T
Sbjct: 161 GIMTIRGENVTICATVDLDREESPRGATFADVDQVRTLAASQKAEKKET 209
>gi|328859290|gb|EGG08400.1| hypothetical protein MELLADRAFT_105058 [Melampsora larici-populina
98AG31]
Length = 124
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++LV+ +DGR + G L+ FDQ N++L + ER+ D ++PLGLYV+RG+++ +IG
Sbjct: 40 RVLVITQDGRTITGDLKGFDQTTNIILSESIERVYSADEPMEEVPLGLYVVRGDHISVIG 99
Query: 60 ELDLE 64
ELD++
Sbjct: 100 ELDVD 104
>gi|145349245|ref|XP_001419048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579279|gb|ABO97341.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 97
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++ V+ DGR ++G LR FDQ NV+LE ER+ + + PLG+Y+IRG+NV L+G
Sbjct: 13 RVSVITNDGRHIVGTLRGFDQVTNVILEDCAERVYSSESGVEEAPLGVYMIRGDNVALVG 72
Query: 60 ELDLEKEELPAHMTCVST 77
+D EEL A + T
Sbjct: 73 PVD---EELDAELDLSET 87
>gi|403412868|emb|CCL99568.1| predicted protein [Fibroporia radiculosa]
Length = 95
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
+IL++L+DGR ++G++ +DQ +NVVL + ER+ D +IPLGLY+++G+ +VLIG
Sbjct: 11 RILLILQDGRSIVGVMAGYDQKSNVVLSDSKERVYSADEGVEEIPLGLYLVKGDQIVLIG 70
Query: 60 ELD 62
E+D
Sbjct: 71 EVD 73
>gi|303389423|ref|XP_003072944.1| U6 snRNA-associated small Sm-like ribonucleoprotein
[Encephalitozoon intestinalis ATCC 50506]
gi|303302087|gb|ADM11584.1| U6 snRNA-associated small Sm-like ribonucleoprotein
[Encephalitozoon intestinalis ATCC 50506]
Length = 109
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+++V+LRDGR L G+++SFDQF ++ L+ ERI Y + L+++RGEN+ +IG
Sbjct: 19 EVVVMLRDGRYLYGVMKSFDQFNSITLDKVIERIFHDGKYGERKHELFIVRGENITMIG- 77
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKA 86
L+ E+ +T V+ +++ +A
Sbjct: 78 --LKSPEIAEELTQVNFWDLREEIQA 101
>gi|390599071|gb|EIN08468.1| LSM-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 95
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G L FDQ +NVVL + ERI D ++PLGLY+++G+ + LIG
Sbjct: 11 RVLLVLQDGRSIVGTLSGFDQKSNVVLSDSTERIYSTDEGVEEVPLGLYLVKGDMIALIG 70
Query: 60 ELD 62
ELD
Sbjct: 71 ELD 73
>gi|449544647|gb|EMD35620.1| hypothetical protein CERSUDRAFT_116344 [Ceriporiopsis
subvermispora B]
Length = 95
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G++ FDQ +NVVL + ER+ D +IPLGLY+++G+ +VLIG
Sbjct: 11 RVLLILQDGRAIVGVMAGFDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDQIVLIG 70
Query: 60 ELD 62
ELD
Sbjct: 71 ELD 73
>gi|336388555|gb|EGO29699.1| hypothetical protein SERLADRAFT_378975 [Serpula lacrymans var.
lacrymans S7.9]
Length = 95
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G++ FDQ +NVVL + ER+ D +IPLGLY+++G+ +VLIG
Sbjct: 11 RVLLILQDGRSIVGIMAGFDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDMIVLIG 70
Query: 60 ELDLEKEE 67
E+D E ++
Sbjct: 71 EIDDEADQ 78
>gi|402469076|gb|EJW04137.1| hypothetical protein EDEG_01573 [Edhazardia aedis USNM 41457]
Length = 105
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+++L+ +G+ L G LRSFDQ+ ++ LE ER+ Y + GLY++RGEN+V+IG
Sbjct: 24 VVILMWEGKYLYGKLRSFDQYNSITLENTIERVFNNGKYTERKCGLYIVRGENIVIIGLT 83
Query: 62 DLE 64
+L+
Sbjct: 84 NLK 86
>gi|225684614|gb|EEH22898.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 191
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Query: 24 NVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKE-ELPAHMTCVSTAEIKR 82
N+VL+G ERI G L+ D+ G+Y++RGENV+L+GE+DL+KE ++P+ S E+
Sbjct: 97 NLVLQGTVERIYAGHLFADVQRGIYLVRGENVLLLGEIDLDKEDDIPSGYRQASYDEV-F 155
Query: 83 AQKAEKDATVLKGSMRK--RMEFLDFD 107
A K +D KG R+ +++ L F+
Sbjct: 156 ALKKREDEQRKKGDKRRSNKLQALGFE 182
>gi|169851696|ref|XP_001832537.1| hypothetical protein CC1G_03551 [Coprinopsis cinerea
okayama7#130]
gi|116506391|gb|EAU89286.1| hypothetical protein CC1G_03551 [Coprinopsis cinerea
okayama7#130]
Length = 95
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
+++++L+DGR ++GLL FDQ +NVVL + ER+ D +IPLGLY+++G+ ++LIG
Sbjct: 11 RVVLILQDGRVIVGLLAGFDQKSNVVLSDSKERVFSTDEGVEEIPLGLYLVKGDMIILIG 70
Query: 60 ELDLE 64
ELD E
Sbjct: 71 ELDEE 75
>gi|339248315|ref|XP_003375791.1| putative LSM domain protein [Trichinella spiralis]
gi|316970790|gb|EFV54665.1| putative LSM domain protein [Trichinella spiralis]
Length = 184
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 7/77 (9%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+ ++ DGR ++G+++ FDQ N+VLE + ER+ + + +PLGLYVIRGEN+ ++GE
Sbjct: 100 VSIITGDGRHIVGIMKGFDQTINLVLEDSHERVYSMNHGVEQVPLGLYVIRGENIAVVGE 159
Query: 61 LD------LEKEELPAH 71
+D L+ E + AH
Sbjct: 160 IDEDLDKRLDLENIRAH 176
>gi|367043690|ref|XP_003652225.1| hypothetical protein THITE_2087360 [Thielavia terrestris NRRL
8126]
gi|346999487|gb|AEO65889.1| hypothetical protein THITE_2087360 [Thielavia terrestris NRRL
8126]
Length = 97
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII----VGDLYCDIPLGLYVIRGENVV 56
K+ ++ DGR L+G L + D N+VL+ ER+I G+ ++PLGLY+IRGENV
Sbjct: 10 KVCIITTDGRNLVGTLAAHDHTTNLVLKNTVERVIRTPDEGEPSVEVPLGLYIIRGENVC 69
Query: 57 LIGELDLEKEELPAHMTCVSTAEIKRA 83
L+G +D E L A ++ AE+K A
Sbjct: 70 LVGLVD---EALDA---SINWAEVKGA 90
>gi|296812089|ref|XP_002846382.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238841638|gb|EEQ31300.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 179
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 23 ANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEK-EELPAHMTCVSTAEIK 81
N+VL+ ER+ +LY DIP G+Y+IRGENV+L+GE+DL+K +++P +E+
Sbjct: 84 TNIVLQDTVERLYAENLYADIPRGVYLIRGENVLLLGEIDLDKDDDIPEPYQLAPASEVL 143
Query: 82 RAQKAEKDATVLKGSMRK 99
+K +D K R
Sbjct: 144 ELRKKAEDQRKRKDKKRN 161
>gi|346470191|gb|AEO34940.1| hypothetical protein [Amblyomma maculatum]
gi|346470193|gb|AEO34941.1| hypothetical protein [Amblyomma maculatum]
gi|427786053|gb|JAA58478.1| Putative small nuclear ribonucleoprotein splicing factor
[Rhipicephalus pulchellus]
Length = 96
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L+ + ER+ D + +PLGLY++RG+NVV++G
Sbjct: 12 TVSIITADGRHIVGTLKGFDQTINLILDESHERVYSSDHGVEQVPLGLYIVRGDNVVVVG 71
Query: 60 ELDLEKEELPAHM 72
++D +EL H+
Sbjct: 72 QVD---DELDMHL 81
>gi|403412047|emb|CCL98747.1| predicted protein [Fibroporia radiculosa]
Length = 439
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIGE 60
+L++L+DGR ++G++ +DQ +NVVL + ER+ D +IPLGLY+++G+ +VLIGE
Sbjct: 356 VLLILQDGRSIIGVMAGYDQKSNVVLSDSKERVYSADEGVEEIPLGLYLVKGDQIVLIGE 415
Query: 61 LD 62
++
Sbjct: 416 VN 417
>gi|388854537|emb|CCF51924.1| related to LSM8-Component of small nuclear ribonucleoprotein
complexes involved in RNA processing and splicing
[Ustilago hordei]
Length = 96
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+LV+ +DGR ++GLL+ D +++L + ERI D + +PLGLY++RG+ + L+G+
Sbjct: 12 VLVITQDGRVIVGLLKGSDSVGSIILANSVERIFSSDQGVEELPLGLYILRGDGISLVGQ 71
Query: 61 LDLEKEE 67
LD+EK++
Sbjct: 72 LDVEKDK 78
>gi|169608576|ref|XP_001797707.1| hypothetical protein SNOG_07370 [Phaeosphaeria nodorum SN15]
gi|111063716|gb|EAT84836.1| hypothetical protein SNOG_07370 [Phaeosphaeria nodorum SN15]
Length = 234
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 18/106 (16%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--------------LYCDIPL- 45
K+ VLLRD ++ +G+LRS+DQFAN+VL ERI + L D+ L
Sbjct: 104 KVDVLLRDEKEYIGILRSYDQFANLVLTECHERIAARNPDAEPSSAPSVPRWLIHDVKLP 163
Query: 46 GLYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIK---RAQKAEK 88
G+ IRGENV + +DL++E+ P E++ AQKAEK
Sbjct: 164 GVMTIRGENVTICATVDLDREDAPRGARFADVDEVRALAAAQKAEK 209
>gi|389747909|gb|EIM89087.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 95
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G++ +DQ +NVVL + ER+ D +IPLGLY+++G+ ++LIG
Sbjct: 11 RVLLILQDGRAIVGIMAGYDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDMIILIG 70
Query: 60 ELDLEKE 66
E+D E++
Sbjct: 71 EIDEEQD 77
>gi|378754575|gb|EHY64606.1| hypothetical protein NERG_02416 [Nematocida sp. 1 ERTm2]
Length = 109
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
I V++RDG+ ++G LRS+DQ+ N++LE + E Y I ++RGEN++L+GE
Sbjct: 22 IFVVMRDGKYMVGTLRSYDQYYNILLEDSTEYTTSSTEYSSIESESVLLRGENIILLGEG 81
Query: 62 DLEKEEL 68
EE+
Sbjct: 82 TFSHEEM 88
>gi|385305643|gb|EIF49604.1| lsm1p [Dekkera bruxellensis AWRI1499]
Length = 146
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--LYCDIPLG-LYVIRGENVVL 57
K++V L DGR L+G+LR+FDQF N+V+ ERI + D Y + Y+IRGENVV+
Sbjct: 28 KVIVNLWDGRTLVGVLRTFDQFGNLVIHDGVERIYLLDKKQYAESEKPRTYLIRGENVVM 87
Query: 58 IGELDLEKE-ELPAHMTCVSTAEIKRAQK 85
+ ELD++ E E + +T + K+ K
Sbjct: 88 MVELDIDMEDESLSELTRIDYDSAKKTWK 116
>gi|392561866|gb|EIW55047.1| LSM-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 95
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G++ +DQ +NVVL + ER+ D +IPLGLY+++G+ +VLIG
Sbjct: 11 RVLLILQDGRAIVGVMAGYDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDQIVLIG 70
Query: 60 ELD 62
E+D
Sbjct: 71 EVD 73
>gi|396081451|gb|AFN83068.1| U6 snRNA-associated small Sm-like protein [Encephalitozoon
romaleae SJ-2008]
Length = 107
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 59
+I+V+LRDGR L G+++SFDQF ++ L+ ERI + Y + L++IRGEN+ +IG
Sbjct: 19 EIVVVLRDGRYLYGIMKSFDQFNSITLDRVIERIFHDEKYAERKHELFIIRGENITMIG 77
>gi|170100064|ref|XP_001881250.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643929|gb|EDR08180.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 95
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G+L FDQ +NVVL + ER+ D +IPLGLY+++G+ +VLIG
Sbjct: 11 RVLLILQDGRAIVGVLAGFDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDMIVLIG 70
Query: 60 ELD 62
E+D
Sbjct: 71 EID 73
>gi|409048518|gb|EKM57996.1| hypothetical protein PHACADRAFT_251944 [Phanerochaete carnosa
HHB-10118-sp]
Length = 95
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G++ FDQ +NVVL + ER+ + +IPLGLY+++G+ +V+IG
Sbjct: 11 RVLLILQDGRAIVGVMAGFDQKSNVVLSDSKERVYSTEEGVEEIPLGLYLVKGDQIVVIG 70
Query: 60 ELD 62
ELD
Sbjct: 71 ELD 73
>gi|171687845|ref|XP_001908863.1| hypothetical protein [Podospora anserina S mat+]
gi|170943884|emb|CAP69536.1| unnamed protein product [Podospora anserina S mat+]
Length = 144
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
K+ ++ DGR L+G L ++D N+VL+ ERII + +PLGLY+IRGENV
Sbjct: 57 KVCIITTDGRTLVGTLAAYDNTTNLVLQNTIERIIRTPDDAEPSAQVPLGLYLIRGENVC 116
Query: 57 LIGELD 62
IG +D
Sbjct: 117 TIGLVD 122
>gi|240275998|gb|EER39511.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
Length = 297
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 37/44 (84%)
Query: 24 NVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEE 67
N+VL+G ER+ G+L+ DI G+Y++RGENV+L+GE+DL+KE+
Sbjct: 203 NLVLQGTVERLYAGNLFADIQRGIYLVRGENVLLLGEVDLDKED 246
>gi|392589005|gb|EIW78336.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 95
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G+L FDQ ANVVL + ER+ + + +IPLGLY+++G+ +VLIG
Sbjct: 11 RVLLVLQDGRSIVGVLAGFDQKANVVLSDSKERVYSLEEGVEEIPLGLYLVKGDMIVLIG 70
Query: 60 ELD 62
E+D
Sbjct: 71 EID 73
>gi|268536916|ref|XP_002633593.1| C. briggsae CBR-LSM-8 protein [Caenorhabditis briggsae]
Length = 98
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-GDLYCDIPLGLYVIRGENVVLIGELD 62
V+ DGR ++GLL+ FDQ N+V+E A ER D PLGLY+IRGENV +IGE+D
Sbjct: 15 VVTGDGRVIVGLLKGFDQLINLVIEDAHERCYSETDGVLITPLGLYIIRGENVAIIGEID 74
Query: 63 LE 64
E
Sbjct: 75 EE 76
>gi|367020158|ref|XP_003659364.1| hypothetical protein MYCTH_2296291 [Myceliophthora thermophila
ATCC 42464]
gi|347006631|gb|AEO54119.1| hypothetical protein MYCTH_2296291 [Myceliophthora thermophila
ATCC 42464]
Length = 97
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
K+ ++ DGR L+G L + D N+VL+ ER+I G+ ++PLGLY++RGENV
Sbjct: 10 KVCIITTDGRNLVGTLAAHDHTTNLVLKNTVERVIRSPEDGEPSVEVPLGLYIVRGENVC 69
Query: 57 LIGELDLEKEELPAHMTCVSTAEIKRA 83
++G +D E L A ++ AE+K A
Sbjct: 70 VVGLVD---EALDA---SINWAEVKGA 90
>gi|341882643|gb|EGT38578.1| hypothetical protein CAEBREN_11633 [Caenorhabditis brenneri]
gi|341899974|gb|EGT55909.1| hypothetical protein CAEBREN_04439 [Caenorhabditis brenneri]
Length = 98
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-GDLYCDIPLGLYVIRGENVVLIGELD 62
V+ DGR ++GLL+ FDQ N+V+E A ER + PLGLY+IRGENV +IGE+D
Sbjct: 15 VVTGDGRVIVGLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLYIIRGENVAIIGEID 74
Query: 63 LE 64
E
Sbjct: 75 EE 76
>gi|303277307|ref|XP_003057947.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460604|gb|EEH57898.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
I V+ DGR ++G+LR FDQ N++L+ ER+ + PLGLY+IRG+N+ +IGE
Sbjct: 13 ISVITSDGRNIVGVLRGFDQTTNLILDECFERVYSASSGVEEAPLGLYIIRGDNIAVIGE 72
Query: 61 LDLE 64
+D E
Sbjct: 73 IDDE 76
>gi|330842842|ref|XP_003293378.1| hypothetical protein DICPUDRAFT_90215 [Dictyostelium purpureum]
gi|325076293|gb|EGC30091.1| hypothetical protein DICPUDRAFT_90215 [Dictyostelium purpureum]
Length = 94
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+LVL DGR ++G+LR DQ NV+LE ER+ + IPLG+++I+G++V +IGE
Sbjct: 11 KVLVLTADGRNIIGILRGTDQTTNVILEKCEERVFSDEGIEVIPLGVHLIKGDDVAVIGE 70
Query: 61 LDLE 64
+D E
Sbjct: 71 VDEE 74
>gi|308477573|ref|XP_003101000.1| CRE-LSM-8 protein [Caenorhabditis remanei]
gi|308264344|gb|EFP08297.1| CRE-LSM-8 protein [Caenorhabditis remanei]
Length = 98
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-GDLYCDIPLGLYVIRGENVVLIGELD 62
V+ DGR ++GLL+ FDQ N+V+E A ER + PLGLY+IRGENV +IGE+D
Sbjct: 15 VVTGDGRIIVGLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLYIIRGENVAIIGEID 74
Query: 63 LE 64
E
Sbjct: 75 EE 76
>gi|17544148|ref|NP_500964.1| Protein LSM-8 [Caenorhabditis elegans]
gi|351059336|emb|CCD74179.1| Protein LSM-8 [Caenorhabditis elegans]
Length = 98
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-GDLYCDIPLGLYVIRGENVVLIGELD 62
V+ DGR ++GLL+ FDQ N+V+E A ER + PLGLY+IRGENV +IGE+D
Sbjct: 15 VVTGDGRVIVGLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLYIIRGENVAIIGEID 74
Query: 63 LE 64
E
Sbjct: 75 EE 76
>gi|395323274|gb|EJF55754.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 95
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G + +DQ +NVVL + ER+ + + +IPLGLY+++G+ +VLIG
Sbjct: 11 RVLLILQDGRAIVGTMAGYDQKSNVVLSDSKERVYSIEEGVEEIPLGLYLVKGDQIVLIG 70
Query: 60 ELD 62
ELD
Sbjct: 71 ELD 73
>gi|313586493|gb|ADR71257.1| U6 snRNA-associated Sm-like protein LSm8 [Hevea brasiliensis]
Length = 98
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGE 60
I V+ DGR ++G+L+ FDQ N++L+ + ER+ + + LGLY+IRG+N+ ++GE
Sbjct: 15 ISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISIVGE 74
Query: 61 LDLEKEELPAHM 72
LD EEL +H+
Sbjct: 75 LD---EELDSHI 83
>gi|325093356|gb|EGC46666.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 262
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 37/45 (82%)
Query: 23 ANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEE 67
N+VL+G ER+ G+L+ DI G+Y++RGENV+L+GE+DL+KE+
Sbjct: 167 TNLVLQGTVERLYAGNLFADIQRGIYLVRGENVLLLGEVDLDKED 211
>gi|296816451|ref|XP_002848562.1| small nuclear ribonucleoprotein LSM8 [Arthroderma otae CBS
113480]
gi|238839015|gb|EEQ28677.1| small nuclear ribonucleoprotein LSM8 [Arthroderma otae CBS
113480]
Length = 98
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
KILVL DGR L+G L S DQ N+VL ERII + ++ GLY+IRG+NVV
Sbjct: 10 KILVLTVDGRTLIGTLLSTDQLTNLVLSQTIERIIRTPDDPEPSSEVEHGLYLIRGDNVV 69
Query: 57 LIGELDLEKEE 67
+ GE+D E +E
Sbjct: 70 ICGEIDEEVDE 80
>gi|156083833|ref|XP_001609400.1| U6 snRNA-associated Sm-like protein LSm8 [Babesia bovis T2Bo]
gi|154796651|gb|EDO05832.1| U6 snRNA-associated Sm-like protein LSm8, putative [Babesia
bovis]
Length = 94
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIG 59
++ V+ DGR +G L+ FDQ N+VL ER+ G + D+PLG+Y+IRG+N+ L+G
Sbjct: 12 QVCVVTVDGRVFIGDLKGFDQVTNLVLYNCVERVFRKGVPFEDLPLGIYLIRGDNIALVG 71
Query: 60 ELDLE 64
E+D+E
Sbjct: 72 EVDME 76
>gi|224059783|ref|XP_002299990.1| predicted protein [Populus trichocarpa]
gi|118484411|gb|ABK94082.1| unknown [Populus trichocarpa]
gi|222847248|gb|EEE84795.1| predicted protein [Populus trichocarpa]
Length = 98
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGE 60
I ++ DGR ++G+L+ FDQ N++L+ + ER+ + + LGLY+IRG+N+ ++GE
Sbjct: 15 ISIITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNIGVVGE 74
Query: 61 LDLEKEELPAHMTCVS 76
LD EEL AH+ S
Sbjct: 75 LD---EELDAHLDLSS 87
>gi|154282047|ref|XP_001541836.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412015|gb|EDN07403.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 251
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 37/45 (82%)
Query: 23 ANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEE 67
N+VL+G ER+ G+L+ DI G+Y++RGENV+L+GE+DL+KE+
Sbjct: 156 TNLVLQGTVERLYAGNLFADIQRGIYLVRGENVLLLGEVDLDKED 200
>gi|393232628|gb|EJD40208.1| LSM-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 95
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
++ ++L DGR ++G LR +DQ +N+VL + ERI D D LGLY+++G+ + LIG
Sbjct: 11 RVYLVLTDGRSIIGTLRGYDQKSNIVLSESVERIYSADSGVDEAQLGLYLVKGDTIALIG 70
Query: 60 ELD 62
ELD
Sbjct: 71 ELD 73
>gi|330907058|ref|XP_003295695.1| hypothetical protein PTT_02318 [Pyrenophora teres f. teres 0-1]
gi|311332811|gb|EFQ96206.1| hypothetical protein PTT_02318 [Pyrenophora teres f. teres 0-1]
Length = 235
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 18/106 (16%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--------------LYCDIPL- 45
K+ VLLRD ++ +G+LRS+DQFAN+VL ERI + L D+ L
Sbjct: 106 KVDVLLRDEKEYIGILRSYDQFANLVLTECYERIAARNPEAQPSSDPSIPRWLINDVKLP 165
Query: 46 GLYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIKR---AQKAEK 88
G+ IRGENV + +DL++EE P +++ +QK EK
Sbjct: 166 GVMTIRGENVTICATVDLDREEYPKGAKFAEEDQVRSLAASQKTEK 211
>gi|327293992|ref|XP_003231692.1| small nuclear ribonucleoprotein Lsm8 [Trichophyton rubrum CBS
118892]
gi|326466320|gb|EGD91773.1| small nuclear ribonucleoprotein Lsm8 [Trichophyton rubrum CBS
118892]
Length = 98
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
KILVL DGR LLG L S DQ N+VL ERII + ++ GLY+IRG+NVV
Sbjct: 10 KILVLTVDGRTLLGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSTEVEHGLYLIRGDNVV 69
Query: 57 LIGELDLE 64
+ GE+D E
Sbjct: 70 ICGEVDEE 77
>gi|219114825|ref|XP_002178208.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409943|gb|EEC49873.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 86
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR ++G+L +DQ N++L A ER+ D + +PLGLYV+RG+NV L+
Sbjct: 2 SVCVVTSDGRIIVGILTGYDQVQNLILNDAHERVYSVDADVEEVPLGLYVVRGDNVCLVA 61
Query: 60 ELDLEKEELPAHMTCVSTAEIKRAQ 84
E+D E ++L + I++ Q
Sbjct: 62 EVD-ETKQLDSQRVPFPLPSIQQQQ 85
>gi|111226386|ref|XP_001134524.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|121962459|sp|Q1ZXD5.1|NAA38_DICDI RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=Probable U6 snRNA-associated
Sm-like protein LSm8
gi|90970532|gb|EAS66841.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 94
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LVL DGR ++G LR DQ NVVLE ER+ + IPLG+++I+G++V +IGE
Sbjct: 11 QVLVLTADGRSIIGTLRGIDQTINVVLEKCHERVYSDEGIEVIPLGVHLIKGDDVAVIGE 70
Query: 61 LDLE 64
+D E
Sbjct: 71 VDDE 74
>gi|156405763|ref|XP_001640901.1| predicted protein [Nematostella vectensis]
gi|156228037|gb|EDO48838.1| predicted protein [Nematostella vectensis]
Length = 96
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIG 59
+ V+ +DGR ++G L+ FDQ NV+L+ + ER+ G + LGLY+IRG+N+ +IG
Sbjct: 12 TVAVITQDGRMIVGTLKGFDQTVNVILDDSHERVFSSGSGVEQVVLGLYIIRGDNIAVIG 71
Query: 60 ELDLE 64
E+D E
Sbjct: 72 EIDDE 76
>gi|412991296|emb|CCO16141.1| U6 snRNA-associated Sm-like protein LSm8 [Bathycoccus prasinos]
Length = 96
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-PLGLYVIRGENVVLIGE 60
I ++ DGR ++G LR FDQ N+++E ER+ + ++ PLGLYV+RG+NV L+G+
Sbjct: 13 ISIITNDGRHIVGHLRGFDQQTNLIVENCHERVYSMENGVEMAPLGLYVVRGDNVALVGD 72
Query: 61 LDLEKEE 67
+D E ++
Sbjct: 73 VDEELDQ 79
>gi|326475823|gb|EGD99832.1| small nuclear ribonucleoprotein Lsm8 [Trichophyton tonsurans CBS
112818]
gi|326479153|gb|EGE03163.1| small nuclear ribonucleoprotein LSM8 [Trichophyton equinum CBS
127.97]
Length = 98
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
KILVL DGR L+G L S DQ N+VL ERII + ++ GLY+IRG+NVV
Sbjct: 10 KILVLTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSTEVEHGLYLIRGDNVV 69
Query: 57 LIGELDLE 64
+ GE+D E
Sbjct: 70 ICGEVDEE 77
>gi|315050055|ref|XP_003174402.1| small nuclear ribonucleoprotein LSM8 [Arthroderma gypseum CBS
118893]
gi|311342369|gb|EFR01572.1| small nuclear ribonucleoprotein LSM8 [Arthroderma gypseum CBS
118893]
Length = 98
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
KILVL DGR L+G L S DQ N+VL ERII + ++ GLY+IRG+NVV
Sbjct: 10 KILVLTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSEVEHGLYLIRGDNVV 69
Query: 57 LIGELDLE 64
+ GE+D E
Sbjct: 70 ICGEVDEE 77
>gi|321471964|gb|EFX82935.1| hypothetical protein DAPPUDRAFT_100799 [Daphnia pulex]
Length = 96
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR +G+L+ FDQ N++++ + ER+ + + LGL++IRG+NVVLIG
Sbjct: 12 SVCVITSDGRNFIGILKGFDQTINLIIDDSHERVFSSTQGVEQVQLGLHIIRGDNVVLIG 71
Query: 60 ELDLE 64
E+D E
Sbjct: 72 EIDNE 76
>gi|451851002|gb|EMD64303.1| hypothetical protein COCSADRAFT_199693 [Cochliobolus sativus
ND90Pr]
Length = 241
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 18/106 (16%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--------------LYCDIPL- 45
K+ VLLRD ++ +G+LRS+DQFAN+VL ERI + L D+ L
Sbjct: 112 KVDVLLRDEKEYIGILRSYDQFANLVLTECYERIAARNPDVTPSSDPSVPRWLINDVKLP 171
Query: 46 GLYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIK---RAQKAEK 88
G+ +RGENV + +DL++EE P +++ +QKAE+
Sbjct: 172 GVMTVRGENVTICATVDLDREEHPRGAKFAEEDQVRALAASQKAER 217
>gi|451996339|gb|EMD88806.1| hypothetical protein COCHEDRAFT_1110556 [Cochliobolus
heterostrophus C5]
Length = 242
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 18/106 (16%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--------------LYCDIPL- 45
K+ VLLRD ++ +G+LRS+DQFAN+VL ERI + L D+ L
Sbjct: 113 KVDVLLRDEKEYIGILRSYDQFANLVLTECYERIAARNPDATPSSDPSVPRWLINDVKLP 172
Query: 46 GLYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIK---RAQKAEK 88
G+ +RGENV + +DL++EE P +++ +QKAE+
Sbjct: 173 GVMTVRGENVTICATVDLDREEHPRGAKFAEEDQVRALAASQKAER 218
>gi|443897860|dbj|GAC75199.1| hypothetical protein PANT_14d00082 [Pseudozyma antarctica T-34]
Length = 160
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
++LV+ +DGR ++G LR D +++L + ERI D + +PLGLY++RG+ + L+G
Sbjct: 11 RVLVITQDGRVIVGTLRGSDAVGSIILAASVERIFSPDEGVEEVPLGLYILRGDAICLVG 70
Query: 60 ELDLEKEE 67
+D+EK++
Sbjct: 71 LVDVEKDK 78
>gi|19076009|ref|NP_588509.1| U6 snRNP-associated protein Lsm8 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|59799781|sp|O74483.1|LSM8_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm8
gi|3395591|emb|CAA20133.1| U6 snRNP-associated protein Lsm8 (predicted) [Schizosaccharomyces
pombe]
Length = 94
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
++ V+ DGR +LG L+ FD N++L + ERII D + IPLG+Y++RGENV ++G
Sbjct: 10 RVQVITNDGRVVLGSLKGFDHTTNLILSDSFERIISMDQDMETIPLGVYLLRGENVAMVG 69
Query: 60 ----ELDLEKE 66
ELD E E
Sbjct: 70 LVNEELDSEIE 80
>gi|226291299|gb|EEH46727.1| splicing factor [Paracoccidioides brasiliensis Pb18]
Length = 208
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
K+L+L DGR L+G L S DQ N+VL ERII + + GLY+IRG+NVV
Sbjct: 10 KVLILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLYLIRGDNVV 69
Query: 57 LIGELD------LEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLD 105
+ GE+D ++ ++ M S+A + RA +D L S + +E L+
Sbjct: 70 ICGEVDEEIDSGIDWSKVKGEMFPRSSAMVLRAG---RDGNTLDSSGGEGIETLN 121
>gi|428671909|gb|EKX72824.1| U6 snRNA-associated Sm-like protein LSm8, putative [Babesia equi]
Length = 94
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 9/69 (13%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP-----LGLYVIRGENV 55
+ V+ DGR +G+L+ FDQ N+VL ER+ + D P LG+YV+RG+NV
Sbjct: 12 HVFVISVDGRVFVGVLKGFDQLTNLVLYNCIERV----YHVDSPVEELELGIYVVRGDNV 67
Query: 56 VLIGELDLE 64
VL+GE+DL+
Sbjct: 68 VLVGEVDLD 76
>gi|255565755|ref|XP_002523867.1| lsm1, putative [Ricinus communis]
gi|223536955|gb|EEF38593.1| lsm1, putative [Ricinus communis]
Length = 98
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP-LGLYVIRGENVVLIG 59
I V+ DGR ++G+L+ FDQ N++L+ + ER+ + LGLY+IRG+N+ ++G
Sbjct: 14 NISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQLHVLGLYIIRGDNISIVG 73
Query: 60 ELDLEKEELPAHMTCVS 76
ELD EEL +++ S
Sbjct: 74 ELD---EELDSNLDLAS 87
>gi|212542651|ref|XP_002151480.1| small nuclear ribonucleoprotein Lsm8, putative [Talaromyces
marneffei ATCC 18224]
gi|210066387|gb|EEA20480.1| small nuclear ribonucleoprotein Lsm8, putative [Talaromyces
marneffei ATCC 18224]
Length = 98
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
KILV+ DGR LLG L S DQ N+VL ERII + +I GLY+IRG+NVV
Sbjct: 10 KILVITVDGRTLLGTLLSTDQLTNLVLTQTVERIIRTPEDPEPSSEIEHGLYLIRGDNVV 69
Query: 57 LIGELD 62
+ GE+D
Sbjct: 70 VCGEVD 75
>gi|119190767|ref|XP_001245990.1| hypothetical protein CIMG_05431 [Coccidioides immitis RS]
Length = 186
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 36/45 (80%)
Query: 23 ANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEE 67
N+VL+ ER+ G+LY + P G+Y++RGENV+L+GE+DL+KE+
Sbjct: 91 TNLVLQDTVERVYSGNLYGEEPRGVYLVRGENVLLLGEIDLDKED 135
>gi|380471141|emb|CCF47424.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 99
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII----VGDLYCDIPLGLYVIRGENVV 56
K+L++ D R L+G L + DQ N+VL A ER+I G+ +PLGLY++RG+NV
Sbjct: 11 KVLIVTSDSRILVGTLEAADQSTNLVLSAAQERVIQTPESGEPSVQVPLGLYLVRGDNVC 70
Query: 57 LIGELD 62
IG +D
Sbjct: 71 TIGLVD 76
>gi|66356716|ref|XP_625536.1| small nuclear ribonucleoprotein U6 [Cryptosporidium parvum Iowa II]
gi|46226537|gb|EAK87525.1| small nuclear ribonucleoprotein U6 [Cryptosporidium parvum Iowa II]
Length = 160
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+I V+LRDGR+ G+ RSFDQ+ ++ LE + E D Y +I G + RG+N++L G
Sbjct: 53 EIYVVLRDGRQFTGIFRSFDQYGSLCLERSFEVFSNNDCYNEIYQGCMIFRGDNLMLCGL 112
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGS 96
+D + A + A+I + ++ EK+ + +
Sbjct: 113 IDQNIKSYNAKK--IPLADILKIKQEEKNLKSINSN 146
>gi|357016875|gb|AET50466.1| hypothetical protein [Eimeria tenella]
Length = 97
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-PLGLYVIRGENVVLIG 59
++ VL DGR +G L +FDQ N+VL E+++ D +I PLGLY++RG+N+ ++G
Sbjct: 12 RVCVLTFDGRLFMGTLIAFDQSTNIVLNKCAEKVVHEDAPVEIVPLGLYLLRGDNIAVVG 71
Query: 60 ELDLEKEE 67
++D + E+
Sbjct: 72 QVDEDVEK 79
>gi|6686407|gb|AAF23841.1|AC007234_13 F1E22.8 [Arabidopsis thaliana]
Length = 583
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGE 60
I V+ DGR ++G+L+ FDQ N++L+ + ER+ + LGLY+IRG+N+ +IGE
Sbjct: 500 ISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGVIGE 559
Query: 61 LDLEKEELPAHM 72
LD EEL A +
Sbjct: 560 LD---EELDASL 568
>gi|242207843|ref|XP_002469774.1| predicted protein [Postia placenta Mad-698-R]
gi|220731194|gb|EED85041.1| predicted protein [Postia placenta Mad-698-R]
Length = 95
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G++ +DQ +NVVL ER+ + + +IPLGLY+++G+ +VLI
Sbjct: 11 RVLLILQDGRAIVGVMAGYDQKSNVVLSDTKERVYSMEEGVEEIPLGLYLVKGDQIVLIA 70
Query: 60 ELD 62
ELD
Sbjct: 71 ELD 73
>gi|112253325|gb|ABI14250.1| Sm-like protein [Pfiesteria piscicida]
Length = 85
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+I V+ DGR +GLLR FDQ +NVVL ER+ + + + LGLYVIRG+N+ ++G
Sbjct: 12 QISVVTNDGRLFVGLLRGFDQTSNVVLSDCQERVFDTEKGVEQVVLGLYVIRGDNIAVVG 71
Query: 60 ELDLE 64
E+D E
Sbjct: 72 EVDEE 76
>gi|58258887|ref|XP_566856.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus neoformans
var. neoformans JEC21]
gi|134107025|ref|XP_777825.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260523|gb|EAL23178.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222993|gb|AAW41037.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 95
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+ V+L+DGR ++G L+ +D N++L + ER D + IPLGLYVI+G+NV ++ E
Sbjct: 12 VQVILQDGRVIVGKLKGYDPRTNLILSDSVEREFSMDQGVEMIPLGLYVIKGDNVAVVAE 71
Query: 61 LDLEKE 66
LD EK+
Sbjct: 72 LDEEKD 77
>gi|225454559|ref|XP_002263175.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Vitis vinifera]
gi|297737198|emb|CBI26399.3| unnamed protein product [Vitis vinifera]
Length = 98
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGE 60
I V+ DGR ++G+L+ FDQ N++L+ + ER+ + + LGLY+IRG+N+ ++GE
Sbjct: 15 ISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISIVGE 74
Query: 61 LDLE 64
LD E
Sbjct: 75 LDEE 78
>gi|121701687|ref|XP_001269108.1| small nuclear ribonucleoprotein (LSM8), putative [Aspergillus
clavatus NRRL 1]
gi|119397251|gb|EAW07682.1| small nuclear ribonucleoprotein (LSM8), putative [Aspergillus
clavatus NRRL 1]
Length = 98
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+L+L DGR LLG L S DQ N+VL ERII + I GLY+IRG+NVV
Sbjct: 10 KVLILTVDGRTLLGTLLSTDQLTNLVLVDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVV 69
Query: 57 LIGELD 62
L GE+D
Sbjct: 70 LCGEID 75
>gi|119184377|ref|XP_001243108.1| hypothetical protein CIMG_07004 [Coccidioides immitis RS]
gi|303320353|ref|XP_003070176.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240109862|gb|EER28031.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320041233|gb|EFW23166.1| small nuclear ribonucleoprotein Lsm8 [Coccidioides posadasii str.
Silveira]
gi|392865995|gb|EAS31853.2| small nuclear ribonucleoprotein Lsm8 [Coccidioides immitis RS]
Length = 98
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
K+LVL DGR L+G L S DQ N+VL ERII + ++ GLY+IRG+NVV
Sbjct: 10 KVLVLTVDGRTLIGTLLSTDQLTNLVLSETVERIIRPPDDPEPSSEVDHGLYLIRGDNVV 69
Query: 57 LIGELDLE 64
+ GE+D E
Sbjct: 70 ICGEIDEE 77
>gi|310793932|gb|EFQ29393.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 99
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII----VGDLYCDIPLGLYVIRGENVV 56
K+L++ D R L+G L + DQ N+VL A ER+I G+ +PLGLY++RG+NV
Sbjct: 11 KVLIVTADSRILVGTLEAADQSTNLVLSNAQERVIQTPESGEPSVQVPLGLYLVRGDNVC 70
Query: 57 LIGELD 62
IG +D
Sbjct: 71 TIGLVD 76
>gi|242769181|ref|XP_002341717.1| small nuclear ribonucleoprotein Lsm8, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724913|gb|EED24330.1| small nuclear ribonucleoprotein Lsm8, putative [Talaromyces
stipitatus ATCC 10500]
Length = 98
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+LV+ DGR LLG L S DQ N+VL ERII + +I GLY+IRG+NVV
Sbjct: 10 KVLVITVDGRTLLGTLLSTDQLTNLVLTQTVERIIRTPDDPEPSSEIEHGLYLIRGDNVV 69
Query: 57 LIGELD 62
+ GE+D
Sbjct: 70 ICGEVD 75
>gi|225679568|gb|EEH17852.1| splicing factor [Paracoccidioides brasiliensis Pb03]
Length = 98
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+L+L DGR L+G L S DQ N+VL ERII + + GLY+IRG+NVV
Sbjct: 10 KVLILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLYLIRGDNVV 69
Query: 57 LIGELDLE 64
+ GE+D E
Sbjct: 70 ICGEVDEE 77
>gi|449439529|ref|XP_004137538.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cucumis sativus]
gi|449514856|ref|XP_004164499.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cucumis sativus]
Length = 98
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGE 60
I V+ DGR ++G+L+ FDQ N++L+ + ER+ + + LGLY+IRG+N+ ++GE
Sbjct: 15 ISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISIVGE 74
Query: 61 LDLEKEELPAHM 72
LD EEL +++
Sbjct: 75 LD---EELDSNL 83
>gi|328773822|gb|EGF83859.1| hypothetical protein BATDEDRAFT_85570 [Batrachochytrium
dendrobatidis JAM81]
Length = 98
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 22 FANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKE-ELPAHMTCVSTAEI 80
FAN+VL+ ER + Y D+ G++ IRGENVVL+GE+D EK+ E A +T + +E
Sbjct: 2 FANLVLQDTVERTFIDGTYSDVYRGVFAIRGENVVLLGEIDPEKDAEALAKLTKATASET 61
Query: 81 KRAQKAEKD 89
K E+D
Sbjct: 62 VGKFKHEQD 70
>gi|302680881|ref|XP_003030122.1| hypothetical protein SCHCODRAFT_16460 [Schizophyllum commune
H4-8]
gi|300103813|gb|EFI95219.1| hypothetical protein SCHCODRAFT_16460 [Schizophyllum commune
H4-8]
Length = 95
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G+L FDQ +N++L ER+ D +IPLGLY+++G+ + LIG
Sbjct: 11 RVLLVLQDGRTIVGVLAGFDQKSNIILSECRERVYSMDEGVEEIPLGLYIVKGDMICLIG 70
Query: 60 ELDLEKE 66
E+D +++
Sbjct: 71 EIDNDRD 77
>gi|297841127|ref|XP_002888445.1| hypothetical protein ARALYDRAFT_315605 [Arabidopsis lyrata subsp.
lyrata]
gi|297334286|gb|EFH64704.1| hypothetical protein ARALYDRAFT_315605 [Arabidopsis lyrata subsp.
lyrata]
Length = 590
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGE 60
I V+ DGR ++G+L+ FDQ N++L+ + ER+ + LGLY+IRG+N+ +IGE
Sbjct: 507 ISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGVIGE 566
Query: 61 LDLEKEELPA 70
LD EEL A
Sbjct: 567 LD---EELDA 573
>gi|109139334|gb|ABE96774.2| U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
Length = 126
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 42 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 101
Query: 60 ELDLEKEE 67
E+D E +
Sbjct: 102 EIDEETDS 109
>gi|351723875|ref|NP_001237294.1| uncharacterized protein LOC100305829 [Glycine max]
gi|356525792|ref|XP_003531507.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Glycine max]
gi|255626721|gb|ACU13705.1| unknown [Glycine max]
Length = 98
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGE 60
I V+ DGR ++G+L+ FDQ N++L+ + ER+ + + LGLY+IRG+N+ ++GE
Sbjct: 15 ISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISVVGE 74
Query: 61 LDLE 64
LD E
Sbjct: 75 LDEE 78
>gi|70995556|ref|XP_752533.1| small nuclear ribonucleoprotein Lsm8 [Aspergillus fumigatus
Af293]
gi|119495627|ref|XP_001264594.1| small nuclear ribonucleoprotein (LSM8), putative [Neosartorya
fischeri NRRL 181]
gi|41581243|emb|CAE47892.1| u6 snrna-associated sm-like protein, putative [Aspergillus
fumigatus]
gi|66850168|gb|EAL90495.1| small nuclear ribonucleoprotein Lsm8, putative [Aspergillus
fumigatus Af293]
gi|119412756|gb|EAW22697.1| small nuclear ribonucleoprotein (LSM8), putative [Neosartorya
fischeri NRRL 181]
gi|159131288|gb|EDP56401.1| small nuclear ribonucleoprotein (LSM8), putative [Aspergillus
fumigatus A1163]
Length = 98
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+L+L DGR LLG L S DQ N+VL ERII + I GLY+IRG+NVV
Sbjct: 10 KVLILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVV 69
Query: 57 LIGELD 62
L GE+D
Sbjct: 70 LCGEVD 75
>gi|393213825|gb|EJC99320.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 95
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G+L FDQ +++VL ERI + + ++PLGLY+++G+ ++LIG
Sbjct: 11 RVLLVLQDGRTIVGVLAGFDQRSDIVLSDCVERIYSMEEGVEEVPLGLYLVKGDQILLIG 70
Query: 60 ELD 62
ELD
Sbjct: 71 ELD 73
>gi|340369040|ref|XP_003383057.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Amphimedon queenslandica]
Length = 97
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L + ER+ + + LGLY+IRG+N+ +IG
Sbjct: 13 SVSIITGDGRVIVGTLKGFDQTVNIILSNSHERVYSSSSGVEQVQLGLYIIRGDNIAVIG 72
Query: 60 ELDLE 64
ELD E
Sbjct: 73 ELDEE 77
>gi|240278846|gb|EER42352.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces capsulatus
H143]
gi|325090103|gb|EGC43413.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces capsulatus H88]
Length = 94
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+L+L DGR L+G L S DQ N+VL ERII + + GLY+IRG+NVV
Sbjct: 6 KVLILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTSDDPEPSSQVEHGLYLIRGDNVV 65
Query: 57 LIGELDLE 64
+ GE+D E
Sbjct: 66 ICGEVDEE 73
>gi|225560095|gb|EEH08377.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 98
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+L+L DGR L+G L S DQ N+VL ERII + + GLY+IRG+NVV
Sbjct: 10 KVLILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLYLIRGDNVV 69
Query: 57 LIGELDLE 64
+ GE+D E
Sbjct: 70 ICGEVDEE 77
>gi|149638763|ref|XP_001516404.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ornithorhynchus anatinus]
Length = 96
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 72 EIDEETD 78
>gi|7706425|ref|NP_057284.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Homo
sapiens]
gi|19527156|ref|NP_598700.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Mus
musculus]
gi|77736425|ref|NP_001029912.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos taurus]
gi|157819253|ref|NP_001100055.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Rattus
norvegicus]
gi|197102128|ref|NP_001125239.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Pongo
abelii]
gi|388453491|ref|NP_001253526.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|57096120|ref|XP_532529.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Canis lupus familiaris]
gi|126340603|ref|XP_001364736.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Monodelphis domestica]
gi|194209825|ref|XP_001501036.2| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Equus caballus]
gi|291391224|ref|XP_002712161.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8 [Oryctolagus
cuniculus]
gi|296210100|ref|XP_002751829.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Callithrix jacchus]
gi|301764070|ref|XP_002917457.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ailuropoda melanoleuca]
gi|311275562|ref|XP_003134801.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|332224269|ref|XP_003261290.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Nomascus leucogenys]
gi|332869198|ref|XP_001141412.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan troglodytes]
gi|344270905|ref|XP_003407282.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Loxodonta africana]
gi|345783317|ref|XP_003432400.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Canis lupus familiaris]
gi|348578839|ref|XP_003475189.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cavia porcellus]
gi|350595285|ref|XP_003484077.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|395539266|ref|XP_003771593.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sarcophilus harrisii]
gi|395738892|ref|XP_003777165.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Pongo abelii]
gi|395833654|ref|XP_003789838.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Otolemur garnettii]
gi|397474452|ref|XP_003808693.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan paniscus]
gi|410952710|ref|XP_003983022.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Felis catus]
gi|426227909|ref|XP_004008057.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Ovis aries]
gi|426357668|ref|XP_004046156.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Gorilla gorilla gorilla]
gi|10720071|sp|O95777.3|NAA38_HUMAN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|52783125|sp|Q6ZWM4.3|NAA38_MOUSE RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|75055136|sp|Q5RCP3.3|NAA38_PONAB RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|115312132|sp|Q3ZCE0.3|NAA38_BOVIN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|5919157|gb|AAD56232.1|AF182294_1 U6 snRNA-associated Sm-like protein LSm8 [Homo sapiens]
gi|4309884|gb|AAD15542.1| similar to Schizosaccharomyces pombe splicing factor; similar to
PID:3395591 [Homo sapiens]
gi|12803805|gb|AAH02742.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|18044123|gb|AAH19458.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|18490261|gb|AAH22440.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|26353716|dbj|BAC40488.1| unnamed protein product [Mus musculus]
gi|51095108|gb|EAL24351.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|55727417|emb|CAH90464.1| hypothetical protein [Pongo abelii]
gi|73586551|gb|AAI02500.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Bos taurus]
gi|74198481|dbj|BAE39723.1| unnamed protein product [Mus musculus]
gi|90080802|dbj|BAE89882.1| unnamed protein product [Macaca fascicularis]
gi|119603943|gb|EAW83537.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
gi|148681914|gb|EDL13861.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|149065053|gb|EDM15129.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted) [Rattus norvegicus]
gi|187469565|gb|AAI67094.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Rattus norvegicus]
gi|189065154|dbj|BAG34877.1| unnamed protein product [Homo sapiens]
gi|296488327|tpg|DAA30440.1| TPA: U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
gi|355747958|gb|EHH52455.1| hypothetical protein EGM_12900 [Macaca fascicularis]
gi|380813674|gb|AFE78711.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|383419121|gb|AFH32774.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|410208824|gb|JAA01631.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410256304|gb|JAA16119.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410288376|gb|JAA22788.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410353357|gb|JAA43282.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|431911774|gb|ELK13922.1| U6 snRNA-associated Sm-like protein LSm8 [Pteropus alecto]
gi|432103158|gb|ELK30417.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Myotis
davidii]
gi|440909990|gb|ELR59832.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos
grunniens mutus]
Length = 96
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 72 EIDEETD 78
>gi|302790966|ref|XP_002977250.1| hypothetical protein SELMODRAFT_417143 [Selaginella
moellendorffii]
gi|300155226|gb|EFJ21859.1| hypothetical protein SELMODRAFT_417143 [Selaginella
moellendorffii]
Length = 103
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP-LGLYVIRGENVVLIGE 60
I V+ DGR ++G+L+ +DQ N++++ + ER+ + LGLY+IRG+N+ ++GE
Sbjct: 18 ISVITNDGRNIVGMLKGYDQATNLIIDESHERVYSTTTGVEQHVLGLYIIRGDNIAVVGE 77
Query: 61 LDLEKE 66
LD E E
Sbjct: 78 LDDEME 83
>gi|154288024|ref|XP_001544807.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408448|gb|EDN03989.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 94
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+L+L DGR L+G L S DQ N+VL ERII + + GLY+IRG+NVV
Sbjct: 6 KVLILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLYLIRGDNVV 65
Query: 57 LIGELDLE 64
+ GE+D E
Sbjct: 66 ICGEVDEE 73
>gi|355706179|gb|AES02561.1| LSM8-like protein, U6 small nuclear RNA associated [Mustela
putorius furo]
Length = 99
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 16 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 75
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 76 EIDEETD 82
>gi|449481053|ref|XP_004177250.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Taeniopygia guttata]
Length = 96
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 72 EIDEETD 78
>gi|399216101|emb|CCF72789.1| unnamed protein product [Babesia microti strain RI]
Length = 99
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP-----LGLYVIRGENV 55
+LV+ DGR +G L FDQ N++L + ER+ C+ P LGL+VIRG+NV
Sbjct: 12 TVLVVTYDGRVFVGSLEGFDQLTNLILNQSEERV----YRCNSPVERLKLGLFVIRGDNV 67
Query: 56 VLIGELDLEKEELPAHMTCVSTAEIKRAQKA 86
VLIGE+D E + + +S + I A
Sbjct: 68 VLIGEVDNEL-DFSTNFDQISASAIGPVGNA 97
>gi|121543869|gb|ABM55599.1| U6 snRNA-associated Sm-like protein [Maconellicoccus hirsutus]
Length = 95
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+ ++ DGR +G L+ FDQ NV+L+ + ER+ + + + LGL++IRG+NVV++GE
Sbjct: 12 VTIITADGRHFVGTLKGFDQTLNVILDDSHERVYSTNQGVEQVVLGLHIIRGDNVVIVGE 71
Query: 61 LD 62
+D
Sbjct: 72 ID 73
>gi|320170227|gb|EFW47126.1| hypothetical protein CAOG_05070 [Capsaspora owczarzaki ATCC
30864]
Length = 95
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL-YCDIPLGLYVIRGENVVLIG 59
K+LV DGR +G LR FDQ N++LE ER + LGLY+I+GEN+ ++G
Sbjct: 11 KVLVATTDGRIFVGTLRGFDQMCNIILEHTVEREFNAQRGVVIVALGLYIIKGENIAVVG 70
Query: 60 ELDLEKEE 67
+D E +E
Sbjct: 71 SVDPEIDE 78
>gi|15218779|ref|NP_176747.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|79320777|ref|NP_001031238.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|17979539|gb|AAL50104.1| At1g65700/F1E22_3 [Arabidopsis thaliana]
gi|20334918|gb|AAM16215.1| At1g65700/F1E22_3 [Arabidopsis thaliana]
gi|21592627|gb|AAM64576.1| small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
gi|332196292|gb|AEE34413.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|332196293|gb|AEE34414.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
Length = 98
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGE 60
I V+ DGR ++G+L+ FDQ N++L+ + ER+ + LGLY+IRG+N+ +IGE
Sbjct: 15 ISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGVIGE 74
Query: 61 LDLEKEELPAHM 72
LD EEL A +
Sbjct: 75 LD---EELDASL 83
>gi|118082191|ref|XP_416009.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 2 [Gallus gallus]
gi|326911334|ref|XP_003202015.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Meleagris gallopavo]
Length = 96
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 72 EIDEETD 78
>gi|425767233|gb|EKV05807.1| U6 snrna-associated sm-like protein, putative [Penicillium
digitatum PHI26]
gi|425780084|gb|EKV18104.1| U6 snrna-associated sm-like protein, putative [Penicillium
digitatum Pd1]
Length = 108
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
K+L+L DGR L+G L S DQ N+VL ERII + +I GLY+IRG+NVV
Sbjct: 20 KVLILTVDGRTLIGDLLSTDQTTNLVLANTVERIIRTPDDDEPSTEIEHGLYLIRGDNVV 79
Query: 57 LIGELD 62
+ GE+D
Sbjct: 80 ICGEID 85
>gi|402871713|ref|XP_003899798.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Papio anubis]
Length = 96
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + LGLY++RG+NV +IG
Sbjct: 12 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVKQVVLGLYIVRGDNVAVIG 71
Query: 60 ELDLEKEEL 68
E+D E + +
Sbjct: 72 EIDEETDSV 80
>gi|258568848|ref|XP_002585168.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906614|gb|EEP81015.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 98
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
K+L+L DGR L G L S DQ N+VL ERII + ++ GLY+IRG+NVV
Sbjct: 10 KVLILTVDGRTLTGTLLSTDQLTNLVLSETVERIIRPPDDPEPSSEVDHGLYLIRGDNVV 69
Query: 57 LIGELDLE 64
+ GE+D E
Sbjct: 70 ICGEIDEE 77
>gi|115465821|ref|NP_001056510.1| Os05g0594900 [Oryza sativa Japonica Group]
gi|55733874|gb|AAV59381.1| unknown protein [Oryza sativa Japonica Group]
gi|113580061|dbj|BAF18424.1| Os05g0594900 [Oryza sativa Japonica Group]
Length = 99
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGE 60
I V+ DGR ++G LR FDQ N++L+ + ER+ + + LGLY+IRG+N+ ++GE
Sbjct: 16 ISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTREGVQQLVLGLYIIRGDNISVVGE 75
Query: 61 LDLEKEELPAHM 72
+D EEL A +
Sbjct: 76 VD---EELDARL 84
>gi|225708270|gb|ACO09981.1| U6 snRNA-associated Sm-like protein LSm8 [Osmerus mordax]
Length = 96
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVAIITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 72 EIDEETD 78
>gi|357132320|ref|XP_003567778.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Brachypodium distachyon]
Length = 99
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGE 60
I V+ DGR ++G LR FDQ N++L+ + ER+ + + LGLY+IRG+N+ ++GE
Sbjct: 16 ISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNIGVVGE 75
Query: 61 LDLEKEELPAHM 72
+D EEL A +
Sbjct: 76 VD---EELDAAL 84
>gi|302763963|ref|XP_002965403.1| hypothetical protein SELMODRAFT_83281 [Selaginella
moellendorffii]
gi|300167636|gb|EFJ34241.1| hypothetical protein SELMODRAFT_83281 [Selaginella
moellendorffii]
Length = 91
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP-LGLYVIRGENVVLIGE 60
I V+ DGR ++G+L+ +DQ N++++ + ER+ + LGLY+IRG+N+ ++GE
Sbjct: 6 ISVITNDGRNIVGMLKGYDQATNLIIDESHERVYSTTTGVEQHVLGLYIIRGDNIAVVGE 65
Query: 61 LDLEKEELPAHMTCVSTAEIKRAQKA 86
LD E E +T + +K Q
Sbjct: 66 LDDEMES-TLDLTAIKAHPLKPIQHG 90
>gi|317155545|ref|XP_003190622.1| small nuclear ribonucleoprotein (LSM8) [Aspergillus oryzae RIB40]
Length = 98
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+LVL DGR LLG L S DQ N+VL ERII + I GLY+IRG+NVV
Sbjct: 10 KVLVLTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVV 69
Query: 57 LIGELD 62
+ GE+D
Sbjct: 70 VCGEVD 75
>gi|354486322|ref|XP_003505330.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cricetulus griseus]
Length = 121
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 37 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 96
Query: 60 ELDLEKEE 67
E+D E +
Sbjct: 97 EIDEETDS 104
>gi|109077418|ref|XP_001087356.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Macaca mulatta]
Length = 96
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L + ER+ + LGLY++RG+NV +IG
Sbjct: 12 TVAVITSDGRMIVGTLKGFDQTINLILNESHERVFSSSQGVKQVVLGLYIVRGDNVAVIG 71
Query: 60 ELDLEKEEL 68
E+D E + +
Sbjct: 72 EIDEETDSV 80
>gi|196004032|ref|XP_002111883.1| hypothetical protein TRIADDRAFT_23559 [Trichoplax adhaerens]
gi|190585782|gb|EDV25850.1| hypothetical protein TRIADDRAFT_23559, partial [Trichoplax
adhaerens]
Length = 84
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-GDLYCDIPLGLYVIRGENVVLIGE 60
+ V+ +DGR ++G L+ FDQ N++L + ER+ G + LGLYVIRG+N+ +IGE
Sbjct: 1 VSVITQDGRVIVGTLKGFDQTVNLILNDSHERVYSSGAGVEQVALGLYVIRGDNIAVIGE 60
Query: 61 LD 62
+D
Sbjct: 61 ID 62
>gi|147904722|ref|NP_001084715.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Xenopus
laevis]
gi|46329906|gb|AAH68881.1| MGC82379 protein [Xenopus laevis]
Length = 96
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVAVITADGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 72 EIDEETD 78
>gi|307111678|gb|EFN59912.1| hypothetical protein CHLNCDRAFT_132948 [Chlorella variabilis]
Length = 101
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+ V+ DGR ++G LR +DQ N++L+ ER+ + + LGLYVIRG+N+ +IGE
Sbjct: 18 VSVITNDGRTIVGTLRGYDQATNLILDECHERVYSSKNGVEQLVLGLYVIRGDNIAVIGE 77
Query: 61 LDLEKE 66
+D +K+
Sbjct: 78 IDDDKD 83
>gi|156053235|ref|XP_001592544.1| hypothetical protein SS1G_06785 [Sclerotinia sclerotiorum 1980]
gi|154704563|gb|EDO04302.1| hypothetical protein SS1G_06785 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 98
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
K+L+L D R L+G L S DQ N+VL ERII + ++P GLY+IRG+NVV
Sbjct: 10 KVLILTADSRTLVGTLLSCDQQTNLVLSQTIERIIRPPEDPEASSEVPHGLYLIRGDNVV 69
Query: 57 LIGELDLE 64
++G +D E
Sbjct: 70 VVGLVDEE 77
>gi|47210706|emb|CAF89998.1| unnamed protein product [Tetraodon nigroviridis]
Length = 99
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 15 TVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 74
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 75 EIDEETD 81
>gi|301610947|ref|XP_002935003.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like, partial [Xenopus (Silurana) tropicalis]
Length = 89
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 5 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 64
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 65 EIDEETD 71
>gi|255936991|ref|XP_002559522.1| Pc13g11030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584142|emb|CAP92172.1| Pc13g11030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 98
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
K+L+L DGR L+G L S DQ N+VL ERII + +I GLY+IRG+NVV
Sbjct: 10 KVLILTVDGRTLIGDLLSTDQTTNLVLANTVERIIRTPEDDEPSTEIEHGLYLIRGDNVV 69
Query: 57 LIGELD 62
+ GE+D
Sbjct: 70 VCGEID 75
>gi|348521232|ref|XP_003448130.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oreochromis niloticus]
gi|410918466|ref|XP_003972706.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Takifugu rubripes]
gi|432943853|ref|XP_004083300.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oryzias latipes]
Length = 96
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 72 EIDEETD 78
>gi|167519032|ref|XP_001743856.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777818|gb|EDQ91434.1| predicted protein [Monosiga brevicollis MX1]
Length = 92
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI---PLGLYVIRGENVVLI 58
+ + +DGR L G+L+ FDQ N++L ER+ L+ + P+GLY++RG+NV ++
Sbjct: 9 VTIATQDGRLLTGILKGFDQSTNLILNQCYERVF--SLHSGVEIVPMGLYIVRGDNVAVV 66
Query: 59 GELDLEKE 66
GE D E +
Sbjct: 67 GETDEETD 74
>gi|291238793|ref|XP_002739308.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8-like
[Saccoglossus kowalevskii]
Length = 96
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
I V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY+IRG+N+ ++G
Sbjct: 12 TISVVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIIRGDNIAVVG 71
Query: 60 ELDLEKEE 67
E+D E +
Sbjct: 72 EIDDETDN 79
>gi|355560937|gb|EHH17623.1| hypothetical protein EGK_14070 [Macaca mulatta]
Length = 96
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIGE 60
+ V+ DGR ++G L+ FDQ N++L + ER+ + LGLY++RG+NV +IGE
Sbjct: 13 VAVITSDGRMIVGTLKGFDQTINLILNESHERVFSSSQGVKQVVLGLYIVRGDNVAVIGE 72
Query: 61 LDLEKEE 67
+D E +
Sbjct: 73 IDEETDS 79
>gi|154314610|ref|XP_001556629.1| predicted protein [Botryotinia fuckeliana B05.10]
gi|347831950|emb|CCD47647.1| similar to small nuclear ribonucleoprotein Lsm8 [Botryotinia
fuckeliana]
Length = 98
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+L+L D R L+G L S DQ N+VL ERII + ++P GLY+IRG+NVV
Sbjct: 10 KVLILTADSRTLVGTLLSCDQQTNLVLSQTIERIIRPPEDIEASSEVPHGLYLIRGDNVV 69
Query: 57 LIGELDLE 64
++G +D E
Sbjct: 70 VVGLVDEE 77
>gi|226529351|ref|NP_001150391.1| LOC100284021 [Zea mays]
gi|194699348|gb|ACF83758.1| unknown [Zea mays]
gi|195638896|gb|ACG38916.1| LSM Sm-like protein family member [Zea mays]
gi|195642734|gb|ACG40835.1| LSM Sm-like protein family member [Zea mays]
gi|413946381|gb|AFW79030.1| LSM Sm-like protein family member [Zea mays]
Length = 99
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-GDLYCDIPLGLYVIRGENVVLIGE 60
I V+ DGR ++G LR FDQ N++L+ + ER+ + + LGLY+IRG+N+ ++GE
Sbjct: 16 ISVITNDGRNIVGTLRGFDQATNIILDESHERVYSRKEGVQQLVLGLYIIRGDNISVVGE 75
Query: 61 LDLE 64
+D E
Sbjct: 76 VDEE 79
>gi|429848447|gb|ELA23927.1| small nuclear ribonucleoprotein lsm8 [Colletotrichum
gloeosporioides Nara gc5]
Length = 99
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII----VGDLYCDIPLGLYVIRGENVV 56
K+L++ D R L+G L + DQ N+VL A ER+I G+ ++PLGLY++RG+NV
Sbjct: 11 KVLIVTVDSRILVGNLEAADQNTNLVLSNAQERVIQTPESGEPSVEVPLGLYLVRGDNVC 70
Query: 57 LIGELDLEKEE 67
+G +D + +E
Sbjct: 71 TVGLVDEQLDE 81
>gi|326666504|ref|XP_694374.3| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Danio rerio]
Length = 96
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVAIVTSDGRMIVGTLKGFDQAINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 72 EIDEETD 78
>gi|225563396|gb|EEH11675.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 120
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 23 ANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTCV-STAEIK 81
AN+VL+G ER+ G+L+ DI G+Y++RGENV+L+GE+ + H T + TA I
Sbjct: 7 ANLVLQGTVERLYAGNLFADIQRGIYLVRGENVLLLGEVSSQ------HSTGILLTASIG 60
Query: 82 RAQKAEKDATVLKGSMRKRME 102
+ Q +K+ + G + E
Sbjct: 61 QIQDLDKEDDIPTGYRQAPFE 81
>gi|168040498|ref|XP_001772731.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675956|gb|EDQ62445.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 98
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
I V+ DGR ++G+L+ FDQ N++L+ + ER+ + + LGL++IRG+N+ ++GE
Sbjct: 15 ISVITNDGRNIVGVLKGFDQATNLILDESHERVYSTKAGVEQVVLGLHIIRGDNIGVVGE 74
Query: 61 LDLEKEELPAHM 72
LD EEL +++
Sbjct: 75 LD---EELDSNL 83
>gi|405117913|gb|AFR92688.1| hypothetical protein CNAG_00557 [Cryptococcus neoformans var.
grubii H99]
Length = 95
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+ V+L+DGR ++G L+ +D N++L + ER + + IPLGLYVI+G+NV ++ E
Sbjct: 12 VQVILQDGRIIVGKLKGYDPRTNLILSDSVEREFSMEQGVEMIPLGLYVIKGDNVAVVAE 71
Query: 61 LDLEKE 66
LD EK+
Sbjct: 72 LDEEKD 77
>gi|115491675|ref|XP_001210465.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197325|gb|EAU39025.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 98
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+L+L DGR LLG L S DQ N+VL ERII + I GLY+IRG+NVV
Sbjct: 10 KVLILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVV 69
Query: 57 LIGELD 62
+ GE+D
Sbjct: 70 VCGEVD 75
>gi|258597306|ref|XP_001347926.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254832654|gb|AAN35839.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 147
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLIG 59
I + RD + LG+LR++DQ NV L E+IIV + + D+ +G +IRG+N+ G
Sbjct: 21 IFISSRDNKLYLGILRTYDQHGNVFLTHCVEKIIVPEKNYFSDVYVGNLIIRGDNIAYFG 80
Query: 60 ELDLEK 65
+D EK
Sbjct: 81 SVDEEK 86
>gi|260814225|ref|XP_002601816.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
gi|229287118|gb|EEN57828.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
Length = 96
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGE 60
+ V+ DGR ++G L+ FDQ N++L+ + ER+ G + LGLY+IRG+N+ ++GE
Sbjct: 13 VSVITSDGRMIVGTLKGFDQTTNLILDESHERVFSSGQGVEQVVLGLYIIRGDNIAVVGE 72
Query: 61 LD 62
+D
Sbjct: 73 ID 74
>gi|261203457|ref|XP_002628942.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces dermatitidis
SLH14081]
gi|239586727|gb|EEQ69370.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces dermatitidis
SLH14081]
gi|239608242|gb|EEQ85229.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces dermatitidis
ER-3]
gi|327349430|gb|EGE78287.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces dermatitidis
ATCC 18188]
Length = 98
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+++L DGR L+G L S DQ N+VL ERII + + GLY+IRG+NVV
Sbjct: 10 KVIILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLYLIRGDNVV 69
Query: 57 LIGELDLE 64
+ GE+D E
Sbjct: 70 ICGEVDEE 77
>gi|225716368|gb|ACO14030.1| U6 snRNA-associated Sm-like protein LSm8 [Esox lucius]
Length = 96
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVAVVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELD 62
E+D
Sbjct: 72 EID 74
>gi|428182006|gb|EKX50868.1| hypothetical protein GUITHDRAFT_157257 [Guillardia theta
CCMP2712]
Length = 96
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+ ++ DGR ++G L+ DQ NV+LE ER+ + + + LGLY++RG+N+ ++GE
Sbjct: 13 VSIITNDGRNIIGTLKGLDQKLNVILEECYERVFSKEAGVEQVTLGLYIVRGDNIAIVGE 72
Query: 61 LDLEKE 66
+D K+
Sbjct: 73 VDEHKD 78
>gi|321249860|ref|XP_003191600.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus gattii
WM276]
gi|317458067|gb|ADV19813.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
gattii WM276]
Length = 95
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+ V+L+DGR ++G L+ +D N++L + ER + + +PLGLYVI+G+NV ++ E
Sbjct: 12 VQVILQDGRVIVGKLKGYDPRTNLILSDSVEREFSMEQGVEMVPLGLYVIKGDNVAVVAE 71
Query: 61 LDLEKE 66
LD EK+
Sbjct: 72 LDEEKD 77
>gi|388510216|gb|AFK43174.1| unknown [Lotus japonicus]
Length = 98
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIG 59
+I V+ DGR ++G+L+ FDQ N++L+ + ER+ + I LGLY+IRG+N+ ++G
Sbjct: 14 QISVITNDGRNIVGILKGFDQATNIILDESHERVFSTKEGVQQIVLGLYIIRGDNISVVG 73
Query: 60 E 60
E
Sbjct: 74 E 74
>gi|403223040|dbj|BAM41171.1| U6 snRNA-associated sm-like protein [Theileria orientalis strain
Shintoku]
Length = 94
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR +G+L+ FDQ N+VL ER+ + + + LG+Y++RG+NVVL+G
Sbjct: 12 NVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPEAPVEELELGVYILRGDNVVLVG 71
Query: 60 ELDLE 64
E+DL+
Sbjct: 72 EVDLD 76
>gi|156097675|ref|XP_001614870.1| U6 snRNA-associated Sm-like protein LSm8 [Plasmodium vivax Sal-1]
gi|148803744|gb|EDL45143.1| U6 snRNA-associated Sm-like protein LSm8, putative [Plasmodium
vivax]
Length = 95
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+ILV+ D R G L+ FDQ N++L ERI L I LGLY+IRG+ V LIGE
Sbjct: 13 EILVITNDSRIFTGKLKGFDQTTNIILGNCYERIYKESLE-KISLGLYIIRGDTVTLIGE 71
Query: 61 LD 62
+D
Sbjct: 72 ID 73
>gi|296005102|ref|XP_002808886.1| u6 snRNA-associated Sm-like protein, putative [Plasmodium
falciparum 3D7]
gi|225632285|emb|CAX64164.1| u6 snRNA-associated Sm-like protein, putative [Plasmodium
falciparum 3D7]
Length = 95
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+ILV+ D R G L+ FDQ N++L G C I + I LG+Y+IRG+ V LIGE
Sbjct: 13 EILVITNDSRIFTGKLKGFDQTTNIIL-GNCHERIYKESMEKISLGVYIIRGDTVTLIGE 71
Query: 61 LD 62
+D
Sbjct: 72 ID 73
>gi|294659468|ref|XP_461847.2| DEHA2G06886p [Debaryomyces hansenii CBS767]
gi|199433986|emb|CAG90308.2| DEHA2G06886p [Debaryomyces hansenii CBS767]
Length = 99
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD---IPLGLYVIRGENVVL 57
K+ V+ D R G L+ FD NV++ ER+I D D IPLGLY++RG N+V
Sbjct: 11 KVRVITTDARLFEGTLQGFDNSTNVIINNCIERLIYPDEQDDNQEIPLGLYLMRGGNIVC 70
Query: 58 IGELD 62
IGE+D
Sbjct: 71 IGEVD 75
>gi|443922213|gb|ELU41689.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 112
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 15 LLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTC 74
L+ S D N+V+E ERI GD + DI G+Y+IRGENVVL+GE+ ++E+P
Sbjct: 13 LVESVD--TNLVMENTLERIYHGDAFADIRRGVYLIRGENVVLLGEVVNREDEVPLRPVP 70
Query: 75 VSTAEIKRAQKAEKDATV 92
+ Q+A+K V
Sbjct: 71 IEEIGYTHQQEADKRKQV 88
>gi|221053308|ref|XP_002258028.1| u6 snrna-associated sm-like protein [Plasmodium knowlesi strain
H]
gi|193807861|emb|CAQ38565.1| u6 snrna-associated sm-like protein, putative [Plasmodium
knowlesi strain H]
Length = 95
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+ILV+ D R G L+ FDQ N++L ERI L I LGLY+IRG+ V LIGE
Sbjct: 13 EILVITNDSRIFTGKLKGFDQTTNIILGNCYERIYKESLE-KISLGLYIIRGDTVTLIGE 71
Query: 61 LD 62
+D
Sbjct: 72 ID 73
>gi|389582364|dbj|GAB65102.1| U6 snRNA-associated Sm-like protein LSm8 [Plasmodium cynomolgi
strain B]
Length = 95
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+ILV+ D R G L+ FDQ N++L ERI L I LGLY+IRG+ V LIGE
Sbjct: 13 EILVITNDSRIFTGKLKGFDQTTNIILGNCYERIYKESLE-KISLGLYIIRGDTVTLIGE 71
Query: 61 LD 62
+D
Sbjct: 72 ID 73
>gi|388514443|gb|AFK45283.1| unknown [Lotus japonicus]
Length = 98
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIG 59
+I V+ DGR ++G+L+ FDQ N++L+ + ER+ + I LGLY+IRG+N+ ++G
Sbjct: 14 QISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQIVLGLYIIRGDNISVVG 73
Query: 60 E 60
E
Sbjct: 74 E 74
>gi|342879398|gb|EGU80649.1| hypothetical protein FOXB_08872 [Fusarium oxysporum Fo5176]
Length = 119
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII--VGDL--YCDIPLGLYVIRGENVV 56
K+L++ D R L+G L + DQ N+VL A ERII DL +PLGLY++RG+NV
Sbjct: 31 KVLIVTADSRILVGTLAACDQTTNLVLNNAVERIIRTPDDLEPSAQVPLGLYLVRGDNVC 90
Query: 57 LIGELD 62
IG +D
Sbjct: 91 SIGLVD 96
>gi|322784412|gb|EFZ11383.1| hypothetical protein SINV_13023 [Solenopsis invicta]
Length = 102
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ N++L+ + ER+ + + LGL++IRG+NV ++G
Sbjct: 18 TVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNVAIVG 77
Query: 60 ELDLEKE 66
ELD E +
Sbjct: 78 ELDDEMD 84
>gi|358332137|dbj|GAA50846.1| U6 snRNA-associated Sm-like protein LSm8 [Clonorchis sinensis]
Length = 85
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGELD 62
V+ DGR ++G L+ FD N+V++ + ER+ + +PLGL++IRG+NV L+GE+D
Sbjct: 4 VITADGRTIVGTLKGFDNVINLVIKDSQERVFSPTEGVEQVPLGLFIIRGQNVALVGEID 63
>gi|389583785|dbj|GAB66519.1| LSM domain containing protein [Plasmodium cynomolgi strain B]
Length = 149
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--LYCDIPLGLYVIRGENVVLIG 59
I + RD + LG+LR++DQ N+ L E+IIV D + D+ +G +IRG+N+ G
Sbjct: 21 IFISSRDNKLYLGILRTYDQHGNIFLTHCVEKIIVPDRNYFSDVYVGNLIIRGDNIAYFG 80
Query: 60 ELDLEK 65
+D +K
Sbjct: 81 SVDEDK 86
>gi|340914656|gb|EGS17997.1| U6 snrna-associated sm-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 98
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
K+ V+ +GR ++G L + D N+VL+GA ER+I + ++PLGLY+IRG+ V
Sbjct: 11 KVCVITIEGRTIVGTLVAHDHNTNIVLKGAVERVIRTPDDPEPSVEVPLGLYMIRGDTVC 70
Query: 57 LIGELD 62
++G +D
Sbjct: 71 VVGHVD 76
>gi|50546088|ref|XP_500571.1| YALI0B06534p [Yarrowia lipolytica]
gi|49646437|emb|CAG82802.1| YALI0B06534p [Yarrowia lipolytica CLIB122]
Length = 97
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR +LG+L+ +DQ NV+L ER+I D + + LGLY++RG+ + +G
Sbjct: 11 PVTVITTDGRLILGILQGYDQATNVILSNTRERVITPDEPTEVVDLGLYMLRGDCIACVG 70
Query: 60 ELDLE 64
E DLE
Sbjct: 71 ETDLE 75
>gi|66533783|ref|XP_624537.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Apis mellifera]
gi|340726388|ref|XP_003401541.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Bombus terrestris]
gi|350423978|ref|XP_003493651.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Bombus impatiens]
gi|380024341|ref|XP_003695959.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Apis florea]
gi|383847985|ref|XP_003699633.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Megachile rotundata]
Length = 96
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ N++L+ + ER+ + + LGL++IRG+NV ++G
Sbjct: 12 TVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNVAIVG 71
Query: 60 ELDLEKE 66
ELD E +
Sbjct: 72 ELDDEMD 78
>gi|307203833|gb|EFN82769.1| U6 snRNA-associated Sm-like protein LSm8 [Harpegnathos saltator]
Length = 96
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR +G L+ FDQ N++L+ + ER+ + + LGL++IRG+N+ ++G
Sbjct: 12 TVSVITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNIAIVG 71
Query: 60 ELDLE 64
ELD E
Sbjct: 72 ELDDE 76
>gi|156098687|ref|XP_001615359.1| LSM domain containing protein [Plasmodium vivax Sal-1]
gi|148804233|gb|EDL45632.1| LSM domain containing protein [Plasmodium vivax]
Length = 256
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC--DIPLGLYVIRGENVVLIG 59
I + RD + LG+LR++DQ N+ L E+IIV D C D+ +G +IRG+N+ G
Sbjct: 128 IFISSRDNKLYLGILRTYDQHGNIFLTHCVEKIIVPDRNCFSDVYVGNLIIRGDNIAYFG 187
Query: 60 ELDLEK 65
+D +K
Sbjct: 188 SVDEDK 193
>gi|308806556|ref|XP_003080589.1| Small Nuclear ribonucleoprotein splicing factor (ISS)
[Ostreococcus tauri]
gi|116059050|emb|CAL54757.1| Small Nuclear ribonucleoprotein splicing factor (ISS)
[Ostreococcus tauri]
Length = 110
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENV 55
++ VL DGR ++G LR FDQ NV+LE ER+ + + PLG+Y+IRG+NV
Sbjct: 15 RVHVLTNDGRHVVGTLRGFDQVTNVILEDCAERVYSSESGVEEAPLGVYMIRGDNV 70
>gi|213513122|ref|NP_001135313.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Salmo
salar]
gi|209731702|gb|ACI66720.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732172|gb|ACI66955.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732248|gb|ACI66993.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|303665717|gb|ADM16200.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELD 62
E+D
Sbjct: 72 EID 74
>gi|157104024|ref|XP_001648223.1| small nuclear ribonucleoprotein, core, putative [Aedes aegypti]
gi|108880439|gb|EAT44664.1| AAEL003985-PA [Aedes aegypti]
Length = 162
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+ ++ DGR +G L+ FDQ N++L+ + ER+ + + + LGL++IRG+NV +IG+
Sbjct: 79 VSIITADGRNFVGTLKGFDQTINIILDESHERVYSMNAGIEQVVLGLHIIRGDNVAVIGQ 138
Query: 61 LD 62
LD
Sbjct: 139 LD 140
>gi|426195314|gb|EKV45244.1| hypothetical protein AGABI2DRAFT_194226 [Agaricus bisporus var.
bisporus H97]
Length = 95
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G++ FDQ +N+VL ER+ D +I LGLY+++G+ + LIG
Sbjct: 11 RVLLVLQDGRAIVGVMAGFDQRSNIVLSDCKERVFSMDEGVEEIALGLYLVKGDMISLIG 70
Query: 60 ELDLE 64
ELD E
Sbjct: 71 ELDEE 75
>gi|409076971|gb|EKM77339.1| hypothetical protein AGABI1DRAFT_115264 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 95
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
++L++L+DGR ++G++ FDQ +N+VL ER+ D +I LGLY+++G+ + LIG
Sbjct: 11 RVLLVLQDGRAIVGVMAGFDQRSNIVLSDCKERVFSMDEGVEEIALGLYLVKGDMISLIG 70
Query: 60 ELDLE 64
ELD E
Sbjct: 71 ELDEE 75
>gi|443702849|gb|ELU00673.1| hypothetical protein CAPTEDRAFT_206003 [Capitella teleta]
Length = 96
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-GDLYCDIPLGLYVIRGENVVLIG 59
++ V+ DGR + G+++ FDQ N++L+ + ER+ G ++ LGLY+IRG+NV +IG
Sbjct: 12 QVSVITADGRVINGVMKGFDQAINLILDESHERVYSSGGGVEEVILGLYIIRGDNVAIIG 71
Query: 60 ELDLE 64
E+D E
Sbjct: 72 EVDEE 76
>gi|307174073|gb|EFN64760.1| U6 snRNA-associated Sm-like protein LSm8 [Camponotus floridanus]
Length = 85
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ N++L+ + ER+ + + LGL++IRG+NV ++G
Sbjct: 1 TVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNVAIVG 60
Query: 60 ELDLEKE 66
ELD E +
Sbjct: 61 ELDDEMD 67
>gi|209736546|gb|ACI69142.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELD 62
E+D
Sbjct: 72 EID 74
>gi|145239729|ref|XP_001392511.1| small nuclear ribonucleoprotein (LSM8) [Aspergillus niger CBS
513.88]
gi|134077023|emb|CAK39897.1| unnamed protein product [Aspergillus niger]
gi|350629638|gb|EHA18011.1| hypothetical protein ASPNIDRAFT_38383 [Aspergillus niger ATCC
1015]
Length = 98
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+ +L DGR LLG L S DQ N+VL ERII + I GLY+IRG+NVV
Sbjct: 10 KVCILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVV 69
Query: 57 LIGELD 62
L GE+D
Sbjct: 70 LCGEVD 75
>gi|224164763|ref|XP_002189792.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Taeniopygia guttata]
Length = 96
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY+ RG+NV +IG
Sbjct: 12 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIERGDNVAVIG 71
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 72 EIDEETD 78
>gi|71027589|ref|XP_763438.1| U6 snRNA-associated Sm-like protein LSm8 [Theileria parva strain
Muguga]
gi|68350391|gb|EAN31155.1| U6 snRNA-associated Sm-like protein LSm8, putative [Theileria
parva]
Length = 94
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ V+ DGR +G+L+ FDQ N+VL ER+ D + + LG+Y++RG+N+VL+G
Sbjct: 12 SVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIYLLRGDNIVLVG 71
Query: 60 ELDLE 64
E+D++
Sbjct: 72 EVDVD 76
>gi|242002636|ref|XP_002435961.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|215499297|gb|EEC08791.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|442754057|gb|JAA69188.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
gi|442754059|gb|JAA69189.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
Length = 96
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NVVL+G
Sbjct: 12 TVSIITADGRHIVGTLKGFDQTINLILDESHERVYSSAHGVEQVLLGLYIVRGDNVVLVG 71
Query: 60 ELDLE 64
++D E
Sbjct: 72 QVDDE 76
>gi|169806226|ref|XP_001827858.1| U6 snRNA-associated Sm-like protein LSm8 [Enterocytozoon bieneusi
H348]
gi|161779306|gb|EDQ31329.1| U6 snRNA-associated Sm-like protein LSm8 [Enterocytozoon bieneusi
H348]
Length = 136
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 59
++V+L+D L G L+S+DQ+ N+ L A +RI + Y + +G VIRG+ +V+I
Sbjct: 47 NVVVILKDNSLLYGTLKSYDQYNNISLNYAVQRIFHNNQYAEKMIGFIVIRGDTIVMIS 105
>gi|358372807|dbj|GAA89408.1| small nuclear ribonucleoprotein Lsm8 [Aspergillus kawachii IFO
4308]
Length = 105
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+ +L DGR LLG L S DQ N+VL ERII + I GLY+IRG+NVV
Sbjct: 17 KVCILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVV 76
Query: 57 LIGELD 62
L GE+D
Sbjct: 77 LCGEVD 82
>gi|46107166|ref|XP_380642.1| hypothetical protein FG00466.1 [Gibberella zeae PH-1]
Length = 132
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
K+L++ D R L+G + + DQ N+VL A ERII + +PLGLY++RG+NV
Sbjct: 30 KVLIVTADSRILVGTMAACDQTTNLVLNNAVERIIRTPDDSEPSAQVPLGLYLVRGDNVC 89
Query: 57 LIGELD 62
IG +D
Sbjct: 90 SIGLVD 95
>gi|156551834|ref|XP_001604291.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Nasonia vitripennis]
Length = 96
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ N++L+ + ER+ + + LGL++IRG+NV +IG
Sbjct: 12 TVSIITSDGRNFIGTLKGFDQTINLILDESHERVYSTTQGVEQVVLGLHIIRGDNVAVIG 71
Query: 60 ELDLE 64
ELD E
Sbjct: 72 ELDDE 76
>gi|242016169|ref|XP_002428708.1| lsm1, putative [Pediculus humanus corporis]
gi|212513379|gb|EEB15970.1| lsm1, putative [Pediculus humanus corporis]
Length = 96
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G LR FDQ N++L+ + ER+ + + LGL++IRG+NV +IG
Sbjct: 12 TVSIITSDGRNFVGTLRGFDQTINLILDESHERVYSQTQGIEQVVLGLHIIRGDNVAVIG 71
Query: 60 ELDLE 64
E+D E
Sbjct: 72 EMDDE 76
>gi|209733618|gb|ACI67678.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ + DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVATVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELD 62
E+D
Sbjct: 72 EID 74
>gi|193716261|ref|XP_001944890.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Acyrthosiphon pisum]
Length = 96
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ N++L+ + ER+ + + I LGL++IRG+NV +IG
Sbjct: 12 TVSIITSDGRNFVGTLKGFDQTINIILDDSHERVYSPNQGVEQIILGLHLIRGDNVAIIG 71
Query: 60 ELD 62
E+D
Sbjct: 72 EVD 74
>gi|408398656|gb|EKJ77785.1| hypothetical protein FPSE_02019 [Fusarium pseudograminearum
CS3096]
Length = 118
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
K+L++ D R L+G + + DQ N+VL A ERII + +PLGLY++RG+NV
Sbjct: 30 KVLIVTADSRILVGTMAACDQTTNLVLNNAVERIIRTPDDSEPSAQVPLGLYLVRGDNVC 89
Query: 57 LIGELD 62
IG +D
Sbjct: 90 SIGLVD 95
>gi|198428544|ref|XP_002121997.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm8
[Ciona intestinalis]
Length = 96
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+ ++ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY+IRG+NV ++GE
Sbjct: 13 VSIVTADGRMIVGTLKGFDQTVNLILDESHERVFSSSHGVEQVMLGLYIIRGDNVAVVGE 72
Query: 61 LD 62
+D
Sbjct: 73 VD 74
>gi|66770917|gb|AAY54770.1| IP05048p [Drosophila melanogaster]
Length = 81
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGE 53
K++VLLRDGR L+G LRS DQFAN+VL+ ERI VG + L+ RGE
Sbjct: 22 KLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGRRHSS--RSLHHSRGE 72
>gi|452003159|gb|EMD95616.1| hypothetical protein COCHEDRAFT_1209910 [Cochliobolus
heterostrophus C5]
Length = 98
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII--VGDLYC--DIPLGLYVIRGENVV 56
++ VL DGR ++GLL S D N+VL+ A ERII V + ++PLGLY+IRG++V
Sbjct: 10 RVSVLTVDGRTMVGLLHSCDGSMNLVLQEATERIIRPVEEEIPSEEVPLGLYIIRGDSVA 69
Query: 57 LIGELDLE 64
++G +D E
Sbjct: 70 VVGRVDEE 77
>gi|313227657|emb|CBY22804.1| unnamed protein product [Oikopleura dioica]
Length = 96
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ ++ DGR ++G+L+ DQ NVVL ER+ + LGLY+IRG+NV ++G
Sbjct: 12 KVEIVTNDGRVVVGILKGLDQVVNVVLANTEERVFTPEGVDRQALGLYLIRGDNVAVVGA 71
Query: 61 LDLEKEELPAHMTCVSTAEIK 81
+D E EL + + ++
Sbjct: 72 VD-ENTELGMDFSTIKAQQLP 91
>gi|116783050|gb|ABK22776.1| unknown [Picea sitchensis]
gi|116791884|gb|ABK26147.1| unknown [Picea sitchensis]
gi|148908711|gb|ABR17463.1| unknown [Picea sitchensis]
Length = 98
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
I V+ DGR ++G+L+ +DQ N++++ + ER+ + + LGLY+IRG+N+ ++GE
Sbjct: 15 ISVITNDGRNIVGILKGYDQATNLIMDESHERVYSTRTGVEQLVLGLYIIRGDNISVVGE 74
Query: 61 LD 62
LD
Sbjct: 75 LD 76
>gi|392575745|gb|EIW68877.1| hypothetical protein TREMEDRAFT_39244 [Tremella mesenterica DSM
1558]
Length = 94
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+ V+L DGR ++G LR +D N++L ER + +PLGLY+I+G+NV +IGE+
Sbjct: 12 VQVILYDGRVIVGKLRGYDPRTNLILSDCVEREYSLEGVEMVPLGLYMIKGDNVAIIGEM 71
Query: 62 DLEKE 66
D +K+
Sbjct: 72 DEDKD 76
>gi|451856356|gb|EMD69647.1| hypothetical protein COCSADRAFT_166623 [Cochliobolus sativus
ND90Pr]
Length = 98
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII--VGDLYC--DIPLGLYVIRGENVV 56
++ VL DGR ++GLL S D N+VL+ A ERII V + ++PLGLY+IRG++V
Sbjct: 10 RVSVLTVDGRTMVGLLHSCDGSMNLVLQEATERIIRPVEEEIPSEEVPLGLYIIRGDSVA 69
Query: 57 LIGELDLE 64
++G +D E
Sbjct: 70 VVGRVDEE 77
>gi|332024909|gb|EGI65097.1| U6 snRNA-associated Sm-like protein LSm8 [Acromyrmex echinatior]
Length = 96
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ N++L+ + ER+ + + LGL++IRG+NV ++G
Sbjct: 12 TVSIITSDGRNFIGTLKGFDQTINLILDESHERVYSTTQGVEQVVLGLHIIRGDNVAIVG 71
Query: 60 ELDLEKE 66
E+D E +
Sbjct: 72 EIDDEMD 78
>gi|357622254|gb|EHJ73807.1| hypothetical protein KGM_20501 [Danaus plexippus]
Length = 96
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL-YCDIPLGLYVIRGENVVLIG 59
+ V+ DGR +G L+ FDQ N++L+ + ER+ + LGL++IRG+N+ ++G
Sbjct: 12 TVSVITADGRNFIGTLKGFDQTINIILDESHERVFSSSTGVAQVVLGLHIIRGDNIAIVG 71
Query: 60 ELD 62
++D
Sbjct: 72 QID 74
>gi|84998226|ref|XP_953834.1| hypothetical protein [Theileria annulata]
gi|65304831|emb|CAI73156.1| hypothetical protein, conserved [Theileria annulata]
Length = 161
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--LYCDIPLGLYVIRGENVVLIG 59
I V LRD +GL +SFDQF N+V+ A ++I++ D + DI G VIRGE++
Sbjct: 25 IWVTLRDDTFYVGLFKSFDQFGNIVITDAVKKIVLNDKKSFSDIYCGYTVIRGESISYFC 84
Query: 60 ELDL 63
LD+
Sbjct: 85 ALDV 88
>gi|356554080|ref|XP_003545377.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Glycine max]
Length = 116
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
I V+ DGR +L +L+ FDQ N++L+ + ER+ + GLY+ RG+N+ ++GEL
Sbjct: 34 ISVITNDGRNILXVLKGFDQATNIILDESHERVYSTKEGVQLVFGLYINRGDNISVVGEL 93
Query: 62 DLEKEELPAHM 72
D E+L + M
Sbjct: 94 D---EDLDSSM 101
>gi|401882753|gb|EJT46997.1| u6 snRNA-associated sm-like protein lsm8 [Trichosporon asahii var.
asahii CBS 2479]
Length = 166
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
++V+L DGR ++G L+ D + N++L + ER D + I LGLY+I+G+NV LI E
Sbjct: 83 VIVILYDGRIIVGRLKGNDNYCNLILSDSVEREYSADKGVEMISLGLYMIKGDNVALIAE 142
Query: 61 LDLEKE 66
+D +K+
Sbjct: 143 VDEDKD 148
>gi|209731758|gb|ACI66748.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++ G+NVV+IG
Sbjct: 12 TVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVGGDNVVVIG 71
Query: 60 ELD 62
E+D
Sbjct: 72 EID 74
>gi|344301944|gb|EGW32249.1| hypothetical protein SPAPADRAFT_50817 [Spathaspora passalidarum
NRRL Y-27907]
Length = 101
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-----IPLGLYVIRGENV 55
K+ V+ D R G+L+ +D N++L+ ERI+ + D IPLGLY+IRG V
Sbjct: 11 KVHVITADARFFEGVLQGYDNSTNIILQDCIERILYSEEDVDEENQEIPLGLYIIRGGEV 70
Query: 56 VLIGELDLEKEELPAHMTCVSTAEIKRA 83
+GE+D PA + + +K +
Sbjct: 71 ACVGEID------PAKYATIDWSTLKAS 92
>gi|328865684|gb|EGG14070.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 145
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL-YCDIPLGLYVIRGENVVLIG 59
++LVL DGR ++G L DQ N++LE ERI D LG+++I+G++V +IG
Sbjct: 11 QVLVLTADGRNIVGTLIGLDQTTNIILEKCHERIYSPDEGVTKYNLGIHLIKGDDVAVIG 70
Query: 60 ELDLEKEELPAHMTCVSTAEIKRAQKAEKD 89
E+D E + + + + +I++ A D
Sbjct: 71 EIDQELDAIVVVVMTIDKFDIEKKAAASLD 100
>gi|333449461|gb|AEF33416.1| U6 snRNA-associated Sm-like protein LSm8 [Crassostrea ariakensis]
Length = 96
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY+IRG+NV +IG
Sbjct: 12 TVSIVTADGRIIVGTLKGFDQTINLILDESHERVFSTTQGVEQVILGLYIIRGDNVAVIG 71
Query: 60 ELD 62
E+D
Sbjct: 72 EID 74
>gi|209731736|gb|ACI66737.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IG
Sbjct: 12 TVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 EL 61
E+
Sbjct: 72 EI 73
>gi|70947410|ref|XP_743323.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56522766|emb|CAH80747.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 119
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 7 RDGRKLLGLLRSFDQFANVVLEGACERIIV--GDLYCDIPLGLYVIRGENVVLIGELDLE 64
RD + LG+LR++DQ N+ L E+II+ + + D+ +G +IRG+N+ G +D
Sbjct: 3 RDNKLYLGILRTYDQHGNIFLTHCVEKIIIPEQNYFSDVYVGNLIIRGDNIAYFGSIDES 62
Query: 65 KEELPAHMTCVSTAEIKRAQKAEK 88
K E M S +I + E
Sbjct: 63 KYE---KMFNYSQKDINENSQGEN 83
>gi|238606585|ref|XP_002396755.1| hypothetical protein MPER_02947 [Moniliophthora perniciosa FA553]
gi|215469902|gb|EEB97685.1| hypothetical protein MPER_02947 [Moniliophthora perniciosa FA553]
Length = 97
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 23 ANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKE-ELPAHMTCVSTAEIK 81
N+VLE ERI G+ + + GL++IRGENVVL+GE+DL++E E+P + E
Sbjct: 3 TNLVLEDTVERIYHGNAFAESWHGLFLIRGENVVLLGEIDLDQEDEVP-----LRQVEYN 57
Query: 82 RAQKAEKDATVLK 94
+ Q KD +K
Sbjct: 58 QLQPYHKDEIQVK 70
>gi|31240533|ref|XP_320680.1| AGAP011837-PA [Anopheles gambiae str. PEST]
gi|21288006|gb|EAA00327.1| AGAP011837-PA [Anopheles gambiae str. PEST]
Length = 95
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ NV+L+ + ER+ + + LGL++IRG+N+ +IG
Sbjct: 11 TVSIITADGRNFVGTLKGFDQTVNVILDESHERVYSMTAGIEQVVLGLHIIRGDNIAIIG 70
Query: 60 ELD 62
+LD
Sbjct: 71 QLD 73
>gi|378729237|gb|EHY55696.1| hypothetical protein HMPREF1120_03821 [Exophiala dermatitidis
NIH/UT8656]
Length = 98
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
K+LV+ DGR L+G L S DQ N+VL ERII + + GLY++RG+N+
Sbjct: 10 KVLVITVDGRTLVGTLLSCDQVTNIVLNDTVERIIRPTDDPEPSSQVSHGLYLVRGDNIT 69
Query: 57 LIGELDLE 64
++G +D E
Sbjct: 70 IVGLVDEE 77
>gi|170060880|ref|XP_001865997.1| LSM8 protein [Culex quinquefasciatus]
gi|167879234|gb|EDS42617.1| LSM8 protein [Culex quinquefasciatus]
Length = 95
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ N++L+ + ER+ + + LGL++IRG+NV +IG
Sbjct: 11 TVSIITADGRNFVGTLKGFDQTVNIILDESHERVYSMTAGIEQVVLGLHIIRGDNVAIIG 70
Query: 60 ELD 62
+LD
Sbjct: 71 QLD 73
>gi|170041123|ref|XP_001848324.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864689|gb|EDS28072.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 123
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGELD 62
++ DGR +G L+ FDQ N++L+ + ER+ + + LGL++IRG+NV +IG+LD
Sbjct: 14 IITADGRNFVGTLKGFDQTVNIILDESHERVYSMTAGIEQVVLGLHIIRGDNVAIIGQLD 73
>gi|396460512|ref|XP_003834868.1| hypothetical protein LEMA_P070110.1 [Leptosphaeria maculans JN3]
gi|312211418|emb|CBX91503.1| hypothetical protein LEMA_P070110.1 [Leptosphaeria maculans JN3]
Length = 219
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII----VGDLYCDIPLGLYVIRGENVV 56
++ VL DGR ++G L S D N+VL+ A ERII ++PLGLY++RG++V
Sbjct: 131 RVSVLTLDGRTMVGTLHSCDNSMNLVLQNAIERIIRPREEEVPSEEVPLGLYIVRGDSVA 190
Query: 57 LIGELDLE 64
++G LD E
Sbjct: 191 VVGRLDEE 198
>gi|449304976|gb|EMD00983.1| hypothetical protein BAUCODRAFT_118700 [Baudoinia compniacensis
UAMH 10762]
Length = 98
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII--VGDLYCDI--PLGLYVIRGENVV 56
K+ ++ DGR L G L S DQ NVVL+ ERII D I P GLY++RG+NVV
Sbjct: 10 KVCIITVDGRTLTGTLVSCDQVTNVVLKDTIERIIRPTDDEEPSIEQPHGLYLVRGDNVV 69
Query: 57 LIGELDLE 64
+ G +D E
Sbjct: 70 ICGLVDEE 77
>gi|319411566|emb|CBQ73610.1| related to LSM8-Component of small nuclear ribonucleoprotein
complexes involved in RNA processing and splicing
[Sporisorium reilianum SRZ2]
Length = 96
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+LV+ +DGR ++G LR D +++L + ERI D + +PLGLY++RG+++ L+G
Sbjct: 11 HVLVITQDGRVIVGTLRGSDAVGSIILASSVERIFSADEGVEEVPLGLYILRGDSICLVG 70
>gi|403221300|dbj|BAM39433.1| uncharacterized protein TOT_010000889 [Theileria orientalis strain
Shintoku]
Length = 162
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--LYCDIPLGLYVIRGENVVLIG 59
I V LRD +GL +SFDQF N+V+ A ++I++ + DI G VIRGE++
Sbjct: 25 IWVTLRDDTFYVGLFKSFDQFGNIVITDAVKKIVISSKRSFSDIYCGYTVIRGESISYFC 84
Query: 60 ELD-LEKEELPAHMTCVSTAEIKRAQK 85
+D + L + + V T + R K
Sbjct: 85 SIDAIAYLNLFNYDSFVDTGWVSRLYK 111
>gi|358387144|gb|EHK24739.1| hypothetical protein TRIVIDRAFT_30919 [Trichoderma virens Gv29-8]
Length = 99
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+L++ D R L+G L + D N+VL+GA ERII + ++PLGLY++RG+NV
Sbjct: 11 KVLIVTADSRILVGELAACDASTNLVLKGAVERIIRTPDDPEPSAEVPLGLYLVRGDNVC 70
Query: 57 LIGELD 62
+G +D
Sbjct: 71 SVGLVD 76
>gi|238882680|gb|EEQ46318.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 146
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD-----LYCDIPLGLYVIRGENV 55
K+ V+ D R G+L +D+ N++L ERII +IPLG+Y++RG +
Sbjct: 55 KVHVITSDARFFEGILEGYDKSTNIILSNCIERIIYSKDDEEGENQEIPLGVYIMRGNEI 114
Query: 56 VLIGELDLE 64
V +GE+D E
Sbjct: 115 VCVGEIDDE 123
>gi|402222121|gb|EJU02188.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 98
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
++L++L+DGR ++G L FD +++VL ER D + + LGLY+++G+ ++L+G
Sbjct: 11 RVLLILQDGRCIVGTLAGFDNRSDIVLSNCIERTYSPDEPVEEVSLGLYLVKGDMILLVG 70
Query: 60 ELDLEKE 66
ELD E E
Sbjct: 71 ELDTELE 77
>gi|428673171|gb|EKX74084.1| conserved hypothetical protein [Babesia equi]
Length = 168
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG------DLYCDIPLGLYVIRGENV 55
+ V LRD +GL +SFDQ+ N+V+ A ++IIV DLYC G VIRGE++
Sbjct: 31 VWVTLRDDTFYVGLFKSFDQYGNIVITDAVKKIIVNEKKSFSDLYC----GYTVIRGESI 86
Query: 56 VLIGELDL 63
+D+
Sbjct: 87 SYFCAIDV 94
>gi|221056216|ref|XP_002259246.1| hypothetical protein, conserved in Apicomplexan species
[Plasmodium knowlesi strain H]
gi|193809317|emb|CAQ40019.1| hypothetical protein, conserved in Apicomplexan species
[Plasmodium knowlesi strain H]
Length = 149
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLIG 59
I + RD + G+LR++DQ N+ L E+II+ + + DI +G +IRG+N+ G
Sbjct: 21 IFISSRDNKLYQGILRTYDQHGNIFLTHCVEKIIIPERNYFSDIYVGNLIIRGDNIAYFG 80
Query: 60 ELDLEK 65
+D +K
Sbjct: 81 SVDEDK 86
>gi|358398681|gb|EHK48032.1| hypothetical protein TRIATDRAFT_305784 [Trichoderma atroviride
IMI 206040]
Length = 99
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+L++ D R L+G L + D N+VL+ A ERII D ++PLGLY++RG+NV
Sbjct: 11 KVLIVTADSRILVGELAACDASTNLVLKNALERIIRTPDDPDPSAEVPLGLYLVRGDNVC 70
Query: 57 LIGELD 62
IG +D
Sbjct: 71 SIGLVD 76
>gi|328354479|emb|CCA40876.1| U6 snRNA-associated Sm-like protein LSm8 [Komagataella pastoris
CBS 7435]
Length = 98
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGELD 62
V+ DG+ + G+L+ FD N++LE A ER+ + + I LGL+++RG NVV IG +D
Sbjct: 14 VITSDGKLITGILQGFDVSTNIILEKAQERVFHLTEETQTIDLGLFLLRGNNVVCIGLVD 73
Query: 63 LEKEE 67
E+EE
Sbjct: 74 EEEEE 78
>gi|18312179|ref|NP_558846.1| small nuclear ribonucleoprotein (Sm-like) [Pyrobaculum aerophilum
str. IM2]
gi|18159615|gb|AAL63028.1| small nuclear ribonucleoprotein homolog (Sm-like) [Pyrobaculum
aerophilum str. IM2]
Length = 80
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV LRD ++ G+LRSFDQ N++LE A E II G++Y G V+RGENV+ I
Sbjct: 23 QVLVKLRDSHEIRGILRSFDQHVNLLLEDA-EEIIDGNVY---KRGTMVVRGENVLFISP 78
Query: 61 L 61
+
Sbjct: 79 V 79
>gi|340500920|gb|EGR27754.1| U6 snRNA-associated SM protein LSM8, putative [Ichthyophthirius
multifiliis]
Length = 106
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-PLGLYVIRGENVVLIG 59
K+ ++ DGR L+G+L+ DQ N VL ER+ + +GLYV+RG+NV LIG
Sbjct: 22 KVQIVTSDGRILVGILKGLDQALNSVLSECTERVYSLEQGVQFNKIGLYVLRGDNVCLIG 81
Query: 60 ELDLEKEELPAH 71
ELD + E+ A+
Sbjct: 82 ELDEDIEQNIAY 93
>gi|403355067|gb|EJY77101.1| hypothetical protein OXYTRI_01268 [Oxytricha trifallax]
Length = 319
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV--GDLYCDIPLGLYVIRGENVVLIG 59
+ V+ DGR +G L SFDQ N++L ERI + D+ + +G++ IRG+NV LI
Sbjct: 235 VNVITNDGRNFIGTLVSFDQKTNLILSACIERIYIENHDVQAE-EMGVFFIRGDNVCLIA 293
Query: 60 ELD 62
E+D
Sbjct: 294 EID 296
>gi|348671498|gb|EGZ11319.1| hypothetical protein PHYSODRAFT_519698 [Phytophthora sojae]
Length = 88
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIG 59
I V+ DGR ++G+L+ FDQ NV+L+ + ER+ + + + LGLY++RG+N+ +IG
Sbjct: 5 ISVITNDGRNIIGVLKGFDQCVNVILDDSFERVFSLKEPVEAVELGLYIVRGDNISVIG 63
>gi|14277786|pdb|1I8F|A Chain A, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277787|pdb|1I8F|B Chain B, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277788|pdb|1I8F|C Chain C, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277789|pdb|1I8F|D Chain D, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277790|pdb|1I8F|E Chain E, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277791|pdb|1I8F|F Chain F, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277792|pdb|1I8F|G Chain G, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|29726402|pdb|1LNX|A Chain A, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726403|pdb|1LNX|B Chain B, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726404|pdb|1LNX|C Chain C, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726405|pdb|1LNX|D Chain D, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726406|pdb|1LNX|E Chain E, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726407|pdb|1LNX|F Chain F, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726408|pdb|1LNX|G Chain G, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
Length = 81
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++LV LRD ++ G+LRSFDQ N++LE A E II G++Y G V+RGENV+ I
Sbjct: 23 QVLVKLRDSHEIRGILRSFDQHVNLLLEDA-EEIIDGNVY---KRGTMVVRGENVLFI 76
>gi|71033639|ref|XP_766461.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353418|gb|EAN34178.1| hypothetical protein TP01_0940 [Theileria parva]
Length = 162
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--LYCDIPLGLYVIRGENVVLIG 59
I V LRD +GL +SFDQF N+V+ A ++II+ + + DI G VIRGE++
Sbjct: 25 IWVTLRDDTFYVGLFKSFDQFGNIVITDAVKKIILNNKRSFSDIYCGYTVIRGESISYFC 84
Query: 60 ELD-LEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMR 98
+D + L + + V + + + K + GSM+
Sbjct: 85 AIDVILYLNLFNYESLVDRSWVNKLYNMAKVRGINYGSMK 124
>gi|387592500|gb|EIJ87524.1| hypothetical protein NEQG_02405 [Nematocida parisii ERTm3]
gi|387596986|gb|EIJ94606.1| hypothetical protein NEPG_00128 [Nematocida parisii ERTm1]
Length = 105
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
I V+LRD + G+LRS+DQ+ N++LE + +I + Y ++RGEN++L+GE
Sbjct: 22 IFVVLRDNTYIKGILRSYDQYYNILLEDITQYVISNNEYLLTESESVLLRGENIILLGE 80
>gi|66770947|gb|AAY54785.1| IP05148p [Drosophila melanogaster]
Length = 99
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG 37
K++VLLRDGR L+G LRS DQFAN+VL+ ERI G
Sbjct: 37 KLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIPCG 73
>gi|384251155|gb|EIE24633.1| hypothetical protein COCSUDRAFT_53022 [Coccomyxa subellipsoidea
C-169]
Length = 99
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD--IPLGLYVIRGENVVLI 58
I V+ DGR ++G+LR +DQ N++L+ ER+ + + GL+V+RG+N+ ++
Sbjct: 14 TISVITNDGRVIVGILRGYDQATNLILDECHERVYSSKAGVEQVVLGGLHVVRGDNIAVV 73
Query: 59 GELDLEKEE 67
GE+D E E+
Sbjct: 74 GEVDDEIEQ 82
>gi|209738386|gb|ACI70062.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR ++G L+ FDQ N++L+ + E + + + LGLY++RG+NV +IG
Sbjct: 12 TVAIVTSDGRMIVGTLKGFDQTINLILDESHECVFSSSQGVEQVVLGLYIVRGDNVAVIG 71
Query: 60 ELD 62
E+D
Sbjct: 72 EID 74
>gi|119872589|ref|YP_930596.1| like-Sm ribonucleoprotein, core [Pyrobaculum islandicum DSM 4184]
gi|119673997|gb|ABL88253.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
islandicum DSM 4184]
Length = 80
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV LRD ++ G+LRSFDQ N++L+ A E II G++Y G VIRGENV+ I
Sbjct: 23 QVLVKLRDSHEIRGILRSFDQHVNLLLDDA-EEIIDGNVY---KRGTIVIRGENVLFISP 78
Query: 61 L 61
+
Sbjct: 79 V 79
>gi|340521980|gb|EGR52213.1| predicted protein [Trichoderma reesei QM6a]
Length = 99
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVVL 57
+L++ D R L+G L + D N+VL+GA ERII + ++PLGLY++RG+NV
Sbjct: 12 VLIVTADSRILVGELAACDASTNLVLKGAVERIIRTPDDPEPSAEVPLGLYLVRGDNVCS 71
Query: 58 IGELD 62
+G +D
Sbjct: 72 VGLVD 76
>gi|238498242|ref|XP_002380356.1| small nuclear ribonucleoprotein Lsm8, putative [Aspergillus
flavus NRRL3357]
gi|220693630|gb|EED49975.1| small nuclear ribonucleoprotein Lsm8, putative [Aspergillus
flavus NRRL3357]
Length = 85
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 8 DGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVVLIGELD 62
DGR LLG L S DQ N+VL ERII + I GLY+IRG+NVV+ GE+D
Sbjct: 4 DGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVVVCGEVD 62
>gi|440465117|gb|ELQ34457.1| hypothetical protein OOU_Y34scaffold00765g3 [Magnaporthe oryzae
Y34]
gi|440480508|gb|ELQ61168.1| hypothetical protein OOW_P131scaffold01199g49 [Magnaporthe oryzae
P131]
Length = 153
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 18/98 (18%)
Query: 24 NVVLEGACERIIVGD--------LYCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTCV 75
N+VL+ ER+ V LY DI GL+++RGENV+L+GE+DL+K++ P
Sbjct: 51 NLVLQSTVERLFVPPSPSTGERGLYADISRGLFLVRGENVLLLGEIDLDKDDDPP--AGY 108
Query: 76 STAEIK------RAQKAEKDATVLKGSMRKRMEFLDFD 107
AE++ +A+KAE A + S K++ L F+
Sbjct: 109 DKAELQVVESLLKARKAEDKAK--EKSRLKKLASLGFE 144
>gi|429962956|gb|ELA42500.1| hypothetical protein VICG_00599 [Vittaforma corneae ATCC 50505]
Length = 126
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 59
++VLL+D L G+ +S+DQ+ ++ L ERI Y + GL VIRGE+++ IG
Sbjct: 33 VVVLLKDDIYLYGVFKSYDQYNSITLNYVLERIFHEGAYAERRQGLMVIRGESIIFIG 90
>gi|91084979|ref|XP_972279.1| PREDICTED: similar to CG2021 CG2021-PA [Tribolium castaneum]
gi|270009009|gb|EFA05457.1| hypothetical protein TcasGA2_TC015638 [Tribolium castaneum]
Length = 96
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ NV+++ + ER+ + + LGL++IRG+NV ++G
Sbjct: 12 TVSIITSDGRNFIGTLKGFDQTINVIIDESHERVYSTTSGVEQVMLGLHIIRGDNVAIVG 71
Query: 60 ELDLE 64
+D E
Sbjct: 72 LIDDE 76
>gi|353237612|emb|CCA69581.1| hypothetical protein PIIN_03520 [Piriformospora indica DSM 11827]
Length = 98
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL-YCDIPLGLYVIRGENVVLIG 59
++L++++DGR ++G L +DQ +N+VL ER + D LG+Y+++G+ + L+G
Sbjct: 11 RVLLVMQDGRVIMGNLVGWDQRSNIVLADCVERRFSQESGATDSALGVYMVKGDQICLVG 70
Query: 60 ELDLEKEELPAHMTCVSTAEIK 81
E+D EE S +EIK
Sbjct: 71 EVDAAIEE------ATSWSEIK 86
>gi|354543302|emb|CCE40020.1| hypothetical protein CPAR2_100580 [Candida parapsilosis]
Length = 101
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-----IPLGLYVIRGENV 55
K+ V+ D R G+L FD+ N++L + ER+I D IP G+ ++RG +
Sbjct: 11 KVHVITTDARFFEGILEGFDKNTNIILSNSIERLIHSTQESDEANEAIPSGVNIMRGNEI 70
Query: 56 VLIGELDLE 64
V IGE+D E
Sbjct: 71 VCIGEIDEE 79
>gi|388580917|gb|EIM21228.1| hypothetical protein WALSEDRAFT_7029, partial [Wallemia sebi CBS
633.66]
Length = 80
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
K+L++ DGR L+G L+ +D +N++L + ER+ D + LGLY+I+G+N+V
Sbjct: 1 KLLLITTDGRCLIGHLQGYDNNSNIILSQSFERVFSSDQGVQTVDLGLYLIKGDNLVCAS 60
Query: 60 ELD 62
E+D
Sbjct: 61 EID 63
>gi|308163178|gb|EFO65538.1| Hypothetical protein GLP15_5215 [Giardia lamblia P15]
Length = 107
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENV 55
+LV+ G + G L +D F NV+L+ +RI G Y DIP+G ++RG+++
Sbjct: 22 PVLVVTAAGPQYFGTLTHYDGFGNVLLKDTAQRITNGTSYADIPMGWVLVRGDDI 76
>gi|171184523|ref|YP_001793442.1| like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
gi|170933735|gb|ACB38996.1| Like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
Length = 80
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV LRD ++ G+LRSFDQ N++L+ A E II G++Y G V+RGENV+ I
Sbjct: 23 QVLVKLRDSHEIRGILRSFDQHVNLLLDDA-EEIIDGNVY---KRGTIVVRGENVLFISP 78
Query: 61 L 61
+
Sbjct: 79 V 79
>gi|312380997|gb|EFR26852.1| hypothetical protein AND_25852 [Anopheles darlingi]
Length = 95
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G ++ FDQ N++L+ + ER+ + + LGL++IRG+NV +IG
Sbjct: 11 TVSIITADGRNFVGTMKGFDQTINIILDESHERVYSMSTGIEQVVLGLHIIRGDNVAIIG 70
Query: 60 ELD 62
LD
Sbjct: 71 LLD 73
>gi|302837889|ref|XP_002950503.1| hypothetical protein VOLCADRAFT_90948 [Volvox carteri f.
nagariensis]
gi|300264052|gb|EFJ48249.1| hypothetical protein VOLCADRAFT_90948 [Volvox carteri f.
nagariensis]
Length = 100
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI--PLGLYVIRGENVVLI 58
+I V+ DG+ +G+LR +DQ N++L+ ER+ I G+Y IRG+NV ++
Sbjct: 15 QISVITNDGKHYVGILRGYDQATNLLLQECQERVYSTKSGVQIIQNPGVYCIRGDNVAVV 74
Query: 59 GELDLEKEE 67
GE+D E +
Sbjct: 75 GEVDEEADS 83
>gi|346978215|gb|EGY21667.1| hypothetical protein VDAG_03107 [Verticillium dahliae VdLs.17]
Length = 99
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII----VGDLYCDIPLGLYVIRGENVV 56
K+L++ D R L+G L + D N+ L A ER+I + ++PLGLY++RG+NV
Sbjct: 11 KVLIITADSRILVGNLVASDNNTNLALSDAHERVIQTPDADEPSVEVPLGLYMVRGDNVC 70
Query: 57 LIGELD 62
IG +D
Sbjct: 71 TIGLVD 76
>gi|400602793|gb|EJP70391.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 99
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+L++ D R L+G+L + D N+VL A ERII + PLG+Y++RG+NV
Sbjct: 11 KVLIVTADSRILVGILTACDNSTNIVLSNAVERIIRTPDDPESSAIDPLGVYIVRGDNVC 70
Query: 57 LIGELD 62
IG +D
Sbjct: 71 SIGLVD 76
>gi|407918877|gb|EKG12139.1| hypothetical protein MPH_10770 [Macrophomina phaseolina MS6]
Length = 98
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV----GDLYCDIPLGLYVIRGENVV 56
KI ++ D R L+G L S DQ N+VL ERII + ++ GLY+IRG+NV
Sbjct: 10 KICIITVDSRTLIGTLLSCDQMTNLVLSDTWERIIRPADDPEPSSEVQHGLYLIRGDNVA 69
Query: 57 LIGELDLEKEELPAHM 72
L G +D EEL A +
Sbjct: 70 LCGLVD---EELDASI 82
>gi|145590308|ref|YP_001152310.1| like-Sm ribonucleoprotein, core [Pyrobaculum arsenaticum DSM
13514]
gi|379005411|ref|YP_005261083.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum
oguniense TE7]
gi|145282076|gb|ABP49658.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
arsenaticum DSM 13514]
gi|375160864|gb|AFA40476.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum
oguniense TE7]
Length = 80
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV LRD ++ G+LRSFDQ N++LE A E II G+++ G V+RGENV+ I
Sbjct: 23 QVLVKLRDSHEIRGVLRSFDQHVNLLLEDA-EEIIDGNVF---KRGTIVVRGENVLFISP 78
Query: 61 L 61
+
Sbjct: 79 V 79
>gi|146168016|ref|XP_001470817.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|146145232|gb|EDK31689.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 107
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENVVLIG 59
KI ++ DG+ L+G+L+ DQ N +L ER+ + I GLY++RG+N+ ++G
Sbjct: 24 KIQIITTDGKVLIGILKGLDQALNSILSDCVERVFSSENNTKTIKHGLYLLRGDNIAVLG 83
Query: 60 ELDLEKEE 67
E+D E E
Sbjct: 84 EVDEEIEN 91
>gi|448117816|ref|XP_004203349.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|448120256|ref|XP_004203932.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|359384217|emb|CCE78921.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|359384800|emb|CCE78335.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
Length = 101
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLY---CDIPLGLYVIRGENVVL 57
++ V+ D R G+L +D N++L+ ERII + I LGLY++RG NVV
Sbjct: 13 RVRVITTDARLFEGILEGYDNSTNIILKSCIERIINTSDHEHNQTIELGLYILRGGNVVC 72
Query: 58 IGELD 62
IGE+D
Sbjct: 73 IGEID 77
>gi|448532461|ref|XP_003870428.1| hypothetical protein CORT_0F00690 [Candida orthopsilosis Co
90-125]
gi|380354783|emb|CCG24298.1| hypothetical protein CORT_0F00690 [Candida orthopsilosis]
Length = 101
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-----IPLGLYVIRGENV 55
K+ V+ D R G+L FD+ N++L + ERII D IP G+ ++RG +
Sbjct: 11 KVHVITTDARFFEGVLEGFDKNTNIILSNSIERIIYSTQEIDETNEEIPSGVNIMRGNEI 70
Query: 56 VLIGELD 62
V IGE+D
Sbjct: 71 VCIGEID 77
>gi|159473465|ref|XP_001694854.1| Sm protein [Chlamydomonas reinhardtii]
gi|158276233|gb|EDP02006.1| Sm protein [Chlamydomonas reinhardtii]
Length = 100
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI--PLGLYVIRGENVVLI 58
++ V+ DG+ +G+LR +DQ N++L+ ER+ + G+Y IRG+NV ++
Sbjct: 15 QVTVITNDGKHYVGVLRGYDQTWNLLLQECQERVYSAKSGVQVIQNPGIYCIRGDNVAIV 74
Query: 59 GELDLEKE 66
GE+D E +
Sbjct: 75 GEVDEEAD 82
>gi|374327713|ref|YP_005085913.1| hypothetical protein P186_2269 [Pyrobaculum sp. 1860]
gi|356642982|gb|AET33661.1| hypothetical protein P186_2269 [Pyrobaculum sp. 1860]
Length = 57
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+LV LRD ++ G+LRSFDQ N++LE A E II G++Y G V+RGENV+ I +
Sbjct: 1 MLVKLRDSHEIRGILRSFDQHVNLLLEDA-EEIIDGNVYKR---GTVVVRGENVLFISPV 56
>gi|361128364|gb|EHL00305.1| putative U6 snRNA-associated Sm-like protein LSm1 [Glarea
lozoyensis 74030]
Length = 235
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Query: 23 ANVVLEGACERIIVGD------LYCDIPLGLYVIRGENVVLIGELDLEKEE 67
N+VL+ ERI + Y D P G++++RGENV+L+GE+DL+K++
Sbjct: 134 TNLVLQSTIERIFIPPTPSTPGYYADFPRGIFLVRGENVLLLGEIDLDKDD 184
>gi|392341147|ref|XP_003754265.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Rattus norvegicus]
gi|392348918|ref|XP_003750235.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Rattus norvegicus]
Length = 132
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC--DIPLGLYVIRGENVVLIGEL 61
V++ D R ++G L+ FDQ N+ L+ + E ++ + LGLY++RG+NV +IGE
Sbjct: 50 VIISDVRTIVGTLKGFDQTINLTLDESHEWLVFSSSQGVEQVVLGLYIVRGDNVAVIGER 109
Query: 62 DLEKEE 67
D E +
Sbjct: 110 DEETDS 115
>gi|255732651|ref|XP_002551249.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131535|gb|EER31095.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 98
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-------DIPLGLYVIRGE 53
K+ V+ D R G+L +D+ N++L ERII +IPLG+Y++RG
Sbjct: 5 KVHVITTDARFFEGILEGYDKSTNIILSNCIERIINSPEDEEEEEDNQEIPLGVYIMRGN 64
Query: 54 NVVLIGELDLE 64
VV IGE+ E
Sbjct: 65 EVVCIGEISDE 75
>gi|47201346|emb|CAF87885.1| unnamed protein product [Tetraodon nigroviridis]
Length = 139
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 24 NVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
N+V ERI VG + DIP G++++RGENVVL+GE+
Sbjct: 1 NLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEI 38
>gi|330930214|ref|XP_003302943.1| hypothetical protein PTT_14940 [Pyrenophora teres f. teres 0-1]
gi|311321410|gb|EFQ88979.1| hypothetical protein PTT_14940 [Pyrenophora teres f. teres 0-1]
Length = 98
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII----VGDLYCDIPLGLYVIRGENVV 56
K+ VL DGR ++G L S D N+VL+ A ERII ++PLGLY+IRG++V
Sbjct: 10 KVSVLTLDGRTMVGKLHSCDGSMNLVLQEAVERIIRPLEEEVPSEEVPLGLYIIRGDSVA 69
Query: 57 LIGELDLE 64
++G++D E
Sbjct: 70 VVGKVDEE 77
>gi|189203891|ref|XP_001938281.1| hypothetical protein PTRG_07949 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330924593|ref|XP_003300696.1| hypothetical protein PTT_12029 [Pyrenophora teres f. teres 0-1]
gi|187985380|gb|EDU50868.1| hypothetical protein PTRG_07949 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325030|gb|EFQ91212.1| hypothetical protein PTT_12029 [Pyrenophora teres f. teres 0-1]
Length = 84
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV L RK++G+LR +D + N+VL+ A E + G+ + +G+ VIRG VV++
Sbjct: 15 RVLVQLNGSRKVMGILRGYDVYLNIVLDDALEEVAGGE---KVRIGMVVIRGNAVVMLEA 71
Query: 61 LDLEKEELP 69
LD +++P
Sbjct: 72 LDRINQDVP 80
>gi|440290917|gb|ELP84216.1| lsm1, putative [Entamoeba invadens IP1]
Length = 94
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 7 RDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLEKE 66
DGR +G L +D +N+VL ER+ IP GL V+RG+ ++LIG LD +K+
Sbjct: 17 NDGRIFIGTLIGYDNPSNIVLRECIERVFSKSGVSVIPCGLLVLRGDEIILIGALDEQKD 76
Query: 67 E 67
Sbjct: 77 S 77
>gi|397601457|gb|EJK57913.1| hypothetical protein THAOC_22004 [Thalassiosira oceanica]
Length = 527
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+ VL DGR + G L +DQ N++L + ER+ D + + LGL+V+RG+NV +IG+
Sbjct: 13 VTVLTCDGRLITGTLAGYDQLQNLILSRSSERVYSVDSPVEVVELGLFVVRGDNVAIIGD 72
>gi|189205681|ref|XP_001939175.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975268|gb|EDU41894.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 98
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII----VGDLYCDIPLGLYVIRGENVV 56
K+ VL DGR ++G L S D N+VL+ A ERII ++PLGLY+IRG++V
Sbjct: 10 KVSVLTIDGRTMVGKLHSCDGSMNLVLQEAVERIIRPLEEEVPSEEVPLGLYIIRGDSVA 69
Query: 57 LIGELDLE 64
++G++D E
Sbjct: 70 VVGKVDEE 77
>gi|410988918|ref|XP_004000722.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Felis catus]
Length = 123
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ +GR ++G L+ FDQ N++L+G E++ + + LGLY + +NV +IG
Sbjct: 46 TVAIIPSNGRMIVGTLKGFDQTINLILDGNHEQVFSSSQGVELVVLGLYTVTSDNVAVIG 105
Query: 60 ELDLEKEE 67
E+D E +
Sbjct: 106 EIDEETDS 113
>gi|402864615|ref|XP_003896552.1| PREDICTED: ankyrin repeat and KH domain-containing protein
mask-like [Papio anubis]
Length = 504
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 13/76 (17%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV
Sbjct: 257 VAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVT---- 312
Query: 61 LDLEKEELPAHMTCVS 76
P H+ C +
Sbjct: 313 --------PLHLACAN 320
>gi|453089691|gb|EMF17731.1| splicing factor [Mycosphaerella populorum SO2202]
Length = 98
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+ ++L DGR ++G L S DQ N+ LEG ERII + + GL+++RG+NVV
Sbjct: 10 KVCLILVDGRCMVGKLISCDQVTNLALEGCVERIIRSPDDDEASEEEARGLFMVRGDNVV 69
Query: 57 LIGELDLEKEELPAHM--TCVSTAEIKRAQ 84
+ G +D EEL A + T V AEI +
Sbjct: 70 VCGLVD---EELDASIDWTKVRGAEIGSTK 96
>gi|195435808|ref|XP_002065871.1| GK20525 [Drosophila willistoni]
gi|194161956|gb|EDW76857.1| GK20525 [Drosophila willistoni]
Length = 95
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ N++++ ER+ + I LGL++IRG+N+ +IG
Sbjct: 11 TVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTAGTEQIVLGLHIIRGDNIAVIG 70
Query: 60 ELD 62
+D
Sbjct: 71 LID 73
>gi|119603941|gb|EAW83535.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|119603942|gb|EAW83536.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|344252438|gb|EGW08542.1| U6 snRNA-associated Sm-like protein LSm8 [Cricetulus griseus]
Length = 75
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 12 LLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGELDLEKE 66
++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IGE+D E +
Sbjct: 2 IVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETD 57
>gi|313222638|emb|CBY41662.1| unnamed protein product [Oikopleura dioica]
Length = 83
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 3 LVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L+ + + R ++G+L+ DQ NVVL ER+ + LGLY+IRG+NV ++G +D
Sbjct: 1 LLQISNKRVVVGILKGLDQVVNVVLANTEERVFTPEGVDRQALGLYLIRGDNVAVVGAVD 60
Query: 63 LEKEELPAHMTCVSTAEI 80
E EL + + ++
Sbjct: 61 -ENTELGMDFSTIKAQQL 77
>gi|241955685|ref|XP_002420563.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
gi|223643905|emb|CAX41642.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
Length = 102
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV-----GDLYCDIPLGLYVIRGENV 55
++ V+ D R G L +D+ N++L ERII G+ +I LG+Y++RG +
Sbjct: 11 RVHVITSDARFFEGKLEGYDKSTNIILSNCIERIIYSKDDEGEENEEISLGVYIMRGNEI 70
Query: 56 VLIGELDLE 64
V +GE+D E
Sbjct: 71 VCVGEIDDE 79
>gi|209882130|ref|XP_002142502.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209558108|gb|EEA08153.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 140
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL-YCDIPLGLYVIRGENVVLIG 59
+I V+LRD R+ G+ RSFDQ+ ++ LE E I Y I LG + RG++++L G
Sbjct: 35 EIYVILRDSRQFKGIFRSFDQYGSLCLEAVYEIISNSKQEYTQIYLGCMIFRGDSLMLCG 94
Query: 60 ELD 62
+D
Sbjct: 95 LID 97
>gi|315046146|ref|XP_003172448.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|327305055|ref|XP_003237219.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|311342834|gb|EFR02037.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|326460217|gb|EGD85670.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|326472004|gb|EGD96013.1| small nuclear ribonucleoprotein SmG [Trichophyton tonsurans CBS
112818]
gi|326477131|gb|EGE01141.1| small nuclear ribonucleoprotein SmG [Trichophyton equinum CBS
127.97]
Length = 78
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ +PLG+ VIRG +VV++
Sbjct: 15 RLFVQLNGNRKVIGVLRGYDVFMNIVLDDAVEEKNGGE---KVPLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|281350809|gb|EFB26393.1| hypothetical protein PANDA_005681 [Ailuropoda melanoleuca]
Length = 74
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 12 LLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGELDLEKE 66
L G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IGE+D E +
Sbjct: 1 LQGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETD 56
>gi|125976760|ref|XP_001352413.1| GA15189 [Drosophila pseudoobscura pseudoobscura]
gi|195170789|ref|XP_002026194.1| GL16212 [Drosophila persimilis]
gi|54641159|gb|EAL29909.1| GA15189 [Drosophila pseudoobscura pseudoobscura]
gi|194111074|gb|EDW33117.1| GL16212 [Drosophila persimilis]
Length = 95
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ N++++ ER+ + I LGL++IRG+N+ +IG
Sbjct: 11 TVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTSSGIEQIVLGLHIIRGDNIAVIG 70
Query: 60 ELD 62
+D
Sbjct: 71 LID 73
>gi|444520194|gb|ELV12928.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Tupaia
chinensis]
Length = 106
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGELD 62
V +R + G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IGE+D
Sbjct: 25 VAIRAQKCYQGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 84
Query: 63 LEKE 66
E +
Sbjct: 85 EETD 88
>gi|403256938|ref|XP_003921099.1| PREDICTED: ankyrin repeat domain-containing protein 7 [Saimiri
boliviensis boliviensis]
Length = 260
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 13/76 (17%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGE 60
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV
Sbjct: 13 VAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVT---- 68
Query: 61 LDLEKEELPAHMTCVS 76
P H+ C +
Sbjct: 69 --------PLHLACAN 76
>gi|126460744|ref|YP_001057022.1| LSM family small nuclear ribonucleoprotein [Pyrobaculum
calidifontis JCM 11548]
gi|126250465|gb|ABO09556.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
calidifontis JCM 11548]
Length = 80
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++LV LRD ++ G+L++FDQ N++L+ A E II G++Y G V+RGENV+ I
Sbjct: 23 QVLVKLRDSHEIRGILKAFDQHVNLLLDDA-EEIIDGNVY---KRGTIVVRGENVLFI 76
>gi|218197373|gb|EEC79800.1| hypothetical protein OsI_21233 [Oryza sativa Indica Group]
Length = 136
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 41/109 (37%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERI--------------------IVGDL-- 39
I V+ DGR ++G LR FDQ N++L+ + ER+ ++G L
Sbjct: 16 ISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTRYVLVNCDLLPGLLSNALIGSLVQ 75
Query: 40 ----------YC------DIPLGLYVIRGENVVLIGELDLEKEELPAHM 72
+C + LGLY+IRG+N+ ++GE+D EEL A +
Sbjct: 76 NSAISNKFLSWCLKEGVQQLVLGLYIIRGDNISVVGEVD---EELDARL 121
>gi|222632782|gb|EEE64914.1| hypothetical protein OsJ_19774 [Oryza sativa Japonica Group]
Length = 136
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 41/109 (37%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERI--------------------IVGDL-- 39
I V+ DGR ++G LR FDQ N++L+ + ER+ ++G L
Sbjct: 16 ISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTRYVLVNCDLLPGLLSNALIGSLVQ 75
Query: 40 ----------YC------DIPLGLYVIRGENVVLIGELDLEKEELPAHM 72
+C + LGLY+IRG+N+ ++GE+D EEL A +
Sbjct: 76 NSAISNKFLSWCLKDGVQQLVLGLYIIRGDNISVVGEVD---EELDARL 121
>gi|195125357|ref|XP_002007145.1| GI12774 [Drosophila mojavensis]
gi|193918754|gb|EDW17621.1| GI12774 [Drosophila mojavensis]
Length = 95
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGELD 62
++ DGR +G L+ FDQ N++++ ER+ + I LGL++IRG+N+ +IG +D
Sbjct: 14 IITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVIGLID 73
>gi|24655606|ref|NP_647660.1| CG2021 [Drosophila melanogaster]
gi|194747038|ref|XP_001955961.1| GF24963 [Drosophila ananassae]
gi|194864976|ref|XP_001971199.1| GG14562 [Drosophila erecta]
gi|195336718|ref|XP_002034980.1| GM14170 [Drosophila sechellia]
gi|195490564|ref|XP_002093192.1| GE20916 [Drosophila yakuba]
gi|195587050|ref|XP_002083278.1| GD13439 [Drosophila simulans]
gi|7292155|gb|AAF47567.1| CG2021 [Drosophila melanogaster]
gi|68051537|gb|AAY85032.1| IP05684p [Drosophila melanogaster]
gi|190623243|gb|EDV38767.1| GF24963 [Drosophila ananassae]
gi|190652982|gb|EDV50225.1| GG14562 [Drosophila erecta]
gi|194128073|gb|EDW50116.1| GM14170 [Drosophila sechellia]
gi|194179293|gb|EDW92904.1| GE20916 [Drosophila yakuba]
gi|194195287|gb|EDX08863.1| GD13439 [Drosophila simulans]
gi|220951344|gb|ACL88215.1| CG2021-PA [synthetic construct]
Length = 95
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGELD 62
++ DGR +G L+ FDQ N++++ ER+ + I LGL++IRG+N+ +IG +D
Sbjct: 14 IITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVIGLID 73
>gi|238595225|ref|XP_002393704.1| hypothetical protein MPER_06519 [Moniliophthora perniciosa FA553]
gi|215461593|gb|EEB94634.1| hypothetical protein MPER_06519 [Moniliophthora perniciosa FA553]
Length = 112
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 18/80 (22%)
Query: 1 KILVLLRDGRKLL-----------------GLLRSFDQFANVVLEGACERIIVGDLYCD- 42
++ ++L+DGR ++ G++ +DQ +NVVL + ER+ D +
Sbjct: 11 RVFLVLQDGRSIVASIHYQSPGSSFDFSSQGVMAGYDQKSNVVLSDSKERVYSMDEGVEE 70
Query: 43 IPLGLYVIRGENVVLIGELD 62
IP+GLY+++G+ ++LIGE+D
Sbjct: 71 IPVGLYLVKGDMIILIGEID 90
>gi|195011534|ref|XP_001983196.1| GH15765 [Drosophila grimshawi]
gi|193896678|gb|EDV95544.1| GH15765 [Drosophila grimshawi]
Length = 95
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ N++++ ER+ + I LGL++IRG+N+ +IG
Sbjct: 11 TVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTAGIEQIVLGLHIIRGDNIAVIG 70
Query: 60 ELD 62
+D
Sbjct: 71 LVD 73
>gi|156086694|ref|XP_001610756.1| LSM domain containing protein [Babesia bovis T2Bo]
gi|154798009|gb|EDO07188.1| LSM domain containing protein [Babesia bovis]
Length = 167
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG--DLYCDIPLGLYVIRGENVVLIG 59
I V LRD +G+ +SFDQ+ N+ L + ++IV ++ D+ G +IRGE++
Sbjct: 30 IWVTLRDETSYVGIFKSFDQYGNIFLTDSVRKVIVQAEGVFSDVYNGNLIIRGESIAYFC 89
Query: 60 ELDLEK 65
LD E
Sbjct: 90 SLDAES 95
>gi|195403403|ref|XP_002060279.1| GJ16072 [Drosophila virilis]
gi|194140618|gb|EDW57092.1| GJ16072 [Drosophila virilis]
Length = 95
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ ++ DGR +G L+ FDQ N++++ ER+ + I LGL++IRG+N+ +IG
Sbjct: 11 TVSIITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVIG 70
Query: 60 ELD 62
+D
Sbjct: 71 LID 73
>gi|183232189|ref|XP_001913674.1| U6 snRNA-associated Sm-like protein LSm8 [Entamoeba histolytica
HM-1:IMSS]
gi|169802157|gb|EDS89550.1| U6 snRNA-associated Sm-like protein LSm8, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407034977|gb|EKE37474.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449708988|gb|EMD48345.1| U6 snrnaassociated Sm family LSm8 protein [Entamoeba histolytica
KU27]
Length = 94
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V+ G+ +G+L +D F N+VL+ + ER + +I GL ++RG+ +++IG
Sbjct: 11 KVEVVTTLGKVYIGILTGYDNFMNIVLKNSIERTFSKEGVSNISCGLLILRGDEIMVIGG 70
Query: 61 LDLEKEELPAHMTCVSTAEIKRA 83
L+ EK+ CV + + +A
Sbjct: 71 LNEEKDT-QLDWQCVVSNPLSQA 92
>gi|281200600|gb|EFA74818.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 103
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENV 55
++LVL DGR ++G LR DQ NV+LE ERI + LG+++I+G++V
Sbjct: 14 RVLVLTADGRNIVGTLRGLDQMINVILEHCHERIYTDEGVEIFNLGVHIIKGDDV 68
>gi|417407452|gb|JAA50336.1| Putative small nuclear ribonucleoprotein splicing factor, partial
[Desmodus rotundus]
Length = 72
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 14 GLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGELDLEKE 66
G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IGE+D E +
Sbjct: 1 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETD 54
>gi|224005396|ref|XP_002296349.1| human U6 snRNA-associated protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
gi|209586381|gb|ACI65066.1| human U6 snRNA-associated protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 106
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ +L DGR + G+L +DQ N++L+ + E + D + + LGL+V+RG+NV ++G
Sbjct: 12 PVTILTCDGRLITGILLGYDQLQNLILQKSYESVYSSDSPVEKVELGLFVVRGDNVAVVG 71
Query: 60 E 60
+
Sbjct: 72 D 72
>gi|297299237|ref|XP_001090589.2| PREDICTED: u6 snRNA-associated Sm-like protein LSm1 isoform 1
[Macaca mulatta]
Length = 144
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVL-------EGACERIIVGDLYCD----IPLGLYV 49
K LVLLRDGR L+G LRS DQF + A VG +
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFEMPEFCLKDDDDDTALSNKTVGKKQQQQHELLSERFVA 76
Query: 50 IRGENVVLIGELDLEKEELPAHMTCVSTAEIKRAQKAEK 88
++G+ V+L+GE+DLEKE + VS EI Q+ E+
Sbjct: 77 VKGKRVLLVGEIDLEKES-DTPLQQVSIEEILEEQRVEQ 114
>gi|301096191|ref|XP_002897193.1| hypothetical protein PITG_16975 [Phytophthora infestans T30-4]
gi|262107278|gb|EEY65330.1| hypothetical protein PITG_16975 [Phytophthora infestans T30-4]
Length = 93
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENV 55
I V+ DGR ++G+L+ FDQ NV+L+ + ER+ + + + LGLY++RG+N+
Sbjct: 34 ISVITNDGRNIIGVLKGFDQCVNVILDDSFERVFSLKEPVEAVELGLYIVRGDNM 88
>gi|396471648|ref|XP_003838919.1| similar to small nuclear ribonucleoprotein G [Leptosphaeria
maculans JN3]
gi|312215488|emb|CBX95440.1| similar to small nuclear ribonucleoprotein G [Leptosphaeria
maculans JN3]
Length = 84
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV L RK++G+LR +D + N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RVLVQLNGSRKVMGILRGYDVYLNIVLDEALEEKAGGE---KVRIGMVVIRGNSVVMLEA 71
Query: 61 LDLEKEELP 69
LD +++P
Sbjct: 72 LDRINQDVP 80
>gi|399217457|emb|CCF74344.1| unnamed protein product [Babesia microti strain RI]
Length = 499
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--LYCDIPLGLYVIRGENVVLIG 59
I V LRD +G+ ++FDQ+ NVVL A ++I+V + ++ D+ G +IRGE++
Sbjct: 26 IWVSLRDDTFYVGIFKTFDQYGNVVLSDAVQKIVVPEKRIFSDLYNGHLIIRGESIAYFC 85
Query: 60 ELDLEK 65
+D +
Sbjct: 86 AIDTAR 91
>gi|237833195|ref|XP_002365895.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211963559|gb|EEA98754.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221488357|gb|EEE26571.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii GT1]
gi|221508860|gb|EEE34429.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii VEG]
Length = 96
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENV 55
K+ ++ DGR +G L+ FDQ N++L+ ERI D + I LGLY+IRG+N+
Sbjct: 12 KVEIVTVDGRVFVGTLKGFDQSTNLILDKCEERIYSVDAAVEQIALGLYLIRGDNI 67
>gi|256089000|ref|XP_002580607.1| lsm1 [Schistosoma mansoni]
gi|353231362|emb|CCD77780.1| putative lsm1, partial [Schistosoma mansoni]
Length = 72
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 14 GLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGELD 62
G L+ FD N+V++ + ER+ + +PLGL++IRG+NV ++GELD
Sbjct: 1 GTLKGFDNVVNLVIKDSHERVFSPTEGVEQVPLGLFIIRGQNVAVVGELD 50
>gi|352683089|ref|YP_004893613.1| putative snRNP Sm-like protein [Thermoproteus tenax Kra 1]
gi|350275888|emb|CCC82535.1| putative snRNP Sm-like protein [Thermoproteus tenax Kra 1]
Length = 79
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++LV LRDG ++ G+L+SFDQ N++LE A E ++ +++ G V+RGENV+ +
Sbjct: 23 RVLVKLRDGYEIRGILKSFDQHVNLLLEDA-EEVVDNNIF---KRGTMVVRGENVLFV 76
>gi|209878201|ref|XP_002140542.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209556148|gb|EEA06193.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 98
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--LYCDIPLGLYVIRGENVVLIG 59
+ VL DG+ +G L+ +DQ N++L E++ + + I LGL++IRG+++ LIG
Sbjct: 13 VSVLTTDGKVYIGSLKGYDQLTNIILAKCREKVYEANSKVIKYIELGLFLIRGDSIALIG 72
Query: 60 ELDLE 64
E++ E
Sbjct: 73 EIESE 77
>gi|346322383|gb|EGX91982.1| small nuclear ribonucleoprotein Lsm8, putative [Cordyceps militaris
CM01]
Length = 128
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 10/69 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP-------LGLYVIRGE 53
K+L++ D R L+G L + D N+VL A ERII D P LG+Y++RG+
Sbjct: 40 KVLIVTADSRILVGTLTACDNSTNIVLTNAIERIIRTP---DDPEPSAIDSLGVYIVRGD 96
Query: 54 NVVLIGELD 62
NV IG +D
Sbjct: 97 NVCSIGLVD 105
>gi|443924143|gb|ELU43214.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 74
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 14 GLLRSFDQFANVVLEGACERII-VGDLYCDIPLGLYVIRGENVVLIGELD 62
G L FDQ +NVVL + ERI + + ++PLGLY+++G+ + LIGE+D
Sbjct: 3 GTLVGFDQRSNVVLSDSVERIYSIEEGVEEVPLGLYLVKGDMIALIGEMD 52
>gi|327272990|ref|XP_003221266.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Anolis carolinensis]
Length = 67
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENV 55
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV
Sbjct: 12 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 67
>gi|213404670|ref|XP_002173107.1| small nuclear ribonucleoprotein [Schizosaccharomyces japonicus
yFS275]
gi|212001154|gb|EEB06814.1| small nuclear ribonucleoprotein [Schizosaccharomyces japonicus
yFS275]
Length = 77
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK+ G+LR +D F N+V+E A E G+ P+G IRG +V++I
Sbjct: 16 QVFVQLNGSRKVYGVLRGYDIFLNIVVEDAYEEKSTGE---KAPIGSAAIRGNSVIMIEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|350296589|gb|EGZ77566.1| Sm-like ribonucleoprotein [Neurospora tetrasperma FGSC 2509]
Length = 100
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+ ++ DGR L+G L S D NV L+ A ER+I + +I LG ++IRG+ V
Sbjct: 13 KVCIITVDGRTLVGTLISVDMSTNVFLQRAVERVIRSPDDDEPSAEIELGTHMIRGDTVC 72
Query: 57 LIGELDLEKEE 67
L+G +D +E
Sbjct: 73 LVGLVDESLDE 83
>gi|123445454|ref|XP_001311487.1| Sm protein [Trichomonas vaginalis G3]
gi|121893298|gb|EAX98557.1| Sm protein [Trichomonas vaginalis G3]
Length = 126
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
K+ V+ D + +G L SFDQF N++L A R + Y D LG IR + V+LIG
Sbjct: 47 KVCVITADDIEYVGELSSFDQFGNIILAKAVLRTFGPNGYDDEEKLGTIFIRSDQVILIG 106
Query: 60 ELDLEKE 66
++D +KE
Sbjct: 107 KVDKDKE 113
>gi|327273127|ref|XP_003221332.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Anolis carolinensis]
Length = 89
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENV 55
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV
Sbjct: 26 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 81
>gi|401408539|ref|XP_003883718.1| U6 snRNA-associated protein LSm8-like protein,related [Neospora
caninum Liverpool]
gi|325118135|emb|CBZ53686.1| U6 snRNA-associated protein LSm8-like protein,related [Neospora
caninum Liverpool]
Length = 115
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENV 55
K+ ++ DGR +G L+ FDQ N++L+ ERI D + I LGLY+IRG+N+
Sbjct: 12 KVEIVTVDGRVFVGTLKGFDQSTNLILDKCEERIYSLDAAVEQIALGLYLIRGDNI 67
>gi|451850030|gb|EMD63333.1| hypothetical protein COCSADRAFT_38193 [Cochliobolus sativus
ND90Pr]
gi|452001852|gb|EMD94311.1| hypothetical protein COCHEDRAFT_1170230 [Cochliobolus
heterostrophus C5]
Length = 84
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV L RK++G+LR +D + N+VL+ A E G+ + +G+ VIRG VV++
Sbjct: 15 RVLVQLNGSRKVMGILRGYDVYLNIVLDEALEEKAGGE---KVRIGMVVIRGNAVVMLEA 71
Query: 61 LDLEKEELP 69
LD +++P
Sbjct: 72 LDRINQDVP 80
>gi|323454589|gb|EGB10459.1| hypothetical protein AURANDRAFT_23509 [Aureococcus
anophagefferens]
Length = 107
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 11/75 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVI--------- 50
+I V+ DGR ++G LR +DQ NV+L+ ER+ D + + LGLY+I
Sbjct: 12 QISVITCDGRNIVGQLRGYDQVTNVILDECHERVFSLDAGVEQVVLGLYIIRGAPRRARI 71
Query: 51 -RGENVVLIGELDLE 64
R +N+ +IGE+D+E
Sbjct: 72 RRRDNIAVIGEVDIE 86
>gi|294888449|ref|XP_002772471.1| lsm1, putative [Perkinsus marinus ATCC 50983]
gi|294896670|ref|XP_002775673.1| lsm1, putative [Perkinsus marinus ATCC 50983]
gi|239876697|gb|EER04287.1| lsm1, putative [Perkinsus marinus ATCC 50983]
gi|239881896|gb|EER07489.1| lsm1, putative [Perkinsus marinus ATCC 50983]
Length = 113
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 11/68 (16%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP------LGLYVIRGEN 54
++L++ DG+ LLG FDQ NVVL ER+ Y + GLY++RG++
Sbjct: 29 EVLLVTADGKVLLGKFNGFDQSLNVVLSECKERV-----YSTVEGVETLHHGLYLVRGDD 83
Query: 55 VVLIGELD 62
VV IGE+D
Sbjct: 84 VVSIGEVD 91
>gi|351700996|gb|EHB03915.1| U6 snRNA-associated Sm-like protein LSm8 [Heterocephalus glaber]
Length = 123
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 12 LLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGELDLEKE 66
++G + FDQ N++L+ + ER+ + + LGLY++RG+NV +IGE+D E +
Sbjct: 3 VVGTFKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETD 58
>gi|296417819|ref|XP_002838548.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634491|emb|CAZ82739.1| unnamed protein product [Tuber melanosporum]
Length = 125
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 21/86 (24%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYV--IRGENVVLIGEL 61
V LRDGRKL+G+LRS+DQ L C +P Y +R NV+L+GE+
Sbjct: 29 VALRDGRKLIGVLRSWDQQT---------------LSCRVPSSAYTSGMR-TNVLLLGEI 72
Query: 62 DLEKE-ELPAHMTCVSTAEIKRAQKA 86
DL++E ++P V E+ AQ+A
Sbjct: 73 DLDREDDIPFRRASVE--EVFAAQRA 96
>gi|449481049|ref|XP_004177249.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Taeniopygia guttata]
Length = 132
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 14 GLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIGELDLEKEE 67
G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV +IGE+D E +
Sbjct: 61 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDS 115
>gi|398411265|ref|XP_003856974.1| hypothetical protein MYCGRDRAFT_19618, partial [Zymoseptoria
tritici IPO323]
gi|339476859|gb|EGP91950.1| hypothetical protein MYCGRDRAFT_19618 [Zymoseptoria tritici
IPO323]
Length = 89
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII----VGDLYCDIPLGLYVIRGENVV 56
K+ +LL DGR L+G L + D N+ LE ERII + + P GL+++RG+NVV
Sbjct: 2 KVCLLLTDGRCLIGDLIACDAVTNLALENCVERIIRSADEDEASEEEPRGLFMVRGDNVV 61
Query: 57 LIGELDLE 64
L G +D E
Sbjct: 62 LCGLVDEE 69
>gi|344229634|gb|EGV61519.1| hypothetical protein CANTEDRAFT_124295 [Candida tenuis ATCC
10573]
Length = 98
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII----VGDLYCDIPLGLYVIRGENVV 56
K+ V+ D R G L D N+V+ ERI D Y + +GLY++RG VV
Sbjct: 11 KVRVITTDARLFEGKLEGIDNATNIVISNCIERIARVKGTDDKYQQLDMGLYMLRGGTVV 70
Query: 57 LIGELDLEKEELPAHMTCVSTAEIKRAQKA 86
IGE+D E +P ++ ++K +
Sbjct: 71 CIGEVD---ESIPVDWENLTGDKLKDTKNP 97
>gi|363727561|ref|XP_003640398.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Gallus gallus]
Length = 80
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENV 55
+ V+ DGR ++G L+ FDQ N++L+ + ER+ + + LGLY++RG+NV
Sbjct: 12 TVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 67
>gi|299740998|ref|XP_001834148.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea
okayama7#130]
gi|298404507|gb|EAU87644.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea
okayama7#130]
Length = 107
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
KI V GR+++G+L+ +DQ N+VL+ E + + Y LGL V+RG + L+
Sbjct: 33 KIRVKFTGGREVIGVLKGYDQLLNLVLDEVEEEVSASNPYKKRSLGLVVLRGPTITLLSP 92
Query: 61 LD 62
+D
Sbjct: 93 VD 94
>gi|292656841|ref|YP_003536738.1| snRNP-like protein [Haloferax volcanii DS2]
gi|433417270|ref|ZP_20404659.1| snRNP-like protein [Haloferax sp. BAB2207]
gi|448290842|ref|ZP_21481987.1| snRNP-like protein [Haloferax volcanii DS2]
gi|448546215|ref|ZP_21626467.1| snRNP-like protein [Haloferax sp. ATCC BAA-646]
gi|448548214|ref|ZP_21627558.1| snRNP-like protein [Haloferax sp. ATCC BAA-645]
gi|448557401|ref|ZP_21632674.1| snRNP-like protein [Haloferax sp. ATCC BAA-644]
gi|448565365|ref|ZP_21636232.1| snRNP-like protein [Haloferax prahovense DSM 18310]
gi|448568277|ref|ZP_21637854.1| snRNP-like protein [Haloferax lucentense DSM 14919]
gi|448583315|ref|ZP_21646671.1| snRNP-like protein [Haloferax gibbonsii ATCC 33959]
gi|448600783|ref|ZP_21656162.1| snRNP-like protein [Haloferax alexandrinus JCM 10717]
gi|448606036|ref|ZP_21658615.1| snRNP-like protein [Haloferax sulfurifontis ATCC BAA-897]
gi|448622918|ref|ZP_21669567.1| snRNP-like protein [Haloferax denitrificans ATCC 35960]
gi|291371013|gb|ADE03240.1| snRNP homolog [Haloferax volcanii DS2]
gi|432200109|gb|ELK56223.1| snRNP-like protein [Haloferax sp. BAB2207]
gi|445577895|gb|ELY32315.1| snRNP-like protein [Haloferax volcanii DS2]
gi|445703058|gb|ELZ54994.1| snRNP-like protein [Haloferax sp. ATCC BAA-646]
gi|445714296|gb|ELZ66060.1| snRNP-like protein [Haloferax sp. ATCC BAA-644]
gi|445714916|gb|ELZ66674.1| snRNP-like protein [Haloferax sp. ATCC BAA-645]
gi|445715109|gb|ELZ66865.1| snRNP-like protein [Haloferax prahovense DSM 18310]
gi|445727227|gb|ELZ78841.1| snRNP-like protein [Haloferax lucentense DSM 14919]
gi|445729544|gb|ELZ81139.1| snRNP-like protein [Haloferax gibbonsii ATCC 33959]
gi|445734796|gb|ELZ86352.1| snRNP-like protein [Haloferax alexandrinus JCM 10717]
gi|445739453|gb|ELZ90960.1| snRNP-like protein [Haloferax sulfurifontis ATCC BAA-897]
gi|445753426|gb|EMA04843.1| snRNP-like protein [Haloferax denitrificans ATCC 35960]
Length = 76
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGAC-ERIIVGDLYCDIPLGLYVIRGENVVLI 58
+ VLL+DG G+L +DQ NVVLE A E + GD+ + +IRG+NVV I
Sbjct: 16 PVTVLLKDGNAYFGVLAGYDQHMNVVLEEALDEDTVPGDIELEQVQDTTIIRGDNVVTI 74
>gi|358390848|gb|EHK40253.1| hypothetical protein TRIATDRAFT_252624 [Trichoderma atroviride
IMI 206040]
Length = 83
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L GRK++G+LR +D F NVVL+ A E G+ I LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGGRKVIGVLRGYDVFLNVVLDEAVEEKDGGE---KIRLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|406608168|emb|CCH40602.1| Small nuclear ribonucleoprotein-associated protein [Wickerhamomyces
ciferrii]
Length = 113
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP-LGLYVIRGENVVLIG 59
K+ V+ DG+ +G+L FD N++L ER+I D I LGL VIRG+ V +G
Sbjct: 26 KVAVITTDGKYFVGILEGFDHLTNLILTETQERVIYQDEESIIEDLGLQVIRGDLVSCVG 85
Query: 60 ELDLEKEELPAHM--TCVSTAEIKRAQKA 86
+D EEL + T V A + + +K+
Sbjct: 86 LVD---EELDKQIDWTKVKGAPLVKTKKS 111
>gi|146418329|ref|XP_001485130.1| hypothetical protein PGUG_02859 [Meyerozyma guilliermondii ATCC
6260]
gi|146390603|gb|EDK38761.1| hypothetical protein PGUG_02859 [Meyerozyma guilliermondii ATCC
6260]
Length = 97
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV---GDLYCDIPLGLYVIRGENVVL 57
+ V+ D R G+L FD N++L E II + IPLG+Y +RG NVV
Sbjct: 14 SVRVITTDARLFEGILEGFDNSTNIILSSCYEHIIYEEEDEENQAIPLGVYFMRGGNVVC 73
Query: 58 IGE 60
IGE
Sbjct: 74 IGE 76
>gi|380091971|emb|CCC10238.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 100
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
++ ++ DGR L+G L S D NV L+ A ER+I + +I LG ++IRG+ V
Sbjct: 13 RVCIITVDGRTLVGTLISVDMSTNVFLQRAVERVIRSPDDDEPSAEIELGTHMIRGDTVC 72
Query: 57 LIGELD 62
L+G +D
Sbjct: 73 LVGLVD 78
>gi|169860675|ref|XP_001836972.1| hypothetical protein CC1G_00108 [Coprinopsis cinerea
okayama7#130]
gi|116501694|gb|EAU84589.1| hypothetical protein CC1G_00108 [Coprinopsis cinerea
okayama7#130]
Length = 78
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L+ GRK+ G LR +D F N+V++ A E G + P+G VIRG +V +
Sbjct: 16 KLFIHLQGGRKVSGTLRGYDLFLNLVIDDAVEETTPGQKH---PIGTVVIRGNSVTSMET 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|224004692|ref|XP_002295997.1| human U6 snRNA-associated Sm-like protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
gi|209586029|gb|ACI64714.1| human U6 snRNA-associated Sm-like protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 106
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVVLIG 59
+ +L DGR + G+L +DQ N++L+ + E + D + + LGL+V+RG+NV ++G
Sbjct: 12 PVTILTCDGRLITGILLGYDQLQNLILQKSYESVYSLDSPVEKVELGLFVVRGDNVAVVG 71
Query: 60 E 60
+
Sbjct: 72 D 72
>gi|393215720|gb|EJD01211.1| like-Sm ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 77
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V L+ GRK+ G LR FD F N+VL+ A E P+G VIRG +V L+
Sbjct: 16 KLFVHLQGGRKVSGTLRGFDIFLNLVLDDAIEETTPAQ---KSPIGNVVIRGNSVTLMET 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|452848209|gb|EME50141.1| hypothetical protein DOTSEDRAFT_20523 [Dothistroma septosporum
NZE10]
Length = 98
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVV 56
K+ ++L DGR ++G L S D N+ LE ERI+ + + P GL+++RG+NVV
Sbjct: 10 KVCLILVDGRCMVGNLISCDNVTNLALENCVERIVRSPDEDEASEEEPRGLFMVRGDNVV 69
Query: 57 LIGELDLEKEELPAHM--TCVSTAEIKRAQ 84
+ G +D EEL + T V AEI +
Sbjct: 70 VCGLVD---EELDGSIDWTKVKGAEIGTTK 96
>gi|169602875|ref|XP_001794859.1| hypothetical protein SNOG_04441 [Phaeosphaeria nodorum SN15]
gi|160706278|gb|EAT88201.2| hypothetical protein SNOG_04441 [Phaeosphaeria nodorum SN15]
Length = 84
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++LV L RK++G+LR +D + N+VL+ A E G+ +G+ VIRG VV++
Sbjct: 15 RVLVQLNGSRKVMGILRGYDVYLNIVLDEALEEKAGGE---KTRIGMVVIRGNAVVMLEA 71
Query: 61 LDLEKEELP 69
LD +++P
Sbjct: 72 LDRINQDVP 80
>gi|302694279|ref|XP_003036818.1| hypothetical protein SCHCODRAFT_47419 [Schizophyllum commune
H4-8]
gi|300110515|gb|EFJ01916.1| hypothetical protein SCHCODRAFT_47419 [Schizophyllum commune
H4-8]
Length = 77
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V L+ GRK+ G LR +D F N+V++ A E G + P+G VIRG +V +
Sbjct: 16 KLFVHLQGGRKVSGTLRGYDLFLNLVIDEALEETTPGQKH---PIGTVVIRGNSVTSMET 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|255945545|ref|XP_002563540.1| Pc20g10480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588275|emb|CAP86377.1| Pc20g10480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 88
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ L RK++G+LR +D F N+VL+ A E G+ +P+G+ VIRG +VV++
Sbjct: 25 RVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKEGGE---KVPIGMSVIRGNSVVMLEA 81
Query: 61 LD 62
L+
Sbjct: 82 LE 83
>gi|315425372|dbj|BAJ47038.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|315426552|dbj|BAJ48182.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|315426610|dbj|BAJ48238.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|343485302|dbj|BAJ50956.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
Length = 74
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+LV LR+G+ L GLL+ +DQ N+VLE E I D LG V+RG+++V+I
Sbjct: 18 VLVRLRNGKVLRGLLKGYDQHMNIVLEDTDELI---DENTQNKLGTIVVRGDSIVMI 71
>gi|409049871|gb|EKM59348.1| hypothetical protein PHACADRAFT_169890 [Phanerochaete carnosa
HHB-10118-sp]
Length = 77
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V L+ GRK+ G+LR +D F N+VL+ A E + P+G VIRG +V +
Sbjct: 16 KLFVHLQGGRKVSGVLRGYDLFLNLVLDDALEETTPAQKH---PIGTVVIRGNSVTSMET 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|448578387|ref|ZP_21643822.1| snRNP-like protein [Haloferax larsenii JCM 13917]
gi|448592536|ref|ZP_21651643.1| snRNP-like protein [Haloferax elongans ATCC BAA-1513]
gi|445726928|gb|ELZ78544.1| snRNP-like protein [Haloferax larsenii JCM 13917]
gi|445731541|gb|ELZ83125.1| snRNP-like protein [Haloferax elongans ATCC BAA-1513]
Length = 75
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+ V L+DG G+L +DQ NVVLE + + + GD+ + +IRG+NVV I
Sbjct: 16 PVTVTLKDGSAYYGVLAGYDQHMNVVLEESLDDTMPGDIELEQVEDTTIIRGDNVVTI 73
>gi|389848158|ref|YP_006350397.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mediterranei ATCC 33500]
gi|448618366|ref|ZP_21666603.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mediterranei ATCC 33500]
gi|388245464|gb|AFK20410.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mediterranei ATCC 33500]
gi|445746737|gb|ELZ98195.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mediterranei ATCC 33500]
Length = 76
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGAC-ERIIVGDLYCDIPLGLYVIRGENVVLI 58
+ VLL+DG G+L +DQ NVVLE A E + GD+ + +IRG+NVV I
Sbjct: 16 PVTVLLKDGNAYFGVLAGYDQHMNVVLEEALDEDSVPGDIELEQVQDTTIIRGDNVVTI 74
>gi|440797084|gb|ELR18179.1| small nuclear ribonucleoprotein G, putative [Acanthamoeba
castellanii str. Neff]
Length = 76
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R++ G+LR FDQF N+VLE E + + LG+ VIRG +V+LI
Sbjct: 16 KLAIRLNANRRVSGILRGFDQFMNLVLEDTVEEVSSTEKN---ELGMVVIRGNSVILIEP 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|302768987|ref|XP_002967913.1| hypothetical protein SELMODRAFT_227744 [Selaginella
moellendorffii]
gi|300164651|gb|EFJ31260.1| hypothetical protein SELMODRAFT_227744 [Selaginella
moellendorffii]
Length = 81
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+++ L R ++G+LR FDQF N+VL+ E I G+ +I G+ VIRG +V +I
Sbjct: 17 KLMIKLNANRVVVGVLRGFDQFMNLVLDNTME--ISGNERTEI--GMVVIRGNSVAMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|167392087|ref|XP_001740010.1| lsm1 [Entamoeba dispar SAW760]
gi|165896050|gb|EDR23590.1| lsm1, putative [Entamoeba dispar SAW760]
Length = 94
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V+ G+ +G+L +D N+VL+ + ER + +I GL ++RG+ +++IG
Sbjct: 11 KVEVITTLGKVYIGILTGYDNPMNIVLKNSVERTFSKEGVSNISCGLLILRGDEIMVIGG 70
Query: 61 LDLEKEELPAHMTCVSTAEIKRA 83
L+ EK+ CV + + +A
Sbjct: 71 LNEEKDN-QLDWQCVVSNPLSQA 92
>gi|390601213|gb|EIN10607.1| like-Sm ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 77
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V L+ GRK+ G LR +D F N+V++ A E + PLG VIRG +V +
Sbjct: 16 KLFVHLQGGRKVSGTLRGYDLFLNLVIDDALEETTPAQKH---PLGTVVIRGNSVTSMET 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|345561980|gb|EGX45052.1| hypothetical protein AOL_s00173g153 [Arthrobotrys oligospora ATCC
24927]
Length = 103
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII------VGDLYCDI-PLGLYVIRGEN 54
+ V+ DGR L+G L DQ N++L+ ERI V + +I GLY+IRG+N
Sbjct: 12 VTVITSDGRTLIGTLLGHDQTTNLILQNTRERIFQTLDTDVENTPSEIVEHGLYLIRGDN 71
Query: 55 VVLIGELD 62
V++ G +D
Sbjct: 72 VLVCGLVD 79
>gi|391346676|ref|XP_003747595.1| PREDICTED: small nuclear ribonucleoprotein G-like [Metaseiulus
occidentalis]
Length = 76
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
L R + G+LR FD F N+VLE A E + G P+G+ VIRG ++VL+
Sbjct: 21 LNGSRVVSGILRGFDPFMNIVLEEAFEEVKGGQ---RTPIGMTVIRGNSIVLL 70
>gi|326517334|dbj|BAK00034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 80
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + GD DI G+ V+RG +VV+I
Sbjct: 17 KLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE--VNGDEKTDI--GMVVLRGNSVVMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|291244885|ref|XP_002742321.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G-like
[Saccoglossus kowalevskii]
Length = 77
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR++ G+LR +D F N+V++ + E I G+ + +G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRQVTGVLRGYDPFMNLVMDESVEEISGGEKHQ---IGMVVIRGNSIIMLEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|448611893|ref|ZP_21662323.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mucosum ATCC BAA-1512]
gi|445742654|gb|ELZ94148.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mucosum ATCC BAA-1512]
Length = 76
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGAC-ERIIVGDLYCDIPLGLYVIRGENVVLI 58
+ VLL+DG G+L +DQ NVVLE A E + GD+ + +IRG+NVV I
Sbjct: 16 PVTVLLKDGNAYYGVLAGYDQHMNVVLEEALDEDAVPGDIDLEQVEDTTIIRGDNVVTI 74
>gi|168049678|ref|XP_001777289.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671391|gb|EDQ57944.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 76
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR ++G+LR FDQF N+VL+ E + G +I G+ VIRG +VV+I
Sbjct: 17 KLNIKLNAGRNVVGVLRGFDQFMNLVLDNTVE--VQGAEKNEI--GMVVIRGNSVVMIEA 72
Query: 61 LDL 63
L++
Sbjct: 73 LEV 75
>gi|19113214|ref|NP_596422.1| U4/U6 x U5 tri-snRNP complex Sm snRNP core protein Smg1
[Schizosaccharomyces pombe 972h-]
gi|6094213|sp|O74966.1|RUXG_SCHPO RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|3169092|emb|CAA19285.1| U4/U6 x U5 tri-snRNP complex Sm snRNP core protein Smg1
[Schizosaccharomyces pombe]
Length = 77
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK+ G+LR +D F N+VLE + E + G+ + +G IRG +V++I
Sbjct: 16 QVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEEKVDGE---KVKIGSVAIRGNSVIMIET 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|327311460|ref|YP_004338357.1| Small nuclear ribonucleoprotein (snRNP) --like protein
[Thermoproteus uzoniensis 768-20]
gi|326947939|gb|AEA13045.1| Small nuclear ribonucleoprotein (snRNP) - like protein
[Thermoproteus uzoniensis 768-20]
Length = 75
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++LV LRDG ++ G+L+SFDQ N++LE A E ++ ++ + G V+RGENV+ +
Sbjct: 19 RVLVKLRDGYEIRGILKSFDQHVNLLLEDAEE--VIDNVI--LKRGTMVVRGENVLFV 72
>gi|170106101|ref|XP_001884262.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640608|gb|EDR04872.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 78
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V L+ GRK+ G LR +D F N+V++ A E + P+G VIRG +V +
Sbjct: 16 KLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIEETTPAQKH---PIGTVVIRGNSVTSMET 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|168067143|ref|XP_001785484.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662891|gb|EDQ49691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 77
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR ++G+LR FDQF N+VL+ E I G +I G+ VIRG +VV+I
Sbjct: 17 KLNIKLNAGRNVVGVLRGFDQFMNLVLDNTVE--INGADRNEI--GMVVIRGNSVVMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|393246263|gb|EJD53772.1| LSM-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 100
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V ++ GRK+ G LR FD F N+VL+ A + + PLG VIRG +V +
Sbjct: 39 KLFVHIQGGRKVSGTLRGFDIFLNLVLDDAQDESVPAQ---KAPLGTVVIRGNSVTSMET 95
Query: 61 LD 62
L+
Sbjct: 96 LE 97
>gi|255578959|ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
gi|223530136|gb|EEF32048.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
Length = 80
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + GD DI G+ VIRG +VV +
Sbjct: 17 KLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNGDEKTDI--GMVVIRGNSVVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|194694128|gb|ACF81148.1| unknown [Zea mays]
gi|195637264|gb|ACG38100.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195645546|gb|ACG42241.1| small nuclear ribonucleoprotein G [Zea mays]
gi|413955444|gb|AFW88093.1| Small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV+I
Sbjct: 17 KLQIKLNANRVVIGTLRGFDQFMNLVIDNTVE--VNGNDKTDI--GMVVIRGNSVVMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|224088536|ref|XP_002308466.1| predicted protein [Populus trichocarpa]
gi|222854442|gb|EEE91989.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + GD DI G+ VIRG +VV +
Sbjct: 17 KLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNGDEKTDI--GMVVIRGNSVVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|116780179|gb|ABK21578.1| unknown [Picea sitchensis]
gi|116780948|gb|ABK21894.1| unknown [Picea sitchensis]
Length = 80
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+VL+G E + G+ +I G+ VIRG +VV+I
Sbjct: 17 KLNIKLNANRVVVGTLRGFDQFMNLVLDGTVE--VNGNERNEI--GMVVIRGNSVVMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|296424977|ref|XP_002842020.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638277|emb|CAZ86211.1| unnamed protein product [Tuber melanosporum]
Length = 99
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG----DLYCDIPLGLYVIRGENVVL 57
+ ++ DGR L G L DQ N++L ERI + + GLY+IRG+NV +
Sbjct: 12 VTIITSDGRTLTGKLMGHDQTTNLILSRTIERIFATPGSEEATQQVEHGLYLIRGDNVAI 71
Query: 58 IGELDLEKE 66
G +D + E
Sbjct: 72 CGLVDEQLE 80
>gi|302404042|ref|XP_002999859.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261361361|gb|EEY23789.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 85
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L GRK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RLFVQLNGGRKVIGVLRGYDVFLNIVLDEAVEEKEGGE---KVRIGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|326437234|gb|EGD82804.1| N-alpha-acetyltransferase 38 [Salpingoeca sp. ATCC 50818]
Length = 117
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 14 GLLRSFDQFANVVLEGACERIIVGDLYCDI-PLGLYVIRGENVV 56
G LR FDQ N++L + ER++ ++ PLGLY+IRG+NV+
Sbjct: 73 GTLRGFDQATNLILTDSSERVVSLHEGVEVVPLGLYIIRGDNVL 116
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERI 34
KI V+ +DG ++G LR FDQ N++L + ER+
Sbjct: 8 KIAVVTQDGHFIVGTLRGFDQATNLILTDSSERV 41
>gi|300123521|emb|CBK24793.2| unnamed protein product [Blastocystis hominis]
Length = 108
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-PLGLYVIRGENVVLIG 59
K+++L DGR G+LR DQ N++LE ERI + +Y+ RG++ LIG
Sbjct: 12 KVVILTNDGRTFTGMLRGVDQVTNLILEDVEERIFSQTEPMRVEKYDVYLFRGDDTSLIG 71
Query: 60 ELDLEKE 66
EK+
Sbjct: 72 LYSEEKD 78
>gi|242040617|ref|XP_002467703.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
gi|241921557|gb|EER94701.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
Length = 81
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV+I
Sbjct: 17 KLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSVVMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|116182940|ref|XP_001221319.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186395|gb|EAQ93863.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 83
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ V L RK+LG+LR +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVLGVLRGYDVFLNIVLDDAVEEKDNGE---KVKLGMVVIRGNSVVML 69
>gi|389746943|gb|EIM88122.1| like-Sm ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 77
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V L+ GRK+ G LR +D F N+V++ A E + P+G VIRG +V +
Sbjct: 16 KLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIEETTPAQKH---PIGTVVIRGNSVTSMET 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|242050850|ref|XP_002463169.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
gi|241926546|gb|EER99690.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
Length = 80
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV+I
Sbjct: 17 KLQIKLNANRVVIGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|453085821|gb|EMF13864.1| LSM-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 84
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G LR +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNGE---KVRLGMCVIRGNSVVMLEA 71
Query: 61 LD 62
LD
Sbjct: 72 LD 73
>gi|282848218|gb|ADB02890.1| putative small nuclear ribonucleoprotein polypeptide G/SNRNP-G
[Jatropha curcas]
Length = 80
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + GD DI G+ VIRG +VV +
Sbjct: 17 KLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNGDEKNDI--GMVVIRGNSVVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|261198058|ref|XP_002625431.1| predicted protein [Ajellomyces dermatitidis SLH14081]
gi|239595394|gb|EEQ77975.1| predicted protein [Ajellomyces dermatitidis SLH14081]
gi|239607755|gb|EEQ84742.1| predicted protein [Ajellomyces dermatitidis ER-3]
gi|327354601|gb|EGE83458.1| small nuclear ribonucleoprotein SmG [Ajellomyces dermatitidis
ATCC 18188]
Length = 78
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGNRKVIGILRGYDVFMNIVLDEAVEEKNGGE---KVRLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|34394185|dbj|BAC84637.1| putative small nuclear ribonucleoprotein E [Oryza sativa Japonica
Group]
gi|215769180|dbj|BAH01409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199999|gb|EEC82426.1| hypothetical protein OsI_26821 [Oryza sativa Indica Group]
gi|222637431|gb|EEE67563.1| hypothetical protein OsJ_25073 [Oryza sativa Japonica Group]
Length = 80
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV+I
Sbjct: 17 KLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVVMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|154283627|ref|XP_001542609.1| small nuclear ribonucleoprotein SmG [Ajellomyces capsulatus NAm1]
gi|150410789|gb|EDN06177.1| small nuclear ribonucleoprotein SmG [Ajellomyces capsulatus NAm1]
gi|225561938|gb|EEH10218.1| hypothetical protein HCBG_01863 [Ajellomyces capsulatus G186AR]
gi|240275552|gb|EER39066.1| hypothetical protein HCDG_07010 [Ajellomyces capsulatus H143]
gi|325091383|gb|EGC44693.1| hypothetical protein HCEG_03908 [Ajellomyces capsulatus H88]
Length = 78
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+V++ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGNRKVIGILRGYDVFMNIVMDEAVEEKSGGE---KVRLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|305662480|ref|YP_003858768.1| Sm ribonucleoprotein-like protein [Ignisphaera aggregans DSM
17230]
gi|304377049|gb|ADM26888.1| Like-Sm ribonucleoprotein core [Ignisphaera aggregans DSM 17230]
Length = 78
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+L+ LR G+ + G LRS+D N+VL+ A E + G LG +IRGENVV+I +
Sbjct: 22 VLIKLRGGKSVRGKLRSYDLHLNIVLDDAEEELSDGSWR---KLGTVLIRGENVVVISPM 78
>gi|47026939|gb|AAT08690.1| small nuclear ribonucleoprotein polypeptide G [Hyacinthus
orientalis]
Length = 96
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV+I
Sbjct: 33 KLQIKLNANRVVVGTLRGFDQFMNLVIDNTME--VNGNDKNDI--GMVVIRGNSVVMIEA 88
Query: 61 LD 62
L+
Sbjct: 89 LE 90
>gi|115453489|ref|NP_001050345.1| Os03g0410900 [Oryza sativa Japonica Group]
gi|37991869|gb|AAR06315.1| putative small nuclear ribonucleoprotein polypeptide G [Oryza
sativa Japonica Group]
gi|108708766|gb|ABF96561.1| small nuclear ribonucleoprotein G, putative, expressed [Oryza
sativa Japonica Group]
gi|113548816|dbj|BAF12259.1| Os03g0410900 [Oryza sativa Japonica Group]
gi|125544286|gb|EAY90425.1| hypothetical protein OsI_12008 [Oryza sativa Indica Group]
gi|125586635|gb|EAZ27299.1| hypothetical protein OsJ_11235 [Oryza sativa Japonica Group]
gi|215769229|dbj|BAH01458.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 80
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + G+ DI G+ V+RG +VV+I
Sbjct: 17 KLQIKLNANRVIVGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVVRGNSVVMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|452989425|gb|EME89180.1| hypothetical protein MYCFIDRAFT_25154 [Pseudocercospora fijiensis
CIRAD86]
Length = 98
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPL----GLYVIRGENVV 56
K+ ++L DGR ++G L S D N+ LE ERI+ G + GL+++RG+NVV
Sbjct: 10 KVCLILVDGRCMVGNLISCDAVTNLALENCVERIVRGHEEEEDSEEEERGLFMVRGDNVV 69
Query: 57 LIGELDLE 64
+ G +D E
Sbjct: 70 VCGLVDEE 77
>gi|390939095|ref|YP_006402833.1| Sm ribonucleoprotein-like protein [Desulfurococcus fermentans DSM
16532]
gi|390192202|gb|AFL67258.1| Like-Sm ribonucleoprotein core [Desulfurococcus fermentans DSM
16532]
Length = 75
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++L+ +D L G LRSFDQ N+VL+ A E + G LG VIRG+ VVLI
Sbjct: 16 QVLIKTKDNIPLRGKLRSFDQHLNIVLDDAEEILSNGSTR---KLGTVVIRGDTVVLISP 72
Query: 61 L 61
L
Sbjct: 73 L 73
>gi|426195723|gb|EKV45652.1| hypothetical protein AGABI2DRAFT_72502 [Agaricus bisporus var.
bisporus H97]
Length = 78
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V L+ GRK+ G LR +D F N+V++ A E + P+G VIRG +V +
Sbjct: 16 KLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIEETTPAQKH---PIGQVVIRGNSVTSMET 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|357159383|ref|XP_003578429.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
isoform 1 [Brachypodium distachyon]
gi|357159386|ref|XP_003578430.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
isoform 2 [Brachypodium distachyon]
Length = 81
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + + R ++G LR FDQF N+V++ E + G+ DI G+ V+RG +VV+I
Sbjct: 17 KLQIKMNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNEKTDI--GMVVVRGNSVVMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|367030948|ref|XP_003664757.1| hypothetical protein MYCTH_2119714 [Myceliophthora thermophila
ATCC 42464]
gi|347012028|gb|AEO59512.1| hypothetical protein MYCTH_2119714 [Myceliophthora thermophila
ATCC 42464]
Length = 83
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDNGE---KVKLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|226509589|ref|NP_001148720.1| small nuclear ribonucleoprotein G [Zea mays]
gi|194698570|gb|ACF83369.1| unknown [Zea mays]
gi|195609740|gb|ACG26700.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195621638|gb|ACG32649.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195656303|gb|ACG47619.1| small nuclear ribonucleoprotein G [Zea mays]
gi|414867200|tpg|DAA45757.1| TPA: Small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + + R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV+I
Sbjct: 17 KLQIKMNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSVVMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|401842941|gb|EJT44937.1| SMX2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 67
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGL-YVIRGENVVLIG 59
KIL+ + RK+ G+LR +D F NVVL+ A E I D + PLGL VIRG +++ +
Sbjct: 4 KILLNINGSRKIAGVLRGYDIFLNVVLDDAME-INGKDPASNHPLGLQTVIRGNSIISLE 62
Query: 60 ELD 62
LD
Sbjct: 63 ALD 65
>gi|156839006|ref|XP_001643199.1| hypothetical protein Kpol_1011p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113798|gb|EDO15341.1| hypothetical protein Kpol_1011p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 76
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG-LYVIRGENVVLIG 59
K+L+ L RK+ G+LR +D F NVV++ A E + +IPLG VIRG +VV +
Sbjct: 14 KVLLQLNGSRKVAGILRGYDIFLNVVIDDAIE---ISKDGTNIPLGSQTVIRGNSVVSLE 70
Query: 60 ELD 62
LD
Sbjct: 71 ALD 73
>gi|295665420|ref|XP_002793261.1| small nuclear ribonucleoprotein SmG [Paracoccidioides sp.
'lutzii' Pb01]
gi|226278175|gb|EEH33741.1| small nuclear ribonucleoprotein SmG [Paracoccidioides sp.
'lutzii' Pb01]
Length = 78
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V + RK++G+LR +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLFVQINGNRKVIGILRGYDVFMNIVLDEAVEEKSGGE---KVRLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|225679289|gb|EEH17573.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb03]
Length = 78
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V + RK++G+LR +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLFVQINGNRKVIGILRGYDVFMNIVLDEAVEEKSGGE---KVRLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|119188491|ref|XP_001244852.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|320031840|gb|EFW13798.1| small nuclear ribonucleoprotein SmG [Coccidioides posadasii str.
Silveira]
gi|392867766|gb|EAS33463.2| small nuclear ribonucleoprotein SmG [Coccidioides immitis RS]
Length = 78
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++L+ + R+++G+LR +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLLIQINGNRRVIGVLRGYDVFMNIVLDEAIEEKTGGE---KVRLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|452842262|gb|EME44198.1| hypothetical protein DOTSEDRAFT_71875 [Dothistroma septosporum
NZE10]
Length = 85
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G LR +D F N+VL+ A E G+ LG+ VIRG +VV++
Sbjct: 15 RVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNGE---KARLGMCVIRGNSVVMMEA 71
Query: 61 LD 62
LD
Sbjct: 72 LD 73
>gi|336271831|ref|XP_003350673.1| hypothetical protein SMAC_02344 [Sordaria macrospora k-hell]
gi|380094835|emb|CCC07337.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 155
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 26/29 (89%)
Query: 39 LYCDIPLGLYVIRGENVVLIGELDLEKEE 67
LY D+ GL+V+RGENV+L+GE+DL++++
Sbjct: 76 LYADVDRGLFVVRGENVLLMGEIDLDRDD 104
>gi|406700597|gb|EKD03763.1| u6 snRNA-associated sm-like protein lsm8 [Trichosporon asahii
var. asahii CBS 8904]
Length = 129
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENV 55
+ V+L DGR ++G L+ D + N++L + ER D + I LGLY+I+G+NV
Sbjct: 12 VQVILYDGRIIVGRLKGNDNYCNLILSDSVEREYSADKGVEMISLGLYMIKGDNV 66
>gi|118483312|gb|ABK93558.1| unknown [Populus trichocarpa]
Length = 80
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + GD DI G+ V+RG +VV +
Sbjct: 17 KLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNGDEKTDI--GMVVLRGNSVVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|15229773|ref|NP_187757.1| small nuclear ribonucleoprotein G [Arabidopsis thaliana]
gi|297833932|ref|XP_002884848.1| hypothetical protein ARALYDRAFT_478489 [Arabidopsis lyrata subsp.
lyrata]
gi|12322914|gb|AAG51452.1|AC008153_25 putative small nuclear ribonucleoprotein polypeptide G;
65009-64161 [Arabidopsis thaliana]
gi|17065484|gb|AAL32896.1| putative small nuclear ribonucleoprotein polypeptide G
[Arabidopsis thaliana]
gi|24899751|gb|AAN65090.1| putative small nuclear ribonucleoprotein polypeptide G
[Arabidopsis thaliana]
gi|297330688|gb|EFH61107.1| hypothetical protein ARALYDRAFT_478489 [Arabidopsis lyrata subsp.
lyrata]
gi|332641534|gb|AEE75055.1| small nuclear ribonucleoprotein G [Arabidopsis thaliana]
Length = 79
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + GD DI G+ VIRG ++V +
Sbjct: 17 KLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNGDDKTDI--GMVVIRGNSIVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|402590109|gb|EJW84040.1| hypothetical protein WUBG_05049 [Wuchereria bancrofti]
Length = 79
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
L R + G+LR FD F N+V+E A E + GD +G+ VIRG ++V++
Sbjct: 21 LNGNRSVSGILRGFDPFMNIVVEDAVENLKSGDKNE---IGMVVIRGNSIVIM 70
>gi|224138462|ref|XP_002322820.1| predicted protein [Populus trichocarpa]
gi|222867450|gb|EEF04581.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ + + GD DI G+ VIRG +VV +
Sbjct: 17 KLQIKLNANRMVVGTLRGFDQFMNLVVDNTVD--VNGDEKTDI--GMVVIRGNSVVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|145353525|ref|XP_001421061.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581297|gb|ABO99354.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 72
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVV 56
K+ + L R ++G LR FDQF NVVL+ A D + P+G+ V+RG +VV
Sbjct: 4 KLRLRLNGNRNVVGTLRGFDQFLNVVLDDATN-----DTTSEKTPMGMIVVRGNSVV 55
>gi|392592906|gb|EIW82232.1| like-Sm ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 77
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVV 56
K+ V L+ GRK+ G+LR +D F N+V++ A E + P+G VIRG +V
Sbjct: 16 KLFVHLQGGRKVSGILRGYDLFLNLVIDDALEESSPAQKH---PIGTVVIRGNSVT 68
>gi|156405713|ref|XP_001640876.1| predicted protein [Nematostella vectensis]
gi|156228012|gb|EDO48813.1| predicted protein [Nematostella vectensis]
Length = 77
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR +D F N+VL+ A E + + + +G+ VIRG ++V +
Sbjct: 16 KLSLKLNGGRHVSGVLRGYDPFMNLVLDDAVENVSGNEKHA---IGMVVIRGNSIVTMEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|380478035|emb|CCF43823.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 108
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGE---KVRLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|218884605|ref|YP_002428987.1| Small nuclear ribonucleoprotein (snRNP)-like protein
[Desulfurococcus kamchatkensis 1221n]
gi|218766221|gb|ACL11620.1| Small nuclear ribonucleoprotein (snRNP) - like protein
[Desulfurococcus kamchatkensis 1221n]
Length = 75
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+L+ +D L G LRSFDQ N+VL+ A E + G LG VIRG+ VVLI L
Sbjct: 17 VLIKTKDNIPLRGKLRSFDQHLNIVLDDAEEILSNGSTR---KLGTIVIRGDTVVLISPL 73
>gi|225440849|ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleoprotein G [Vitis
vinifera]
gi|297740131|emb|CBI30313.3| unnamed protein product [Vitis vinifera]
Length = 80
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV +
Sbjct: 17 KLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNGNEKTDI--GMVVIRGNSVVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|324514246|gb|ADY45805.1| Small nuclear ribonucleoprotein G [Ascaris suum]
Length = 79
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
L R + G+LR FD F N+V+E A E + G+ LG+ VIRG ++V++
Sbjct: 21 LNGNRHVSGVLRGFDPFMNIVVEDAVEHLKNGESNT---LGMVVIRGNSIVIM 70
>gi|70944071|ref|XP_742007.1| u6 snRNA-associated sm-like protein [Plasmodium chabaudi
chabaudi]
gi|56520743|emb|CAH81648.1| u6 snRNA-associated sm-like protein, putative [Plasmodium
chabaudi chabaudi]
Length = 65
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 20 DQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDLE 64
DQ N++L ERI L I LG+Y+IRG+NV LIGE+D E
Sbjct: 1 DQTTNIILGNCYERIYKESLE-KISLGIYIIRGDNVTLIGEIDEE 44
>gi|340520043|gb|EGR50280.1| predicted protein [Trichoderma reesei QM6a]
gi|358387525|gb|EHK25119.1| hypothetical protein TRIVIDRAFT_32934 [Trichoderma virens Gv29-8]
Length = 83
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ I LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKDGGE---KIRLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|171694560|ref|XP_001912204.1| hypothetical protein [Podospora anserina S mat+]
gi|170947522|emb|CAP59683.1| unnamed protein product [Podospora anserina S mat+]
Length = 85
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+V++ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVMDDAVEEKDGGE---KVKLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|414867201|tpg|DAA45758.1| TPA: small nuclear ribonucleoprotein G [Zea mays]
Length = 67
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + + R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV+I
Sbjct: 4 KLQIKMNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSVVMIEA 59
Query: 61 LD 62
L+
Sbjct: 60 LE 61
>gi|151940745|gb|EDN59132.1| Sm G [Saccharomyces cerevisiae YJM789]
gi|190406555|gb|EDV09822.1| small nuclear ribonucleoprotein G [Saccharomyces cerevisiae
RM11-1a]
gi|256268877|gb|EEU04227.1| Smx2p [Saccharomyces cerevisiae JAY291]
gi|349577899|dbj|GAA23066.1| K7_Smx2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299654|gb|EIW10747.1| Smx2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 77
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG-DLYCDIPLGL-YVIRGENVVLI 58
KIL+ + RK+ G+LR +D F NVVL+ A E I G D + PLGL VIRG +++ +
Sbjct: 14 KILLNINGSRKVAGILRGYDIFLNVVLDDAME--INGEDPANNHPLGLQTVIRGNSIISL 71
Query: 59 GELD 62
LD
Sbjct: 72 EALD 75
>gi|14192871|gb|AAK55776.1|AC079038_10 Putative small nuclear ribonucleoprotein G [Oryza sativa]
Length = 94
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
V L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV+I L+
Sbjct: 34 VKLNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVVMIEALE 88
>gi|154300461|ref|XP_001550646.1| hypothetical protein BC1G_11054 [Botryotinia fuckeliana B05.10]
gi|347828363|emb|CCD44060.1| similar to small nuclear ribonucleoprotein g [Botryotinia
fuckeliana]
Length = 85
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKEGGE---KVKIGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|310798750|gb|EFQ33643.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 84
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGE---KVRLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|339245769|ref|XP_003374518.1| putative small nuclear ribonucleoprotein G [Trichinella spiralis]
gi|316972305|gb|EFV55988.1| putative small nuclear ribonucleoprotein G [Trichinella spiralis]
Length = 76
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
K+ + L RK+ G+LR FD F N+V++ A E + G+ I +G+ V+RG +V L+
Sbjct: 16 KMQLRLNGDRKISGVLRGFDPFMNMVIDEAVEHLKTGE---QIMIGMVVVRGNSVTLM 70
>gi|85000769|ref|XP_955103.1| U6 snRNA-associated Sm-like potein [Theileria annulata strain
Ankara]
gi|65303249|emb|CAI75627.1| U6 snRNA-associated Sm-like potein, putative [Theileria annulata]
Length = 113
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC-DIPLGLYVIRGENV 55
+ V+ DGR +G+L+ FDQ N+VL ER+ D ++ LG+Y++RG+N+
Sbjct: 19 SVFVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIYLLRGDNM 74
>gi|392568108|gb|EIW61282.1| like-Sm ribonucleo protein [Trametes versicolor FP-101664 SS1]
gi|395328913|gb|EJF61303.1| like-Sm ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
gi|449549694|gb|EMD40659.1| hypothetical protein CERSUDRAFT_111239 [Ceriporiopsis
subvermispora B]
Length = 77
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V L+ GRK+ G LR +D F N+V++ A E + P+G VIRG +V +
Sbjct: 16 KLFVHLQGGRKVSGTLRGYDLFLNLVIDDALEETNPAQKH---PIGTVVIRGNSVTSMET 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|259146173|emb|CAY79432.1| Smx2p [Saccharomyces cerevisiae EC1118]
Length = 77
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG-DLYCDIPLGLY-VIRGENVVLI 58
KIL+ + RK+ G+LR +D F NVVL+ A E I G D + PLGL VIRG +++ +
Sbjct: 14 KILLNINGSRKVAGILRGYDIFLNVVLDDAME--INGEDPANNHPLGLQAVIRGNSIISL 71
Query: 59 GELD 62
LD
Sbjct: 72 EALD 75
>gi|226291004|gb|EEH46432.1| small nuclear ribonucleoprotein SmG [Paracoccidioides
brasiliensis Pb18]
Length = 79
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ V + RK++G+LR +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLFVQINGNRKVIGILRGYDVFMNIVLDEAVEEKSGGE---KVRLGMVVIRGNSVVML 69
>gi|170576974|ref|XP_001893831.1| small nuclear ribonucleoprotein G [Brugia malayi]
gi|312077085|ref|XP_003141148.1| small nuclear ribonucleoprotein G [Loa loa]
gi|158599912|gb|EDP37330.1| small nuclear ribonucleoprotein G, putative [Brugia malayi]
gi|307763686|gb|EFO22920.1| small nuclear ribonucleoprotein G [Loa loa]
Length = 79
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
L R + G+LR FD F N+V+E A E + GD +G+ VIRG ++V++
Sbjct: 21 LNGNRSVSGILRGFDPFMNIVVEDAVENLKNGDKNE---IGMVVIRGNSIVIM 70
>gi|400602043|gb|EJP69668.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 83
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ V L RK++G+LR +D F N+VL+ A E G+ LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDDAFEETEGGN---KTRLGMVVIRGNSVVML 69
>gi|284174982|ref|ZP_06388951.1| small nuclear riboprotein protein (snRNP-2) [Sulfolobus
solfataricus 98/2]
gi|384434272|ref|YP_005643630.1| Sm ribonucleoprotein-like protein [Sulfolobus solfataricus 98/2]
gi|261602426|gb|ACX92029.1| Like-Sm ribonucleoprotein core [Sulfolobus solfataricus 98/2]
Length = 76
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+LV L+ +++ G+LRS+DQ N+VL + E I D LG VIRG+NV+LI L
Sbjct: 17 VLVKLKGNKEVRGMLRSYDQHMNLVLSDSEE--IQSD-GSGKKLGTIVIRGDNVILISPL 73
>gi|389631277|ref|XP_003713291.1| sm snRNP core protein Smg1 [Magnaporthe oryzae 70-15]
gi|351645624|gb|EHA53484.1| sm snRNP core protein Smg1 [Magnaporthe oryzae 70-15]
gi|440466674|gb|ELQ35928.1| sm snRNP core protein Smg1 [Magnaporthe oryzae Y34]
gi|440476979|gb|ELQ58129.1| sm snRNP core protein Smg1 [Magnaporthe oryzae P131]
Length = 88
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
K+ V L RK++G++R +D F N+VLE A E G+ + +G VIRG +VV++
Sbjct: 15 KVFVQLNGSRKVVGVVRGYDVFLNIVLEDAFEEKDGGE---KVKIGTVVIRGNSVVML 69
>gi|358053885|dbj|GAB00018.1| hypothetical protein E5Q_06720 [Mixia osmundae IAM 14324]
Length = 111
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 6/46 (13%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG 46
+ILV LR+G KLL +++FD+ +N+VLE V +++ +IP G
Sbjct: 42 QILVALRNGHKLLARVKAFDRHSNMVLEN------VKEMWTEIPKG 81
>gi|195606768|gb|ACG25214.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + + R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV+I
Sbjct: 17 KLQIKMNANRVVIGTLRGFDQFMNLVVDNIVE--VNGNDKTDI--GMVVIRGNSVVMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|119484532|ref|XP_001262045.1| small nuclear ribonucleoprotein SmG, putative [Neosartorya
fischeri NRRL 181]
gi|121719811|ref|XP_001276604.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
clavatus NRRL 1]
gi|119404816|gb|EAW15178.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
clavatus NRRL 1]
gi|119410201|gb|EAW20148.1| small nuclear ribonucleoprotein SmG, putative [Neosartorya
fischeri NRRL 181]
Length = 78
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGE---KVAIGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|313125954|ref|YP_004036224.1| small nuclear ribonucleoprotein, lsm family [Halogeometricum
borinquense DSM 11551]
gi|448285794|ref|ZP_21477033.1| small nuclear ribonucleoprotein, lsm family [Halogeometricum
borinquense DSM 11551]
gi|312292319|gb|ADQ66779.1| Small nuclear ribonucleoprotein, LSM family [Halogeometricum
borinquense DSM 11551]
gi|445575824|gb|ELY30287.1| small nuclear ribonucleoprotein, lsm family [Halogeometricum
borinquense DSM 11551]
Length = 77
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGAC--ERIIVGDLYCDIPLGLYVIRGENVVLI 58
+ V L+DG G L +DQ NVVLE E I+G++ +IRG+NVV I
Sbjct: 16 SVTVNLKDGSSYYGTLAGYDQHMNVVLEAPADEEEAILGEIEVTPVEDTTIIRGDNVVTI 75
>gi|406865394|gb|EKD18436.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 83
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGTRKVIGILRGYDVFLNIVLDDAVEEKDGGE---KVRLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|361126108|gb|EHK98124.1| putative small nuclear ribonucleoprotein G [Glarea lozoyensis
74030]
Length = 85
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ V L RK++G+LR +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDGGE---KVRLGMVVIRGNSVVML 69
>gi|317036310|ref|XP_001398084.2| small nuclear ribonucleoprotein G [Aspergillus niger CBS 513.88]
gi|358372686|dbj|GAA89288.1| small nuclear ribonucleoprotein SmG [Aspergillus kawachii IFO
4308]
Length = 78
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGE---KVAIGMIVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|238483149|ref|XP_002372813.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus flavus
NRRL3357]
gi|317139686|ref|XP_001817686.2| small nuclear ribonucleoprotein G [Aspergillus oryzae RIB40]
gi|220700863|gb|EED57201.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus flavus
NRRL3357]
Length = 78
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGE---KVAIGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|449451158|ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Cucumis sativus]
gi|449482341|ref|XP_004156252.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Cucumis sativus]
Length = 80
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV +
Sbjct: 17 KLQIKLNANRLVIGTLRGFDQFMNLVVDNTVE--VNGNEKTDI--GMVVIRGNSVVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|430813244|emb|CCJ29390.1| unnamed protein product [Pneumocystis jirovecii]
Length = 76
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ ++L RK++G+LR +D F N+VL+ A E G+ C I G VIRG +VV++
Sbjct: 16 KVFLMLNGSRKVIGVLRGYDVFLNIVLDEAFEEKEGGE-KCAI--GTVVIRGNSVVMVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|354459631|pdb|3SWN|C Chain C, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459634|pdb|3SWN|F Chain F, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459637|pdb|3SWN|O Chain O, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459640|pdb|3SWN|R Chain R, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
Length = 117
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV---GDLYCDI-PLGLYVIRGENVV 56
+I GR++ G+L+ FDQ N+VL+ E++ G L I LGL V+RG +V
Sbjct: 39 RIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLV 98
Query: 57 LIGELDLEKEELP 69
LI +D EE+P
Sbjct: 99 LIAPMD-GSEEIP 110
>gi|193713710|ref|XP_001949387.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Acyrthosiphon pisum]
Length = 79
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R++ G+LR FD F N+VL+ E+I G + +G+ VIRG++V+ I
Sbjct: 16 KLSLKLNANRQVAGVLRGFDPFMNLVLDETVEKIKDGVVNS---IGMVVIRGDSVLTIEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|147806402|emb|CAN67622.1| hypothetical protein VITISV_014712 [Vitis vinifera]
Length = 148
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV +
Sbjct: 17 KLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNGNEKTDI--GMVVIRGNSVVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|402083491|gb|EJT78509.1| sm snRNP core protein Smg1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 86
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
K+ V L RK++G++R +D F N+VL+ A E G+ + LG+ VIRG +VV++
Sbjct: 15 KVFVQLNGSRKVVGVVRGYDVFLNIVLDEAFEDKDGGE---KVKLGMVVIRGNSVVML 69
>gi|70983548|ref|XP_747301.1| small nuclear ribonucleoprotein SmG [Aspergillus fumigatus Af293]
gi|66844927|gb|EAL85263.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
fumigatus Af293]
gi|159123693|gb|EDP48812.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
fumigatus A1163]
Length = 78
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFEEKQGGE---KVAIGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|356538387|ref|XP_003537685.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine
max]
gi|255630063|gb|ACU15385.1| unknown [Glycine max]
Length = 79
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV +
Sbjct: 17 KLQIKLNGNRMIVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|156040265|ref|XP_001587119.1| hypothetical protein SS1G_12149 [Sclerotinia sclerotiorum 1980]
gi|154696205|gb|EDN95943.1| hypothetical protein SS1G_12149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 84
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKEGGE---KVKIGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|15897658|ref|NP_342263.1| small nuclear riboprotein (snRNP-2) [Sulfolobus solfataricus P2]
gi|13813927|gb|AAK41053.1| Small nuclear riboprotein protein (snRNP-2) [Sulfolobus
solfataricus P2]
Length = 79
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+LV L+ +++ G+LRS+DQ N+VL + E I D LG VIRG+NV+LI L
Sbjct: 20 VLVKLKGNKEVRGMLRSYDQHMNLVLSDSEE--IQSD-GSGKKLGTIVIRGDNVILISPL 76
>gi|134083643|emb|CAK47035.1| unnamed protein product [Aspergillus niger]
Length = 105
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 26 RVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGE---KVAIGMIVIRGNSVVML 80
>gi|19075840|ref|NP_588340.1| U6 snRNP-associated protein Lsm7 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74626865|sp|O74499.1|LSM7_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|3581912|emb|CAA20851.1| U6 snRNP-associated protein Lsm7 (predicted) [Schizosaccharomyces
pombe]
Length = 113
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV---GDLYCDI-PLGLYVIRGENVV 56
+I GR++ G+L+ FDQ N+VL+ E++ G L I LGL V+RG +V
Sbjct: 35 RIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLV 94
Query: 57 LIGELDLEKEELP 69
LI +D EE+P
Sbjct: 95 LIAPMD-GSEEIP 106
>gi|71041581|pdb|1TH7|A Chain A, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041582|pdb|1TH7|B Chain B, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041583|pdb|1TH7|C Chain C, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041584|pdb|1TH7|D Chain D, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041585|pdb|1TH7|E Chain E, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041586|pdb|1TH7|F Chain F, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041587|pdb|1TH7|G Chain G, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041588|pdb|1TH7|H Chain H, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041589|pdb|1TH7|I Chain I, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041590|pdb|1TH7|J Chain J, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041591|pdb|1TH7|K Chain K, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041592|pdb|1TH7|L Chain L, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041593|pdb|1TH7|M Chain M, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041594|pdb|1TH7|N Chain N, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
Length = 81
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+LV L+ +++ G+LRS+DQ N+VL + E I D LG VIRG+NV+LI L
Sbjct: 22 VLVKLKGNKEVRGMLRSYDQHMNLVLSDSEE--IQSD-GSGKKLGTIVIRGDNVILISPL 78
>gi|336373417|gb|EGO01755.1| hypothetical protein SERLA73DRAFT_177234 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386246|gb|EGO27392.1| hypothetical protein SERLADRAFT_460722 [Serpula lacrymans var.
lacrymans S7.9]
Length = 77
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVV 56
K+ V L+ GR++ G LR +D F N+V++ A E + P+G VIRG +V
Sbjct: 16 KLFVHLQGGRRVSGTLRGYDLFLNLVIDDALEETTPAQKH---PIGTVVIRGNSVT 68
>gi|308505206|ref|XP_003114786.1| CRE-SNR-7 protein [Caenorhabditis remanei]
gi|308258968|gb|EFP02921.1| CRE-SNR-7 protein [Caenorhabditis remanei]
Length = 77
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
L R++ G+LR FD F N+V++ A E G I LG+ VIRG +VV++
Sbjct: 21 LNGNRQVSGILRGFDPFMNMVIDEAVEYPKSG---TPINLGMTVIRGNSVVIM 70
>gi|356505386|ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine
max]
gi|356572580|ref|XP_003554446.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Glycine max]
gi|255625815|gb|ACU13252.1| unknown [Glycine max]
Length = 79
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV +
Sbjct: 17 KLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|452979544|gb|EME79306.1| hypothetical protein MYCFIDRAFT_71922 [Pseudocercospora fijiensis
CIRAD86]
Length = 84
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G LR +D F N+VL+ A E + + LG+ VIRG +VV++
Sbjct: 15 RVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNNE---KVRLGMCVIRGNSVVMMEA 71
Query: 61 LD 62
LD
Sbjct: 72 LD 73
>gi|346971880|gb|EGY15332.1| hypothetical protein VDAG_06186 [Verticillium dahliae VdLs.17]
Length = 85
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGE---KVRIGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|298706362|emb|CBJ29371.1| similar to U6 snRNA-associated Sm-like protein LSm8 isoform 2
[Ectocarpus siliculosus]
Length = 119
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 14/63 (22%)
Query: 14 GLLRSFDQFANVVLEGACERI--------------IVGDLYCDIPLGLYVIRGENVVLIG 59
G L+ +D N+VLEG ERI + + LGLY+ RG+N+ +IG
Sbjct: 35 GNLKGYDHTINLVLEGCKERIYSQSRGVEQARETGTYSSMVVQVQLGLYICRGDNIAVIG 94
Query: 60 ELD 62
E+D
Sbjct: 95 EVD 97
>gi|345778417|ref|XP_003431727.1| PREDICTED: uncharacterized protein LOC100682645 [Canis lupus
familiaris]
Length = 181
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L DGR + G+L+ FD F N+V++ E G +G+ VIRG N++++
Sbjct: 121 KLSLKLNDGRHVQGILQGFDPFMNLVIDECVEMATSGQ---QNNIGMVVIRGNNIIMLEG 177
Query: 61 LD 62
L+
Sbjct: 178 LE 179
>gi|115491153|ref|XP_001210204.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197064|gb|EAU38764.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 78
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFEEKQGGE---KVAIGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|320591988|gb|EFX04427.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 86
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG ++V++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKDGGE---KVKIGMVVIRGNSIVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|195645046|gb|ACG41991.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 73
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
+ R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV+I L+
Sbjct: 15 MNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSVVMIEALE 67
>gi|357122008|ref|XP_003562708.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Brachypodium distachyon]
Length = 80
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R ++G LR FDQF N+V++ E + G+ DI G+ V+RG +VV+I
Sbjct: 17 KLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNDRNDI--GMVVLRGNSVVMIEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|367051545|ref|XP_003656151.1| hypothetical protein THITE_2120569 [Thielavia terrestris NRRL
8126]
gi|347003416|gb|AEO69815.1| hypothetical protein THITE_2120569 [Thielavia terrestris NRRL
8126]
Length = 83
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDNGE---KAKLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|334183663|ref|NP_001185323.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|332196294|gb|AEE34415.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
Length = 141
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 47/115 (40%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLY--------------------- 40
I V+ DGR ++G+L+ FDQ N++L+ + ER+ +
Sbjct: 15 ISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKCHLFNRILRKLTQIFKIGLVLQF 74
Query: 41 --------------CDI---------PLGLYVIRGENVVLIGELDLEKEELPAHM 72
C LGLY+IRG+N+ +IGELD EEL A +
Sbjct: 75 FVCMSGHVDTSLDKCSWIFLEGVQQHVLGLYIIRGDNIGVIGELD---EELDASL 126
>gi|449299266|gb|EMC95280.1| hypothetical protein BAUCODRAFT_577920 [Baudoinia compniacensis
UAMH 10762]
Length = 83
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G LR +D F N+VL+ A E + + LG+ VIRG +VV++
Sbjct: 15 RVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNNE---KVRLGMCVIRGNSVVMMEA 71
Query: 61 LD 62
LD
Sbjct: 72 LD 73
>gi|448414146|ref|ZP_21577285.1| small nuclear ribonucleoprotein, lsm family [Halosarcina pallida
JCM 14848]
gi|445682439|gb|ELZ34856.1| small nuclear ribonucleoprotein, lsm family [Halosarcina pallida
JCM 14848]
Length = 77
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGAC--ERIIVGDLYCDIPLGLYVIRGENVVLI 58
+ V L+DG G L +DQ NVVLE E I+G++ +IRG+NVV I
Sbjct: 17 VTVNLKDGSSYHGTLAGYDQHMNVVLEAPADEEEAILGEIEVTPVEDTTIIRGDNVVTI 75
>gi|323448261|gb|EGB04162.1| hypothetical protein AURANDRAFT_32975 [Aureococcus
anophagefferens]
Length = 77
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+ + + R++ G+LR +DQF N+VLE A E G P+G+ V+RG ++ + L
Sbjct: 17 LTIKMNGNRRVSGVLRGYDQFLNLVLEDATED---GSDGAKTPIGMVVLRGNGIIQLQSL 73
Query: 62 D 62
+
Sbjct: 74 E 74
>gi|85090916|ref|XP_958647.1| hypothetical protein NCU09880 [Neurospora crassa OR74A]
gi|336273960|ref|XP_003351734.1| hypothetical protein SMAC_00278 [Sordaria macrospora k-hell]
gi|28920025|gb|EAA29411.1| hypothetical protein NCU09880 [Neurospora crassa OR74A]
gi|336463997|gb|EGO52237.1| hypothetical protein NEUTE1DRAFT_90311 [Neurospora tetrasperma
FGSC 2508]
gi|350296078|gb|EGZ77055.1| LSM-domain-containing protein [Neurospora tetrasperma FGSC 2509]
gi|380096013|emb|CCC06060.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 85
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ V L RK++G+LR +D F N+VL+ A E G+ + LG+ IRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDGGE---KVKLGMVTIRGNSVVMM 69
>gi|407929252|gb|EKG22086.1| hypothetical protein MPH_00541 [Macrophomina phaseolina MS6]
Length = 81
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKAGGE---KVRIGMCVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|219884693|gb|ACL52721.1| unknown [Zea mays]
gi|413955445|gb|AFW88094.1| hypothetical protein ZEAMMB73_159101 [Zea mays]
Length = 74
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
V L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV+I L+
Sbjct: 14 VKLNANRVVIGTLRGFDQFMNLVIDNTVE--VNGNDKTDI--GMVVIRGNSVVMIEALE 68
>gi|341882586|gb|EGT38521.1| hypothetical protein CAEBREN_25112 [Caenorhabditis brenneri]
gi|341895108|gb|EGT51043.1| hypothetical protein CAEBREN_10134 [Caenorhabditis brenneri]
Length = 77
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
L R + G+LR FD F N+V++ A E G + LG+ VIRG +VV++
Sbjct: 21 LNGNRHVSGILRGFDPFMNMVIDEAVEYTKSG---ASVNLGMTVIRGNSVVIM 70
>gi|409043237|gb|EKM52720.1| hypothetical protein PHACADRAFT_261323 [Phanerochaete carnosa
HHB-10118-sp]
Length = 94
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+I V GR++ G+L+ FDQ N+VL+ E++ L LGL V+RG + L+
Sbjct: 19 RIRVKFTGGREVTGVLKGFDQLLNLVLDDVEEQLHTEPLPSTRQLGLVVLRGPTLTLLSP 78
Query: 61 LD 62
+D
Sbjct: 79 VD 80
>gi|401625929|gb|EJS43908.1| smx2p [Saccharomyces arboricola H-6]
Length = 77
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG-DLYCDIPLGL-YVIRGENVVLI 58
KIL+ + RK+ G+LR +D F NVVL+ A E I G + + PLGL VIRG +++ +
Sbjct: 14 KILLNVNGSRKIAGILRGYDIFLNVVLDDAME--INGENAANNHPLGLQTVIRGNSIISL 71
Query: 59 GELD 62
LD
Sbjct: 72 EALD 75
>gi|195657879|gb|ACG48407.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 67
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + + R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV+I
Sbjct: 4 KLQIKMNANRVVIGTLRGFDQFMNLVVDNIVE--VNGNDKTDI--GMVVIRGNSVVMIEA 59
Query: 61 LD 62
L+
Sbjct: 60 LE 61
>gi|320101466|ref|YP_004177058.1| LSM family small nuclear ribonucleoprotein [Desulfurococcus
mucosus DSM 2162]
gi|319753818|gb|ADV65576.1| Small nuclear ribonucleoprotein, LSM family [Desulfurococcus
mucosus DSM 2162]
Length = 75
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+L+ +D L G LRSFDQ N+VL+ E I GD LG VIRG+ VVLI L
Sbjct: 17 VLIKTKDSVSLRGKLRSFDQHLNIVLDDTEE--IRGDGSVR-KLGTVVIRGDTVVLISPL 73
>gi|67522076|ref|XP_659099.1| hypothetical protein AN1495.2 [Aspergillus nidulans FGSC A4]
gi|40744652|gb|EAA63808.1| hypothetical protein AN1495.2 [Aspergillus nidulans FGSC A4]
gi|259486817|tpe|CBF84982.1| TPA: small nuclear ribonucleoprotein SmG, putative
(AFU_orthologue; AFUA_8G04960) [Aspergillus nidulans
FGSC A4]
Length = 78
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RVFCELNGNRKVIGVLRGYDVFMNIVLDEAFEEKPGGE---KVAIGMIVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|281212625|gb|EFA86785.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 82
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V L R ++G+LR FD F N+VL+ E V I +G+ VIRG ++V++
Sbjct: 18 KMNVKLNGNRTVIGILRGFDSFMNIVLKDTVE---VTYPQEQINMGMVVIRGNSIVMMEP 74
Query: 61 LD 62
L+
Sbjct: 75 LE 76
>gi|410077765|ref|XP_003956464.1| hypothetical protein KAFR_0C03370 [Kazachstania africana CBS
2517]
gi|372463048|emb|CCF57329.1| hypothetical protein KAFR_0C03370 [Kazachstania africana CBS
2517]
Length = 76
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG-LYVIRGENVVLIG 59
K+L+ + RK+ G+LR +D F N+VL+ A E + +IPLG VIRG ++V +
Sbjct: 14 KVLLQINGSRKVAGILRGYDIFLNIVLDDAFE---LSKNDSNIPLGSQTVIRGNSIVAME 70
Query: 60 ELD 62
LD
Sbjct: 71 ALD 73
>gi|440640051|gb|ELR09970.1| small nuclear ribonucleoprotein G [Geomyces destructans 20631-21]
Length = 83
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDGGE---KVRIGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|302677314|ref|XP_003028340.1| hypothetical protein SCHCODRAFT_258381 [Schizophyllum commune H4-8]
gi|300102028|gb|EFI93437.1| hypothetical protein SCHCODRAFT_258381 [Schizophyllum commune H4-8]
Length = 118
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+I V GR++ GLL+ +DQ N+VL+ E +++ + + LGL V+RG + L+
Sbjct: 45 RIRVKFTGGREVTGLLKGYDQLLNLVLDEVTEDVLLPEPHQRS-LGLAVLRGPTITLVSP 103
Query: 61 LD 62
+D
Sbjct: 104 VD 105
>gi|195134290|ref|XP_002011570.1| GI11102 [Drosophila mojavensis]
gi|195399181|ref|XP_002058199.1| GJ15956 [Drosophila virilis]
gi|193906693|gb|EDW05560.1| GI11102 [Drosophila mojavensis]
gi|194150623|gb|EDW66307.1| GJ15956 [Drosophila virilis]
Length = 76
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++++ L GR + G+LR FD F NVVL+ E +G+ VIRG ++V++
Sbjct: 16 RMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEEC---KDNTKNSIGMVVIRGNSIVMVEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|429853426|gb|ELA28500.1| small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 104
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVV 56
++ V L RK++G+LR +D F N+VL+ A E G+ + LG+ VIRG +VV
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGE---KVRLGMVVIRGNSVV 67
>gi|46107748|ref|XP_380933.1| hypothetical protein FG00757.1 [Gibberella zeae PH-1]
gi|408399451|gb|EKJ78553.1| hypothetical protein FPSE_01277 [Fusarium pseudograminearum
CS3096]
Length = 84
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKDNGE---KVRIGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|62083383|gb|AAX62416.1| small nuclear ribonucleoprotein G [Lysiphlebus testaceipes]
Length = 76
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR ++G+LR FD F N+V++ + E G +G+ VIRG +V+++
Sbjct: 16 KLSLKLNGGRHVIGILRGFDPFMNMVIDESVEECKDGSQNN---IGMVVIRGNSVIMLEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|227827656|ref|YP_002829436.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.14.25]
gi|227830352|ref|YP_002832132.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
L.S.2.15]
gi|229579169|ref|YP_002837567.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
Y.G.57.14]
gi|229582076|ref|YP_002840475.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
Y.N.15.51]
gi|229584860|ref|YP_002843362.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.16.27]
gi|238619824|ref|YP_002914650.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.16.4]
gi|284997857|ref|YP_003419624.1| Like-Sm ribonucleoprotein, core [Sulfolobus islandicus L.D.8.5]
gi|385773326|ref|YP_005645892.1| Sm ribonucleoprotein core-like protein [Sulfolobus islandicus
HVE10/4]
gi|385775964|ref|YP_005648532.1| archaeal Sm1 protein [Sulfolobus islandicus REY15A]
gi|227456800|gb|ACP35487.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus L.S.2.15]
gi|227459452|gb|ACP38138.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.14.25]
gi|228009883|gb|ACP45645.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus Y.G.57.14]
gi|228012792|gb|ACP48553.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus Y.N.15.51]
gi|228019910|gb|ACP55317.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.16.27]
gi|238380894|gb|ACR41982.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.16.4]
gi|284445752|gb|ADB87254.1| Like-Sm ribonucleoprotein, core [Sulfolobus islandicus L.D.8.5]
gi|323474712|gb|ADX85318.1| archaeal Sm1 protein [Sulfolobus islandicus REY15A]
gi|323477440|gb|ADX82678.1| Sm ribonucleoprotein core-like protein [Sulfolobus islandicus
HVE10/4]
Length = 76
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+LV L+ +++ G LRS+DQ N+VL + E I D LG VIRG+NV+LI L
Sbjct: 17 VLVKLKGNKEVRGTLRSYDQHMNLVLSDSEE--IQSD-GSGKKLGTIVIRGDNVILISPL 73
>gi|340897533|gb|EGS17123.1| putative small nuclear ribonucleoprotein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 82
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L R+++G+LR +D F N+VL+ A E G+ + LG+ IRG +VV++
Sbjct: 15 RLFVELNGSRRVIGVLRGYDVFLNIVLDDAVEERPNGE---KVKLGMVTIRGNSVVILEP 71
Query: 61 LDLEKEELPAH 71
L+ ++ P
Sbjct: 72 LERIGDDRPGR 82
>gi|333449426|gb|AEF33399.1| small nuclear ribonucleoprotein polypeptide G protein
[Crassostrea ariakensis]
Length = 77
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
KI + L GR++ G+LR FD F N+V++ E +G+ +G+ V+RG +++L+
Sbjct: 16 KINLKLNGGRQIQGILRGFDPFMNLVVDECIEETKLGERN---QIGMVVVRGNSIILLEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|268565649|ref|XP_002639509.1| C. briggsae CBR-SNR-7 protein [Caenorhabditis briggsae]
Length = 77
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
L R + G+LR FD F N+V++ A E G+ I LG+ VIRG +VV++
Sbjct: 21 LNGNRHVSGILRGFDPFMNMVIDEAVEYPKNGN---SINLGMTVIRGNSVVIM 70
>gi|145535864|ref|XP_001453665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421387|emb|CAK86268.1| unnamed protein product [Paramecium tetraurelia]
Length = 103
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG 46
++L+ LR+ RKLLG +++FD+ N++LE E ++ +IP G
Sbjct: 31 QVLIELRNNRKLLGRVKAFDRHMNMILENVTE------MWTEIPKG 70
>gi|159042090|ref|YP_001541342.1| like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
gi|157920925|gb|ABW02352.1| Like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
Length = 79
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+LV LRDG + G L+++DQ N++L+ E I D I G+ VIRG+ V+ + +
Sbjct: 21 VLVKLRDGTTIRGTLKNYDQHMNLLLDDTEEII---DPKTSIKRGMVVIRGDTVLFVSPI 77
>gi|195042091|ref|XP_001991363.1| GH12097 [Drosophila grimshawi]
gi|193901121|gb|EDV99987.1| GH12097 [Drosophila grimshawi]
Length = 76
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++++ L GR + G+LR FD F NVVL+ E +G+ VIRG ++V++
Sbjct: 16 RMMLKLNGGRAVTGILRGFDPFMNVVLDDTIEEC---KDNTKNSIGMVVIRGNSIVMVEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|194763519|ref|XP_001963880.1| GF21254 [Drosophila ananassae]
gi|190618805|gb|EDV34329.1| GF21254 [Drosophila ananassae]
Length = 101
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++++ L GR + G+LR FD F NVVL+ E +G+ VIRG ++V++
Sbjct: 41 RMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEEC---KDNTKNNIGMVVIRGNSIVMVEA 97
Query: 61 LD 62
LD
Sbjct: 98 LD 99
>gi|134126|sp|P24715.1|RUXG_MEDSA RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|19573|emb|CAA44975.1| snRNP-related protein [Medicago sativa]
Length = 81
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L+ R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV + L+
Sbjct: 22 LKANRMIVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVVTVEALE 74
>gi|212541212|ref|XP_002150761.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
marneffei ATCC 18224]
gi|210068060|gb|EEA22152.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
marneffei ATCC 18224]
Length = 77
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGNRKVIGILRGYDVFMNIVLDDAVEEKADG---GKDRLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|357619057|gb|EHJ71789.1| small nuclear ribonucleoprotein G [Danaus plexippus]
Length = 76
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+VL+ + E G +G+ VIRG +++++
Sbjct: 16 KLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNN---IGMVVIRGNSIIMLES 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|452825043|gb|EME32042.1| small nuclear ribonucleoprotein G [Galdieria sulphuraria]
Length = 76
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
K+ V L RK+ G+LR +DQF N+VLE E++ G + D +G V+RG +V ++
Sbjct: 15 KVSVQLNGNRKVEGVLRGYDQFMNIVLEDCVEKL--GPM-NDKEIGTVVVRGNSVFIL 69
>gi|18860007|ref|NP_573139.1| small ribonucleoprotein particle protein SmG, isoform A
[Drosophila melanogaster]
gi|221372123|ref|NP_001138209.1| small ribonucleoprotein particle protein SmG, isoform B
[Drosophila melanogaster]
gi|195351500|ref|XP_002042272.1| GM13382 [Drosophila sechellia]
gi|195567140|ref|XP_002107128.1| GD15738 [Drosophila simulans]
gi|29428065|sp|Q9VXE0.1|RUXG_DROME RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|7293253|gb|AAF48634.1| small ribonucleoprotein particle protein SmG, isoform A
[Drosophila melanogaster]
gi|17944563|gb|AAL48169.1| RH35475p [Drosophila melanogaster]
gi|194124115|gb|EDW46158.1| GM13382 [Drosophila sechellia]
gi|194204529|gb|EDX18105.1| GD15738 [Drosophila simulans]
gi|220901796|gb|ACL82939.1| small ribonucleoprotein particle protein SmG, isoform B
[Drosophila melanogaster]
gi|220952224|gb|ACL88655.1| SmG-PA [synthetic construct]
Length = 76
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++++ L GR + G+LR FD F NVVL+ E +G+ VIRG ++V++
Sbjct: 16 RMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEEC---KDNTKNNIGMVVIRGNSIVMVEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|15224075|ref|NP_179971.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|297821653|ref|XP_002878709.1| hypothetical protein ARALYDRAFT_900880 [Arabidopsis lyrata subsp.
lyrata]
gi|6094211|sp|O82221.1|RUXG_ARATH RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|3738322|gb|AAC63663.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|21593829|gb|AAM65796.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|25083131|gb|AAN72046.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|30102776|gb|AAP21306.1| At2g23930 [Arabidopsis thaliana]
gi|297324548|gb|EFH54968.1| hypothetical protein ARALYDRAFT_900880 [Arabidopsis lyrata subsp.
lyrata]
gi|330252409|gb|AEC07503.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 80
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R + G LR FDQF N+V++ E + G+ DI G+ VIRG ++V +
Sbjct: 17 KLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSIVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|83765541|dbj|BAE55684.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864814|gb|EIT74108.1| hypothetical protein Ao3042_09989 [Aspergillus oryzae 3.042]
Length = 122
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ L RK++G+LR +D F N+VL+ A E G+ + +G+ VIRG +VV++
Sbjct: 4 RVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGE---KVAIGMVVIRGNSVVML 58
>gi|402220188|gb|EJU00260.1| U6 snRNA-associated Sm-like protein LSm7 [Dacryopinax sp. DJM-731
SS1]
Length = 120
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP----LGLYVIRGENVV 56
+I V + GR++ G+L+ FDQ N+VL+ E +L + P LGL V+RG +
Sbjct: 46 RIRVKFQGGREVTGVLKGFDQLMNLVLDDVVE-----NLSSEPPKQRNLGLVVLRGPTIT 100
Query: 57 LIGELD 62
L+ +D
Sbjct: 101 LLSPVD 106
>gi|194891288|ref|XP_001977464.1| GG18240 [Drosophila erecta]
gi|195479283|ref|XP_002100833.1| GE15956 [Drosophila yakuba]
gi|190649113|gb|EDV46391.1| GG18240 [Drosophila erecta]
gi|194188357|gb|EDX01941.1| GE15956 [Drosophila yakuba]
Length = 76
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++++ L GR + G+LR FD F NVVL+ E +G+ VIRG ++V++
Sbjct: 16 RMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEEC---KDNTKNNIGMVVIRGNSIVMVEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|242018957|ref|XP_002429935.1| membrane-associated protein, putative [Pediculus humanus
corporis]
gi|212514981|gb|EEB17197.1| membrane-associated protein, putative [Pediculus humanus
corporis]
Length = 76
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR++ G+LR FD F N+V++ + E I + +I G+ VIRG +VV++
Sbjct: 16 KLALKLNGGRQVNGILRGFDPFMNLVIDESVE-ICKNGTHNNI--GMVVIRGNSVVMLEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|302409510|ref|XP_003002589.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261358622|gb|EEY21050.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 221
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFA 23
K++V LRDGRKL+G+LRS+DQF
Sbjct: 52 KLMVALRDGRKLIGVLRSWDQFG 74
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 37 GDLYCDIPLGLYVIRGENVVLIGEL 61
G LY DI G++++RGENV+L+GE+
Sbjct: 150 GGLYADIKRGVFLVRGENVLLLGEI 174
>gi|190346690|gb|EDK38837.2| hypothetical protein PGUG_02935 [Meyerozyma guilliermondii ATCC
6260]
Length = 84
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Query: 11 KLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
K+ G +R FD+F N+V++ A E I+ D ++PLG +++G+N+ LI ++
Sbjct: 36 KIQGRIRGFDEFMNIVIDDAVE--ILKD--SEVPLGRILLKGDNITLISSVE 83
>gi|195144580|ref|XP_002013274.1| GL24044 [Drosophila persimilis]
gi|198452776|ref|XP_002137534.1| GA26490 [Drosophila pseudoobscura pseudoobscura]
gi|194102217|gb|EDW24260.1| GL24044 [Drosophila persimilis]
gi|198132072|gb|EDY68092.1| GA26490 [Drosophila pseudoobscura pseudoobscura]
Length = 76
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++++ L GR + G+LR FD F NVVL+ E +G+ VIRG ++VL+
Sbjct: 16 RMMLKLNGGRAVTGILRGFDPFMNVVLDDTIEEC---KDKTKNNVGMVVIRGNSIVLVEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|402861349|ref|XP_003895059.1| PREDICTED: small nuclear ribonucleoprotein G-like [Papio anubis]
Length = 76
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR++ G+L+ FD F N+V++ E I G +G+ VIRG N++++
Sbjct: 16 KLSLKLNGGRRVQGILQGFDPFMNLVIDECVEMAISGQQNN---IGMVVIRGNNIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|353237783|emb|CCA69748.1| probable small nuclear ribonucleoprotein chain D2 [Piriformospora
indica DSM 11827]
Length = 122
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG 46
+IL+ LR+ RKLL +++FD+ +N+VLE V +++ + P G
Sbjct: 53 QILISLRNNRKLLARVKAFDRHSNMVLEN------VKEMWTETPSG 92
>gi|296421463|ref|XP_002840284.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636499|emb|CAZ84475.1| unnamed protein product [Tuber melanosporum]
Length = 76
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ + +G VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGILRGYDVFLNIVLDDAIEEKDGGE---KVRIGTVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|330835854|ref|YP_004410582.1| like-Sm ribonucleoprotein, core [Metallosphaera cuprina Ar-4]
gi|329567993|gb|AEB96098.1| like-Sm ribonucleoprotein, core [Metallosphaera cuprina Ar-4]
Length = 75
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+LV L+ +++ G L+S+DQ N+VL + E + + + +G VIRG+NV+LI +
Sbjct: 17 VLVKLKGNKEVRGYLKSYDQHMNLVLSDSVE---IQNNNDEKKMGTIVIRGDNVILISPI 73
>gi|390981169|pdb|4EMK|C Chain C, Crystal Structure Of Splsm567
Length = 113
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV---GDLYCDI-PLGLYVIRGENVV 56
+I GR++ G+L+ FDQ N+VL+ E++ G L I LGL V+RG +V
Sbjct: 35 RIQATFTGGRQITGILKGFDQLXNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLV 94
Query: 57 LIGELDLEKEELP 69
LI D EE+P
Sbjct: 95 LIAPXD-GSEEIP 106
>gi|146418481|ref|XP_001485206.1| hypothetical protein PGUG_02935 [Meyerozyma guilliermondii ATCC
6260]
Length = 84
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Query: 11 KLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
K+ G +R FD+F N+V++ A E I+ D ++PLG +++G+N+ LI ++
Sbjct: 36 KIQGRIRGFDEFMNIVIDDAVE--ILKD--SEVPLGRILLKGDNITLISSVE 83
>gi|242799446|ref|XP_002483380.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
stipitatus ATCC 10500]
gi|218716725|gb|EED16146.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
stipitatus ATCC 10500]
Length = 77
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G LG+ VIRG +VV++
Sbjct: 15 RLFVQLNGNRKVIGILRGYDVFMNIVLDDAVEEKPDG---GKDRLGMVVIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|429216595|ref|YP_007174585.1| small nuclear ribonucleoprotein [Caldisphaera lagunensis DSM
15908]
gi|429133124|gb|AFZ70136.1| small nuclear ribonucleoprotein [Caldisphaera lagunensis DSM
15908]
Length = 79
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+LV ++ R++ G+L S+DQ N++LE A E + G + PLGL ++RG+NV+ +
Sbjct: 23 VLVKMKGNREVKGILTSYDQHLNLILEKAEE--LEGKV--SRPLGLVLLRGDNVIAV 75
>gi|67468165|ref|XP_650141.1| small nuclear ribonucleo protein G [Entamoeba histolytica
HM-1:IMSS]
gi|56466712|gb|EAL44755.1| small nuclear ribonucleo protein G, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407041678|gb|EKE40885.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449707868|gb|EMD47446.1| small nuclear ribonucleo protein G, putative [Entamoeba
histolytica KU27]
Length = 81
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+ILV + R ++G+L +D++ N+VL+ A + D IP+G+ +IRG +++ +
Sbjct: 15 RILVKIHGKRSIIGVLSGYDEYMNLVLDEAYDA-SNPDTDKHIPIGMIMIRGNSILSVET 73
Query: 61 LDLEKEELPAHMT 73
+D P H T
Sbjct: 74 ID------PVHTT 80
>gi|413918445|gb|AFW58377.1| hypothetical protein ZEAMMB73_585309 [Zea mays]
Length = 70
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYC 41
K++VLLRDGRKLLG L SFDQF C + ++C
Sbjct: 31 KLIVLLRDGRKLLGTLCSFDQFGIPFCSHFCA--VFSSIFC 69
>gi|156541626|ref|XP_001601035.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Nasonia vitripennis]
Length = 76
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR ++G+LR FD F N+V++ + E G +G+ VIRG +V+++
Sbjct: 16 KLSLKLNGGRHVIGILRGFDPFMNMVIDESIEECKDGTKNN---IGMVVIRGNSVIMLEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|443719153|gb|ELU09428.1| hypothetical protein CAPTEDRAFT_156804 [Capitella teleta]
Length = 76
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L GR + G LR FD F N+V++ A E+ G+ +G+ V+RG ++ L+ LD
Sbjct: 21 LNGGRVVTGTLRGFDPFMNLVVDEAIEQCKTGEQNS---IGMVVVRGNSITLLEALD 74
>gi|66525153|ref|XP_625205.1| PREDICTED: probable small nuclear ribonucleoprotein G [Apis
mellifera]
gi|380016176|ref|XP_003692064.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Apis
florea]
Length = 76
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR ++G+LR FD F N+V++ + E G +G+ VIRG +V+++
Sbjct: 16 KLSLKLNGGRHVIGILRGFDPFMNMVIDESIEECKDG---TKNNIGMVVIRGNSVIMLEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|357511115|ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
gi|87240819|gb|ABD32677.1| Like-Sm ribonucleoprotein-related, core [Medicago truncatula]
gi|355500861|gb|AES82064.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
Length = 80
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ + L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV +
Sbjct: 17 QLQIKLNANRMIVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|384244771|gb|EIE18269.1| small nuclear ribonucleo protein polypeptide G [Coccomyxa
subellipsoidea C-169]
Length = 73
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V L R++ G+LR FDQF N+VL+ A + D +G+ V+RG +++ +
Sbjct: 16 KLSVSLNANRQVTGVLRGFDQFMNIVLDNAVDEKNKTD------IGMVVVRGNSIISLEA 69
Query: 61 LD 62
L+
Sbjct: 70 LE 71
>gi|308321244|gb|ADO27774.1| small nuclear ribonucleoprotein g [Ictalurus furcatus]
Length = 76
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ + E G P+G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRHVQGILRGFDPFMNLVVDDSIEISAGGQQN---PIGMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|325959826|ref|YP_004291292.1| snRNP Sm-like protein [Methanobacterium sp. AL-21]
gi|325331258|gb|ADZ10320.1| snRNP Sm-like protein [Methanobacterium sp. AL-21]
Length = 80
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++L+ L+ GR+ GLL+SFD N+VL A E + L LG+ +IRG+N+V I
Sbjct: 23 QVLIELKGGREFRGLLKSFDMHMNLVLNEAEE---LDGLETAKRLGIVLIRGDNIVYI 77
>gi|429327915|gb|AFZ79675.1| small nuclear ribonucleoprotein G, putative [Babesia equi]
Length = 81
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVV 56
V L R ++G+LR +D F N+VL+ A E +VGD I LG+ V+RG +++
Sbjct: 22 VHLNGSRHVVGVLRGYDTFMNIVLDNALE--VVGD--DQIDLGIVVLRGNSII 70
>gi|308810487|ref|XP_003082552.1| putative small nuclear ribonucleoprotein E (ISS) [Ostreococcus
tauri]
gi|116061021|emb|CAL56409.1| putative small nuclear ribonucleoprotein E (ISS) [Ostreococcus
tauri]
Length = 101
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R + G+LR FDQF N+VL+ + P+G+ V+RG +VV +
Sbjct: 34 KLRLRLNGNRSVTGILRGFDQFLNLVLDDSTNDTTTE----KTPMGMVVVRGNSVVSMEA 89
Query: 61 LD 62
L+
Sbjct: 90 LE 91
>gi|410730333|ref|XP_003671346.2| hypothetical protein NDAI_0G03260 [Naumovozyma dairenensis CBS
421]
gi|401780164|emb|CCD26103.2| hypothetical protein NDAI_0G03260 [Naumovozyma dairenensis CBS
421]
Length = 76
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGL-YVIRGENVVLIG 59
KIL+ L RK+ G+LR +D F NVV++ A E G + LG+ VIRG ++V +
Sbjct: 14 KILIQLNGSRKIAGILRGYDIFLNVVIDDAVEVSADGSKH---QLGIQTVIRGNSIVALE 70
Query: 60 ELD 62
LD
Sbjct: 71 ALD 73
>gi|332018098|gb|EGI58712.1| Putative small nuclear ribonucleoprotein G [Acromyrmex
echinatior]
Length = 76
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L GR+++G+LR FD F N+V++ + E G +G+ VIRG +V+++ LD
Sbjct: 21 LNGGRRVVGILRGFDPFMNMVIDESIEECKDG---TKNNIGMVVIRGNSVIMLEALD 74
>gi|342326346|gb|AEL23088.1| small nuclear ribonucleoprotein polypeptide G [Cherax
quadricarinatus]
Length = 77
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+++ L GR + G LR FD F N+V++ E GD + +G+ VIRG +++++
Sbjct: 16 RVMTKLNGGRVVEGTLRGFDPFMNLVVDDGVEARKTGD---RVRIGVVVIRGSSIIMLEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|145329599|ref|NP_001077949.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|330252410|gb|AEC07504.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 67
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R + G LR FDQF N+V++ E + G+ DI G+ VIRG ++V +
Sbjct: 4 KLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSIVTVEA 59
Query: 61 LD 62
L+
Sbjct: 60 LE 61
>gi|402217994|gb|EJT98072.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 111
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG 46
+IL+ LR+ RKLL +++FD+ N+VLE V +++ ++P G
Sbjct: 42 QILISLRNNRKLLARVKAFDRHTNMVLEN------VKEMWTEVPKG 81
>gi|429327489|gb|AFZ79249.1| small nuclear ribonucleoprotein-associated protein B, putative
[Babesia equi]
Length = 153
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACE--RIIVGDLYCDI--PLGLYVIRGENVVL 57
+ V ++DGRK +G L +FD+ N+VL CE R+ G +I LG ++RGEN+V
Sbjct: 16 VRVTVKDGRKFVGTLIAFDKHMNLVLA-DCEEFRMTKGKEGKEIKRTLGFILLRGENIVS 74
Query: 58 IGELDLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEFLDFD 107
K A + A +A A + ++ G ++ M + +
Sbjct: 75 F----TAKAPPAASLMPFGAAGPGKAIPAGRGTPIMPGMTQQGMPHMQPN 120
>gi|340725441|ref|XP_003401078.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Bombus terrestris]
gi|350403951|ref|XP_003486961.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Bombus impatiens]
gi|307172241|gb|EFN63758.1| Probable small nuclear ribonucleoprotein G [Camponotus
floridanus]
Length = 76
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L GR ++G+LR FD F N+V++ + E G +G+ VIRG +V+++ LD
Sbjct: 21 LNGGRHVIGILRGFDPFMNMVIDESVEECKDG---TKNNIGMVVIRGNSVIMLEALD 74
>gi|403332734|gb|EJY65407.1| Small nuclear riboprotein Sm D2 [Oxytricha trifallax]
Length = 103
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACE 32
++LV R+ RKLLG +++FD+ N+VLE CE
Sbjct: 31 QVLVNCRNNRKLLGRVKAFDRHMNMVLENVCE 62
>gi|84489967|ref|YP_448199.1| small nuclear ribonucleoprotein [Methanosphaera stadtmanae DSM
3091]
gi|84373286|gb|ABC57556.1| putative snRNP Sm-like protein [Methanosphaera stadtmanae DSM
3091]
Length = 81
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++L+ L+ G++ G L+SFD N+VL A E I G+ C LG+ ++RG+N+V I
Sbjct: 24 QVLIKLKGGKEFRGALQSFDMHMNLVLNDA-EEIKDGESIC--RLGVVLVRGDNIVYI 78
>gi|118575248|ref|YP_874991.1| small nuclear ribonucleoprotein [Cenarchaeum symbiosum A]
gi|118193769|gb|ABK76687.1| small nuclear ribonucleoprotein [Cenarchaeum symbiosum A]
Length = 78
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+L+ L+ G+ + G L FDQ N++LE + E + G+ LG V+RG+NVV+I
Sbjct: 18 VLIKLKGGKAIRGNLLGFDQHMNLLLESSEEIPVEGETRT---LGTIVVRGDNVVII 71
>gi|354546754|emb|CCE43486.1| hypothetical protein CPAR2_211300 [Candida parapsilosis]
Length = 73
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVV 56
K+ V L RK++G+LR +D F NV + A E I G+ + +G+ VIRG ++V
Sbjct: 15 KVSVQLNGSRKVIGILRGYDIFLNVTISDALEERIDGE---KLNIGITVIRGNSIV 67
>gi|91093719|ref|XP_967705.1| PREDICTED: similar to small nuclear ribonucleoprotein G
[Tribolium castaneum]
gi|270012988|gb|EFA09436.1| hypothetical protein TcasGA2_TC010648 [Tribolium castaneum]
Length = 76
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR+++G+LR FD F N+V++ + E G +G+ VIRG ++V++
Sbjct: 16 KLCLKLNGGRQVVGILRGFDPFMNLVVDESVEECRDGKKN---NIGMVVIRGNSIVMLEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|85080278|ref|XP_956512.1| hypothetical protein NCU01601 [Neurospora crassa OR74A]
gi|16416020|emb|CAB91370.2| related to LSM1 protein [Neurospora crassa]
gi|28917579|gb|EAA27276.1| predicted protein [Neurospora crassa OR74A]
Length = 165
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
Query: 23 ANVVLEGACERIIVGD----------LYCDIPLGLYVIRGENVVLIGEL 61
N+VL+ ERI V LY D+ GL+V+RGENV+L+GE+
Sbjct: 60 TNLVLQQTKERIFVPPGTQSPTQTRGLYADVDRGLFVVRGENVLLMGEI 108
>gi|388493710|gb|AFK34921.1| unknown [Medicago truncatula]
Length = 81
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ + L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV +
Sbjct: 17 QLQIKLNANRMIVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVVTVEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|353234457|emb|CCA66482.1| related to snRNP protein [Piriformospora indica DSM 11827]
Length = 158
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-PLGLYVIRGENVVLIG 59
K+ V GR++ G+L+ FDQ N+VL+ E+ V +L + LGL V+RG V LI
Sbjct: 86 KVRVTFTGGRQVTGILKGFDQLLNLVLDQVEEQ--VSELQQNPRQLGLAVVRGPTVTLIA 143
Query: 60 ELD 62
D
Sbjct: 144 PDD 146
>gi|323454582|gb|EGB10452.1| hypothetical protein AURANDRAFT_9439, partial [Aureococcus
anophagefferens]
Length = 62
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRG 52
++L+ R RKL+G LR +DQF N+V+E A E++ L +G VIRG
Sbjct: 14 RLLIKARARRKLVGTLRGYDQFMNLVVEDAIEQV---SLTEKNEIGTVVIRG 62
>gi|388583928|gb|EIM24229.1| Sm-like ribonucleo protein [Wallemia sebi CBS 633.66]
Length = 111
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG 46
+ILV LR+ RKLL +++FD+ +N+VLE V +++ + P G
Sbjct: 42 QILVSLRNNRKLLARVKAFDRHSNMVLEN------VKEMWTETPKG 81
>gi|378732523|gb|EHY58982.1| small nuclear ribonucleoprotein G [Exophiala dermatitidis
NIH/UT8656]
Length = 80
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G+LR +D F N+VL+ A E G+ LG+ IRG +VV++
Sbjct: 15 RLFVQLNGNRKVIGVLRGYDVFLNIVLDDAVEEKAGGERER---LGMVAIRGNSVVMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|440583672|emb|CCH47178.1| similar to small nuclear ribonucleoprotein G-like [Lupinus
angustifolius]
Length = 88
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV + L+
Sbjct: 31 LNANRMIVGTLRGFDQFMNLVVDNTVE--VNGNEKTDI--GMVVIRGNSVVTVEALE 83
>gi|389739270|gb|EIM80464.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 111
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 19/71 (26%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG-------------L 47
++L+ LR+ +KLL +++FD+ +N+VLE V +++ +IP G
Sbjct: 42 QVLISLRNNKKLLARVKAFDRHSNMVLEN------VKEMWTEIPKGKNKKPVNKDRFISK 95
Query: 48 YVIRGENVVLI 58
+RG++V+LI
Sbjct: 96 MFLRGDSVILI 106
>gi|114050793|ref|NP_001040405.1| small nuclear ribonucleoprotein G [Bombyx mori]
gi|95102770|gb|ABF51326.1| small nuclear ribonucleoprotein G [Bombyx mori]
Length = 76
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K + L GR + G+LR FD F N+VL+ + E G +G+ VIRG +++++
Sbjct: 16 KWSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNN---VGMVVIRGNSIIMLES 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|448513188|ref|XP_003866888.1| Smx2 protein [Candida orthopsilosis Co 90-125]
gi|380351226|emb|CCG21450.1| Smx2 protein [Candida orthopsilosis Co 90-125]
Length = 90
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVV 56
K+ V L RK++G+LR +D F NV + A E I G+ + +G+ VIRG ++V
Sbjct: 15 KVSVQLNGSRKVIGILRGYDIFLNVTISDALEERIDGE---KLNIGITVIRGNSIV 67
>gi|398397857|ref|XP_003852386.1| hypothetical protein MYCGRDRAFT_104681 [Zymoseptoria tritici
IPO323]
gi|339472267|gb|EGP87362.1| hypothetical protein MYCGRDRAFT_104681 [Zymoseptoria tritici
IPO323]
Length = 93
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ V L RK++G LR +D F N+VL+ A E + + LG+ VIRG +VV++
Sbjct: 15 RVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNAE---KVRLGMCVIRGNSVVMMEA 71
Query: 61 L 61
L
Sbjct: 72 L 72
>gi|425781950|gb|EKV19884.1| Small nuclear ribonucleoprotein SmG, putative [Penicillium
digitatum PHI26]
Length = 85
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ L RK++G+LR +D F N+VL+ A E G+ + G+ VIRG ++V++
Sbjct: 22 RVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFEEKDGGE---KVSAGMVVIRGNSIVMLEA 78
Query: 61 LD 62
L+
Sbjct: 79 LE 80
>gi|118388573|ref|XP_001027383.1| Sm protein [Tetrahymena thermophila]
gi|89309153|gb|EAS07141.1| Sm protein [Tetrahymena thermophila SB210]
Length = 103
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLY 48
++L+ LR+ RK+L +R+FD+ N+VLE E ++ ++P G +
Sbjct: 30 QVLIALRNNRKMLAKVRAFDRHMNMVLENVLE------MWTEVPRGSH 71
>gi|322800993|gb|EFZ21774.1| hypothetical protein SINV_00836 [Solenopsis invicta]
Length = 76
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L GR ++G+LR FD F N+V++ + E G +G+ VIRG +V+++ LD
Sbjct: 21 LNGGRTVIGILRGFDPFMNMVIDESIEECKDG---TKNNIGMVVIRGNSVIMLEALD 74
>gi|109048997|ref|XP_001112504.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
Length = 76
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+L+ FD F N+V++ E I G +G+ VIRG N++++
Sbjct: 16 KLSLKLNGGRHVQGILQGFDPFMNLVIDECVEMAISGQQNN---IGMVVIRGNNIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|134116118|ref|XP_773230.1| hypothetical protein CNBJ0090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255852|gb|EAL18583.1| hypothetical protein CNBJ0090 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 78
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ + L+ GR++ G+LR +D F N+V++ A E + G P G+ VIRG +V +
Sbjct: 16 RLFLHLQGGRQISGVLRGYDMFLNLVVDSAFEELGGGQRK---PCGMVVIRGNSVSAMEL 72
Query: 61 LDLEK 65
LD ++
Sbjct: 73 LDNQR 77
>gi|12838881|dbj|BAB24361.1| unnamed protein product [Mus musculus]
gi|12849807|dbj|BAB28489.1| unnamed protein product [Mus musculus]
Length = 71
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 47 LYVIRGENVVLIGELDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
++V+RGENVVL+GE+DLEKE + VS EI Q+ ++
Sbjct: 1 IFVVRGENVVLLGEIDLEKES-DTPLQQVSIEEILEEQRVQQQT 43
>gi|405122533|gb|AFR97299.1| hypothetical protein CNAG_04914 [Cryptococcus neoformans var.
grubii H99]
Length = 78
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ + L+ GR++ G+LR +D F N+V++ A E + G P G+ VIRG +V +
Sbjct: 16 RLFLHLQGGRQISGVLRGYDMFLNLVVDNAFEELGGGQRK---PCGMVVIRGNSVSAMEL 72
Query: 61 LDLEK 65
LD ++
Sbjct: 73 LDNQR 77
>gi|388514393|gb|AFK45258.1| unknown [Medicago truncatula]
Length = 81
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L R ++G LR FDQF N+V++ E + G+ DI G+ VIRG +VV + L+
Sbjct: 22 LNANRMIVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVVTVEALE 74
>gi|388492630|gb|AFK34381.1| unknown [Lotus japonicus]
Length = 80
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L R ++G LR +DQF N+V++ E + G+ DI G+ VIRG +VV + L+
Sbjct: 22 LNANRMIVGTLRGYDQFMNMVVDNTVE--VNGNEKNDI--GMVVIRGNSVVTVEALE 74
>gi|164657289|ref|XP_001729771.1| hypothetical protein MGL_3315 [Malassezia globosa CBS 7966]
gi|159103664|gb|EDP42557.1| hypothetical protein MGL_3315 [Malassezia globosa CBS 7966]
Length = 104
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVI 50
++L+ LR+ +KLL +++FD+ +N+VLE V +++ ++P G + +
Sbjct: 42 QVLISLRNNKKLLARVKAFDRHSNMVLEN------VKEMWTEVPFGRFKV 85
>gi|119719338|ref|YP_919833.1| like-Sm ribonucleoprotein, core [Thermofilum pendens Hrk 5]
gi|119524458|gb|ABL77830.1| Like-Sm ribonucleoprotein, core [Thermofilum pendens Hrk 5]
Length = 73
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+LV L+ GR++ G L+S+D N+VLE A E I G LG ++RG+NV+L+
Sbjct: 16 NVLVKLKGGREIRGQLKSYDYHLNLVLENAEE--IRGTRTRQ--LGTIIVRGDNVILV 69
>gi|448729283|ref|ZP_21711600.1| small nuclear ribonucleoprotein, lsm family [Halococcus
saccharolyticus DSM 5350]
gi|445795230|gb|EMA45759.1| small nuclear ribonucleoprotein, lsm family [Halococcus
saccharolyticus DSM 5350]
Length = 79
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLE---GACERIIVGDLYCDIPLGLYVIRGENVVL 57
+ V L+DG G L +DQ NVVLE G E G++ + +IRG+NVV
Sbjct: 17 SVAVRLKDGEIYTGSLAGYDQHMNVVLEPASGDAEPPTPGEVGVETVESTTIIRGDNVVT 76
Query: 58 I 58
I
Sbjct: 77 I 77
>gi|443684081|gb|ELT88113.1| hypothetical protein CAPTEDRAFT_124620, partial [Capitella
teleta]
Length = 100
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD----LYCDI-PLGLYVIRGENVV 56
+ V GR+ G+L+ FD N+VL+G E + D L D PLGL V RG +VV
Sbjct: 21 VRVKFSGGREACGILKGFDPLLNLVLDGCTENLRDPDDPFKLTEDTRPLGLVVCRGNSVV 80
Query: 57 LI 58
LI
Sbjct: 81 LI 82
>gi|383851818|ref|XP_003701428.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Megachile rotundata]
Length = 76
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L GR ++G+LR FD F N+V++ + E G +G+ VIRG +V+++ LD
Sbjct: 21 LNGGRHVVGILRGFDPFMNMVIDESIEECKDG---TKNNIGMVVIRGNSVIMLEALD 74
>gi|390331570|ref|XP_788177.3| PREDICTED: small nuclear ribonucleoprotein G-like
[Strongylocentrotus purpuratus]
Length = 77
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L R++ G+LR FD F N+V++ A E I DI G+ V+RG +++L+ LD
Sbjct: 21 LNGNRRVTGVLRGFDPFMNLVIDEATEDISTTQ-KNDI--GMVVVRGNSIILLEALD 74
>gi|378730773|gb|EHY57232.1| small nuclear ribonucleoprotein [Exophiala dermatitidis NIH/UT8656]
Length = 138
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACE--RIIVGDLYCDIPLGLYVIRGENVVLI 58
+I V GR+++G L+ +DQ N+VL+ E R G+ PLGL V RG +VLI
Sbjct: 61 QITVKFNGGREIVGTLKGYDQLMNLVLDDVKETMRDDEGN-ETTRPLGLVVARGTLLVLI 119
Query: 59 GELDLEKE 66
LD +E
Sbjct: 120 SPLDGSEE 127
>gi|403372169|gb|EJY85976.1| Small nuclear ribonucleoprotein G, putative [Oxytricha trifallax]
Length = 709
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L R + G+L+ +DQF N+VL+ A E II D + LG VIRG +VV+ LD
Sbjct: 23 LNANRHVAGVLKGYDQFLNIVLDNAIE-IINKDEKRE--LGTIVIRGNSVVMWENLD 76
>gi|195447608|ref|XP_002071290.1| GK25208 [Drosophila willistoni]
gi|194167375|gb|EDW82276.1| GK25208 [Drosophila willistoni]
Length = 76
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++++ L GR + G+LR FD F NVVL+ E +G+ VIRG ++V++
Sbjct: 16 RMMLKLNGGRAVNGILRGFDPFMNVVLDDTIEEC---KDNTKNNIGMVVIRGNSIVMVEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|402077934|gb|EJT73283.1| hypothetical protein GGTG_10128 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 101
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV---GDL-YCDIP-LGLYVIRGENV 55
++++L DGR ++G L + D +NV+L ER + GD D P +G +IRG +
Sbjct: 12 RVVILTTDGRFIMGTLVNSDNQSNVILTNVTERHVAPHDGDSDTVDRPSVGAEIIRGATI 71
Query: 56 VLIGELD 62
+L+G LD
Sbjct: 72 LLVGLLD 78
>gi|51858986|gb|AAH81512.1| Zgc:103688 [Danio rerio]
gi|182890240|gb|AAI65520.1| Zgc:103688 protein [Danio rerio]
Length = 76
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ E G + +G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRHVQGILRGFDPFMNLVVDDTIEMAPGGQMNT---IGMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|389631877|ref|XP_003713591.1| hypothetical protein MGG_04539 [Magnaporthe oryzae 70-15]
gi|351645924|gb|EHA53784.1| hypothetical protein MGG_04539 [Magnaporthe oryzae 70-15]
gi|440467862|gb|ELQ37056.1| hypothetical protein OOU_Y34scaffold00619g29 [Magnaporthe oryzae
Y34]
gi|440478608|gb|ELQ59427.1| hypothetical protein OOW_P131scaffold01358g67 [Magnaporthe oryzae
P131]
Length = 101
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV---GDL-YCDIP-LGLYVIRGENV 55
+++++ DGR L+G L + D AN++L ER I GD D P +G +IRG +
Sbjct: 12 RVVIMTTDGRMLIGTLINSDNQANIILYNVTERHIAPADGDEDSVDRPSVGTEIIRGSTI 71
Query: 56 VLIGELDLEKE 66
+++G +D E E
Sbjct: 72 LVVGLVDEELE 82
>gi|268834043|ref|NP_001161373.1| small nuclear ribonucleoprotein polypeptide G isoform 1 [Danio
rerio]
gi|268834149|ref|NP_001004660.2| small nuclear ribonucleoprotein polypeptide G isoform 2 [Danio
rerio]
Length = 76
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ E G + +G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRHVQGILRGFDPFMNLVVDDTIEMAPGGQMNT---IGMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|409083385|gb|EKM83742.1| hypothetical protein AGABI1DRAFT_124072 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 111
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 6/46 (13%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG 46
++L+ LR+ +KLL +++FD+ +N+VLE V +++ +IP G
Sbjct: 42 QVLISLRNNKKLLARVKAFDRHSNMVLEN------VKEMWTEIPKG 81
>gi|146304997|ref|YP_001192313.1| Sm ribonucleoprotein-like protein [Metallosphaera sedula DSM
5348]
gi|145703247|gb|ABP96389.1| Small nuclear ribonucleoprotein, LSM family [Metallosphaera
sedula DSM 5348]
Length = 75
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+LV L+ +++ GLL+S+DQ N+VL + E G+ +G VIRG+NV+LI
Sbjct: 17 VLVKLKGNKEVRGLLKSYDQHMNLVLSDSEEIQSDGE---GKKMGTIVIRGDNVILI 70
>gi|390336863|ref|XP_001199475.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Strongylocentrotus purpuratus]
Length = 90
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+ V+ DGR+++G L+ FDQ N++L+ + ER+ Y + V++ ++ +IGE
Sbjct: 12 TVSVITNDGRQIVGTLKGFDQTINLILDESHERV-----YSNTAEVEQVVQVDSRAVIGE 66
Query: 61 LD 62
+D
Sbjct: 67 VD 68
>gi|307214549|gb|EFN89534.1| Probable small nuclear ribonucleoprotein G [Harpegnathos
saltator]
Length = 76
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ E G +G+ VIRG +V+++
Sbjct: 16 KLSLKLNAGRHVTGILRGFDPFMNMVIDETVEECKDG---TKNNIGMVVIRGNSVIMLEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|303276468|ref|XP_003057528.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461880|gb|EEH59173.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 71
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-PLGLYVIRGENVVLIG 59
K+ + L R +LG+LR FDQF N+VL+ C V D D PLG+ V+RG ++ +
Sbjct: 4 KLRLKLNGNRGVLGVLRGFDQFLNLVLD-EC----VDDSTSDKEPLGMVVVRGNSISALE 58
Query: 60 ELDLEKEELPA 70
L E +PA
Sbjct: 59 AL----EHIPA 65
>gi|448734412|ref|ZP_21716638.1| small nuclear ribonucleoprotein, lsm family [Halococcus
salifodinae DSM 8989]
gi|445800460|gb|EMA50815.1| small nuclear ribonucleoprotein, lsm family [Halococcus
salifodinae DSM 8989]
Length = 79
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGA---CERIIVGDLYCDIPLGLYVIRGENVVL 57
+ V L+DG G L +DQ NVVLE A E G++ + +IRG+NVV
Sbjct: 17 SVAVRLKDGEIYTGSLAGYDQHMNVVLEPASNDAEPPTPGEVGVETVESTTIIRGDNVVT 76
Query: 58 I 58
I
Sbjct: 77 I 77
>gi|332376801|gb|AEE63540.1| unknown [Dendroctonus ponderosae]
Length = 76
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR++ G+LR FD F N+V++ + E G +G+ VIRG ++V++
Sbjct: 16 KLCLKLNGGRQVTGILRGFDPFMNLVVDESIEECRDGTKN---NIGMVVIRGNSIVMLEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|336363390|gb|EGN91783.1| hypothetical protein SERLA73DRAFT_148178 [Serpula lacrymans var.
lacrymans S7.3]
Length = 92
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+I V GR+++G+L+ +DQ N+VL+ E+I + + LGL V+RG + L+
Sbjct: 19 RIRVKFTGGREVVGILKGYDQLLNLVLDEVEEQINEPEPHSR-SLGLAVLRGPTITLVSP 77
Query: 61 LD 62
+D
Sbjct: 78 VD 79
>gi|71021395|ref|XP_760928.1| hypothetical protein UM04781.1 [Ustilago maydis 521]
gi|46101003|gb|EAK86236.1| hypothetical protein UM04781.1 [Ustilago maydis 521]
gi|343426204|emb|CBQ69735.1| probable small nuclear ribonucleoprotein chain D2 [Sporisorium
reilianum SRZ2]
gi|443900125|dbj|GAC77452.1| 17 beta-hydroxysteroid dehydrogenase type 3 [Pseudozyma antarctica
T-34]
Length = 111
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 19/71 (26%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG-------------L 47
+IL+ LR+ +KLL +++FD+ +N+VLE V +++ ++P G
Sbjct: 42 QILIALRNNKKLLARVKAFDRHSNMVLEN------VKEMWTEVPKGKGKKPVNKDRFISK 95
Query: 48 YVIRGENVVLI 58
+RG++VVL+
Sbjct: 96 MFLRGDSVVLV 106
>gi|388857230|emb|CCF49243.1| probable small nuclear ribonucleoprotein chain D2 [Ustilago hordei]
Length = 111
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 19/71 (26%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG-------------L 47
+IL+ LR+ +KLL +++FD+ +N+VLE V +++ ++P G
Sbjct: 42 QILIALRNNKKLLARVKAFDRHSNMVLEN------VKEMWTEVPKGKGKKPVNKDRFISK 95
Query: 48 YVIRGENVVLI 58
+RG++VVL+
Sbjct: 96 MFLRGDSVVLV 106
>gi|221219684|gb|ACM08503.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 126
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP-----LGLYVIRGENV 55
+I V + GR+ G+L+ FD N+VL+ E + D + LGL V RG +V
Sbjct: 26 QIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQLGLVVCRGTSV 85
Query: 56 VLIGELD-LEKEELPAHMTCVSTA 78
VLI D +E P H C S +
Sbjct: 86 VLICPQDGMEAIPCPFHTRCTSRS 109
>gi|340501173|gb|EGR27984.1| small nuclear ribonucleoprotein sm d2, putative [Ichthyophthirius
multifiliis]
Length = 103
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLY 48
++L+ LR+ RK+L +R+FD+ N+VLE E ++ ++P G +
Sbjct: 30 QVLIALRNNRKILARVRAFDRHMNMVLENVLE------MWTEVPRGSH 71
>gi|328770153|gb|EGF80195.1| hypothetical protein BATDEDRAFT_11709 [Batrachochytrium
dendrobatidis JAM81]
Length = 70
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENV 55
K+ V L RK+ G+LR +D F N+VLE A E + GD + LG V+RG ++
Sbjct: 8 KLFVQLNGNRKVTGVLRGYDPFMNIVLEDASEEL--GDGEKNF-LGSIVVRGNSI 59
>gi|332796496|ref|YP_004457996.1| Sm1 protein [Acidianus hospitalis W1]
gi|332694231|gb|AEE93698.1| archaeal Sm1 protein [Acidianus hospitalis W1]
Length = 76
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+LV L+ +++ GLL+S+DQ N+VL + E I D +G VIRG+NV+LI
Sbjct: 17 VLVKLKGNKEVRGLLKSYDQHMNLVLSDSEE--IQSD-GSGKKIGTIVIRGDNVILI 70
>gi|284413738|ref|NP_001165121.1| small nuclear ribonucleoprotein polypeptide G [Xenopus laevis]
gi|114107958|gb|AAI23340.1| MGC154809 protein [Xenopus laevis]
Length = 76
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + + GR++ G+LR FD F N+VL+ + E G+ +G+ VIRG +++++
Sbjct: 16 KLSLKINGGRQVQGILRGFDPFMNLVLDESTEISGSGNQNS---IGMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|313217530|emb|CBY38609.1| unnamed protein product [Oikopleura dioica]
gi|313236587|emb|CBY19879.1| unnamed protein product [Oikopleura dioica]
Length = 76
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
K+ V + GRK+ G+LR FD F N+V++ A E + +G+ VIRG +V++I
Sbjct: 16 KMSVKVNGGRKVEGVLRGFDPFMNLVIDDAIEYRKDNSSHT---MGMCVIRGNSVLMI 70
>gi|313213028|emb|CBY36907.1| unnamed protein product [Oikopleura dioica]
gi|313234529|emb|CBY10486.1| unnamed protein product [Oikopleura dioica]
Length = 106
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERII-VGDLYCDIP----LGLYVIRGENVV 56
I V + GR+ G+L+ FDQ N+V++ E++ V D Y LGL V RG +VV
Sbjct: 29 IRVKFQGGREASGILKGFDQLLNLVIDSTTEQLRDVDDPYRPSTESRNLGLVVCRGTSVV 88
Query: 57 LIGELD 62
LI D
Sbjct: 89 LISPQD 94
>gi|126647281|ref|XP_001388059.1| small nuclear ribonucleoprotein [Cryptosporidium parvum Iowa II]
gi|126117147|gb|EAZ51247.1| small nuclear ribonucleoprotein, putative [Cryptosporidium parvum
Iowa II]
Length = 92
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 1 KILVLLRDGRKLL--GLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ + L D + L+ G+++ FD++ N+VL+ A E ++ + +G ++RGEN+ LI
Sbjct: 29 RVQIWLYDHKNLVLEGVIQGFDEYMNIVLDQASEVYTKKEVRRETSVGQLLLRGENISLI 88
Query: 59 GE 60
E
Sbjct: 89 CE 90
>gi|196009502|ref|XP_002114616.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190582678|gb|EDV22750.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 76
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ + + R ++G LR FD F N+VL+ E++ + + LG+ VIRG +VV++
Sbjct: 16 RLSIKINGNRTVVGTLRGFDPFMNIVLDDTVEQVSSKE---NNHLGMVVIRGNSVVMM 70
>gi|257076617|ref|ZP_05570978.1| snRNP Sm-like protein [Ferroplasma acidarmanus fer1]
Length = 71
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
K+ +LL+D R L+G L +D++ N+ L+ A E G++ I G +IRG NVV I
Sbjct: 16 KVTLLLKDNRSLVGTLVGYDEYMNMTLDDAEEN---GEVQRKI--GKVIIRGSNVVRI 68
>gi|225710716|gb|ACO11204.1| Small nuclear ribonucleoprotein G [Caligus rogercresseyi]
Length = 79
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ + L R + G+LR +D F N+VLE E G P+G VIRG ++V++
Sbjct: 18 RVQLKLNASRNMEGILRGYDPFMNLVLEEGIETTKQGHRN---PVGTVVIRGNSIVML 72
>gi|170084079|ref|XP_001873263.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650815|gb|EDR15055.1| predicted protein [Laccaria bicolor S238N-H82]
gi|336377064|gb|EGO05399.1| hypothetical protein SERLA73DRAFT_174539 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390107|gb|EGO31250.1| hypothetical protein SERLADRAFT_456135 [Serpula lacrymans var.
lacrymans S7.9]
Length = 111
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 19/71 (26%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG-------------L 47
++L+ LR+ +KLL +++FD+ +N+VLE V +++ ++P G
Sbjct: 42 QVLISLRNNKKLLARVKAFDRHSNMVLEN------VKEMWTEVPKGKNKKPVNKDRFISK 95
Query: 48 YVIRGENVVLI 58
+RG++V+LI
Sbjct: 96 MFLRGDSVILI 106
>gi|385805901|ref|YP_005842299.1| putative snRNP Sm protein [Fervidicoccus fontis Kam940]
gi|383795764|gb|AFH42847.1| putative snRNP Sm protein [Fervidicoccus fontis Kam940]
Length = 76
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+LV L+ +++ G L+S+D N+VLE A E G LG +IRG+NV++I
Sbjct: 17 VLVKLKGNKEVRGKLKSYDHHLNIVLEDAEELFPDGQAR---KLGTVIIRGDNVIII 70
>gi|12859584|dbj|BAB31701.1| unnamed protein product [Mus musculus]
Length = 70
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 48 YVIRGENVVLIGELDLEKEELPAHMTCVSTAEIKRAQKAEKDA 90
+V+RGENVVL+GE+DLEKE + VS EI Q+ ++
Sbjct: 1 FVVRGENVVLLGEIDLEKES-DTPLQQVSIEEILEEQRVQQQT 42
>gi|58260010|ref|XP_567415.1| hypothetical protein CNJ03360 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229465|gb|AAW45898.1| hypothetical protein CNJ03360 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 71
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ + L+ GR++ G+LR +D F N+V++ A E + G P G+ VIRG +V +
Sbjct: 9 RLFLHLQGGRQISGVLRGYDMFLNLVVDSAFEELGGGQRK---PCGMVVIRGNSVSAMEL 65
Query: 61 LDLEK 65
LD ++
Sbjct: 66 LDNQR 70
>gi|17510511|ref|NP_491032.1| Protein SNR-7 [Caenorhabditis elegans]
gi|29428018|sp|Q9N4G9.1|RUXG_CAEEL RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|12276019|gb|AAG50222.1|AF303264_1 SM protein G [Caenorhabditis elegans]
gi|351062434|emb|CCD70411.1| Protein SNR-7 [Caenorhabditis elegans]
Length = 77
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
L R++ G+LR FD F N+V++ A E G + LG+ VIRG +VV++
Sbjct: 21 LNGNRRVSGILRGFDPFMNMVIDEAVEYQKDG---GSVNLGMTVIRGNSVVIM 70
>gi|320164748|gb|EFW41647.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 77
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++++ L RK+ G+LR FD F NVVL+ E + + + +G+ IRG ++ ++
Sbjct: 16 RVILKLNGNRKVSGILRGFDPFMNVVLDETFEEVSESERH---EIGMVAIRGNSINMVET 72
Query: 61 LD 62
+D
Sbjct: 73 VD 74
>gi|225711834|gb|ACO11763.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
gi|225714162|gb|ACO12927.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
gi|290562395|gb|ADD38594.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
Length = 79
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ + L R + G+LR +D F N+VLE E G P+G VIRG ++V++
Sbjct: 18 RVQLKLNASRNMEGILRGYDPFMNLVLEEGIETTKQGHRN---PVGTIVIRGNSIVML 72
>gi|440907817|gb|ELR57914.1| hypothetical protein M91_09610 [Bos grunniens mutus]
Length = 247
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K V L GR + G+LR FD F N+V++ E G +G+ VIRG +++++
Sbjct: 187 KTGVKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQ---QNNIGMVVIRGNSIIMLEA 243
Query: 61 LD 62
L+
Sbjct: 244 LE 245
>gi|321461226|gb|EFX72260.1| hypothetical protein DAPPUDRAFT_189031 [Daphnia pulex]
Length = 77
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L GR ++G+LR FD F N+V++ E + G +G+ V+RG +++++ L+
Sbjct: 21 LNGGRNIVGILRGFDPFMNLVIDETVEEVKDGSKNN---IGMVVVRGNSIIMLEALE 74
>gi|329765899|ref|ZP_08257464.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795327|ref|ZP_10378691.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
BG20]
gi|329137605|gb|EGG41876.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 78
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+L+ L+ G+ + G L FDQ N++L+ + E + G+ LG V+RG+NVV+I
Sbjct: 18 VLIKLKGGKTIRGNLLGFDQHMNLLLDSSEEIPVEGNSKS---LGTIVVRGDNVVMI 71
>gi|312385157|gb|EFR29724.1| hypothetical protein AND_23652 [Anopheles darlingi]
Length = 64
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L GR + G+LR FD F NVVL+ + E G +G+ VIRG +++L+ LD
Sbjct: 9 LNGGRVVSGILRGFDPFMNVVLDESIEECKDGTRN---NIGMVVIRGNSIILVEALD 62
>gi|392597247|gb|EIW86569.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 111
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 19/71 (26%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG-------------L 47
++L+ LR+ +KLL +++FD+ +N+VLE V +++ ++P G
Sbjct: 42 QVLISLRNNKKLLARVKAFDRHSNMVLEN------VKEMWTEVPKGKNKKPVNKDRFISK 95
Query: 48 YVIRGENVVLI 58
+RG++V+LI
Sbjct: 96 MFLRGDSVILI 106
>gi|395841395|ref|XP_003793525.1| PREDICTED: uncharacterized protein LOC100954411 [Otolemur
garnettii]
Length = 186
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
I+V L GR + G+LR FD F N+V++ E G +G+ VIRG +++++ L
Sbjct: 127 IIVKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNN---IGMVVIRGNSIIMLEAL 183
Query: 62 D 62
+
Sbjct: 184 E 184
>gi|390604110|gb|EIN13501.1| Sm-like ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 111
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 31/46 (67%), Gaps = 6/46 (13%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG 46
++L+ LR+ +KLL +++FD+ +N+VLE V +++ ++P G
Sbjct: 42 QVLISLRNNKKLLARVKAFDRHSNMVLEN------VKEMWTEVPKG 81
>gi|393247820|gb|EJD55327.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 111
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 19/71 (26%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG-------------L 47
++L+ LR+ +KLL +++FD+ N+VLE V +++ ++P G
Sbjct: 42 QVLISLRNNKKLLARVKAFDRHTNMVLEN------VKEMWTEVPKGKNKKPVNKDRFISK 95
Query: 48 YVIRGENVVLI 58
+RG++VVL+
Sbjct: 96 MFLRGDSVVLV 106
>gi|296242979|ref|YP_003650466.1| LSM family small nuclear ribonucleoprotein [Thermosphaera
aggregans DSM 11486]
gi|296095563|gb|ADG91514.1| Small nuclear ribonucleoprotein, LSM family [Thermosphaera
aggregans DSM 11486]
Length = 76
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+L+ ++D L G LRS+DQ N+VL+ E +G+ LG VIRG+ VV I +
Sbjct: 17 VLIKIKDDITLRGKLRSYDQHLNIVLDDVEE---IGEGGSTRKLGTVVIRGDTVVFISPI 73
>gi|156841174|ref|XP_001643962.1| hypothetical protein Kpol_1001p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156114593|gb|EDO16104.1| hypothetical protein Kpol_1001p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 85
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERI---IVGDLYCDIPLG-LYVIRGENVV 56
K+ V LR R+L+G+L++FD N+VL A E I + G+L + + +RG+ V
Sbjct: 17 KVYVKLRGARELVGILQAFDSHCNIVLSDAVETIYELVDGELKSNEKTSEMLFVRGDTVT 76
Query: 57 LI 58
LI
Sbjct: 77 LI 78
>gi|448122563|ref|XP_004204478.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|448124870|ref|XP_004205036.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|358249669|emb|CCE72735.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|358350017|emb|CCE73296.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
Length = 74
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
KI + L RK++G LR +D F NV L A E G+ + +G VIRG +VV I
Sbjct: 14 KISIQLNGTRKVIGTLRGYDIFLNVTLSEALEEQKDGN---KLDIGTVVIRGNSVVSIES 70
Query: 61 LD 62
L+
Sbjct: 71 LE 72
>gi|255070809|ref|XP_002507486.1| small nuclear ribonucleoprotein sm D2 [Micromonas sp. RCC299]
gi|226522761|gb|ACO68744.1| small nuclear ribonucleoprotein sm D2 [Micromonas sp. RCC299]
Length = 101
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 23/75 (30%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP---------------- 44
++L+ R+ RKLLG +++FD+ N+VLE V +L+ +IP
Sbjct: 28 QVLISCRNNRKLLGRVKAFDRHCNMVLEN------VKELWTEIPKTGKGCKKARTISKDR 81
Query: 45 -LGLYVIRGENVVLI 58
L IRG++V+L+
Sbjct: 82 FLSKMFIRGDSVILV 96
>gi|403363323|gb|EJY81404.1| Small nuclear ribonucleoprotein polypeptide G [Oxytricha
trifallax]
Length = 79
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L R + G+L+ +DQF N+VL+ A E II D + LG VIRG +VV+ LD
Sbjct: 23 LNANRHVAGVLKGYDQFLNIVLDNAIE-IINKDEKRE--LGTIVIRGNSVVMWENLD 76
>gi|149238445|ref|XP_001525099.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451696|gb|EDK45952.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 96
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD--------LYCDIPLGLYVIRG 52
++ V+ D R G L FD+ N++L + ERII +I G+ V+RG
Sbjct: 5 QVAVITTDARYFEGTLEGFDKSTNIILSKSIERIIYSKEDQENNNEENEEIESGVNVMRG 64
Query: 53 ENVVLIGELD 62
+V IGE+D
Sbjct: 65 NEIVCIGEID 74
>gi|255714250|ref|XP_002553407.1| KLTH0D16082p [Lachancea thermotolerans]
gi|238934787|emb|CAR22969.1| KLTH0D16082p [Lachancea thermotolerans CBS 6340]
Length = 81
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERI---IVGDLYCDIPLG-LYVIRGENVV 56
K+ V LR R++ G+L++FD N+VL A E I + G+L + +RG++V
Sbjct: 15 KVFVKLRGAREMTGVLQAFDSHCNIVLSNATETIYELVDGELKSSTKGSEMVFVRGDSVT 74
Query: 57 LI 58
LI
Sbjct: 75 LI 76
>gi|168045744|ref|XP_001775336.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673281|gb|EDQ59806.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 102
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP-----LGLYVIRGENVV 56
+ V L GR++ G+L+ +DQ N+VL+ A E + D LGL V RG V+
Sbjct: 19 VSVKLSGGRQVTGILKGYDQLLNLVLDEATENLRDSDDPMKTTDQIRQLGLIVCRGTAVM 78
Query: 57 LIGELDLEKEELP 69
L+ D EE+P
Sbjct: 79 LVAPTD-GTEEIP 90
>gi|321263328|ref|XP_003196382.1| hypothetical protein CGB_J0080C [Cryptococcus gattii WM276]
gi|317462858|gb|ADV24595.1| hypothetical protein CNJ03360 [Cryptococcus gattii WM276]
Length = 66
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ + L+ GR++ G+LR +D F N+V++ A E + G P G+ VIRG +V +
Sbjct: 4 RLFLHLQGGRQVSGVLRGYDMFLNLVVDNAFEELGGGQRK---PCGMVVIRGNSVSAMEL 60
Query: 61 LDLEK 65
LD ++
Sbjct: 61 LDNQR 65
>gi|213513524|ref|NP_001134580.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|209734434|gb|ACI68086.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|303659717|gb|ADM15968.1| Small nuclear ribonucleoprotein G [Salmo salar]
Length = 76
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR++ G+LR FD F N+V++ C + G + I GL VIRG +++++
Sbjct: 16 KLSLKLNGGRQVQGVLRGFDPFMNLVMD-DCLEMAPGGIQNTI--GLVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|58261590|ref|XP_568205.1| U6 snRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115921|ref|XP_773347.1| hypothetical protein CNBI2880 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255971|gb|EAL18700.1| hypothetical protein CNBI2880 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230287|gb|AAW46688.1| U6 snRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 131
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
I V GR+ G+L+ +DQ N+V++ E D LGL V+RG N+VL+
Sbjct: 37 IRVKFMGGREATGILKGYDQLMNLVMDDVVEE--YEDGRPTRSLGLVVLRGPNIVLVSPT 94
Query: 62 DLEKEELPAHMTCVSTAEIKRAQKAEKDATVLKGSMRKRMEF 103
D + +K + + + ++ S R R F
Sbjct: 95 D----------GSSGKSFLKSIRNGQSKSVNMRQSFRNRKPF 126
>gi|197127872|gb|ACH44370.1| putative small nuclear ribonucleoprotein polypeptide G
[Taeniopygia guttata]
Length = 76
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ C + G +I G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRHVQGILRGFDPFMNLVID-ECVEMAAGGQQNNI--GMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|407038130|gb|EKE38950.1| LSM domain containing protein [Entamoeba nuttalli P19]
Length = 78
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 59
+ + LR GRKL G LR+FDQ N++L E I + P+ LY IRG+ V+LI
Sbjct: 21 VFIKLRGGRKLKGKLRAFDQHLNIILTNVSE--IYQEKTRTFPV-LY-IRGDLVILIS 74
>gi|363748558|ref|XP_003644497.1| hypothetical protein Ecym_1454 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888129|gb|AET37680.1| hypothetical protein Ecym_1454 [Eremothecium cymbalariae
DBVPG#7215]
Length = 76
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLY-VIRGENVVLIG 59
K+ + L RK++G+LR +D F NVVL+ A E G + PLG + VIRG ++V +
Sbjct: 14 KLFIQLNGSRKVVGVLRGYDVFLNVVLDDALEVHKNGRKF---PLGDHTVIRGNSIVSLE 70
Query: 60 ELD 62
L+
Sbjct: 71 PLE 73
>gi|38637149|dbj|BAD03402.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 258
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 17 RSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRG-ENVVLIGELDLEKEELPA 70
+SF Q L A ER G CD+PLG+ +R ++++L G +D++ EE PA
Sbjct: 168 KSFPQLKRFELRTAFERPCYG---CDVPLGIPTVRHLQHLILGGIIDIDNEEPPA 219
>gi|374633102|ref|ZP_09705469.1| small nuclear ribonucleoprotein [Metallosphaera yellowstonensis
MK1]
gi|373524586|gb|EHP69463.1| small nuclear ribonucleoprotein [Metallosphaera yellowstonensis
MK1]
Length = 78
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+LV L+ +++ GLL+S+DQ N+VL + E I D +G VIRG+NV+LI
Sbjct: 20 VLVKLKGNKEVRGLLKSYDQHMNLVLSDSEE--IQSD-GGGKKMGTIVIRGDNVILI 73
>gi|393218655|gb|EJD04143.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 112
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 19/71 (26%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG-------------L 47
++L+ LR+ +KLL +++FD+ N+VLE V +++ ++P G
Sbjct: 43 QVLISLRNNKKLLARVKAFDRHTNMVLEN------VKEMWVEVPKGKNKKPVNKDRFISK 96
Query: 48 YVIRGENVVLI 58
+RG++V+LI
Sbjct: 97 MFLRGDSVILI 107
>gi|347522771|ref|YP_004780341.1| Like-Sm ribonucleoprotein core [Pyrolobus fumarii 1A]
gi|343459653|gb|AEM38089.1| Like-Sm ribonucleoprotein core [Pyrolobus fumarii 1A]
Length = 75
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+LV LR + G L+SFDQ N+VLE A E G LG VIRG+NVVLI
Sbjct: 17 VLVKLRGDIVVRGKLKSFDQHLNLVLEEAEEIKSDGSTR---KLGTLVIRGDNVVLI 70
>gi|302831688|ref|XP_002947409.1| hypothetical protein VOLCADRAFT_87780 [Volvox carteri f.
nagariensis]
gi|300267273|gb|EFJ51457.1| hypothetical protein VOLCADRAFT_87780 [Volvox carteri f.
nagariensis]
Length = 74
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R + G LR FDQF NVVL+ + L DI G+ VIRG ++ I
Sbjct: 16 KLSIHLNANRHVSGTLRGFDQFMNVVLDQTVDE----KLKVDI--GMVVIRGNSIQTIEA 69
Query: 61 LD 62
L+
Sbjct: 70 LE 71
>gi|255076665|ref|XP_002502006.1| predicted protein [Micromonas sp. RCC299]
gi|226517271|gb|ACO63264.1| predicted protein [Micromonas sp. RCC299]
Length = 81
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-PLGLYVIRGENV 55
K+ + L R ++G+LR FDQF N+VL+ A D+ D PLG+ V+RG +V
Sbjct: 15 KLRLKLNGNRGVVGVLRGFDQFLNLVLDEAHN-----DVGPDKEPLGMVVVRGNSV 65
>gi|187610687|gb|ACD13592.1| small nuclear ribonucleoprotein polypeptide G [Penaeus monodon]
gi|408842889|gb|AFU93450.1| small nuclear ribonucleoprotein polypeptide G [Litopenaeus
vannamei]
Length = 77
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+++ L GR + G LR FD F N+V++ E GD + +G VIRG +++++
Sbjct: 16 RVMTKLNGGRVVEGTLRGFDPFMNLVVDDGVEVRRSGD---RVRVGFVVIRGSSIIMLEA 72
Query: 61 LD 62
LD
Sbjct: 73 LD 74
>gi|346325864|gb|EGX95460.1| small nuclear ribonucleoprotein SmG [Cordyceps militaris CM01]
Length = 85
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ V L RK++G+LR +D F N+VL+ A E G+ + + L VIRG +VV++
Sbjct: 15 RLFVQLNGSRKVIGVLRGYDVFLNIVLDDAFEEREGGN-KAKLGMVLKVIRGNSVVML 71
>gi|196476795|gb|ACG76261.1| small nuclear ribonucleoprotein G [Amblyomma americanum]
Length = 77
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R + G+LR FD F N+VL+ E G+ + +G+ V+RG ++VL+
Sbjct: 16 KLSLRLNGSRVITGILRGFDPFMNLVLDETVEEAKGGEKHN---IGMVVVRGNSIVLLES 72
Query: 61 LD 62
D
Sbjct: 73 QD 74
>gi|14318502|ref|NP_116636.1| Smx2p [Saccharomyces cerevisiae S288c]
gi|730760|sp|P40204.1|RUXG_YEAST RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|499706|gb|AAB63977.1| small nuclear ribonucleoprotein E [Saccharomyces cerevisiae]
gi|559938|emb|CAA86353.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270816|gb|AAS56789.1| YFL017W-A [Saccharomyces cerevisiae]
gi|285811877|tpg|DAA12422.1| TPA: Smx2p [Saccharomyces cerevisiae S288c]
Length = 77
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG-DLYCDIPLGL-YVIRGENVVLI 58
KIL+ + RK+ G+LR +D F NVVL+ A E I G D + LGL VIRG +++ +
Sbjct: 14 KILLNINGSRKVAGILRGYDIFLNVVLDDAME--INGEDPANNHQLGLQTVIRGNSIISL 71
Query: 59 GELD 62
LD
Sbjct: 72 EALD 75
>gi|71031248|ref|XP_765266.1| small nuclear ribonucleoprotein G [Theileria parva strain Muguga]
gi|68352222|gb|EAN32983.1| small nuclear ribonucleoprotein G, putative [Theileria parva]
Length = 86
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 3 LVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
+V L R ++G+LR +D F N+VL+ A E +VG+ D LG+ V+RG +++ LD
Sbjct: 26 IVHLNGSRHVVGVLRGYDTFMNIVLDNALE--VVGEDQVD--LGVVVVRGNSILYWECLD 81
>gi|84994586|ref|XP_952015.1| small nuclear ribonucleoprotein [Theileria annulata strain
Ankara]
gi|65302176|emb|CAI74283.1| small nuclear ribonucleoprotein, putative [Theileria annulata]
Length = 82
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
V L R ++G+LR +D F N+VL+ A E +VG+ D LG+ V+RG +++ LD
Sbjct: 23 VHLNGSRHVVGVLRGYDTFMNIVLDNALE--VVGEEQVD--LGVVVVRGNSILYWECLD 77
>gi|363748022|ref|XP_003644229.1| hypothetical protein Ecym_1162 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887861|gb|AET37412.1| hypothetical protein Ecym_1162 [Eremothecium cymbalariae
DBVPG#7215]
Length = 83
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERI---IVGDLYCDIPLG-LYVIRGENVV 56
K+ V LR RKL G L++FD N+VL A E I + G+L + + +RG++V
Sbjct: 16 KVYVKLRGARKLTGTLQAFDSHCNIVLSDAEETIYELVDGNLRFETKTSEMIFVRGDSVT 75
Query: 57 LI 58
L+
Sbjct: 76 LV 77
>gi|427784695|gb|JAA57799.1| Putative small ribonucleoprotein particle protein smg
[Rhipicephalus pulchellus]
Length = 77
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R + G+LR FD F N+VL+ E G+ + +G+ V+RG ++VL+
Sbjct: 16 KLSLRLNGSRVVTGILRGFDPFMNLVLDETVEETKGGEKHN---IGMVVVRGNSIVLLES 72
Query: 61 LD 62
D
Sbjct: 73 QD 74
>gi|320592629|gb|EFX05059.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 107
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-PLGLYVIRGENVVLIG 59
+I + GR++ G+L+ FD N+VL+ A E++ D LGL VIRG ++ +
Sbjct: 4 EIYIKFNGGREVSGVLKGFDPLLNMVLDNAQEKMRNADGETKSRSLGLAVIRGTHITTLH 63
Query: 60 ELD 62
+D
Sbjct: 64 PVD 66
>gi|218200614|gb|EEC83041.1| hypothetical protein OsI_28136 [Oryza sativa Indica Group]
gi|222640057|gb|EEE68189.1| hypothetical protein OsJ_26339 [Oryza sativa Japonica Group]
Length = 247
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 17 RSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRG-ENVVLIGELDLEKEELPA 70
+SF Q L A ER G CD+PLG+ +R ++++L G +D++ EE PA
Sbjct: 157 KSFPQLKRFELRTAFERPCYG---CDVPLGIPTVRHLQHLILGGIIDIDNEEPPA 208
>gi|58382854|ref|XP_312222.2| AGAP002706-PA [Anopheles gambiae str. PEST]
gi|170033098|ref|XP_001844416.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|55242066|gb|EAA07689.2| AGAP002706-PA [Anopheles gambiae str. PEST]
gi|167873530|gb|EDS36913.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 76
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L GR + G+LR FD F NVV++ + E G +G+ VIRG +++++ LD
Sbjct: 21 LNGGRVVSGILRGFDPFMNVVVDESIEECKDGTRNN---IGMVVIRGNSIIMVEALD 74
>gi|156843124|ref|XP_001644631.1| hypothetical protein Kpol_526p26 [Vanderwaltozyma polyspora DSM
70294]
gi|156115278|gb|EDO16773.1| hypothetical protein Kpol_526p26 [Vanderwaltozyma polyspora DSM
70294]
Length = 86
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPL---GLYVIRGENVVL 57
+ ++L+ R+ G L FD F NV++E A E I CD L G ++ G N+ +
Sbjct: 20 PVWIILQSNREFTGKLVGFDDFVNVIIEDAVEYITDNHNQCDTELRHHGRMLLSGNNIAM 79
Query: 58 I 58
+
Sbjct: 80 L 80
>gi|301097686|ref|XP_002897937.1| small nuclear ribonucleoprotein G [Phytophthora infestans T30-4]
gi|262106382|gb|EEY64434.1| small nuclear ribonucleoprotein G [Phytophthora infestans T30-4]
gi|348673260|gb|EGZ13079.1| hypothetical protein PHYSODRAFT_514215 [Phytophthora sojae]
Length = 64
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVV 56
L RK+ G+LR FDQF NV L+ E + + +G+ VIRG ++V
Sbjct: 9 LNGNRKVSGVLRGFDQFMNVTLDETVEEVSATE---SNRIGMVVIRGNSIV 56
>gi|303276466|ref|XP_003057527.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461879|gb|EEH59172.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 77
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-PLGLYVIRGENVVLIG 59
K+ + L R ++G+LR FDQF N+VL+ C V D D PLG+ V+RG ++ +
Sbjct: 10 KLRLKLNGNRGVVGVLRGFDQFLNLVLD-EC----VDDSTSDKEPLGMVVVRGNSISALE 64
Query: 60 ELDLEKEELPA 70
L E +PA
Sbjct: 65 AL----EHIPA 71
>gi|221120336|ref|XP_002162004.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Hydra
magnipapillata]
Length = 76
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 9 GRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
R + G+LR FD F N+V++ E + +G+ VIRG +VVL+ LD
Sbjct: 24 NRSVTGILRGFDPFMNLVIDDTVENTSTQERNN---IGMVVIRGNSVVLMEALD 74
>gi|159471089|ref|XP_001693689.1| small nuclear ribonucleoprotein polypeptide G [Chlamydomonas
reinhardtii]
gi|158283192|gb|EDP08943.1| small nuclear ribonucleoprotein polypeptide G [Chlamydomonas
reinhardtii]
Length = 77
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R + G LR FDQF N+VL+ + L DI G+ VIRG ++ I
Sbjct: 16 KLSITLNANRHVSGTLRGFDQFMNLVLDATVDE----KLKVDI--GMVVIRGNSIQTIEA 69
Query: 61 LD 62
L+
Sbjct: 70 LE 71
>gi|321263450|ref|XP_003196443.1| U6 snRNA binding protein [Cryptococcus gattii WM276]
gi|317462919|gb|ADV24656.1| U6 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 111
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
I V GR+ G+L+ +DQ N+V++ E D LGL V+RG N+VL+
Sbjct: 37 IRVKFMGGREATGILKGYDQLMNLVMDDVVEE--YEDGRPTRSLGLVVLRGPNIVLVSPT 94
Query: 62 D 62
D
Sbjct: 95 D 95
>gi|448500333|ref|ZP_21611712.1| Like-Sm ribonucleoprotein core [Halorubrum coriense DSM 10284]
gi|445696562|gb|ELZ48648.1| Like-Sm ribonucleoprotein core [Halorubrum coriense DSM 10284]
Length = 73
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLE---GACERIIVGDLYCDIPLGL---YVIRGEN 54
+ V L+DG G+L +DQ NVV+E G +R+ GDL + + + +IRG+N
Sbjct: 9 PVTVHLKDGTTYYGVLGGYDQHMNVVIEPEDGVGDRVD-GDLDGEFAVAIEDTTIIRGDN 67
Query: 55 VVLI 58
VV I
Sbjct: 68 VVTI 71
>gi|221220698|gb|ACM09010.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|221221936|gb|ACM09629.1| Small nuclear ribonucleoprotein G [Salmo salar]
Length = 76
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR++ G+LR FD F N+V++ C + G + I G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRQVQGVLRGFDPFMNLVMD-DCLEMAPGGIQNTI--GMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|400600902|gb|EJP68570.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 255
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII--VGDLYCDIPLGLYVIRGENVVLI 58
+I V GR+++G L+ FD N+VL+ E + G+ PLGL V+RG +VLI
Sbjct: 178 QITVKFNGGREVMGTLKGFDALMNLVLDDVQETVRDEEGN-ESTRPLGLVVVRGTLLVLI 236
Query: 59 GELDLEKE 66
+D +E
Sbjct: 237 SPVDGSEE 244
>gi|448534499|ref|XP_003870814.1| hypothetical protein CORT_0F04610 [Candida orthopsilosis Co
90-125]
gi|380355169|emb|CCG24686.1| hypothetical protein CORT_0F04610 [Candida orthopsilosis]
Length = 86
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 7 RDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELDL 63
+ ++ G ++ FD++ N+V++ A E I+ G PLG +++GEN+ LI LD+
Sbjct: 34 KSHSRIQGKIQGFDEYMNLVIDEA-EEIVNGK---KTPLGKLLLKGENITLISSLDV 86
>gi|156937769|ref|YP_001435565.1| like-Sm ribonucleoprotein, core [Ignicoccus hospitalis KIN4/I]
gi|156566753|gb|ABU82158.1| Like-Sm ribonucleoprotein, core [Ignicoccus hospitalis KIN4/I]
Length = 73
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+LV LRDG K+ G L++FD N+VLE A E + D PLG +IRG+ VV + +
Sbjct: 17 VLVKLRDG-KVRGRLKTFDMHLNIVLEDAEE--VREDQTR--PLGTILIRGDGVVFVSPV 71
Query: 62 DL 63
++
Sbjct: 72 EV 73
>gi|403222297|dbj|BAM40429.1| small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 82
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 4 VLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
V L R ++G+LR +D F N+VL+ A E +VG+ + LG+ V+RG +++ LD
Sbjct: 23 VHLNGSRHVVGVLRGYDTFMNIVLDNALE--VVGE--GQVELGVVVVRGNSILYWECLD 77
>gi|386875009|ref|ZP_10117213.1| LSM domain protein [Candidatus Nitrosopumilus salaria BD31]
gi|386807169|gb|EIJ66584.1| LSM domain protein [Candidatus Nitrosopumilus salaria BD31]
Length = 74
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+L+ L+ + + G L FDQ N++L+ + E GD LG V+RG+NVV+I
Sbjct: 14 VLIKLKGSKTIRGTLLGFDQHMNLLLDSSEEIPAEGDSKS---LGTIVVRGDNVVMI 67
>gi|66811318|ref|XP_639367.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74854860|sp|Q54RX0.1|RUXG_DICDI RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|60468000|gb|EAL66011.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 85
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R + G+LR FD F N+ L+ E + + Y +G+ +IRG +++L+
Sbjct: 18 KLAIKLNGNRTVHGILRGFDTFMNIALKDTVEVVSPTEKY---EIGMVIIRGNSILLMEP 74
Query: 61 LD 62
L+
Sbjct: 75 LE 76
>gi|366991963|ref|XP_003675747.1| hypothetical protein NCAS_0C03930 [Naumovozyma castellii CBS
4309]
gi|342301612|emb|CCC69383.1| hypothetical protein NCAS_0C03930 [Naumovozyma castellii CBS
4309]
Length = 76
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGL-YVIRGENVVLIG 59
KIL+ L RK+ G+LR +D F NVV++ A E G + LG+ VIRG ++V +
Sbjct: 14 KILLQLNGSRKVAGILRGYDIFLNVVVDDAVEVSKDGSKH---QLGMQTVIRGNSIVSLE 70
Query: 60 ELD 62
LD
Sbjct: 71 ALD 73
>gi|88604287|ref|YP_504465.1| like-Sm ribonucleoprotein, core [Methanospirillum hungatei JF-1]
gi|88189749|gb|ABD42746.1| Small nuclear ribonucleoprotein, LSM family [Methanospirillum
hungatei JF-1]
Length = 80
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+L+ L+ GR++ G+L+ +D N+VL+ A E I+ G +G +IRG+NV+ I
Sbjct: 23 VLISLKGGREIKGVLQGYDVHMNLVLDKA-EEIVQGQAQS---IGTLIIRGDNVIYI 75
>gi|284413736|ref|NP_001165120.1| small nuclear ribonucleoprotein polypeptide G [Xenopus (Silurana)
tropicalis]
gi|138519693|gb|AAI35835.1| LOC100125174 protein [Xenopus (Silurana) tropicalis]
Length = 76
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ C I G I G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRHVQGILRGFDPFMNLVID-ECTEISGGGHQNTI--GMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|333986739|ref|YP_004519346.1| snRNP Sm-like protein [Methanobacterium sp. SWAN-1]
gi|333824883|gb|AEG17545.1| snRNP Sm-like protein [Methanobacterium sp. SWAN-1]
Length = 80
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++L+ L+ GR+ G+L SFD N+VL A E + G+ LG+ +IRG+N+V I
Sbjct: 23 QVLIKLKGGREFRGVLNSFDMHMNLVLNDA-EELESGE--SSRRLGVVLIRGDNIVYI 77
>gi|118101457|ref|XP_001233287.1| PREDICTED: uncharacterized protein LOC771344 isoform 1 [Gallus
gallus]
gi|126303310|ref|XP_001372569.1| PREDICTED: small nuclear ribonucleoprotein G-like [Monodelphis
domestica]
gi|395507378|ref|XP_003758002.1| PREDICTED: small nuclear ribonucleoprotein G [Sarcophilus
harrisii]
gi|387018738|gb|AFJ51487.1| Sm protein G [Crotalus adamanteus]
Length = 76
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ C + G +I G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRHVQGILRGFDPFMNLVID-ECVEMAPGGQQNNI--GMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|319401867|ref|NP_001187842.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
gi|308324118|gb|ADO29194.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
Length = 76
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ + E I G I G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRHVQGILRGFDPFMNLVVDDSIE-ISAGGQQNSI--GMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|328771114|gb|EGF81154.1| hypothetical protein BATDEDRAFT_7306, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 104
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACE--------RIIVGDLYCDIPLGLYVIRG 52
KI+V + GR++ G+L+ +D +N+VL+ A E ++ G+ +GL V R
Sbjct: 25 KIIVQFQGGRQVAGILKGYDPLSNLVLDDAEEFIRDSSDPSVLTGETRK---IGLVVTRA 81
Query: 53 ENVVLIGELDLEKE 66
+VLI D +E
Sbjct: 82 PPMVLISPFDGTEE 95
>gi|308491262|ref|XP_003107822.1| CRE-LSM-7 protein [Caenorhabditis remanei]
gi|308249769|gb|EFO93721.1| CRE-LSM-7 protein [Caenorhabditis remanei]
Length = 103
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERI-------IVGDLYCDIPLGLYVIRGE 53
+I V + GR+ G+LR FDQ N+VL+ E + +VGD PLGL V RG
Sbjct: 23 EIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVVGDETR--PLGLIVARGT 80
Query: 54 NVVLIGELD 62
+ ++ D
Sbjct: 81 AITVVSPAD 89
>gi|340344088|ref|ZP_08667220.1| Like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519229|gb|EGP92952.1| Like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 78
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+L+ L+ G+ + G L FDQ N++L+ + E G+ LG V+RG+NVV+I
Sbjct: 18 VLIKLKGGKTIRGNLLGFDQHMNLLLDSSEEIPTEGNSKS---LGTIVVRGDNVVMI 71
>gi|15790491|ref|NP_280315.1| snRNP-like protein [Halobacterium sp. NRC-1]
gi|10580991|gb|AAG19795.1| snRNP homolog [Halobacterium sp. NRC-1]
Length = 69
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD 38
+ V L+DG + G+L +DQ NVV+EG II GD
Sbjct: 26 VTVRLKDGDEFTGVLTGYDQHMNVVIEGEDTTIIRGD 62
>gi|440292437|gb|ELP85642.1| hypothetical protein EIN_409510 [Entamoeba invadens IP1]
Length = 109
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 7 RDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG-LYVIRGENVVLIGELDLEK 65
++ + G+LR+FD++ N+ L E I PLG + + GE+VVL G D K
Sbjct: 28 KERQYFTGVLRTFDKYGNLTLSEPEECIFYNGFMAKRPLGKILTVFGESVVLCGRYDKSK 87
Query: 66 EELPAHMTCVSTAEIKRAQK 85
A++ S E+++ K
Sbjct: 88 S---ANIPKKSFGELEKEYK 104
>gi|403170432|ref|XP_003329769.2| small nuclear ribonucleoprotein G [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375168717|gb|EFP85350.2| small nuclear ribonucleoprotein G [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 78
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ + L+ RKL G+LR FD F N+VL+ A E + G +GL VIRG +V I
Sbjct: 16 RLFLNLQGNRKLSGVLRGFDIFLNLVLDEAQEESLEGG--EKRKMGLIVIRGNSVSSIET 73
Query: 61 LD 62
L+
Sbjct: 74 LE 75
>gi|294657422|ref|XP_459729.2| DEHA2E09724p [Debaryomyces hansenii CBS767]
gi|199432680|emb|CAG87965.2| DEHA2E09724p [Debaryomyces hansenii CBS767]
Length = 122
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 9 GRKLLGLLRSFDQFANVVLEGACERI-------IVGDLYCDIPLGLYVIRGENVVLIGEL 61
GR+++G+L+ FDQ N+VLE E I ++ D DI G V+RG +++ I +
Sbjct: 50 GRQVIGVLKGFDQLMNLVLEDVKENIRDPEDDNVLTDKTRDI--GFVVVRGPSLLTISPV 107
Query: 62 D 62
D
Sbjct: 108 D 108
>gi|442754995|gb|JAA69657.1| Putative small nuclear ribonucleoprotein g [Ixodes ricinus]
Length = 77
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R + G+LR FD F N+VL+ E G+ + +G+ V+RG ++VL+
Sbjct: 16 KLSLRLNGSRVITGILRGFDPFMNLVLDETVEETKGGEKHD---IGMVVVRGNSIVLLES 72
Query: 61 LD 62
D
Sbjct: 73 QD 74
>gi|412986570|emb|CCO14996.1| predicted protein [Bathycoccus prasinos]
Length = 72
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCD-IPLGLYVIRGENVV 56
L R ++G+LR FDQF N+VL+ C V D + PLG+ V+RG +V+
Sbjct: 9 LNGNRGVIGILRGFDQFLNLVLD-EC----VNDSTAEKTPLGMVVVRGASVL 55
>gi|169236227|ref|YP_001689427.1| small nuclear ribonucleoprotein [Halobacterium salinarum R1]
gi|167727293|emb|CAP14079.1| RNA-binding protein Lsm [Halobacterium salinarum R1]
Length = 60
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD 38
+ V L+DG + G+L +DQ NVV+EG II GD
Sbjct: 17 VTVRLKDGDEFTGVLTGYDQHMNVVIEGEDTTIIRGD 53
>gi|449296389|gb|EMC92409.1| hypothetical protein BAUCODRAFT_287708 [Baudoinia compniacensis
UAMH 10762]
Length = 133
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACE--RIIVGDLYCDIPLGLYVIRGENVVLIG 59
I V GR++ GLL+ +DQ N+VL+ E R G+L LGL V RG +VLI
Sbjct: 56 ITVKFNGGREVTGLLKGYDQLMNLVLDNVKEITRDDEGNLST-RSLGLLVARGTLLVLIS 114
Query: 60 ELDLEKE 66
+D +E
Sbjct: 115 PVDGSEE 121
>gi|45190730|ref|NP_984984.1| AER125Cp [Ashbya gossypii ATCC 10895]
gi|44983709|gb|AAS52808.1| AER125Cp [Ashbya gossypii ATCC 10895]
gi|374108207|gb|AEY97114.1| FAER125Cp [Ashbya gossypii FDAG1]
Length = 83
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERI---IVGDLYCDIPLG-LYVIRGENVV 56
++ V LR RKL G L++FD N+VL A E I I G+L + + +RG++V
Sbjct: 16 RVYVKLRGARKLSGTLQAFDSHCNIVLSDAEETIYQLIDGELKSETKSSEMVFVRGDSVT 75
Query: 57 LI 58
L+
Sbjct: 76 LV 77
>gi|50787671|emb|CAH04406.1| small nuclear riboprotein Sm D2 [Euplotes vannus]
Length = 113
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACE 32
+ILV R+ RKLL ++FD+ N+VLE CE
Sbjct: 41 QILVNCRNNRKLLARCKAFDRHMNMVLENVCE 72
>gi|4507133|ref|NP_003087.1| small nuclear ribonucleoprotein G [Homo sapiens]
gi|13385994|ref|NP_080782.1| small nuclear ribonucleoprotein G [Mus musculus]
gi|94966887|ref|NP_001035633.1| small nuclear ribonucleoprotein G [Bos taurus]
gi|205360903|ref|NP_001128557.1| small nuclear ribonucleoprotein polypeptide G [Rattus norvegicus]
gi|301172846|ref|NP_001180369.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|356640205|ref|NP_001239260.1| small nuclear ribonucleoprotein G [Canis lupus familiaris]
gi|109461740|ref|XP_001079708.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|296223614|ref|XP_002757696.1| PREDICTED: small nuclear ribonucleoprotein G-like [Callithrix
jacchus]
gi|297667399|ref|XP_002811973.1| PREDICTED: small nuclear ribonucleoprotein G isoform 2 [Pongo
abelii]
gi|301758206|ref|XP_002914946.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ailuropoda
melanoleuca]
gi|311252444|ref|XP_003125100.1| PREDICTED: small nuclear ribonucleoprotein G-like [Sus scrofa]
gi|332226773|ref|XP_003262565.1| PREDICTED: small nuclear ribonucleoprotein G isoform 1 [Nomascus
leucogenys]
gi|338714212|ref|XP_003363026.1| PREDICTED: small nuclear ribonucleoprotein G-like [Equus
caballus]
gi|344283913|ref|XP_003413715.1| PREDICTED: small nuclear ribonucleoprotein G-like [Loxodonta
africana]
gi|348566567|ref|XP_003469073.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|354491761|ref|XP_003508023.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|392344154|ref|XP_003748887.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|402891180|ref|XP_003908832.1| PREDICTED: small nuclear ribonucleoprotein G [Papio anubis]
gi|403260478|ref|XP_003922698.1| PREDICTED: small nuclear ribonucleoprotein G [Saimiri boliviensis
boliviensis]
gi|410955001|ref|XP_003984147.1| PREDICTED: small nuclear ribonucleoprotein G [Felis catus]
gi|426223378|ref|XP_004005852.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
gi|59800216|sp|P62308.1|RUXG_HUMAN RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|59800217|sp|P62309.1|RUXG_MOUSE RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|109894862|sp|Q3ZBL0.1|RUXG_BOVIN RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|225734046|pdb|3CW1|G Chain G, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734055|pdb|3CW1|3 Chain 3, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734064|pdb|3CW1|4 Chain 4, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734073|pdb|3CW1|5 Chain 5, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|315583606|pdb|3PGW|G Chain G, Crystal Structure Of Human U1 Snrnp
gi|315583615|pdb|3PGW|J Chain J, Crystal Structure Of Human U1 Snrnp
gi|332639439|pdb|2Y9A|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639446|pdb|2Y9A|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639453|pdb|2Y9A|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639463|pdb|2Y9B|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639470|pdb|2Y9B|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639477|pdb|2Y9B|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639487|pdb|2Y9C|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639494|pdb|2Y9C|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639501|pdb|2Y9C|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639511|pdb|2Y9D|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639518|pdb|2Y9D|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639525|pdb|2Y9D|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|343781214|pdb|3S6N|G Chain G, Crystal Structure Of The Gemin2-Binding Domain Of Smn,
Gemin2 In Complex With Smd1D2FEG FROM HUMAN
gi|444302204|pdb|4F7U|G Chain G, Macromolecular Machine 6
gi|444302205|pdb|4F7U|J Chain J, Macromolecular Machine 6
gi|453055429|pdb|1VU2|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453055437|pdb|1VU2|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453055445|pdb|1VU2|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453055453|pdb|1VU2|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453055461|pdb|1VU2|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453055469|pdb|1VU2|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453055473|pdb|1VU2|4 Chain 4, The 8s Snrnp Assembly Intermediate
gi|453055485|pdb|1VU3|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453055493|pdb|1VU3|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453055501|pdb|1VU3|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453055509|pdb|1VU3|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453055517|pdb|1VU3|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453055525|pdb|1VU3|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453056017|pdb|4F77|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453056025|pdb|4F77|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453056033|pdb|4F77|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453056041|pdb|4F77|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453056049|pdb|4F77|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453056057|pdb|4F77|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453056061|pdb|4F77|4 Chain 4, The 8s Snrnp Assembly Intermediate
gi|806566|emb|CAA59689.1| Sm protein G [Homo sapiens]
gi|12652645|gb|AAH00070.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|12849786|dbj|BAB28480.1| unnamed protein product [Mus musculus]
gi|12850471|dbj|BAB28732.1| unnamed protein product [Mus musculus]
gi|18490257|gb|AAH22432.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|20380602|gb|AAH27499.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|30185984|gb|AAH51470.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|42542824|gb|AAH66302.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|47682759|gb|AAH70166.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|48145953|emb|CAG33199.1| SNRPG [Homo sapiens]
gi|62420278|gb|AAX81996.1| unknown [Homo sapiens]
gi|62948132|gb|AAH94411.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|73586825|gb|AAI03237.1| Small nuclear ribonucleoprotein polypeptide G [Bos taurus]
gi|76779243|gb|AAI06056.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|119620223|gb|EAW99817.1| small nuclear ribonucleoprotein polypeptide G, isoform CRA_a
[Homo sapiens]
gi|119620224|gb|EAW99818.1| small nuclear ribonucleoprotein polypeptide G, isoform CRA_a
[Homo sapiens]
gi|127799349|gb|AAH71880.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|148666745|gb|EDK99161.1| mCG130514, isoform CRA_a [Mus musculus]
gi|149036610|gb|EDL91228.1| rCG56468, isoform CRA_b [Rattus norvegicus]
gi|197246583|gb|AAI68750.1| Snrpg protein [Rattus norvegicus]
gi|208967440|dbj|BAG73734.1| small nuclear ribonucleoprotein polypeptide G [synthetic
construct]
gi|296477039|tpg|DAA19154.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
gi|296482417|tpg|DAA24532.1| TPA: small nuclear ribonucleoprotein G [Bos taurus]
gi|312153260|gb|ADQ33142.1| small nuclear ribonucleoprotein polypeptide G [synthetic
construct]
gi|380808500|gb|AFE76125.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|384944568|gb|AFI35889.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|410265648|gb|JAA20790.1| small nuclear ribonucleoprotein polypeptide G [Pan troglodytes]
gi|410348384|gb|JAA40796.1| small nuclear ribonucleoprotein polypeptide G [Pan troglodytes]
gi|431912604|gb|ELK14622.1| Small nuclear ribonucleoprotein G [Pteropus alecto]
Length = 76
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ E G +G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNN---IGMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|344231234|gb|EGV63116.1| LSM-domain-containing protein [Candida tenuis ATCC 10573]
Length = 88
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG----LYVIRGENVVL 57
+LV LR R++ G L+ +D N+VL A E I + D P G + IRG++V+L
Sbjct: 25 VLVKLRGAREMKGKLQGYDSHCNMVLSDATEYIYAENQ--DKPQGKSTDMVFIRGDSVIL 82
Query: 58 IGEL 61
I +
Sbjct: 83 ISPV 86
>gi|355750359|gb|EHH54697.1| hypothetical protein EGM_15585 [Macaca fascicularis]
Length = 76
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L GR + G+LR FD F N+V++ E G +G+ VIRG +++++ L+
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNN---IGMVVIRGNSIIMLEALE 74
>gi|294885997|ref|XP_002771506.1| U6 small nuclear ribonucleoprotein E, putative [Perkinsus marinus
ATCC 50983]
gi|239875210|gb|EER03322.1| U6 small nuclear ribonucleoprotein E, putative [Perkinsus marinus
ATCC 50983]
Length = 97
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD 38
+I V++R R+L+G LR FD + N+VL+ E I+ D
Sbjct: 31 RIWVIMRGDRELVGTLRGFDDYVNMVLDDVTEYTILPD 68
>gi|294463208|gb|ADE77140.1| unknown [Picea sitchensis]
Length = 98
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-----PLGLYVIRGENVV 56
+ V L GR++ G L+ +DQ N+VL+ A E + D PLGL V RG V+
Sbjct: 19 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDQDDPLKTTDQTRPLGLIVCRGTAVM 78
Query: 57 LIGELDLEKEELP 69
L+ D +E+P
Sbjct: 79 LVAPTD-GTDEIP 90
>gi|254583570|ref|XP_002497353.1| ZYRO0F03564p [Zygosaccharomyces rouxii]
gi|238940246|emb|CAR28420.1| ZYRO0F03564p [Zygosaccharomyces rouxii]
Length = 76
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLG-LYVIRGENVVLIG 59
K+L+ L RK+ G+LR +D F NVVL+ A E VG LG V+RG ++V +
Sbjct: 14 KVLLQLNGARKVAGVLRGYDLFLNVVLDDAVE---VGKDGSHHNLGSQSVVRGNSIVSLE 70
Query: 60 ELD 62
LD
Sbjct: 71 ALD 73
>gi|48477793|ref|YP_023499.1| snRNP Sm-like protein [Picrophilus torridus DSM 9790]
gi|48430441|gb|AAT43306.1| snRNP Sm-like protein [Picrophilus torridus DSM 9790]
Length = 71
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 59
K+ +LL+D R L G L +D++ N+ L+ A E G+ LG VIRG NVV I
Sbjct: 16 KVSLLLKDNRVLEGTLAGYDEYMNMTLDDAEES---GE--TQRKLGTVVIRGSNVVRIA 69
>gi|126465841|ref|YP_001040950.1| LSM family small nuclear ribonucleoprotein [Staphylothermus
marinus F1]
gi|126014664|gb|ABN70042.1| Small nuclear ribonucleoprotein, LSM family [Staphylothermus
marinus F1]
Length = 75
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+L+ L+ R++ G L+S+DQ N+VL+ A E + + LG VIRG+ V+LI +
Sbjct: 17 VLIKLKGEREVRGKLKSYDQHLNIVLDDAEE---IKEDGSTRKLGTIVIRGDTVILISPI 73
>gi|449544087|gb|EMD35061.1| hypothetical protein CERSUDRAFT_85794 [Ceriporiopsis
subvermispora B]
Length = 93
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+I V GR++ G+L+ +DQ N+VL+ E++ LGL V+RG V L+
Sbjct: 19 RIRVKFTGGREVTGVLKGYDQLLNLVLDEVEEQLQTEGELKTRSLGLVVLRGPTVTLLSP 78
Query: 61 LD 62
+D
Sbjct: 79 VD 80
>gi|399576624|ref|ZP_10770379.1| small nuclear ribonucleoprotein, lsm family [Halogranum salarium
B-1]
gi|399238068|gb|EJN58997.1| small nuclear ribonucleoprotein, lsm family [Halogranum salarium
B-1]
Length = 77
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGA--CERIIVGDLYCDIPLGLYVIRGENVVLI 58
+ V L+DG + G L +DQ NVVLE + + +G+L + +IRG+NVV I
Sbjct: 17 VTVQLKDGAEYYGTLAGYDQHMNVVLEESLDVDDDALGELDVEAVEDTTIIRGDNVVTI 75
>gi|322709843|gb|EFZ01418.1| small nuclear ribonucleoprotein (LSM1) [Metarhizium anisopliae
ARSEF 23]
Length = 146
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 10/48 (20%)
Query: 24 NVVLEGACERIIV----------GDLYCDIPLGLYVIRGENVVLIGEL 61
N+VL+ ERI Y DI G+++IRGENV+L+GE+
Sbjct: 42 NLVLQSTTERIFALKPGTDPSAPEGYYADIAHGIFLIRGENVLLLGEI 89
>gi|405119724|gb|AFR94496.1| U6 snRNA binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 131
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
I V GR+ G+L+ +DQ N+V++ E D LGL V+RG N+VL+
Sbjct: 37 IRVKFMGGREATGILKGYDQLMNLVMDDVVEE--YEDGRPTRSLGLVVLRGPNIVLVSPT 94
Query: 62 D 62
D
Sbjct: 95 D 95
>gi|167043902|gb|ABZ08590.1| putative LSM domain protein [uncultured marine crenarchaeote
HF4000_APKG3H9]
gi|167044597|gb|ABZ09270.1| putative LSM domain protein [uncultured marine crenarchaeote
HF4000_APKG7F11]
Length = 76
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+L+ L+ + + G L FDQ N++L+ A E + GD LG V+RG+NVV+I
Sbjct: 18 VLIKLKGNKTIRGNLLGFDQHMNLLLDQAEEILSDGDSNS---LGSLVVRGDNVVMI 71
>gi|328853199|gb|EGG02339.1| hypothetical protein MELLADRAFT_75479 [Melampsora larici-populina
98AG31]
Length = 78
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
++ + L+ RKL G+LR FD F N+VL+ A E + G +GL VIRG +V I
Sbjct: 16 RLFLNLQGNRKLSGVLRGFDIFLNLVLDEAQEENLEGG--EKRKMGLVVIRGNSVSSIET 73
Query: 61 LD 62
L+
Sbjct: 74 LE 75
>gi|383420999|gb|AFH33713.1| small nuclear ribonucleoprotein G [Macaca mulatta]
Length = 76
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ E G +G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNN---IGMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|409721748|ref|ZP_11269904.1| Sm ribonucleoprotein-like protein [Halococcus hamelinensis 100A6]
gi|448721880|ref|ZP_21704423.1| Sm ribonucleoprotein-like protein [Halococcus hamelinensis 100A6]
gi|445790952|gb|EMA41602.1| Sm ribonucleoprotein-like protein [Halococcus hamelinensis 100A6]
Length = 74
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ V L+DG G L +DQ NVVL+ A E D + +IRG+NVV I
Sbjct: 16 RVTVRLKDGAAYAGELGGYDQHMNVVLDPA-EEDPANDAATETVESTTIIRGDNVVSI 72
>gi|148666746|gb|EDK99162.1| mCG130514, isoform CRA_b [Mus musculus]
Length = 99
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ E G +G+ VIRG +++++
Sbjct: 39 KLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQ---QNNIGMVVIRGNSIIMLEA 95
Query: 61 LD 62
L+
Sbjct: 96 LE 97
>gi|229367628|gb|ACQ58794.1| Small nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 76
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ + E +G +G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRHVQGILRGFDPFMNLVVDDSLE---MGPGGQQNTIGMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|449463763|ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Cucumis sativus]
gi|449463765|ref|XP_004149602.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Cucumis sativus]
gi|449530742|ref|XP_004172352.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Cucumis sativus]
gi|449530744|ref|XP_004172353.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Cucumis sativus]
Length = 99
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-----PLGLYVIRGENVV 56
+ V L GR++ G L+ +DQ N+VL+ A E + D PLGL V RG V+
Sbjct: 19 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRPLGLIVCRGTAVM 78
Query: 57 LIGELDLEKE 66
L+ +D E
Sbjct: 79 LVSPVDGTDE 88
>gi|346972184|gb|EGY15636.1| hypothetical protein VDAG_06800 [Verticillium dahliae VdLs.17]
Length = 177
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 23/62 (37%)
Query: 23 ANVVLEGACERIIV-----------------------GDLYCDIPLGLYVIRGENVVLIG 59
AN+VL+ ER+ G LY DI G++++RGENV+L+G
Sbjct: 59 ANLVLQNTVERVFAPHPAPPRSDAAAATTPSPDQQPRGGLYADIKRGVFLVRGENVLLLG 118
Query: 60 EL 61
E+
Sbjct: 119 EI 120
>gi|209879283|ref|XP_002141082.1| small nuclear ribonucleoprotein G [Cryptosporidium muris RN66]
gi|209556688|gb|EEA06733.1| small nuclear ribonucleoprotein G, putative [Cryptosporidium
muris RN66]
Length = 81
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L R ++GLLR +D F N+VLE E G+ +G +IRG +VV+ LD
Sbjct: 24 LNGKRHIVGLLRGYDNFMNLVLENTVEVTSKGNK----EIGTVIIRGNSVVMWECLD 76
>gi|354610729|ref|ZP_09028685.1| Like-Sm ribonucleoprotein core [Halobacterium sp. DL1]
gi|353195549|gb|EHB61051.1| Like-Sm ribonucleoprotein core [Halobacterium sp. DL1]
Length = 60
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGD 38
+ V L+DG + G+L +DQ N+VLEG II GD
Sbjct: 16 SVTVRLKDGEEFTGVLTGYDQHMNIVLEGEDTIIIRGD 53
>gi|340368632|ref|XP_003382855.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Amphimedon queenslandica]
Length = 108
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 19/74 (25%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP------------LGLY 48
+I V + GR+ G+L+ +DQ N+VL+GA E Y P LGL
Sbjct: 27 RIRVKFQGGRETSGILKGYDQLLNLVLDGAIE-------YLQDPKDQFKLTDETRSLGLV 79
Query: 49 VIRGENVVLIGELD 62
V RG VVLI D
Sbjct: 80 VCRGTAVVLICPAD 93
>gi|67484430|ref|XP_657435.1| U6 snRNA-associated Sm-like protein LSm3 [Entamoeba histolytica
HM-1:IMSS]
gi|56474688|gb|EAL52049.1| U6 snRNA-associated Sm-like protein LSm3, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449702203|gb|EMD42886.1| U6 snrnaassociated Sm family LSm3 protein [Entamoeba histolytica
KU27]
Length = 78
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 59
+ + LR GRKL G LR+FDQ N++L E + + P+ LY IRG+ V+LI
Sbjct: 21 VFIKLRGGRKLKGKLRAFDQHLNIILTNVSE--MYQEKTRTFPV-LY-IRGDLVILIS 74
>gi|268552449|ref|XP_002634207.1| C. briggsae CBR-LSM-3 protein [Caenorhabditis briggsae]
Length = 102
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLY----------VI 50
K+ V +R+ R+L G LR+FDQ N+VL E I ++ D +Y +
Sbjct: 28 KVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETITTREVDEDTFEEIYRQSKRVVPMLFV 87
Query: 51 RGENVVLIG 59
RG++V+L+
Sbjct: 88 RGDSVILVS 96
>gi|408381788|ref|ZP_11179336.1| small nuclear ribonucleoprotein [Methanobacterium formicicum DSM
3637]
gi|407815719|gb|EKF86289.1| small nuclear ribonucleoprotein [Methanobacterium formicicum DSM
3637]
Length = 80
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++L+ L+ GR+ G+L SFD N+VL A E + G+ LG+ +IRG+N+V I
Sbjct: 23 QVLIKLKGGREFRGVLESFDMHMNLVLNDA-EELESGE--SSRRLGVVLIRGDNIVYI 77
>gi|392563452|gb|EIW56631.1| U6 snRNA-associated Sm-like protein LSm7 [Trametes versicolor
FP-101664 SS1]
Length = 94
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-PLGLYVIRGENVVLIG 59
+I V GR++ G+L+ +DQ N+VL+ E + D LGL V+RG + L+
Sbjct: 19 RIRVKFTGGREVTGILKGYDQLLNLVLDEVQENLQTPDGESTTRNLGLVVLRGPTITLLS 78
Query: 60 ELD 62
+D
Sbjct: 79 PVD 81
>gi|118398961|ref|XP_001031807.1| Sm protein [Tetrahymena thermophila]
gi|89286141|gb|EAR84144.1| Sm protein [Tetrahymena thermophila SB210]
Length = 159
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIP-------LGLYVIRGE 53
++ V ++DGR L+G +FD+ N+VL E + P LGL +IRGE
Sbjct: 14 RVRVTIQDGRMLVGTFLAFDKHLNLVLSETEEFRPIKPKTKGEPERQTKRILGLVIIRGE 73
Query: 54 NVVLI 58
N+V I
Sbjct: 74 NIVSI 78
>gi|389738918|gb|EIM80113.1| U6 snRNA-associated Sm-like protein LSm7, partial [Stereum
hirsutum FP-91666 SS1]
Length = 99
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+I V GR++ G+L+ +DQ N+VL+ E + + LGL V+RG + L+
Sbjct: 26 RIRVKFTGGREVTGVLKGYDQLLNLVLDEVQEEVQEPTPHTRS-LGLTVLRGPTITLLSP 84
Query: 61 LD 62
+D
Sbjct: 85 VD 86
>gi|320592255|gb|EFX04694.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 81
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 7/51 (13%)
Query: 26 VLEGACERIIV----GDLYCDIPLGLYVIRGENVVLIGELDLEKEELPAHM 72
VL+ A ER+I + ++PLGLY++RG+NV +G +D EEL A +
Sbjct: 18 VLQSAIERVINTPDDAEPSAEVPLGLYIVRGDNVCSVGLVD---EELDASI 65
>gi|268536210|ref|XP_002633240.1| C. briggsae CBR-LSM-7 protein [Caenorhabditis briggsae]
Length = 103
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERI-------IVGDLYCDIPLGLYVIRGE 53
+I V + GR+ G+LR FDQ N+VL+ E + ++GD PLGL V RG
Sbjct: 23 EIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVIGDETR--PLGLIVARGT 80
Query: 54 NVVLIGELD 62
+ ++ D
Sbjct: 81 AITVVSPAD 89
>gi|6320994|ref|NP_011073.1| Lsm5p [Saccharomyces cerevisiae S288c]
gi|731523|sp|P40089.1|LSM5_YEAST RecName: Full=U6 snRNA-associated Sm-like protein LSm5
gi|603386|gb|AAB64673.1| Yer146wp [Saccharomyces cerevisiae]
gi|45269457|gb|AAS56109.1| YER146W [Saccharomyces cerevisiae]
gi|151944864|gb|EDN63123.1| snRNP protein [Saccharomyces cerevisiae YJM789]
gi|190405705|gb|EDV08972.1| snRNP protein [Saccharomyces cerevisiae RM11-1a]
gi|256272052|gb|EEU07064.1| Lsm5p [Saccharomyces cerevisiae JAY291]
gi|259146073|emb|CAY79333.1| Lsm5p [Saccharomyces cerevisiae EC1118]
gi|285811779|tpg|DAA07807.1| TPA: Lsm5p [Saccharomyces cerevisiae S288c]
gi|349577808|dbj|GAA22976.1| K7_Lsm5p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299849|gb|EIW10941.1| Lsm5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 93
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERII 35
K+L++L+ R+ G L FD F NV+LE A E +I
Sbjct: 19 KVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLI 53
>gi|410930990|ref|XP_003978880.1| PREDICTED: small nuclear ribonucleoprotein G-like [Takifugu
rubripes]
gi|47207638|emb|CAF90891.1| unnamed protein product [Tetraodon nigroviridis]
Length = 76
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ E +G +G+ VIRG +++++
Sbjct: 16 KLSLKLNGGRHVQGILRGFDPFMNLVVDETLE---MGPGGQQSSIGMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|16081975|ref|NP_394385.1| hypothetical protein Ta0927 [Thermoplasma acidophilum DSM 1728]
gi|10640204|emb|CAC12056.1| hypothetical protein [Thermoplasma acidophilum]
Length = 67
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
++ +LL+D R L G+L FD++ N+VL+ E LG V+RG NVV I
Sbjct: 11 RVSLLLKDNRVLEGVLTGFDEYMNMVLDDVDE----NSENVSRKLGTVVVRGSNVVRI 64
>gi|440294421|gb|ELP87438.1| snrnp sm protein, putative [Entamoeba invadens IP1]
Length = 79
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 59
+LV LR R+L G LR+FDQ N+VL E + D P+ LY IRG+ VV++
Sbjct: 21 VLVKLRGNRQLKGKLRAFDQHLNLVLTEVTE--TYNSVSRDFPV-LY-IRGDLVVIVS 74
>gi|341881025|gb|EGT36960.1| hypothetical protein CAEBREN_23318 [Caenorhabditis brenneri]
Length = 102
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLY----------VI 50
K+ V +R+ R+L G LR+FDQ N+VL E I ++ D +Y +
Sbjct: 28 KVYVKMRNDRELRGRLRAFDQHLNMVLSDVEETITTREVDEDTFEEIYRQSKRVVPMLFV 87
Query: 51 RGENVVLIG 59
RG++V+L+
Sbjct: 88 RGDSVILVS 96
>gi|340370971|ref|XP_003384019.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Amphimedon queenslandica]
Length = 78
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L R + G+LR FD + NVVL+ E + +G+ V+RG +VVLI L+
Sbjct: 22 LNGNRTITGILRGFDPYMNVVLDDCVEE---RSSHQKFNIGMVVVRGNSVVLIEALE 75
>gi|330827552|ref|XP_003291838.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
gi|325077961|gb|EGC31640.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
Length = 78
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ V L R + G+LR FD F N+ L+ E + + Y +G+ +IRG +++L+
Sbjct: 18 KLNVKLNGNRTVQGILRGFDTFMNIALKDTVEVVSPTEKY---EIGMVLIRGNSIILMEP 74
Query: 61 LD 62
L+
Sbjct: 75 LE 76
>gi|157119614|ref|XP_001659450.1| Sm protein G, putative [Aedes aegypti]
gi|108875262|gb|EAT39487.1| AAEL008719-PA [Aedes aegypti]
Length = 76
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L GR + G+LR FD F NVVL+ + E +G+ VIRG +++++ LD
Sbjct: 21 LNGGRVVSGILRGFDPFMNVVLDESIEECKDSTRNN---IGMVVIRGNSIIMVEALD 74
>gi|284162105|ref|YP_003400728.1| Sm ribonucleoprotein-like protein [Archaeoglobus profundus DSM
5631]
gi|284012102|gb|ADB58055.1| Like-Sm ribonucleoprotein core [Archaeoglobus profundus DSM 5631]
Length = 74
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+LV L+ GR+ G+L +D N+VLE A E I G++ LG VIRG+ VV +
Sbjct: 17 VLVRLKGGREFRGILNGYDIHMNIVLENA-EEIQNGEVVRK--LGSVVIRGDTVVFV 70
>gi|397521397|ref|XP_003830783.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Pan
paniscus]
gi|410041702|ref|XP_003951296.1| PREDICTED: uncharacterized protein LOC746776 [Pan troglodytes]
gi|426359376|ref|XP_004046952.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Gorilla
gorilla gorilla]
gi|67972214|dbj|BAE02449.1| unnamed protein product [Macaca fascicularis]
Length = 44
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 18/23 (78%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFA 23
K LVLLRDGR L+G LRS DQF
Sbjct: 17 KHLVLLRDGRTLIGFLRSIDQFG 39
>gi|408404869|ref|YP_006862852.1| small nuclear ribonucleoprotein [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408365465|gb|AFU59195.1| putative small nuclear ribonucleoprotein [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 76
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+L+ L+ G+ + G L FDQ N++LE + E + G LG V+RG+NVV+I
Sbjct: 18 VLIKLKGGKVIRGNLHGFDQHMNLLLEDSVEILEEGKSND---LGTIVVRGDNVVII 71
>gi|357494377|ref|XP_003617477.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
truncatula]
gi|355518812|gb|AET00436.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
truncatula]
Length = 394
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 12/67 (17%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACE-----------RIIVGDLYCDIPLGLYV 49
++ V ++DGR+L+G +FD+ N+VL G CE + GD LGL +
Sbjct: 16 RMRVTIQDGRQLVGKFMAFDRHMNLVL-GDCEEFRKLPPAKGKKTTDGDREDRRTLGLVL 74
Query: 50 IRGENVV 56
+RGE V+
Sbjct: 75 LRGEEVI 81
>gi|294891050|ref|XP_002773395.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
gi|239878548|gb|EER05211.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
Length = 85
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L R ++G+LR +DQF N+VL+ A E + + +G+ VIRG +V++ LD
Sbjct: 28 LNGNRHVVGVLRGYDQFMNLVLDNAVELVSRTE---KKDIGMTVIRGNSVLMWECLD 81
>gi|399216804|emb|CCF73491.1| unnamed protein product [Babesia microti strain RI]
Length = 102
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDI-----PLGLYVIRGENVV 56
I V GR++ GLL+ FD +N+VL+ A E + + PLGL V RG +V
Sbjct: 25 IRVKFNGGREVRGLLKGFDVMSNLVLDEAEEFKCESESFYSFDEESRPLGLVVARGTSVA 84
Query: 57 LI 58
LI
Sbjct: 85 LI 86
>gi|366997500|ref|XP_003678512.1| hypothetical protein NCAS_0J01950 [Naumovozyma castellii CBS
4309]
gi|342304384|emb|CCC72174.1| hypothetical protein NCAS_0J01950 [Naumovozyma castellii CBS
4309]
Length = 84
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIV---GDL-YCDIPLGLYVIRGENVV 56
K+ V LR R L G L++FD N+VL A E I GDL + + +RG+ V
Sbjct: 17 KVYVKLRGARSLTGTLQAFDSHCNIVLSDAVETIYELEDGDLKSTERQSEMIFVRGDTVT 76
Query: 57 LI 58
LI
Sbjct: 77 LI 78
>gi|452822058|gb|EME29081.1| U6 snRNA-associated Sm-like protein LSm5 [Galdieria sulphuraria]
Length = 89
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACE 32
+I VL++ ++ G+LR FDQF N+VLE E
Sbjct: 21 QIWVLMKTDKEFTGILRGFDQFVNMVLEDVSE 52
>gi|440900234|gb|ELR51419.1| Small nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 76
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+L+ FD F N+V++ E G +G+ VIRG +++++
Sbjct: 16 KVSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQNN---IGMVVIRGNSIIMLEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|403214565|emb|CCK69066.1| hypothetical protein KNAG_0B06380 [Kazachstania naganishii CBS
8797]
Length = 83
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACE---RIIVGDL-YCDIPLGLYVIRGENVV 56
++ V LR R + G L++FD N+VL A E ++ G+L + P + +RG++V
Sbjct: 16 RVYVKLRGARSMAGTLQAFDSHCNIVLSDAVETRYELVDGELRSTERPSEMVFVRGDSVT 75
Query: 57 LI 58
L+
Sbjct: 76 LV 77
>gi|326427331|gb|EGD72901.1| small nuclear ribonucleoprotein G [Salpingoeca sp. ATCC 50818]
Length = 76
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L RK+ G+LR FD F N+V++ E G+ + +G+ VIRG ++ + L+
Sbjct: 21 LNANRKVSGILRGFDPFMNIVMDQTVEHKPDGE---QVKIGVVVIRGNSIATMKGLE 74
>gi|296484107|tpg|DAA26222.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
Length = 75
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+L+ FD F N+V++ E G +G+ VIRG +++++
Sbjct: 15 KVSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQNN---IGMVVIRGNSIIMLEA 71
Query: 61 LD 62
L+
Sbjct: 72 LE 73
>gi|255710607|ref|XP_002551587.1| KLTH0A02970p [Lachancea thermotolerans]
gi|238932964|emb|CAR21145.1| KLTH0A02970p [Lachancea thermotolerans CBS 6340]
Length = 76
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACE 32
K+ + L RKL+G+LR FD F NVVL+ A E
Sbjct: 14 KVYIQLNGSRKLVGVLRGFDIFLNVVLDDAVE 45
>gi|297527485|ref|YP_003669509.1| hypothetical protein Shell_1522 [Staphylothermus hellenicus DSM
12710]
gi|297256401|gb|ADI32610.1| Like-Sm ribonucleoprotein core [Staphylothermus hellenicus DSM
12710]
Length = 75
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+L+ L+ R++ G L+S+DQ N+VL+ A E + + LG VIRG+ V+LI
Sbjct: 17 VLIKLKGEREVRGKLKSYDQHLNIVLDDAEE---IRENGSTRKLGTIVIRGDTVILI 70
>gi|148698069|gb|EDL30016.1| mCG121012 [Mus musculus]
Length = 90
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+L+ FD F N+V++ E G +G+ VIRG +++++
Sbjct: 30 KLSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQNN---IGMVVIRGNSIIMLEA 86
Query: 61 LD 62
L+
Sbjct: 87 LE 88
>gi|109465326|ref|XP_001075060.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L R++ G+LR FD F N+V++ E + G +G VIRG +++++
Sbjct: 16 KLSLKLNGTRRVQGILRGFDPFTNLVIDECVEMVTSGQQNN---IGTVVIRGNSIIMLET 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|295664210|ref|XP_002792657.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278771|gb|EEH34337.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 180
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG-DLYCDIPLGLYVIRGENVVLIG 59
++ V GR++ G L+ +DQ N+VL+ E + D PLGL V RG +VLI
Sbjct: 103 EVCVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDDEDNQTTRPLGLVVARGTLLVLIS 162
Query: 60 ELDLEKE 66
+D +E
Sbjct: 163 PVDGSEE 169
>gi|225677618|gb|EEH15902.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 179
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVG-DLYCDIPLGLYVIRGENVVLIG 59
++ V GR++ G L+ +DQ N+VL+ E + D PLGL V RG +VLI
Sbjct: 102 EVCVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDDEDNQTTRPLGLVVARGTLLVLIS 161
Query: 60 ELDLEKE 66
+D +E
Sbjct: 162 PVDGSEE 168
>gi|167375897|ref|XP_001733767.1| snrnp sm protein [Entamoeba dispar SAW760]
gi|165904941|gb|EDR30063.1| snrnp sm protein, putative [Entamoeba dispar SAW760]
Length = 99
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 59
I + LR GRKL G LR+FDQ N++L E + P+ LYV RG+ VVLI
Sbjct: 42 IFIKLRGGRKLKGKLRAFDQHLNIILTDVNE--TYQEKTRTFPV-LYV-RGDLVVLIS 95
>gi|384497931|gb|EIE88422.1| hypothetical protein RO3G_13133 [Rhizopus delemar RA 99-880]
Length = 76
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
+I + L RK+ G+LR +D F N+VL+ E + + +G+ VIRG ++ ++
Sbjct: 16 RISLQLNGNRKVTGVLRGYDPFMNIVLDETVEEVSPTERNN---IGMVVIRGNSIAIMEA 72
Query: 61 LD 62
L+
Sbjct: 73 LE 74
>gi|241951220|ref|XP_002418332.1| small nuclear ribonucleoprotein G (snRNP-G), putative [Candida
dubliniensis CD36]
gi|223641671|emb|CAX43632.1| small nuclear ribonucleoprotein G (snRNP-G), putative [Candida
dubliniensis CD36]
Length = 74
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L RK++G+LR +D F N+ L A E G+ + +G VIRG ++V I
Sbjct: 14 KLSIQLNGSRKIIGILRGYDIFLNITLTDALEVDSKGE---KMNIGATVIRGNSIVSIEA 70
Query: 61 LD 62
L+
Sbjct: 71 LE 72
>gi|355567875|gb|EHH24216.1| hypothetical protein EGK_07838 [Macaca mulatta]
Length = 76
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 6 LRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 62
L GR + G+LR+FD F N+V++ E G +G+ VI+G +++++ L+
Sbjct: 21 LNGGRHVQGILRAFDPFMNLVIDEYVEMATSGQQNN---IGMVVIQGNSIIMLEALE 74
>gi|302348719|ref|YP_003816357.1| hypothetical protein ASAC_0920 [Acidilobus saccharovorans 345-15]
gi|302329131|gb|ADL19326.1| hypothetical protein ASAC_0920 [Acidilobus saccharovorans 345-15]
Length = 78
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLI 58
+ V L+ G + G+L+SFDQ N+VLE A E G LG ++RG+++V I
Sbjct: 22 VYVKLKGGEGVKGVLKSFDQHLNLVLENAEELTERGSR----SLGTVLVRGDSIVAI 74
>gi|389860536|ref|YP_006362775.1| Like-Sm ribonucleoprotein, core [Thermogladius cellulolyticus
1633]
gi|388525439|gb|AFK50637.1| Like-Sm ribonucleoprotein, core [Thermogladius cellulolyticus
1633]
Length = 76
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 2 ILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGEL 61
+L+ ++ + G LRS+DQ N+VL+ A E + GD LG VIRG+ VVLI L
Sbjct: 18 VLIKMKGEVSIRGKLRSYDQHLNIVLDDAEE--VRGD-GSSRKLGTLVIRGDTVVLISPL 74
>gi|397521832|ref|XP_003830990.1| PREDICTED: small nuclear ribonucleoprotein G [Pan paniscus]
Length = 85
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 1 KILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGE 60
K+ + L GR + G+LR FD F N+V++ E G +G+ VIRG +++++
Sbjct: 25 KLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQN---NIGMVVIRGNSIIMLEA 81
Query: 61 LD 62
L+
Sbjct: 82 LE 83
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.144 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,528,956,302
Number of Sequences: 23463169
Number of extensions: 57574878
Number of successful extensions: 125945
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 670
Number of HSP's that attempted gapping in prelim test: 124697
Number of HSP's gapped (non-prelim): 1306
length of query: 107
length of database: 8,064,228,071
effective HSP length: 75
effective length of query: 32
effective length of database: 6,304,490,396
effective search space: 201743692672
effective search space used: 201743692672
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 69 (31.2 bits)