Query 045262
Match_columns 594
No_of_seqs 84 out of 86
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 20:17:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045262.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045262hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ez3a_ a.47.2.1 (A:) Syntaxin 62.0 37 0.0027 27.3 12.3 94 216-313 11-104 (124)
2 d2ap3a1 a.24.27.1 (A:12-196) H 58.2 37 0.0027 26.2 14.5 19 167-185 5-23 (185)
3 d1f5na1 a.114.1.1 (A:284-583) 49.7 80 0.0058 27.5 14.0 24 217-240 206-229 (300)
4 d1fxkc_ a.2.5.1 (C:) Prefoldin 49.3 61 0.0045 26.1 12.3 42 218-259 4-45 (133)
5 d1fxka_ a.2.5.1 (A:) Prefoldin 44.8 69 0.005 25.3 10.7 34 216-249 9-42 (107)
6 d1i4da_ a.238.1.2 (A:) Arfapti 42.5 83 0.0061 25.6 21.3 38 357-395 153-190 (200)
7 d1qvra2 c.37.1.20 (A:149-535) 30.8 2.2E+02 0.016 27.1 12.6 98 215-314 253-359 (387)
8 d1dxxa1 a.40.1.1 (A:9-119) Dys 27.3 14 0.0011 29.5 2.4 17 379-395 7-23 (111)
9 d1aoaa1 a.40.1.1 (A:121-251) F 24.9 12 0.00087 31.1 1.4 19 377-395 1-19 (131)
10 d1fxkc_ a.2.5.1 (C:) Prefoldin 23.7 1.7E+02 0.012 23.3 11.4 34 166-199 7-40 (133)
11 d2ap3a1 a.24.27.1 (A:12-196) H 22.9 1.5E+02 0.011 22.4 19.4 26 168-193 16-41 (185)
12 d1aoaa2 a.40.1.1 (A:260-375) F 22.2 19 0.0014 28.5 2.1 12 384-395 13-24 (116)
13 d1owaa_ a.7.1.1 (A:) Spectrin 21.3 1.6E+02 0.012 23.1 8.0 15 166-180 25-39 (156)
14 d1gqea_ e.38.1.1 (A:) Polypept 21.1 2.3E+02 0.017 27.1 10.3 101 224-325 1-114 (362)
15 d1fxka_ a.2.5.1 (A:) Prefoldin 21.1 1.8E+02 0.013 22.7 10.6 25 349-373 68-92 (107)
16 d1qvra2 c.37.1.20 (A:149-535) 20.0 3.5E+02 0.025 25.6 13.7 15 164-178 185-199 (387)
No 1
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=62.00 E-value=37 Score=27.33 Aligned_cols=94 Identities=10% Similarity=0.137 Sum_probs=52.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcCCh
Q 045262 216 EGRLLNLKIESLQADNRRLEAQVADHAKTVSELEAAKTKIKLLKKKLRTEAEQNREQILAVQERVTKLQEQAHKAAAIDP 295 (594)
Q Consensus 216 Ei~~L~~kI~sLE~En~RLq~qv~e~~~v~~ELE~ar~kir~LqkKl~~~a~q~K~qi~~Lkq~v~~Lq~~E~e~~~~d~ 295 (594)
+|+.....|..|+....+|+..=.............+.++..+-..+...++..|..|-.|++.+... + ......+
T Consensus 11 eV~~Ir~~I~~i~~~v~~i~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~a~~ik~~Lk~l~~~~~~~---~-~~~~~s~ 86 (124)
T d1ez3a_ 11 QVEEIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQE---E-GLNRSSA 86 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H-TTSCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---h-ccCCCCH
Confidence 45556666666666666666443333222223345677777777788888888888888777765331 1 1123345
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 045262 296 DTQSRLQRLKVLEAEAED 313 (594)
Q Consensus 296 E~ekKlq~lkeLE~Ev~E 313 (594)
+.-.|..-+.-|=....+
T Consensus 87 ~~Rir~~q~~~L~~kf~e 104 (124)
T d1ez3a_ 87 DLRIRKTQHSTLSRKFVE 104 (124)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 554555555555544433
No 2
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=58.24 E-value=37 Score=26.19 Aligned_cols=19 Identities=26% Similarity=0.427 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 045262 167 QEVKNLKNMVQMLQDREKN 185 (594)
Q Consensus 167 ~EI~~LR~lVeeLqERE~~ 185 (594)
.+|..+...+..+.+.+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~ 23 (185)
T d2ap3a1 5 KEIKAYLKQVDKIKDDEEP 23 (185)
T ss_dssp HHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444443333
No 3
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.66 E-value=80 Score=27.48 Aligned_cols=24 Identities=25% Similarity=0.170 Sum_probs=9.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 045262 217 GRLLNLKIESLQADNRRLEAQVAD 240 (594)
Q Consensus 217 i~~L~~kI~sLE~En~RLq~qv~e 240 (594)
+.........++.+...|+.+...
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~~~~ 229 (300)
T d1f5na1 206 IEVERVKAESAQASAKMLHEMQRK 229 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333344444444444444333
No 4
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=49.35 E-value=61 Score=26.07 Aligned_cols=42 Identities=17% Similarity=0.216 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 045262 218 RLLNLKIESLQADNRRLEAQVADHAKTVSELEAAKTKIKLLK 259 (594)
Q Consensus 218 ~~L~~kI~sLE~En~RLq~qv~e~~~v~~ELE~ar~kir~Lq 259 (594)
..|...+..|+.+-..|++++..+.....|++.++.-++.|.
T Consensus 4 ~eL~~~~~~l~~~l~~l~~~i~~l~~~~~e~~~~~~~L~~l~ 45 (133)
T d1fxkc_ 4 AEIVAQLNIYQSQVELIQQQMEAVRATISELEILEKTLSDIQ 45 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334444444455555555555555555555555555555554
No 5
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=44.84 E-value=69 Score=25.32 Aligned_cols=34 Identities=18% Similarity=0.346 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 045262 216 EGRLLNLKIESLQADNRRLEAQVADHAKTVSELE 249 (594)
Q Consensus 216 Ei~~L~~kI~sLE~En~RLq~qv~e~~~v~~ELE 249 (594)
++..+...+..+.+....|++++.++..+..+|+
T Consensus 9 ~~q~lq~el~~~~~q~~~le~q~~E~~~vl~eL~ 42 (107)
T d1fxka_ 9 QFQQLQQQAQAISVQKQTVEMQINETQKALEELS 42 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555556666666666666666665
No 6
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.51 E-value=83 Score=25.64 Aligned_cols=38 Identities=16% Similarity=0.229 Sum_probs=28.6
Q ss_pred HHHHhhHHHHHHHHHHhhhhcchhhHHHHHHHHHHHHHH
Q 045262 357 RLREENTSLSKEVEKLHADKCAGVEELVYLKWINACLRY 395 (594)
Q Consensus 357 ~LR~~NedL~kQVEqLq~dRfseVEELVYLRWVNACLR~ 395 (594)
..-+.+.+|..+|+.|+..|+.++..-+ ...++|++.|
T Consensus 153 ~fe~~~~~~~~~l~~l~~~r~~~~~~~l-~~~~~~~~~f 190 (200)
T d1i4da_ 153 KYEKLRGDVAIKLKFLEENKIKVMHKQL-LLFHNAVSAY 190 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHH-HHHHHHHHHH
Confidence 3445578999999999999998765532 4567888876
No 7
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=30.78 E-value=2.2e+02 Score=27.11 Aligned_cols=98 Identities=22% Similarity=0.228 Sum_probs=45.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH-----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 045262 215 MEGRLLNLKIESLQADNRRLEAQ-----VADHAKTVSELEAAKTKIKLLKKKLRTEAEQNREQILAVQERVTKLQEQAHK 289 (594)
Q Consensus 215 ~Ei~~L~~kI~sLE~En~RLq~q-----v~e~~~v~~ELE~ar~kir~LqkKl~~~a~q~K~qi~~Lkq~v~~Lq~~E~e 289 (594)
.+++.+..+|..|+.|...|..+ ......+..++...+.+...|..+.+.+.... .++..|++++..+... .+
T Consensus 253 ~el~~ler~I~qLe~E~~aL~ke~d~~s~~rl~~le~el~~lee~~~~L~~~w~~ek~~l-~~i~~Lk~~Le~lr~~-le 330 (387)
T d1qvra2 253 EEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREIL-RKLREAQHRLDEVRRE-IE 330 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSHHHHSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HH
Confidence 46777888888888887776522 22223333344444444444433333222222 2344555555554443 22
Q ss_pred hhcCChhHHH----HHHHHHHHHHHHHHH
Q 045262 290 AAAIDPDTQS----RLQRLKVLEAEAEDL 314 (594)
Q Consensus 290 ~~~~d~E~ek----Klq~lkeLE~Ev~EL 314 (594)
.+.+...+++ ....+..+|.++..+
T Consensus 331 ~A~r~gd~e~AaeL~y~~ip~le~el~~l 359 (387)
T d1qvra2 331 LAERQYDLNRAAELRYGELPKLEAEVEAL 359 (387)
T ss_dssp HHTTTTCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHhhchHHHHHHHHHHH
Confidence 2333333222 222345566655444
No 8
>d1dxxa1 a.40.1.1 (A:9-119) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.29 E-value=14 Score=29.48 Aligned_cols=17 Identities=29% Similarity=0.630 Sum_probs=13.8
Q ss_pred hhhHHHHHHHHHHHHHH
Q 045262 379 GVEELVYLKWINACLRY 395 (594)
Q Consensus 379 eVEELVYLRWVNACLR~ 395 (594)
+|.+-+|.||||..|..
T Consensus 7 ~~Q~~~ft~WiN~~L~~ 23 (111)
T d1dxxa1 7 DVQKKTFTKWVNAQFSK 23 (111)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccc
Confidence 35567899999999973
No 9
>d1aoaa1 a.40.1.1 (A:121-251) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.94 E-value=12 Score=31.13 Aligned_cols=19 Identities=26% Similarity=0.625 Sum_probs=15.9
Q ss_pred cchhhHHHHHHHHHHHHHH
Q 045262 377 CAGVEELVYLKWINACLRY 395 (594)
Q Consensus 377 fseVEELVYLRWVNACLR~ 395 (594)
|++-|+=+|.+|||..|+.
T Consensus 1 y~e~ek~~f~~WiN~~L~~ 19 (131)
T d1aoaa1 1 YSEEEKYAFVNWINKALEN 19 (131)
T ss_dssp CCHHHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHHhcc
Confidence 4667888899999998875
No 10
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=23.66 E-value=1.7e+02 Score=23.28 Aligned_cols=34 Identities=12% Similarity=0.210 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhh
Q 045262 166 EQEVKNLKNMVQMLQDREKNLEVELLEYYGLKEQ 199 (594)
Q Consensus 166 e~EI~~LR~lVeeLqERE~~LE~ELLEyy~LKEQ 199 (594)
...+..|+..+..|+.+-..|+..+.||-.+++-
T Consensus 7 ~~~~~~l~~~l~~l~~~i~~l~~~~~e~~~~~~~ 40 (133)
T d1fxkc_ 7 VAQLNIYQSQVELIQQQMEAVRATISELEILEKT 40 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777778888888888888888887766544
No 11
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=22.85 E-value=1.5e+02 Score=22.42 Aligned_cols=26 Identities=8% Similarity=0.184 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045262 168 EVKNLKNMVQMLQDREKNLEVELLEY 193 (594)
Q Consensus 168 EI~~LR~lVeeLqERE~~LE~ELLEy 193 (594)
++..+...+..+.++=..++.++..+
T Consensus 16 ~~~~~~~~~~~~~~k~~~~e~~~~~~ 41 (185)
T d2ap3a1 16 KIKDDEEPIKTVGKKIAELDEKKKKL 41 (185)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455555555555555544443
No 12
>d1aoaa2 a.40.1.1 (A:260-375) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.22 E-value=19 Score=28.53 Aligned_cols=12 Identities=33% Similarity=0.697 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHH
Q 045262 384 VYLKWINACLRY 395 (594)
Q Consensus 384 VYLRWVNACLR~ 395 (594)
++|+|||..|+.
T Consensus 13 ~lL~WvN~~l~~ 24 (116)
T d1aoaa2 13 LLLRWANFHLEN 24 (116)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc
Confidence 799999999754
No 13
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.31 E-value=1.6e+02 Score=23.14 Aligned_cols=15 Identities=7% Similarity=0.144 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHH
Q 045262 166 EQEVKNLKNMVQMLQ 180 (594)
Q Consensus 166 e~EI~~LR~lVeeLq 180 (594)
...+..|...|..|.
T Consensus 25 ~~~~~~l~~rw~~L~ 39 (156)
T d1owaa_ 25 QERRQEVLTRYQSFK 39 (156)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344445555554443
No 14
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=21.14 E-value=2.3e+02 Score=27.06 Aligned_cols=101 Identities=12% Similarity=0.128 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH--------HHHHHhHHHHHHHHHHHHHHHH-----HHHHh
Q 045262 224 IESLQADNRRLEAQVADHAKTVSELEAAKTKIKLLKKKLR--------TEAEQNREQILAVQERVTKLQE-----QAHKA 290 (594)
Q Consensus 224 I~sLE~En~RLq~qv~e~~~v~~ELE~ar~kir~LqkKl~--------~~a~q~K~qi~~Lkq~v~~Lq~-----~E~e~ 290 (594)
|+-+.....-|...+..+..... ++..+.++.+|.+++. ..+...-.++..|+..|..++. ++.+.
T Consensus 1 ~~~l~~~i~eL~~rl~~Lr~~fD-ld~kk~Rl~ELE~~lsdP~fW~D~~kAqkl~KE~s~L~~iVe~~~~l~~~leDl~e 79 (362)
T d1gqea_ 1 INPVNNRIQDLTERSDVLRGYLD-YDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSG 79 (362)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHhcCChhhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHh
Q 045262 291 AAIDPDTQSRLQRLKVLEAEAEDLRKSNMKLQLEN 325 (594)
Q Consensus 291 ~~~d~E~ekKlq~lkeLE~Ev~ELRr~NkeLQ~EK 325 (594)
+....+-+.-.....+++.++.+|......|+...
T Consensus 80 L~Ela~ee~deel~~e~~~~l~~l~~~l~~le~~l 114 (362)
T d1gqea_ 80 LLELAVEADDEETFNEAVAELDALEEKLAQLEFRR 114 (362)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHhhhhhHHHHhh
No 15
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=21.12 E-value=1.8e+02 Score=22.69 Aligned_cols=25 Identities=20% Similarity=0.372 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHh
Q 045262 349 EALNEMSQRLREENTSLSKEVEKLH 373 (594)
Q Consensus 349 ~~i~ee~~~LR~~NedL~kQVEqLq 373 (594)
..+.+....+...-+.|.+|++.|+
T Consensus 68 ~~l~~~~e~l~~~i~~l~~q~~~l~ 92 (107)
T d1fxka_ 68 EELQEKLETLQLREKTIERQEERVM 92 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556666666666666666554
No 16
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=20.01 E-value=3.5e+02 Score=25.63 Aligned_cols=15 Identities=13% Similarity=0.315 Sum_probs=7.1
Q ss_pred chHHHHHHHHHHHHH
Q 045262 164 DCEQEVKNLKNMVQM 178 (594)
Q Consensus 164 d~e~EI~~LR~lVee 178 (594)
+.++-+.-|+.+...
T Consensus 185 ~~~~~~~il~~~~~~ 199 (387)
T d1qvra2 185 TVEETISILRGLKEK 199 (387)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH
Confidence 334445555554433
Done!